BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17511
(466 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P61291|PSME3_PIG Proteasome activator complex subunit 3 OS=Sus scrofa GN=PSME3 PE=2
SV=1
Length = 254
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 161/221 (72%), Gaps = 4/221 (1%)
Query: 245 VKEYVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITL-N 303
V + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+P+P+PI L N
Sbjct: 15 VDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 304 SHS--DGPVTKKAK-RELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 360
SH DGP KK + E + GT V ++ NG + SN++L +I VKP I+ L+E N
Sbjct: 75 SHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCN 134
Query: 361 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 420
+KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK+A
Sbjct: 135 TVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIA 194
Query: 421 KYPHIADYRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
KYPH+ DYR+ V E+DEKEY+SL L++ E+RN+Y+ L ++
Sbjct: 195 KYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMI 235
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 161/231 (69%), Gaps = 5/231 (2%)
Query: 42 VKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPITL 101
+KV + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+PVP+PI L
Sbjct: 13 LKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILL 72
Query: 102 -NSHS--DGPVTKKAK-RELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEH 157
NSH DGP KK + E + GT V ++ NG + SN++L +I VKP I+ L+E
Sbjct: 73 TNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEK 132
Query: 158 SNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISK 217
N +KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK
Sbjct: 133 CNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSK 192
Query: 218 VAKYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGFPEKI 268
+AKYPH+ DYR+ V E+DEKEY+SL L+ + ++ILK EKI
Sbjct: 193 IAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNI-EKI 242
>sp|P61290|PSME3_MOUSE Proteasome activator complex subunit 3 OS=Mus musculus GN=Psme3
PE=1 SV=1
Length = 254
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 161/221 (72%), Gaps = 4/221 (1%)
Query: 245 VKEYVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITL-N 303
V + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+P+P+PI L N
Sbjct: 15 VDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 304 SHS--DGPVTKKAK-RELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 360
SH DGP KK + E + GT V ++ NG + SN++L +I VKP I+ L+E N
Sbjct: 75 SHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCN 134
Query: 361 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 420
+KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK+A
Sbjct: 135 TVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIA 194
Query: 421 KYPHIADYRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
KYPH+ DYR+ V E+DEKEY+SL L++ E+RN+Y+ L ++
Sbjct: 195 KYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMI 235
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 161/231 (69%), Gaps = 5/231 (2%)
Query: 42 VKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPITL 101
+KV + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+PVP+PI L
Sbjct: 13 LKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILL 72
Query: 102 -NSHS--DGPVTKKAK-RELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEH 157
NSH DGP KK + E + GT V ++ NG + SN++L +I VKP I+ L+E
Sbjct: 73 TNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEK 132
Query: 158 SNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISK 217
N +KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK
Sbjct: 133 CNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSK 192
Query: 218 VAKYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGFPEKI 268
+AKYPH+ DYR+ V E+DEKEY+SL L+ + ++ILK EKI
Sbjct: 193 IAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNI-EKI 242
>sp|Q4R4V3|PSME3_MACFA Proteasome activator complex subunit 3 OS=Macaca fascicularis
GN=PSME3 PE=2 SV=1
Length = 254
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 161/221 (72%), Gaps = 4/221 (1%)
Query: 245 VKEYVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITL-N 303
V + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+P+P+PI L N
Sbjct: 15 VDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 304 SHS--DGPVTKKAK-RELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 360
SH DGP KK + E + GT V ++ NG + SN++L +I VKP I+ L+E N
Sbjct: 75 SHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCN 134
Query: 361 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 420
+KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK+A
Sbjct: 135 TVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIA 194
Query: 421 KYPHIADYRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
KYPH+ DYR+ V E+DEKEY+SL L++ E+RN+Y+ L ++
Sbjct: 195 KYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMI 235
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 161/231 (69%), Gaps = 5/231 (2%)
Query: 42 VKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPITL 101
+KV + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+PVP+PI L
Sbjct: 13 LKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILL 72
Query: 102 -NSHS--DGPVTKKAK-RELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEH 157
NSH DGP KK + E + GT V ++ NG + SN++L +I VKP I+ L+E
Sbjct: 73 TNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEK 132
Query: 158 SNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISK 217
N +KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK
Sbjct: 133 CNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSK 192
Query: 218 VAKYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGFPEKI 268
+AKYPH+ DYR+ V E+DEKEY+SL L+ + ++ILK EKI
Sbjct: 193 IAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNI-EKI 242
>sp|P61289|PSME3_HUMAN Proteasome activator complex subunit 3 OS=Homo sapiens GN=PSME3
PE=1 SV=1
Length = 254
Score = 224 bits (571), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 161/221 (72%), Gaps = 4/221 (1%)
Query: 245 VKEYVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITL-N 303
V + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+P+P+PI L N
Sbjct: 15 VDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 304 SHS--DGPVTKKAK-RELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 360
SH DGP KK + E + GT V ++ NG + SN++L +I VKP I+ L+E N
Sbjct: 75 SHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCN 134
Query: 361 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 420
+KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK+A
Sbjct: 135 TVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIA 194
Query: 421 KYPHIADYRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
KYPH+ DYR+ V E+DEKEY+SL L++ E+RN+Y+ L ++
Sbjct: 195 KYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMI 235
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 161/231 (69%), Gaps = 5/231 (2%)
Query: 42 VKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPITL 101
+KV + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+PVP+PI L
Sbjct: 13 LKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILL 72
Query: 102 -NSHS--DGPVTKKAK-RELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEH 157
NSH DGP KK + E + GT V ++ NG + SN++L +I VKP I+ L+E
Sbjct: 73 TNSHDGLDGPTYKKRRLDECEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEK 132
Query: 158 SNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISK 217
N +KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK
Sbjct: 133 CNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSK 192
Query: 218 VAKYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGFPEKI 268
+AKYPH+ DYR+ V E+DEKEY+SL L+ + ++ILK EKI
Sbjct: 193 IAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNI-EKI 242
>sp|Q5RFD3|PSME3_PONAB Proteasome activator complex subunit 3 OS=Pongo abelii GN=PSME3
PE=2 SV=1
Length = 254
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/223 (47%), Positives = 162/223 (72%), Gaps = 8/223 (3%)
Query: 245 VKEYVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITL-N 303
V + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+P+P+PI L N
Sbjct: 15 VDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 304 SHS--DGPVTKKAKRELDN---DVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEH 358
SH DGP KK R LD+ GT V ++ NG + SN++L +I VKP I+ L+E
Sbjct: 75 SHDGLDGPTYKK--RRLDDCEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEK 132
Query: 359 SNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISK 418
N +KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK
Sbjct: 133 CNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSK 192
Query: 419 VAKYPHIADYRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
+AKYPH+ DYR+ V E+DEKEY+SL L++ E+RN+Y+ L ++
Sbjct: 193 IAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMI 235
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 162/233 (69%), Gaps = 9/233 (3%)
Query: 42 VKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPITL 101
+KV + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+PVP+PI L
Sbjct: 13 LKVDSFRERITSEAEDLVANFFPKKLLELDSFLKEPILNIHDLTQIHSDMNLPVPDPILL 72
Query: 102 -NSHS--DGPVTKKAKRELDN---DVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLV 155
NSH DGP KK R LD+ GT V ++ NG + SN++L +I VKP I+ L+
Sbjct: 73 TNSHDGLDGPTYKK--RRLDDCEEAFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLI 130
Query: 156 EHSNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVI 215
E N +KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++
Sbjct: 131 EKCNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLV 190
Query: 216 SKVAKYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGFPEKI 268
SK+AKYPH+ DYR+ V E+DEKEY+SL L+ + ++ILK EKI
Sbjct: 191 SKIAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNI-EKI 242
>sp|Q5F3J5|PSME3_CHICK Proteasome activator complex subunit 3 OS=Gallus gallus GN=PSME3
PE=1 SV=1
Length = 254
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 161/221 (72%), Gaps = 4/221 (1%)
Query: 245 VKEYVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITL-N 303
V + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+P+P+PI L N
Sbjct: 15 VDSFRERITSEAEDLVANFFPKKLLELDGFLKEPILNIHDLTQIHSDMNLPVPDPILLTN 74
Query: 304 SHS--DGPVTKKAKRE-LDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 360
SH DGP KK K E + GT V ++ NG + SN++L +I VKP I+ L+E N
Sbjct: 75 SHDGLDGPNMKKRKLEDREETFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCN 134
Query: 361 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 420
+KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK+A
Sbjct: 135 TVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSKIA 194
Query: 421 KYPHIADYRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
KYPH+ DYR+ V E+DEKEY+SL L++ E+RN+Y+ L ++
Sbjct: 195 KYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMI 235
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 161/231 (69%), Gaps = 5/231 (2%)
Query: 42 VKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPITL 101
+KV + + + S+AE+L+ FP+K++ L+ L + D+T+IH D+N+PVP+PI L
Sbjct: 13 LKVDSFRERITSEAEDLVANFFPKKLLELDGFLKEPILNIHDLTQIHSDMNLPVPDPILL 72
Query: 102 -NSHS--DGPVTKKAKRE-LDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEH 157
NSH DGP KK K E + GT V ++ NG + SN++L +I VKP I+ L+E
Sbjct: 73 TNSHDGLDGPNMKKRKLEDREETFQGTKVFVMPNGMLKSNQQLVDIIEKVKPEIRLLIEK 132
Query: 158 SNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISK 217
N +KMW+ +IP+IEDGNNFGVSIQE+ +AE+++VESEAA++ DQ+SRY+++RAK++SK
Sbjct: 133 CNTVKMWVQLLIPRIEDGNNFGVSIQEETVAELRTVESEAASYLDQISRYYITRAKLVSK 192
Query: 218 VAKYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGFPEKI 268
+AKYPH+ DYR+ V E+DEKEY+SL L+ + ++ILK EKI
Sbjct: 193 IAKYPHVEDYRRTVTEIDEKEYISLRLIISELRNQYVTLHDMILKNI-EKI 242
>sp|P58238|PSME1_MACFA Proteasome activator complex subunit 1 OS=Macaca fascicularis
GN=PSME1 PE=2 SV=1
Length = 249
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 120/214 (56%)
Query: 248 YVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSD 307
+ + + ++ E L+ FP+KI L+ L +++ + ++IP+P+P+ +
Sbjct: 17 FREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKEKGE 76
Query: 308 GPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWIT 367
++ + + + GPV NEK+ +++ +KP IK ++E N++ W+
Sbjct: 77 RKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKILVLLQRLKPEIKDVIEQLNLVTTWLQ 136
Query: 368 FMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIAD 427
IP+IEDGNNFGV++QE + + S+ ++ F+ Q+S+YF R ++K AK PH+ D
Sbjct: 137 LQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGD 196
Query: 428 YRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
YRQ V ELDE EY + L++ EIRN Y L I+
Sbjct: 197 YRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDII 230
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 123/225 (54%)
Query: 40 AHVKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPI 99
A KV + +++ ++ E L+ FP+KI L+ L +++ + ++IPVP+P+
Sbjct: 10 AQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPV 69
Query: 100 TLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 159
+ ++ + + + GPV NEK+ +++ +KP IK ++E N
Sbjct: 70 KEKEKGERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKILVLLQRLKPEIKDVIEQLN 129
Query: 160 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 219
++ W+ IP+IEDGNNFGV++QE + + S+ ++ F+ Q+S+YF R ++K A
Sbjct: 130 LVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAA 189
Query: 220 KYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGF 264
K PH+ DYRQ V ELDE EY + L+ + + ++ILK F
Sbjct: 190 KQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNF 234
>sp|Q4U5R3|PSME1_BOVIN Proteasome activator complex subunit 1 OS=Bos taurus GN=PSME1 PE=1
SV=1
Length = 249
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 117/208 (56%)
Query: 254 SQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSDGPVTKK 313
++ E L+ FP+KI L+ L +++ + ++IP+P+P+ + ++
Sbjct: 23 TKTENLLGSYFPKKISELDAFLKEPDLNEANLSNLKAPLDIPVPDPVKEKEKEERRKQQE 82
Query: 314 AKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWITFMIPKI 373
+ + + GPV NEK+ +++ VKP IK ++E N++ W+ IP+I
Sbjct: 83 KEDKDEKKKGEDEDKGPPCGPVGCNEKIVVLLQRVKPEIKDVIEKLNLVTTWLQLQIPRI 142
Query: 374 EDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIADYRQAVK 433
EDGNNFGV++QE + + ++ ++ F+ Q+S+YF R ++K AK PH+ DYRQ V
Sbjct: 143 EDGNNFGVAVQEKVFELMTALHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVH 202
Query: 434 ELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
ELDE EY + L++ EIRN Y L I+
Sbjct: 203 ELDEAEYRDIRLMVMEIRNAYAVLYDII 230
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 123/225 (54%)
Query: 40 AHVKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPI 99
A KV + +++ ++ E L+ FP+KI L+ L +++ + ++IPVP+P+
Sbjct: 10 AQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPDLNEANLSNLKAPLDIPVPDPV 69
Query: 100 TLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 159
+ ++ + + + GPV NEK+ +++ VKP IK ++E N
Sbjct: 70 KEKEKEERRKQQEKEDKDEKKKGEDEDKGPPCGPVGCNEKIVVLLQRVKPEIKDVIEKLN 129
Query: 160 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 219
++ W+ IP+IEDGNNFGV++QE + + ++ ++ F+ Q+S+YF R ++K A
Sbjct: 130 LVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTALHTKLEGFHTQISKYFSERGDAVTKAA 189
Query: 220 KYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGF 264
K PH+ DYRQ V ELDE EY + L+ + + ++ILK F
Sbjct: 190 KQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNF 234
>sp|Q06323|PSME1_HUMAN Proteasome activator complex subunit 1 OS=Homo sapiens GN=PSME1
PE=1 SV=1
Length = 249
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 120/214 (56%)
Query: 248 YVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSD 307
+ + + ++ E L+ FP+KI L+ L +++ + ++IP+P+P+ +
Sbjct: 17 FREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKEKEE 76
Query: 308 GPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWIT 367
++ + + + GPV NEK+ +++ +KP IK ++E N++ W+
Sbjct: 77 RKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQ 136
Query: 368 FMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIAD 427
IP+IEDGNNFGV++QE + + S+ ++ F+ Q+S+YF R ++K AK PH+ D
Sbjct: 137 LQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGD 196
Query: 428 YRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
YRQ V ELDE EY + L++ EIRN Y L I+
Sbjct: 197 YRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDII 230
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 123/225 (54%)
Query: 40 AHVKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPI 99
A KV + +++ ++ E L+ FP+KI L+ L +++ + ++IPVP+P+
Sbjct: 10 AQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPV 69
Query: 100 TLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 159
+ ++ + + + GPV NEK+ +++ +KP IK ++E N
Sbjct: 70 KEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPEIKDVIEQLN 129
Query: 160 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 219
++ W+ IP+IEDGNNFGV++QE + + S+ ++ F+ Q+S+YF R ++K A
Sbjct: 130 LVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTSLHTKLEGFHTQISKYFSERGDAVTKAA 189
Query: 220 KYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGF 264
K PH+ DYRQ V ELDE EY + L+ + + ++ILK F
Sbjct: 190 KQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNF 234
>sp|P97371|PSME1_MOUSE Proteasome activator complex subunit 1 OS=Mus musculus GN=Psme1
PE=2 SV=2
Length = 249
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 119/214 (55%)
Query: 248 YVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSD 307
+ + + S+ E L+ FP+KI L+ L +++ + ++IP+P+P+ +
Sbjct: 17 FREDLCSKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKEKEE 76
Query: 308 GPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWIT 367
++ + + + GPV NEK+ +++ +KP IK + E N++ W+
Sbjct: 77 RKKQQEKEEKEEKKKGDEDDKGPPCGPVNCNEKIVVLLQRLKPEIKDVTEQLNLVTTWLQ 136
Query: 368 FMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIAD 427
IP+IEDGNNFGV++QE + + ++ ++ F+ Q+S+YF R ++K AK PH+ D
Sbjct: 137 LQIPRIEDGNNFGVAVQEKVFELMTNLHTKLEGFHTQISKYFSERGDAVAKAAKQPHVGD 196
Query: 428 YRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
YRQ V ELDE EY + L++ EIRN Y L I+
Sbjct: 197 YRQLVHELDEAEYQEIRLMVMEIRNAYAVLYDII 230
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 122/225 (54%)
Query: 40 AHVKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPI 99
A KV + +++ S+ E L+ FP+KI L+ L +++ + ++IPVP+P+
Sbjct: 10 AQAKVDVFREDLCSKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPV 69
Query: 100 TLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 159
+ ++ + + + GPV NEK+ +++ +KP IK + E N
Sbjct: 70 KEKEKEERKKQQEKEEKEEKKKGDEDDKGPPCGPVNCNEKIVVLLQRLKPEIKDVTEQLN 129
Query: 160 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 219
++ W+ IP+IEDGNNFGV++QE + + ++ ++ F+ Q+S+YF R ++K A
Sbjct: 130 LVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTNLHTKLEGFHTQISKYFSERGDAVAKAA 189
Query: 220 KYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGF 264
K PH+ DYRQ V ELDE EY + L+ + + ++ILK F
Sbjct: 190 KQPHVGDYRQLVHELDEAEYQEIRLMVMEIRNAYAVLYDIILKNF 234
>sp|Q64L94|PSME1_PIG Proteasome activator complex subunit 1 OS=Sus scrofa GN=PSME1 PE=2
SV=1
Length = 249
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 120/214 (56%)
Query: 248 YVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSD 307
+ + + ++ E L+ FP+KI L+ L +++ + ++IP+P+P+ +
Sbjct: 17 FREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKEKEE 76
Query: 308 GPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWIT 367
++ + + + GPV NEK+ +++ +KP IK ++E N++ W+
Sbjct: 77 RKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQ 136
Query: 368 FMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIAD 427
IP+IEDGNNFGV++QE + + ++ ++ F+ Q+S+YF R ++K AK PH+ D
Sbjct: 137 LQIPRIEDGNNFGVAVQEKVFELMTALHTKLEGFHTQISKYFSERGDAVAKAAKQPHVGD 196
Query: 428 YRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
YRQ V ELDE EY + L++ EIRN Y L I+
Sbjct: 197 YRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDII 230
Score = 132 bits (333), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 123/225 (54%)
Query: 40 AHVKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPI 99
A KV + +++ ++ E L+ FP+KI L+ L +++ + ++IPVP+P+
Sbjct: 10 AQAKVDVFREDLCTKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPV 69
Query: 100 TLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 159
+ ++ + + + GPV NEK+ +++ +KP IK ++E N
Sbjct: 70 KEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCGPVNCNEKIVVLLQRLKPEIKDVIEQLN 129
Query: 160 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 219
++ W+ IP+IEDGNNFGV++QE + + ++ ++ F+ Q+S+YF R ++K A
Sbjct: 130 LVTTWLQLQIPRIEDGNNFGVAVQEKVFELMTALHTKLEGFHTQISKYFSERGDAVAKAA 189
Query: 220 KYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGF 264
K PH+ DYRQ V ELDE EY + L+ + + ++ILK F
Sbjct: 190 KQPHVGDYRQLVHELDEAEYRDIRLMVMEIRNAYAVLYDIILKNF 234
>sp|Q63797|PSME1_RAT Proteasome activator complex subunit 1 OS=Rattus norvegicus
GN=Psme1 PE=2 SV=1
Length = 249
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 118/214 (55%)
Query: 248 YVDTVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSD 307
+ + + S+ E L+ FP+KI L+ L +++ + ++IP+P+P+ +
Sbjct: 17 FREDLCSKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVKEKEKEE 76
Query: 308 GPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWIT 367
++ + + + GPV NEK+ +++ +KP IK ++E N++ W+
Sbjct: 77 RKKQQEKEEKDEKKKGDEDDKGPPCGPVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQ 136
Query: 368 FMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIAD 427
IP+IEDGNNFGV++Q + + S+ ++ F Q+S+YF R ++K AK PH+ D
Sbjct: 137 LQIPRIEDGNNFGVAVQAKVFELMTSLHTKLEGFQTQISKYFSERGDAVAKAAKQPHVGD 196
Query: 428 YRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
YRQ V ELDE EY + L++ EIRN Y L I+
Sbjct: 197 YRQLVHELDEAEYQEIRLMVMEIRNAYAVLYDII 230
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 121/225 (53%)
Query: 40 AHVKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPVPEPI 99
A KV + +++ S+ E L+ FP+KI L+ L +++ + ++IPVP+P+
Sbjct: 10 AQAKVDVFREDLCSKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPV 69
Query: 100 TLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSN 159
+ ++ + + + GPV NEK+ +++ +KP IK ++E N
Sbjct: 70 KEKEKEERKKQQEKEEKDEKKKGDEDDKGPPCGPVNCNEKIVVLLQRLKPEIKDVIEQLN 129
Query: 160 VLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVA 219
++ W+ IP+IEDGNNFGV++Q + + S+ ++ F Q+S+YF R ++K A
Sbjct: 130 LVTTWLQLQIPRIEDGNNFGVAVQAKVFELMTSLHTKLEGFQTQISKYFSERGDAVAKAA 189
Query: 220 KYPHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAEELILKGF 264
K PH+ DYRQ V ELDE EY + L+ + + ++ILK F
Sbjct: 190 KQPHVGDYRQLVHELDEAEYQEIRLMVMEIRNAYAVLYDIILKNF 234
>sp|Q9UL46|PSME2_HUMAN Proteasome activator complex subunit 2 OS=Homo sapiens GN=PSME2
PE=1 SV=4
Length = 239
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 119/213 (55%), Gaps = 14/213 (6%)
Query: 31 QPPSIMANG-AHVKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQ 89
+P + +G A +V+ + N+ +AEE + + P+KI+ LN LL + V D+T +
Sbjct: 3 KPCGVRLSGEARKQVEVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRA 62
Query: 90 DINIPVPEPITLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKP 149
++IP+P+P + + K+ K+E+ G +P NEK+ ++++VKP
Sbjct: 63 PLDIPIPDPPPKDDEME--TDKQEKKEVHK-----------CGFLPGNEKVLSLLALVKP 109
Query: 150 HIKQLVEHSNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFV 209
+ L E ++ WI +IPKIEDGN+FGV+IQE +L + +V+++ AF +S+YF
Sbjct: 110 EVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFS 169
Query: 210 SRAKVISKVAKYPHIADYRQAVKELDEKEYLSL 242
R ++K +K H+ DYR V E DE Y L
Sbjct: 170 ERGDAVAKASKETHVMDYRALVHERDEAAYGEL 202
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 13/207 (6%)
Query: 255 QAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSDGPVTKKA 314
+AEE + + P+KI+ LN LL + V D+T + ++IPIP+P + + K+
Sbjct: 27 EAEEFLYRFLPQKIIYLNQLLQEDSLNVADLTSLRAPLDIPIPDPPPKDDEME--TDKQE 84
Query: 315 KRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWITFMIPKIE 374
K+E+ G +P NEK+ ++++VKP + L E ++ WI +IPKIE
Sbjct: 85 KKEVHK-----------CGFLPGNEKVLSLLALVKPEVWTLKEKCILVITWIQHLIPKIE 133
Query: 375 DGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIADYRQAVKE 434
DGN+FGV+IQE +L + +V+++ AF +S+YF R ++K +K H+ DYR V E
Sbjct: 134 DGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHE 193
Query: 435 LDEKEYLSLWLVLCEIRNRYLCLKTIV 461
DE Y L ++ ++R Y L I+
Sbjct: 194 RDEAAYGELRAMVLDLRAFYAELYHII 220
>sp|Q5E9G3|PSME2_BOVIN Proteasome activator complex subunit 2 OS=Bos taurus GN=PSME2 PE=1
SV=3
Length = 239
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 13/207 (6%)
Query: 255 QAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSDGPVTKKA 314
+AEE + + P+KI+ LN LL + F V D+ + ++IPIP+P + + K+
Sbjct: 27 EAEEFLYRFLPQKIIYLNQLLQEDSFNVTDLNSLRAPLDIPIPDPPPKDDEME--TDKQE 84
Query: 315 KRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWITFMIPKIE 374
K+E+ G +P NEK+ ++++VKP + L E ++ WI +IPKIE
Sbjct: 85 KKEVPK-----------CGFLPGNEKVLALLALVKPEVWTLKEKCILVITWIQHLIPKIE 133
Query: 375 DGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIADYRQAVKE 434
DGN+FGV+IQE +L + +V+++ AF +S+YF R ++K +K H+ DYR V E
Sbjct: 134 DGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHE 193
Query: 435 LDEKEYLSLWLVLCEIRNRYLCLKTIV 461
DE Y L ++ ++R Y L I+
Sbjct: 194 RDEAVYGDLRAMVLDLRAFYAELYHII 220
Score = 112 bits (280), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 118/213 (55%), Gaps = 14/213 (6%)
Query: 31 QPPSIMANGAHVK-VKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQ 89
+P + +G +K V + N+ +AEE + + P+KI+ LN LL + F V D+ +
Sbjct: 3 KPCGVRLSGEALKQVDVFRQNLFQEAEEFLYRFLPQKIIYLNQLLQEDSFNVTDLNSLRA 62
Query: 90 DINIPVPEPITLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKP 149
++IP+P+P + + K+ K+E+ G +P NEK+ ++++VKP
Sbjct: 63 PLDIPIPDPPPKDDEME--TDKQEKKEVPK-----------CGFLPGNEKVLALLALVKP 109
Query: 150 HIKQLVEHSNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFV 209
+ L E ++ WI +IPKIEDGN+FGV+IQE +L + +V+++ AF +S+YF
Sbjct: 110 EVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFS 169
Query: 210 SRAKVISKVAKYPHIADYRQAVKELDEKEYLSL 242
R ++K +K H+ DYR V E DE Y L
Sbjct: 170 ERGDAVAKASKETHVMDYRALVHERDEAVYGDL 202
>sp|Q863Z0|PSME2_PIG Proteasome activator complex subunit 2 OS=Sus scrofa GN=PSME2 PE=2
SV=3
Length = 239
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 13/207 (6%)
Query: 255 QAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSDGPVTKKA 314
+AEE + + P+KI+ L+ LL + V D+T + ++IPIP+P + + K+
Sbjct: 27 EAEEFLYRFLPQKIIYLSQLLQEDSLNVTDLTSLRAPLDIPIPDPPPKDDEME--TDKQE 84
Query: 315 KRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWITFMIPKIE 374
K+E+ G +P NEK+ ++ +VKP + L E ++ WI +IPKIE
Sbjct: 85 KKEVPK-----------CGFLPGNEKILALLGLVKPEVWTLKEKCILVITWIQHLIPKIE 133
Query: 375 DGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIADYRQAVKE 434
DGN+FGV++QE +L + +V+++ AF +S+YF R ++K +K H+ DYR V E
Sbjct: 134 DGNDFGVAVQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASKETHVMDYRALVHE 193
Query: 435 LDEKEYLSLWLVLCEIRNRYLCLKTIV 461
DE + L ++ ++R Y L I+
Sbjct: 194 RDEAAHGELRAMVLDLRAFYAELYHII 220
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 117/213 (54%), Gaps = 14/213 (6%)
Query: 31 QPPSIMANG-AHVKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQ 89
+P + +G A +V + N+ +AEE + + P+KI+ L+ LL + V D+T +
Sbjct: 3 KPCGVRLSGEARKQVDVFRQNLFQEAEEFLYRFLPQKIIYLSQLLQEDSLNVTDLTSLRA 62
Query: 90 DINIPVPEPITLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKP 149
++IP+P+P + + K+ K+E+ G +P NEK+ ++ +VKP
Sbjct: 63 PLDIPIPDPPPKDDEME--TDKQEKKEVPK-----------CGFLPGNEKILALLGLVKP 109
Query: 150 HIKQLVEHSNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFV 209
+ L E ++ WI +IPKIEDGN+FGV++QE +L + +V+++ AF +S+YF
Sbjct: 110 EVWTLKEKCILVITWIQHLIPKIEDGNDFGVAVQEKVLERVNAVKTKVEAFQTTISKYFS 169
Query: 210 SRAKVISKVAKYPHIADYRQAVKELDEKEYLSL 242
R ++K +K H+ DYR V E DE + L
Sbjct: 170 ERGDAVAKASKETHVMDYRALVHERDEAAHGEL 202
>sp|Q63798|PSME2_RAT Proteasome activator complex subunit 2 OS=Rattus norvegicus
GN=Psme2 PE=2 SV=3
Length = 238
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 118/213 (55%), Gaps = 15/213 (7%)
Query: 31 QPPSIMANG-AHVKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQ 89
+P + +G A +V + N+ +AE+ + P KI+ L+ LL + V D++ +
Sbjct: 3 KPCGVRLSGEARKQVDAFRQNLFQEAEDFLCTFLPRKIISLSQLLQEDSLNVADLSSLRA 62
Query: 90 DINIPVPEPITLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKP 149
++IP+P+P + + T++ K+E+ G +P NEKL ++++VKP
Sbjct: 63 PLDIPIPDPPPKDDEME---TEQEKKEVPK-----------CGFLPGNEKLLALLALVKP 108
Query: 150 HIKQLVEHSNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFV 209
+ L E ++ WI +IPKIEDGN+FGV+IQE +L + +V+++ AF +S+YF
Sbjct: 109 EVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTAISKYFS 168
Query: 210 SRAKVISKVAKYPHIADYRQAVKELDEKEYLSL 242
R ++K +K H+ DYR V E DE Y +L
Sbjct: 169 ERGDAVAKASKDTHVMDYRALVHERDEAAYGAL 201
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 116/207 (56%), Gaps = 14/207 (6%)
Query: 255 QAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSDGPVTKKA 314
+AE+ + P KI+ L+ LL + V D++ + ++IPIP+P + + T++
Sbjct: 27 EAEDFLCTFLPRKIISLSQLLQEDSLNVADLSSLRAPLDIPIPDPPPKDDEME---TEQE 83
Query: 315 KRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWITFMIPKIE 374
K+E+ G +P NEKL ++++VKP + L E ++ WI +IPKIE
Sbjct: 84 KKEVPK-----------CGFLPGNEKLLALLALVKPEVWTLKEKCILVITWIQHLIPKIE 132
Query: 375 DGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIADYRQAVKE 434
DGN+FGV+IQE +L + +V+++ AF +S+YF R ++K +K H+ DYR V E
Sbjct: 133 DGNDFGVAIQEKVLERVNAVKTKVEAFQTAISKYFSERGDAVAKASKDTHVMDYRALVHE 192
Query: 435 LDEKEYLSLWLVLCEIRNRYLCLKTIV 461
DE Y +L ++ ++R Y L I+
Sbjct: 193 RDEAAYGALRAMVLDLRAFYAELHHII 219
>sp|P97372|PSME2_MOUSE Proteasome activator complex subunit 2 OS=Mus musculus GN=Psme2
PE=2 SV=4
Length = 239
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 115/207 (55%), Gaps = 13/207 (6%)
Query: 255 QAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSDGPVTKKA 314
+A++ + P KI+ L+ LL + V D++ + ++IPIP+P + + K+
Sbjct: 27 EADDFLCTFLPRKIISLSQLLQEDSLNVADLSSLRAPLDIPIPDPPPKDDEME--TDKQE 84
Query: 315 KRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKPHIKQLVEHSNVLKMWITFMIPKIE 374
K+E+ G +P NEKL ++++VKP + L E ++ WI +IPKIE
Sbjct: 85 KKEVPK-----------CGYLPGNEKLLALLALVKPEVWTLKEKCILVITWIQHLIPKIE 133
Query: 375 DGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHIADYRQAVKE 434
DGN+FGV+IQE +L + +V+++ AF +S+YF R ++K +K H+ DYR V E
Sbjct: 134 DGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFSERGDAVAKASKDTHVMDYRALVHE 193
Query: 435 LDEKEYLSLWLVLCEIRNRYLCLKTIV 461
DE Y +L ++ ++R Y L I+
Sbjct: 194 RDEAAYGALRAMVLDLRAFYAELYHII 220
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 117/213 (54%), Gaps = 14/213 (6%)
Query: 31 QPPSIMANG-AHVKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVTKIHQ 89
+P + +G A +V + N+ +A++ + P KI+ L+ LL + V D++ +
Sbjct: 3 KPCGVRLSGEARKQVDVFRQNLFQEADDFLCTFLPRKIISLSQLLQEDSLNVADLSSLRA 62
Query: 90 DINIPVPEPITLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSNEKLKLMISVVKP 149
++IP+P+P + + K+ K+E+ G +P NEKL ++++VKP
Sbjct: 63 PLDIPIPDPPPKDDEME--TDKQEKKEVPK-----------CGYLPGNEKLLALLALVKP 109
Query: 150 HIKQLVEHSNVLKMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFV 209
+ L E ++ WI +IPKIEDGN+FGV+IQE +L + +V+++ AF +S+YF
Sbjct: 110 EVWTLKEKCILVITWIQHLIPKIEDGNDFGVAIQEKVLERVNAVKTKVEAFQTTISKYFS 169
Query: 210 SRAKVISKVAKYPHIADYRQAVKELDEKEYLSL 242
R ++K +K H+ DYR V E DE Y +L
Sbjct: 170 ERGDAVAKASKDTHVMDYRALVHERDEAAYGAL 202
>sp|Q967U1|PSME_DICDI Proteasome activator 28 OS=Dictyostelium discoideum GN=psmE3 PE=1
SV=1
Length = 225
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 91/159 (57%), Gaps = 13/159 (8%)
Query: 307 DGPVTKKAKRELDN-DVSGTPV--LLLTNGPV-PSNEKLKLMISVVKPHIKQLVEHSNVL 362
DG +KK R+LD+ D P+ L+ TN + +++K K K +I +L+E +V+
Sbjct: 57 DGQTSKK--RKLDSEDYVLMPIEDLIKTNRVIMETHQKFK------KAYI-ELIETFSVI 107
Query: 363 KMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKY 422
+ WI+ IP+IEDGNNFGV +QEDI+ +I +E + D YF SRA ++ K+ K+
Sbjct: 108 RGWISLNIPRIEDGNNFGVDVQEDIITQITKLEEVYTSLLDGSESYFASRASLVKKILKH 167
Query: 423 PHIADYRQAVKELDEKEYLSLWLVLCEIRNRYLCLKTIV 461
I YR ++ ++DEKE+ ++ N Y +++
Sbjct: 168 KDIEAYRYSLAQVDEKEFTRFSFSYFDLANNYATTYSLI 206
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 94/167 (56%), Gaps = 17/167 (10%)
Query: 106 DGPVTKKAKRELDN-DVSGTPV--LLLTNGPV-PSNEKLKLMISVVKPHIKQLVEHSNVL 161
DG +KK R+LD+ D P+ L+ TN + +++K K K +I +L+E +V+
Sbjct: 57 DGQTSKK--RKLDSEDYVLMPIEDLIKTNRVIMETHQKFK------KAYI-ELIETFSVI 107
Query: 162 KMWITFMIPKIEDGNNFGVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKY 221
+ WI+ IP+IEDGNNFGV +QEDI+ +I +E + D YF SRA ++ K+ K+
Sbjct: 108 RGWISLNIPRIEDGNNFGVDVQEDIITQITKLEEVYTSLLDGSESYFASRASLVKKILKH 167
Query: 222 PHIADYRQAVKELDEKEYLSLWLVKEYVDTVKSQAE--ELILKGFPE 266
I YR ++ ++DEKE+ Y D + A LI+K F +
Sbjct: 168 KDIEAYRYSLAQVDEKEFTRFSF--SYFDLANNYATTYSLIVKNFAK 212
>sp|P87052|MUG10_SCHPO Meiotically up-regulated gene 10 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug10 PE=1 SV=3
Length = 344
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 179 GVSIQEDILAEIQSVESEAAAFYDQMSRYFVSRAKVISKVAKYPHI-ADYRQAVKELDEK 237
G+S E I+++ S S+ + RY + A+V + KYP + D+R AVK LD+
Sbjct: 138 GISAIEKIISDPSSCNSQLLIPLQHLLRYPIHLARVCKMLRKYPFLNGDFRMAVKTLDDF 197
Query: 238 EYLSLWLVKEYVDTVKSQAE 257
L Y+D K++ E
Sbjct: 198 RELC-----SYIDQEKAREE 212
>sp|B6IXI3|GCSPA_RHOCS Probable glycine dehydrogenase [decarboxylating] subunit 1
OS=Rhodospirillum centenum (strain ATCC 51521 / SW)
GN=gcvPA PE=3 SV=1
Length = 449
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 64/164 (39%), Gaps = 19/164 (11%)
Query: 78 QFQVEDVTKIHQDINIPVPEPITLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSN 137
+ V DV + +D VP+ L + DG + E+D +SG LT G VPS
Sbjct: 17 RIGVPDVDALFRD----VPQAARLTAPIDGLPLHMGELEVDRLLSGMAAKNLTAGSVPSF 72
Query: 138 EKLKLMISVVKPHIKQLVEHSNVLKMWITFMIPKIEDGN-NFGVSIQEDILAEIQSVESE 196
V + Q++ L + + P++ G + Q + AEI +E
Sbjct: 73 LGAGAYRHHVPASVDQMLLRGEFLTSYTPYQ-PEVAQGTLQYLFEFQTQV-AEITGMEVA 130
Query: 197 AAAFYDQ---------MSRYFVSRAKVISKVAKYPHIADYRQAV 231
A+ YD M+ R+K + +PH YR+ V
Sbjct: 131 NASMYDGATGTAEAVLMATRLTRRSKAVLSGGLHPH---YREVV 171
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 19/164 (11%)
Query: 279 QFQVEDVTKIHQDINIPIPEPITLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVPSN 338
+ V DV + +D+ P+ L + DG + E+D +SG LT G VPS
Sbjct: 17 RIGVPDVDALFRDV----PQAARLTAPIDGLPLHMGELEVDRLLSGMAAKNLTAGSVPSF 72
Query: 339 EKLKLMISVVKPHIKQLVEHSNVLKMWITFMIPKIEDGN-NFGVSIQEDILAEIQSVESE 397
V + Q++ L + + P++ G + Q + AEI +E
Sbjct: 73 LGAGAYRHHVPASVDQMLLRGEFLTSYTPYQ-PEVAQGTLQYLFEFQTQV-AEITGMEVA 130
Query: 398 AAAFYDQ---------MSRYFVSRAKVISKVAKYPHIADYRQAV 432
A+ YD M+ R+K + +PH YR+ V
Sbjct: 131 NASMYDGATGTAEAVLMATRLTRRSKAVLSGGLHPH---YREVV 171
>sp|Q6CY29|VTS1_KLULA Protein VTS1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=VTS1 PE=3
SV=1
Length = 459
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 16/167 (9%)
Query: 29 RFQPPSIMANGAH---VKVKEYVDNVKSQAEELILKGFPEKIVILNDLLATEQFQVEDVT 85
R Q P + GAH V + + QA ++ + LNDLL +QF ++
Sbjct: 13 RTQSPVNLPRGAHPGAVLLSPKGSSANLQALGTNPTSPSQQPLFLNDLLNQQQFSLDSQL 72
Query: 86 KIHQDINIPVPEPITLNSHSDGPVTKKAKRELDNDVSGTPVLLLTNGPVP---SNEKLKL 142
+ D+ P L++ + P LD T + + + P+P SN +
Sbjct: 73 HLRDDLGRPSNMVSPLSNSAMNPTASNGSTFLDTFSRPTSSMAINHQPLPLQHSNSNANV 132
Query: 143 MISVVKPHIKQLVEHSNVLKMWITFMIPKIEDG--NNFGVSIQEDIL 187
M++ + QL WI+ + P ++ +N S+ E++L
Sbjct: 133 MVNFTN-DVNQLCN-------WISMLTPSQQNTVMDNLLSSLNEEVL 171
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 13/128 (10%)
Query: 266 EKIVILNDLLATEQFQVEDVTKIHQDINIPIPEPITLNSHSDGPVTKKAKRELDNDVSGT 325
++ + LNDLL +QF ++ + D+ P L++ + P LD T
Sbjct: 52 QQPLFLNDLLNQQQFSLDSQLHLRDDLGRPSNMVSPLSNSAMNPTASNGSTFLDTFSRPT 111
Query: 326 PVLLLTNGPVP---SNEKLKLMISVVKPHIKQLVEHSNVLKMWITFMIPKIEDG--NNFG 380
+ + + P+P SN +M++ + QL WI+ + P ++ +N
Sbjct: 112 SSMAINHQPLPLQHSNSNANVMVNFTN-DVNQLCN-------WISMLTPSQQNTVMDNLL 163
Query: 381 VSIQEDIL 388
S+ E++L
Sbjct: 164 SSLNEEVL 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,803,624
Number of Sequences: 539616
Number of extensions: 7079870
Number of successful extensions: 21364
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 21275
Number of HSP's gapped (non-prelim): 88
length of query: 466
length of database: 191,569,459
effective HSP length: 121
effective length of query: 345
effective length of database: 126,275,923
effective search space: 43565193435
effective search space used: 43565193435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)