Your job contains 1 sequence.
>psy17514
MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT
LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS
VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17514
(159 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1C614 - symbol:E1C614 "Uncharacterized protein... 572 2.0e-54 1
UNIPROTKB|Q90988 - symbol:SMC2 "Structural maintenance of... 572 2.2e-54 1
MGI|MGI:106067 - symbol:Smc2 "structural maintenance of c... 564 1.6e-53 1
UNIPROTKB|D4A5Q2 - symbol:Smc2 "Structural maintenance of... 564 1.6e-53 1
RGD|1305227 - symbol:Smc2 "structural maintenance of chro... 564 1.8e-53 1
UNIPROTKB|E1C610 - symbol:E1C610 "Structural maintenance ... 563 2.0e-53 1
UNIPROTKB|E1C612 - symbol:E1C612 "Uncharacterized protein... 563 2.0e-53 1
UNIPROTKB|E1C782 - symbol:E1C782 "Uncharacterized protein... 563 2.1e-53 1
UNIPROTKB|E1C611 - symbol:E1C611 "Structural maintenance ... 563 2.1e-53 1
UNIPROTKB|F1SP73 - symbol:F1SP73 "Uncharacterized protein... 559 5.3e-53 1
UNIPROTKB|E2R7R8 - symbol:SMC2 "Structural maintenance of... 559 5.6e-53 1
UNIPROTKB|F1SRP0 - symbol:SMC2 "Structural maintenance of... 559 5.6e-53 1
UNIPROTKB|O95347 - symbol:SMC2 "Structural maintenance of... 559 5.6e-53 1
ZFIN|ZDB-GENE-030131-105 - symbol:smc2 "structural mainte... 553 2.7e-52 1
UNIPROTKB|F1MY41 - symbol:SMC2 "Structural maintenance of... 549 6.6e-52 1
DICTYBASE|DDB_G0284499 - symbol:smc2 "structural maintena... 545 1.7e-51 1
TAIR|locus:2167973 - symbol:SMC2 "AT5G62410" species:3702... 527 1.5e-49 1
TAIR|locus:2079107 - symbol:ATSMC2 "AT3G47460" species:37... 521 6.3e-49 1
FB|FBgn0027783 - symbol:SMC2 "SMC2" species:7227 "Drosoph... 521 6.5e-49 1
SGD|S000001927 - symbol:SMC2 "Subunit of the condensin co... 512 5.8e-48 1
CGD|CAL0000340 - symbol:SMC2 species:5476 "Candida albica... 496 3.0e-46 1
ASPGD|ASPL0000004872 - symbol:smcB species:162425 "Emeric... 481 1.2e-44 1
POMBASE|SPBP4H10.06c - symbol:cut14 "condensin complex su... 480 1.6e-44 1
GENEDB_PFALCIPARUM|MAL13P1.96 - symbol:MAL13P1.96 "chromo... 470 2.0e-43 1
UNIPROTKB|Q8IED2 - symbol:MAL13P1.96 "Structural maintena... 470 2.0e-43 1
WB|WBGene00003367 - symbol:mix-1 species:6239 "Caenorhabd... 396 1.7e-35 1
UNIPROTKB|Q09591 - symbol:mix-1 "Mitotic chromosome and X... 396 1.7e-35 1
ASPGD|ASPL0000008486 - symbol:sudA species:162425 "Emeric... 230 8.5e-18 1
FB|FBgn0015615 - symbol:Cap "Chromosome-associated protei... 224 3.8e-17 1
UNIPROTKB|Q10970 - symbol:smc "Chromosome partition prote... 221 7.6e-17 1
TAIR|locus:2045159 - symbol:TTN7 "AT2G27170" species:3702... 220 9.7e-17 1
WB|WBGene00004874 - symbol:smc-4 species:6239 "Caenorhabd... 221 1.1e-16 1
UNIPROTKB|Q20060 - symbol:smc-4 "Structural maintenance o... 221 1.1e-16 1
UNIPROTKB|Q81ZL2 - symbol:smc "Chromosome partition prote... 218 1.5e-16 1
TIGR_CMR|CBU_0540 - symbol:CBU_0540 "SMC family protein" ... 218 1.5e-16 1
TIGR_CMR|BA_3986 - symbol:BA_3986 "chromosome segregation... 217 2.0e-16 1
CGD|CAL0004031 - symbol:SMC3 species:5476 "Candida albica... 216 2.7e-16 1
CGD|CAL0003745 - symbol:SMC4 species:5476 "Candida albica... 215 3.9e-16 1
POMBASE|SPBC146.03c - symbol:cut3 "condensin complex subu... 213 6.1e-16 1
SGD|S000004076 - symbol:SMC4 "Subunit of the condensin co... 213 6.7e-16 1
POMBASE|SPAC10F6.09c - symbol:psm3 "mitotic cohesin compl... 212 6.9e-16 1
WB|WBGene00001086 - symbol:dpy-27 species:6239 "Caenorhab... 213 7.0e-16 1
UNIPROTKB|P48996 - symbol:dpy-27 "Chromosome condensation... 213 7.0e-16 1
FB|FBgn0015391 - symbol:glu "gluon" species:7227 "Drosoph... 210 1.4e-15 1
DICTYBASE|DDB_G0286403 - symbol:smc4 "structural maintena... 210 1.4e-15 1
SGD|S000003610 - symbol:SMC3 "Subunit of the multiprotein... 207 2.4e-15 1
RGD|62006 - symbol:Smc3 "structural maintenance of chromo... 203 6.2e-15 1
UNIPROTKB|P97690 - symbol:Smc3 "Structural maintenance of... 203 6.2e-15 1
UNIPROTKB|O93309 - symbol:smc3 "Structural maintenance of... 203 6.4e-15 1
UNIPROTKB|G3N365 - symbol:SMC3 "Structural maintenance of... 203 6.4e-15 1
ZFIN|ZDB-GENE-030131-3196 - symbol:smc3 "structural maint... 203 6.4e-15 1
UNIPROTKB|A7Z065 - symbol:SMC3 "Structural maintenance of... 203 6.4e-15 1
UNIPROTKB|E2R7T4 - symbol:SMC3 "Uncharacterized protein" ... 203 6.4e-15 1
UNIPROTKB|Q9UQE7 - symbol:SMC3 "Structural maintenance of... 203 6.4e-15 1
UNIPROTKB|Q5R4K5 - symbol:SMC3 "Structural maintenance of... 203 6.4e-15 1
MGI|MGI:1339795 - symbol:Smc3 "structural maintenance of ... 203 6.4e-15 1
UNIPROTKB|D4A1B9 - symbol:Smc3 "Structural maintenance of... 203 6.4e-15 1
UNIPROTKB|O97594 - symbol:SMC3 "Structural maintenance of... 203 6.4e-15 1
UNIPROTKB|Q97QG7 - symbol:smc "Chromosome partition prote... 201 1.0e-14 1
UNIPROTKB|P51834 - symbol:smc "Chromosome partition prote... 201 1.0e-14 1
ZFIN|ZDB-GENE-020419-21 - symbol:smc4 "structural mainten... 201 1.1e-14 1
TIGR_CMR|SO_2898 - symbol:SO_2898 "SMC family protein" sp... 200 1.2e-14 1
ASPGD|ASPL0000075987 - symbol:AN4597 species:162425 "Emer... 201 1.3e-14 1
WB|WBGene00004873 - symbol:smc-3 species:6239 "Caenorhabd... 199 1.8e-14 1
CGD|CAL0001080 - symbol:SMC1 species:5476 "Candida albica... 198 2.2e-14 1
UNIPROTKB|Q71YL3 - symbol:smC "Chromosome partition prote... 197 2.7e-14 1
UNIPROTKB|C9JR83 - symbol:SMC4 "Structural maintenance of... 188 4.4e-14 1
SGD|S000001886 - symbol:SMC1 "Subunit of the multiprotein... 195 4.6e-14 1
RGD|1306680 - symbol:Smc4 "structural maintenance of chro... 188 4.7e-14 1
UNIPROTKB|F1NDN4 - symbol:SMC4 "Structural maintenance of... 194 6.2e-14 1
UNIPROTKB|F1P3C6 - symbol:SMC4 "Structural maintenance of... 194 6.4e-14 1
UNIPROTKB|Q9X0R4 - symbol:smc "Chromosome partition prote... 191 1.2e-13 1
MGI|MGI:1917349 - symbol:Smc4 "structural maintenance of ... 191 1.3e-13 1
TIGR_CMR|CHY_1443 - symbol:CHY_1443 "chromosome segregati... 190 1.5e-13 1
UNIPROTKB|F1NEA6 - symbol:SMC3 "Uncharacterized protein" ... 190 1.6e-13 1
UNIPROTKB|E2RCX4 - symbol:SMC4 "Structural maintenance of... 189 2.1e-13 1
UNIPROTKB|P50532 - symbol:smc4 "Structural maintenance of... 189 2.1e-13 1
UNIPROTKB|E9PD53 - symbol:SMC4 "Structural maintenance of... 188 2.7e-13 1
UNIPROTKB|F1MAD9 - symbol:Smc4 "Structural maintenance of... 188 2.7e-13 1
UNIPROTKB|Q9NTJ3 - symbol:SMC4 "Structural maintenance of... 188 2.7e-13 1
UNIPROTKB|F1SH51 - symbol:SMC4 "Structural maintenance of... 188 2.7e-13 1
UNIPROTKB|Q5LNH7 - symbol:smc "Chromosome partition prote... 187 3.0e-13 1
TIGR_CMR|SPO_3228 - symbol:SPO_3228 "SMC protein" species... 187 3.0e-13 1
GENEDB_PFALCIPARUM|PFD0685c - symbol:PFD0685c "chromosome... 187 3.2e-13 1
UNIPROTKB|Q8I1U7 - symbol:PFD0685c "Structural maintenanc... 187 3.2e-13 1
UNIPROTKB|F1NYB2 - symbol:SMC3 "Uncharacterized protein" ... 185 5.3e-13 1
UNIPROTKB|E1BMZ9 - symbol:SMC4 "Structural maintenance of... 185 5.7e-13 1
UNIPROTKB|O93308 - symbol:smc1a "Structural maintenance o... 184 6.9e-13 1
UNIPROTKB|G3X7C0 - symbol:SMC1A "Structural maintenance o... 182 1.1e-12 1
UNIPROTKB|O97593 - symbol:SMC1A "Structural maintenance o... 182 1.1e-12 1
UNIPROTKB|E2QV07 - symbol:SMC1A "Structural maintenance o... 182 1.1e-12 1
UNIPROTKB|Q14683 - symbol:SMC1A "Structural maintenance o... 182 1.1e-12 1
UNIPROTKB|F2Z5A8 - symbol:LOC100523938 "Structural mainte... 182 1.1e-12 1
MGI|MGI:1344345 - symbol:Smc1a "structural maintenance of... 182 1.1e-12 1
RGD|61991 - symbol:Smc1a "structural maintenance of chrom... 182 1.1e-12 1
UNIPROTKB|Q9Z1M9 - symbol:Smc1a "Structural maintenance o... 182 1.1e-12 1
UNIPROTKB|I3LMC6 - symbol:LOC100523938 "Structural mainte... 182 1.1e-12 1
GENEDB_PFALCIPARUM|PF11_0317 - symbol:PF11_0317 "structur... 183 1.4e-12 1
UNIPROTKB|Q8II57 - symbol:PF11_0317 "Structural maintenan... 183 1.4e-12 1
TIGR_CMR|GSU_1130 - symbol:GSU_1130 "chromosome segregati... 178 2.8e-12 1
WARNING: Descriptions of 38 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E1C614 [details] [associations]
symbol:E1C614 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819568
Ensembl:ENSGALT00000037605 OMA:FESINES ArrayExpress:E1C614
Uniprot:E1C614
Length = 1149
Score = 572 (206.4 bits), Expect = 2.0e-54, P = 2.0e-54
Identities = 108/160 (67%), Positives = 132/160 (82%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MYIKS+VL+GFKSY R EI DFD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MYIKSIVLEGFKSYAQRTEIRDFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+LQ+L+YKNGQAGV KA+V++TFDNSDKKN P+G+EN++ I I RQ+ + +Y+ING
Sbjct: 61 SLQDLVYKNGQAGVNKATVSITFDNSDKKNSPLGFENNDEITITRQVIVGGRNKYLINGM 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ + RV DLF SV LNVNNPHFLIMQG++TKVLNMKP E
Sbjct: 121 NASNNRVQDLFGSVGLNVNNPHFLIMQGQITKVLNMKPTE 160
>UNIPROTKB|Q90988 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9031 "Gallus gallus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:X80792 IPI:IPI00579121 PIR:A54817
RefSeq:NP_990561.1 UniGene:Gga.4066 ProteinModelPortal:Q90988
PRIDE:Q90988 GeneID:396156 KEGG:gga:396156 CTD:10592
HOVERGEN:HBG106605 NextBio:20816212 Uniprot:Q90988
Length = 1189
Score = 572 (206.4 bits), Expect = 2.2e-54, P = 2.2e-54
Identities = 108/160 (67%), Positives = 132/160 (82%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MYIKS+VL+GFKSY R EI DFD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MYIKSIVLEGFKSYAQRTEIRDFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+LQ+L+YKNGQAGV KA+V++TFDNSDKKN P+G+EN++ I I RQ+ + +Y+ING
Sbjct: 61 SLQDLVYKNGQAGVNKATVSITFDNSDKKNSPLGFENNDEITITRQVIVGGRNKYLINGM 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ + RV DLF SV LNVNNPHFLIMQG++TKVLNMKP E
Sbjct: 121 NASNNRVQDLFGSVGLNVNNPHFLIMQGQITKVLNMKPTE 160
>MGI|MGI:106067 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=ISO]
[GO:0000793 "condensed chromosome" evidence=ISO;IDA] [GO:0000796
"condensin complex" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=ISO] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:106067 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0006281 EMBL:CH466565
GO:GO:0006310 GO:GO:0045132 GO:GO:0000793 GO:GO:0007076
GO:GO:0051383 GO:GO:0000228 GO:GO:0000796 GO:GO:0010032
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
OMA:CQNGKIP CTD:10592 HOVERGEN:HBG106605 OrthoDB:EOG49S65K
EMBL:AJ534939 EMBL:AK013109 EMBL:AK019977 EMBL:AL732619
EMBL:BC094380 EMBL:U42385 IPI:IPI00987134 RefSeq:NP_032043.3
UniGene:Mm.2999 PDB:3L51 PDBsum:3L51 ProteinModelPortal:Q8CG48
SMR:Q8CG48 IntAct:Q8CG48 STRING:Q8CG48 PhosphoSite:Q8CG48
PaxDb:Q8CG48 PRIDE:Q8CG48 Ensembl:ENSMUST00000102915
Ensembl:ENSMUST00000117280 GeneID:14211 KEGG:mmu:14211
InParanoid:Q52KE9 EvolutionaryTrace:Q8CG48 NextBio:285461
Bgee:Q8CG48 CleanEx:MM_SMC2 Genevestigator:Q8CG48
GermOnline:ENSMUSG00000028312 Uniprot:Q8CG48
Length = 1191
Score = 564 (203.6 bits), Expect = 1.6e-53, P = 1.6e-53
Identities = 106/160 (66%), Positives = 129/160 (80%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MY+KS++L+GFKSY R E+N FD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+L+YKNGQAG+TKASV++TFDNSDKK P+G+E + I + RQ+ I +Y+ING
Sbjct: 61 NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEAHDEITVTRQVVIGGRNKYLINGV 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ N RV DLF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE 160
>UNIPROTKB|D4A5Q2 [details] [associations]
symbol:Smc2 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 RGD:1305227 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
CTD:10592 OrthoDB:EOG49S65K IPI:IPI00950982 RefSeq:NP_001102136.2
Ensembl:ENSRNOT00000066226 GeneID:362519 KEGG:rno:362519
ArrayExpress:D4A5Q2 Uniprot:D4A5Q2
Length = 1191
Score = 564 (203.6 bits), Expect = 1.6e-53, P = 1.6e-53
Identities = 106/160 (66%), Positives = 129/160 (80%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MY+KS++L+GFKSY R E+N FD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+L+YKNGQAG+TKASV++TFDNSDKK P+G+E + I + RQ+ I +Y+ING
Sbjct: 61 NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEAHDEITVTRQVVIGGRNKYLINGV 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ N RV DLF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE 160
>RGD|1305227 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=ISO] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000796 "condensin complex" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA;ISO] [GO:0010032
"meiotic chromosome condensation" evidence=ISO] [GO:0045132
"meiotic chromosome segregation" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051383 "kinetochore
organization" evidence=ISO] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 RGD:1305227 GO:GO:0005524
GO:GO:0005737 GO:GO:0006281 GO:GO:0006310 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
PANTHER:PTHR18937:SF9 IPI:IPI00358733 PRIDE:D4AB57
Ensembl:ENSRNOT00000030563 UCSC:RGD:1305227 ArrayExpress:D4AB57
Uniprot:D4AB57
Length = 1230
Score = 564 (203.6 bits), Expect = 1.8e-53, P = 1.8e-53
Identities = 106/160 (66%), Positives = 129/160 (80%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MY+KS++L+GFKSY R E+N FD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MYVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+L+YKNGQAG+TKASV++TFDNSDKK P+G+E + I + RQ+ I +Y+ING
Sbjct: 61 NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEAHDEITVTRQVVIGGRNKYLINGV 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ N RV DLF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE 160
>UNIPROTKB|E1C610 [details] [associations]
symbol:E1C610 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0000796 "condensin
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00823281
Ensembl:ENSGALT00000037611 ArrayExpress:E1C610 Uniprot:E1C610
Length = 1173
Score = 563 (203.2 bits), Expect = 2.0e-53, P = 2.0e-53
Identities = 108/161 (67%), Positives = 132/161 (81%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MYIKS+VL+GFKSY R EI DFD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MYIKSIVLEGFKSYAQRTEIRDFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+LQ+L+YKNGQAGV KA+V++TFDNSDKKN P+G+EN++ I I RQ+ + +Y+ING
Sbjct: 61 SLQDLVYKNGQAGVNKATVSITFDNSDKKNSPLGFENNDEITITRQVIVGGRNKYLINGM 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQ-GRVTKVLNMKPHE 159
+ + RV DLF SV LNVNNPHFLIMQ G++TKVLNMKP E
Sbjct: 121 NASNNRVQDLFGSVGLNVNNPHFLIMQQGQITKVLNMKPTE 161
>UNIPROTKB|E1C612 [details] [associations]
symbol:E1C612 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819262
Ensembl:ENSGALT00000037609 ArrayExpress:E1C612 Uniprot:E1C612
Length = 1173
Score = 563 (203.2 bits), Expect = 2.0e-53, P = 2.0e-53
Identities = 108/161 (67%), Positives = 132/161 (81%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MYIKS+VL+GFKSY R EI DFD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MYIKSIVLEGFKSYAQRTEIRDFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+LQ+L+YKNGQAGV KA+V++TFDNSDKKN P+G+EN++ I I RQ+ + +Y+ING
Sbjct: 61 SLQDLVYKNGQAGVNKATVSITFDNSDKKNSPLGFENNDEITITRQVIVGGRNKYLINGM 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQ-GRVTKVLNMKPHE 159
+ + RV DLF SV LNVNNPHFLIMQ G++TKVLNMKP E
Sbjct: 121 NASNNRVQDLFGSVGLNVNNPHFLIMQQGQITKVLNMKPTE 161
>UNIPROTKB|E1C782 [details] [associations]
symbol:E1C782 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
IPI:IPI00579121 EMBL:AADN02057751 EMBL:AADN02057752
EMBL:AADN02057753 EMBL:AADN02057754 EMBL:AADN02057755
Ensembl:ENSGALT00000025306 ArrayExpress:E1C782 Uniprot:E1C782
Length = 1190
Score = 563 (203.2 bits), Expect = 2.1e-53, P = 2.1e-53
Identities = 108/161 (67%), Positives = 132/161 (81%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MYIKS+VL+GFKSY R EI DFD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MYIKSIVLEGFKSYAQRTEIRDFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+LQ+L+YKNGQAGV KA+V++TFDNSDKKN P+G+EN++ I I RQ+ + +Y+ING
Sbjct: 61 SLQDLVYKNGQAGVNKATVSITFDNSDKKNSPLGFENNDEITITRQVIVGGRNKYLINGM 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQ-GRVTKVLNMKPHE 159
+ + RV DLF SV LNVNNPHFLIMQ G++TKVLNMKP E
Sbjct: 121 NASNNRVQDLFGSVGLNVNNPHFLIMQQGQITKVLNMKPTE 161
>UNIPROTKB|E1C611 [details] [associations]
symbol:E1C611 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00818627
Ensembl:ENSGALT00000037610 ArrayExpress:E1C611 Uniprot:E1C611
Length = 1192
Score = 563 (203.2 bits), Expect = 2.1e-53, P = 2.1e-53
Identities = 108/161 (67%), Positives = 132/161 (81%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MYIKS+VL+GFKSY R EI DFD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MYIKSIVLEGFKSYAQRTEIRDFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+LQ+L+YKNGQAGV KA+V++TFDNSDKKN P+G+EN++ I I RQ+ + +Y+ING
Sbjct: 61 SLQDLVYKNGQAGVNKATVSITFDNSDKKNSPLGFENNDEITITRQVIVGGRNKYLINGM 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQ-GRVTKVLNMKPHE 159
+ + RV DLF SV LNVNNPHFLIMQ G++TKVLNMKP E
Sbjct: 121 NASNNRVQDLFGSVGLNVNNPHFLIMQQGQITKVLNMKPTE 161
>UNIPROTKB|F1SP73 [details] [associations]
symbol:F1SP73 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:WIASERQ
Ensembl:ENSSSCT00000005947 Uniprot:F1SP73
Length = 1169
Score = 559 (201.8 bits), Expect = 5.3e-53, P = 5.3e-53
Identities = 106/160 (66%), Positives = 129/160 (80%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
M+IKS++L+GFKSY R E+N FD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+L+YKNGQAG+TKASV++TFDNSDKK P+G+E + I + RQ+ I +Y+ING
Sbjct: 61 NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEVHDEITVTRQVVIGGRNKYLINGV 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ N RV DLF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE 160
>UNIPROTKB|E2R7R8 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:AAEX03008008 Ensembl:ENSCAFT00000004208 Uniprot:E2R7R8
Length = 1191
Score = 559 (201.8 bits), Expect = 5.6e-53, P = 5.6e-53
Identities = 105/160 (65%), Positives = 129/160 (80%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
M++KS++L+GFKSY R E+N FD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MHVKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+L+YKNGQAG+TKASV++TFDNSDKK P+G+E + I + RQ+ I +Y+ING
Sbjct: 61 NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEVHDEITVTRQVVIGGRNKYLINGV 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ N RV DLF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 NANNSRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE 160
>UNIPROTKB|F1SRP0 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:CU861938 Ensembl:ENSSSCT00000005946 Uniprot:F1SRP0
Length = 1191
Score = 559 (201.8 bits), Expect = 5.6e-53, P = 5.6e-53
Identities = 106/160 (66%), Positives = 129/160 (80%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
M+IKS++L+GFKSY R E+N FD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+L+YKNGQAG+TKASV++TFDNSDKK P+G+E + I + RQ+ I +Y+ING
Sbjct: 61 NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEVHDEITVTRQVVIGGRNKYLINGV 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ N RV DLF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE 160
>UNIPROTKB|O95347 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0010032 "meiotic chromosome condensation"
evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0007076 "mitotic chromosome condensation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000793
"condensed chromosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 GO:GO:0006281
GO:GO:0006310 EMBL:CH471105 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HOGENOM:HOG000228249 OMA:CQNGKIP
CTD:10592 HOVERGEN:HBG106605 EMBL:AF092563 EMBL:AL833191
EMBL:AL161791 EMBL:AL354938 EMBL:BC130385 EMBL:AF113673
EMBL:BN000163 IPI:IPI00007927 IPI:IPI00232806 RefSeq:NP_001036015.1
RefSeq:NP_001036016.1 RefSeq:NP_001252531.1 RefSeq:NP_006435.2
UniGene:Hs.119023 ProteinModelPortal:O95347 SMR:O95347
DIP:DIP-35422N IntAct:O95347 MINT:MINT-1161754 STRING:O95347
PhosphoSite:O95347 PaxDb:O95347 PRIDE:O95347
Ensembl:ENST00000286398 Ensembl:ENST00000303219
Ensembl:ENST00000374787 Ensembl:ENST00000374793
Ensembl:ENST00000493955 GeneID:10592 KEGG:hsa:10592 UCSC:uc004bbv.3
GeneCards:GC09P106856 H-InvDB:HIX0008250 HGNC:HGNC:14011 MIM:605576
neXtProt:NX_O95347 PharmGKB:PA37833 InParanoid:O95347
OrthoDB:EOG49S65K ChiTaRS:SMC2 GenomeRNAi:10592 NextBio:40225
ArrayExpress:O95347 Bgee:O95347 CleanEx:HS_SMC2
Genevestigator:O95347 GermOnline:ENSG00000136824 Uniprot:O95347
Length = 1197
Score = 559 (201.8 bits), Expect = 5.6e-53, P = 5.6e-53
Identities = 106/160 (66%), Positives = 129/160 (80%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
M+IKS++L+GFKSY R E+N FD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MHIKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+L+YKNGQAG+TKASV++TFDNSDKK P+G+E + I + RQ+ I +Y+ING
Sbjct: 61 NLQDLVYKNGQAGITKASVSITFDNSDKKQSPLGFEVHDEITVTRQVVIGGRNKYLINGV 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ N RV DLF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 NANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE 160
>ZFIN|ZDB-GENE-030131-105 [details] [associations]
symbol:smc2 "structural maintenance of chromosomes
2" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 ZFIN:ZDB-GENE-030131-105 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
PANTHER:PTHR18937:SF9 EMBL:BX548248 IPI:IPI00500731
Ensembl:ENSDART00000008616 ArrayExpress:F1R0P1 Bgee:F1R0P1
Uniprot:F1R0P1
Length = 1232
Score = 553 (199.7 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 107/160 (66%), Positives = 127/160 (79%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MYIKS+VL+GFKSY R EIN FD FNAITGLNG+GKSNILD ICF+LGI + QVRA
Sbjct: 1 MYIKSIVLEGFKSYAERTEINGFDPFFNAITGLNGSGKSNILDSICFLLGISNLSQVRAT 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+L+YKNG AG+TKA+V++TFDNS+KK P+G+E + I I RQ+ I +Y+ING
Sbjct: 61 NLQDLVYKNGLAGITKATVSITFDNSNKKQSPLGFETHDEITITRQVVIGGRNKYLINGV 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ N RV DLF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 NANNLRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPE 160
>UNIPROTKB|F1MY41 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0000796 "condensin complex"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000228
"nuclear chromosome" evidence=ISS] [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0046982 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:DAAA02024368 IPI:IPI01001793 Ensembl:ENSBTAT00000011562
NextBio:20877854 Uniprot:F1MY41
Length = 1191
Score = 549 (198.3 bits), Expect = 6.6e-52, P = 6.6e-52
Identities = 104/160 (65%), Positives = 128/160 (80%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
M+IKS++L+GFKSY R E+N FD FNAITGLNG+GKSNILD ICF+LGI + QVRA+
Sbjct: 1 MHIKSVILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+L+YKNGQAG+TKA V++TFDNSDKK P+G+E + I + RQ+ I +Y+ING
Sbjct: 61 NLQDLVYKNGQAGITKALVSITFDNSDKKQSPLGFEVHDEITVTRQVVIGGRNKYLINGV 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ N RV DLF SV LNVNNPHFLIMQGR+TKV+NMKP E
Sbjct: 121 NANNTRVYDLFCSVGLNVNNPHFLIMQGRITKVMNMKPPE 160
>DICTYBASE|DDB_G0284499 [details] [associations]
symbol:smc2 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA;ISS] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0284499 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 EMBL:AAFI02000066 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HSSP:P32908 OMA:CQNGKIP RefSeq:XP_638528.1
ProteinModelPortal:Q54PK4 STRING:Q54PK4 PRIDE:Q54PK4
EnsemblProtists:DDB0219933 GeneID:8624621 KEGG:ddi:DDB_G0284499
ProtClustDB:CLSZ2430256 Uniprot:Q54PK4
Length = 1184
Score = 545 (196.9 bits), Expect = 1.7e-51, P = 1.7e-51
Identities = 104/160 (65%), Positives = 125/160 (78%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MYI+ +++DGFKSY R I FD FNAITGLNG+GKSNILD ICFVLGI + QVR +
Sbjct: 1 MYIEDIIIDGFKSYANRTVIEGFDPTFNAITGLNGSGKSNILDSICFVLGISNLSQVRVD 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+LQEL+YK GQAG+TKASVT+TF+NSDKK P GYE+ + I + RQ++I +Y+ING
Sbjct: 61 SLQELVYKKGQAGITKASVTITFNNSDKKQSPAGYEHLDKITVTRQVAIGGRNKYLINGH 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ RV DLF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 NAQLSRVQDLFHSVQLNVNNPHFLIMQGRITKVLNMKPPE 160
>TAIR|locus:2167973 [details] [associations]
symbol:SMC2 "AT5G62410" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000796 "condensin
complex" evidence=ISS] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0031047 "gene silencing by RNA" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051607 "defense
response to virus" evidence=RCA] [GO:0051726 "regulation of cell
cycle" evidence=RCA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AB015469 EMBL:AB019235 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:AF271730 EMBL:AF271731 EMBL:AF306547
IPI:IPI00534765 RefSeq:NP_201047.1 UniGene:At.19029 HSSP:P32908
ProteinModelPortal:Q9C5Y4 SMR:Q9C5Y4 STRING:Q9C5Y4 PaxDb:Q9C5Y4
PRIDE:Q9C5Y4 EnsemblPlants:AT5G62410.1 GeneID:836362
KEGG:ath:AT5G62410 TAIR:At5g62410 HOGENOM:HOG000163792
InParanoid:Q9C5Y4 OMA:CQNGKIP PhylomeDB:Q9C5Y4
ProtClustDB:CLSN2685173 Genevestigator:Q9C5Y4 Uniprot:Q9C5Y4
Length = 1175
Score = 527 (190.6 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 100/160 (62%), Positives = 123/160 (76%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGI-QVKQVRAN 59
M+IK + L+GFKSY TR ++ FD FNAITGLNG+GKSNILD ICFVLGI ++QVRA
Sbjct: 1 MHIKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQEL+YK GQAG+TKA+V++TFDNS++ P+GYE I + RQI + +Y+ING
Sbjct: 61 NLQELVYKQGQAGITKATVSVTFDNSERHRSPLGYEEHPEITVTRQIVVGGRNKYLINGK 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
P +V +LF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 LAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPE 160
>TAIR|locus:2079107 [details] [associations]
symbol:ATSMC2 "AT3G47460" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005694 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AL096860 EMBL:AL132955 UniGene:At.35803
UniGene:At.71101 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HSSP:P32908 HOGENOM:HOG000163792
ProtClustDB:CLSN2685173 IPI:IPI00530229 PIR:T45706
RefSeq:NP_190330.1 ProteinModelPortal:Q9SN90 SMR:Q9SN90
STRING:Q9SN90 PaxDb:Q9SN90 PRIDE:Q9SN90 EnsemblPlants:AT3G47460.1
GeneID:823900 KEGG:ath:AT3G47460 TAIR:At3g47460 InParanoid:Q9SN90
OMA:WIASERQ PhylomeDB:Q9SN90 Genevestigator:Q9SN90 Uniprot:Q9SN90
Length = 1171
Score = 521 (188.5 bits), Expect = 6.3e-49, P = 6.3e-49
Identities = 98/160 (61%), Positives = 124/160 (77%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGI-QVKQVRAN 59
M+IK + L+GFKSY TR + FD FNAITGLNG+GKSNILD ICFVLGI ++QVRA
Sbjct: 1 MHIKEICLEGFKSYATRTVVPGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAA 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQEL+YK GQAG+T+A+V++TFDNS++ P+G+E+ + I + RQI + +Y+ING
Sbjct: 61 NLQELVYKQGQAGITRATVSVTFDNSERNRSPLGHEDHSEITVTRQIVVGGKNKYLINGK 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
P +V +LF SV LNVNNPHFLIMQGR+TKVLNMKP E
Sbjct: 121 LAQPNQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPME 160
>FB|FBgn0027783 [details] [associations]
symbol:SMC2 "SMC2" species:7227 "Drosophila melanogaster"
[GO:0007062 "sister chromatid cohesion" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0000796 "condensin complex" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 EMBL:AE013599 GO:GO:0005524
GO:GO:0005634 GO:GO:0005875 GO:GO:0007052 GO:GO:0022008
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
KO:K06674 PANTHER:PTHR18937:SF9 OMA:CQNGKIP CTD:10592 HSSP:Q9X0R4
EMBL:AF179287 RefSeq:NP_610995.1 UniGene:Dm.2168 SMR:Q7KK96
STRING:Q7KK96 EnsemblMetazoa:FBtr0087461 GeneID:36653
KEGG:dme:Dmel_CG10212 UCSC:CG10212-RA FlyBase:FBgn0027783
InParanoid:Q7KK96 OrthoDB:EOG4P5HR3 GenomeRNAi:36653 NextBio:799708
Uniprot:Q7KK96
Length = 1179
Score = 521 (188.5 bits), Expect = 6.5e-49, P = 6.5e-49
Identities = 97/160 (60%), Positives = 122/160 (76%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MY+K +VLDGFKSYG R EI FD EF AITGLNG+GKSNILD ICFVLGI ++ VRA+
Sbjct: 1 MYVKKLVLDGFKSYGRRTEIEGFDPEFTAITGLNGSGKSNILDSICFVLGISNLQNVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+L+YKNGQAG+TKA+VT+ FDN++ CP GYE I + RQ+ + +++ING
Sbjct: 61 ALQDLVYKNGQAGITKATVTIVFDNTNPAQCPQGYEKCREISVTRQVVVGGKNKFLINGK 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V K+V D F S+ LNVNNP+FLIMQG++ +VLNMKP E
Sbjct: 121 LVQNKKVQDFFCSIQLNVNNPNFLIMQGKIQQVLNMKPKE 160
>SGD|S000001927 [details] [associations]
symbol:SMC2 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003680 "AT DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0000799 "nuclear condensin complex"
evidence=ISS;TAS;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;IMP;TAS]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0000217 "DNA secondary
structure binding" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 SGD:S000001927 Pfam:PF02463 GO:GO:0005739
GO:GO:0005524 GO:GO:0051301 GO:GO:0006281 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0007076
GO:GO:0003680 GO:GO:0000799 GO:GO:0070058 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:U05820
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
GO:GO:0000217 HOGENOM:HOG000163792 OrthoDB:EOG4P2T9B PIR:A56157
RefSeq:NP_116687.1 ProteinModelPortal:P38989 SMR:P38989
DIP:DIP-2983N IntAct:P38989 MINT:MINT-435495 STRING:P38989
PaxDb:P38989 EnsemblFungi:YFR031C GeneID:850589 KEGG:sce:YFR031C
CYGD:YFR031c OMA:SECESAE NextBio:966434 Genevestigator:P38989
GermOnline:YFR031C Uniprot:P38989
Length = 1170
Score = 512 (185.3 bits), Expect = 5.8e-48, P = 5.8e-48
Identities = 97/160 (60%), Positives = 123/160 (76%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGI-QVKQVRAN 59
M ++ +++DGFKSY TR I D+D +FNAITGLNG+GKSNILD ICFVLGI + VRA+
Sbjct: 1 MKVEELIIDGFKSYATRTVITDWDPQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+LQ+LIYK GQAGVTKASVT+ FDN+DK N PIG+ N I + RQ+ + ++Y+ING
Sbjct: 61 SLQDLIYKRGQAGVTKASVTIVFDNTDKSNSPIGFTNSPQISVTRQVVLGGTSKYLINGH 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ V LF SV LN+NNP+FLIMQG++TKVLNMKP E
Sbjct: 121 RAPQQSVLQLFQSVQLNINNPNFLIMQGKITKVLNMKPSE 160
>CGD|CAL0000340 [details] [associations]
symbol:SMC2 species:5476 "Candida albicans" [GO:0003680 "AT
DNA binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0000939 "condensed chromosome inner kinetochore" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000799 "nuclear condensin complex" evidence=IEA]
[GO:0070058 "tRNA gene clustering" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0000340
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:AACQ01000103 EMBL:AACQ01000102
KO:K06674 PANTHER:PTHR18937:SF9 RefSeq:XP_714465.1
RefSeq:XP_714514.1 ProteinModelPortal:Q59Y26 STRING:Q59Y26
GeneID:3643867 GeneID:3643918 KEGG:cal:CaO19.11106
KEGG:cal:CaO19.3623 Uniprot:Q59Y26
Length = 1171
Score = 496 (179.7 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 95/160 (59%), Positives = 122/160 (76%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGI-QVKQVRAN 59
M + +++DGFKSY R I+++D +FNAITGLNG+GKSNILD ICFVLGI + VRA+
Sbjct: 1 MKVDELIIDGFKSYAVRTVISNWDAQFNAITGLNGSGKSNILDAICFVLGIASMSTVRAS 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+LIYK GQAGVTKASVT+ F+NS+ PIG+EN TI + RQI + ++Y+ING
Sbjct: 61 NLQDLIYKRGQAGVTKASVTIVFNNSEVSKSPIGFENCPTISVTRQIILGGTSKYLINGH 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ V +LF SV LN+NNP+FLIMQG++TKVLNMKP E
Sbjct: 121 KAQQQTVLNLFQSVQLNINNPNFLIMQGKITKVLNMKPSE 160
>ASPGD|ASPL0000004872 [details] [associations]
symbol:smcB species:162425 "Emericella nidulans"
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000796 "condensin
complex" evidence=IEA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
EMBL:BN001301 GO:GO:0006310 GO:GO:0030261 EMBL:AACD01000101
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HOGENOM:HOG000163792 OMA:CQNGKIP
OrthoDB:EOG4P2T9B RefSeq:XP_663503.1 ProteinModelPortal:Q5B0N1
STRING:Q5B0N1 EnsemblFungi:CADANIAT00007134 GeneID:2870708
KEGG:ani:AN5899.2 Uniprot:Q5B0N1
Length = 1179
Score = 481 (174.4 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 95/160 (59%), Positives = 116/160 (72%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGI-QVKQVRAN 59
M I +++DGFKSY R I+ +D FN+ITGLNG+GKSNILD ICFVLGI + VRA
Sbjct: 1 MRITEIIIDGFKSYAVRTVISGWDESFNSITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+LIYK GQAGVTKASVT+ FDN D PIG+E TI + RQI + ++Y+ING
Sbjct: 61 NLQDLIYKRGQAGVTKASVTIVFDNRDTAKSPIGFEEYATISVTRQIVLGGTSKYLINGH 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ V +LF SV LN+NNP+FLIMQGR+TKVLNMK E
Sbjct: 121 RAQQQTVQNLFQSVQLNINNPNFLIMQGRITKVLNMKAVE 160
>POMBASE|SPBP4H10.06c [details] [associations]
symbol:cut14 "condensin complex subunit Cut14"
species:4896 "Schizosaccharomyces pombe" [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=ISM] [GO:0051304 "chromosome
separation" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBP4H10.06c Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0051301 EMBL:CU329671
GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HOGENOM:HOG000163792 EMBL:D30787 PIR:S51623 RefSeq:NP_596180.1
ProteinModelPortal:P41003 IntAct:P41003 STRING:P41003
EnsemblFungi:SPBP4H10.06c.1 GeneID:2541319 KEGG:spo:SPBP4H10.06c
OMA:GTALEIC OrthoDB:EOG4P2T9B NextBio:20802429 GO:GO:0034500
Uniprot:P41003
Length = 1172
Score = 480 (174.0 bits), Expect = 1.6e-44, P = 1.6e-44
Identities = 92/160 (57%), Positives = 120/160 (75%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGI-QVKQVRAN 59
M I+ +++DGFKSY R I+++D +FNAITGLNG+GKSNILD ICFVLGI + VRA
Sbjct: 1 MKIEELIIDGFKSYAVRTVISNWDDQFNAITGLNGSGKSNILDAICFVLGITNMSTVRAQ 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
LQ+LIYK GQAG+T+ASVT+ F+N D + PIG+EN + + RQI + ++Y+ING
Sbjct: 61 NLQDLIYKRGQAGITRASVTIVFNNRDPASSPIGFENHPQVSVTRQIIMGGTSKYLINGH 120
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ V +LF SV LN+NNP+FLIMQGR+TKVLNMK E
Sbjct: 121 RALQQNVQNLFQSVQLNINNPNFLIMQGRITKVLNMKATE 160
>GENEDB_PFALCIPARUM|MAL13P1.96 [details] [associations]
symbol:MAL13P1.96 "chromosome segregation
protein, putative" species:5833 "Plasmodium falciparum" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISS]
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0046982 GO:GO:0007076 EMBL:AL844509
GO:GO:0000796 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HSSP:P32908 HOGENOM:HOG000163792 OMA:CQNGKIP
RefSeq:XP_001349920.1 ProteinModelPortal:Q8IED2 IntAct:Q8IED2
MINT:MINT-1645015 PRIDE:Q8IED2 EnsemblProtists:MAL13P1.96:mRNA
GeneID:813987 KEGG:pfa:MAL13P1.96 EuPathDB:PlasmoDB:PF3D7_1318400
ProtClustDB:CLSZ2432256 Uniprot:Q8IED2
Length = 1218
Score = 470 (170.5 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 90/162 (55%), Positives = 117/162 (72%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MYI+ ++LDGFKSY T+ I F +FNAITGLNG+GKSN+LD ICFV+GI + +R N
Sbjct: 1 MYIEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVN 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIG--YENDNTIVICRQISIPSNTRYMIN 117
L ELIYK GQAG+TK SVT+ F+N +K + P+ Y + I I RQI + RY++N
Sbjct: 61 RLDELIYKQGQAGITKGSVTIKFNNEEKPS-PLQEPYRDMKNITITRQIVLGGRNRYLLN 119
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ PK +SD F S+ LN+NNPHFLIMQG++TKV+NMKP E
Sbjct: 120 SHNAKPKDISDFFQSLKLNINNPHFLIMQGKITKVINMKPIE 161
>UNIPROTKB|Q8IED2 [details] [associations]
symbol:MAL13P1.96 "Structural maintenance of chromosomes
protein 2" species:36329 "Plasmodium falciparum 3D7" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISS] [GO:0000796
"condensin complex" evidence=ISS] [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0051301 GO:GO:0046982
GO:GO:0007076 EMBL:AL844509 GO:GO:0000796 eggNOG:COG1196
SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9 HSSP:P32908
HOGENOM:HOG000163792 OMA:CQNGKIP RefSeq:XP_001349920.1
ProteinModelPortal:Q8IED2 IntAct:Q8IED2 MINT:MINT-1645015
PRIDE:Q8IED2 EnsemblProtists:MAL13P1.96:mRNA GeneID:813987
KEGG:pfa:MAL13P1.96 EuPathDB:PlasmoDB:PF3D7_1318400
ProtClustDB:CLSZ2432256 Uniprot:Q8IED2
Length = 1218
Score = 470 (170.5 bits), Expect = 2.0e-43, P = 2.0e-43
Identities = 90/162 (55%), Positives = 117/162 (72%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MYI+ ++LDGFKSY T+ I F +FNAITGLNG+GKSN+LD ICFV+GI + +R N
Sbjct: 1 MYIEEIILDGFKSYPTKTVIGPFHPQFNAITGLNGSGKSNVLDAICFVMGINNLNLIRVN 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIG--YENDNTIVICRQISIPSNTRYMIN 117
L ELIYK GQAG+TK SVT+ F+N +K + P+ Y + I I RQI + RY++N
Sbjct: 61 RLDELIYKQGQAGITKGSVTIKFNNEEKPS-PLQEPYRDMKNITITRQIVLGGRNRYLLN 119
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ PK +SD F S+ LN+NNPHFLIMQG++TKV+NMKP E
Sbjct: 120 SHNAKPKDISDFFQSLKLNINNPHFLIMQGKITKVINMKPIE 161
>WB|WBGene00003367 [details] [associations]
symbol:mix-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0042464 "dosage
compensation by hypoactivation of X chromosome" evidence=IMP]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000775
"chromosome, centromeric region" evidence=IDA] [GO:0046536 "dosage
compensation complex" evidence=IPI] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0000775
GO:GO:0051301 GO:GO:0002119 GO:GO:0040039 GO:GO:0000793
GO:GO:0007076 EMBL:Z46935 GO:GO:0042464 eggNOG:COG1196
GO:GO:0046536 SUPFAM:SSF75553 EMBL:U96387 PIR:T23744 PIR:T23981
RefSeq:NP_496331.1 UniGene:Cel.8608 ProteinModelPortal:Q09591
SMR:Q09591 IntAct:Q09591 STRING:Q09591 PaxDb:Q09591
EnsemblMetazoa:M106.1 GeneID:174669 KEGG:cel:CELE_M106.1
UCSC:M106.1 CTD:174669 WormBase:M106.1 GeneTree:ENSGT00550000074857
HOGENOM:HOG000016791 InParanoid:Q09591 KO:K06674 OMA:KSYQKHT
NextBio:884988 PANTHER:PTHR18937:SF9 Uniprot:Q09591
Length = 1244
Score = 396 (144.5 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 85/165 (51%), Positives = 109/165 (66%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGI-QVKQVRAN 59
M+IKS+ LDGFKSY +I DF FNAITG NG+GKSNILD ICF++GI ++ +RA
Sbjct: 1 MHIKSIHLDGFKSYQKHTDILDFSPTFNAITGYNGSGKSNILDSICFIMGINKLDNIRAK 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSN-----TRY 114
++ ELI G TKA V + FDN+DK+ P G E+ + IV+ R I+ + T Y
Sbjct: 61 SMHELISHGG----TKAIVQVRFDNTDKRCSPFGMEHLDEIVVQRIITAQATGKGCATSY 116
Query: 115 MINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+NG + ++ D F V LNVNNPHFLIMQGR+T VLNMKP E
Sbjct: 117 TLNGHAATNGKMQDFFRGVGLNVNNPHFLIMQGRITTVLNMKPEE 161
>UNIPROTKB|Q09591 [details] [associations]
symbol:mix-1 "Mitotic chromosome and
X-chromosome-associated protein mix-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0009792
GO:GO:0000775 GO:GO:0051301 GO:GO:0002119 GO:GO:0040039
GO:GO:0000793 GO:GO:0007076 EMBL:Z46935 GO:GO:0042464
eggNOG:COG1196 GO:GO:0046536 SUPFAM:SSF75553 EMBL:U96387 PIR:T23744
PIR:T23981 RefSeq:NP_496331.1 UniGene:Cel.8608
ProteinModelPortal:Q09591 SMR:Q09591 IntAct:Q09591 STRING:Q09591
PaxDb:Q09591 EnsemblMetazoa:M106.1 GeneID:174669
KEGG:cel:CELE_M106.1 UCSC:M106.1 CTD:174669 WormBase:M106.1
GeneTree:ENSGT00550000074857 HOGENOM:HOG000016791 InParanoid:Q09591
KO:K06674 OMA:KSYQKHT NextBio:884988 PANTHER:PTHR18937:SF9
Uniprot:Q09591
Length = 1244
Score = 396 (144.5 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 85/165 (51%), Positives = 109/165 (66%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGI-QVKQVRAN 59
M+IKS+ LDGFKSY +I DF FNAITG NG+GKSNILD ICF++GI ++ +RA
Sbjct: 1 MHIKSIHLDGFKSYQKHTDILDFSPTFNAITGYNGSGKSNILDSICFIMGINKLDNIRAK 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSN-----TRY 114
++ ELI G TKA V + FDN+DK+ P G E+ + IV+ R I+ + T Y
Sbjct: 61 SMHELISHGG----TKAIVQVRFDNTDKRCSPFGMEHLDEIVVQRIITAQATGKGCATSY 116
Query: 115 MINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+NG + ++ D F V LNVNNPHFLIMQGR+T VLNMKP E
Sbjct: 117 TLNGHAATNGKMQDFFRGVGLNVNNPHFLIMQGRITTVLNMKPEE 161
>ASPGD|ASPL0000008486 [details] [associations]
symbol:sudA species:162425 "Emericella nidulans"
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0000785
"chromatin" evidence=ISS] [GO:0007067 "mitosis" evidence=IGI;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008278
"cohesin complex" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0051301 GO:GO:0007067
EMBL:AACD01000107 EMBL:BN001301 GO:GO:0051276 eggNOG:COG1196
SUPFAM:SSF75553 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
OrthoDB:EOG4TB7KF EMBL:U40146 PIR:S65799 RefSeq:XP_663968.1
ProteinModelPortal:Q00737 STRING:Q00737 GeneID:2871258
KEGG:ani:AN6364.2 Uniprot:Q00737
Length = 1215
Score = 230 (86.0 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 53/159 (33%), Positives = 83/159 (52%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MY+K +++ GFKSY + I F + N I G NG+GKSN I FVL +
Sbjct: 1 MYVKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLSDAYTHLGREE 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
Q L+++ + V A V + FDNSD++ P G +V+ R I + + Y ++ +
Sbjct: 61 RQALLHEGSGSAVMSAYVEIIFDNSDER-FPTGKPE---LVLRRTIGLKKD-EYTLDRKN 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V +L S + +NP++++ QGRVT + NMK E
Sbjct: 116 ATKNDVMNLLESAGFSRSNPYYIVPQGRVTALTNMKDSE 154
>FB|FBgn0015615 [details] [associations]
symbol:Cap "Chromosome-associated protein" species:7227
"Drosophila melanogaster" [GO:0008278 "cohesin complex"
evidence=ISS;NAS] [GO:0007062 "sister chromatid cohesion"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0001737 "establishment of imaginal
disc-derived wing hair orientation" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0022008 GO:GO:0046331
GO:GO:0051276 GO:GO:0001737 GO:GO:0008278 eggNOG:COG1196
SUPFAM:SSF75553 HSSP:Q9X0R4 EMBL:U30492 PIR:S70553
ProteinModelPortal:Q24098 SMR:Q24098 STRING:Q24098 PaxDb:Q24098
PRIDE:Q24098 FlyBase:FBgn0015615 InParanoid:Q24098
OrthoDB:EOG4KKWHV ArrayExpress:Q24098 Bgee:Q24098 Uniprot:Q24098
Length = 1231
Score = 224 (83.9 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 48/152 (31%), Positives = 80/152 (52%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
M+IK +++ GFKSY + + FD+ N + G NG+GKSN I FVL + +R
Sbjct: 32 MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQ 91
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
Q L+++ A V A V + FDNSD + PI E + R++ +Y +N
Sbjct: 92 RQSLLHEGTGARVISAYVEIIFDNSDNR-VPIDKEE----IFLRRVIGAKKDQYFLNKKV 146
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 147 VPRNEVVNLLESAGFSSSNPYYIVKQGKINQM 178
>UNIPROTKB|Q10970 [details] [associations]
symbol:smc "Chromosome partition protein Smc" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 GO:GO:0005694 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:BX842581 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K03529
TIGRFAMs:TIGR02168 EMBL:AJ414609 PIR:B70748 RefSeq:NP_217438.2
RefSeq:NP_337503.1 RefSeq:YP_006516375.1 ProteinModelPortal:Q10970
SMR:Q10970 PhosSite:P12071629 PRIDE:Q10970
EnsemblBacteria:EBMYCT00000000305 EnsemblBacteria:EBMYCT00000069167
GeneID:13317715 GeneID:887179 GeneID:925284 KEGG:mtc:MT2990
KEGG:mtu:Rv2922c KEGG:mtv:RVBD_2922c PATRIC:18128344
TubercuList:Rv2922c HOGENOM:HOG000036389 OMA:GDITKFI
ProtClustDB:CLSK881165 Uniprot:Q10970
Length = 1205
Score = 221 (82.9 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 52/162 (32%), Positives = 90/162 (55%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
MY+KS+ L GFKS+ + F+ A+ G NG+GKSN++D + +V+G Q K +R
Sbjct: 1 MYLKSLTLKGFKSFAAPTTLR-FEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGG 59
Query: 60 TLQELIYK--NGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
++++I+ + +A + +A VT++ DNSD PI Y + I R++ + Y IN
Sbjct: 60 KMEDVIFAGTSSRAPLGRAEVTVSIDNSDNA-LPIEYTE---VSITRRMFRDGASEYEIN 115
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
GSS V +L S + H ++ QG++ ++L +P +
Sbjct: 116 GSSCRLMDVQELLSDSGIG-REMHVIVGQGKLEEILQSRPED 156
>TAIR|locus:2045159 [details] [associations]
symbol:TTN7 "AT2G27170" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0007059 "chromosome
segregation" evidence=ISS;IMP] [GO:0008278 "cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 EMBL:CP002685 GO:GO:0005819 GO:GO:0000785
GO:GO:0003682 HSSP:P01096 GO:GO:0016363 EMBL:AC007154 EMBL:AC007290
GO:GO:0008278 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
PROSITE:PS51131 EMBL:AJ504805 EMBL:AY525642 EMBL:AK220965
EMBL:AK221283 EMBL:AK226305 EMBL:AK229499 IPI:IPI00549149
PIR:F84669 RefSeq:NP_001077968.1 RefSeq:NP_180285.4
UniGene:At.28786 ProteinModelPortal:Q56YN8 SMR:Q56YN8 STRING:Q56YN8
PRIDE:Q56YN8 EnsemblPlants:AT2G27170.1 EnsemblPlants:AT2G27170.2
GeneID:817259 KEGG:ath:AT2G27170 TAIR:At2g27170
HOGENOM:HOG000166512 InParanoid:Q56YN8 KO:K06669 OMA:NKVLEHF
PhylomeDB:Q56YN8 ProtClustDB:CLSN2692426 Genevestigator:Q56YN8
Uniprot:Q56YN8
Length = 1204
Score = 220 (82.5 bits), Expect = 9.7e-17, P = 9.7e-17
Identities = 48/159 (30%), Positives = 83/159 (52%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
M+IK ++++GFKSY +V +F + N + G NG+GKSN I FVL + +R+
Sbjct: 1 MFIKQVIIEGFKSYKEQVATEEFSNKVNCVVGANGSGKSNFFHAIRFVLSDIYQNLRSED 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + P+ E I + R + + + Y ++G
Sbjct: 61 RHALLHEGAGHQVVSAFVEIVFDNSDNR-FPVDKEE---IRLRRTVGLKKDD-YFLDGKH 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ V +L S + NP++++ QG++ + MK E
Sbjct: 116 ITKGEVMNLLESAGFSRANPYYVVQQGKIASLTLMKDIE 154
>WB|WBGene00004874 [details] [associations]
symbol:smc-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0051301 "cell
division" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0007276
"gamete generation" evidence=IMP] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0000775 GO:GO:0002119
GO:GO:0006281 GO:GO:0000910 GO:GO:0000070 GO:GO:0006310
GO:GO:0040035 GO:GO:0040039 GO:GO:0030261 GO:GO:0000793
GO:GO:0007276 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 EMBL:Z46242
PIR:T21809 RefSeq:NP_497935.1 ProteinModelPortal:Q20060 SMR:Q20060
IntAct:Q20060 STRING:Q20060 PaxDb:Q20060 EnsemblMetazoa:F35G12.8
GeneID:175603 KEGG:cel:CELE_F35G12.8 UCSC:F35G12.8 CTD:175603
WormBase:F35G12.8 HOGENOM:HOG000021360 InParanoid:Q20060
OMA:IAIEFLT NextBio:888868 Uniprot:Q20060
Length = 1549
Score = 221 (82.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 49/159 (30%), Positives = 84/159 (52%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I+++ +D FKSY + I F + F +I G NG+GKSN++D + FV G + ++R+
Sbjct: 90 LMIRNVEVDNFKSYFGKASIGPFHKSFTSIIGPNGSGKSNLIDSLLFVFGFRASKIRSAK 149
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYE--NDNTIVICRQISIPSNTRYMING 118
+ LI+K+ K +VT+ F + P YE D+ I R +++ Y I+G
Sbjct: 150 VSNLIHKSAGRNPDKCTVTIHFQRI--VDIPGHYEVVKDSEFTISRTAFQNNSSSYAIDG 207
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
V V++++ + FLI+QG V ++ MKP
Sbjct: 208 RPATKNEVEARLRRVDIDIEHNRFLILQGEVEQIAMMKP 246
>UNIPROTKB|Q20060 [details] [associations]
symbol:smc-4 "Structural maintenance of chromosomes protein
4" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0000775 GO:GO:0002119
GO:GO:0006281 GO:GO:0000910 GO:GO:0000070 GO:GO:0006310
GO:GO:0040035 GO:GO:0040039 GO:GO:0030261 GO:GO:0000793
GO:GO:0007276 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 EMBL:Z46242
PIR:T21809 RefSeq:NP_497935.1 ProteinModelPortal:Q20060 SMR:Q20060
IntAct:Q20060 STRING:Q20060 PaxDb:Q20060 EnsemblMetazoa:F35G12.8
GeneID:175603 KEGG:cel:CELE_F35G12.8 UCSC:F35G12.8 CTD:175603
WormBase:F35G12.8 HOGENOM:HOG000021360 InParanoid:Q20060
OMA:IAIEFLT NextBio:888868 Uniprot:Q20060
Length = 1549
Score = 221 (82.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 49/159 (30%), Positives = 84/159 (52%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I+++ +D FKSY + I F + F +I G NG+GKSN++D + FV G + ++R+
Sbjct: 90 LMIRNVEVDNFKSYFGKASIGPFHKSFTSIIGPNGSGKSNLIDSLLFVFGFRASKIRSAK 149
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYE--NDNTIVICRQISIPSNTRYMING 118
+ LI+K+ K +VT+ F + P YE D+ I R +++ Y I+G
Sbjct: 150 VSNLIHKSAGRNPDKCTVTIHFQRI--VDIPGHYEVVKDSEFTISRTAFQNNSSSYAIDG 207
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
V V++++ + FLI+QG V ++ MKP
Sbjct: 208 RPATKNEVEARLRRVDIDIEHNRFLILQGEVEQIAMMKP 246
>UNIPROTKB|Q81ZL2 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K03529 TIGRFAMs:TIGR02168 EMBL:AJ543641 RefSeq:NP_819572.1
HSSP:Q9X0R4 ProteinModelPortal:Q81ZL2 PRIDE:Q81ZL2 GeneID:1208425
KEGG:cbu:CBU_0540 PATRIC:17929777 HOGENOM:HOG000036391 OMA:WARISKL
ProtClustDB:CLSK914134 BioCyc:CBUR227377:GJ7S-543-MONOMER
Uniprot:Q81ZL2
Length = 1169
Score = 218 (81.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 58/167 (34%), Positives = 91/167 (54%)
Query: 1 MYIKSMVLDGFKSY--GTRVEINDFDREFNAITGLNGTGKSNILDGICFVLG-IQVKQVR 57
MY+K++ L GFKS+ T + I NAI G NG GKSN++D + +V+G KQ+R
Sbjct: 1 MYLKTIKLAGFKSFVDPTLIPIRG---SMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLR 57
Query: 58 ANTLQELIYKNGQAG---VTKASVTLTFDNSDKKNCPIG--YENDNTIVICRQISIPSNT 112
++ ++I+ NG V KAS+ L FDNS+ + IG Y I I R++ +
Sbjct: 58 GQSMSDVIF-NGTTSRKPVGKASIELHFDNSEGR---IGGEYAKYGEIAIRREVERDGQS 113
Query: 113 RYMINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
Y ING+ V + V D+F L + + ++ QG ++ ++ KP E
Sbjct: 114 NYFINGAHVRRRDVVDVFLGTGLGPRS-YAIVEQGMISNLIEAKPEE 159
>TIGR_CMR|CBU_0540 [details] [associations]
symbol:CBU_0540 "SMC family protein" species:227377
"Coxiella burnetii RSA 493" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K03529 TIGRFAMs:TIGR02168 EMBL:AJ543641 RefSeq:NP_819572.1
HSSP:Q9X0R4 ProteinModelPortal:Q81ZL2 PRIDE:Q81ZL2 GeneID:1208425
KEGG:cbu:CBU_0540 PATRIC:17929777 HOGENOM:HOG000036391 OMA:WARISKL
ProtClustDB:CLSK914134 BioCyc:CBUR227377:GJ7S-543-MONOMER
Uniprot:Q81ZL2
Length = 1169
Score = 218 (81.8 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 58/167 (34%), Positives = 91/167 (54%)
Query: 1 MYIKSMVLDGFKSY--GTRVEINDFDREFNAITGLNGTGKSNILDGICFVLG-IQVKQVR 57
MY+K++ L GFKS+ T + I NAI G NG GKSN++D + +V+G KQ+R
Sbjct: 1 MYLKTIKLAGFKSFVDPTLIPIRG---SMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLR 57
Query: 58 ANTLQELIYKNGQAG---VTKASVTLTFDNSDKKNCPIG--YENDNTIVICRQISIPSNT 112
++ ++I+ NG V KAS+ L FDNS+ + IG Y I I R++ +
Sbjct: 58 GQSMSDVIF-NGTTSRKPVGKASIELHFDNSEGR---IGGEYAKYGEIAIRREVERDGQS 113
Query: 113 RYMINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
Y ING+ V + V D+F L + + ++ QG ++ ++ KP E
Sbjct: 114 NYFINGAHVRRRDVVDVFLGTGLGPRS-YAIVEQGMISNLIEAKPEE 159
>TIGR_CMR|BA_3986 [details] [associations]
symbol:BA_3986 "chromosome segregation SMC protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
OMA:CQNGKIP HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 RefSeq:NP_846228.1 RefSeq:YP_020625.1
RefSeq:YP_029950.1 ProteinModelPortal:Q81WI9 IntAct:Q81WI9
DNASU:1086762 EnsemblBacteria:EBBACT00000012710
EnsemblBacteria:EBBACT00000015269 EnsemblBacteria:EBBACT00000024406
GeneID:1086762 GeneID:2817444 GeneID:2848221 KEGG:ban:BA_3986
KEGG:bar:GBAA_3986 KEGG:bat:BAS3699 ProtClustDB:CLSK873325
BioCyc:BANT260799:GJAJ-3757-MONOMER
BioCyc:BANT261594:GJ7F-3874-MONOMER Uniprot:Q81WI9
Length = 1189
Score = 217 (81.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 54/162 (33%), Positives = 88/162 (54%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
M++K + + GFKS+ RV + DF ++ G NG+GKSNI D I +VLG Q K +R
Sbjct: 1 MFLKRLEIAGFKSFAERVSV-DFVPGVTSVVGPNGSGKSNITDAIRWVLGEQSAKSLRGA 59
Query: 60 TLQELIYKNGQA--GVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
++++I+ V A VT+T +N D++ PI Y N + + R++S ++ + IN
Sbjct: 60 KMEDIIFAGSDTRRAVNVAEVTITLNNEDQR-LPIEY---NEVCVTRRVSRSGDSDFYIN 115
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
S K + DLF + +I QG+V ++L+ K E
Sbjct: 116 KQSCRLKDIIDLFMDSGMG-REAFSIISQGKVEEILSSKSEE 156
>CGD|CAL0004031 [details] [associations]
symbol:SMC3 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0030437 "ascospore formation" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0007064 "mitotic sister chromatid cohesion" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
EMBL:AACQ01000026 SUPFAM:SSF75553 KO:K06669 RefSeq:XP_720093.1
ProteinModelPortal:Q5AEZ0 STRING:Q5AEZ0 GeneID:3638190
KEGG:cal:CaO19.7895 CGD:CAL0062457 Uniprot:Q5AEZ0
Length = 1240
Score = 216 (81.1 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 53/159 (33%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
M+IK +++ GFK+Y I+ N + G NG+GKSN I FVL +
Sbjct: 1 MHIKKIIIQGFKTYKNTTTIDLLSPHCNVVVGRNGSGKSNFFAAIRFVLSDAYTHMSREE 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
Q LI++ G V A V + FDN+D + PI N I I R I + + Y ++G S
Sbjct: 61 RQGLIHE-GSGTVMSAYVEIIFDNTDGR-FPI---NKPEISIRRTIGLKKDD-YSLDGKS 114
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ +L S + +NP++++ QGR+T + N K HE
Sbjct: 115 ATRSDIMNLLESAGFSRSNPYYIVPQGRITSLTNSKNHE 153
>CGD|CAL0003745 [details] [associations]
symbol:SMC4 species:5476 "Candida albicans" [GO:0032116 "SMC
loading complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000939 "condensed chromosome inner kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000799
"nuclear condensin complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0003745
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:AACQ01000063
EMBL:AACQ01000062 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 RefSeq:XP_716802.1 RefSeq:XP_716862.1
ProteinModelPortal:Q5A4Y2 STRING:Q5A4Y2 GeneID:3641522
GeneID:3641578 KEGG:cal:CaO19.8579 KEGG:cal:CaO19.964
Uniprot:Q5A4Y2
Length = 1368
Score = 215 (80.7 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 50/160 (31%), Positives = 83/160 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +VL FKSY + I F F+A+ G NG+GKSN++D + FV G + ++R
Sbjct: 147 LVIDRLVLTDFKSYAGKKVIGPFHSSFSAVVGPNGSGKSNVIDSMLFVFGFRASKMRQGK 206
Query: 61 LQELIYKNGQAGVTKASVTLTFDNS-DKKNCPIGYE--NDNTIVICRQISIPSNTRYMIN 117
L ELI+ +G V + F D P + D+ ++I R+ + + Y IN
Sbjct: 207 LSELIHNSGDQRPDYCQVDIHFQMVVDDLVVPQKADVVPDSELIISRKAFRNNQSSYYIN 266
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
G + + V+ L + +++++ FLI+QG V + MKP
Sbjct: 267 GKTSSYSEVTTLLKNKGIDLDHKRFLILQGEVESIAQMKP 306
>POMBASE|SPBC146.03c [details] [associations]
symbol:cut3 "condensin complex subunit Cut3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IMP] [GO:0034613
"cellular protein localization" evidence=IMP] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBC146.03c Pfam:PF02463 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0034613 GO:GO:0051301
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 EMBL:D30788
EMBL:AB027959 PIR:S51622 RefSeq:NP_595392.1
ProteinModelPortal:P41004 DIP:DIP-35048N IntAct:P41004
STRING:P41004 EnsemblFungi:SPBC146.03c.1 GeneID:2539817
KEGG:spo:SPBC146.03c OrthoDB:EOG4WM82V NextBio:20800966
Uniprot:P41004
Length = 1324
Score = 213 (80.0 bits), Expect = 6.1e-16, P = 6.1e-16
Identities = 49/160 (30%), Positives = 87/160 (54%)
Query: 1 MYIKSMVLDGFKSY-GTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRAN 59
+ + + L FKSY GT++ + F F++I G NG+GKSN++D + FV G + ++R +
Sbjct: 124 LVVYELRLTNFKSYAGTQI-VGPFHPSFSSIVGPNGSGKSNVIDALLFVFGFRASKLRQS 182
Query: 60 TLQELIYKNG-QAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNT-RYMIN 117
LI+K+ + V +TF + N Y + + + + R+ + +NT +Y +N
Sbjct: 183 KASALIHKSATHPSLDSCDVEITFK---EVNSDFTYVDGSELTV-RRTAYKNNTSKYFVN 238
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
G + VS+L +++N+ FLI+QG V + MKP
Sbjct: 239 GVESSFSAVSNLLKEKGIDLNHKRFLILQGEVESIAQMKP 278
>SGD|S000004076 [details] [associations]
symbol:SMC4 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0007076 "mitotic chromosome
condensation" evidence=IMP;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IGI;IDA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0000799 "nuclear condensin complex" evidence=TAS;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0070058
"tRNA gene clustering" evidence=IMP] [GO:0032116 "SMC loading
complex" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
SGD:S000004076 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0003682 EMBL:BK006945
GO:GO:0016887 GO:GO:0006310 GO:GO:0007076 EMBL:U53880 GO:GO:0000799
GO:GO:0070058 EMBL:Z73259 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
HOGENOM:HOG000184777 OrthoDB:EOG4WM82V EMBL:Z73258 PIR:S64918
RefSeq:NP_013187.1 ProteinModelPortal:Q12267 SMR:Q12267
DIP:DIP-3007N IntAct:Q12267 MINT:MINT-436885 STRING:Q12267
PaxDb:Q12267 EnsemblFungi:YLR086W GeneID:850775 KEGG:sce:YLR086W
CYGD:YLR086w NextBio:966951 Genevestigator:Q12267
GermOnline:YLR086W Uniprot:Q12267
Length = 1418
Score = 213 (80.0 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 46/160 (28%), Positives = 88/160 (55%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
++I +VL+ FKSY + + F F+A+ G NG+GKSN++D + FV G + ++R +
Sbjct: 154 LFINELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVFGFRANKMRQDR 213
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNT-IVICRQISIPSNTRYMIN 117
L +LI+K+ + SV + F D+ + + + ++I R+ ++++Y IN
Sbjct: 214 LSDLIHKSEAFPSLQSCSVAVHFQYVIDESSGTSRIDEEKPGLIITRKAFKNNSSKYYIN 273
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
+ V+ L + +++++ FLI+QG V + MKP
Sbjct: 274 EKESSYTEVTKLLKNEGIDLDHKRFLILQGEVENIAQMKP 313
>POMBASE|SPAC10F6.09c [details] [associations]
symbol:psm3 "mitotic cohesin complex subunit Psm3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000794 "condensed nuclear chromosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005694 "chromosome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0008278 "cohesin complex" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISM] [GO:0030892 "mitotic cohesin
complex" evidence=NAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 PomBase:SPAC10F6.09c Pfam:PF02463
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0016567 GO:GO:0000790
GO:GO:0000794 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030892 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF PIR:T37503
RefSeq:NP_593260.1 ProteinModelPortal:O42649 IntAct:O42649
STRING:O42649 EnsemblFungi:SPAC10F6.09c.1 GeneID:2543010
KEGG:spo:SPAC10F6.09c OrthoDB:EOG4TB7KF NextBio:20804043
Uniprot:O42649
Length = 1194
Score = 212 (79.7 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 53/159 (33%), Positives = 80/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYI +V+ GFKSY I N I G NG+GKSN I FVL +
Sbjct: 1 MYITKIVIQGFKSYKDYTVIEPLSPHHNVIVGRNGSGKSNFFAAIRFVLSDAYTHLSREE 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
Q L+++ A V A V +TF N+D + P G + +V+ R I + + Y ++ +
Sbjct: 61 RQALLHEGPGATVMSAYVEVTFANADNR-FPTG---KSEVVLRRTIGLKKD-EYSLDKKT 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V+ V +L S + +NP++++ QGRVT + N K E
Sbjct: 116 VSKTEVINLLESAGFSRSNPYYIVPQGRVTSLTNAKDSE 154
>WB|WBGene00001086 [details] [associations]
symbol:dpy-27 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IMP]
[GO:0042464 "dosage compensation by hypoactivation of X chromosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0000228
"nuclear chromosome" evidence=IDA] [GO:0000805 "X chromosome"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046536 "dosage compensation complex"
evidence=IPI] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0043565 GO:GO:0006281
GO:GO:0016358 GO:GO:0010171 GO:GO:0040011 GO:GO:0006310
GO:GO:0030261 EMBL:Z35602 GO:GO:0000228 GO:GO:0000805 GO:GO:0042464
GO:GO:0007062 EMBL:L35274 PIR:T24216 RefSeq:NP_497771.1
ProteinModelPortal:P48996 SMR:P48996 IntAct:P48996 STRING:P48996
PaxDb:P48996 PRIDE:P48996 EnsemblMetazoa:R13G10.1 GeneID:175492
KEGG:cel:CELE_R13G10.1 UCSC:R13G10.1 CTD:175492 WormBase:R13G10.1
eggNOG:COG1196 GeneTree:ENSGT00580000081617 HOGENOM:HOG000021811
InParanoid:P48996 KO:K06675 OMA:FHKNLTM NextBio:888386
GO:GO:0046536 SUPFAM:SSF75553 Uniprot:P48996
Length = 1469
Score = 213 (80.0 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
M I ++ ++ FKSY + + F + I G NG+GKSN++D + FV G + ++R
Sbjct: 91 MIILNIYVENFKSYAGKHILGPFHKNLTMILGPNGSGKSNVIDALLFVFGFKAGKIRTKK 150
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIG----YE--NDNTIVICRQISIPSNTRY 114
L LI G SVT+ F K+ P+ YE DN + I R I+ +N++Y
Sbjct: 151 LSALINSGGN--YESCSVTIMFQMV--KDMPVENYDKYEVLTDNCVCITRTINRENNSKY 206
Query: 115 MINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
I+ + K V +L +++ + FLI+QG V + MKP
Sbjct: 207 RIDDKDASQKDVQELLLRAGIDMTHNRFLILQGEVEAIALMKP 249
>UNIPROTKB|P48996 [details] [associations]
symbol:dpy-27 "Chromosome condensation protein dpy-27"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0043565 GO:GO:0006281
GO:GO:0016358 GO:GO:0010171 GO:GO:0040011 GO:GO:0006310
GO:GO:0030261 EMBL:Z35602 GO:GO:0000228 GO:GO:0000805 GO:GO:0042464
GO:GO:0007062 EMBL:L35274 PIR:T24216 RefSeq:NP_497771.1
ProteinModelPortal:P48996 SMR:P48996 IntAct:P48996 STRING:P48996
PaxDb:P48996 PRIDE:P48996 EnsemblMetazoa:R13G10.1 GeneID:175492
KEGG:cel:CELE_R13G10.1 UCSC:R13G10.1 CTD:175492 WormBase:R13G10.1
eggNOG:COG1196 GeneTree:ENSGT00580000081617 HOGENOM:HOG000021811
InParanoid:P48996 KO:K06675 OMA:FHKNLTM NextBio:888386
GO:GO:0046536 SUPFAM:SSF75553 Uniprot:P48996
Length = 1469
Score = 213 (80.0 bits), Expect = 7.0e-16, P = 7.0e-16
Identities = 52/163 (31%), Positives = 83/163 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
M I ++ ++ FKSY + + F + I G NG+GKSN++D + FV G + ++R
Sbjct: 91 MIILNIYVENFKSYAGKHILGPFHKNLTMILGPNGSGKSNVIDALLFVFGFKAGKIRTKK 150
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIG----YE--NDNTIVICRQISIPSNTRY 114
L LI G SVT+ F K+ P+ YE DN + I R I+ +N++Y
Sbjct: 151 LSALINSGGN--YESCSVTIMFQMV--KDMPVENYDKYEVLTDNCVCITRTINRENNSKY 206
Query: 115 MINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
I+ + K V +L +++ + FLI+QG V + MKP
Sbjct: 207 RIDDKDASQKDVQELLLRAGIDMTHNRFLILQGEVEAIALMKP 249
>FB|FBgn0015391 [details] [associations]
symbol:glu "gluon" species:7227 "Drosophila melanogaster"
[GO:0007076 "mitotic chromosome condensation" evidence=ISS;NAS;IMP]
[GO:0000796 "condensin complex" evidence=ISS;NAS;TAS] [GO:0000166
"nucleotide binding" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0007422 "peripheral nervous system development"
evidence=TAS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000785 "chromatin" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0005694 "chromosome"
evidence=IDA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISS;NAS;IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0000819 "sister chromatid segregation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0007052
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 GO:GO:0007422
GO:GO:0000785 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 SUPFAM:SSF75553 HSSP:Q9X0R4 FlyBase:FBgn0015391
EMBL:AF185287 ProteinModelPortal:Q9U6I2 STRING:Q9U6I2 PRIDE:Q9U6I2
InParanoid:Q9U6I2 ArrayExpress:Q9U6I2 Bgee:Q9U6I2 Uniprot:Q9U6I2
Length = 1409
Score = 210 (79.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY VE+ F + F AI G NG+GKSN++D + FV G + ++R
Sbjct: 87 LIISKIVNRNFKSYAGEVELGPFHQSFTAIIGPNGSGKSNVIDSMMFVFGCRANRIRCKR 146
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
+ LI+ + + SV + F DK + D++IVI R +++ Y IN
Sbjct: 147 VSTLIHSSSSYPNLRSCSVAVHFKQIVDKGDGTCEDVPDSSIVIERTAMSDNSSYYQIND 206
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V+ L ++++ + FLI+QG V + MKP
Sbjct: 207 KRAQLKDVAKLLKKHHVDLEHNRFLILQGEVESIAMMKP 245
>DICTYBASE|DDB_G0286403 [details] [associations]
symbol:smc4 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0007076 "mitotic chromosome condensation" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000796 "condensin complex" evidence=ISS] [GO:0000070 "mitotic
sister chromatid segregation" evidence=ISS] [GO:0051301 "cell
division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0286403 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0046982 EMBL:AAFI02000085 GO:GO:0007076
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 HSSP:P32908 RefSeq:XP_637730.1
ProteinModelPortal:Q54LV0 STRING:Q54LV0 EnsemblProtists:DDB0219935
GeneID:8625595 KEGG:ddi:DDB_G0286403 OMA:QENFDEN Uniprot:Q54LV0
Length = 1415
Score = 210 (79.0 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 49/165 (29%), Positives = 83/165 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I MV++ FKSY E+ F + F+++ G NG+GKSN++D + FV G + KQ+R N
Sbjct: 158 LMITKMVMENFKSYAGAQEVGPFHKCFSSVVGPNGSGKSNVIDAMLFVFGYRAKQIRLNK 217
Query: 61 LQELIYKN-GQAGVTKASVTLTFDNSDKKNCPIGYE--NDNTIVICRQISIPSN-----T 112
+ ELI+ + +T V++ F YE + V+ R N +
Sbjct: 218 ISELIHNSENHKNLTNGRVSVHFQEIIDLPGEDNYEVVKGSEFVVTRTAQKTGNNKDGVS 277
Query: 113 RYMINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
+Y +N V + + ++++N FLI+QG V ++ MKP
Sbjct: 278 KYYLNDKVVKLDDLKTILKDKGIDLDNNRFLILQGEVEQIAMMKP 322
>SGD|S000003610 [details] [associations]
symbol:SMC3 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0007130 "synaptonemal
complex assembly" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IMP] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 SGD:S000003610 Pfam:PF02463
GO:GO:0005524 GO:GO:0051301 EMBL:BK006943 GO:GO:0016887 EMBL:X88851
GO:GO:0030437 GO:GO:0007131 GO:GO:0007130 GO:GO:0007064
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0051177 GO:GO:0034990
HOGENOM:HOG000166512 KO:K06669 GeneTree:ENSGT00580000081628
OrthoDB:EOG4TB7KF EMBL:Y14278 EMBL:Z49349 PIR:S56850
RefSeq:NP_012461.1 ProteinModelPortal:P47037 SMR:P47037
DIP:DIP-2991N IntAct:P47037 MINT:MINT-435389 STRING:P47037
PaxDb:P47037 PeptideAtlas:P47037 EnsemblFungi:YJL074C GeneID:853371
KEGG:sce:YJL074C CYGD:YJL074c OMA:NIRMENI NextBio:973810
Genevestigator:P47037 GermOnline:YJL074C Uniprot:P47037
Length = 1230
Score = 207 (77.9 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 48/162 (29%), Positives = 79/162 (48%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GFK+Y I++F N I G NG+GKSN I FVL ++
Sbjct: 1 MYIKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVLSDDYSNLKREE 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNC-PIGY--ENDNTIVICRQISIPSNTRYMIN 117
Q LI++ V ASV + F + D P G D+ + I R + + + Y +N
Sbjct: 61 RQGLIHQGSGGSVMSASVEIVFHDPDHSMILPSGVLSRGDDEVTIRRTVGLKKDD-YQLN 119
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+V + + + ++NNP+ ++ QG++ + N K E
Sbjct: 120 DRNVTKGDIVRMLETAGFSMNNPYNIVPQGKIVALTNAKDKE 161
>RGD|62006 [details] [associations]
symbol:Smc3 "structural maintenance of chromosomes 3"
species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=ISO;ISS] [GO:0000800 "lateral element" evidence=ISO]
[GO:0000922 "spindle pole" evidence=ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=ISO;ISS] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007067 "mitosis" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO;ISS] [GO:0007165 "signal transduction"
evidence=ISO;ISS] [GO:0016363 "nuclear matrix" evidence=ISO;ISS]
[GO:0019827 "stem cell maintenance" evidence=ISO] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0034991
"nuclear meiotic cohesin complex" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0045502 "dynein
binding" evidence=ISO;ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:62006 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0006275 GO:GO:0006281 GO:GO:0000785 GO:GO:0016363
GO:GO:0005604 GO:GO:0000922 GO:GO:0051276 GO:GO:0045502
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
HOVERGEN:HBG039849 EMBL:U82626 IPI:IPI00201289 UniGene:Rn.11074
ProteinModelPortal:P97690 STRING:P97690 PhosphoSite:P97690
PRIDE:P97690 UCSC:RGD:62006 ArrayExpress:P97690
Genevestigator:P97690 GermOnline:ENSRNOG00000014173 Uniprot:P97690
Length = 1191
Score = 203 (76.5 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|P97690 [details] [associations]
symbol:Smc3 "Structural maintenance of chromosomes protein
3" species:10116 "Rattus norvegicus" [GO:0051276 "chromosome
organization" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 RGD:62006
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0051301 GO:GO:0007067 GO:GO:0007052 GO:GO:0006275
GO:GO:0006281 GO:GO:0000785 GO:GO:0016363 GO:GO:0005604
GO:GO:0000922 GO:GO:0051276 GO:GO:0045502 eggNOG:COG1196
SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
HOVERGEN:HBG039849 EMBL:U82626 IPI:IPI00201289 UniGene:Rn.11074
ProteinModelPortal:P97690 STRING:P97690 PhosphoSite:P97690
PRIDE:P97690 UCSC:RGD:62006 ArrayExpress:P97690
Genevestigator:P97690 GermOnline:ENSRNOG00000014173 Uniprot:P97690
Length = 1191
Score = 203 (76.5 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|O93309 [details] [associations]
symbol:smc3 "Structural maintenance of chromosomes protein
3" species:8355 "Xenopus laevis" [GO:0000785 "chromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=ISS]
[GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000775 GO:GO:0051301 GO:GO:0007067 GO:GO:0006275
GO:GO:0006281 GO:GO:0000785 GO:GO:0051276 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039849 EMBL:BC094474 EMBL:AF051785
UniGene:Xl.290 UniGene:Xl.75355 ProteinModelPortal:O93309
IntAct:O93309 Uniprot:O93309
Length = 1209
Score = 203 (76.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|G3N365 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
GeneTree:ENSGT00580000081628 EMBL:DAAA02059205
Ensembl:ENSBTAT00000063829 Uniprot:G3N365
Length = 1216
Score = 203 (76.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>ZFIN|ZDB-GENE-030131-3196 [details] [associations]
symbol:smc3 "structural maintenance of chromosomes
3" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-030131-3196 GO:GO:0005524 GO:GO:0005694 HSSP:P58301
GO:GO:0007064 SUPFAM:SSF75553 KO:K06669 CTD:9126 HOVERGEN:HBG039849
EMBL:BC044408 IPI:IPI00616384 RefSeq:NP_999854.1 UniGene:Dr.24937
ProteinModelPortal:Q803N2 STRING:Q803N2 PRIDE:Q803N2 GeneID:324475
KEGG:dre:324475 InParanoid:Q803N2 NextBio:20808789
ArrayExpress:Q803N2 Bgee:Q803N2 Uniprot:Q803N2
Length = 1216
Score = 203 (76.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTVVDPFGSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|A7Z065 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0007052 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 GO:GO:0030893 OMA:NKVLEHF IPI:IPI00698576
UniGene:Bt.5290 HOVERGEN:HBG039849 GeneTree:ENSGT00580000081628
EMBL:DAAA02059205 EMBL:BC153263 SMR:A7Z065 STRING:A7Z065
Ensembl:ENSBTAT00000046231 InParanoid:A7Z065 Uniprot:A7Z065
Length = 1217
Score = 203 (76.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|E2R7T4 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553 KO:K06669 OMA:NKVLEHF
CTD:9126 GeneTree:ENSGT00580000081628 EMBL:AAEX03015526
RefSeq:XP_851818.2 ProteinModelPortal:E2R7T4
Ensembl:ENSCAFT00000017137 GeneID:486886 KEGG:cfa:486886
Uniprot:E2R7T4
Length = 1217
Score = 203 (76.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|Q9UQE7 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0036033
"mediator complex binding" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007052 "mitotic spindle organization"
evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP;NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0008278 "cohesin complex"
evidence=NAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007165 "signal transduction" evidence=IDA]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0007126 "meiosis" evidence=IDA]
[GO:0006275 "regulation of DNA replication" evidence=IMP]
[GO:0000785 "chromatin" evidence=IDA] [GO:0030893 "meiotic cohesin
complex" evidence=IDA] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0007067 "mitosis" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007091 "metaphase/anaphase
transition of mitotic cell cycle" evidence=TAS] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0007165 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0000775 GO:GO:0051301 GO:GO:0007052
EMBL:CH471066 GO:GO:0006281 GO:GO:0000785 Reactome:REACT_111183
GO:GO:0016363 GO:GO:0005604 GO:GO:0000922 GO:GO:0003777
GO:GO:0032876 GO:GO:0007091 GO:GO:0000236 GO:GO:0045502
GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
Orphanet:199 GO:GO:0030893 EMBL:AL359260 HOGENOM:HOG000166512
KO:K06669 OMA:NKVLEHF CTD:9126 HOVERGEN:HBG039849 OrthoDB:EOG4B5P4C
EMBL:AF020043 EMBL:AK289771 EMBL:AF067163 EMBL:AJ005015
IPI:IPI00219420 RefSeq:NP_005436.1 UniGene:Hs.24485
ProteinModelPortal:Q9UQE7 SMR:Q9UQE7 DIP:DIP-29200N IntAct:Q9UQE7
MINT:MINT-3083875 STRING:Q9UQE7 PhosphoSite:Q9UQE7 DMDM:29337005
PaxDb:Q9UQE7 PRIDE:Q9UQE7 Ensembl:ENST00000361804 GeneID:9126
KEGG:hsa:9126 UCSC:uc001kze.3 GeneCards:GC10P112318 HGNC:HGNC:2468
HPA:HPA037411 MIM:606062 MIM:610759 neXtProt:NX_Q9UQE7
PharmGKB:PA26966 InParanoid:Q9UQE7 ChiTaRS:SMC3 GenomeRNAi:9126
NextBio:34209 Bgee:Q9UQE7 CleanEx:HS_SMC3 Genevestigator:Q9UQE7
GermOnline:ENSG00000108055 Uniprot:Q9UQE7
Length = 1217
Score = 203 (76.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|Q5R4K5 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9601 "Pongo abelii" [GO:0000785 "chromatin"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0006275 GO:GO:0006281 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 GO:GO:0030893 KO:K06669 OMA:NKVLEHF CTD:9126
HOVERGEN:HBG039849 GeneTree:ENSGT00580000081628 EMBL:CR861241
RefSeq:NP_001126947.1 UniGene:Pab.18502 ProteinModelPortal:Q5R4K5
SMR:Q5R4K5 PRIDE:Q5R4K5 Ensembl:ENSPPYT00000003185 GeneID:100173965
KEGG:pon:100173965 InParanoid:Q5R4K5 Uniprot:Q5R4K5
Length = 1217
Score = 203 (76.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>MGI|MGI:1339795 [details] [associations]
symbol:Smc3 "structural maintenance of chromosomes 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000785 "chromatin" evidence=ISO] [GO:0000800
"lateral element" evidence=IDA] [GO:0000922 "spindle pole"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006275 "regulation of DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0016363 "nuclear matrix" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0030893 "meiotic cohesin complex"
evidence=ISO;IDA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IDA] [GO:0036033 "mediator complex
binding" evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 MGI:MGI:1339795 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0005654 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0006275 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0016363 GO:GO:0005604 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0019827 GO:GO:0045502
GO:GO:0000800 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0036033
GO:GO:0034991 PDB:2WD5 PDBsum:2WD5 HOGENOM:HOG000166512 KO:K06669
OMA:NKVLEHF CTD:9126 HOVERGEN:HBG039849 OrthoDB:EOG4B5P4C
ChiTaRS:SMC3 EMBL:AF141294 EMBL:AF047601 EMBL:Y15128 EMBL:AK005647
IPI:IPI00132122 RefSeq:NP_031816.2 UniGene:Mm.14910
ProteinModelPortal:Q9CW03 SMR:Q9CW03 DIP:DIP-57028N IntAct:Q9CW03
STRING:Q9CW03 PhosphoSite:Q9CW03 PaxDb:Q9CW03 PRIDE:Q9CW03
Ensembl:ENSMUST00000025930 GeneID:13006 KEGG:mmu:13006
GeneTree:ENSGT00580000081628 InParanoid:Q9CW03
EvolutionaryTrace:Q9CW03 NextBio:282832 Bgee:Q9CW03 CleanEx:MM_SMC3
Genevestigator:Q9CW03 GermOnline:ENSMUSG00000024974 Uniprot:Q9CW03
Length = 1217
Score = 203 (76.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|D4A1B9 [details] [associations]
symbol:Smc3 "Structural maintenance of chromosomes protein
3" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0036033 "mediator complex
binding" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051276 "chromosome organization" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:62006 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0007052 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 EMBL:CH473986 GO:GO:0030893 KO:K06669 CTD:9126
OrthoDB:EOG4B5P4C GeneTree:ENSGT00580000081628 UniGene:Rn.11074
IPI:IPI00780283 RefSeq:NP_113771.2 SMR:D4A1B9
Ensembl:ENSRNOT00000019560 GeneID:29486 KEGG:rno:29486
NextBio:609354 Uniprot:D4A1B9
Length = 1217
Score = 203 (76.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|O97594 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=ISS] [GO:0006275
"regulation of DNA replication" evidence=ISS] [GO:0000922 "spindle
pole" evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0007052 "mitotic
spindle organization" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0045502 "dynein binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051276 "chromosome organization" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0006275 GO:GO:0006281 GO:GO:0000785
GO:GO:0016363 GO:GO:0000922 GO:GO:0051276 GO:GO:0045502
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
KO:K06669 EMBL:AF072713 IPI:IPI00698576 RefSeq:NP_776720.1
UniGene:Bt.5290 ProteinModelPortal:O97594 STRING:O97594
PRIDE:O97594 GeneID:281729 KEGG:bta:281729 CTD:9126
HOVERGEN:HBG039849 InParanoid:O97594 OrthoDB:EOG4B5P4C
NextBio:20805649 Uniprot:O97594
Length = 1218
Score = 203 (76.5 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +R
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 RLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKM 115
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 VTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|Q97QG7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 OMA:GDITKFI PIR:G95144 RefSeq:NP_345712.1
ProteinModelPortal:Q97QG7 EnsemblBacteria:EBSTRT00000025640
GeneID:931760 KEGG:spn:SP_1247 PATRIC:19706887
ProtClustDB:CLSK877065 Uniprot:Q97QG7
Length = 1179
Score = 201 (75.8 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 51/162 (31%), Positives = 85/162 (52%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLG-IQVKQVRAN 59
MY+K + + GFKS+ + ++ FD+ A+ G NG+GKSNI + + + LG VK +R
Sbjct: 1 MYLKEIEIQGFKSFADKTKVV-FDQGVTAVVGPNGSGKSNITESLRWALGESSVKSLRGG 59
Query: 60 TLQELIYKNGQAG--VTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
+ ++I+ ++ + ASV +T DN D G E I + R + ++ Y I+
Sbjct: 60 KMPDIIFAGTESRKPLNYASVVVTLDNHDGFIKDAGQE----IRVERHVYRSGDSEYKID 115
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
G V + + DLF L + +I QG+V ++ N KP E
Sbjct: 116 GKKVRLRDIHDLFLDTGLG-RDSFSIISQGKVEEIFNSKPEE 156
>UNIPROTKB|P51834 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:D64116 EMBL:D49781 PIR:G69708 RefSeq:NP_389476.2
ProteinModelPortal:P51834 SMR:P51834 IntAct:P51834
EnsemblBacteria:EBBACT00000001044 GeneID:938085 KEGG:bsu:BSU15940
PATRIC:18974993 GenoList:BSU15940 HOGENOM:HOG000036392 KO:K03529
ProtClustDB:CLSK2765274 BioCyc:BSUB:BSU15940-MONOMER
TIGRFAMs:TIGR02168 Uniprot:P51834
Length = 1186
Score = 201 (75.8 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 50/162 (30%), Positives = 86/162 (53%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
M++K + + GFKS+ R+ + DF + A+ G NG+GKSNI D I +VLG Q + +R
Sbjct: 1 MFLKRLDVIGFKSFAERISV-DFVKGVTAVVGPNGSGKSNITDAIRWVLGEQSARSLRGG 59
Query: 60 TLQELIY--KNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
++++I+ + + + A VTLT DN D PI + + + R++ + ++IN
Sbjct: 60 KMEDIIFAGSDSRKRLNLAEVTLTLDNDDHF-LPIDFHE---VSVTRRVYRSGESEFLIN 115
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
K + DLF L +I QG+V ++L+ K +
Sbjct: 116 NQPCRLKDIIDLFMDSGLG-KEAFSIISQGKVEEILSSKAED 156
>ZFIN|ZDB-GENE-020419-21 [details] [associations]
symbol:smc4 "structural maintenance of chromosomes
4" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-020419-21 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 CTD:10051 HOGENOM:HOG000184777 HOVERGEN:HBG106696
HSSP:Q9X0R4 EMBL:AY099521 IPI:IPI00504040 RefSeq:NP_775360.1
UniGene:Dr.77769 ProteinModelPortal:Q8JGS5 STRING:Q8JGS5
PRIDE:Q8JGS5 GeneID:192332 KEGG:dre:192332 InParanoid:Q8JGS5
NextBio:20797168 ArrayExpress:Q8JGS5 Bgee:Q8JGS5 Uniprot:Q8JGS5
Length = 1289
Score = 201 (75.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 47/159 (29%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 81 LMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 140
Query: 61 LQELIYKN-GQAGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + G + +V + F DK+ D++ + R +++ Y IN
Sbjct: 141 LSVLIHSSDGHPDIQSCTVEVHFQKIIDKEGDDYDVIPDSSFYVARTAGKDNSSAYYINT 200
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V L S +++++ FLI+QG V ++ MKP
Sbjct: 201 KKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQIAMMKP 239
>TIGR_CMR|SO_2898 [details] [associations]
symbol:SO_2898 "SMC family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0005524 "ATP binding"
evidence=ISS] [GO:0007059 "chromosome segregation" evidence=ISS]
[GO:0030261 "chromosome condensation" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR011890
PIRSF:PIRSF005719 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 KO:K03529 TIGRFAMs:TIGR02168 HSSP:Q9X0R4
HOGENOM:HOG000036391 RefSeq:NP_718470.1 ProteinModelPortal:Q7ZAJ7
GeneID:1170588 KEGG:son:SO_2898 PATRIC:23525438 OMA:ELYVEEK
ProtClustDB:CLSK906922 Uniprot:Q7ZAJ7
Length = 1145
Score = 200 (75.5 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 50/162 (30%), Positives = 87/162 (53%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLG-IQVKQVRAN 59
M +K + L GFKS+ +I F + +AI G NG GKSN++D + +VLG K +R +
Sbjct: 1 MRLKQIKLAGFKSFVDPTKI-PFLQALSAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGD 59
Query: 60 TLQELIYKNGQAG--VTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
++ ++I+ A V+ A V L F+N + + Y + I + RQ+S + Y +N
Sbjct: 60 SMSDVIFNGSSARKPVSVAGVELVFENKEGRLAG-QYASYEEISVKRQVSRDGESWYFLN 118
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
G K ++DLF L + + +I QG +++++ KP +
Sbjct: 119 GQKCRRKDITDLFMGTGLGPRS-YAIIEQGTISRLIESKPQD 159
>ASPGD|ASPL0000075987 [details] [associations]
symbol:AN4597 species:162425 "Emericella nidulans"
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006265 "DNA
topological change" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000939
"condensed chromosome inner kinetochore" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:BN001303
EMBL:AACD01000079 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 OrthoDB:EOG4WM82V
RefSeq:XP_662201.1 ProteinModelPortal:Q5B4D3 STRING:Q5B4D3
EnsemblFungi:CADANIAT00005839 GeneID:2872396 KEGG:ani:AN4597.2
Uniprot:Q5B4D3
Length = 1476
Score = 201 (75.8 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 45/161 (27%), Positives = 84/161 (52%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I ++VL+ FKSY + + F F+++ G NG+GKSN++D + FV G + ++R
Sbjct: 245 LMITTLVLNNFKSYAGKQVVGPFHASFSSVVGPNGSGKSNVIDALLFVFGFRASKMRQGK 304
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNSDKKNCPIGYEN---DNTIVICRQISIPSNTRYMI 116
+ LI+ + + V + F + + P G D+ ++I R+ + ++Y +
Sbjct: 305 ISALIHNSANHPNLPFCEVEVYFQ--EIIDLPGGEHEVVPDSQLIISRKAFKNNTSKYYM 362
Query: 117 NGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
NG N V+ L +++++ FLI+QG V + MKP
Sbjct: 363 NGKETNFTAVTTLLRDRGIDLDHKRFLILQGEVESIAQMKP 403
>WB|WBGene00004873 [details] [associations]
symbol:smc-3 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040002 "collagen and cuticulin-based cuticle
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0007109 "cytokinesis, completion of separation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0008278 "cohesin complex" evidence=IDA;IPI]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=NAS] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040010 GO:GO:0007059 GO:GO:0005819
GO:GO:0004674 GO:GO:0040011 GO:GO:0000790 GO:GO:0040035
GO:GO:0000794 GO:GO:0030261 GO:GO:0007109 GO:GO:0040002
GO:GO:0008278 EMBL:AL117202 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
GeneTree:ENSGT00580000081628 RefSeq:NP_001129842.1
ProteinModelPortal:B2FDA8 SMR:B2FDA8 STRING:B2FDA8 PaxDb:B2FDA8
EnsemblMetazoa:Y47D3A.26b.1 EnsemblMetazoa:Y47D3A.26b.2
GeneID:176559 KEGG:cel:CELE_Y47D3A.26 CTD:176559
WormBase:Y47D3A.26b InParanoid:B2FDA8 NextBio:893080
ArrayExpress:B2FDA8 Uniprot:B2FDA8
Length = 1261
Score = 199 (75.1 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 45/152 (29%), Positives = 79/152 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
M IK + + GF+SY ++ F N + G NG+GKSN I FVL + ++
Sbjct: 1 MKIKEVRITGFRSYKDNTNVSGFSPRSNVVVGRNGSGKSNFFHAIQFVLSDEYAHLKEEQ 60
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L++++ V A V +TFDNS+K+ + +EN + I RQ+ +Y I+
Sbjct: 61 RLGLLHESTGPKVAHARVEITFDNSEKRL--MAFENSE-VKIVRQVG-KKKDQYYIDNKM 116
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 117 VPRAEVVNLMESAGFSRSNPYYIVKQGKINEL 148
>CGD|CAL0001080 [details] [associations]
symbol:SMC1 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0001080
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
EMBL:AACQ01000091 EMBL:AACQ01000090 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06636 RefSeq:XP_715092.1 RefSeq:XP_715143.1
ProteinModelPortal:Q5A021 SMR:Q5A021 STRING:Q5A021 GeneID:3643221
GeneID:3643229 KEGG:cal:CaO19.11845 KEGG:cal:CaO19.4367
Uniprot:Q5A021
Length = 1240
Score = 198 (74.8 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 51/156 (32%), Positives = 78/156 (50%)
Query: 8 LDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTLQELIYK 67
L FKSY + I F +I G NG GKSN++D I FVLG+ +R+ L++LIY+
Sbjct: 9 LFNFKSYKGKSIIGFGSSYFTSIIGPNGAGKSNMMDAISFVLGVNSYHLRSQNLKDLIYR 68
Query: 68 NGQAGVTKASVTLTFDNSDKKNCPI--GYENDN--TIVICRQISIPSNTRYMINGSSVNP 123
G+ + S TL D + + YE D+ + + R I+ N+ Y ING SV
Sbjct: 69 -GRRNIDTDSTTLDAIEQDPTSAYVMATYEKDDGEILKLKRTITASGNSDYQINGQSVTM 127
Query: 124 KRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
S + N+ + +FL+ QG V + + P +
Sbjct: 128 LNYSMVLKQENILIKARNFLVFQGDVETIASQNPKD 163
>UNIPROTKB|Q71YL3 [details] [associations]
symbol:smC "Chromosome partition protein Smc"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529
TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_014424.1
ProteinModelPortal:Q71YL3 STRING:Q71YL3 GeneID:2797604
KEGG:lmf:LMOf2365_1831 PATRIC:20324957 ProtClustDB:CLSK2518461
Uniprot:Q71YL3
Length = 1186
Score = 197 (74.4 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 51/162 (31%), Positives = 84/162 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
M +K + ++GFKS+ +V I DF A+ G NG+GKSNI + I +VLG Q K +R
Sbjct: 1 MLLKRLEMNGFKSFADKVAI-DFVPGMTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGG 59
Query: 60 TLQELIYKNGQAG--VTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
+ ++I+ + A V+L +N D P+ Y + + R+I ++ ++IN
Sbjct: 60 RMGDVIFAGSDTRKPINFAEVSLILENEDHF-LPLDYSE---VAVTRRIYRNGDSEFLIN 115
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ K + DLF L +I QG++ ++LN KP E
Sbjct: 116 KENCRLKDIVDLFMDSGLG-RESFSIISQGKIDEILNSKPEE 156
>UNIPROTKB|C9JR83 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR003395 Pfam:PF02463 EMBL:AC024221
HGNC:HGNC:14013 HOGENOM:HOG000201987 IPI:IPI00947372
ProteinModelPortal:C9JR83 SMR:C9JR83 STRING:C9JR83
Ensembl:ENST00000489573 ArrayExpress:C9JR83 Bgee:C9JR83
Uniprot:C9JR83
Length = 423
Score = 188 (71.2 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 82 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 141
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R + + Y I+G
Sbjct: 142 LSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISG 201
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 202 KKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 240
>SGD|S000001886 [details] [associations]
symbol:SMC1 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0000217 "DNA secondary structure binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0003680 "AT DNA
binding" evidence=IDA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 SGD:S000001886
Pfam:PF02463 GO:GO:0005524 GO:GO:0051301 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0006302
GO:GO:0030261 GO:GO:0003680 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 PDB:1W1W PDBsum:1W1W GO:GO:0034990
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 OrthoDB:EOG42VCQD EMBL:L00602
PIR:A49464 RefSeq:NP_116647.1 ProteinModelPortal:P32908 SMR:P32908
DIP:DIP-2982N IntAct:P32908 MINT:MINT-434606 STRING:P32908
PaxDb:P32908 PeptideAtlas:P32908 EnsemblFungi:YFL008W GeneID:850540
KEGG:sce:YFL008W CYGD:YFL008w EvolutionaryTrace:P32908
NextBio:966301 Genevestigator:P32908 GermOnline:YFL008W
GO:GO:0000217 Uniprot:P32908
Length = 1225
Score = 195 (73.7 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 52/160 (32%), Positives = 86/160 (53%)
Query: 8 LDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTLQELIYK 67
L FKSY ++ + F +I G NG+GKSN++D I FVLG++ +R+N L++LIY+
Sbjct: 9 LSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVRSNHLRSNILKDLIYR 68
Query: 68 NGQAGVTKASVTLTFDN-----SDKKNCPIG--YENDNTIV-ICRQISIPSNTRYMINGS 119
GV + +DN S+ ++ + Y+ N +V + R IS +T Y I+G
Sbjct: 69 ----GVLNDENSDDYDNEGAASSNPQSAYVKAFYQKGNKLVELMRIISRNGDTSYKIDGK 124
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+V+ K S + N+ + +FL+ QG V ++ P E
Sbjct: 125 TVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVE 164
>RGD|1306680 [details] [associations]
symbol:Smc4 "structural maintenance of chromosomes 4"
species:10116 "Rattus norvegicus" [GO:0000796 "condensin complex"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007076 "mitotic chromosome
condensation" evidence=ISO] [GO:0010032 "meiotic chromosome
condensation" evidence=ISO] [GO:0045132 "meiotic chromosome
segregation" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051383 "kinetochore organization"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003395 Pfam:PF02463 RGD:1306680 eggNOG:COG1196
HOGENOM:HOG000184777 OrthoDB:EOG4PZJ5V IPI:IPI00372213
UniGene:Rn.163695 EMBL:BC107944 ProteinModelPortal:Q32PX5
STRING:Q32PX5 UCSC:RGD:1306680 HOVERGEN:HBG082271 InParanoid:Q32PX5
Genevestigator:Q32PX5 Uniprot:Q32PX5
Length = 434
Score = 188 (71.2 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 80 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 139
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R + + Y I+G
Sbjct: 140 LSVLIHNSDEHTDIQSCTVEVHFQKIIDKEGDDYDVLPNSNFYVSRTAYRDNTSVYHISG 199
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 200 KKRTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 238
>UNIPROTKB|F1NDN4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 EMBL:AADN02021066
IPI:IPI00684483 Ensembl:ENSGALT00000032997 ArrayExpress:F1NDN4
Uniprot:F1NDN4
Length = 1274
Score = 194 (73.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 47/159 (29%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 53 LMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGPNGSGKSNVIDAMLFVFGYRAQKIRSKK 112
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + SV + F DK+ ++ + R +++ Y ING
Sbjct: 113 LSVLIHNSEEHTDIQSCSVEVHFQKIIDKEGDDYEVIPNSNFCVSRTAYRDNSSVYHING 172
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V L S +++++ FLI+QG V ++ MKP
Sbjct: 173 KKSTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKP 211
>UNIPROTKB|F1P3C6 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:AADN02021066 IPI:IPI00573837 Ensembl:ENSGALT00000015551
ArrayExpress:F1P3C6 Uniprot:F1P3C6
Length = 1300
Score = 194 (73.4 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 47/159 (29%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 79 LMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGPNGSGKSNVIDAMLFVFGYRAQKIRSKK 138
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + SV + F DK+ ++ + R +++ Y ING
Sbjct: 139 LSVLIHNSEEHTDIQSCSVEVHFQKIIDKEGDDYEVIPNSNFCVSRTAYRDNSSVYHING 198
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V L S +++++ FLI+QG V ++ MKP
Sbjct: 199 KKSTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKP 237
>UNIPROTKB|Q9X0R4 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:243274 "Thermotoga maritima MSB8" [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
EMBL:AE000512 GenomeReviews:AE000512_GR GO:GO:0007062
SUPFAM:SSF75553 KO:K03529 TIGRFAMs:TIGR02168 EMBL:AGIJ01000001
PIR:A72287 RefSeq:NP_228987.1 PDB:1E69 PDB:1GXJ PDB:1GXK PDB:1GXL
PDBsum:1E69 PDBsum:1GXJ PDBsum:1GXK PDBsum:1GXL SMR:Q9X0R4
GeneID:898303 KEGG:tma:TM1182 PATRIC:23937304 OMA:NNEVHAL
ProtClustDB:CLSK875623 EvolutionaryTrace:Q9X0R4 Uniprot:Q9X0R4
Length = 1170
Score = 191 (72.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 52/162 (32%), Positives = 82/162 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVK-QVRAN 59
M +K + L GFKS+G R + F AI G NG+GKSNI+D I +V G Q K ++RA+
Sbjct: 1 MRLKKLYLKGFKSFG-RPSLIGFSDRVTAIVGPNGSGKSNIIDAIKWVFGEQSKKELRAS 59
Query: 60 TLQELIYKNGQ--AGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
++I+ + A V L F+ EN I + R++ Y +N
Sbjct: 60 EKFDMIFAGSENLPPAGSAYVELVFE-----------ENGEEITVARELKRTGENTYYLN 108
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
GS V K + D F+ L V+ + ++ QG++ +++N P E
Sbjct: 109 GSPVRLKDIRDRFAGTGLGVDF-YSIVGQGQIDRIVNASPEE 149
>MGI|MGI:1917349 [details] [associations]
symbol:Smc4 "structural maintenance of chromosomes 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000796 "condensin complex" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=ISO] [GO:0010032
"meiotic chromosome condensation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IMP]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 MGI:MGI:1917349
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0006310 GO:GO:0046982
GO:GO:0045132 GO:GO:0007076 GO:GO:0051383 GO:GO:0000796
GO:GO:0010032 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 PDB:3L51
PDBsum:3L51 OMA:IAIEFLT CTD:10051 HOGENOM:HOG000184777
HOVERGEN:HBG106696 OrthoDB:EOG4PZJ5V EMBL:AJ534940 EMBL:BC005507
EMBL:BC062939 EMBL:AK088350 EMBL:AK088846 IPI:IPI00229397
RefSeq:NP_598547.1 UniGene:Mm.206841 ProteinModelPortal:Q8CG47
SMR:Q8CG47 STRING:Q8CG47 PhosphoSite:Q8CG47 PaxDb:Q8CG47
PRIDE:Q8CG47 Ensembl:ENSMUST00000042901 GeneID:70099 KEGG:mmu:70099
UCSC:uc008pma.1 InParanoid:Q8CG47 ChiTaRS:SMC4
EvolutionaryTrace:Q8CG47 NextBio:330998 Bgee:Q8CG47 CleanEx:MM_SMC4
Genevestigator:Q8CG47 GermOnline:ENSMUSG00000034349 Uniprot:Q8CG47
Length = 1286
Score = 191 (72.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 46/159 (28%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 80 LMITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 139
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R S + Y I+G
Sbjct: 140 LSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVLPNSNFYVSRTAYRDSTSVYHISG 199
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 200 KKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 238
>TIGR_CMR|CHY_1443 [details] [associations]
symbol:CHY_1443 "chromosome segregation protein SMC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=ISS] [GO:0030261 "chromosome condensation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392
KO:K03529 TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_360275.1
ProteinModelPortal:Q3AC59 STRING:Q3AC59 GeneID:3728135
KEGG:chy:CHY_1443 PATRIC:21276017
BioCyc:CHYD246194:GJCN-1442-MONOMER Uniprot:Q3AC59
Length = 1185
Score = 190 (71.9 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 52/160 (32%), Positives = 83/160 (51%)
Query: 3 IKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLG-IQVKQVRANTL 61
+K +V+ GFKS+ + EI F+ I G NG+GKSN+ + I + LG + K +R+
Sbjct: 2 LKKVVIQGFKSFAEKTEIT-FEPSITGIVGPNGSGKSNVAEAIRWALGETKTKILRSERQ 60
Query: 62 QELIY--KNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
Q++I+ G+ V A VTL DNS+K + P+ Y I I R+ + + IN S
Sbjct: 61 QDVIFTGSQGRKPVGMAEVTLILDNSNK-HFPLPYAE---IAITRRFFRSGESEFYINKS 116
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
K + +L L + + +I QG+V ++L P E
Sbjct: 117 PCRLKDIHELLVDTGLGKHG-YAIIGQGQVDEILFSSPEE 155
>UNIPROTKB|F1NEA6 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0051276 SUPFAM:SSF75553 GeneTree:ENSGT00580000081628
EMBL:AADN02030887 EMBL:AADN02030888 IPI:IPI00684346
Ensembl:ENSGALT00000033118 ArrayExpress:F1NEA6 Uniprot:F1NEA6
Length = 1217
Score = 190 (71.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 44/151 (29%), Positives = 77/151 (50%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
Y+KS+++ GF+SY + ++ F + N I G NG+GKSN I FVL + +
Sbjct: 2 YLKSVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLPPLKR 61
Query: 62 QELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSSV 121
L+++ V A V + FDNSD + PI E V R++ +Y ++ V
Sbjct: 62 LALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKKMV 116
Query: 122 NPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V +L S + +NP++++ QG++ ++
Sbjct: 117 TKNDVMNLLESAGFSRSNPYYIVKQGKINQM 147
>UNIPROTKB|E2RCX4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:AAEX03017331 RefSeq:XP_535848.2
Ensembl:ENSCAFT00000022729 GeneID:478679 KEGG:cfa:478679
Uniprot:E2RCX4
Length = 1288
Score = 189 (71.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 82 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 141
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R + + Y I+G
Sbjct: 142 LSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTAYRDNTSVYHISG 201
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 202 KKTTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 240
>UNIPROTKB|P50532 [details] [associations]
symbol:smc4 "Structural maintenance of chromosomes protein
4" species:8355 "Xenopus laevis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 KO:K06675 SUPFAM:SSF75553
CTD:10051 HOVERGEN:HBG106696 EMBL:U13673 PIR:A55094
RefSeq:NP_001081371.1 UniGene:Xl.927 ProteinModelPortal:P50532
IntAct:P50532 GeneID:397799 KEGG:xla:397799 Xenbase:XB-GENE-5865892
Uniprot:P50532
Length = 1290
Score = 189 (71.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 48/160 (30%), Positives = 84/160 (52%)
Query: 1 MYIKSMVLDGFKSY-GTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRAN 59
+ I +V FKSY G R+ + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 76 LMITHIVNQNFKSYAGERI-LGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSK 134
Query: 60 TLQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
L LI+ + + V +V + F DK+ ++ + R +++ Y I+
Sbjct: 135 KLSVLIHNSDEHKDVQSCTVEVHFQKIIDKEGDDFEVIPNSNFYVSRTAYKDNSSVYHIS 194
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
G K V L S +++++ FLI+QG V ++ MKP
Sbjct: 195 GKKATFKDVGLLLRSHGIDLDHNRFLILQGEVEQIAMMKP 234
>UNIPROTKB|E9PD53 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 EMBL:AC024221 HGNC:HGNC:14013
IPI:IPI00793575 ProteinModelPortal:E9PD53 SMR:E9PD53
Ensembl:ENST00000469762 UCSC:uc003fdi.3 ArrayExpress:E9PD53
Bgee:E9PD53 Uniprot:E9PD53
Length = 1263
Score = 188 (71.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 57 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 116
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R + + Y I+G
Sbjct: 117 LSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISG 176
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 177 KKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 215
>UNIPROTKB|F1MAD9 [details] [associations]
symbol:Smc4 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:1306680 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 IPI:IPI00372213 RefSeq:NP_001032262.2 UniGene:Rn.163695
Ensembl:ENSRNOT00000013931 GeneID:295107 KEGG:rno:295107
NextBio:638993 Uniprot:F1MAD9
Length = 1286
Score = 188 (71.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 80 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 139
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R + + Y I+G
Sbjct: 140 LSVLIHNSDEHTDIQSCTVEVHFQKIIDKEGDDYDVLPNSNFYVSRTAYRDNTSVYHISG 199
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 200 KKRTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 238
>UNIPROTKB|Q9NTJ3 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IDA;TAS]
[GO:0007076 "mitotic chromosome condensation" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0005524 "ATP binding"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 EMBL:CH471052
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 KO:K06675 SUPFAM:SSF75553
EMBL:AC024221 OMA:IAIEFLT EMBL:AB019987 EMBL:AL136877 EMBL:AL833949
EMBL:AF092564 IPI:IPI00328298 IPI:IPI00411559 PIR:T46486
RefSeq:NP_001002800.1 RefSeq:NP_005487.3 UniGene:Hs.58992
ProteinModelPortal:Q9NTJ3 SMR:Q9NTJ3 IntAct:Q9NTJ3
MINT:MINT-5005675 STRING:Q9NTJ3 PhosphoSite:Q9NTJ3 DMDM:30173386
PaxDb:Q9NTJ3 PeptideAtlas:Q9NTJ3 PRIDE:Q9NTJ3 DNASU:10051
Ensembl:ENST00000344722 Ensembl:ENST00000357388
Ensembl:ENST00000360111 Ensembl:ENST00000462787 GeneID:10051
KEGG:hsa:10051 UCSC:uc003fdh.3 UCSC:uc010hwd.3 CTD:10051
GeneCards:GC03P160117 HGNC:HGNC:14013 HPA:HPA018259 HPA:HPA029449
MIM:605575 neXtProt:NX_Q9NTJ3 PharmGKB:PA37834 HOGENOM:HOG000184777
HOVERGEN:HBG106696 InParanoid:Q9NTJ3 OrthoDB:EOG4PZJ5V
PhylomeDB:Q9NTJ3 GenomeRNAi:10051 NextBio:37969 ArrayExpress:Q9NTJ3
Bgee:Q9NTJ3 CleanEx:HS_SMC4 Genevestigator:Q9NTJ3
GermOnline:ENSG00000113810 Uniprot:Q9NTJ3
Length = 1288
Score = 188 (71.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 82 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 141
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R + + Y I+G
Sbjct: 142 LSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISG 201
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 202 KKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 240
>UNIPROTKB|F1SH51 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:CU466375 RefSeq:XP_001927540.1 UniGene:Ssc.7850
Ensembl:ENSSSCT00000012842 GeneID:100152361 KEGG:ssc:100152361
Uniprot:F1SH51
Length = 1288
Score = 188 (71.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 45/159 (28%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 82 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 141
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R + + Y I+G
Sbjct: 142 LSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGNDYEVVPNSNFYVSRTAYRDNTSVYHISG 201
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 202 KKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 240
>UNIPROTKB|Q5LNH7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0003824 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K03529
RefSeq:YP_168431.1 ProteinModelPortal:Q5LNH7 GeneID:3194939
KEGG:sil:SPO3228 PATRIC:23379903 HOGENOM:HOG000036390 OMA:AHERVQA
ProtClustDB:CLSK864767 Uniprot:Q5LNH7
Length = 1151
Score = 187 (70.9 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 47/160 (29%), Positives = 85/160 (53%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGI-QVKQVRAN 59
M + L GFKS+ ++ D I G NG GKSN+L+ + +V+G + K +R
Sbjct: 1 MRFNRLKLTGFKSFVDPTDLIIADG-LTGIVGPNGCGKSNLLEALRWVMGENRPKAMRGG 59
Query: 60 TLQELIYKNGQAGVTK--ASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
++++I+ + + A VTL DNS++ P G+ + + + I R+I+ + Y N
Sbjct: 60 GMEDVIFAGASSRPARNFAEVTLLMDNSERL-APSGFNDADQLEIVRRITRDVGSAYKAN 118
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
G V + V LF+ + ++P L+ QG++ +++N KP
Sbjct: 119 GKDVRARDVQILFADASTGAHSPA-LVRQGQIAELINAKP 157
>TIGR_CMR|SPO_3228 [details] [associations]
symbol:SPO_3228 "SMC protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0003824 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K03529
RefSeq:YP_168431.1 ProteinModelPortal:Q5LNH7 GeneID:3194939
KEGG:sil:SPO3228 PATRIC:23379903 HOGENOM:HOG000036390 OMA:AHERVQA
ProtClustDB:CLSK864767 Uniprot:Q5LNH7
Length = 1151
Score = 187 (70.9 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 47/160 (29%), Positives = 85/160 (53%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGI-QVKQVRAN 59
M + L GFKS+ ++ D I G NG GKSN+L+ + +V+G + K +R
Sbjct: 1 MRFNRLKLTGFKSFVDPTDLIIADG-LTGIVGPNGCGKSNLLEALRWVMGENRPKAMRGG 59
Query: 60 TLQELIYKNGQAGVTK--ASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
++++I+ + + A VTL DNS++ P G+ + + + I R+I+ + Y N
Sbjct: 60 GMEDVIFAGASSRPARNFAEVTLLMDNSERL-APSGFNDADQLEIVRRITRDVGSAYKAN 118
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
G V + V LF+ + ++P L+ QG++ +++N KP
Sbjct: 119 GKDVRARDVQILFADASTGAHSPA-LVRQGQIAELINAKP 157
>GENEDB_PFALCIPARUM|PFD0685c [details] [associations]
symbol:PFD0685c "chromosome associated protein,
putative" species:5833 "Plasmodium falciparum" [GO:0000228 "nuclear
chromosome" evidence=ISS] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0051301 GO:GO:0006275 GO:GO:0000785 HSSP:P58301 GO:GO:0000070
EMBL:AL844503 GO:GO:0003680 eggNOG:COG1196 SUPFAM:SSF75553
GenomeReviews:AL844503_GR GO:GO:0034990 KO:K06669
RefSeq:XP_001351448.1 ProteinModelPortal:Q8I1U7 IntAct:Q8I1U7
MINT:MINT-1568808 PRIDE:Q8I1U7 EnsemblProtists:PFD0685c:mRNA
GeneID:812569 KEGG:pfa:PFD0685c EuPathDB:PlasmoDB:PF3D7_0414000
HOGENOM:HOG000282685 OMA:CASTINS ProtClustDB:CLSZ2514476
Uniprot:Q8I1U7
Length = 1193
Score = 187 (70.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 55/159 (34%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK + L GF++Y I DF R N I G NG+GKSNIL I F+L V + +
Sbjct: 1 MYIKQIRLKGFRTYKNETTI-DFTRGINCIVGFNGSGKSNILLAIEFILS-DVCEYKQIY 58
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L E I G A V V + FDNS+K ++ I I +++ +N +
Sbjct: 59 LHEGI---GNA-VRNCYVEIIFDNSEKY---FSMFKESEIKI-KKVLENMKCEIFVNDKN 110
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
++ + +L S L +NN + +I QG++ K+ NMK E
Sbjct: 111 ISKNQYVELLESCGLCINNLYNIIKQGQIIKLSNMKDEE 149
>UNIPROTKB|Q8I1U7 [details] [associations]
symbol:PFD0685c "Structural maintenance of chromosomes
protein 3 homolog" species:36329 "Plasmodium falciparum 3D7"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0000228 "nuclear chromosome" evidence=ISS] [GO:0000785
"chromatin" evidence=ISS] [GO:0003680 "AT DNA binding"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=ISS] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0051301
GO:GO:0006275 GO:GO:0000785 HSSP:P58301 GO:GO:0000070 EMBL:AL844503
GO:GO:0003680 eggNOG:COG1196 SUPFAM:SSF75553
GenomeReviews:AL844503_GR GO:GO:0034990 KO:K06669
RefSeq:XP_001351448.1 ProteinModelPortal:Q8I1U7 IntAct:Q8I1U7
MINT:MINT-1568808 PRIDE:Q8I1U7 EnsemblProtists:PFD0685c:mRNA
GeneID:812569 KEGG:pfa:PFD0685c EuPathDB:PlasmoDB:PF3D7_0414000
HOGENOM:HOG000282685 OMA:CASTINS ProtClustDB:CLSZ2514476
Uniprot:Q8I1U7
Length = 1193
Score = 187 (70.9 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 55/159 (34%), Positives = 81/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
MYIK + L GF++Y I DF R N I G NG+GKSNIL I F+L V + +
Sbjct: 1 MYIKQIRLKGFRTYKNETTI-DFTRGINCIVGFNGSGKSNILLAIEFILS-DVCEYKQIY 58
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L E I G A V V + FDNS+K ++ I I +++ +N +
Sbjct: 59 LHEGI---GNA-VRNCYVEIIFDNSEKY---FSMFKESEIKI-KKVLENMKCEIFVNDKN 110
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
++ + +L S L +NN + +I QG++ K+ NMK E
Sbjct: 111 ISKNQYVELLESCGLCINNLYNIIKQGQIIKLSNMKDEE 149
>UNIPROTKB|F1NYB2 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007052 "mitotic spindle organization" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0007052 GO:GO:0000785 GO:GO:0016363 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0000800 SUPFAM:SSF75553
GO:GO:0030893 OMA:NKVLEHF GeneTree:ENSGT00580000081628
EMBL:AADN02030887 EMBL:AADN02030888 IPI:IPI00598955
Ensembl:ENSGALT00000013979 ArrayExpress:F1NYB2 Uniprot:F1NYB2
Length = 1219
Score = 185 (70.2 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 45/153 (29%), Positives = 77/153 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNIL-DGICFVLGIQVKQVRAN 59
MYIK +++ GF+SY + ++ F + N I G NG+GKSN I FVL + +
Sbjct: 1 MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAAIQFVLSDEFSHLPPL 60
Query: 60 TLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
L+++ V A V + FDNSD + PI E V R++ +Y ++
Sbjct: 61 KRLALLHEGTGPRVISAFVEIIFDNSDNR-LPIDKEE----VSLRRVIGAKKDQYFLDKK 115
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKV 152
V V +L S + +NP++++ QG++ ++
Sbjct: 116 MVTKNDVMNLLESAGFSRSNPYYIVKQGKINQM 148
>UNIPROTKB|E1BMZ9 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:DAAA02002417 EMBL:DAAA02002418 IPI:IPI00703154
Ensembl:ENSBTAT00000007705 ArrayExpress:E1BMZ9 Uniprot:E1BMZ9
Length = 1288
Score = 185 (70.2 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 44/159 (27%), Positives = 80/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 82 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 141
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R + + Y ++G
Sbjct: 142 LSVLIHNSDEHKDIQSCTVAVHFQKIIDKEGDDYEVIPNSNFYVSRTAYRDNTSVYHVSG 201
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V L S +++++ FLI+QG V ++ MKP
Sbjct: 202 KKTTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKP 240
>UNIPROTKB|O93308 [details] [associations]
symbol:smc1a "Structural maintenance of chromosomes protein
1A" species:8355 "Xenopus laevis" [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0030893 "meiotic cohesin
complex" evidence=ISS] [GO:0042770 "signal transduction in response
to DNA damage" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039593 EMBL:AF051784
RefSeq:NP_001165905.1 UniGene:Xl.4734 ProteinModelPortal:O93308
IntAct:O93308 GeneID:100379087 KEGG:xla:100379087 CTD:100379087
Uniprot:O93308
Length = 1232
Score = 184 (69.8 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 51/160 (31%), Positives = 78/160 (48%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFHR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E V R I + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEDS------GEEK----VFSRVI-VGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V SD + + + +FL+ QG V + P E
Sbjct: 111 VVQLSEYSDSLEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>UNIPROTKB|G3X7C0 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042770 "signal transduction in response to DNA
damage" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0009314 "response to radiation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0000075
"cell cycle checkpoint" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000776 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:DAAA02073280
EMBL:DAAA02073281 Ensembl:ENSBTAT00000023619 Uniprot:G3X7C0
Length = 1232
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E D T ++ + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEE-------GAE-DRTFA---RVIVGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>UNIPROTKB|O97593 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0042770 "signal transduction in
response to DNA damage" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0036033 "mediator
complex binding" evidence=IEA] [GO:0032876 "negative regulation of
DNA endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 GO:GO:0005737 GO:GO:0000776 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030893 EMBL:AF072712 IPI:IPI00687474 PIR:S71602
RefSeq:NP_777039.1 UniGene:Bt.109789 ProteinModelPortal:O97593
STRING:O97593 PRIDE:O97593 GeneID:282370 KEGG:bta:282370 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 InParanoid:O97593 KO:K06636
OrthoDB:EOG4HX507 NextBio:20806162 Uniprot:O97593
Length = 1233
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E D T ++ + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEE-------GAE-DRTFA---RVIVGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>UNIPROTKB|E2QV07 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 CTD:8243 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 EMBL:AAEX03026385 RefSeq:XP_538049.3
Ensembl:ENSCAFT00000025795 GeneID:480928 KEGG:cfa:480928
Uniprot:E2QV07
Length = 1233
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E D T ++ + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEE-------GAE-DRTFA---RVIVGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>UNIPROTKB|Q14683 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0042770
"signal transduction in response to DNA damage" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=IDA] [GO:0009314 "response to radiation"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008280 "cohesin core heterodimer" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=TAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=TAS] [GO:0000776 "kinetochore" evidence=IDA] [GO:0007126
"meiosis" evidence=ISS] [GO:0000070 "mitotic sister chromatid
segregation" evidence=TAS] [GO:0030893 "meiotic cohesin complex"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007091 "metaphase/anaphase transition of mitotic
cell cycle" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_21300
GO:GO:0000776 GO:GO:0051301 GO:GO:0007052 GO:GO:0006281
Reactome:REACT_1675 GO:GO:0003682 GO:GO:0042770
Reactome:REACT_111183 GO:GO:0006310 GO:GO:0000794 GO:GO:0030261
GO:GO:0009314 GO:GO:0003777 GO:GO:0032876 GO:GO:0007091
GO:GO:0000398 GO:GO:0000075 GO:GO:0000236 GO:GO:0000777
GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553 EMBL:Z97054
Orphanet:199 EMBL:AL161779 GO:GO:0030893 GO:GO:0008280 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:S78271 EMBL:D80000 EMBL:BC112127 IPI:IPI00291939 PIR:I54383
RefSeq:NP_006297.2 UniGene:Hs.211602 ProteinModelPortal:Q14683
SMR:Q14683 DIP:DIP-30911N IntAct:Q14683 MINT:MINT-233274
STRING:Q14683 PhosphoSite:Q14683 DMDM:29336622 PaxDb:Q14683
PeptideAtlas:Q14683 PRIDE:Q14683 Ensembl:ENST00000322213
GeneID:8243 KEGG:hsa:8243 UCSC:uc004dsg.3 GeneCards:GC0XM053417
HGNC:HGNC:11111 HPA:CAB025404 HPA:HPA005499 MIM:300040 MIM:300590
neXtProt:NX_Q14683 PharmGKB:PA35961 InParanoid:Q14683 OMA:NALVCET
PhylomeDB:Q14683 ChiTaRS:SMC1A GenomeRNAi:8243 NextBio:31006
ArrayExpress:Q14683 Bgee:Q14683 CleanEx:HS_SMC1A
Genevestigator:Q14683 GermOnline:ENSG00000072501 Uniprot:Q14683
Length = 1233
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E D T ++ + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEE-------GAE-DRTFA---RVIVGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>UNIPROTKB|F2Z5A8 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 EMBL:GACC01000120 RefSeq:XP_003135172.3
Ensembl:ENSSSCT00000013478 GeneID:100523938 KEGG:ssc:100523938
Uniprot:F2Z5A8
Length = 1233
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E D T ++ + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEE-------GAE-DRTFA---RVIVGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>MGI|MGI:1344345 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10090 "Mus musculus" [GO:0000075 "cell cycle checkpoint"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;IDA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=IDA] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=ISO] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:1344345 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0005654 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
GO:GO:0006281 GO:GO:0003682 GO:GO:0042770 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030261 GO:GO:0009314 GO:GO:0032876 GO:GO:0019827
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:AL672180 GO:GO:0036033 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AF047600 EMBL:BC131667 EMBL:AK007334 EMBL:AK013648
EMBL:AK017948 EMBL:AK088183 IPI:IPI00123870 RefSeq:NP_062684.2
UniGene:Mm.482095 PDB:2WD5 PDBsum:2WD5 ProteinModelPortal:Q9CU62
SMR:Q9CU62 DIP:DIP-57021N IntAct:Q9CU62 STRING:Q9CU62
PhosphoSite:Q9CU62 PaxDb:Q9CU62 PRIDE:Q9CU62
Ensembl:ENSMUST00000045312 GeneID:24061 KEGG:mmu:24061
GeneTree:ENSGT00580000081569 InParanoid:A2AFQ5
EvolutionaryTrace:Q9CU62 NextBio:304025 Bgee:Q9CU62
CleanEx:MM_SMC1A Genevestigator:Q9CU62
GermOnline:ENSMUSG00000041133 Uniprot:Q9CU62
Length = 1233
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E D T ++ + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEE-------GAE-DRTFA---RVIVGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>RGD|61991 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10116 "Rattus norvegicus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO;ISS] [GO:0000776 "kinetochore"
evidence=ISO;ISS] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IDA] [GO:0009314 "response to radiation"
evidence=ISO;ISS] [GO:0019827 "stem cell maintenance" evidence=ISO]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E D T ++ + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEE-------GAE-DRTFA---RVIVGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>UNIPROTKB|Q9Z1M9 [details] [associations]
symbol:Smc1a "Structural maintenance of chromosomes protein
1A" species:10116 "Rattus norvegicus" [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E D T ++ + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEE-------GAE-DRTFA---RVIVGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>UNIPROTKB|I3LMC6 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 OMA:NALVCET GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 Ensembl:ENSSSCT00000028659
Uniprot:I3LMC6
Length = 1235
Score = 182 (69.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 49/160 (30%), Positives = 79/160 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E D T ++ + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEE-------GAE-DRTFA---RVIVGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVQLHEYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>GENEDB_PFALCIPARUM|PF11_0317 [details] [associations]
symbol:PF11_0317 "structural maintenance of
chromosome protein, putative" species:5833 "Plasmodium falciparum"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0003680 "AT DNA binding" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008278 "cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0016887 GO:GO:0000070
GO:GO:0003690 GO:GO:0003680 EMBL:AE014186 GO:GO:0008278
SUPFAM:SSF75553 KO:K06636 HSSP:Q9X0R4 RefSeq:XP_001347988.1
ProteinModelPortal:Q8II57 EnsemblProtists:PF11_0317:mRNA
GeneID:810864 KEGG:pfa:PF11_0317 EuPathDB:PlasmoDB:PF3D7_1130700
HOGENOM:HOG000282411 OMA:CEREASK ProtClustDB:CLSZ2515177
Uniprot:Q8II57
Length = 1818
Score = 183 (69.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 52/161 (32%), Positives = 78/161 (48%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
+IK +++ FKSY I F + F +I G NG+GKSNI+D ICF LGI K +R L
Sbjct: 290 FIKYIIVSNFKSYEDENIIGPFSK-FTSIIGPNGSGKSNIMDCICFALGINNKYLRVKNL 348
Query: 62 QELIYKNGQAGVTKASVTLTFDNSDKKNC--PIGYE-NDNTIVICRQISIPSNTRYMING 118
+ LIY KA ++ +K+ C I E N + I R ++ + + IN
Sbjct: 349 RNLIYHKENE---KA------EDINKRICYVKIILECNKENVEIKRTLNYKGVSNFYIND 399
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V+ K + + LI QG + ++N KP+E
Sbjct: 400 KLVDQKEYMNFLRKNRIETKTKTCLIFQGDIEDIINKKPNE 440
>UNIPROTKB|Q8II57 [details] [associations]
symbol:PF11_0317 "Structural maintenance of chromosome
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0003680 "AT DNA binding" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0008278 "cohesin complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0016887 GO:GO:0000070
GO:GO:0003690 GO:GO:0003680 EMBL:AE014186 GO:GO:0008278
SUPFAM:SSF75553 KO:K06636 HSSP:Q9X0R4 RefSeq:XP_001347988.1
ProteinModelPortal:Q8II57 EnsemblProtists:PF11_0317:mRNA
GeneID:810864 KEGG:pfa:PF11_0317 EuPathDB:PlasmoDB:PF3D7_1130700
HOGENOM:HOG000282411 OMA:CEREASK ProtClustDB:CLSZ2515177
Uniprot:Q8II57
Length = 1818
Score = 183 (69.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 52/161 (32%), Positives = 78/161 (48%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
+IK +++ FKSY I F + F +I G NG+GKSNI+D ICF LGI K +R L
Sbjct: 290 FIKYIIVSNFKSYEDENIIGPFSK-FTSIIGPNGSGKSNIMDCICFALGINNKYLRVKNL 348
Query: 62 QELIYKNGQAGVTKASVTLTFDNSDKKNC--PIGYE-NDNTIVICRQISIPSNTRYMING 118
+ LIY KA ++ +K+ C I E N + I R ++ + + IN
Sbjct: 349 RNLIYHKENE---KA------EDINKRICYVKIILECNKENVEIKRTLNYKGVSNFYIND 399
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V+ K + + LI QG + ++N KP+E
Sbjct: 400 KLVDQKEYMNFLRKNRIETKTKTCLIFQGDIEDIINKKPNE 440
>TIGR_CMR|GSU_1130 [details] [associations]
symbol:GSU_1130 "chromosome segregation SMC protein,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 TIGRFAMs:TIGR02168 HSSP:Q9X0R4
EMBL:AJ543647 ProteinModelPortal:Q84EX7 PATRIC:22025022
ProtClustDB:CLSK924468 Uniprot:Q84EX7
Length = 1175
Score = 178 (67.7 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 45/162 (27%), Positives = 83/162 (51%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQ-VKQVRAN 59
M IK + + GFKS+ +V DF + I G NG GKSN++D I + +G Q K +R
Sbjct: 1 MKIKRLDIVGFKSFVDKVSF-DFQQGITGIVGPNGCGKSNVVDAIRWAMGEQSAKNLRGR 59
Query: 60 TLQELIYKNGQ--AGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN 117
+++++I+ + + A V++ F D + P Y + + I I R++ + Y +N
Sbjct: 60 SMEDIIFGGSEFRKPLGMAEVSMVFATDDGR-VPAKYLSYSEIQITRRLYRDGESEYFLN 118
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ +++LF + + +I QG++ +L+ KP E
Sbjct: 119 KTPCRLMDITELFMDTGVGAR-AYSIIEQGKIGMILHSKPEE 159
>ZFIN|ZDB-GENE-090506-9 [details] [associations]
symbol:smc1a "structural maintenance of chromosomes
1A" species:7955 "Danio rerio" [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-090506-9 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 CTD:8243 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CR354431 IPI:IPI00506664 RefSeq:NP_001155103.1
UniGene:Dr.120420 Ensembl:ENSDART00000078148 GeneID:559665
KEGG:dre:559665 OMA:ERIRHAN NextBio:20883076 Uniprot:E7F0X6
Length = 1232
Score = 178 (67.7 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 49/160 (30%), Positives = 78/160 (48%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
Y+K + ++ FKSY R I F + F AI G NG+GKSN++D I FVL + +R TL
Sbjct: 3 YLKLIEIENFKSYKGRQIIGPFHK-FTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + + + C R I I S++ Y IN
Sbjct: 62 KDLIHGAPVGKPAANRAFVSMVYCEDNGEEC----------TFTRAI-IGSSSEYRINSK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVGLSDYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>ZFIN|ZDB-GENE-040426-57 [details] [associations]
symbol:smc1al "structural maintenance of chromosomes
1A, like" species:7955 "Danio rerio" [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-040426-57 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
GeneTree:ENSGT00580000081569 EMBL:CR376802 EMBL:CT025883
EMBL:AY648730 IPI:IPI00501499 RefSeq:NP_997975.2 UniGene:Dr.76942
STRING:Q6DRM9 Ensembl:ENSDART00000081016 GeneID:403060
KEGG:dre:403060 CTD:403060 InParanoid:Q6DRM9 OMA:NIGEVAN
NextBio:20816857 Uniprot:Q6DRM9
Length = 1233
Score = 177 (67.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 50/160 (31%), Positives = 78/160 (48%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
Y+K + ++ FKSY R I F + F AI G NG+GKSN++D I FVL + +R TL
Sbjct: 3 YLKLIEIENFKSYKGRQIIGPFHK-FTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A VT+ + G E + +I I S++ Y IN
Sbjct: 62 KDLIHGAPVGKPAANRAFVTMVYQQDG------GQELSFSRII-----IGSSSEYRINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S+ + + + +FL+ QG V + P E
Sbjct: 111 VVGLSDYSEELEKLGILIKARNFLVFQGAVESIAMKNPKE 150
>UNIPROTKB|Q9ERA5 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:47230 "Microtus arvalis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 SUPFAM:SSF75553
HOVERGEN:HBG106696 EMBL:AJ299713 EMBL:AJ299717
ProteinModelPortal:Q9ERA5 Uniprot:Q9ERA5
Length = 1243
Score = 177 (67.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 44/159 (27%), Positives = 80/159 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKS + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 37 LMITHIVNQNFKSCAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 96
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R + + Y I+G
Sbjct: 97 LSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFCVSRTAYRDNTSVYHISG 156
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 157 KKRTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 195
>UNIPROTKB|C9J9E4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR003395 Pfam:PF02463 EMBL:AC024221
HGNC:HGNC:14013 HOGENOM:HOG000031135 IPI:IPI00792419
ProteinModelPortal:C9J9E4 SMR:C9J9E4 STRING:C9J9E4
Ensembl:ENST00000485867 ArrayExpress:C9J9E4 Bgee:C9J9E4
Uniprot:C9J9E4
Length = 157
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 40/148 (27%), Positives = 74/148 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 10 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 69
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
L LI+ + + + +V + F DK+ ++ + R + + Y I+G
Sbjct: 70 LSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISG 129
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQ 146
K V +L S +++++ FLI+Q
Sbjct: 130 KKKTFKDVGNLLRSHGIDLDHNRFLILQ 157
>FB|FBgn0040283 [details] [associations]
symbol:SMC1 "SMC1" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0008278 "cohesin
complex" evidence=ISS;IDA;NAS] [GO:0007062 "sister chromatid
cohesion" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IGI] [GO:0005694 "chromosome" evidence=IDA] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0016319 "mushroom body
development" evidence=IMP] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0035327 "transcriptionally active chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005700
"polytene chromosome" evidence=IDA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0006281 GO:GO:0016322 GO:GO:0048813 GO:GO:0006310
GO:GO:0016319 GO:GO:0010629 GO:GO:0030261 GO:GO:0005700
GO:GO:0035327 GO:GO:0008278 GO:GO:0007062 SUPFAM:SSF75553
HSSP:Q9X0R4 EMBL:AF225909 EMBL:AJ271845 STRING:Q9N6I4
FlyBase:FBgn0040283 InParanoid:Q9N6I4 OrthoDB:EOG4QNKB0
Uniprot:Q9N6I4
Length = 1238
Score = 172 (65.6 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 44/160 (27%), Positives = 81/160 (50%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
+++ + ++ FKSY + + ++FNA+ G NG+GKSN +D I FV+G + +R L
Sbjct: 26 FLEYIEMENFKSYRGHIVVGPL-KQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRL 84
Query: 62 QELIYKNGQAGVTKAS--VTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+LI+ + S VT F +++++ + ++ R + I ++ Y ING
Sbjct: 85 NDLIHGSSIGNPVSRSCYVTAKFVLNEERH--MDFQ--------RAV-IGGSSEYRINGE 133
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
SV+ + + +NV +FL+ QG V + P E
Sbjct: 134 SVSSSTYLNKLEKIGINVKAKNFLVFQGAVENIAMKTPKE 173
>UNIPROTKB|G8JLG1 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
EMBL:Z97054 EMBL:AL161779 HGNC:HGNC:11111 ChiTaRS:SMC1A
ProteinModelPortal:G8JLG1 SMR:G8JLG1 Ensembl:ENST00000375340
Bgee:G8JLG1 Uniprot:G8JLG1
Length = 516
Score = 164 (62.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 45/147 (30%), Positives = 74/147 (50%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
++K + ++ FKSY R I F R F AI G NG+GKSN++D I FVLG + +R TL
Sbjct: 3 FLKLIEIENFKSYKGRQIIGPFQR-FTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
++LI+ G+ +A V++ + G E D T ++ + ++ Y IN
Sbjct: 62 RDLIHGAPVGKPAANRAFVSMVYSEE-------GAE-DRTFA---RVIVGGSSEYKINNK 110
Query: 120 SVNPKRVSDLFSSVNLNVNNPHFLIMQ 146
V S+ + + + +FL+ Q
Sbjct: 111 VVQLHEYSEELEKLGILIKARNFLVFQ 137
>DICTYBASE|DDB_G0276101 [details] [associations]
symbol:smc3 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000785 "chromatin" evidence=ISS] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0276101 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0006275 GO:GO:0000785 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0046982 GO:GO:0007064 GO:GO:0008278
eggNOG:COG1196 SUPFAM:SSF75553 HSSP:P32908 KO:K06669
RefSeq:XP_643274.1 ProteinModelPortal:Q552D9 STRING:Q552D9
PRIDE:Q552D9 EnsemblProtists:DDB0219934 GeneID:8620317
KEGG:ddi:DDB_G0276101 InParanoid:Q552D9 OMA:EHERRES
ProtClustDB:CLSZ2734975 Uniprot:Q552D9
Length = 1437
Score = 169 (64.5 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 46/158 (29%), Positives = 80/158 (50%)
Query: 1 MYIKSMVLDGFKSYGTRVEIN-DFDREFNAITGLNGTGKSNILDGICFVLG-IQVKQVRA 58
M+IK + + GF+SY + + FN +TG NG GKSN+ I F+LG + V
Sbjct: 1 MFIKFIFIKGFRSYKDQGFTSITLHPGFNVVTGRNGAGKSNLFAAIRFLLGDLNVGNNSE 60
Query: 59 NTLQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMING 118
+ L+ L++ G + V + FDNSD + PI D T R+ S + I
Sbjct: 61 DRLK-LLHSYGGNTMQTGYVEIVFDNSDHR-FPI----DKTEFSLRRTFGTSKDEFSIGN 114
Query: 119 SSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMK 156
+ ++ V ++F + + +NP++++ QG++ + MK
Sbjct: 115 NKLSKADVRNMFEAAGFSSSNPYYIVQQGKINTLALMK 152
>POMBASE|SPBC29A10.04 [details] [associations]
symbol:psm1 "mitotic cohesin complex subunit Psm1"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] [GO:0008278 "cohesin complex"
evidence=IDA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030892 "mitotic cohesin complex" evidence=NAS] [GO:0046982
"protein heterodimerization activity" evidence=IPI]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
PomBase:SPBC29A10.04 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0006310 GO:GO:0030261 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 GO:GO:0030892 HOGENOM:HOG000195481 PIR:T40059
RefSeq:NP_596049.2 IntAct:O94383 STRING:O94383 PRIDE:O94383
GeneID:2540557 OrthoDB:EOG42VCQD NextBio:20801683 Uniprot:O94383
Length = 1228
Score = 163 (62.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/156 (31%), Positives = 77/156 (49%)
Query: 8 LDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTLQELIYK 67
++ FKSY I F+ +F +I G NG GKSN++D I FVLG++ +R+ ++ELIY+
Sbjct: 9 VENFKSYRGHQIIGPFE-DFTSIIGPNGAGKSNLMDAISFVLGVKSSHLRSTNVKELIYR 67
Query: 68 NGQAGVTKASVTLTFDNSDKKNCPIG--YENDN--TIVICRQISIPSNTRYMINGSSVNP 123
G+ + + + T D+S+ + YE DN R I+ T Y I+ V
Sbjct: 68 -GKI-LQRDNTDFT-DSSNPTTAYVKLMYELDNGEQREYKRAITPSGATEYKIDEEIVTF 124
Query: 124 KRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
N+ V +FL+ QG V + + P E
Sbjct: 125 SEYCGSLQKENILVRARNFLVFQGDVETIASQSPLE 160
>DICTYBASE|DDB_G0291752 [details] [associations]
symbol:smc1 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0042770
"signal transduction in response to DNA damage" evidence=ISS]
[GO:0008280 "cohesin core heterodimer" evidence=ISS] [GO:0007064
"mitotic sister chromatid cohesion" evidence=ISS] [GO:0007052
"mitotic spindle organization" evidence=ISS] [GO:0003777
"microtubule motor activity" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0000075 "cell cycle checkpoint"
evidence=ISS] [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 dictyBase:DDB_G0291752 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GenomeReviews:CM000155_GR GO:GO:0007052
GO:GO:0006281 GO:GO:0003682 EMBL:AAFI02000182 GO:GO:0042770
GO:GO:0006310 GO:GO:0046982 GO:GO:0030261 GO:GO:0003777
GO:GO:0000075 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0008280 KO:K06636 OMA:NALVCET RefSeq:XP_629977.1
ProteinModelPortal:Q54E85 STRING:Q54E85 EnsemblProtists:DDB0219931
GeneID:8628307 KEGG:ddi:DDB_G0291752 InParanoid:Q54E85
Uniprot:Q54E85
Length = 1373
Score = 162 (62.1 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 45/159 (28%), Positives = 75/159 (47%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
M I + + FKSY I F ++F+ + G NG GKSNI+D I FVLG Q+R+
Sbjct: 1 MGISILKIQNFKSYKGNPLIGPF-KDFSCVIGPNGRGKSNIMDAIIFVLGHNSSQIRSTK 59
Query: 61 LQELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
L EL+ N VT + DNS ++ +N R+I I + ++Y +
Sbjct: 60 LNELV--NTHI-VTDKNNNEGGDNSTYVAINFNHQGNN-YRFSRKI-IGNGSQYFFEQTQ 114
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V+ ++ + +++ +F + QG V + P +
Sbjct: 115 VSAEQYQKHLKDIGIDIGTKNFFVFQGDVESIATQNPKQ 153
>ASPGD|ASPL0000036762 [details] [associations]
symbol:AN2963 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008278 "cohesin
complex" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET OrthoDB:EOG42VCQD
RefSeq:XP_660567.1 ProteinModelPortal:Q5B917 SMR:Q5B917
STRING:Q5B917 EnsemblFungi:CADANIAT00010118 GeneID:2874104
KEGG:ani:AN2963.2 Uniprot:Q5B917
Length = 1261
Score = 121 (47.7 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 8 LDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTLQELIYK 67
L FKSY + D F +I G NG+GKSN +D I FVLGI+ +R+ L++LIY+
Sbjct: 9 LYNFKSYKGHHTLLFGDAYFTSIIGPNGSGKSNSMDAISFVLGIKSSHLRSTNLRDLIYR 68
Score = 63 (27.2 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 104 RQISIPSNTRYMINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
R I+ + Y IN V ++ ++ + N+ + +FL+ QG V + + P +
Sbjct: 133 RSITSQGVSEYRINNRVVTAQQYNEALEAENILIKARNFLVFQGDVEAIASQSPKD 188
>WB|WBGene00001860 [details] [associations]
symbol:him-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0010165 "response to X-ray" evidence=IMP]
[GO:0009411 "response to UV" evidence=IMP] [GO:0008278 "cohesin
complex" evidence=ISS;IPI] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0009411 GO:GO:0002119 GO:GO:0003677
GO:GO:0006281 GO:GO:0040011 GO:GO:0000790 GO:GO:0006310
GO:GO:0040035 GO:GO:0030261 GO:GO:0010165 GO:GO:0007064
GO:GO:0008278 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
KO:K06636 OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:FO081198
RefSeq:NP_001040658.2 UniGene:Cel.5375 ProteinModelPortal:O01789
SMR:O01789 STRING:O01789 PaxDb:O01789 EnsemblMetazoa:F28B3.7a.1
EnsemblMetazoa:F28B3.7a.2 GeneID:172116 KEGG:cel:CELE_F28B3.7
UCSC:F28B3.7a.1 CTD:172116 WormBase:F28B3.7a InParanoid:O01789
NextBio:874073 ArrayExpress:O01789 Uniprot:O01789
Length = 1262
Score = 155 (59.6 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 44/159 (27%), Positives = 75/159 (47%)
Query: 3 IKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTLQ 62
+ ++ ++ FKSY + I F R F AI G NG+GKSN++D I FVLG + +R
Sbjct: 16 LHTLEIENFKSYKGKHTIGPFTR-FTAIIGPNGSGKSNLMDAISFVLGEKPSSLRVRKYA 74
Query: 63 ELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
+LI+ + K VT+ + SD K R ++ + ++++G +
Sbjct: 75 DLIHGAPINKPVAKKCRVTMNYKYSDGK----------VKAFTRGVN-NGTSEHLLDGQT 123
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
V S S+N+ + +FL+ QG + + P E
Sbjct: 124 VTSAAYSQEMESINIFIKARNFLVYQGAIENIAMKTPKE 162
>UNIPROTKB|F1NX72 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AADN02006734
IPI:IPI00577909 Ensembl:ENSGALT00000023006 Uniprot:F1NX72
Length = 1234
Score = 151 (58.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
Y+K +++ FKS+ I F R FN I G NG+GKSNI+D + FVL ++ +R ++
Sbjct: 3 YLKLLMVKDFKSWRGEQLIGPFMR-FNCIIGPNGSGKSNIMDAVSFVLCEKISNLRVKSV 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+ELI+ G+ + ASV + + D G E + VI S Y+ N
Sbjct: 62 RELIHGAHVGKPVSSTASVKIVYCEED------GEEKTFSRVIRDGCS-----EYIFNDK 110
Query: 120 SVNPKR-VSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
S+ +S+L + + V + LI QG V + KP E
Sbjct: 111 SITRSAYISEL-EKIGILVKARNCLIFQGTVESIAMKKPKE 150
>UNIPROTKB|F1NX73 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:AADN02006734
IPI:IPI00572844 Ensembl:ENSGALT00000023005 Uniprot:F1NX73
Length = 1238
Score = 151 (58.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
Y+K +++ FKS+ I F R FN I G NG+GKSNI+D + FVL ++ +R ++
Sbjct: 3 YLKLLMVKDFKSWRGEQLIGPFMR-FNCIIGPNGSGKSNIMDAVSFVLCEKISNLRVKSV 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGS 119
+ELI+ G+ + ASV + + D G E + VI S Y+ N
Sbjct: 62 RELIHGAHVGKPVSSTASVKIVYCEED------GEEKTFSRVIRDGCS-----EYIFNDK 110
Query: 120 SVNPKR-VSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
S+ +S+L + + V + LI QG V + KP E
Sbjct: 111 SITRSAYISEL-EKIGILVKARNCLIFQGTVESIAMKKPKE 150
>MGI|MGI:2154049 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=IDA]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IDA] [GO:0007126 "meiosis"
evidence=IPI] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030893 "meiotic cohesin complex" evidence=ISO;IDA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IDA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:2154049 GO:GO:0005524
GO:GO:0007126 GO:GO:0005654 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0034991
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK EMBL:AF303827
IPI:IPI00120490 RefSeq:NP_536718.1 UniGene:Mm.182737
ProteinModelPortal:Q920F6 SMR:Q920F6 STRING:Q920F6
PhosphoSite:Q920F6 PaxDb:Q920F6 PRIDE:Q920F6
Ensembl:ENSMUST00000023068 GeneID:140557 KEGG:mmu:140557
InParanoid:Q920F6 OrthoDB:EOG4RNB7M NextBio:369861 Bgee:Q920F6
CleanEx:MM_SMC1B Genevestigator:Q920F6
GermOnline:ENSMUSG00000022432 Uniprot:Q920F6
Length = 1248
Score = 143 (55.4 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 32/91 (35%), Positives = 56/91 (61%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
+++ ++++ FKS+ R I F R F I G NG+GKSN++D + FV+G + +R +
Sbjct: 3 HLELLLVENFKSWRGRQVIGPFKR-FTCIIGPNGSGKSNVMDALSFVMGEKTTNLRVKNI 61
Query: 62 QELIY--KNGQAGVTKASVTLTF--DNSDKK 88
QELI+ G+ + ASVT+ + D+ ++K
Sbjct: 62 QELIHGAHTGKPVSSSASVTIIYIEDSGEEK 92
>UNIPROTKB|F1SM58 [details] [associations]
symbol:F1SM58 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR024704 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005634 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 GeneTree:ENSGT00580000081569
EMBL:CU856016 EMBL:CU633534 Ensembl:ENSSSCT00000000014
Uniprot:F1SM58
Length = 1233
Score = 142 (55.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 46/163 (28%), Positives = 79/163 (48%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
+++ ++++ FKS+ R I F R F I G NG+GKSN++D + FV+G ++ +R +
Sbjct: 3 HLELLLVENFKSWRGRQVIGPF-RRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKNI 61
Query: 62 QELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVI---CRQISIPSNTRYMI 116
QELI+ G+ + ASV + + G E T +I C + N +
Sbjct: 62 QELIHGAHIGKPVSSSASVRIVYVEES------GEEKTFTRIIRGGCSEFHFDDNP---V 112
Query: 117 NGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
+ SS + +L + + V + L+ QG V + KP E
Sbjct: 113 SRSSY----IKEL-EKIGIIVKARNCLVFQGTVESISLKKPKE 150
>UNIPROTKB|C9IYK2 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR003395 Pfam:PF02463 EMBL:AC024221
HGNC:HGNC:14013 IPI:IPI00947202 SMR:C9IYK2 STRING:C9IYK2
Ensembl:ENST00000485645 Ensembl:ENST00000497311
HOGENOM:HOG000201987 Uniprot:C9IYK2
Length = 173
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 82 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 141
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKK 88
L LI+ + + + +V + F DK+
Sbjct: 142 LSVLIHNSDEHKDIQSCTVEVHFQKIIDKE 171
>UNIPROTKB|C9JJ64 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR003395 Pfam:PF02463 EMBL:AC024221
HGNC:HGNC:14013 HOGENOM:HOG000201987 IPI:IPI00946854
ProteinModelPortal:C9JJ64 SMR:C9JJ64 STRING:C9JJ64
Ensembl:ENST00000490207 ArrayExpress:C9JJ64 Bgee:C9JJ64
Uniprot:C9JJ64
Length = 180
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 28/90 (31%), Positives = 49/90 (54%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 82 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 141
Query: 61 LQELIYKNGQ-AGVTKASVTLTFDNS-DKK 88
L LI+ + + + +V + F DK+
Sbjct: 142 LSVLIHNSDEHKDIQSCTVEVHFQKIIDKE 171
>UNIPROTKB|C9JWF0 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR003395 Pfam:PF02463 EMBL:AC024221
HGNC:HGNC:14013 IPI:IPI00944900 ProteinModelPortal:C9JWF0
SMR:C9JWF0 STRING:C9JWF0 Ensembl:ENST00000465903
ArrayExpress:C9JWF0 Bgee:C9JWF0 Uniprot:C9JWF0
Length = 170
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 24/70 (34%), Positives = 41/70 (58%)
Query: 1 MYIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANT 60
+ I +V FKSY + F + F+ I G NG+GKSN++D + FV G + +++R+
Sbjct: 82 LMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKK 141
Query: 61 LQELIYKNGQ 70
L LI+ + +
Sbjct: 142 LSVLIHNSDE 151
>RGD|1308791 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10116 "Rattus norvegicus" [GO:0000775 "chromosome,
centromeric region" evidence=IEA;ISO] [GO:0000795 "synaptonemal
complex" evidence=ISO] [GO:0000800 "lateral element"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=IEA;ISO] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030893 "meiotic cohesin complex"
evidence=ISO] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA;ISO] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:1308791 GO:GO:0005524 GO:GO:0007126 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0000800 EMBL:CH473950 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 KO:K06636 GeneTree:ENSGT00580000081569 CTD:27127
OMA:QLYHNEK OrthoDB:EOG4RNB7M IPI:IPI00372956 RefSeq:NP_001123970.1
UniGene:Rn.56972 Ensembl:ENSRNOT00000044883 GeneID:300121
KEGG:rno:300121 NextBio:646377 Uniprot:D3ZE73
Length = 1247
Score = 140 (54.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 32/91 (35%), Positives = 56/91 (61%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
+++ ++++ FKS+ R I F R F I G NG+GKSN++D + FV+G + +R +
Sbjct: 3 HLELLLVENFKSWRGRQVIGPFKR-FTCIIGPNGSGKSNVMDALSFVMGEKTTNLRVKNI 61
Query: 62 QELIYKN--GQAGVTKASVTLTF--DNSDKK 88
QELI+ G+ + ASVT+ + D+ ++K
Sbjct: 62 QELIHGAHIGKPVSSSASVTIIYVEDSGEEK 92
>CGD|CAL0001481 [details] [associations]
symbol:SMC5 species:5476 "Candida albicans" [GO:0030915
"Smc5-Smc6 complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0071139 "resolution of recombination
intermediates" evidence=IEA] [GO:0000725 "recombinational repair"
evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003684 "damaged
DNA binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR027131 InterPro:IPR003395 CGD:CAL0001481 Pfam:PF02463
GO:GO:0005524 GO:GO:0007059 GO:GO:0071216 GO:GO:0036180
GO:GO:0003677 GO:GO:0009267 GO:GO:0030261 GO:GO:0036170
EMBL:AACQ01000131 EMBL:AACQ01000130 GO:GO:0009295 eggNOG:COG1196
PANTHER:PTHR19306:SF1 RefSeq:XP_713250.1 RefSeq:XP_713303.1
ProteinModelPortal:Q59UE8 STRING:Q59UE8 GeneID:3645087
GeneID:3645103 KEGG:cal:CaO19.2417 KEGG:cal:CaO19.9955
HOGENOM:HOG000247851 Uniprot:Q59UE8
Length = 1073
Score = 137 (53.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 43/159 (27%), Positives = 76/159 (47%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
+I+ + + F +Y + E N N I G NG+GKS ++ IC L + ++ L
Sbjct: 25 FIRKVRVWNFTTY-SYTEFN-LSPTLNMIIGPNGSGKSTLVASICIGLAGSINLIKRKNL 82
Query: 62 QELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSSV 121
+ +I K GQ K+SV +T +N YE + IVI R+ + + + +N
Sbjct: 83 KSMI-KTGQE---KSSVEITIEN---------YEGHSPIVIKREFTA-KESNWTVNNKRA 128
Query: 122 NPKRVSDLFSSVNLNVNNP-HFLIMQGRVTKVLNMKPHE 159
++ D+ + N+ ++N HFL Q RV + + P +
Sbjct: 129 TESKIKDIRTKFNIQLDNLCHFL-PQERVAEFAGLSPEK 166
>UNIPROTKB|Q59UE8 [details] [associations]
symbol:SMC5 "Potential nuclear DNA repair complex SMC
ATPase" species:237561 "Candida albicans SC5314" [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036170 "filamentous growth
of a population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR027131 InterPro:IPR003395 CGD:CAL0001481 Pfam:PF02463
GO:GO:0005524 GO:GO:0007059 GO:GO:0071216 GO:GO:0036180
GO:GO:0003677 GO:GO:0009267 GO:GO:0030261 GO:GO:0036170
EMBL:AACQ01000131 EMBL:AACQ01000130 GO:GO:0009295 eggNOG:COG1196
PANTHER:PTHR19306:SF1 RefSeq:XP_713250.1 RefSeq:XP_713303.1
ProteinModelPortal:Q59UE8 STRING:Q59UE8 GeneID:3645087
GeneID:3645103 KEGG:cal:CaO19.2417 KEGG:cal:CaO19.9955
HOGENOM:HOG000247851 Uniprot:Q59UE8
Length = 1073
Score = 137 (53.3 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 43/159 (27%), Positives = 76/159 (47%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
+I+ + + F +Y + E N N I G NG+GKS ++ IC L + ++ L
Sbjct: 25 FIRKVRVWNFTTY-SYTEFN-LSPTLNMIIGPNGSGKSTLVASICIGLAGSINLIKRKNL 82
Query: 62 QELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSSV 121
+ +I K GQ K+SV +T +N YE + IVI R+ + + + +N
Sbjct: 83 KSMI-KTGQE---KSSVEITIEN---------YEGHSPIVIKREFTA-KESNWTVNNKRA 128
Query: 122 NPKRVSDLFSSVNLNVNNP-HFLIMQGRVTKVLNMKPHE 159
++ D+ + N+ ++N HFL Q RV + + P +
Sbjct: 129 TESKIKDIRTKFNIQLDNLCHFL-PQERVAEFAGLSPEK 166
>POMBASE|SPAC14C4.02c [details] [associations]
symbol:smc5 "Smc5-6 complex SMC subunit Smc5"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0000935 "barrier septum" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0030915
"Smc5-Smc6 complex" evidence=IDA] [GO:0032153 "cell division site"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048478 "replication fork protection" evidence=IC]
InterPro:IPR027131 InterPro:IPR003395 PomBase:SPAC14C4.02c
Pfam:PF02463 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0032153
GO:GO:0044732 GO:GO:0000724 GO:GO:0048478 GO:GO:0000935
eggNOG:COG1196 GO:GO:0030915 PANTHER:PTHR19306:SF1 EMBL:AJ277543
PIR:T37687 RefSeq:NP_594907.2 IntAct:O13710 STRING:O13710
EnsemblFungi:SPAC14C4.02c.1 GeneID:2541587 OrthoDB:EOG48KVKB
NextBio:20802681 Uniprot:O13710
Length = 1076
Score = 136 (52.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 44/133 (33%), Positives = 65/133 (48%)
Query: 28 NAITGLNGTGKSNILDGICFVLGIQVKQV-RANTLQELIYKNGQAGVTKASVTLTFDNSD 86
N I G NGTGKS I+ IC LG K + RA +E I K G K + T+ +
Sbjct: 47 NLIIGPNGTGKSTIVSAICIGLGWPPKLLGRAKEAREFI-KYG-----KNTATIEIE--- 97
Query: 87 KKNCPIGYENDNTIVICRQISIPSNTRYMINGSSVNPKRVSDLFSSVNLNVNNP-HFLIM 145
+ Y +D T+ I RQIS ++ + IN + ++ L + N+ +NN HFL
Sbjct: 98 -----MKYRDDETVTITRQISQDKSSSFSINREACATSSITSLMDTFNVQLNNLCHFL-P 151
Query: 146 QGRVTKVLNMKPH 158
Q RV + + P+
Sbjct: 152 QDRVAEFAQLDPY 164
>UNIPROTKB|F1N6C8 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:DAAA02014929
EMBL:DAAA02014930 IPI:IPI00697785 ProteinModelPortal:F1N6C8
PRIDE:F1N6C8 Ensembl:ENSBTAT00000014005 Uniprot:F1N6C8
Length = 1235
Score = 133 (51.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 43/159 (27%), Positives = 72/159 (45%)
Query: 3 IKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTLQ 62
++ + ++ FKS+ R I F R F I G NG+GKSN++D + FV+G ++ +R +Q
Sbjct: 4 LEVLFVENFKSWRGRQVIGPFKR-FTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKNIQ 62
Query: 63 ELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMINGSS 120
ELI+ G+ + ASV + + G E R I + Y N +
Sbjct: 63 ELIHGAHIGKPVSSSASVKIVYLEES------GEEK----TFARTIR-GGCSEYSFNDNP 111
Query: 121 VNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
++ + + V + L+ QG V + KP E
Sbjct: 112 MSRSAYITELEKIGIIVKARNCLVFQGTVESISMKKPKE 150
>UNIPROTKB|Q8NDV3 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes protein
1B" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IDA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 Reactome:REACT_115566 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 Reactome:REACT_111183 GO:GO:0006310
GO:GO:0030261 GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196
SUPFAM:SSF75553 EMBL:AL008718 EMBL:AL021391 GO:GO:0030893
HOVERGEN:HBG039593 KO:K06636 EMBL:AJ504806 EMBL:BC126208
EMBL:AK125736 IPI:IPI00479260 IPI:IPI00807400 IPI:IPI00893258
RefSeq:NP_683515.3 UniGene:Hs.334176 ProteinModelPortal:Q8NDV3
SMR:Q8NDV3 STRING:Q8NDV3 PhosphoSite:Q8NDV3 DMDM:57015410
PaxDb:Q8NDV3 PRIDE:Q8NDV3 Ensembl:ENST00000357450
Ensembl:ENST00000404354 GeneID:27127 KEGG:hsa:27127 UCSC:uc003bgc.3
UCSC:uc003bgd.3 CTD:27127 GeneCards:GC22M045739 H-InvDB:HIX0027884
HGNC:HGNC:11112 HPA:HPA001500 MIM:608685 neXtProt:NX_Q8NDV3
PharmGKB:PA35962 OMA:QLYHNEK GenomeRNAi:27127 NextBio:49836
Bgee:Q8NDV3 CleanEx:HS_SMC1B Genevestigator:Q8NDV3
GermOnline:ENSG00000077935 Uniprot:Q8NDV3
Length = 1235
Score = 133 (51.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 29/83 (34%), Positives = 51/83 (61%)
Query: 2 YIKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTL 61
+++ ++++ FKS+ R I F R F I G NG+GKSN++D + FV+G ++ +R +
Sbjct: 3 HLELLLVENFKSWRGRQVIGPF-RRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKNI 61
Query: 62 QELIYKN--GQAGVTKASVTLTF 82
QELI+ G+ + ASV + +
Sbjct: 62 QELIHGAHIGKPISSSASVKIIY 84
>UNIPROTKB|F6V533 [details] [associations]
symbol:SMC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AAEX03007228
EMBL:AAEX03007229 EMBL:AAEX03007230 Ensembl:ENSCAFT00000001296
Uniprot:F6V533
Length = 1079
Score = 131 (51.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 44/162 (27%), Positives = 77/162 (47%)
Query: 3 IKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTLQ 62
++ ++++ FKS+ I F R F I G NG+GKSN++D + FV+G + +R +Q
Sbjct: 4 LEVLLVENFKSWRGHQVIGPF-RRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKNIQ 62
Query: 63 ELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVI---CRQISIPSNTRYMIN 117
ELI+ G+ + ASV + + G E T +I C + N ++
Sbjct: 63 ELIHGAHIGRPVSSSASVKIVYVEES------GEEKTFTRIIRGGCSEFHFDDNP---VS 113
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
S+ +++L + + V + L+ QG V + KP E
Sbjct: 114 RSAY----IAEL-EKIGIIVKARNCLVFQGTVESISMKKPKE 150
>UNIPROTKB|K7GL03 [details] [associations]
symbol:K7GL03 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004022 "alcohol dehydrogenase (NAD) activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002198 InterPro:IPR002424 InterPro:IPR020904
Pfam:PF00106 PRINTS:PR00080 PRINTS:PR01167 PROSITE:PS00061
InterPro:IPR016040 InterPro:IPR003395 Pfam:PF02463
Gene3D:3.40.50.720 GeneTree:ENSGT00580000081569 EMBL:CU695116
Ensembl:ENSSSCT00000034912 Uniprot:K7GL03
Length = 218
Score = 119 (46.9 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 37 GKSNILDGICFVLGIQVKQVRANTLQELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGY 94
GKSN++D I FVLG + +R TL++LI+ G+ +A V++ + G
Sbjct: 56 GKSNLMDAISFVLGEKTSNLRVKTLRDLIHGAPVGKPAANRAFVSMVYSEE-------GA 108
Query: 95 ENDNTIVICRQISIPSNTRYMINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLN 154
E D T ++ + ++ Y IN V S+ + + + +FL+ QG V +
Sbjct: 109 E-DRTFA---RVIVGGSSEYKINNKVVQLHEYSEELEKLGILIKARNFLVFQGAVESIAM 164
Query: 155 MKPHE 159
P E
Sbjct: 165 KNPKE 169
>UNIPROTKB|E2QRT5 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK
EMBL:AAEX03007228 EMBL:AAEX03007229 EMBL:AAEX03007230
RefSeq:XP_538328.2 Ensembl:ENSCAFT00000001296
Ensembl:ENSCAFT00000049571 GeneID:481207 KEGG:cfa:481207
NextBio:20856062 Uniprot:E2QRT5
Length = 1235
Score = 131 (51.2 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 44/162 (27%), Positives = 77/162 (47%)
Query: 3 IKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQVRANTLQ 62
++ ++++ FKS+ I F R F I G NG+GKSN++D + FV+G + +R +Q
Sbjct: 4 LEVLLVENFKSWRGHQVIGPF-RRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKNIQ 62
Query: 63 ELIYKN--GQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVI---CRQISIPSNTRYMIN 117
ELI+ G+ + ASV + + G E T +I C + N ++
Sbjct: 63 ELIHGAHIGRPVSSSASVKIVYVEES------GEEKTFTRIIRGGCSEFHFDDNP---VS 113
Query: 118 GSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKPHE 159
S+ +++L + + V + L+ QG V + KP E
Sbjct: 114 RSAY----IAEL-EKIGIIVKARNCLVFQGTVESISMKKPKE 150
>SGD|S000005394 [details] [associations]
symbol:SMC5 "Component of the SMC5-SMC6 complex" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0071139
"resolution of recombination intermediates" evidence=IMP]
[GO:0000725 "recombinational repair" evidence=IPI] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IDA;IMP] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0030915 "Smc5-Smc6
complex" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR027131 InterPro:IPR003395 SGD:S000005394
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 EMBL:BK006948
GO:GO:0003684 GO:GO:0016887 GO:GO:0003697 GO:GO:0000725
eggNOG:COG1196 GO:GO:0030915 PDB:3HTK PDBsum:3HTK GO:GO:0034500
PANTHER:PTHR19306:SF1 OMA:GMDPRNE GeneTree:ENSGT00550000074963
OrthoDB:EOG48KVKB EMBL:Z74776 PIR:S66717 RefSeq:NP_014608.1
ProteinModelPortal:Q08204 SMR:Q08204 DIP:DIP-1979N IntAct:Q08204
MINT:MINT-404105 STRING:Q08204 PaxDb:Q08204 EnsemblFungi:YOL034W
GeneID:854123 KEGG:sce:YOL034W CYGD:YOL034w HOGENOM:HOG000141775
EvolutionaryTrace:Q08204 NextBio:975828 Genevestigator:Q08204
GermOnline:YOL034W GO:GO:0071139 Uniprot:Q08204
Length = 1093
Score = 127 (49.8 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 48/153 (31%), Positives = 73/153 (47%)
Query: 8 LDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQV-RANTLQELIY 66
L F +Y T E N N I G NG+GKS + +C L + + + R+ +++ I
Sbjct: 47 LQDFVTY-TLTEFN-LSPSLNMIIGPNGSGKSTFVCAVCLGLAGKPEYIGRSKKVEDFI- 103
Query: 67 KNGQAGVTKASVTLTFDNSDKKNCPIGY--ENDNTIVICRQISIPSN-TRYMINGSSVNP 123
KNGQ V+K +TL NS I Y D TI I R I+ + Y+IN V+
Sbjct: 104 KNGQ-DVSKIEITLK--NSPNVT-DIEYIDARDETIKITRIITRSKRRSDYLINDYQVSE 159
Query: 124 KRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMK 156
V L + +N+ ++N + Q RV + +K
Sbjct: 160 SVVKTLVAQLNIQLDNLCQFLSQERVEEFARLK 192
>FB|FBgn0039164 [details] [associations]
symbol:CG5524 species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0030915 "Smc5-Smc6 complex" evidence=IEA] InterPro:IPR027132
InterPro:IPR003395 Pfam:PF02463 EMBL:AE014297 HSSP:P58301
eggNOG:COG1196 PANTHER:PTHR19306:SF2 GeneTree:ENSGT00550000074816
OMA:CANEANY EMBL:BT023747 RefSeq:NP_651228.1 UniGene:Dm.16547
SMR:Q9VCB8 IntAct:Q9VCB8 EnsemblMetazoa:FBtr0084573 GeneID:42876
KEGG:dme:Dmel_CG5524 UCSC:CG5524-RA FlyBase:FBgn0039164
InParanoid:Q9VCB8 OrthoDB:EOG42Z354 GenomeRNAi:42876 NextBio:831043
Uniprot:Q9VCB8
Length = 1122
Score = 120 (47.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 42/143 (29%), Positives = 72/143 (50%)
Query: 22 DFDREFNAITGLNGTGKSNILDGICFVLGIQVKQV-RANTLQELIYKNGQAGVTKASVTL 80
+F N + G NG+GKS ++ + L + RA+++Q+LI KNG+ T +++
Sbjct: 116 EFGPNINFLVGNNGSGKSAVITALALGLTSSARATNRASSIQKLI-KNGEVSAT---ISI 171
Query: 81 TFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYM--INGSSVNPKRVSDLFSSV---NL 135
T NS + + V+ RQI S+T + G SV+ K+VSD+ + +
Sbjct: 172 TLSNSGLRPFKADIFGPHLTVV-RQIRHSSSTYDLQDARGKSVS-KKVSDIRRMLLCFGI 229
Query: 136 NVNNPHFLIMQGRVTKVLN-MKP 157
NV NP F++ Q + L ++P
Sbjct: 230 NVENPIFVLNQEAAREFLKELEP 252
>TAIR|locus:2146107 [details] [associations]
symbol:SMC5 "AT5G15920" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR027131 InterPro:IPR003395 Pfam:PF02463 GO:GO:0009506
EMBL:CP002688 EMBL:AL391145 GO:GO:0007062 PANTHER:PTHR19306:SF1
OMA:GMDPRNE IPI:IPI00520383 PIR:T51375 RefSeq:NP_197096.1
UniGene:At.31737 ProteinModelPortal:Q9LFS8 SMR:Q9LFS8 STRING:Q9LFS8
PRIDE:Q9LFS8 EnsemblPlants:AT5G15920.1 GeneID:831449
KEGG:ath:AT5G15920 TAIR:At5g15920 HOGENOM:HOG000006187
InParanoid:Q9LFS8 PhylomeDB:Q9LFS8 ProtClustDB:CLSN2686110
ArrayExpress:Q9LFS8 Genevestigator:Q9LFS8 Uniprot:Q9LFS8
Length = 1053
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 33/131 (25%), Positives = 62/131 (47%)
Query: 28 NAITGLNGTGKSNILDGICFVLGIQVKQV-RANTLQELIYKNGQAGVTKASVTLTFDNSD 86
N + G NG+GKS+++ I LG + + + RA ++ + + +G K S+
Sbjct: 46 NLVIGPNGSGKSSLVCAIALCLGGEPQLLGRATSVGAYVKRGEDSGYVKISLR------- 98
Query: 87 KKNCPIGYENDNTIVICRQISIPSNTRYMINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQ 146
G + + I R+I + + +M NGS+V+ K + ++ N+ VNN + Q
Sbjct: 99 ------GNTREENLTIFRKIDTRNKSEWMFNGSTVSKKDIVEIIQKFNIQVNNLTQFLPQ 152
Query: 147 GRVTKVLNMKP 157
RV + + P
Sbjct: 153 DRVCEFAKLTP 163
>UNIPROTKB|C9J578 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR003395 Pfam:PF02463 EMBL:AC024221
HGNC:HGNC:14013 IPI:IPI00945252 ProteinModelPortal:C9J578
SMR:C9J578 STRING:C9J578 Ensembl:ENST00000472991
HOGENOM:HOG000031135 ArrayExpress:C9J578 Bgee:C9J578 Uniprot:C9J578
Length = 139
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/113 (24%), Positives = 55/113 (48%)
Query: 47 FVLGIQVKQVRANTLQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICR 104
FV G + +++R+ L LI+ + + + +V + F DK+ ++ + R
Sbjct: 3 FVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSR 62
Query: 105 QISIPSNTRYMINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
+ + Y I+G K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 63 TACRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 115
>UNIPROTKB|C9JVD8 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR003395 Pfam:PF02463 EMBL:AC024221
HGNC:HGNC:14013 HOGENOM:HOG000031135 IPI:IPI00947558
ProteinModelPortal:C9JVD8 SMR:C9JVD8 STRING:C9JVD8
Ensembl:ENST00000467468 ArrayExpress:C9JVD8 Bgee:C9JVD8
Uniprot:C9JVD8
Length = 119
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/113 (24%), Positives = 55/113 (48%)
Query: 47 FVLGIQVKQVRANTLQELIYKNGQ-AGVTKASVTLTFDNS-DKKNCPIGYENDNTIVICR 104
FV G + +++R+ L LI+ + + + +V + F DK+ ++ + R
Sbjct: 3 FVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSR 62
Query: 105 QISIPSNTRYMINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQGRVTKVLNMKP 157
+ + Y I+G K V +L S +++++ FLI+QG V ++ MKP
Sbjct: 63 TACRDNTSVYHISGKKKTFKDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKP 115
>POMBASE|SPCC5E4.06 [details] [associations]
symbol:smc6 "Smc5-6 complex SMC subunit Smc6"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0030915 "Smc5-Smc6 complex"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048478 "replication fork protection"
evidence=IC] InterPro:IPR027132 PomBase:SPCC5E4.06
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0000724
GO:GO:0048478 eggNOG:COG1196 GO:GO:0030915 EMBL:X80929
PANTHER:PTHR19306:SF2 PIR:T41457 RefSeq:NP_587906.1
ProteinModelPortal:P53692 IntAct:P53692 STRING:P53692 PRIDE:P53692
EnsemblFungi:SPCC5E4.06.1 GeneID:2539020 KEGG:spo:SPCC5E4.06
OMA:FVIGHNG OrthoDB:EOG486CMM NextBio:20800194 Uniprot:P53692
Length = 1140
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 42/149 (28%), Positives = 73/149 (48%)
Query: 18 VEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQV-RANTLQELIYKNGQAGVTKA 76
++IN F N + G NG+GKS IL G+ LG + RA ++ L+ K G+ +
Sbjct: 111 LKIN-FGPRINFVIGHNGSGKSAILTGLTICLGAKASNTNRAPNMKSLV-KQGK-NYARI 167
Query: 77 SVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMI---NGSSVNPKR--VSDLFS 131
SVT++ + + P Y +I I R I ++ Y + NG+ ++ KR + ++
Sbjct: 168 SVTIS-NRGFEAYQPEIY--GKSITIERTIRREGSSEYRLRSFNGTVISTKRDELDNICD 224
Query: 132 SVNLNVNNPHFLIMQGRVTKVL-NMKPHE 159
+ L ++NP ++ Q + L N P E
Sbjct: 225 HMGLQIDNPMNILTQDTARQFLGNSSPKE 253
>DICTYBASE|DDB_G0288993 [details] [associations]
symbol:smc6 "AAA ATPase domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030915 "Smc5-Smc6
complex" evidence=IEA;ISS] [GO:0006281 "DNA repair"
evidence=IEA;ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR027132 InterPro:IPR003395 dictyBase:DDB_G0288993
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GenomeReviews:CM000154_GR GO:GO:0006310 EMBL:AAFI02000129
GO:GO:0046982 eggNOG:COG1196 GO:GO:0030915 HSSP:P32908
RefSeq:XP_636454.1 ProteinModelPortal:Q54I56
EnsemblProtists:DDB0231143 GeneID:8626906 KEGG:ddi:DDB_G0288993
OMA:ISANIFT ProtClustDB:CLSZ2730382 PANTHER:PTHR19306:SF2
Uniprot:Q54I56
Length = 1185
Score = 113 (44.8 bits), Expect = 0.00012, P = 0.00012
Identities = 43/159 (27%), Positives = 77/159 (48%)
Query: 3 IKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQV-RANTL 61
I+S+ L+ F + ++ DF N I G NG+GKS +L + LG + R + L
Sbjct: 149 IESITLENFMCH-RHFKL-DFCSNVNFIAGENGSGKSAVLIALIVCLGAKAGFTNRGSKL 206
Query: 62 QELIYKNGQAGVTKASVTLTFDNSDKKNC-PIGYENDNTIVICRQISIPSNTRYMI---N 117
+L+ +A A +T+ N ++ P Y +++I R+IS ++ Y + N
Sbjct: 207 SDLV----KAETNTAVITVKLRNQGQEAFKPEKY--GKSVIIERRISRTGSSGYKVKDYN 260
Query: 118 GSSVNPK--RVSDLFSSVNLNVNNPHFLIMQGRVTKVLN 154
G +V+ K VS + N+ ++NP ++ Q + LN
Sbjct: 261 GKTVSDKFNDVSLILEQFNIQIDNPMSILTQDTSRQFLN 299
>TAIR|locus:2161163 [details] [associations]
symbol:MIM "AT5G61460" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA;IMP] [GO:0007062 "sister
chromatid cohesion" evidence=RCA;IMP] [GO:0010165 "response to
X-ray" evidence=IMP] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009555 "pollen development" evidence=RCA]
[GO:0016444 "somatic cell DNA recombination" evidence=RCA]
[GO:0016568 "chromatin modification" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0031048 "chromatin
silencing by small RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR027132 EMBL:CP002688 GenomeReviews:BA000015_GR
HSSP:P58301 GO:GO:0000724 GO:GO:0010165 GO:GO:0007062
eggNOG:COG1196 PANTHER:PTHR19306:SF2 OMA:CANEANY EMBL:AB016887
IPI:IPI00530052 RefSeq:NP_200954.1 UniGene:At.8630
ProteinModelPortal:Q9FII7 SMR:Q9FII7 STRING:Q9FII7 PaxDb:Q9FII7
PRIDE:Q9FII7 EnsemblPlants:AT5G61460.1 GeneID:836267
KEGG:ath:AT5G61460 TAIR:At5g61460 HOGENOM:HOG000030109
InParanoid:Q9FII7 PhylomeDB:Q9FII7 ProtClustDB:CLSN2686921
Genevestigator:Q9FII7 Uniprot:Q9FII7
Length = 1057
Score = 112 (44.5 bits), Expect = 0.00019, P = 0.00019
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 22 DFDREFNAITGLNGTGKSNILDGICFVLGIQVKQV-RANTLQELIYKNGQAGVTKASVTL 80
+F N ITG NG+GKS IL +C G + + RA TL++ I + G + A V +
Sbjct: 39 EFGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATLKDFI----KTGCSYAVVQV 94
Query: 81 TFDNSDKKNC-PIGYENDNTIVICRQISIPSNTRYMIN--GSSVNPKR--VSDLFSSVNL 135
NS + P Y I+I R+I+ + + + G V+ KR + +L N+
Sbjct: 95 EMKNSGEDAFKPEIY--GGVIIIERRITESATATVLKDYLGKKVSNKRDELRELVEHFNI 152
Query: 136 NVNNPHFLIMQGRVTKVLN 154
+V NP ++ Q + + L+
Sbjct: 153 DVENPCVVMSQDKSREFLH 171
>TAIR|locus:2160289 [details] [associations]
symbol:SMC6A "structural maintenance of chromosomes 6A"
species:3702 "Arabidopsis thaliana" [GO:0000155 "phosphorelay
sensor kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007059 "chromosome
segregation" evidence=ISS] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0007062 "sister chromatid cohesion" evidence=IMP] [GO:0010165
"response to X-ray" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0031047 "gene silencing by RNA"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR003661 InterPro:IPR027132 SMART:SM00388
InterPro:IPR003395 Pfam:PF02463 EMBL:CP002688 GO:GO:0016020
HSSP:P58301 GO:GO:0023014 GO:GO:0000724 GO:GO:0000155 GO:GO:0000160
GO:GO:0010165 GO:GO:0007062 EMBL:AB010070 PANTHER:PTHR19306:SF2
HOGENOM:HOG000030109 ProtClustDB:CLSN2686921 IPI:IPI00521865
RefSeq:NP_196383.1 UniGene:At.32690 ProteinModelPortal:Q9FLR5
SMR:Q9FLR5 PRIDE:Q9FLR5 EnsemblPlants:AT5G07660.1 GeneID:830659
KEGG:ath:AT5G07660 TAIR:At5g07660 InParanoid:Q9FLR5 OMA:INEMTIR
PhylomeDB:Q9FLR5 ArrayExpress:Q9FLR5 Genevestigator:Q9FLR5
Uniprot:Q9FLR5
Length = 1058
Score = 112 (44.5 bits), Expect = 0.00019, P = 0.00019
Identities = 41/152 (26%), Positives = 76/152 (50%)
Query: 8 LDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQV-RANTLQELIY 66
L+ F + + +EI +F N ITG NG+GKS IL +C G + + RA TL++ I
Sbjct: 28 LENFMCH-SNLEI-EFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATLKDFI- 84
Query: 67 KNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN--GSSVNPK 124
+ G + A V + N + D T++I R+IS ++ + + G ++ +
Sbjct: 85 ---KTGCSYALVYVELKNQGEDAFKPEIYGD-TLIIERRISDSTSLTVLKDHQGRKISSR 140
Query: 125 R--VSDLFSSVNLNVNNPHFLIMQGRVTKVLN 154
+ + +L N++V NP ++ Q + + L+
Sbjct: 141 KEELRELVEHYNIDVENPCVIMSQDKSREFLH 172
>WB|WBGene00016151 [details] [associations]
symbol:smc-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] InterPro:IPR027131
InterPro:IPR003395 Pfam:PF02463 GO:GO:0009792 GO:GO:0045132
eggNOG:COG1196 EMBL:FO080349 PANTHER:PTHR19306:SF1 OMA:GMDPRNE
GeneTree:ENSGT00550000074963 RefSeq:NP_494935.1
ProteinModelPortal:Q18237 SMR:Q18237 STRING:Q18237 PaxDb:Q18237
EnsemblMetazoa:C27A2.1 GeneID:173874 KEGG:cel:CELE_C27A2.1
UCSC:C27A2.1 CTD:173874 WormBase:C27A2.1 HOGENOM:HOG000017087
InParanoid:Q18237 NextBio:881489 Uniprot:Q18237
Length = 1076
Score = 112 (44.5 bits), Expect = 0.00019, P = 0.00019
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 28 NAITGLNGTGKSNILDGICFVLGIQVKQV-RANTLQELIYKNGQAGVTKASVTLTFDNSD 86
N I G NG+GKS+I+ GIC G K + R+ + E I + G T+ V + +D
Sbjct: 45 NMILGHNGSGKSSIICGICLACGGSPKSLGRSERIVEYI----RHGCTEGYVEIAI--AD 98
Query: 87 KKNCPIGYENDNTIVICRQISIPSNTRYMINGSSVNPKRVSDLFSSVNLNVNNPHFLIMQ 146
K+ P V+ I + +Y +N S+ ++DL N+ ++NP + Q
Sbjct: 99 KQKGPQ--------VVRLTIRVGEQPKYRLNDSATTQSEIADLRKHYNIQIDNPCAFLAQ 150
Query: 147 GRV 149
+V
Sbjct: 151 DKV 153
>CGD|CAL0003255 [details] [associations]
symbol:SMC6 species:5476 "Candida albicans" [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0030915 "Smc5-Smc6 complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0071139 "resolution of recombination
intermediates" evidence=IEA] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IEA]
InterPro:IPR027132 CGD:CAL0003255 EMBL:AACQ01000020
EMBL:AACQ01000016 eggNOG:COG1196 PANTHER:PTHR19306:SF2
RefSeq:XP_720891.1 RefSeq:XP_721404.1 RefSeq:XP_888781.1
ProteinModelPortal:Q5AGX1 STRING:Q5AGX1 GeneID:3637039
GeneID:3637516 GeneID:3704092 KEGG:cal:CaO19.13921
KEGG:cal:CaO19.6568 KEGG:cal:CaO19_6568 Uniprot:Q5AGX1
Length = 1128
Score = 109 (43.4 bits), Expect = 0.00067, P = 0.00067
Identities = 44/157 (28%), Positives = 76/157 (48%)
Query: 3 IKSMVLDGFKSYGTRVEINDFDREFNAITGLNGTGKSNILDGICFVLGIQVKQV-RANTL 61
I+ + L F + + E+ + N I G NG+GKS IL GI LG + R +T+
Sbjct: 106 IEKLTLKNFMCHDS-FELK-LGPQLNFIIGRNGSGKSAILTGISVGLGAKATDTNRGSTI 163
Query: 62 QELIYKNGQAGVTKASVTLTFDNSDKKNCPIGYENDNTIVICRQISIPSNTRYMIN---G 118
++LI K+G++ ++ +V L + SD P + I+I R++ + Y I G
Sbjct: 164 RDLI-KDGKS-TSRITVVLKNEGSDAYK-PDVF--GKKIIIERKLQRSGSNTYSIKNEAG 218
Query: 119 SSV-NPKRVSD-LFSSVNLNVNNPHFLIMQGRVTKVL 153
V N K V D + ++ ++NP + Q + + L
Sbjct: 219 KVVSNKKSVLDEILYKFSITIDNPLAFLSQDKAREFL 255
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 159 159 0.00091 106 3 11 22 0.37 32
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 138
No. of states in DFA: 535 (57 KB)
Total size of DFA: 127 KB (2082 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.17u 0.11s 15.28t Elapsed: 00:00:06
Total cpu time: 15.19u 0.11s 15.30t Elapsed: 00:00:06
Start: Thu Aug 15 15:01:22 2013 End: Thu Aug 15 15:01:28 2013
WARNINGS ISSUED: 1