BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17504
(196 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z0S2|LHX2_MOUSE LIM/homeobox protein Lhx2 OS=Mus musculus GN=Lhx2 PE=1 SV=1
Length = 406
Score = 169 bits (428), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 126/221 (57%), Gaps = 55/221 (24%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDY-- 58
+GIS+SE+VMRARDLV+HL+CFTC +C +LT GD FGM+D ++YCR H+E L +Y
Sbjct: 120 LGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFEALLQGEYPA 179
Query: 59 ---------------------CGSAEIEQPMSPRPAPWQPT--TVQKGRPRKRKLSVDSP 95
GSA +P P+ TVQKGRPRKRK SP
Sbjct: 180 HFNHADVAAAAAAAAAAKSAGLGSAGA----NPLGLPYYNGVGTVQKGRPRKRK----SP 231
Query: 96 TPPSEDINANVMRIPSTTLEMLHSGDLSSSMESLSY-ESGAGNSSPGSGVHSHQRTKRMR 154
P DL++ +LS E+ A + S Q+TKRMR
Sbjct: 232 GP---------------------GADLAAYNAALSCNENDAEHLDRDQPYPSSQKTKRMR 270
Query: 155 TSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 195
TSFKHHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 271 TSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>sp|P50458|LHX2_HUMAN LIM/homeobox protein Lhx2 OS=Homo sapiens GN=LHX2 PE=2 SV=2
Length = 406
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 124/217 (57%), Gaps = 47/217 (21%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+GIS+SE+VMRARDLV+HL+CFTC +C +LT GD FGM+D ++YCR H+E L +Y
Sbjct: 120 LGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFEALLQGEYPA 179
Query: 61 -------------------SAEIEQPMSPRPAPWQPT--TVQKGRPRKRKLSVDSPTPPS 99
+ +P P+ TVQKGRPRKRK SP P
Sbjct: 180 HFNHADVAAAAAAAAAAKSAGLGAAGANPLGLPYYNGVGTVQKGRPRKRK----SPGP-- 233
Query: 100 EDINANVMRIPSTTLEMLHSGDLSSSMESLSY-ESGAGNSSPGSGVHSHQRTKRMRTSFK 158
DL++ +LS E+ A + S Q+TKRMRTSFK
Sbjct: 234 -------------------GADLAAYNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFK 274
Query: 159 HHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 195
HHQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 275 HHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 311
>sp|P36198|LHX2_RAT LIM/homeobox protein Lhx2 OS=Rattus norvegicus GN=Lhx2 PE=2 SV=1
Length = 426
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 121/216 (56%), Gaps = 46/216 (21%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDY-- 58
+GIS SE+VMRARDLV+HL+CFTC +C +LT GD FGM+D ++YCR H+E L +Y
Sbjct: 119 LGISESEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDSLVYCRLHFEALLQGEYPP 178
Query: 59 -----CGSAEIEQPMSPRPAPWQPT-------------TVQKGRPRKRKLSVDSPTPPSE 100
+ R W TVQKGRPRKRK SP P
Sbjct: 179 HFNHADVARAAAAAEQLRVQDWAQLGLTLGLPYYNGVGTVQKGRPRKRK----SPGP--- 231
Query: 101 DINANVMRIPSTTLEMLHSGDLSSSMESLSY-ESGAGNSSPGSGVHSHQRTKRMRTSFKH 159
DL++ +LS E+ A + S Q+TKRMRTSFKH
Sbjct: 232 ------------------GADLAAYNAALSCNENDAEHLDRDQPYPSSQKTKRMRTSFKH 273
Query: 160 HQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 195
HQLRTMKSYF IN NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 274 HQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQ 309
>sp|Q80W90|LHX9_RAT LIM/homeobox protein Lhx9 OS=Rattus norvegicus GN=Lhx9 PE=2 SV=1
Length = 388
Score = 166 bits (421), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 119/200 (59%), Gaps = 30/200 (15%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDY-- 58
+GIS+SE+VMRARD V+HL CFTC +C LT GD FGM+D ++YCR H+E L +Y
Sbjct: 129 LGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFETLLQGEYPP 188
Query: 59 -CGSAEIEQPMSPRPAPW--QPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLE 115
E+ P+ TVQKGRPRKRK SP + +N N
Sbjct: 189 QLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRK----SPALGVDIVNYN---------- 234
Query: 116 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 175
SG + + L + P S Q+TKRMRTSFKHHQLRTMKSYF IN NP
Sbjct: 235 ---SGCNENEADHLDRDQ---QPYPPS-----QKTKRMRTSFKHHQLRTMKSYFAINHNP 283
Query: 176 DAKDLKQLAQKTGLSKRVLQ 195
DAKDLKQLAQKTGL+KRVLQ
Sbjct: 284 DAKDLKQLAQKTGLTKRVLQ 303
>sp|A0JNI8|LHX9_BOVIN LIM/homeobox protein Lhx9 OS=Bos taurus GN=LHX9 PE=2 SV=2
Length = 397
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 119/200 (59%), Gaps = 30/200 (15%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDY-- 58
+GIS+SE+VMRARD V+HL CFTC +C LT GD FGM+D ++YCR H+E L +Y
Sbjct: 138 LGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFETLLQGEYPP 197
Query: 59 -CGSAEIEQPMSPRPAPW--QPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLE 115
E+ P+ TVQKGRPRKRK SP + +N N
Sbjct: 198 QLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRK----SPALGVDIVNYN---------- 243
Query: 116 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 175
SG + + L + P S Q+TKRMRTSFKHHQLRTMKSYF IN NP
Sbjct: 244 ---SGCNENEADHLDRDQ---QPYPPS-----QKTKRMRTSFKHHQLRTMKSYFAINHNP 292
Query: 176 DAKDLKQLAQKTGLSKRVLQ 195
DAKDLKQLAQKTGL+KRVLQ
Sbjct: 293 DAKDLKQLAQKTGLTKRVLQ 312
>sp|Q9NQ69|LHX9_HUMAN LIM/homeobox protein Lhx9 OS=Homo sapiens GN=LHX9 PE=1 SV=3
Length = 397
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 119/200 (59%), Gaps = 30/200 (15%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDY-- 58
+GIS+SE+VMRARD V+HL CFTC +C LT GD FGM+D ++YCR H+E L +Y
Sbjct: 138 LGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFETLLQGEYPP 197
Query: 59 -CGSAEIEQPMSPRPAPW--QPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLE 115
E+ P+ TVQKGRPRKRK SP + +N N
Sbjct: 198 QLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRK----SPALGVDIVNYN---------- 243
Query: 116 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 175
SG + + L + P S Q+TKRMRTSFKHHQLRTMKSYF IN NP
Sbjct: 244 ---SGCNENEADHLDRDQ---QPYPPS-----QKTKRMRTSFKHHQLRTMKSYFAINHNP 292
Query: 176 DAKDLKQLAQKTGLSKRVLQ 195
DAKDLKQLAQKTGL+KRVLQ
Sbjct: 293 DAKDLKQLAQKTGLTKRVLQ 312
>sp|A2I8Z7|LHX9_ASTFA LIM/homeobox protein Lhx9 OS=Astyanax fasciatus GN=lhx9 PE=2 SV=1
Length = 377
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 119/200 (59%), Gaps = 30/200 (15%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDY-- 58
+GIS+SE+VMRARD V+HL CFTC SC LT GD FGMR+ ++YCR H+E L +Y
Sbjct: 119 LGISASEMVMRARDSVYHLSCFTCTSCNKTLTTGDHFGMRENLVYCRAHFESLVQGEYHA 178
Query: 59 -CGSAEIEQPMSPRPAPW--QPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLE 115
AE+ P+ + VQKGRPRKRK P+ I+ N
Sbjct: 179 PLNYAELAAKGGGLALPYFNGASAVQKGRPRKRK-------SPAMGIDINT--------- 222
Query: 116 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 175
+SG + + L + P S Q+TK MRTSFKHHQLRTMKSYF IN NP
Sbjct: 223 -YNSGCNENDADHLDRDQ---QPYPPS-----QKTKXMRTSFKHHQLRTMKSYFAINHNP 273
Query: 176 DAKDLKQLAQKTGLSKRVLQ 195
DAKDLKQLAQKTGL+KRVLQ
Sbjct: 274 DAKDLKQLAQKTGLTKRVLQ 293
>sp|Q9WUH2|LHX9_MOUSE LIM/homeobox protein Lhx9 OS=Mus musculus GN=Lhx9 PE=1 SV=3
Length = 397
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 119/200 (59%), Gaps = 30/200 (15%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDY-- 58
+GIS+SE+VMRARD V+HL CFTC +C LT GD FGM+D ++YCR H+E L +Y
Sbjct: 138 LGISASEMVMRARDSVYHLSCFTCSTCNKTLTTGDHFGMKDSLVYCRAHFETLLQGEYPP 197
Query: 59 -CGSAEIEQPMSPRPAPW--QPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLE 115
E+ P+ TVQKGRPRKRK SP + +N N
Sbjct: 198 QLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRK----SPALGVDIVNYN---------- 243
Query: 116 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 175
SG + + L + P S Q+TKRMRTSFKHHQLRTMKSYF IN NP
Sbjct: 244 ---SGCNENEADHLDRDQ---QPYPPS-----QKTKRMRTSFKHHQLRTMKSYFAINHNP 292
Query: 176 DAKDLKQLAQKTGLSKRVLQ 195
DAKDLKQLAQKTGL+KRVLQ
Sbjct: 293 DAKDLKQLAQKTGLTKRVLQ 312
>sp|Q1LWV4|LHX9_DANRE LIM/homeobox protein Lhx9 OS=Danio rerio GN=lhx9 PE=2 SV=1
Length = 396
Score = 165 bits (417), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/200 (49%), Positives = 116/200 (58%), Gaps = 30/200 (15%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDY-- 58
+GIS+SE+VMRARD V+HL CFTC +C LT GD FGM+D ++YCR H+E L +Y
Sbjct: 138 LGISASEMVMRARDSVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCRVHFETLIQGEYHP 197
Query: 59 -CGSAEIEQPMSPRPAPW--QPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLE 115
AE+ P+ TVQKGRPRKRK P+ I+
Sbjct: 198 QLNYAELAAKGGGLALPYFNGTGTVQKGRPRKRK-------SPAMGIDI----------- 239
Query: 116 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 175
G SS + + P Q+TKRMRTSFKHHQLRTMKSYF IN NP
Sbjct: 240 ----GSYSSGCNENDADHLDRDQQP---YPPSQKTKRMRTSFKHHQLRTMKSYFAINHNP 292
Query: 176 DAKDLKQLAQKTGLSKRVLQ 195
DAKDLKQLAQKTGL+KRVLQ
Sbjct: 293 DAKDLKQLAQKTGLTKRVLQ 312
>sp|Q90881|LHX9_CHICK LIM/homeobox protein Lhx9 OS=Gallus gallus GN=LHX9 PE=2 SV=2
Length = 397
Score = 160 bits (406), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/200 (48%), Positives = 118/200 (59%), Gaps = 30/200 (15%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDY-- 58
+GIS+SE+VMRAR+ V+HL CFTC +C LT GD FGM+D ++YCR H+E L +Y
Sbjct: 138 LGISASEMVMRARESVYHLSCFTCTTCNKTLTTGDHFGMKDNLVYCRAHFESLLQGEYPP 197
Query: 59 -CGSAEIEQPMSPRPAPW--QPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLE 115
E+ P+ TVQKGRPRKRK SP + +N N
Sbjct: 198 QLSYTELAAKSGGLALPYFNGTGTVQKGRPRKRK----SPALGVDIVNYN---------- 243
Query: 116 MLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNP 175
SG + + + + P S Q+TKRM TSFKHHQLRTMKSYF IN NP
Sbjct: 244 ---SGCNENEADHMDRDQ---QPYPPS-----QKTKRMATSFKHHQLRTMKSYFAINHNP 292
Query: 176 DAKDLKQLAQKTGLSKRVLQ 195
DAKDLKQLAQKTGL+KRVLQ
Sbjct: 293 DAKDLKQLAQKTGLTKRVLQ 312
>sp|Q68EY3|LHX9_XENLA LIM/homeobox protein Lhx9 OS=Xenopus laevis GN=lhx9 PE=2 SV=1
Length = 331
Score = 160 bits (405), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 121/202 (59%), Gaps = 34/202 (16%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDY-- 58
+GIS+SE+VMRAR+ V+HL CFTC +C L+ GD FGM++ ++YCR H+E+L D+
Sbjct: 139 LGISASEMVMRARESVYHLSCFTCTTCNKTLSTGDQFGMKENLVYCRIHFELLVQGDFHQ 198
Query: 59 -CGSAEIEQPMSPRPA-PWQPT---TVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTT 113
E+ A P+ TVQKGRPRKRK SP + ++M S
Sbjct: 199 QLNYTELSAKGGGIAALPYFSNGTGTVQKGRPRKRK----SPA-----LGVDIMNYSSGC 249
Query: 114 LEMLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQ 173
E + DL + P S Q+TKRMRTSFKHHQLRTMKSYF IN
Sbjct: 250 NE--NETDLDRD-----------QTYPPS-----QKTKRMRTSFKHHQLRTMKSYFAINH 291
Query: 174 NPDAKDLKQLAQKTGLSKRVLQ 195
NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 292 NPDAKDLKQLAQKTGLTKRVLQ 313
>sp|A2PZF9|LHX9_GLARU LIM/homeobox protein Lhx9 OS=Glandirana rugosa GN=lhx9 PE=2 SV=1
Length = 379
Score = 153 bits (386), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 117/202 (57%), Gaps = 34/202 (16%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+GIS+SE+VMRAR+ V+HL CFTC +C L+ GD FGM++ ++Y R H+E+L D+
Sbjct: 120 LGISASEIVMRARESVYHLSCFTCTTCNKTLSTGDHFGMKENLVYRRAHFELLVQGDFHS 179
Query: 61 SAEIEQ------PMSPRPAPWQPT-TVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTT 113
+ +S P T VQKGRPRKRK S + +++ S
Sbjct: 180 QLNYTELSAKGGGLSALPYFTNGTGAVQKGRPRKRK---------SPALGVDIINYTSGC 230
Query: 114 LEMLHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQ 173
E + DL S P S Q+TKRMRTSFKHHQLRT KSYF IN
Sbjct: 231 NE--NDTDLDRD-----------QSYPPS-----QKTKRMRTSFKHHQLRTTKSYFAINH 272
Query: 174 NPDAKDLKQLAQKTGLSKRVLQ 195
NPDAKDLKQLAQKTGL+KRVLQ
Sbjct: 273 NPDAKDLKQLAQKTGLTKRVLQ 294
>sp|P29673|APTE_DROME Protein apterous OS=Drosophila melanogaster GN=ap PE=2 SV=1
Length = 469
Score = 153 bits (386), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 117/231 (50%), Gaps = 73/231 (31%)
Query: 3 ISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRD----- 57
ISS+ELVMRAR+LVFH++CF C C LTKGD +G+ D +IYCR HY I R D
Sbjct: 217 ISSNELVMRARNLVFHVNCFCCTVCHTPLTKGDQYGIIDALIYCRTHYSIAREGDTASSS 276
Query: 58 ----YCGSAEIEQPMS-----------------------------PRPAPWQPTTVQKGR 84
Y SA+ P + P+PA QKGR
Sbjct: 277 MSATYPYSAQFGSPHNDSSSPHSDPSRSIVPTGIFVPASHVINGLPQPA------RQKGR 330
Query: 85 PRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSGDLSSSMESLSYESGAGNSSPGSGV 144
PRKRK +DI A I DL++ GS +
Sbjct: 331 PRKRK---------PKDIEAFTANI-----------DLNTEYVDFGR---------GSHL 361
Query: 145 HSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 195
S RTKRMRTSFKHHQLRTMKSYF IN NPDAKDLKQL+QKTGL KRVLQ
Sbjct: 362 SSSSRTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLSQKTGLPKRVLQ 412
>sp|P53406|ISL2A_DANRE Insulin gene enhancer protein isl-2a OS=Danio rerio GN=isl2a PE=2
SV=1
Length = 359
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 54/196 (27%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G SS+LVMRARD V+H+ CF C C L GD F +RDE + CR + +L R G
Sbjct: 94 IGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADHGLLMERASAG 153
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
S P P + RP L + P P + + N
Sbjct: 154 S------------PISPGNIHSSRP----LHIPEPVPVRQPPHRN--------------- 182
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH-QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 179
VH ++T R+RT QL T+++ +N N PDA
Sbjct: 183 ----------------------HVHKQSEKTTRVRTVLNEKQLHTLRTCYNANPRPDALM 220
Query: 180 LKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 221 KEQLVEMTGLSPRVIR 236
>sp|Q9CXV0|ISL2_MOUSE Insulin gene enhancer protein ISL-2 OS=Mus musculus GN=Isl2 PE=1
SV=2
Length = 359
Score = 78.2 bits (191), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 84/198 (42%), Gaps = 58/198 (29%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G SSS+LVMRARD V+H+ CF C C L GD F +R+ + CR + +L R G
Sbjct: 94 VGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADHGLLLERAAAG 153
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
S P SP P P A + +P
Sbjct: 154 S-----PRSPGPLP----------------------------GARGLHLP---------- 170
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDA 177
++G+G P H H ++T R+RT QL T+++ + N PDA
Sbjct: 171 -----------DAGSGR-QPSLRTHVHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDA 218
Query: 178 KDLKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 219 LMKEQLVEMTGLSPRVIR 236
>sp|Q96A47|ISL2_HUMAN Insulin gene enhancer protein ISL-2 OS=Homo sapiens GN=ISL2 PE=1
SV=1
Length = 359
Score = 77.4 bits (189), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 84/198 (42%), Gaps = 58/198 (29%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G SSS+LVMRARD V+H+ CF C C L GD F +R+ + CR + +L R G
Sbjct: 94 VGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADHGLLLERAAAG 153
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
S P SP P P A + +P
Sbjct: 154 S-----PRSPGPLP----------------------------GARGLHLP---------- 170
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDA 177
++G+G P H H ++T R+RT QL T+++ + N PDA
Sbjct: 171 -----------DAGSGR-QPALRPHVHKQTEKTTRVRTVLNEKQLHTLRTCYAANPRPDA 218
Query: 178 KDLKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 219 LMKEQLVEMTGLSPRVIR 236
>sp|P50212|ISL2B_ONCTS Insulin gene enhancer protein ISL-2B (Fragment) OS=Oncorhynchus
tschawytscha GN=isl2b PE=2 SV=1
Length = 340
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 81/198 (40%), Gaps = 59/198 (29%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G SS+LVMRARD V+H+ CF C C L GD F +RDE + CR + +L R G
Sbjct: 76 IGFCSSDLVMRARDNVYHMECFRCSVCSRQLVPGDEFSLRDEELLCRADHGLLLERASAG 135
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
S P+SP G R + P + + N
Sbjct: 136 S-----PISP------------GNILSRSFHIADPVSVRQPPHRN--------------- 163
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQ---RTKRMRTSFKHHQLRTMKSYFNINQNPDA 177
H H+ +T R+RT QL T+++ +N N PDA
Sbjct: 164 ------------------------HVHKQSEKTTRVRTVLNEKQLHTLRTCYNANPRPDA 199
Query: 178 KDLKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 200 LMKEQLVEMTGLSPRVIR 217
>sp|P53408|ISL2A_ONCTS Insulin gene enhancer protein ISL-2A OS=Oncorhynchus tschawytscha
GN=isl2a PE=2 SV=1
Length = 358
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 55/196 (28%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G SS+LVMRARD V+H+ CF C C L GD F +RDE + CR + +L + G
Sbjct: 94 IGFCSSDLVMRARDNVYHMECFRCSVCSRHLLPGDEFSLRDEELLCRADHGLLMEQASAG 153
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
S P+SP G R L + P + + N
Sbjct: 154 S-----PLSP------------GIIHSRSLHIADPVSVRQPPHRN--------------- 181
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH-QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 179
VH ++T R+RT QL T+++ +N N PDA
Sbjct: 182 ----------------------HVHKQSEKTTRVRTVLNEKQLHTLRTCYNANPRPDALM 219
Query: 180 LKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 220 KEQLVEMTGLSPRVIR 235
>sp|P53405|ISL1_DANRE Insulin gene enhancer protein isl-1 OS=Danio rerio GN=isl1 PE=2
SV=1
Length = 349
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 58/198 (29%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G S ++ VMRAR V+H+ CF C++C L GD F +R++ ++CR ++++ R G
Sbjct: 84 IGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVV-ERATMG 142
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
+ + P+SP + RP
Sbjct: 143 AGD---PLSP---------LHPARP----------------------------------- 155
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDA 177
L + E +S P H H ++T R+RT QL T+++ +N N PDA
Sbjct: 156 -LQMAAEPISAR------QPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYNANPRPDA 208
Query: 178 KDLKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 209 LMKEQLVEMTGLSPRVIR 226
>sp|P61374|ISL1_RAT Insulin gene enhancer protein ISL-1 OS=Rattus norvegicus GN=Isl1
PE=2 SV=1
Length = 349
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 58/198 (29%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G S ++ VMRAR V+H+ CF C++C L GD F +R++ ++CR ++++ R G
Sbjct: 84 IGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVV-ERASLG 142
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
+ + P+SP + RP
Sbjct: 143 AGD---PLSP---------LHPARP----------------------------------- 155
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDA 177
L + E +S P H H ++T R+RT QL T+++ + N PDA
Sbjct: 156 -LQMAAEPISAR------QPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDA 208
Query: 178 KDLKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 209 LMKEQLVEMTGLSPRVIR 226
>sp|P61372|ISL1_MOUSE Insulin gene enhancer protein ISL-1 OS=Mus musculus GN=Isl1 PE=1
SV=1
Length = 349
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 58/198 (29%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G S ++ VMRAR V+H+ CF C++C L GD F +R++ ++CR ++++ R G
Sbjct: 84 IGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVV-ERASLG 142
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
+ + P+SP + RP
Sbjct: 143 AGD---PLSP---------LHPARP----------------------------------- 155
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDA 177
L + E +S P H H ++T R+RT QL T+++ + N PDA
Sbjct: 156 -LQMAAEPISAR------QPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDA 208
Query: 178 KDLKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 209 LMKEQLVEMTGLSPRVIR 226
>sp|P61373|ISL1_MESAU Insulin gene enhancer protein ISL-1 OS=Mesocricetus auratus GN=ISL1
PE=2 SV=1
Length = 349
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 58/198 (29%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G S ++ VMRAR V+H+ CF C++C L GD F +R++ ++CR ++++ R G
Sbjct: 84 IGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVV-ERASLG 142
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
+ + P+SP + RP
Sbjct: 143 AGD---PLSP---------LHPARP----------------------------------- 155
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDA 177
L + E +S P H H ++T R+RT QL T+++ + N PDA
Sbjct: 156 -LQMAAEPISAR------QPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDA 208
Query: 178 KDLKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 209 LMKEQLVEMTGLSPRVIR 226
>sp|P61371|ISL1_HUMAN Insulin gene enhancer protein ISL-1 OS=Homo sapiens GN=ISL1 PE=1
SV=1
Length = 349
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 58/198 (29%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G S ++ VMRAR V+H+ CF C++C L GD F +R++ ++CR ++++ R G
Sbjct: 84 IGFSKNDFVMRARSKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVV-ERASLG 142
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
+ + P+SP + RP
Sbjct: 143 AGD---PLSP---------LHPARP----------------------------------- 155
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDA 177
L + E +S P H H ++T R+RT QL T+++ + N PDA
Sbjct: 156 -LQMAAEPISAR------QPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDA 208
Query: 178 KDLKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 209 LMKEQLVEMTGLSPRVIR 226
>sp|P50211|ISL1_CHICK Insulin gene enhancer protein ISL-1 OS=Gallus gallus GN=ISL1 PE=2
SV=1
Length = 349
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 58/198 (29%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G S ++ VMRAR V+H+ CF C++C L GD F +R++ ++CR ++++ R G
Sbjct: 84 IGFSKNDFVMRARAKVYHIECFRCVACSRQLIPGDEFALREDGLFCRADHDVV-ERASLG 142
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
+ + P+SP + RP
Sbjct: 143 AGD---PLSP---------LHPARP----------------------------------- 155
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH---QRTKRMRTSFKHHQLRTMKSYFNINQNPDA 177
L + E +S P H H ++T R+RT QL T+++ + N PDA
Sbjct: 156 -LQMAAEPISAR------QPALRPHVHKQPEKTTRVRTVLNEKQLHTLRTCYAANPRPDA 208
Query: 178 KDLKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 209 LMKEQLVEMTGLSPRVIR 226
>sp|P53409|ISL3_ONCTS Insulin gene enhancer protein ISL-3 OS=Oncorhynchus tschawytscha
GN=isl3 PE=2 SV=1
Length = 363
Score = 67.8 bits (164), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 84/196 (42%), Gaps = 54/196 (27%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G SSS+LVMRARD V+H+ CF C C L GD F +RDE E+L D+
Sbjct: 94 LGFSSSDLVMRARDNVYHIECFRCSVCSRQLLPGDEFSLRDE--------ELLCRADHSL 145
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
E + S SP P I++N LH
Sbjct: 146 LME-------------------------RTSAGSPISPGH-IHSN---------RSLH-- 168
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSH-QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKD 179
L+ E + + VH ++T R+RT QL T+++ +N N PDA
Sbjct: 169 --------LAAEPVTVRAPHRNHVHKQSEKTTRVRTVLNEKQLHTLRTCYNANPRPDALM 220
Query: 180 LKQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 221 REQLVEMTGLSPRVIR 236
>sp|P53410|ISL2_CHICK Insulin gene enhancer protein ISL-2 (Fragment) OS=Gallus gallus
GN=ISL2 PE=2 SV=1
Length = 319
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 74/194 (38%), Gaps = 56/194 (28%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCGS 61
SSS+LVMRARD V+HL CF C +CG L GD F LR RD
Sbjct: 58 AFSSSDLVMRARDHVYHLECFRCAACGRQLLPGDQF--------------CLRERDLLCR 103
Query: 62 AEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSGD 121
A+ P P PR SP PP + V P H
Sbjct: 104 ADHGPP---------PDGAAARGPR-------SPAPPPAHLAEPVPGRPPGPRPQSHK-- 145
Query: 122 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 181
+ ++T R+RT QL T+++ + N PDA +
Sbjct: 146 ------------------------AAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKE 181
Query: 182 QLAQKTGLSKRVLQ 195
QL + TGLS RV++
Sbjct: 182 QLVEMTGLSPRVIR 195
>sp|P63007|LHX1_RAT LIM/homeobox protein Lhx1 OS=Rattus norvegicus GN=Lhx1 PE=2 SV=1
Length = 406
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 39/195 (20%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIY-CRPHYEILRHRDYCG 60
GIS S+LV RAR VFHL+CFTC+ C L+ G+ + DE + C+ DY
Sbjct: 69 GISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK--------EDYLS 120
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
++ + + S A TT LS DS P +D
Sbjct: 121 NSSVAKENSLHSA----TTGS-----DPSLSPDSQDPSQDDAK----------------- 154
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
S ++S + G N + + + +R RT+ K QL T+K+ F P
Sbjct: 155 --DSESANVSDKEGGSNENDDQNLGAKRRGP--RTTIKAKQLETLKAAFAATPKPTRHIR 210
Query: 181 KQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 211 EQLAQETGLNMRVIQ 225
>sp|P63006|LHX1_MOUSE LIM/homeobox protein Lhx1 OS=Mus musculus GN=Lhx1 PE=1 SV=1
Length = 406
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 39/195 (20%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIY-CRPHYEILRHRDYCG 60
GIS S+LV RAR VFHL+CFTC+ C L+ G+ + DE + C+ DY
Sbjct: 69 GISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK--------EDYLS 120
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
++ + + S A TT LS DS P +D
Sbjct: 121 NSSVAKENSLHSA----TTGS-----DPSLSPDSQDPSQDDAK----------------- 154
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
S ++S + G N + + + +R RT+ K QL T+K+ F P
Sbjct: 155 --DSESANVSDKEGGSNENDDQNLGAKRRGP--RTTIKAKQLETLKAAFAATPKPTRHIR 210
Query: 181 KQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 211 EQLAQETGLNMRVIQ 225
>sp|P63008|LHX1_MESAU LIM/homeobox protein Lhx1 OS=Mesocricetus auratus GN=Lhx1 PE=2 SV=1
Length = 406
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 39/195 (20%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIY-CRPHYEILRHRDYCG 60
GIS S+LV RAR VFHL+CFTC+ C L+ G+ + DE + C+ DY
Sbjct: 69 GISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK--------EDYLS 120
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
++ + + S A TT LS DS P +D
Sbjct: 121 NSSVAKENSLHSA----TTGS-----DPSLSPDSQDPSQDDAK----------------- 154
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
S ++S + G N + + + +R RT+ K QL T+K+ F P
Sbjct: 155 --DSESANVSDKEGGSNENDDQNLGAKRRGP--RTTIKAKQLETLKAAFAATPKPTRHIR 210
Query: 181 KQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 211 EQLAQETGLNMRVIQ 225
>sp|Q5IS89|LHX1_SAIBB LIM/homeobox protein Lhx1 OS=Saimiri boliviensis boliviensis
GN=LHX1 PE=2 SV=1
Length = 406
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 39/195 (20%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIY-CRPHYEILRHRDYCG 60
GIS S+LV RAR VFHL+CFTC+ C L+ G+ + DE + C+ DY
Sbjct: 69 GISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK--------EDYLS 120
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
++ + + S A TT LS DS P +D
Sbjct: 121 NSSVAKENSLHSA----TTGS-----DPSLSPDSQDPSQDDAK----------------- 154
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
S ++S + G N + + + +R RT+ K QL T+K+ F P
Sbjct: 155 --DSESANVSDKEGGSNENDDQNLGAKRRGP--RTTIKAKQLETLKAAFAATPKPTRHIR 210
Query: 181 KQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 211 EQLAQETGLNMRVIQ 225
>sp|Q5IS44|LHX1_PANTR LIM/homeobox protein Lhx1 OS=Pan troglodytes GN=LHX1 PE=2 SV=1
Length = 406
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 39/195 (20%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIY-CRPHYEILRHRDYCG 60
GIS S+LV RAR VFHL+CFTC+ C L+ G+ + DE + C+ DY
Sbjct: 69 GISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK--------EDYLS 120
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
++ + + S A TT LS DS P +D
Sbjct: 121 NSSVAKENSLHSA----TTGS-----DPSLSPDSQDPSQDDAK----------------- 154
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
S ++S + G N + + + +R RT+ K QL T+K+ F P
Sbjct: 155 --DSESANVSDKEGGSNENDDQNLGAKRRGP--RTTIKAKQLETLKAAFAATPKPTRHIR 210
Query: 181 KQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 211 EQLAQETGLNMRVIQ 225
>sp|O88609|LMX1B_MOUSE LIM homeobox transcription factor 1-beta OS=Mus musculus GN=Lmx1b
PE=2 SV=2
Length = 372
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 81/195 (41%), Gaps = 54/195 (27%)
Query: 3 ISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCGSA 62
I+ +E VMRA + V+HL CF C C L KGD F +++ + C+ YE + +D S
Sbjct: 99 IAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE--KEKDLLSS- 155
Query: 63 EIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSGDL 122
+SP +S + SED GD+
Sbjct: 156 -----VSPD---------------------ESDSVKSED----------------EDGDM 173
Query: 123 SSSMESLSYESGAGNSSPGSGVHSH--QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
+ G G+ S GSG +R KR RT Q R K+ F ++ P K
Sbjct: 174 KPA-------KGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 226
Query: 181 KQLAQKTGLSKRVLQ 195
+ LA +TGLS RV+Q
Sbjct: 227 ETLAAETGLSVRVVQ 241
>sp|O60663|LMX1B_HUMAN LIM homeobox transcription factor 1-beta OS=Homo sapiens GN=LMX1B
PE=1 SV=2
Length = 379
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 81/195 (41%), Gaps = 54/195 (27%)
Query: 3 ISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCGSA 62
I+ +E VMRA + V+HL CF C C L KGD F +++ + C+ YE + +D S
Sbjct: 99 IAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDYE--KEKDLLSSV 156
Query: 63 EIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSGDL 122
+P + +V+ SED GD+
Sbjct: 157 ----------SPDESDSVK-----------------SED----------------EDGDM 173
Query: 123 SSSMESLSYESGAGNSSPGSGVHSH--QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
+ G G+ S GSG +R KR RT Q R K+ F ++ P K
Sbjct: 174 KPA-------KGQGSQSKGSGDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVR 226
Query: 181 KQLAQKTGLSKRVLQ 195
+ LA +TGLS RV+Q
Sbjct: 227 ETLAAETGLSVRVVQ 241
>sp|P37137|LHX5_XENLA LIM/homeobox protein Lhx5 OS=Xenopus laevis GN=lhx5 PE=1 SV=2
Length = 402
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 44/198 (22%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIY-CRPHYEILRHRDYC 59
+GIS S+LV +AR+ VFHL+CFTC+ C L+ G+ + DE + C+ DY
Sbjct: 69 LGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCK--------EDYI 120
Query: 60 GSAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHS 119
++ +++ + R LS D P I + E HS
Sbjct: 121 SASSLKES----------SLNSVSSCTDRSLSPDIQDP-----------IQDESKETDHS 159
Query: 120 GDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRM--RTSFKHHQLRTMKSYFNINQNPDA 177
SS E+ + E+ NS TKR RT+ K QL T+K+ F P
Sbjct: 160 --TSSDKETANNENEEQNSG----------TKRRGPRTTIKAKQLETLKAAFIATPKPTR 207
Query: 178 KDLKQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 208 HIREQLAQETGLNMRVIQ 225
>sp|Q04650|LMX1A_MESAU LIM homeobox transcription factor 1-alpha OS=Mesocricetus auratus
GN=LMX1A PE=2 SV=1
Length = 382
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 74/194 (38%), Gaps = 53/194 (27%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCGS 61
I+ +E VMRA+ V+HL CF C C L KGD F +++ + C+ YE R
Sbjct: 100 AIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKEREL----- 154
Query: 62 AEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSGD 121
LS+ SP D
Sbjct: 155 ----------------------------LSLVSPAASDSG-----------------KSD 169
Query: 122 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 181
S+ ++ +G G S G H+R KR RT Q R K+ F ++ P K +
Sbjct: 170 DEESLCKSAHGAGKGTSEDGK---DHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRE 226
Query: 182 QLAQKTGLSKRVLQ 195
LA +TGLS RV+Q
Sbjct: 227 TLAAETGLSVRVVQ 240
>sp|P53407|ISL2B_DANRE Insulin gene enhancer protein isl-2b OS=Danio rerio GN=isl2b PE=2
SV=1
Length = 358
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 79/195 (40%), Gaps = 52/195 (26%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G SSS+LVMRARD V+H+ CF C C L GD F +RDE + CR + + R G
Sbjct: 94 LGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSVRDEELLCRADHGLALERGPGG 153
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
S P+SP G R L + + P + + H
Sbjct: 154 S-----PLSP------------GNIHTRGLHMAAD--------------PVSVRQTPHRN 182
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
+ E + R + + + H LRT +N N PDA
Sbjct: 183 HVHKQSEKTT------------------RVRTVLNEKQLHTLRTC---YNANPRPDALMK 221
Query: 181 KQLAQKTGLSKRVLQ 195
+QL + TGLS RV++
Sbjct: 222 EQLVEMTGLSPRVIR 236
>sp|Q9JKU8|LMX1A_MOUSE LIM homeobox transcription factor 1-alpha OS=Mus musculus GN=Lmx1a
PE=2 SV=1
Length = 382
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 74/194 (38%), Gaps = 53/194 (27%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCGS 61
I+ +E VMRA+ V+HL CF C C L KGD F +++ + C+ YE R
Sbjct: 100 AIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKEREL----- 154
Query: 62 AEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSGD 121
LS+ SP D
Sbjct: 155 ----------------------------LSLVSPAASDSG-----------------KSD 169
Query: 122 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 181
S+ ++ +G G S G H+R KR RT Q R K+ F ++ P K +
Sbjct: 170 DEESLCKSAHGAGKGASEDGK---DHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRE 226
Query: 182 QLAQKTGLSKRVLQ 195
LA +TGLS RV+Q
Sbjct: 227 TLAAETGLSVRVVQ 240
>sp|Q8TE12|LMX1A_HUMAN LIM homeobox transcription factor 1-alpha OS=Homo sapiens GN=LMX1A
PE=2 SV=1
Length = 382
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 79/194 (40%), Gaps = 53/194 (27%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCGS 61
I+ +E VMRA+ V+HL CF C C L KGD F +++ + C+ YE
Sbjct: 100 AIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYE---------- 149
Query: 62 AEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSGD 121
++R+L + +P + D + D
Sbjct: 150 ------------------------KEREL-LSLVSPAASDSGKS---------------D 169
Query: 122 LSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 181
S+ ++ +G G + G H+R KR RT Q R K+ F ++ P K +
Sbjct: 170 DEESLCKSAHGAGKGTAEEG---KDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRE 226
Query: 182 QLAQKTGLSKRVLQ 195
LA +TGLS RV+Q
Sbjct: 227 TLAAETGLSVRVVQ 240
>sp|P48742|LHX1_HUMAN LIM/homeobox protein Lhx1 OS=Homo sapiens GN=LHX1 PE=1 SV=2
Length = 406
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 86/199 (43%), Gaps = 47/199 (23%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIY-CRPHYEILRHRDYCG 60
GIS S+LV RAR VFHL+CFTC+ C L+ G+ + DE + C+ DY
Sbjct: 69 GISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK--------EDYLS 120
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDI----NANVMRIPSTTLEM 116
++ + + S A TT LS DS P +D +ANV
Sbjct: 121 NSSVAKENSLHSA----TTGS-----DPSLSPDSQDPSQDDAKDSESANV---------- 161
Query: 117 LHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPD 176
S + S E+ GA P RT+ K QL T+K+ F P
Sbjct: 162 --SDKEAGSNENDDQNLGAKRRGP-------------RTTIKAKQLETLKAAFAATPKPT 206
Query: 177 AKDLKQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 207 RHIREQLAQETGLNMRVIQ 225
>sp|Q8IRC7|AWH_DROME LIM/homeobox protein Awh OS=Drosophila melanogaster GN=Awh PE=1
SV=1
Length = 275
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHY 50
GIS+S+ V RAR+LVFHL CF C CG L+ G+ F + D+ + C+ HY
Sbjct: 75 GISASDWVRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHY 123
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 29/199 (14%)
Query: 5 SSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCGSAEI 64
S + +H HC C C L + +R+ +YC+ Y +++ G+
Sbjct: 16 SDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYS----KNF-GAKCS 70
Query: 65 EQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINA--------NVMRIPSTTLEM 116
+ + W V++ R L+ + ++ + + + LE
Sbjct: 71 KCCRGISASDW----VRRARELVFHLACFACDQCGRQLSTGEQFALMDDRVLCKAHYLET 126
Query: 117 LHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPD 176
+ G SS G G H +TKR+RT+F QL+ +++ F I+ NPD
Sbjct: 127 VEGGTTSSD-----------EGCDGDGYHK-SKTKRVRTTFTEEQLQVLQANFQIDSNPD 174
Query: 177 AKDLKQLAQKTGLSKRVLQ 195
+DL+++A TGLSKRV Q
Sbjct: 175 GQDLERIASVTGLSKRVTQ 193
>sp|P61376|LHX5_RAT LIM/homeobox protein Lhx5 OS=Rattus norvegicus GN=Lhx5 PE=2 SV=1
Length = 402
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 40/195 (20%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKG-DLFGMRDEMIYCRPHYEILRHRDYCG 60
GIS S+LV +AR VFHL+CFTC+ C L+ G +L+ + + C+ DY
Sbjct: 70 GISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK--------DDYLS 121
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
S+ ++ + + R LS D P +D P T S
Sbjct: 122 SSSLK----------EGSLNSVSSCTDRSLSPDLQDPLQDD--------PKETDNSTSSD 163
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
+++ E+ SG P RT+ K QL T+K+ F P
Sbjct: 164 KETANNENEEQNSGTKRRGP-------------RTTIKAKQLETLKAAFAATPKPTRHIR 210
Query: 181 KQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 211 EQLAQETGLNMRVIQ 225
>sp|P61375|LHX5_MOUSE LIM/homeobox protein Lhx5 OS=Mus musculus GN=Lhx5 PE=2 SV=1
Length = 402
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 40/195 (20%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKG-DLFGMRDEMIYCRPHYEILRHRDYCG 60
GIS S+LV +AR VFHL+CFTC+ C L+ G +L+ + + C+ DY
Sbjct: 70 GISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK--------DDYLS 121
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
S+ ++ + + R LS D P +D P T S
Sbjct: 122 SSSLK----------EGSLNSVSSCTDRSLSPDLQDPLQDD--------PKETDNSTSSD 163
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
+++ E+ SG P RT+ K QL T+K+ F P
Sbjct: 164 KETANNENEEQNSGTKRRGP-------------RTTIKAKQLETLKAAFAATPKPTRHIR 210
Query: 181 KQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 211 EQLAQETGLNMRVIQ 225
>sp|Q9H2C1|LHX5_HUMAN LIM/homeobox protein Lhx5 OS=Homo sapiens GN=LHX5 PE=2 SV=1
Length = 402
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 40/195 (20%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKG-DLFGMRDEMIYCRPHYEILRHRDYCG 60
GIS S+LV +AR VFHL+CFTC+ C L+ G +L+ + + C+ DY
Sbjct: 70 GISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK--------DDYLS 121
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
S +++++G D P D+ + P T S
Sbjct: 122 S----------------SSLKEGSLNSVSSCTDRSLSP--DLQDALQDDPKETDNSTSSD 163
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDL 180
+++ E+ SG P RT+ K QL T+K+ F P
Sbjct: 164 KETANNENEEQNSGTKRRGP-------------RTTIKAKQLETLKAAFAATPKPTRHIR 210
Query: 181 KQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 211 EQLAQETGLNMRVIQ 225
>sp|P53411|LHX1_CHICK LIM/homeobox protein Lhx1 OS=Gallus gallus GN=LHX1 PE=2 SV=1
Length = 406
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 85/199 (42%), Gaps = 47/199 (23%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIY-CRPHYEILRHRDYCG 60
GIS S+LV RAR VFHL+CFTC+ C L+ G+ + DE + C+ DY
Sbjct: 69 GISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCK--------EDYLN 120
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDI----NANVMRIPSTTLEM 116
++ + S A TT LS DS P +D +ANV
Sbjct: 121 NSNTAKENSLHSA----TTGS-----DPSLSPDSQDPSQDDAKDSESANV---------- 161
Query: 117 LHSGDLSSSMESLSYESGAGNSSPGSGVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPD 176
S + S E+ GA P RT+ K QL T+K+ F P
Sbjct: 162 --SDKETGSNENDDQNLGAKRRGP-------------RTTIKAKQLETLKAAFAATPKPT 206
Query: 177 AKDLKQLAQKTGLSKRVLQ 195
+QLAQ+TGL+ RV+Q
Sbjct: 207 RHIREQLAQETGLNMRVIQ 225
>sp|P50480|ISL2_RAT Insulin gene enhancer protein ISL-2 OS=Rattus norvegicus GN=Isl2
PE=1 SV=1
Length = 360
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 37/61 (60%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCG 60
+G SSS+LVMRARD V+H+ CF C C L GD F +R+ + CR + +L R G
Sbjct: 94 VGFSSSDLVMRARDSVYHIECFRCSVCSRQLLPGDEFSLREHELLCRADHGLLLERAAAG 153
Query: 61 S 61
S
Sbjct: 154 S 154
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 132 ESGAGNS-SPGSGVHSH-QRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGL 189
++G+G S + VH ++T R+RT QL T+++ + N PDA +QL + TGL
Sbjct: 172 DAGSGQQVSLRTHVHKQAEKTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGL 231
Query: 190 SKRVLQ 195
S RV++
Sbjct: 232 SPRVIR 237
>sp|O97581|LHX3_PIG LIM/homeobox protein Lhx3 (Fragment) OS=Sus scrofa GN=LHX3 PE=2
SV=1
Length = 383
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFG-MRDEMIYCRPHYEILRHRD 57
+GI +++V RA+D V+HLHCF C+ C L GD F M D + C+ YE + R+
Sbjct: 80 LGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQRE 137
Score = 37.4 bits (85), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 150 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 195
KR RT+ QL T+KS +N + P +QL+ +TGL RV+Q
Sbjct: 142 AKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 187
>sp|Q68G74|LHX8_HUMAN LIM/homeobox protein Lhx8 OS=Homo sapiens GN=LHX8 PE=2 SV=2
Length = 356
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 9 VMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCGSAEIEQPM 68
+++ DL +H+ C +C C L + ++D+ I+C+ Y R Y G+
Sbjct: 87 LLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY----FRRY-GTRCSRCGR 141
Query: 69 SPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINAN--VMRIPSTTLEMLHSGDLSSSM 126
W V++ + L+ + ++ + L +H + ++
Sbjct: 142 HIHSTDW----VRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYDCMLDNL 197
Query: 127 ESLSYESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 181
+ E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L+
Sbjct: 198 KR-EVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQ 256
Query: 182 QLAQKTGLSKRVLQ 195
+LA++TGLS+RV+Q
Sbjct: 257 KLAERTGLSRRVIQ 270
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 3 ISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEIL 53
I S++ V RA+ V+HL CF C SC L+ G+ F + +E + CR HY+ +
Sbjct: 143 IHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYDCM 193
>sp|P52889|LHX5_DANRE LIM/homeobox protein Lhx5 OS=Danio rerio GN=lhx5 PE=2 SV=1
Length = 399
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 85/202 (42%), Gaps = 54/202 (26%)
Query: 2 GISSSELVMRARDLVFHLHCFTCISCGILLTKG-DLFGMRDEMIYCRPHYEILRHRDYCG 60
GIS S+LV RAR VFHL+CFTC+ C L+ G +L+ + + C+ DY
Sbjct: 70 GISPSDLVRRARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCK--------EDYLS 121
Query: 61 SAEIEQPMSPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINANVMRIPSTTLEMLHSG 120
++ I++ N+ + S T L S
Sbjct: 122 ASAIKE-------------------------------------VNLNSVSSCTDRSL-SP 143
Query: 121 DLSSSMESLSYESGAGNSSPGSGVHSHQR-----TKRM--RTSFKHHQLRTMKSYFNINQ 173
DL ++ + E+ SS ++ TKR RT+ K QL T+K+ F
Sbjct: 144 DLPDQIQDDTKETDNSTSSDKDTNNNENEEQNSCTKRRGPRTTIKAKQLETLKAAFVATP 203
Query: 174 NPDAKDLKQLAQKTGLSKRVLQ 195
P +QLAQ+TGL+ RV+Q
Sbjct: 204 KPTRHIREQLAQETGLNMRVIQ 225
>sp|O35652|LHX8_MOUSE LIM/homeobox protein Lhx8 OS=Mus musculus GN=Lhx8 PE=2 SV=4
Length = 367
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 9 VMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEILRHRDYCGSAEIEQPM 68
+++ DL +H+ C +C C L + ++D+ I+C+ Y R Y G+
Sbjct: 108 LLKVNDLCWHVRCLSCSVCRTSLGRHTSCYIKDKDIFCKLDY----FRRY-GTRCSRCGR 162
Query: 69 SPRPAPWQPTTVQKGRPRKRKLSVDSPTPPSEDINAN--VMRIPSTTLEMLHSGDLSSSM 126
W V++ + L+ + ++ + L +H + ++
Sbjct: 163 HIHSTDW----VRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFDCMLDNL 218
Query: 127 ESLSYESGAGNSSPGS-----GVHSHQRTKRMRTSFKHHQLRTMKSYFNINQNPDAKDLK 181
+ E+G G S G+ V+ + KR RTSF QL+ M++ F + NPDA+ L+
Sbjct: 219 KR-EVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQ 277
Query: 182 QLAQKTGLSKRVLQ 195
+LA++TGLS+RV+Q
Sbjct: 278 KLAERTGLSRRVIQ 291
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 3 ISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFGMRDEMIYCRPHYEIL 53
I S++ V RA+ V+HL CF C SC L+ G+ F + +E + CR H++ +
Sbjct: 164 IHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHFDCM 214
>sp|Q9UBR4|LHX3_HUMAN LIM/homeobox protein Lhx3 OS=Homo sapiens GN=LHX3 PE=1 SV=2
Length = 397
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 MGISSSELVMRARDLVFHLHCFTCISCGILLTKGDLFG-MRDEMIYCRPHYEILRHRD 57
+GI +++V RA+D V+HLHCF C+ C L GD F M D + C+ YE + R+
Sbjct: 95 LGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQRE 152
Score = 37.4 bits (85), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 150 TKRMRTSFKHHQLRTMKSYFNINQNPDAKDLKQLAQKTGLSKRVLQ 195
KR RT+ QL T+KS +N + P +QL+ +TGL RV+Q
Sbjct: 157 AKRPRTTITAKQLETLKSAYNTSPKPARHVREQLSSETGLDMRVVQ 202
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,946,684
Number of Sequences: 539616
Number of extensions: 3075858
Number of successful extensions: 10553
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 133
Number of HSP's that attempted gapping in prelim test: 10063
Number of HSP's gapped (non-prelim): 582
length of query: 196
length of database: 191,569,459
effective HSP length: 111
effective length of query: 85
effective length of database: 131,672,083
effective search space: 11192127055
effective search space used: 11192127055
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)