Your job contains 1 sequence.
>psy17506
MFGSSFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPATSLFGGTQQQTTT
FGSGLFGSQPQATTSATSGLFGNQQQPATNTTGGLFGASNTTFGQSKPAFGGFGGTTSGG
GLFGQSTMFGQTNQAQPGTSSLFGGTTSAFGGAAATGTTIKFSPVTGTDTMMRGGSSQTI
NTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQGTQATGSFFGTTPQPSMFGTNTSTA
QPATSLFGIVTK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17506
(252 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BYU8 - symbol:NUP98 "Uncharacterized protein"... 360 2.0e-31 1
ZFIN|ZDB-GENE-040426-1180 - symbol:nup98 "nucleoporin 98"... 350 2.4e-30 1
UNIPROTKB|E1BCV4 - symbol:NUP98 "Uncharacterized protein"... 323 7.7e-30 2
UNIPROTKB|E2R4V6 - symbol:NUP98 "Uncharacterized protein"... 325 1.2e-29 2
UNIPROTKB|J3KP29 - symbol:NUP98 "Nuclear pore complex pro... 322 1.5e-29 2
UNIPROTKB|P52948 - symbol:NUP98 "Nuclear pore complex pro... 322 2.0e-29 2
RGD|71033 - symbol:Nup98 "nucleoporin 98" species:10116 "... 326 8.7e-28 1
WB|WBGene00003796 - symbol:npp-10 species:6239 "Caenorhab... 294 2.0e-24 1
UNIPROTKB|G5EEH9 - symbol:npp-10 "Nuclear pore complex pr... 294 2.0e-24 1
FB|FBgn0039120 - symbol:Nup98-96 "Nucleoporin 98-96kD" sp... 287 1.3e-23 1
UNIPROTKB|F1SUZ2 - symbol:NUP98 "Uncharacterized protein"... 243 5.4e-19 1
TAIR|locus:2202887 - symbol:AT1G59660 "AT1G59660" species... 180 1.7e-14 2
TAIR|locus:2012788 - symbol:AT1G10390 "AT1G10390" species... 177 3.1e-12 1
CGD|CAL0005513 - symbol:orf19.7433 species:5476 "Candida ... 144 2.1e-10 2
DICTYBASE|DDB_G0274587 - symbol:nup62 "nuclear pore prote... 123 8.9e-08 2
DICTYBASE|DDB_G0274915 - symbol:DDB_G0274915 "unknown" sp... 126 2.1e-07 3
SGD|S000004650 - symbol:NUP116 "FG-nucleoporin component ... 119 3.9e-07 2
DICTYBASE|DDB_G0291390 - symbol:nup98 "putative nucleopor... 101 7.8e-07 2
POMBASE|SPAC1486.05 - symbol:nup189 "nucleoporin Nup98 an... 127 3.5e-06 2
UNIPROTKB|G4MSW8 - symbol:MGG_04617 "Uncharacterized prot... 118 7.5e-06 2
WB|WBGene00003797 - symbol:npp-11 species:6239 "Caenorhab... 111 1.5e-05 2
ASPGD|ASPL0000029682 - symbol:sonB species:162425 "Emeric... 94 2.1e-05 2
SGD|S000001551 - symbol:NUP100 "FG-nucleoporin component ... 111 9.5e-05 2
CGD|CAL0003324 - symbol:orf19.5930 species:5476 "Candida ... 114 0.00014 1
WB|WBGene00003787 - symbol:npp-1 species:6239 "Caenorhabd... 106 0.00021 2
UNIPROTKB|G4MTW8 - symbol:MGG_01590 "Uncharacterized prot... 93 0.00029 2
UNIPROTKB|F1S0W9 - symbol:NUP214 "Uncharacterized protein... 117 0.00053 1
SGD|S000003351 - symbol:NUP57 "FG-nucleoporin component o... 110 0.00076 1
ASPGD|ASPL0000030982 - symbol:nup2 species:162425 "Emeric... 114 0.00089 2
>UNIPROTKB|E1BYU8 [details] [associations]
symbol:NUP98 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 GO:GO:0000776 GO:GO:0006260
GO:GO:0006810 GO:GO:0005643 SUPFAM:SSF82215
GeneTree:ENSGT00550000074799 InterPro:IPR021967 Pfam:PF12110
OMA:VNRDSED EMBL:AADN02055214 EMBL:AADN02055215 EMBL:AADN02055216
EMBL:AADN02055217 EMBL:AADN02055218 EMBL:AADN02055219
EMBL:AADN02055220 EMBL:AADN02055221 EMBL:AADN02055222
IPI:IPI00586977 Ensembl:ENSGALT00000022062 Uniprot:E1BYU8
Length = 1731
Score = 360 (131.8 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 101/260 (38%), Positives = 126/260 (48%)
Query: 2 FGSSFGQAS---TSSAFGQSS-FGKP---AFSSPGFGATNNS--LFGQTATQAPAXXXXX 52
FG+ FG + T+S FGQ++ FG AF + FGA NN+ LFG T QA
Sbjct: 6 FGTPFGGNTGFGTTSTFGQNAGFGTTGGGAFGTSAFGANNNTGGLFGNT--QAKPGGLFS 63
Query: 53 XXXXXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTTFGQSKPAXXX 112
+T +S LFG T+T GGLF + + F QSKPA
Sbjct: 64 SNAFNQPATSSTSTGFGFGTSTGTSSSLFGT-----TSTGGGLFSSQSNAFAQSKPAGFG 118
Query: 113 XXXXXXXXXXXXXXXMFGQTNQ-AQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTM 171
+FG TN + P IKF+P TGTD+M
Sbjct: 119 NFGTSTSSGG-----LFGTTNTTSNPFGNPSGSLFGPTSFTATPTGTTIKFNPPTGTDSM 173
Query: 172 MRGGSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQGTQATGSFFGTTPQPS 231
++ G S TINT+H CIT MKEYE+KSLEELR EDY ANRKGP A G+ TT
Sbjct: 174 VKSGVSTTINTKHQCITAMKEYESKSLEELRLEDYMANRKGPSNPVGA-GA---TT---G 226
Query: 232 MFGTNTSTAQPATSLFGIVT 251
+FGT+T+T+ AT LFG T
Sbjct: 227 LFGTSTATSSTATGLFGSST 246
>ZFIN|ZDB-GENE-040426-1180 [details] [associations]
symbol:nup98 "nucleoporin 98" species:7955 "Danio
rerio" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
ZFIN:ZDB-GENE-040426-1180 GO:GO:0006810 GO:GO:0005643
SUPFAM:SSF82215 GeneTree:ENSGT00550000074799 InterPro:IPR021967
Pfam:PF12110 EMBL:CR847523 IPI:IPI00997719
Ensembl:ENSDART00000130950 Bgee:E7F981 Uniprot:E7F981
Length = 1807
Score = 350 (128.3 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 100/260 (38%), Positives = 118/260 (45%)
Query: 2 FGSSFGQASTSSAFGQ--SSFGK-PA-FSSPGFGATNNS--LFGQTATQAPAXXXXXXXX 55
FG G TSS FGQ S FG P F S FG TNN+ LFG T + P
Sbjct: 10 FGGGTGGFGTSSTFGQPNSGFGATPGGFGSSAFGTTNNTGGLFGNTQNK-PGGLFGSSTF 68
Query: 56 XXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGG-LFGASNTTFGQSKPAXXXXX 114
AT+ ++ LFG+ TNT GG LF N FG +KPA
Sbjct: 69 SQPVTSSTSSGFGFG-ATSGTSNSLFGS-----TNTGGGGLFSQQNNAFGANKPAAFGNF 122
Query: 115 XXXXXXXXXXXXXMFGQTNQAQ-PXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMR 173
+FG TN A P IKF+P TG+DTM++
Sbjct: 123 GTSTSSGG-----LFGTTNTASNPFGGTSGSLFGSSSFTAAPPGTTIKFNPPTGSDTMVK 177
Query: 174 GGSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQGTQA--TGSFFGTT-PQP 230
GG + +INT+H CIT MKEYENKSLEELR EDY+A RKGP A TG FG P
Sbjct: 178 GGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNLPMAAGTGGLFGAAAPAT 237
Query: 231 SMFGTNT-STAQPATSL-FG 248
GT ++ P T FG
Sbjct: 238 PSTGTGLFGSSAPNTGFNFG 257
>UNIPROTKB|E1BCV4 [details] [associations]
symbol:NUP98 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006260 "DNA replication" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 GO:GO:0000776 GO:GO:0006260
GO:GO:0006810 GO:GO:0005643 SUPFAM:SSF82215
GeneTree:ENSGT00550000074799 InterPro:IPR021967 Pfam:PF12110
OMA:VNRDSED EMBL:DAAA02040991 IPI:IPI00701747
Ensembl:ENSBTAT00000011092 Uniprot:E1BCV4
Length = 1816
Score = 323 (118.8 bits), Expect = 7.7e-30, Sum P(2) = 7.7e-30
Identities = 87/252 (34%), Positives = 119/252 (47%)
Query: 2 FGSSFGQASTSSAFGQSS-FGKP---AFSSPGFGATNNS--LFGQTATQAPAXXXXXXXX 55
FG G T+S FGQ++ FG AF + FG++NN+ LFG + T+ P
Sbjct: 10 FGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTK-PGGLFGTNSF 68
Query: 56 XXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTTFGQSKPAXXXXXX 115
+T ++ LFG +T T+ LF + N F Q+KP
Sbjct: 69 SQPATSTSTGFGFG--TSTGTSNSLFGTA---STGTS--LFSSQNNAFAQNKPTGFGNFG 121
Query: 116 XXXXXXXXXXXXMFGQTNQ-AQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMRG 174
+FG TN + P IKF+P TGTDTM++
Sbjct: 122 TSTSSGG-----LFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKA 176
Query: 175 GSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQ--GTQATGSFFGTTPQPS- 231
G S I+T+H CIT MKEYE+KSLEELR EDY+ANRKGPQ G T FG++P S
Sbjct: 177 GVSTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSS 236
Query: 232 ---MFGTNTSTA 240
+F ++T+ +
Sbjct: 237 ATGLFSSSTTNS 248
Score = 53 (23.7 bits), Expect = 7.7e-30, Sum P(2) = 7.7e-30
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 217 TQATGSFFGTTP---QPS-----MFGTNTSTAQPATSLFGIVT 251
TQ TG FG T QPS +FG T +QP LFG T
Sbjct: 294 TQTTGFSFGNTSTLGQPSTNTMGLFGV-TQASQPG-GLFGTAT 334
Score = 49 (22.3 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 216 GTQATG-SFFGTTPQPSMFGTNTS----TAQPA--TSLFG 248
GT +G S FG+ P P GT TA A SLFG
Sbjct: 410 GTNTSGNSIFGSKPGPGTLGTGLGAGFGTALGAGQASLFG 449
Score = 38 (18.4 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 216 GTQATGS-FFGTTPQPSMFGTNTSTAQP--ATS--LFG 248
G A GS FG + + FGT+T++A TS LFG
Sbjct: 355 GFGAVGSTLFGNN-KLTTFGTSTTSAPSFGTTSGGLFG 391
>UNIPROTKB|E2R4V6 [details] [associations]
symbol:NUP98 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] InterPro:IPR007230 Pfam:PF04096
PROSITE:PS51434 GO:GO:0006810 GO:GO:0005643 SUPFAM:SSF82215
KO:K14297 GeneTree:ENSGT00550000074799 InterPro:IPR021967
Pfam:PF12110 CTD:4928 OMA:VNRDSED EMBL:AAEX03012830
EMBL:AAEX03012829 RefSeq:XP_861730.1 Ensembl:ENSCAFT00000009477
GeneID:476822 KEGG:cfa:476822 Uniprot:E2R4V6
Length = 1800
Score = 325 (119.5 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 87/252 (34%), Positives = 119/252 (47%)
Query: 2 FGSSFGQASTSSAFGQSS-FGKP---AFSSPGFGATNNS--LFGQTATQAPAXXXXXXXX 55
FG G T+S FGQ++ FG AF + FG++NN+ LFG + T+ P
Sbjct: 10 FGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTK-PGGLFGTNSF 68
Query: 56 XXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTTFGQSKPAXXXXXX 115
+T ++ LFG +T T+ LF + N F Q+KP
Sbjct: 69 SQPATSTSTGFGFG--TSTGTSNSLFGTA---STGTS--LFSSQNNAFAQNKPTGFGNFG 121
Query: 116 XXXXXXXXXXXXMFGQTNQ-AQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMRG 174
+FG TN + P IKF+P TGTDTM++
Sbjct: 122 TSTSSGG-----LFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKA 176
Query: 175 GSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQ--GTQATGSFFGTTPQPS- 231
G S I+T+H CIT MKEYE+KSLEELR EDY+ANRKGPQ G T FG++P S
Sbjct: 177 GVSTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSS 236
Query: 232 ---MFGTNTSTA 240
+F ++T+ +
Sbjct: 237 ATGLFSSSTTNS 248
Score = 49 (22.3 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 216 GTQATGS-FFGTTPQPSMFGTNTS----TAQPA--TSLFG 248
GT +GS FG+ P P GT TA A SLFG
Sbjct: 394 GTNTSGSSIFGSKPGPGTLGTGLGAGFGTALGAGQASLFG 433
>UNIPROTKB|J3KP29 [details] [associations]
symbol:NUP98 "Nuclear pore complex protein Nup98-Nup96"
species:9606 "Homo sapiens" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434 GO:GO:0006810
GO:GO:0005643 EMBL:AC060812 SUPFAM:SSF82215 InterPro:IPR021967
Pfam:PF12110 EMBL:AC090587 HGNC:HGNC:8068 ChiTaRS:NUP98
ProteinModelPortal:J3KP29 Ensembl:ENST00000359171 Uniprot:J3KP29
Length = 1638
Score = 322 (118.4 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 88/252 (34%), Positives = 118/252 (46%)
Query: 2 FGSSFGQASTSSAFGQSS-FGKP---AFSSPGFGATNNS--LFGQTATQAPAXXXXXXXX 55
FG G T+S FGQ++ FG AF + FG++NN+ LFG + T+ P
Sbjct: 10 FGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTK-PGGLFGTSSF 68
Query: 56 XXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTTFGQSKPAXXXXXX 115
T+ T LFG +T T+ LF + N F Q+KP
Sbjct: 69 SQPATSTSTGFGFGTSTGTANT--LFGTA---STGTS--LFSSQNNAFAQNKPTGFGNFG 121
Query: 116 XXXXXXXXXXXXMFGQTNQ-AQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMRG 174
+FG TN + P IKF+P TGTDTM++
Sbjct: 122 TSTSSGG-----LFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKA 176
Query: 175 GSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQ--GTQATGSFFGTTPQPS- 231
G S I+T+H CIT MKEYE+KSLEELR EDY+ANRKGPQ G T FG++P S
Sbjct: 177 GVSTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSS 236
Query: 232 ---MFGTNTSTA 240
+F ++T+ +
Sbjct: 237 ATGLFSSSTTNS 248
Score = 50 (22.7 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 216 GTQATG-SFFGTTPQPSMFGTNTS----TAQPA--TSLFG 248
GT +G S FG+ P P GT TA A SLFG
Sbjct: 394 GTNTSGNSIFGSKPAPGTLGTGLGAGFGTALGAGQASLFG 433
>UNIPROTKB|P52948 [details] [associations]
symbol:NUP98 "Nuclear pore complex protein Nup98-Nup96"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0042277 "peptide
binding" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IDA;NAS]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0031080 "nuclear
pore outer ring" evidence=NAS;IDA] [GO:0006999 "nuclear pore
organization" evidence=NAS] [GO:0000059 "protein import into
nucleus, docking" evidence=NAS] [GO:0006913 "nucleocytoplasmic
transport" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017056 "structural constituent of nuclear pore"
evidence=IMP;NAS] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IDA;TAS] [GO:0000776
"kinetochore" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0042405 "nuclear inclusion body" evidence=IDA]
[GO:0044615 "nuclear pore nuclear basket" evidence=IDA] [GO:0051292
"nuclear pore complex assembly" evidence=IMP] [GO:0005215
"transporter activity" evidence=TAS] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0008645 "hexose
transport" evidence=TAS] [GO:0010827 "regulation of glucose
transport" evidence=TAS] [GO:0015758 "glucose transport"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0019221 "cytokine-mediated signaling pathway" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0044281
GO:GO:0005975 GO:GO:0006260 GO:GO:0031965 GO:GO:0019221
GO:GO:0015758 GO:GO:0010827 GO:GO:0055085 GO:GO:0005215
GO:GO:0042277 eggNOG:NOG12793 GO:GO:0051028 GO:GO:0000236
GO:GO:0031080 GO:GO:0006999 GO:GO:0000059 GO:GO:0017056
EMBL:AC060812 SUPFAM:SSF82215 KO:K14297 InterPro:IPR021967
Pfam:PF12110 EMBL:U41815 EMBL:AB040538 EMBL:AF071076 EMBL:AF071077
EMBL:AF231130 EMBL:AC090587 EMBL:BC041136 EMBL:BC012906
EMBL:AF116074 EMBL:BT007349 EMBL:AL133601 EMBL:AL137613
IPI:IPI00006038 IPI:IPI00216688 IPI:IPI00337395 IPI:IPI00337397
IPI:IPI00936708 IPI:IPI00953181 PIR:T43443 RefSeq:NP_005378.4
RefSeq:NP_057404.2 RefSeq:NP_624357.1 RefSeq:NP_624358.2
UniGene:Hs.524750 PDB:1KO6 PDB:2Q5X PDB:2Q5Y PDB:3MMY PDBsum:1KO6
PDBsum:2Q5X PDBsum:2Q5Y PDBsum:3MMY ProteinModelPortal:P52948
SMR:P52948 DIP:DIP-32484N IntAct:P52948 MINT:MINT-121544
STRING:P52948 MEROPS:S59.001 PhosphoSite:P52948 DMDM:308153660
PaxDb:P52948 PRIDE:P52948 DNASU:4928 Ensembl:ENST00000324932
Ensembl:ENST00000355260 Ensembl:ENST00000397004
Ensembl:ENST00000397007 GeneID:4928 KEGG:hsa:4928 UCSC:uc001lyh.3
UCSC:uc001lyi.3 UCSC:uc001lyj.2 UCSC:uc001lyk.2 CTD:4928
GeneCards:GC11M003696 HGNC:HGNC:8068 MIM:601021 neXtProt:NX_P52948
PharmGKB:PA31856 HOVERGEN:HBG052702 OMA:VNRDSED ChiTaRS:NUP98
EvolutionaryTrace:P52948 GenomeRNAi:4928 NextBio:18979
PMAP-CutDB:P52948 ArrayExpress:P52948 Bgee:P52948
Genevestigator:P52948 GermOnline:ENSG00000110713 Uniprot:P52948
Length = 1817
Score = 322 (118.4 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 88/252 (34%), Positives = 118/252 (46%)
Query: 2 FGSSFGQASTSSAFGQSS-FGKP---AFSSPGFGATNNS--LFGQTATQAPAXXXXXXXX 55
FG G T+S FGQ++ FG AF + FG++NN+ LFG + T+ P
Sbjct: 10 FGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTK-PGGLFGTSSF 68
Query: 56 XXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTTFGQSKPAXXXXXX 115
T+ T LFG +T T+ LF + N F Q+KP
Sbjct: 69 SQPATSTSTGFGFGTSTGTANT--LFGTA---STGTS--LFSSQNNAFAQNKPTGFGNFG 121
Query: 116 XXXXXXXXXXXXMFGQTNQ-AQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMRG 174
+FG TN + P IKF+P TGTDTM++
Sbjct: 122 TSTSSGG-----LFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKA 176
Query: 175 GSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQ--GTQATGSFFGTTPQPS- 231
G S I+T+H CIT MKEYE+KSLEELR EDY+ANRKGPQ G T FG++P S
Sbjct: 177 GVSTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSS 236
Query: 232 ---MFGTNTSTA 240
+F ++T+ +
Sbjct: 237 ATGLFSSSTTNS 248
Score = 50 (22.7 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 216 GTQATG-SFFGTTPQPSMFGTNTS----TAQPA--TSLFG 248
GT +G S FG+ P P GT TA A SLFG
Sbjct: 411 GTNTSGNSIFGSKPAPGTLGTGLGAGFGTALGAGQASLFG 450
>RGD|71033 [details] [associations]
symbol:Nup98 "nucleoporin 98" species:10116 "Rattus norvegicus"
[GO:0000059 "protein import into nucleus, docking" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005635 "nuclear envelope" evidence=ISO] [GO:0005643 "nuclear
pore" evidence=IEA;ISO;ISS;IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA;ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=ISO;ISS] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0031965 "nuclear membrane"
evidence=ISO;ISS;IDA] [GO:0034399 "nuclear periphery"
evidence=ISO;ISS;IDA] [GO:0042277 "peptide binding" evidence=IDA]
[GO:0042405 "nuclear inclusion body" evidence=ISO;IDA] [GO:0044615
"nuclear pore nuclear basket" evidence=ISO;IDA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051292 "nuclear pore complex assembly"
evidence=ISO;ISS] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
RGD:71033 GO:GO:0005654 EMBL:CH473956 GO:GO:0042277 eggNOG:NOG12793
GO:GO:0051028 GO:GO:0031080 GO:GO:0000059 SUPFAM:SSF82215 KO:K14297
GeneTree:ENSGT00550000074799 InterPro:IPR021967 Pfam:PF12110
MEROPS:S59.001 CTD:4928 HOVERGEN:HBG052702 EMBL:L39991
IPI:IPI00197380 IPI:IPI00389189 PIR:A56517 RefSeq:NP_112336.2
UniGene:Rn.11324 ProteinModelPortal:P49793 STRING:P49793
PhosphoSite:P49793 PRIDE:P49793 Ensembl:ENSRNOT00000027575
GeneID:81738 KEGG:rno:81738 UCSC:RGD:71033 HOGENOM:HOG000044579
OrthoDB:EOG437RD1 ArrayExpress:P49793 Genevestigator:P49793
GermOnline:ENSRNOG00000020347 Uniprot:P49793
Length = 1816
Score = 326 (119.8 bits), Expect = 8.7e-28, P = 8.7e-28
Identities = 87/252 (34%), Positives = 117/252 (46%)
Query: 2 FGSSFGQASTSSAFGQSS-FGKP---AFSSPGFGATNNS--LFGQTATQAPAXXXXXXXX 55
FG G T+S FGQ++ FG AF + FG++NN+ LFG + T+ P
Sbjct: 10 FGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTK-PGGLFGTSSF 68
Query: 56 XXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTTFGQSKPAXXXXXX 115
+T ++ LFG NT LF + N F Q+KP
Sbjct: 69 SQPATSTSTGFGFG--TSTGTSNSLFGT-----ANTGTSLFSSQNNAFAQNKPTGFGNFG 121
Query: 116 XXXXXXXXXXXXMFGQTNQ-AQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMRG 174
+FG TN + P IKF+P TGTDTM++
Sbjct: 122 TSTSSGG-----LFGTTNTTSNPFGNTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKA 176
Query: 175 GSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQ--GTQATGSFFGTTPQPS- 231
G S I+T+H CIT MKEYE+KSLEELR EDY+ANRKGPQ G T FG++P S
Sbjct: 177 GVSTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSS 236
Query: 232 ---MFGTNTSTA 240
+F ++T+ +
Sbjct: 237 ATGLFSSSTTNS 248
>WB|WBGene00003796 [details] [associations]
symbol:npp-10 species:6239 "Caenorhabditis elegans"
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006997 "nucleus organization"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] InterPro:IPR007230 Pfam:PF04096
PROSITE:PS51434 GO:GO:0009792 GO:GO:0040007 GO:GO:0008406
GO:GO:0002119 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0040039 GO:GO:0030719 GO:GO:0051028
GO:GO:0006997 GO:GO:0043186 InterPro:IPR025574 Pfam:PF13634
SUPFAM:SSF82215 GeneTree:ENSGT00550000074799 InterPro:IPR021967
Pfam:PF12110 EMBL:GU174496 EMBL:FO081350 RefSeq:NP_001254934.1
RefSeq:NP_498309.3 RefSeq:NP_498310.3 UniGene:Cel.17025
ProteinModelPortal:G5EEH9 SMR:G5EEH9 IntAct:G5EEH9 PRIDE:G5EEH9
EnsemblMetazoa:ZK328.5b GeneID:175852 KEGG:cel:CELE_ZK328.5
CTD:175852 WormBase:ZK328.5a WormBase:ZK328.5b WormBase:ZK328.5c
OMA:PTINEMK Uniprot:G5EEH9
Length = 1678
Score = 294 (108.6 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 90/260 (34%), Positives = 111/260 (42%)
Query: 1 MFGS--SFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXX 58
MFG SFG SS+FG S G F N LFGQ A +
Sbjct: 1 MFGQNKSFG----SSSFGGGSSGSGLFGQNNQNNQNKGLFGQPANNSGTTGLFGAAQNKP 56
Query: 59 XXXXXXXXXXXPQATTSATSGLFGNQQQPATNTT----GGLFGASNTTFGQ-SKPAXXXX 113
S TS +FG+ QQP N + GG A+ + FG S A
Sbjct: 57 AGSIF--------GAASNTSSIFGSPQQPQNNQSSLFGGGQNNANRSIFGSTSSAAPASS 108
Query: 114 XXXXXXXXXXXXXXMFGQTNQAQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMR 173
+FG N A P +KF P +DTMMR
Sbjct: 109 SLFGNNANNTGTSSIFGSNNNA-PSGGGLFGASTVSGTT-------VKFEPPISSDTMMR 160
Query: 174 GGSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQGTQATGS-FFG---TTPQ 229
G++QTI+T+H+CI+ M +Y+ KS+EELR EDY ANRK P GT +TG FG TT Q
Sbjct: 161 NGTTQTISTKHMCISAMSKYDGKSIEELRVEDYIANRKAPGTGTTSTGGGLFGASNTTNQ 220
Query: 230 PSMFGT-NTSTAQPATSLFG 248
G +S AQ TSLFG
Sbjct: 221 AGSSGLFGSSNAQQKTSLFG 240
Score = 115 (45.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 34/99 (34%), Positives = 40/99 (40%)
Query: 1 MFGSSFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXX 60
+FGSS Q TS FG +S P + T +SLFG A
Sbjct: 226 LFGSSNAQQKTS-LFGGASTSSPFGGNTSTANTGSSLFGNNNANTSAASGSLFGAKPAGS 284
Query: 61 XXXXXXXXXPQATTSATSG--LFGNQQQPATNTTGGLFG 97
+T T+G LFGNQQ P TNT G LFG
Sbjct: 285 SLFGSTATTGASTFGQTTGSSLFGNQQ-PQTNTGGSLFG 322
Score = 69 (29.3 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 212 GPQQGTQATGSFFGTTPQPS---MFGTNTSTAQPATSLFG 248
G T G FG+ PQ S +FG+NT QP + FG
Sbjct: 442 GNTTNTGTGGGLFGSQPQASSGGLFGSNTQATQPLNTGFG 481
Score = 58 (25.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 212 GPQQGTQATGSFFGTTPQPSMFGTNTSTAQPATSLFG 248
G T A G S+FG NTSTA +SLFG
Sbjct: 363 GAPAATNAFGQPAAANTGGSLFG-NTSTANTGSSLFG 398
Score = 41 (19.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 217 TQATGS-FFGTTPQPSMFGTNTSTAQPATSLFG 248
T TGS FG P S T +T T+ FG
Sbjct: 389 TANTGSSLFGAKPATSTGFTFGATQPTTTNAFG 421
>UNIPROTKB|G5EEH9 [details] [associations]
symbol:npp-10 "Nuclear pore complex protein Nup98-Nup96"
species:6239 "Caenorhabditis elegans" [GO:0015031 "protein
transport" evidence=NAS] [GO:0051028 "mRNA transport" evidence=NAS]
[GO:0005643 "nuclear pore" evidence=NAS] [GO:0030719 "P granule
organization" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 GO:GO:0009792 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 GO:GO:0040039 GO:GO:0030719
GO:GO:0051028 GO:GO:0006997 GO:GO:0043186 InterPro:IPR025574
Pfam:PF13634 SUPFAM:SSF82215 GeneTree:ENSGT00550000074799
InterPro:IPR021967 Pfam:PF12110 EMBL:GU174496 EMBL:FO081350
RefSeq:NP_001254934.1 RefSeq:NP_498309.3 RefSeq:NP_498310.3
UniGene:Cel.17025 ProteinModelPortal:G5EEH9 SMR:G5EEH9
IntAct:G5EEH9 PRIDE:G5EEH9 EnsemblMetazoa:ZK328.5b GeneID:175852
KEGG:cel:CELE_ZK328.5 CTD:175852 WormBase:ZK328.5a
WormBase:ZK328.5b WormBase:ZK328.5c OMA:PTINEMK Uniprot:G5EEH9
Length = 1678
Score = 294 (108.6 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 90/260 (34%), Positives = 111/260 (42%)
Query: 1 MFGS--SFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXX 58
MFG SFG SS+FG S G F N LFGQ A +
Sbjct: 1 MFGQNKSFG----SSSFGGGSSGSGLFGQNNQNNQNKGLFGQPANNSGTTGLFGAAQNKP 56
Query: 59 XXXXXXXXXXXPQATTSATSGLFGNQQQPATNTT----GGLFGASNTTFGQ-SKPAXXXX 113
S TS +FG+ QQP N + GG A+ + FG S A
Sbjct: 57 AGSIF--------GAASNTSSIFGSPQQPQNNQSSLFGGGQNNANRSIFGSTSSAAPASS 108
Query: 114 XXXXXXXXXXXXXXMFGQTNQAQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMR 173
+FG N A P +KF P +DTMMR
Sbjct: 109 SLFGNNANNTGTSSIFGSNNNA-PSGGGLFGASTVSGTT-------VKFEPPISSDTMMR 160
Query: 174 GGSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQGTQATGS-FFG---TTPQ 229
G++QTI+T+H+CI+ M +Y+ KS+EELR EDY ANRK P GT +TG FG TT Q
Sbjct: 161 NGTTQTISTKHMCISAMSKYDGKSIEELRVEDYIANRKAPGTGTTSTGGGLFGASNTTNQ 220
Query: 230 PSMFGT-NTSTAQPATSLFG 248
G +S AQ TSLFG
Sbjct: 221 AGSSGLFGSSNAQQKTSLFG 240
Score = 115 (45.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 34/99 (34%), Positives = 40/99 (40%)
Query: 1 MFGSSFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXX 60
+FGSS Q TS FG +S P + T +SLFG A
Sbjct: 226 LFGSSNAQQKTS-LFGGASTSSPFGGNTSTANTGSSLFGNNNANTSAASGSLFGAKPAGS 284
Query: 61 XXXXXXXXXPQATTSATSG--LFGNQQQPATNTTGGLFG 97
+T T+G LFGNQQ P TNT G LFG
Sbjct: 285 SLFGSTATTGASTFGQTTGSSLFGNQQ-PQTNTGGSLFG 322
Score = 69 (29.3 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 212 GPQQGTQATGSFFGTTPQPS---MFGTNTSTAQPATSLFG 248
G T G FG+ PQ S +FG+NT QP + FG
Sbjct: 442 GNTTNTGTGGGLFGSQPQASSGGLFGSNTQATQPLNTGFG 481
Score = 58 (25.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 212 GPQQGTQATGSFFGTTPQPSMFGTNTSTAQPATSLFG 248
G T A G S+FG NTSTA +SLFG
Sbjct: 363 GAPAATNAFGQPAAANTGGSLFG-NTSTANTGSSLFG 398
Score = 41 (19.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 217 TQATGS-FFGTTPQPSMFGTNTSTAQPATSLFG 248
T TGS FG P S T +T T+ FG
Sbjct: 389 TANTGSSLFGAKPATSTGFTFGATQPTTTNAFG 421
>FB|FBgn0039120 [details] [associations]
symbol:Nup98-96 "Nucleoporin 98-96kD" species:7227
"Drosophila melanogaster" [GO:0005643 "nuclear pore"
evidence=ISS;IPI] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0005487 "nucleocytoplasmic transporter activity"
evidence=ISS] [GO:0044613 "nuclear pore central transport channel"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007184 "SMAD protein import into nucleus" evidence=IMP]
[GO:0030718 "germ-line stem cell maintenance" evidence=IMP]
InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434 EMBL:AE014297
GO:GO:0006911 GO:GO:0005643 GO:GO:0030718 GO:GO:0007184
SUPFAM:SSF82215 KO:K14297 GeneTree:ENSGT00550000074799
InterPro:IPR021967 Pfam:PF12110 OMA:PTINEMK CTD:4928 MEROPS:S59.A04
FlyBase:FBgn0039120 RefSeq:NP_651187.2 UniGene:Dm.14811
ProteinModelPortal:Q9VCH5 SMR:Q9VCH5 IntAct:Q9VCH5 MINT:MINT-280386
STRING:Q9VCH5 EnsemblMetazoa:FBtr0084460 GeneID:42816
KEGG:dme:Dmel_CG10198 UCSC:CG10198-RA InParanoid:Q9VCH5
PhylomeDB:Q9VCH5 GenomeRNAi:42816 NextBio:830718
ArrayExpress:Q9VCH5 Bgee:Q9VCH5 Uniprot:Q9VCH5
Length = 1960
Score = 287 (106.1 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 94/267 (35%), Positives = 115/267 (43%)
Query: 5 SFGQASTSSA--FGQSSFGK---PAFSSPG-FGATNNSLFGQTATQAPAXXXXXXXXXXX 58
+FG ST +A QS FG PA + G FGA ++ FG TAT P
Sbjct: 42 AFGNTSTFAAQPAQQSLFGAAATPAQPAGGLFGANTSTGFGSTATAQPTAFGAFSQPQQT 101
Query: 59 XXXXXXXXXXXPQATTSATSGLFGNQQQPA------TNTTGGLFGASNTT---FGQSKPA 109
T+A++ LFG PA T T G A+ T FGQ A
Sbjct: 102 SNIFGSTQ-------TAASTSLFGQSTLPAFGAAKPTMTAFGQTAAAQPTGSLFGQPAAA 154
Query: 110 XXXXXXXXXXXXXXXXXXMFGQTNQ---AQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVT 166
+FG AQP K+ P
Sbjct: 155 TSTTGFGGFGTSAPTTTNVFGSGTASAFAQPQATAVGASGVNTGTAVA------KYQPTI 208
Query: 167 GTDTMMRGGSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQGTQATGSF-FG 225
GTDT+M+ G + ++NT+ CIT MKE+E KSLEELR EDY RKGPQ G A G+F FG
Sbjct: 209 GTDTLMKSGQANSVNTKQHCITAMKEFEGKSLEELRLEDYMCGRKGPQAGN-APGAFGFG 267
Query: 226 ---TTP-QPSMFGTNTSTAQPATSLFG 248
T P QP+ G STAQP+T LFG
Sbjct: 268 AQVTQPAQPASGGLFGSTAQPSTGLFG 294
Score = 116 (45.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 38/103 (36%), Positives = 48/103 (46%)
Query: 3 GSSFGQASTSSA---FGQSSFGKPAFSSPGFGATNNS-LFGQTATQAPAXXXXXXXXXXX 58
GS FGQA +SA FGQ++ G F + GAT S LFG T P
Sbjct: 362 GSLFGQAPATSAAPAFGQTNTGFGGFGTTA-GATQQSTLFGATPAADP-NKSAFGLGTAA 419
Query: 59 XXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNT 101
P AT++A GLFGN+ PAT+ FGA++T
Sbjct: 420 SAATTGFGFGAP-ATSTAGGGLFGNK--PATSFAAPTFGATST 459
Score = 112 (44.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 41/119 (34%), Positives = 53/119 (44%)
Query: 2 FGSSFGQASTSSAFGQSSFGKPAFSSPGFGATNN--------SLFGQTATQA-PAXXXXX 52
FG F +T++ FGQS+FGKPA +P FG T+ SLFG AT A PA
Sbjct: 18 FGG-FSGTTTTTPFGQSAFGKPA--APAFGNTSTFAAQPAQQSLFGAAATPAQPAGGLFG 74
Query: 53 XXXXXXXXXXXXXXXXXPQATTSA--TSGLFGNQQQPATNTTGGLFGASNT-TFGQSKP 108
A + TS +FG+ Q A+ + LFG S FG +KP
Sbjct: 75 ANTSTGFGSTATAQPTAFGAFSQPQQTSNIFGSTQTAASTS---LFGQSTLPAFGAAKP 130
Score = 60 (26.2 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 219 ATGSFFGT-TPQPSMFGTNTSTAQPATS-LFGIVTK 252
+TG F T T SMFGT QPAT+ FG T+
Sbjct: 289 STGLFGQTVTENKSMFGTTAFGQQPATNNAFGAATQ 324
Score = 53 (23.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 221 GSFFGTTPQPS--MFGTNTST-----AQPATSLFG 248
GS FG T +P +FG T+T A P LFG
Sbjct: 513 GSLFGNTAKPGGGLFGGGTTTLGGTGAAPTGGLFG 547
Score = 48 (22.0 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 212 GPQQGTQATGSFFGTTP--QP--SMFGTNTSTAQPATSLFG 248
G G + FG TP P S FG T+ A AT+ FG
Sbjct: 388 GTTAGATQQSTLFGATPAADPNKSAFGLGTA-ASAATTGFG 427
Score = 47 (21.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 15/40 (37%), Positives = 16/40 (40%)
Query: 212 GPQQGTQATGSFFGTTPQPSM----FGTNTSTAQPATSLF 247
G + T FG T S FG NTSTA LF
Sbjct: 442 GNKPATSFAAPTFGATSTASTPFSNFGLNTSTAATGGGLF 481
>UNIPROTKB|F1SUZ2 [details] [associations]
symbol:NUP98 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006260 "DNA replication" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 GO:GO:0000776 GO:GO:0006260
GO:GO:0006810 GO:GO:0005643 SUPFAM:SSF82215
GeneTree:ENSGT00550000074799 InterPro:IPR021967 Pfam:PF12110
OMA:VNRDSED EMBL:CU928773 EMBL:FP103078 Ensembl:ENSSSCT00000016145
Uniprot:F1SUZ2
Length = 1702
Score = 243 (90.6 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 56/122 (45%), Positives = 72/122 (59%)
Query: 128 MFGQTNQ-AQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMRGGSSQTINTRHVC 186
+FG TN + P IKF+P TGTDTM++ G S I+T+H C
Sbjct: 11 LFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVSTNISTKHQC 70
Query: 187 ITCMKEYENKSLEELRYEDYKANRKGPQQ----GTQATGSFFGTTPQPS----MFGTNTS 238
IT MKEYE+KSLEELR EDY+ANRKGPQ GT ATG FG++P S +F ++T+
Sbjct: 71 ITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGT-ATG-LFGSSPATSSAAGLFSSSTT 128
Query: 239 TA 240
+
Sbjct: 129 NS 130
>TAIR|locus:2202887 [details] [associations]
symbol:AT1G59660 "AT1G59660" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=IDA] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
EMBL:CP002684 GO:GO:0005635 GO:GO:0006810 GO:GO:0005643
SUPFAM:SSF82215 KO:K14297 IPI:IPI00533444 RefSeq:NP_176175.1
UniGene:At.36814 ProteinModelPortal:F4ID16 SMR:F4ID16
MEROPS:S59.A03 PRIDE:F4ID16 EnsemblPlants:AT1G59660.1 GeneID:842256
KEGG:ath:AT1G59660 OMA:PNGGTKG Uniprot:F4ID16
Length = 997
Score = 180 (68.4 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 69/249 (27%), Positives = 101/249 (40%)
Query: 6 FGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXXXXXXX 65
FG +T+ G S+ G A S+P FG+TN FG ++T
Sbjct: 180 FGATNTTGFGGSSTPGFGASSTPAFGSTNTPAFGASSTPLFGSSSSPAFGASPAPAFGSS 239
Query: 66 XXXXPQATTSATSGLFGNQQQP---ATNTTGGLFGASNT---TFGQSKPAXXXXXXXXXX 119
T S+ G FG+ P A+NT+ FGAS++ FG S PA
Sbjct: 240 GNAFGNNTFSS-GGAFGSSSTPTFGASNTSA--FGASSSPSFNFGSS-PAFGQSTSAFGS 295
Query: 120 XXXXXXXXMFGQTNQ---AQPXXXXXXXXXXXXXXXXXXXXXX-IKFSPVTGTDTMMRGG 175
G T AQ I ++P T T + G
Sbjct: 296 SSFGSTQSSLGSTPSPFGAQGAQASTSTFGGQSTIGGQQGGSRVIPYAPTTDTAS---GT 352
Query: 176 SSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQGTQAT--GSFFGTT-PQPSM 232
S++ R I+ M ++ K++EELR+EDY+ KG Q+ T + G+ FG T QPS+
Sbjct: 353 ESKS--ERLQSISAMPAHKGKNMEELRWEDYQRGDKGGQRSTGQSPEGAGFGVTNSQPSI 410
Query: 233 FGTNTSTAQ 241
F T+ + +Q
Sbjct: 411 FSTSPAFSQ 419
Score = 112 (44.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 45/148 (30%), Positives = 62/148 (41%)
Query: 2 FGSS----FGQASTSSAFGQSSF-GKPAFSSPGFGATNNSLFGQTAT------QAPAXXX 50
FG+S FG AS++ AFG S+ G A ++PGFGATN + FG ++T PA
Sbjct: 148 FGASTTPAFG-ASSTPAFGVSNTSGFGATNTPGFGATNTTGFGGSSTPGFGASSTPAFGS 206
Query: 51 XXXXXXXXXXXXXXXXXXXPQ--ATTSATSGLFGNQQQPATNTTGGLFGASNT-TFGQSK 107
P A+ + G GN T ++GG FG+S+T TFG S
Sbjct: 207 TNTPAFGASSTPLFGSSSSPAFGASPAPAFGSSGNAFGNNTFSSGGAFGSSSTPTFGASN 266
Query: 108 PAXXXXXXXXXXXXXXXXXXMFGQTNQA 135
+ FGQ+ A
Sbjct: 267 TSAFGASSSPSFNFGSSPA--FGQSTSA 292
Score = 44 (20.5 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 221 GSFFGTTPQPSMFGTNTSTAQPATSLF 247
G F + P +FG+N S AQ T F
Sbjct: 504 GGFNNSQSSP-LFGSNPSFAQNTTPAF 529
Score = 41 (19.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 214 QQGTQATGSFFGTTPQPSMFGTNTSTAQPATSLFG 248
Q T F TTP S + S +QP T FG
Sbjct: 419 QTPVNPTNPFSQTTPT-SNTNFSPSFSQPTTPSFG 452
Score = 39 (18.8 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 225 GTTPQPSMFGTNTSTAQPATSLFG 248
G+TP S+ G N S + P LFG
Sbjct: 496 GSTPGFSIGGFNNSQSSP---LFG 516
Score = 39 (18.8 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 220 TGSFFG--TTP----QPSMFGTNTSTAQPATSLF 247
T FG TTP S+FG NT+ A ++ F
Sbjct: 532 TSPLFGQNTTPALGQSSSVFGQNTNPALVQSNTF 565
>TAIR|locus:2012788 [details] [associations]
symbol:AT1G10390 "AT1G10390" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=IDA] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005635 GO:GO:0006810
GO:GO:0005643 eggNOG:NOG12793 SUPFAM:SSF82215 KO:K14297 HSSP:Q9Y6J4
EMBL:AY078948 EMBL:BT003030 EMBL:AK226964 IPI:IPI00523265
RefSeq:NP_001031018.1 RefSeq:NP_172510.2 UniGene:At.27877
ProteinModelPortal:Q8RY25 SMR:Q8RY25 STRING:Q8RY25 MEROPS:S59.A02
PaxDb:Q8RY25 PRIDE:Q8RY25 EnsemblPlants:AT1G10390.1
EnsemblPlants:AT1G10390.2 GeneID:837579 KEGG:ath:AT1G10390
TAIR:At1g10390 HOGENOM:HOG000085153 InParanoid:Q8RY25 OMA:ESISAMP
PhylomeDB:Q8RY25 ProtClustDB:CLSN2713828 Genevestigator:Q8RY25
Uniprot:Q8RY25
Length = 1041
Score = 177 (67.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 69/250 (27%), Positives = 96/250 (38%)
Query: 5 SFGQASTSSAFGQS--SFGKPAFSSPG-FGATNNSLFGQTATQAPAXXXXXXXXXXXXXX 61
+FG AS + AFG + +FG F S G FGA+N FG + T PA
Sbjct: 201 AFG-ASPTPAFGSTGTTFGNTGFGSGGAFGASNTPAFGASGT--PAFGASGTPAFGASST 257
Query: 62 XXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTT---FGQSKPAXXXXXXXXX 118
P S+T FG P+ FGASNT+ FG S PA
Sbjct: 258 PAFGASSTPAFGASSTPA-FGGSSTPS-------FGASNTSSFSFGSS-PAFGQSTSAFG 308
Query: 119 XXXXXXXXXMFGQTNQAQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMRGGSSQ 178
FG + P + ++P DT G +Q
Sbjct: 309 SSAFGSTPSPFGGAQASTPTFGGSGFGQSTFGGQQGGSRA-VPYAPTVEADT---GTGTQ 364
Query: 179 TINTRHVCITCMKEYENKSLEELRYEDYKANRKG-PQQGTQATGSF-FGTTP-QPSMFGT 235
I+ M Y+ K+ EELR+EDY+ KG P Q+ G+ FG +P QP+ F
Sbjct: 365 PAGKLE-SISAMPAYKEKNYEELRWEDYQRGDKGGPLPAGQSPGNAGFGISPSQPNPFSP 423
Query: 236 NTSTAQPATS 245
+ + Q + +
Sbjct: 424 SPAFGQTSAN 433
Score = 106 (42.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 43/117 (36%), Positives = 47/117 (40%)
Query: 5 SFGQASTSSAFGQSS---FGK---PAF---SSPGFGATNNSLFGQTATQAPAXXXXXXXX 55
SFG ST S FG SS FG PAF +SP FGATN FG + T A
Sbjct: 161 SFGATSTPS-FGASSTPAFGATNTPAFGASNSPSFGATNTPAFGASPTPAFGSTGTTFGN 219
Query: 56 XXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGG-LFGASNT-TFGQSK-PA 109
P S T FG PA + FGAS+T FG S PA
Sbjct: 220 TGFGSGGAFGASNTPAFGASGTPA-FGASGTPAFGASSTPAFGASSTPAFGASSTPA 275
Score = 103 (41.3 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 43/123 (34%), Positives = 52/123 (42%)
Query: 2 FGSS--FGQASTSSAFGQSS---FGK---PAF---SSPGFGATNNSLFGQTATQAPAXXX 50
FGSS FG A+ + AFG S FG P+F S+P FGATN FG A+ +P+
Sbjct: 140 FGSSTPFG-ATNTPAFGAPSTPSFGATSTPSFGASSTPAFGATNTPAFG--ASNSPSFGA 196
Query: 51 XXXXXXXXXXXXXXXXXXXPQATTS-ATSGLFGNQQQPATNTTGG-LFGASNT-TFGQSK 107
T + G FG PA +G FGAS T FG S
Sbjct: 197 TNTPAFGASPTPAFGSTGTTFGNTGFGSGGAFGASNTPAFGASGTPAFGASGTPAFGASS 256
Query: 108 -PA 109
PA
Sbjct: 257 TPA 259
Score = 53 (23.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 216 GTQATGSF----FGTTPQPSMFGTNTSTAQPATSLFG 248
GT AT +F FG T ++FG+ +ST TS+FG
Sbjct: 460 GT-ATSNFGSSPFGVTSSSNLFGSGSSTT---TSVFG 492
Score = 48 (22.0 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 208 ANRKGPQQGTQATGSFFGTTPQ--PSMFGTNTSTAQPATSLFGIVT 251
AN P + +T F TP S FGT TS +S FG+ +
Sbjct: 432 ANPTNPFSSSTSTNPFAPQTPTIASSSFGTATSNF--GSSPFGVTS 475
>CGD|CAL0005513 [details] [associations]
symbol:orf19.7433 species:5476 "Candida albicans" [GO:0044613
"nuclear pore central transport channel" evidence=IEA] [GO:0044614
"nuclear pore cytoplasmic filaments" evidence=IEA] [GO:0000055
"ribosomal large subunit export from nucleus" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] [GO:0006409 "tRNA
export from nucleus" evidence=IEA] [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 CGD:CAL0005513 GO:GO:0006810
GO:GO:0005643 EMBL:AACQ01000074 eggNOG:NOG12793
HOGENOM:HOG000093958 InterPro:IPR025574 Pfam:PF13634
SUPFAM:SSF82215 KO:K14297 RefSeq:XP_716094.1
ProteinModelPortal:Q5A2Y2 STRING:Q5A2Y2 GeneID:3642281
KEGG:cal:CaO19.7433 Uniprot:Q5A2Y2
Length = 1096
Score = 144 (55.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 71/266 (26%), Positives = 96/266 (36%)
Query: 4 SSFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXXXXX 63
S FG +T++ G FG A SS GFG++N FG A
Sbjct: 82 SPFGSTNTNTT-GGGIFGSNANSSTGFGSSN--AFG-------ASSNTNTTPAFGGNTGG 131
Query: 64 XXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTTFGQSKPAXXXXXXXXXXXXXX 123
T S+ G QQQ TT FG+SN + G +
Sbjct: 132 GLFGSTANGTGSSPFGQQQQQQQQPQQTTSA-FGSSNNS-GSVFGSSATGGGLFGSKPAT 189
Query: 124 XXXXMFGQT--NQAQPXXXXXXXXXXXXXXXX---XXXXXXIKFSPVTGTDTMMRGGSSQ 178
FG T N + P +F+P T D+ ++
Sbjct: 190 STFGGFGSTTANASSPFGASTTNAFGGGASVDPNVNNGTAAKQFTPFTEKDS-----ANM 244
Query: 179 TINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQG------------TQATGS---F 223
T +++C CM EY+N S EELR +DY+ R+ P G T ATG F
Sbjct: 245 TNVFQNIC--CMPEYKNFSFEELRLKDYEQGRRFPPAGATANAGFGGAAGTNATGGGFGF 302
Query: 224 FGTTPQPSMFGTNTS-TAQPATSLFG 248
G S FG+ T+ A P+ S FG
Sbjct: 303 SGAATGASPFGSGTAGAANPSGSAFG 328
Score = 125 (49.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 38/109 (34%), Positives = 45/109 (41%)
Query: 1 MFGSSFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXX 60
+FGS G A S+ G S+FG ++ GFGA N+ FGQ
Sbjct: 470 LFGSGTGNAFGSNT-GGSTFGS---NNTGFGAGGNA-FGQQGNTGFGANKPVTTGFGSST 524
Query: 61 XXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGAS---NTTFGQS 106
Q AT GLFG QQ N GGLFGA + FGQS
Sbjct: 525 SGGLFGQQSQQQQPGATGGLFGQNQQQQQNAGGGLFGAKPAGGSVFGQS 573
Score = 42 (19.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 224 FGTTPQPSMFGTNTSTAQP-ATS-LFG 248
FG++ +FG + QP AT LFG
Sbjct: 520 FGSSTSGGLFGQQSQQQQPGATGGLFG 546
Score = 42 (19.8 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 212 GPQQGTQATGSFFGTTPQPSMFGTNTSTAQPATS 245
G QQ TQ PQPS G A+P T+
Sbjct: 666 GQQQQTQQQQQ-----PQPSQLGGGLFGAKPGTT 694
Score = 42 (19.8 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 212 GPQQGTQATGSFFG--TTPQPSMFG--TNTSTAQPATS---LFGIVT 251
G QQ + G FG +FG TN + +TS LFG T
Sbjct: 704 GQQQTSNVGGGLFGGGAASTGGLFGAKTNANATSNSTSTGGLFGGAT 750
>DICTYBASE|DDB_G0274587 [details] [associations]
symbol:nup62 "nuclear pore protein" species:44689
"Dictyostelium discoideum" [GO:0017056 "structural constituent of
nuclear pore" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA;ISS] [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0006606 "protein import into nucleus"
evidence=ISS] [GO:0006405 "RNA export from nucleus" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR007758
InterPro:IPR026010 Pfam:PF05064 dictyBase:DDB_G0274587
GO:GO:0005643 GenomeReviews:CM000151_GR EMBL:AAFI02000012
GO:GO:0006606 eggNOG:NOG12793 GO:GO:0006999 GO:GO:0017056
GO:GO:0006405 PANTHER:PTHR12084 KO:K14306 InterPro:IPR025574
Pfam:PF13634 RefSeq:XP_643911.1 PRIDE:Q86IX4
EnsemblProtists:DDB0237712 GeneID:8619338 KEGG:ddi:DDB_G0274587
OMA:QWIDKST ProtClustDB:CLSZ2846885 Uniprot:Q86IX4
Length = 709
Score = 123 (48.4 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 39/134 (29%), Positives = 52/134 (38%)
Query: 3 GSSFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXXXX 62
G FG AST+ A G FG A ++P G LFG ++T APA
Sbjct: 54 GGLFGGASTTPATGGGLFGG-ASTTPATGG--GGLFGGSSTTAPATGGGGLFGGSTTTAP 110
Query: 63 XXXXXXXPQATTSA----TSGLFGNQQQ--PATNTTGGLFGASNTTFGQSKPAXXXXXXX 116
++T+A T GLFG P+ TTGGLFG ++TT +
Sbjct: 111 ATTGGLFGGSSTTAPSTTTGGLFGGSSTTTPSITTTGGLFGGASTTAPSTTTGGLFGATT 170
Query: 117 XXXXXXXXXXXMFG 130
+FG
Sbjct: 171 PATTATTTTGGLFG 184
Score = 116 (45.9 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 41/137 (29%), Positives = 50/137 (36%)
Query: 3 GSSFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXXXX 62
G FG AST+ A G FG A ++P AT LFG +T
Sbjct: 40 GGLFGGASTTPATGGGLFGG-ASTTP---ATGGGLFGGASTTPATGGGGLFGGSSTTAPA 95
Query: 63 XXXXXXXPQATTSA---TSGLFGNQQQPA-TNTTGGLFGASNTTFGQSKPAXXXXXXXXX 118
+TT+A T GLFG A + TTGGLFG S+TT
Sbjct: 96 TGGGGLFGGSTTTAPATTGGLFGGSSTTAPSTTTGGLFGGSSTTTPSITTTGGLFGGAST 155
Query: 119 XXXXXXXXXMFGQTNQA 135
+FG T A
Sbjct: 156 TAPSTTTGGLFGATTPA 172
Score = 115 (45.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 30/103 (29%), Positives = 47/103 (45%)
Query: 1 MFGSSFGQASTSSA--FGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXX 58
+FG++ +T+S FG S+ P+ + FG + + +AT P
Sbjct: 301 LFGATTPATTTTSGGLFGASTT-TPSTTGGLFGVSTTTPSTTSAT-TPTTTTTGGLFGAA 358
Query: 59 XXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNT 101
TT+ T+GLFG+ P+T T+GGLFG+S T
Sbjct: 359 TTSATTPSTTTTTTTTTPTTGLFGSSTTPSTTTSGGLFGSSTT 401
Score = 112 (44.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 47/183 (25%), Positives = 56/183 (30%)
Query: 4 SSFGQA-STSSAFGQSSFGKPAFSSPG-FG------ATNNSLFGQTATQAPAXXXXXXXX 55
S FG S FG S PA G FG AT LFG +T PA
Sbjct: 15 SLFGSTPSAGGLFGGGSSTTPATGGGGLFGGASTTPATGGGLFGGAST-TPATGGGLFGG 73
Query: 56 XXXXXXXXXXXXXXPQATTS-ATSG--LFGNQQQPATNTTGGLFGASNTTFGQSKPAXXX 112
+TT+ AT G LFG A TTGGLFG S+TT +
Sbjct: 74 ASTTPATGGGGLFGGSSTTAPATGGGGLFGGSTTTAPATTGGLFGGSSTTAPSTTTGGLF 133
Query: 113 XXXXXXXXXXXXXXXMFGQTNQAQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMM 172
+FG + P F T T ++
Sbjct: 134 GGSSTTTPSITTTGGLFGGASTTAPSTTTGGLFGATTPATTATTTTGGLFGGSTTTPSLT 193
Query: 173 RGG 175
GG
Sbjct: 194 SGG 196
Score = 111 (44.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 31/107 (28%), Positives = 49/107 (45%)
Query: 1 MFGSSFGQASTSSAFGQSSFGKPA---FSSPGFGATNNS--LFGQTATQAPAXXXXXXXX 55
+FG++ A+T S ++ P F S +T S LFG + T P+
Sbjct: 354 LFGAATTSATTPSTTTTTTTTTPTTGLFGSSTTPSTTTSGGLFGSSTT--PSTTTTTTTA 411
Query: 56 XXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTT 102
P +TT+ + GLFG+ P+T ++GGLFGA+ T+
Sbjct: 412 TTPTTGGLFGSSTTP-STTTTSGGLFGSSATPSTTSSGGLFGATTTS 457
Score = 110 (43.8 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 37/105 (35%), Positives = 46/105 (43%)
Query: 3 GSSFGQASTSSAFGQSSFGKPAFSSPG-FGATNNS----LFGQTATQAPAXXXXXXXXXX 57
G FG A+T +A +S P+ +S G FGAT S LFG + T
Sbjct: 237 GGLFG-ATTPAATTTTSTTTPSLTSGGLFGATTPSTTGGLFGASTTTT-TTPSTTSTTTP 294
Query: 58 XXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTT 102
P ATT+ + GLFG +TTGGLFG S TT
Sbjct: 295 STTTGGLFGATTP-ATTTTSGGLFG-ASTTTPSTTGGLFGVSTTT 337
Score = 109 (43.4 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 40/142 (28%), Positives = 49/142 (34%)
Query: 3 GSSFGQASTSSAFGQSS-FGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXXX 61
G FG AST+ A G FG + ++P G LFG + T APA
Sbjct: 68 GGLFGGASTTPATGGGGLFGGSSTTAPATGG--GGLFGGSTTTAPATTGGLFGGSSTTAP 125
Query: 62 XXXX-------XXXXPQATTSATSGLFGNQQQPA-TNTTGGLFGASNTTFGQSKPAXXXX 113
P TT T GLFG A + TTGGLFGA+ +
Sbjct: 126 STTTGGLFGGSSTTTPSITT--TGGLFGGASTTAPSTTTGGLFGATTPATTATTTTGGLF 183
Query: 114 XXXXXXXXXXXXXXMFGQTNQA 135
+FG T A
Sbjct: 184 GGSTTTPSLTSGGGLFGATTPA 205
Score = 59 (25.8 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 217 TQATGSFFGTTPQPSMFGTNTSTAQPATS-LFGIVT 251
T +G FG++ PS T T+ P T LFG T
Sbjct: 389 TTTSGGLFGSSTTPSTTTTTTTATTPTTGGLFGSST 424
Score = 57 (25.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 220 TGSFFG-TTPQPS-----MFGTNTSTAQPATSLFGIVT 251
TG FG TTP + +FG +T+T LFG+ T
Sbjct: 298 TGGLFGATTPATTTTSGGLFGASTTTPSTTGGLFGVST 335
Score = 56 (24.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 18/39 (46%), Positives = 19/39 (48%)
Query: 217 TQATGSFFG--TTPQ--PSMFGTNTSTAQPATSLFGIVT 251
T TG FG TT PS T T+T P T LFG T
Sbjct: 348 TTTTGGLFGAATTSATTPSTT-TTTTTTTPTTGLFGSST 385
Score = 52 (23.4 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 220 TGSFFGTTPQPSMFGTNTSTAQPATS---LFGIVT 251
TG FG + + + TST P+T+ LFG T
Sbjct: 272 TGGLFGASTTTTTTPSTTSTTTPSTTTGGLFGATT 306
Score = 51 (23.0 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 220 TGSFFG-TTPQPSMFGTNTSTAQPATSLFGIVT 251
TG FG +T PS T T LFG T
Sbjct: 327 TGGLFGVSTTTPSTTSATTPTTTTTGGLFGAAT 359
Score = 49 (22.3 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 217 TQATGSFFGTTPQPSMFGTNT----STAQPATS----LFGIVT 251
T TG FG++ PS T+ S+A P+T+ LFG T
Sbjct: 413 TPTTGGLFGSSTTPSTTTTSGGLFGSSATPSTTSSGGLFGATT 455
Score = 48 (22.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 220 TGSFFG-TTPQPSMFGTNTSTAQPA-TS--LFGIVT 251
+G FG TTP + T TST P+ TS LFG T
Sbjct: 236 SGGLFGATTPAAT---TTTSTTTPSLTSGGLFGATT 268
Score = 45 (20.9 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 226 TTPQPSMFGTNTSTAQPATS--LFGIVT 251
TTP +FG++T T TS LFG T
Sbjct: 374 TTPTTGLFGSST-TPSTTTSGGLFGSST 400
Score = 44 (20.5 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 217 TQATGSFFGTTPQPS------MFGTNTSTAQPATS 245
T +G FG++ PS +FG T++A T+
Sbjct: 429 TTTSGGLFGSSATPSTTSSGGLFGATTTSATTTTT 463
Score = 43 (20.2 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 217 TQATGSFFGTTPQPSM-----FGTNTSTAQPATS 245
T G F G+T PS+ FG T A TS
Sbjct: 219 TSGGGLFGGSTTTPSLTSGGLFGATTPAATTTTS 252
Score = 42 (19.8 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 217 TQATGSFFGTTPQPSMFGTNTSTAQPATS--LFG 248
T ++G FG T + T T+T TS LFG
Sbjct: 444 TTSSGGLFGATTTSA---TTTTTTPTTTSGGLFG 474
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 226 TTPQPSMFGTNTSTAQPAT 244
TT +FGT+++T T
Sbjct: 466 TTTSGGLFGTSSTTTTTTT 484
>DICTYBASE|DDB_G0274915 [details] [associations]
symbol:DDB_G0274915 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0274915 EMBL:AAFI02000012 eggNOG:NOG12793
InterPro:IPR025574 Pfam:PF13634 RefSeq:XP_002649182.2
EnsemblProtists:DDB0266503 GeneID:8619570 KEGG:ddi:DDB_G0274915
OMA:INYKYNP Uniprot:Q555D2
Length = 1839
Score = 126 (49.4 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 60/258 (23%), Positives = 85/258 (32%)
Query: 6 FGQASTSSAFGQSSFGKPAFSSPG-FGATNNSL---FGQTATQAPAXXXXXXXXXXXXXX 61
FG AS+S+ FG S G FGA+++S ++T +
Sbjct: 1291 FG-ASSSTTPSTGLFGSATTPSTGLFGASSSSSSSSISSSSTTSTTTTPSTGLFGSTTPS 1349
Query: 62 XXXXXXXXPQATTSATSGLFGNQQQPATNTT----GGLFGA---SNTTFGQSKPAXXXXX 114
ATT+ ++GLFG+ T+TT GLFG+ S FG S PA
Sbjct: 1350 TGLFGSTTTAATTTPSTGLFGSTPSSTTSTTTTPPNGLFGSTTPSTALFGTSTPATTSTL 1409
Query: 115 XXXXXXXXXXXXXMFGQTNQAQPXXXXXXXXXXXXXXXXXXXXXXIKF-SPVTGTDTMMR 173
+FG ++ F S T T
Sbjct: 1410 TTSTSTTPSTG--LFGSSSSIATTTPSTGLFGSTSSSTTNTAPSTGLFGSTTTSTTATPF 1467
Query: 174 GGSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQGTQATGSFFGTTPQPSMF 233
G SS T +T + + S T GS T P +F
Sbjct: 1468 GSSSSTPSTGLFGSSSSSTSSSLSSSSTTATQPTGLFGSTAPSTGLFGSTTATNPSTGLF 1527
Query: 234 GTNTSTAQ---PATSLFG 248
G+ T+T+ P+T LFG
Sbjct: 1528 GSTTTTSTTTTPSTGLFG 1545
Score = 100 (40.3 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 33/112 (29%), Positives = 47/112 (41%)
Query: 1 MFGSSFGQASTSSAFGQSSFGKPAFSSPGFGATN-NSLFGQTA-------TQAPAXXXXX 52
+FGS+ A+T+ + G FG S+ T N LFG T T PA
Sbjct: 1352 LFGSTTTAATTTPSTGL--FGSTPSSTTSTTTTPPNGLFGSTTPSTALFGTSTPATTSTL 1409
Query: 53 XXXXXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNT--TGGLFGASNTT 102
ATT+ ++GLFG+ TNT + GLFG++ T+
Sbjct: 1410 TTSTSTTPSTGLFGSSSSIATTTPSTGLFGSTSSSTTNTAPSTGLFGSTTTS 1461
Score = 81 (33.6 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 217 TQATGSFFGTTPQPSMFGTNTSTAQPATSLFGIVT 251
TQ TG F T P +FG+ T+T P+T LFG T
Sbjct: 1498 TQPTGLFGSTAPSTGLFGSTTAT-NPSTGLFGSTT 1531
Score = 54 (24.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 226 TTPQPSMFGTNTSTAQPATSLFG 248
TTP +FG+++ST +T LFG
Sbjct: 1537 TTPSTGLFGSSSSTPS-STGLFG 1558
Score = 40 (19.1 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 4 SSFGQASTSSAFGQSSFGKPAFSSP 28
S FG ++T++A +SFG ++P
Sbjct: 862 SLFGSSNTTTAKPPASFGVNLSAAP 886
Score = 38 (18.4 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 1 MFGSSFGQASTSSAFGQSSF 20
MF S+F ++S+SS+ SS+
Sbjct: 73 MF-SNFDESSSSSSSSSSSY 91
>SGD|S000004650 [details] [associations]
symbol:NUP116 "FG-nucleoporin component of central core of
the nuclear pore complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005487 "nucleocytoplasmic transporter activity"
evidence=IGI;IPI] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore"
evidence=IMP;IPI] [GO:0005643 "nuclear pore" evidence=IEA;IDA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IMP] [GO:0006406 "mRNA export from nucleus" evidence=IPI]
[GO:0044613 "nuclear pore central transport channel" evidence=IDA]
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0006409 "tRNA export from nucleus" evidence=IMP] [GO:0016021
"integral to membrane" evidence=ISM] [GO:0006810 "transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006999
"nuclear pore organization" evidence=IMP] [GO:0006606 "protein
import into nucleus" evidence=IMP] [GO:0016973 "poly(A)+ mRNA
export from nucleus" evidence=IGI;IMP] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 SGD:S000004650 GO:GO:0031965
EMBL:BK006946 GO:GO:0006606 eggNOG:NOG12793 EMBL:Z48502
GO:GO:0000055 TCDB:9.A.14.1.1 GO:GO:0006409 GO:GO:0044614
GO:GO:0016973 GO:GO:0006999 GO:GO:0017056 GO:GO:0044613
GO:GO:0005487 GeneTree:ENSGT00700000104281 HOGENOM:HOG000093958
OrthoDB:EOG4P2T9R InterPro:IPR025574 Pfam:PF13634 SUPFAM:SSF82215
EMBL:Z15036 EMBL:X68108 PIR:S28925 RefSeq:NP_013762.1 PDB:2AIV
PDB:3PBP PDBsum:2AIV PDBsum:3PBP ProteinModelPortal:Q02630
SMR:Q02630 DIP:DIP-2389N IntAct:Q02630 MINT:MINT-441530
STRING:Q02630 PaxDb:Q02630 PeptideAtlas:Q02630 DNASU:855066
EnsemblFungi:YMR047C GeneID:855066 KEGG:sce:YMR047C CYGD:YMR047c
KO:K14297 OMA:SNSYGQH EvolutionaryTrace:Q02630 NextBio:978329
Genevestigator:Q02630 GermOnline:YMR047C Uniprot:Q02630
Length = 1113
Score = 119 (46.9 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 33/69 (47%), Positives = 38/69 (55%)
Query: 187 ITCMKEYENKSLEELRYEDYKANRK-GPQQGTQATGSFF----GTTPQP-SMFGTNTSTA 240
ITCM EY N S EELR++DY+A RK G Q TG+ F GTT + G N ST
Sbjct: 142 ITCMPEYRNFSFEELRFQDYQAGRKFGTSQN--GTGTTFNNPQGTTNTGFGIMGNNNSTT 199
Query: 241 QPATS-LFG 248
T LFG
Sbjct: 200 SATTGGLFG 208
Score = 100 (40.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 33/103 (32%), Positives = 42/103 (40%)
Query: 3 GSSFGQASTSSAFGQSSFGKPAFSSPGFGATNNS-LFGQTATQAPAXXXXXXXXXXXXXX 61
G FGQ + FG + F S GATN++ LFG ++T
Sbjct: 204 GGLFGQKPATGMFGTGTGSGGGFGS---GATNSTGLFG-SSTNLSGNSAFGANKPATSGG 259
Query: 62 XXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTTFG 104
P T+ T GLFG Q +NT GGLFG +FG
Sbjct: 260 LFGNTTNNPTNGTNNT-GLFGQQN---SNTNGGLFGQQQNSFG 298
Score = 63 (27.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 26/94 (27%), Positives = 36/94 (38%)
Query: 15 FGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXXXXXXXXXXXPQATT 74
FG S P+ ++ FG+T ++ GQ Q P TT
Sbjct: 2 FGVSRGAFPSATTQPFGSTGSTFGGQQQQQQPVANTSAFGLSQQTN------------TT 49
Query: 75 SATS-GLFGNQQQPATNTTGGLFGASNTTFGQSK 107
A + G FGNQ + G A+ T FGQS+
Sbjct: 50 QAPAFGNFGNQTSNSPFGMSGSTTANGTPFGQSQ 83
Score = 61 (26.5 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 34/112 (30%), Positives = 43/112 (38%)
Query: 1 MFGSSFGQ--ASTSSAFGQ--SSFG-KPAFSSPGFGATNNSLFG---QT-ATQAPAXXXX 51
MFG S G ++T+ FG S+FG + P N S FG QT TQAPA
Sbjct: 1 MFGVSRGAFPSATTQPFGSTGSTFGGQQQQQQP---VANTSAFGLSQQTNTTQAPAFGNF 57
Query: 52 XXXXXXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGA-SNTT 102
+T+A FG Q N +G +FG N T
Sbjct: 58 GNQTSNSPFGMS--------GSTTANGTPFGQSQLTNNNASGSIFGGMGNNT 101
Score = 58 (25.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 208 ANRKGPQQGTQATGSFFGTTPQP-SMFGTNTSTAQPATS--LFG 248
AN+ P +G FG+ P S+FG STA A+S +FG
Sbjct: 593 ANQNNP---ASTSGGLFGSKPATGSLFGGTNSTAPNASSGGIFG 633
Score = 55 (24.4 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 16/44 (36%), Positives = 19/44 (43%)
Query: 212 GPQQGT-------QATGSFFGTTPQPSMFGTNTSTAQPATSLFG 248
G QQGT A+G FG + FG NT+ LFG
Sbjct: 342 GQQQGTGALFGAKPASGGLFGQSAGSKAFGMNTNPTGTTGGLFG 385
Score = 37 (18.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 80 LFGNQQQPATNTTGGLFGASNTTFG 104
+FG + + T FG++ +TFG
Sbjct: 1 MFGVSRGAFPSATTQPFGSTGSTFG 25
>DICTYBASE|DDB_G0291390 [details] [associations]
symbol:nup98 "putative nucleoporin 98" species:44689
"Dictyostelium discoideum" [GO:0006810 "transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA;ISS] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0005215
"transporter activity" evidence=ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 dictyBase:DDB_G0291390
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0006913 GO:GO:0005215
eggNOG:NOG12793 GO:GO:0051028 InterPro:IPR025574 Pfam:PF13634
SUPFAM:SSF82215 KO:K14297 InterPro:IPR021967 Pfam:PF12110
OMA:DYNQGRR RefSeq:XP_635182.1 HSSP:Q9Y6J4
ProteinModelPortal:Q54EQ8 MEROPS:S59.A08 EnsemblProtists:DDB0235244
GeneID:8628128 KEGG:ddi:DDB_G0291390 Uniprot:Q54EQ8
Length = 2053
Score = 101 (40.6 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 32/75 (42%), Positives = 41/75 (54%)
Query: 181 NTRHVCITCMKEYENKSLEELRYEDYKANRKG----PQQGTQATGSFFGTTP--QPSM-F 233
NT V I+ M +Y ++S EELR+ED +RK G+ S FG+TP QPS F
Sbjct: 242 NT-FVSISAMPQYNDRSFEELRFEDI-THRKDIVYKTGGGSGGGNSLFGSTPTTQPSSPF 299
Query: 234 GTNTSTAQPATSLFG 248
G T+T Q LFG
Sbjct: 300 GAQTTT-QTTGGLFG 313
Score = 96 (38.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 38/102 (37%), Positives = 40/102 (39%)
Query: 3 GSSFGQASTSSAFGQSSFG--KPAFSSPGFGATNNSLFG-QTATQAPAXXXXXXXXXXXX 59
G FG S S G S FG +P G SLFG QT T
Sbjct: 361 GGLFG--SMPSTGGSSLFGSTQPTQQQTGGAQPTQSLFGGQTQT-----------TTSPF 407
Query: 60 XXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNT 101
PQ T + SGLFG QQ TNT GGLFGA T
Sbjct: 408 GSQTSTPFGQPQQTNTG-SGLFGAQQTQQTNTGGGLFGAQPT 448
Score = 89 (36.4 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 38/123 (30%), Positives = 46/123 (37%)
Query: 1 MFGSSFGQASTSSAFGQSSFGKPAFSSPG---FGATNNSL----FGQTA-TQAPAXXXXX 52
MFG FG A S FG P+ ++P FG+T S FG TA T P
Sbjct: 1 MFGGQFGSFGAKPAATASPFGAPS-AAPTTSLFGSTAPSSGFGGFGSTAQTTQPTTGGFG 59
Query: 53 XXXXXXXXXXXXXXXXXP-QATTSATSGLFGNQ-----QQPATNTTGGLFGASNTTFGQS 106
P + SGLFG+ QQP + GG FG + TT Q
Sbjct: 60 GFGGFGGATTTQQPAASPFGGGGTGGSGLFGSSAQTTTQQPGASPFGGGFGTTTTTTTQQ 119
Query: 107 KPA 109
A
Sbjct: 120 PGA 122
Score = 86 (35.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 27/86 (31%), Positives = 34/86 (39%)
Query: 25 FSSPGFGATNNSLFGQTATQAPAX-XXXXXXXXXXXXXXXXXXXXXP-QATTSATSG--L 80
+ + G NSLFG T T P+ P TSAT G L
Sbjct: 274 YKTGGGSGGGNSLFGSTPTTQPSSPFGAQTTTQTTGGLFGGQTTTSPFGGQTSATPGSSL 333
Query: 81 FGNQQQPATNTTGGLFGASNTTFGQS 106
FG+ Q T+GGLFG+ T Q+
Sbjct: 334 FGSTQPTQQQTSGGLFGSVQPTQQQA 359
Score = 78 (32.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/120 (31%), Positives = 44/120 (36%)
Query: 4 SSFGQASTSSAFGQSSFGKPAFSS-P---GFGATNNSLFGQTATQAPAXX-XXXXXXXXX 58
S FG + SS FG FG A ++ P GFG G T TQ PA
Sbjct: 30 SLFGSTAPSSGFG--GFGSTAQTTQPTTGGFGGFGG-FGGATTTQQPAASPFGGGGTGGS 86
Query: 59 XXXXXXXXXXXPQATTSATSGLFGNQ-----QQPATN----TTGGLFGASNTTFGQSKPA 109
Q S G FG QQP + T GGLFG+S T Q + A
Sbjct: 87 GLFGSSAQTTTQQPGASPFGGGFGTTTTTTTQQPGASPFGGTGGGLFGSSAQTTTQQQGA 146
Score = 78 (32.5 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 214 QQGTQATGSFFGTTPQPS-----MFGTNTSTAQPATSLFGIVT 251
Q + G FG+ QPS +FG+N TAQP TSLFG T
Sbjct: 574 QPSSNPGGGLFGSA-QPSTTTGGLFGSNQPTAQPTTSLFGNTT 615
Score = 77 (32.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 19/37 (51%), Positives = 20/37 (54%)
Query: 212 GPQQGTQATGSFFGTTPQPSMFGTNTSTAQPATSLFG 248
G Q TQ TG FG S FG TS A P +SLFG
Sbjct: 300 GAQTTTQTTGGLFGGQTTTSPFGGQTS-ATPGSSLFG 335
Score = 74 (31.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 39/148 (26%), Positives = 48/148 (32%)
Query: 1 MFGSSFGQAST----SSAFGQSSFGKPAFSS---PG---FGATNNSLFGQTATQAPAXXX 50
+FGSS Q +T +S FG FG ++ PG FG T LFG +A
Sbjct: 88 LFGSS-AQTTTQQPGASPFG-GGFGTTTTTTTQQPGASPFGGTGGGLFGSSAQ-----TT 140
Query: 51 XXXXXXXXXXXXXXXXXXXPQATTSATSGL--FGNQQQPATNTTGGLFGASNTTFGQSKP 108
P + AT G FG T GG GA++ FG S
Sbjct: 141 TQQQGASPFGGFGGATTTQPSLLSGATGGFGGFGGSTTSGTQLGGG-GGATSGAFGGSSS 199
Query: 109 AXXXXXXXXXXXXXXXXXXMFGQTNQAQ 136
FG T Q Q
Sbjct: 200 PFGGSGGATTSSPFGGGGGSFGATTQKQ 227
>POMBASE|SPAC1486.05 [details] [associations]
symbol:nup189 "nucleoporin Nup98 and Nup96" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005643 "nuclear pore" evidence=IDA] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0006997 "nucleus
organization" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=ISM] [GO:0015031 "protein transport" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP]
InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434 PomBase:SPAC1486.05
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR GO:GO:0015031
GO:GO:0031965 eggNOG:NOG12793 GO:GO:0008233 GO:GO:0051028
GO:GO:0006997 GO:GO:0031080 GO:GO:0006407 OrthoDB:EOG4P2T9R
InterPro:IPR025574 Pfam:PF13634 SUPFAM:SSF82215 KO:K14297
InterPro:IPR021967 Pfam:PF12110 EMBL:D89145 PIR:T42421 PIR:T50074
RefSeq:NP_594093.1 ProteinModelPortal:Q9UTK4 IntAct:Q9UTK4
STRING:Q9UTK4 MEROPS:S59.A07 EnsemblFungi:SPAC1486.05.1
GeneID:2541547 KEGG:spo:SPAC1486.05 OMA:DYNQGRR NextBio:20802644
Uniprot:Q9UTK4
Length = 1778
Score = 127 (49.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 38/101 (37%), Positives = 45/101 (44%)
Query: 3 GSSFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXXXX 62
GS FG A+T+ G + FG S+PG G LFG T T
Sbjct: 514 GSLFGNANTA---GSNMFGSANSSTPGTG-----LFGSTQTNNATSNTGTGLFGSNNANT 565
Query: 63 XXXXXXXPQATTSATSGLFGNQ--QQPATNTTGGLFGASNT 101
++ T GLFGN QQP+T TT GLFGASNT
Sbjct: 566 TNTGGSLFNKPSTTTGGLFGNTTAQQPST-TTSGLFGASNT 605
Score = 119 (46.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 40/138 (28%), Positives = 50/138 (36%)
Query: 3 GSSFGQAS---TSSAFGQS-SFGKPA--FSSPGFGATNNSL-FGQTATQAPAXXXXXXXX 55
G FG AS T+SAFG + +FG F G TNN+ FG T+
Sbjct: 224 GRRFGNASSTNTTSAFGSTPAFGASTTPFGQNLSGTTNNATPFG-TSNATNTTPGSGLFG 282
Query: 56 XXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTTFGQSKPAXXXXXX 115
T +A+ GLFG + + GLFG S TF Q KPA
Sbjct: 283 GGSAFGSNTTNTGFGSGTNNASGGLFGQNNNTTSTPSTGLFGGS--TFNQQKPAFSGFGS 340
Query: 116 XXXXXXXXXXXXMFGQTN 133
+FG N
Sbjct: 341 TTNTTNTGTGTGLFGSNN 358
Score = 100 (40.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/67 (41%), Positives = 34/67 (50%)
Query: 187 ITCMKEYENKSLEELRYEDYKANRKGPQQGTQATGSFFGTTP----QPSMFGTNTS-TAQ 241
ITCM Y + S EELR +DY R+ + T S FG+TP + FG N S T
Sbjct: 202 ITCMPAYRSYSFEELRLQDYNQGRRFGNASSTNTTSAFGSTPAFGASTTPFGQNLSGTTN 261
Query: 242 PATSLFG 248
AT FG
Sbjct: 262 NATP-FG 267
Score = 78 (32.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 40/122 (32%), Positives = 50/122 (40%)
Query: 1 MFG--SSFGQASTSSAFGQSS------FGKPAFSSPG---FGATNNSL--FGQTATQAPA 47
MFG +S G + AFGQ++ FG + ++PG FG+ N S FGQ TQ P
Sbjct: 1 MFGQNNSSGFGGGTGAFGQNNQQTGGLFGSNS-NTPGNTLFGSQNTSTTGFGQNTTQ-PL 58
Query: 48 XXXXXXXXXXXXXXXXXXXXXXPQATTSATSGLFGNQQQPA---TNTT-----GGLFGAS 99
+S T G+FG PA TN GGLFG S
Sbjct: 59 FGSNTNGGLFGNRNNTTTTGGTGFGMSSGT-GMFGQSNTPAFGGTNNATNPSGGGLFG-S 116
Query: 100 NT 101
NT
Sbjct: 117 NT 118
Score = 58 (25.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 216 GTQATGSFFGTTPQPSMFG---TNTSTAQPATSLFG 248
G+ GS +TP +FG TN +T+ T LFG
Sbjct: 524 GSNMFGSANSSTPGTGLFGSTQTNNATSNTGTGLFG 559
Score = 55 (24.4 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 212 GPQQGTQATGSF-FG----TTPQPSMFGTNTSTAQPA-TSLFG 248
G T A+G F FG P+P+ T T+ +PA T LFG
Sbjct: 453 GSTTTTPASGGFSFGQNANNAPKPAFGSTATTAPKPAGTGLFG 495
Score = 50 (22.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 217 TQATGSFFG--TTPQPSMFGTNTSTAQPATSLFGI 249
T GS F +T +FG NT+ QP+T+ G+
Sbjct: 566 TNTGGSLFNKPSTTTGGLFG-NTTAQQPSTTTSGL 599
Score = 50 (22.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 220 TGSFFGTTP--QPS-----MFGTNTSTAQPATSLFG 248
TG FG T QPS +FG + + Q TS FG
Sbjct: 580 TGGLFGNTTAQQPSTTTSGLFGASNTNNQAQTSNFG 615
Score = 50 (22.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 206 YKANRKGPQQGTQATGSFFGTTPQPSMFGTNTSTA-QPATSLFGIVT 251
+ AN T T +F G FG N + A +P+ FG T
Sbjct: 410 FGANNNTANNNTAPTSTFGGNNSSNFSFGANNNAATKPSGFGFGSTT 456
Score = 44 (20.5 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 213 PQQGTQATGSF-FGTTPQPSMFGTNTSTAQPATSLFG 248
P GT TG F FG + N +TA P TS FG
Sbjct: 398 PNSGTMGTGLFGFGANNNTA----NNNTA-P-TSTFG 428
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 216 GTQATGSFFGTTPQPSMFGTNTSTAQPATSLFG 248
G ATG+ G FG+NT+ QP + G
Sbjct: 373 GGAATGTGTGFGSSTGGFGSNTNN-QPNSGTMG 404
Score = 43 (20.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 219 ATGSFFGTTPQPS---MFG-----TNTSTAQPAT----SLFG 248
A GS T P+P+ +FG NT+TA AT SLFG
Sbjct: 477 AFGSTATTAPKPAGTGLFGGLGAGANTNTATNATGTGGSLFG 518
Score = 39 (18.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 229 QPSMFGTNTSTAQPATSLF 247
+PS FG ++T PA+ F
Sbjct: 446 KPSGFGFGSTTTTPASGGF 464
>UNIPROTKB|G4MSW8 [details] [associations]
symbol:MGG_04617 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
GO:GO:0006810 GO:GO:0005643 EMBL:CM001232 InterPro:IPR025574
Pfam:PF13634 SUPFAM:SSF82215 KO:K14297 InterPro:IPR021967
Pfam:PF12110 RefSeq:XP_003713629.1 ProteinModelPortal:G4MSW8
EnsemblFungi:MGG_04617T0 GeneID:2677933 KEGG:mgr:MGG_04617
Uniprot:G4MSW8
Length = 1906
Score = 118 (46.6 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 41/121 (33%), Positives = 54/121 (44%)
Query: 3 GSSFGQASTSSAFGQSSFGKPAFSSPG------FGATNNSL--------FGQTATQAPAX 48
GS+FG +T+SAFG ++ K AF S G FGA++N+ FG + T APA
Sbjct: 70 GSAFGSNNTTSAFGANNANKTAFGSTGTTGGGLFGASSNTTAAPSAFGGFGSSTTAAPAT 129
Query: 49 XXXXXXXXXXXXXX-XXXXXXXPQATTSATSG-LFGNQQQPATNTTGGLFGASN-TTFGQ 105
TT AT G LFG +TTGG FG++ + FG
Sbjct: 130 SAFGGGTSLFGASKPATTTGGFGSGTTGATGGSLFGGG-----STTGGAFGSTTGSAFGA 184
Query: 106 S 106
S
Sbjct: 185 S 185
Score = 108 (43.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 40/116 (34%), Positives = 47/116 (40%)
Query: 3 GSSFGQASTSSAFG-QSSFGKPA-FSS------PGFGATNNS--LFGQTATQAPAXXXXX 52
G +G + + AFG SSFG F + GFG T LFG TQ
Sbjct: 247 GRRYGNGTGTGAFGVNSSFGSGGGFGTNNNTGGTGFGTTTTGGGLFGNNNTQTTTSAFGS 306
Query: 53 XXXXXXXXXXXXXXXXXPQATTSATSGLFGNQQ-QPATNTTGGLFGASNTT-FGQS 106
Q A GLFG+ QPA T GGLFGASNT+ FG +
Sbjct: 307 QPAATGGFGSGGGGLFGAQQNKPA-GGLFGSSTTQPAAQT-GGLFGASNTSAFGSN 360
Score = 103 (41.3 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 38/110 (34%), Positives = 45/110 (40%)
Query: 3 GSSFGQASTS---SAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXX 59
G FGQ++T+ SAFG +FG S FG NN+ FG T
Sbjct: 7 GFGFGQSNTTQQPSAFGGGAFGSSNTGS-AFGQNNNTTFGANNTNTGGGLFGGGAASTGG 65
Query: 60 XXXXXXXXXXPQATTSATSGLFGNQQQ-PATNTTGG-LFGAS-NTTFGQS 106
TTSA N+ +T TTGG LFGAS NTT S
Sbjct: 66 FGSTGSAFGSNN-TTSAFGANNANKTAFGSTGTTGGGLFGASSNTTAAPS 114
Score = 57 (25.1 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 212 GPQQGTQATGSFFGTT-PQPSMFGTNTSTAQPATS-LFG 248
G Q Q T S FG P +FG++T+T LFG
Sbjct: 463 GGQNQQQGTSSLFGQNKPAGGLFGSSTTTTNTGGGGLFG 501
Score = 46 (21.3 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 214 QQGTQATGSFFGTTPQPS-----MFGTNTSTAQP 242
QQ Q G FG + Q S +FG + + AQP
Sbjct: 603 QQQQQQGGGLFGGSQQQSTLGNSLFGNSQNQAQP 636
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 215 QGTQATGSFFGTTPQPSMFGTNTSTAQPATSLFGIVT 251
Q TG FG + S FG+N +T + FG T
Sbjct: 340 QPAAQTGGLFGAS-NTSAFGSNNNTT--TSGAFGSST 373
Score = 44 (20.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 212 GPQQGTQATGSFFGTTPQPS-----MFG-TNTS 238
G QQ A G F +T QP+ +FG +NTS
Sbjct: 323 GAQQNKPAGGLFGSSTTQPAAQTGGLFGASNTS 355
Score = 42 (19.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 214 QQGTQATGSFFGTT-----PQPSMFGTNTST 239
QQ A GS FG + +PS+FG + T
Sbjct: 563 QQQPAAGGSLFGGSLGQNQQKPSLFGNSQGT 593
Score = 41 (19.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 221 GSFFGTT---PQPSMFGTNTSTAQPATSLFGI 249
G FG P +FG+ ST QPA G+
Sbjct: 319 GGLFGAQQNKPAGGLFGS--STTQPAAQTGGL 348
Score = 40 (19.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 17/45 (37%), Positives = 19/45 (42%)
Query: 214 QQGTQATGSFFG------TTPQP----SMFGTNTSTAQPATSLFG 248
QQG G FG T QP S+FG + Q SLFG
Sbjct: 545 QQGATG-GGLFGNAGASQTQQQPAAGGSLFGGSLGQNQQKPSLFG 588
Score = 39 (18.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 217 TQATGSFFGTTPQPSM-FGTNTST---AQ---PATSLFGIVT 251
TQ T S FG+ P + FG+ AQ PA LFG T
Sbjct: 297 TQTTTSAFGSQPAATGGFGSGGGGLFGAQQNKPAGGLFGSST 338
>WB|WBGene00003797 [details] [associations]
symbol:npp-11 species:6239 "Caenorhabditis elegans"
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0006997 "nucleus organization" evidence=IMP]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IMP] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR007758
InterPro:IPR026010 Pfam:PF05064 GO:GO:0009792 GO:GO:0000132
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0005635
GO:GO:0002119 GO:GO:0005643 GO:GO:0040035 eggNOG:NOG12793
GO:GO:0006997 GO:GO:0017056 PANTHER:PTHR12084 KO:K14306
GeneTree:ENSGT00700000104281 InterPro:IPR025574 Pfam:PF13634
EMBL:FO080750 PIR:T25795 RefSeq:NP_491232.1
ProteinModelPortal:O01576 SMR:O01576 DIP:DIP-25053N IntAct:O01576
MINT:MINT-1102262 STRING:O01576 PaxDb:O01576
EnsemblMetazoa:F53F10.5.1 EnsemblMetazoa:F53F10.5.2 GeneID:171954
KEGG:cel:CELE_F53F10.5 UCSC:F53F10.5.1 CTD:171954 WormBase:F53F10.5
InParanoid:O01576 OMA:RFASRHD NextBio:873405 Uniprot:O01576
Length = 805
Score = 111 (44.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 41/146 (28%), Positives = 53/146 (36%)
Query: 1 MFGSSFGQASTSSAFGQ--SSFGKPA---FSSPGFGATNNSLFGQTATQ--APAXXXXXX 53
+FGSS A+T+ G SS P+ F S A LFG T+T AP+
Sbjct: 142 LFGSSTSTATTAPTGGLFGSSTAAPSSGLFGSTAAPAAPGGLFGSTSTSTAAPSGGLFGS 201
Query: 54 XXXXXXXX---XXXXXXXXPQATTSA-TSGLFGNQQQPATNTTGGLFGASNTTFGQSKPA 109
P + +A TSGLFGN AT ++GGLFGA+ S
Sbjct: 202 SAAPTSTAPAPSGGLFGAAPATSNAAPTSGLFGNSAPAATASSGGLFGAAPKPAAPSGGL 261
Query: 110 XXXXXXXXXXXXXXXXXXMFGQTNQA 135
+FG A
Sbjct: 262 FGSTAPATTAATTTATSGLFGAPTSA 287
Score = 110 (43.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 38/133 (28%), Positives = 50/133 (37%)
Query: 1 MFGSSFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXX 60
+FG+S A+ + G S G + S+P G NS TA APA
Sbjct: 297 LFGASTAPAAATG--GLFSIGAASASTPSVGLFGNSSASTTAAAAPATAPAAASTGGLFG 354
Query: 61 XXXXXXXXXPQATTSATSGLFGNQQQ-PATNT-TGGLFGASNTTFGQSKP-AXXXXXXXX 117
P T+S T GLFG+ PA + TGGLFG+S + P A
Sbjct: 355 ATTAAAAA-P--TSSTTGGLFGSTAAAPAASLPTGGLFGSSTPAKTPAAPTAGLFGASST 411
Query: 118 XXXXXXXXXXMFG 130
+FG
Sbjct: 412 TTTSAPATGSLFG 424
Score = 100 (40.3 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 34/102 (33%), Positives = 45/102 (44%)
Query: 1 MFGSSFGQASTSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXX 60
+FG+S +T S FG SS PA +S G +FG + APA
Sbjct: 61 LFGNS---TATGSMFGGSSAAAPAPASAG-------IFGNSGAAAPAPASTSIFGSSANS 110
Query: 61 XXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNTT 102
A SA +G+FG +PA TGGLFG+S +T
Sbjct: 111 AAPATVTFGASAP-SAGAGMFG-ANKPAA-PTGGLFGSSTST 149
Score = 61 (26.5 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 217 TQATGS-FFGTTPQPS----MFG-TNTSTAQPATSLFG 248
T A S FG+T P+ +FG T+TSTA P+ LFG
Sbjct: 163 TAAPSSGLFGSTAAPAAPGGLFGSTSTSTAAPSGGLFG 200
Score = 55 (24.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 219 ATGSFFGTTPQPSMFGTNTSTAQPATSLFGI 249
ATGS FGT P + T TS A PA S G+
Sbjct: 418 ATGSLFGTAPATT---TATSAA-PAASTGGL 444
Score = 53 (23.7 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 217 TQATGSFFGTT---PQPSMFGTNTSTAQPATSLFG 248
T TG FG++ P +FG+ + A P LFG
Sbjct: 152 TAPTGGLFGSSTAAPSSGLFGSTAAPAAPG-GLFG 185
Score = 50 (22.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 216 GTQATGSFFGTTPQPSMFGTNTSTAQ----PATSLFGIVT 251
G +T + T P +FG T+TA P LFG T
Sbjct: 446 GASSTTTPASTAPTGGLFGAATTTAPAAAAPTGGLFGAAT 485
Score = 47 (21.6 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/49 (40%), Positives = 23/49 (46%)
Query: 217 TQATGSFFG--TTPQPS-------MFGTNTSTAQPAT-----SLFGIVT 251
T TG FG TT P+ +FG T+TA PAT LFG T
Sbjct: 456 TAPTGGLFGAATTTAPAAAAPTGGLFGAATTTA-PATVGPTGGLFGAAT 503
Score = 45 (20.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 217 TQATGSFFGTT--------PQPSMFGTNT---STAQPATSLFG 248
+ TG FG+T P +FG++T + A P LFG
Sbjct: 365 SSTTGGLFGSTAAAPAASLPTGGLFGSSTPAKTPAAPTAGLFG 407
Score = 43 (20.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 217 TQATGSFFGT-TPQPS-------MFGTNTSTAQPATSLFGI 249
T AT FG T PS +FG +T+ A LF I
Sbjct: 274 TTATSGLFGAPTSAPSSAPATGGLFGASTAPAAATGGLFSI 314
Score = 42 (19.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 216 GTQATGSFFGTTPQPSMFGTN----TSTAQPATS 245
G + G+ +TP +FG + T+ A PAT+
Sbjct: 310 GLFSIGAASASTPSVGLFGNSSASTTAAAAPATA 343
>ASPGD|ASPL0000029682 [details] [associations]
symbol:sonB species:162425 "Emericella nidulans"
[GO:0034399 "nuclear periphery" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0005816 "spindle pole body" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006810
"transport" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031080 "nuclear pore outer ring" evidence=IEA]
[GO:0006997 "nucleus organization" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007230 Pfam:PF04096
PROSITE:PS51434 GO:GO:0006810 GO:GO:0005643 EMBL:AACD01000098
EMBL:BN001305 InterPro:IPR025574 Pfam:PF13634 SUPFAM:SSF82215
KO:K14297 InterPro:IPR021967 Pfam:PF12110 OMA:DYNQGRR
RefSeq:XP_663231.1 ProteinModelPortal:G5EB32
EnsemblFungi:CADANIAT00003443 GeneID:2871918 KEGG:ani:AN5627.2
HOGENOM:HOG000191109 Uniprot:G5EB32
Length = 1962
Score = 94 (38.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 37/94 (39%), Positives = 45/94 (47%)
Query: 162 FSPVTGTDTMMRGGSSQTINTRHVCITCMKEYENKSLEELRYEDYKANRK---GPQQ--- 215
FSP T DT +S +N + I+ M+ Y S EELR DY R+ G Q
Sbjct: 188 FSPFTEKDT-----ASNVMN-HYQSISFMQPYNKYSFEELRLGDYNQGRRYGNGSGQAGA 241
Query: 216 -GTQATG--SFFGTTPQPSMFG-TNTSTAQPATS 245
GT A G S FGT Q + FG T+T ATS
Sbjct: 242 FGTSAFGGGSGFGTQQQSTGFGSTSTPFGAAATS 275
Score = 83 (34.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 36/115 (31%), Positives = 49/115 (42%)
Query: 2 FGSSFGQAS---TSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXX 58
FGS+ Q+S T S FG SS G +S FG +N + G A +
Sbjct: 10 FGSNNQQSSGFGTGSGFGTSSGGGFGSTSSPFGGSNTTSGGGLFGNASSSFGSGGGFGTN 69
Query: 59 XXXXXXXXXXXPQATT---SATSG--LFGNQQQPATNTTG-GLFGASNTT-FGQS 106
+ TT S TSG LFG+ A+ G G FG+++T+ FG S
Sbjct: 70 TQNSGSAFGTQNRPTTGFGSTTSGGGLFGSNNAGASTGGGFGGFGSTSTSGFGSS 124
Score = 77 (32.2 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 27/102 (26%), Positives = 39/102 (38%)
Query: 5 SFGQASTSSAFGQSSFGKPAFSS-PGFGATNNSLFGQTATQAPAXXXXXXXXXXXXXXXX 63
SFG S FG ++ F + GFG ++ FG T++
Sbjct: 2 SFGGGF--SGFGSNNQQSSGFGTGSGFGTSSGGGFGSTSSPFGGSNTTSGGGLFGNASSS 59
Query: 64 XXXXXXPQATTSATSGLFGNQQQPAT---NTT--GGLFGASN 100
T + FG Q +P T +TT GGLFG++N
Sbjct: 60 FGSGGGFGTNTQNSGSAFGTQNRPTTGFGSTTSGGGLFGSNN 101
>SGD|S000001551 [details] [associations]
symbol:NUP100 "FG-nucleoporin component of central core of
the nuclear pore complex" species:4932 "Saccharomyces cerevisiae"
[GO:0017056 "structural constituent of nuclear pore"
evidence=IMP;IDA;IPI] [GO:0000973 "posttranscriptional tethering of
RNA polymerase II gene DNA at nuclear periphery" evidence=IMP]
[GO:0005487 "nucleocytoplasmic transporter activity"
evidence=IGI;IPI] [GO:0031990 "mRNA export from nucleus in response
to heat stress" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IEA;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IPI] [GO:0036228 "protein targeting to nuclear inner
membrane" evidence=IGI] [GO:0044613 "nuclear pore central transport
channel" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0016021 "integral to membrane"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IGI]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
SGD:S000001551 GO:GO:0045893 GO:GO:0031965 EMBL:BK006944
eggNOG:NOG12793 GO:GO:0031990 GO:GO:0006607 TCDB:9.A.14.1.1
EMBL:X75780 GO:GO:0000973 GO:GO:0036228 GO:GO:0017056 GO:GO:0044613
GO:GO:0005487 EMBL:Z15035 EMBL:Z28068 PIR:B44402 RefSeq:NP_012855.1
ProteinModelPortal:Q02629 SMR:Q02629 DIP:DIP-2351N IntAct:Q02629
MINT:MINT-519762 STRING:Q02629 PaxDb:Q02629 PeptideAtlas:Q02629
DNASU:853796 EnsemblFungi:YKL068W GeneID:853796 KEGG:sce:YKL068W
CYGD:YKL068w GeneTree:ENSGT00700000104281 HOGENOM:HOG000093958
OMA:QGSGMGS OrthoDB:EOG4P2T9R NextBio:974937 Genevestigator:Q02629
GermOnline:YKL068W InterPro:IPR025574 Pfam:PF13634 SUPFAM:SSF82215
Uniprot:Q02629
Length = 959
Score = 111 (44.1 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 45/152 (29%), Positives = 54/152 (35%)
Query: 3 GSSFGQAS--TSSAFGQ------SSFG-KPAFSSPGFGATNNSLFGQTATQAPAXXXXXX 53
GS FGQ S T++AFG SSFG KP S FG +NN+L G T
Sbjct: 219 GSLFGQQSQNTNNAFGNQNQLGGSSFGSKPVGSGSLFGQSNNTL-GNTTNNRNGLFGQMN 277
Query: 54 XXXXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNT--------TFGQ 105
++T G NQ Q N LFG +NT FGQ
Sbjct: 278 SSNQGSSNSGLFGQNSMNSSTQGVFGQNNNQMQINGNNNNSLFGKANTFSNSASGGLFGQ 337
Query: 106 SKPAXXXXXXXXXXXXXXXXXXMFGQTNQAQP 137
+ +FGQ NQ QP
Sbjct: 338 NNQQQGSGLFGQNSQTSGSSG-LFGQNNQKQP 368
Score = 49 (22.3 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 220 TGSFFG----TTPQPS---MFGTNT--STAQPATSLFG 248
TGS FG +T PS +FG N ST+ T LFG
Sbjct: 472 TGSLFGNNTASTTVPSTNGLFGNNANNSTSTTNTGLFG 509
Score = 46 (21.3 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 209 NRKGPQQGTQA-TGSFFGTTPQPSMFGTNTSTAQPATSLFG 248
N+K P TQ+ TG G +FG N + Q +T LFG
Sbjct: 364 NQKQPNTFTQSNTG--IG------LFGQNNNQQQQSTGLFG 396
Score = 45 (20.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 223 FFGTTPQPSMFG---TNTSTAQPATSLFG 248
F GTT +FG TN+S LFG
Sbjct: 542 FGGTTQNTGLFGATGTNSSAVGSTGKLFG 570
>CGD|CAL0003324 [details] [associations]
symbol:orf19.5930 species:5476 "Candida albicans" [GO:0005487
"nucleocytoplasmic transporter activity" evidence=IEA] [GO:0017056
"structural constituent of nuclear pore" evidence=IEA] [GO:0044613
"nuclear pore central transport channel" evidence=IEA] [GO:0044614
"nuclear pore cytoplasmic filaments" evidence=IEA] [GO:0016973
"poly(A)+ mRNA export from nucleus" evidence=IEA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IEA]
[GO:0000973 "posttranscriptional tethering of RNA polymerase II
gene DNA at nuclear periphery" evidence=IEA] [GO:0031990 "mRNA
export from nucleus in response to heat stress" evidence=IEA]
CGD:CAL0003324 eggNOG:NOG12793 EMBL:AACQ01000003 EMBL:AACQ01000004
RefSeq:XP_722995.1 RefSeq:XP_723142.1 STRING:Q5ANH3 GeneID:3635247
GeneID:3635408 KEGG:cal:CaO19.13351 KEGG:cal:CaO19.5930
Uniprot:Q5ANH3
Length = 366
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 41/144 (28%), Positives = 52/144 (36%)
Query: 2 FGSS-FGQAS--TSSAFGQSSFGKPAFSSPGFGATNNSLFGQTA-TQAPAXXXXXXXXXX 57
FGSS FG S T+SAFGQS FG FS +++S FGQ T P+
Sbjct: 114 FGSSGFGAKSNPTASAFGQSGFGSSGFSQTNTSNSSSSPFGQMGNTNKPSPFGTTASQPS 173
Query: 58 XXXXXXXXXXX---XPQATTSATSGLFGNQQQPAT--NTTGGLFGASNTTFGQSKPAXXX 112
P T+ ++ FG+ T T FG+SN S P
Sbjct: 174 AFGSTATQPSNNKPSPFGQTNTSNSPFGSNTAATTAPTNTSSPFGSSNNN--TSNPFGGQ 231
Query: 113 XXXXXXXXXXXXXXXMFGQTNQAQ 136
FG +NQ Q
Sbjct: 232 SSTSSPFGQTQTSSSTFGASNQTQ 255
>WB|WBGene00003787 [details] [associations]
symbol:npp-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0006997 "nucleus organization" evidence=IMP]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IGI;IMP] [GO:0009786 "regulation of asymmetric cell
division" evidence=IMP] [GO:0042659 "regulation of cell fate
specification" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0045977 "positive regulation of mitotic cell cycle, embryonic"
evidence=IMP] [GO:0006999 "nuclear pore organization" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005516 "calmodulin binding"
evidence=IPI] InterPro:IPR024864 GO:GO:0009792 GO:GO:0000132
GO:GO:0006898 GO:GO:0040007 GO:GO:0005635 GO:GO:0002119
GO:GO:0016246 GO:GO:0048477 GO:GO:0000910 GO:GO:0009786
GO:GO:0042659 GO:GO:0045977 GO:GO:0006999 EMBL:Z70284
InterPro:IPR025712 PANTHER:PTHR13000 Pfam:PF13874
GeneTree:ENSGT00390000013620 KO:K14308 GeneID:177836
KEGG:cel:CELE_K07F5.13 UCSC:K07F5.13b.1 CTD:177836
HOGENOM:HOG000017163 NextBio:898584 PIR:T23424 RefSeq:NP_501770.1
ProteinModelPortal:Q9U3B9 STRING:Q9U3B9 EnsemblMetazoa:K07F5.13c
WormBase:K07F5.13c InParanoid:Q9U3B9 ArrayExpress:Q9U3B9
Uniprot:Q9U3B9
Length = 639
Score = 106 (42.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 32/96 (33%), Positives = 41/96 (42%)
Query: 10 STSSAFGQSSFGKPAFSSPGFGATNNSLFGQTATQAPAXXXXXXXXXXXXXXXXXXXXXX 69
S+ + FG ++ KP F S ++ SLFG T T P+
Sbjct: 25 SSGTLFGSTTPSKPLFGSTAQASSTPSLFGTTNTSTPSGGLFGKTGTSTTTTSTAGTLFG 84
Query: 70 PQATTS-ATSGLFGNQQQPATNTTGGLFGASNTTFG 104
TTS AT LFG +TTG LFG S+TT G
Sbjct: 85 AAPTTSTATPSLFG------ASTTG-LFGTSSTTSG 113
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 216 GTQATGSFFGTTPQPSMFGTNTSTAQPATS-LFG 248
G +TG+ G+T +FG+ STA+PAT FG
Sbjct: 198 GAASTGTAAGST----LFGS--STAKPATGGFFG 225
Score = 42 (19.8 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 212 GPQQGTQATGSFFGTTPQPSMFGTNTSTAQ 241
G ATG FFG++ ++ G + Q
Sbjct: 212 GSSTAKPATGGFFGSSSGSTLGGLGATQQQ 241
>UNIPROTKB|G4MTW8 [details] [associations]
symbol:MGG_01590 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007758 InterPro:IPR026010 Pfam:PF05064
GO:GO:0005643 EMBL:CM001232 GO:GO:0017056 PANTHER:PTHR12084
KO:K14306 InterPro:IPR025574 Pfam:PF13634 RefSeq:XP_003714569.1
EnsemblFungi:MGG_01590T0 GeneID:2679304 KEGG:mgr:MGG_01590
Uniprot:G4MTW8
Length = 674
Score = 93 (37.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 33/111 (29%), Positives = 44/111 (39%)
Query: 3 GSSFGQASTSSAFGQSSFG---KPAFSSPGFGA----TNNSLFGQ----TATQAPAXXXX 51
G FG A+ + A SF K + + G GA T LFG T Q P+
Sbjct: 22 GGLFGAAAAAGASSTPSFSFGNKSSTPATGAGAAQPSTGGGLFGNSSSTTTAQTPSIFGA 81
Query: 52 XXXXXXXXXXXXXXX-XXXPQATTSATSGLFGNQQQPATNTTGGLFGASNT 101
+ T ++ GLFGN +PA TGGLFG++ T
Sbjct: 82 KPASTTTATAATSGAPLFGGVSNTGSSGGLFGNASKPAQ--TGGLFGSAAT 130
Score = 63 (27.2 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 213 PQQGTQATGSFFGTTPQPSMFGTNTSTAQPATSL 246
P AT S GT QP+ NTST P +SL
Sbjct: 426 PATAADATKSTTGTAGQPAASALNTSTMGPTSSL 459
>UNIPROTKB|F1S0W9 [details] [associations]
symbol:NUP214 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0006611 "protein export from nucleus" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=IEA] [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=IEA] InterPro:IPR001680
InterPro:IPR015943 SMART:SM00320 Gene3D:2.130.10.10 GO:GO:0051726
GO:GO:0006606 GO:GO:0006406 GO:GO:0006611 InterPro:IPR026054
PANTHER:PTHR23193 GO:GO:0005487 GeneTree:ENSGT00700000104281
OMA:FGQSPGF EMBL:FP236754 Ensembl:ENSSSCT00000006280
ArrayExpress:F1S0W9 Uniprot:F1S0W9
Length = 2081
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 47/119 (39%), Positives = 60/119 (50%)
Query: 2 FGS-SFGQASTSSAFGQSSFGK-PAF----SSPG--F-----GATNNSLFGQTATQAPAX 48
FGS +FG AS++ FGQ+SFG+ PAF SSPG F G ++ FGQ A+ PA
Sbjct: 1699 FGSPAFG-ASSTGVFGQTSFGQAPAFGQSTSSPGSVFSFSQPGFSSVPAFGQAASSTPAS 1757
Query: 49 XXXXXXXXXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGASNT-TFGQS 106
+T+S++S FG Q + NT GGLFG SN FGQS
Sbjct: 1758 SSGNVFGASS-------------STSSSSSFSFG---QSSANTGGGLFGQSNLPAFGQS 1800
>SGD|S000003351 [details] [associations]
symbol:NUP57 "FG-nucleoporin component of central core of the
nuclear pore complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005643 "nuclear pore" evidence=IEA;IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IGI]
[GO:0044613 "nuclear pore central transport channel" evidence=IDA]
[GO:0017056 "structural constituent of nuclear pore"
evidence=IDA;IPI] [GO:0005487 "nucleocytoplasmic transporter
activity" evidence=IGI;IPI] [GO:0036228 "protein targeting to
nuclear inner membrane" evidence=IGI] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006999
"nuclear pore organization" evidence=IMP] [GO:0016021 "integral to
membrane" evidence=ISM] [GO:0006606 "protein import into nucleus"
evidence=IMP] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR024864 SGD:S000003351 EMBL:BK006941 GO:GO:0031965
GO:GO:0051028 EMBL:X83099 GO:GO:0006607 TCDB:9.A.14.1.1 EMBL:Z72905
GO:GO:0036228 GO:GO:0006999 GO:GO:0017056 GO:GO:0044613
GO:GO:0005487 GeneTree:ENSGT00700000104281 InterPro:IPR025574
Pfam:PF13634 OrthoDB:EOG4ZCXDS InterPro:IPR025712 PANTHER:PTHR13000
Pfam:PF13874 HOGENOM:HOG000246824 EMBL:X81155 EMBL:AY723815
EMBL:Z72904 PIR:S51799 RefSeq:NP_011634.1 ProteinModelPortal:P48837
SMR:P48837 DIP:DIP-866N IntAct:P48837 MINT:MINT-398135
STRING:P48837 PaxDb:P48837 EnsemblFungi:YGR119C GeneID:853016
KEGG:sce:YGR119C CYGD:YGR119c eggNOG:NOG293225 OMA:PAINDQL
NextBio:972881 Genevestigator:P48837 GermOnline:YGR119C
Uniprot:P48837
Length = 541
Score = 110 (43.8 bits), Expect = 0.00076, P = 0.00076
Identities = 39/116 (33%), Positives = 50/116 (43%)
Query: 1 MFGSSFGQASTSSAFGQSSFG-KPAFSSPG-FG--ATNNS-----LFGQTATQAPAXXXX 51
+FG Q S+ G FG KP ++ G FG A NNS LFG +
Sbjct: 104 LFGQQTAQPQQST-IGGGLFGNKPTTTTGGLFGNSAQNNSTTSGGLFGNKVGSTGSLMGG 162
Query: 52 XXXXXXXXXXXXXXXXXXPQATTSATSGLFGNQQQPATNTTGGLFGA---SNTTFG 104
PQ TT+ T GLFG++ Q +T T GGLFG+ +N T G
Sbjct: 163 NSTQNTSNMNAGGLFGAKPQNTTATTGGLFGSKPQGST-TNGGLFGSGTQNNNTLG 217
>ASPGD|ASPL0000030982 [details] [associations]
symbol:nup2 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IDA] [GO:0046907 "intracellular transport"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000156 Pfam:PF00638 PROSITE:PS50196 SMART:SM00160
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 EMBL:BN001305
eggNOG:NOG12793 GO:GO:0046907 EMBL:AACD01000094 OrthoDB:EOG4ZSDCT
RefSeq:XP_663089.1 ProteinModelPortal:Q5B1U5 STRING:Q5B1U5
EnsemblFungi:CADANIAT00003603 GeneID:2871776 KEGG:ani:AN5485.2
HOGENOM:HOG000216662 OMA:TWKPNTP Uniprot:Q5B1U5
Length = 1383
Score = 114 (45.2 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 54/248 (21%), Positives = 81/248 (32%)
Query: 3 GSSFGQASTSSAFGQSSFGKPAFSS---PGFGATNNSLFGQTATQAPAXXXXXXXXXXXX 59
G FG ++ + QS P+ S GA+++++F + P
Sbjct: 180 GGLFGSSANNGPSAQSGIATPSNGSIFGQSTGASSSNIFAPSEADKPNPFAQNTAFGGDS 239
Query: 60 XXXXXXXXXXPQATT--SATSGLFGNQQQPATNTTGGLFGASNTTFGQSKPAXXXXXXXX 117
Q + S+ SG F ++ G LFG ++ Q+ P+
Sbjct: 240 MQTSPDAKSSSQKPSLFSSGSGGFSVSTNFGSSGAGSLFGGQSSASSQT-PSKPLFGAKP 298
Query: 118 XXXXXXXXXXMFGQTNQAQPXXXXXXXXXXXXXXXXXXXXXXIKFSPVTGTDTMMRGGSS 177
+FG ++ AQP FS T T G +
Sbjct: 299 TEQTTSASPSLFGASSSAQPASSTPAASSFSSAPLTTGNTSSSLFS--TSTPKPATTGQN 356
Query: 178 QTINTRHVCITCMKEYENKSLEELRYEDYKANRKGPQQGTQATGSFFGTTPQPSMFGTNT 237
T + K EE E KAN+ TQ + SF TT S+F +N
Sbjct: 357 LFQPTTSLFGASTSSTAQKPSEEKAQEGTKANQS---TSTQPSFSFSSTTTGASLFSSNA 413
Query: 238 STAQPATS 245
S A PA S
Sbjct: 414 SGA-PAQS 420
Score = 39 (18.8 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 230 PSMFGTNTSTAQPATS 245
P++FG ++ AQP S
Sbjct: 1193 PTLFGAPSAGAQPGPS 1208
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.124 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 252 190 0.00091 110 3 11 23 0.38 33
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 549 (58 KB)
Total size of DFA: 129 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 15.10u 0.07s 15.17t Elapsed: 00:00:20
Total cpu time: 15.11u 0.07s 15.18t Elapsed: 00:00:24
Start: Thu Aug 15 14:28:43 2013 End: Thu Aug 15 14:29:07 2013