Your job contains 1 sequence.
>psy17516
MNPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKY
LGSMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALRE
AWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFGGLWKESLGELSGGQRSL
VALSLVLAMLLFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSN
ANVIFRTKFVDGNSNVTRTVNRKN
The BLAST search returned 11 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17516
(264 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-105 - symbol:smc2 "structural mainte... 579 4.0e-60 2
DICTYBASE|DDB_G0284499 - symbol:smc2 "structural maintena... 585 8.1e-60 2
TAIR|locus:2167973 - symbol:SMC2 "AT5G62410" species:3702... 594 1.2e-59 2
UNIPROTKB|F1SP73 - symbol:F1SP73 "Uncharacterized protein... 572 4.5e-59 2
UNIPROTKB|F1SRP0 - symbol:SMC2 "Structural maintenance of... 572 5.0e-59 2
TAIR|locus:2079107 - symbol:ATSMC2 "AT3G47460" species:37... 614 6.4e-59 1
UNIPROTKB|D4A5Q2 - symbol:Smc2 "Structural maintenance of... 574 1.0e-58 2
UNIPROTKB|E2R7R8 - symbol:SMC2 "Structural maintenance of... 572 1.0e-58 2
UNIPROTKB|O95347 - symbol:SMC2 "Structural maintenance of... 572 1.1e-58 2
RGD|1305227 - symbol:Smc2 "structural maintenance of chro... 574 1.2e-58 2
MGI|MGI:106067 - symbol:Smc2 "structural maintenance of c... 570 3.5e-58 2
UNIPROTKB|F1MY41 - symbol:SMC2 "Structural maintenance of... 565 7.5e-58 2
UNIPROTKB|E1C610 - symbol:E1C610 "Structural maintenance ... 555 5.1e-57 2
UNIPROTKB|E1C612 - symbol:E1C612 "Uncharacterized protein... 555 5.1e-57 2
UNIPROTKB|E1C782 - symbol:E1C782 "Uncharacterized protein... 555 5.5e-57 2
UNIPROTKB|E1C611 - symbol:E1C611 "Structural maintenance ... 555 5.6e-57 2
UNIPROTKB|E1C614 - symbol:E1C614 "Uncharacterized protein... 555 1.2e-56 2
UNIPROTKB|Q90988 - symbol:SMC2 "Structural maintenance of... 552 3.1e-56 2
FB|FBgn0027783 - symbol:SMC2 "SMC2" species:7227 "Drosoph... 494 1.2e-52 2
ASPGD|ASPL0000004872 - symbol:smcB species:162425 "Emeric... 502 7.0e-47 1
SGD|S000001927 - symbol:SMC2 "Subunit of the condensin co... 474 5.5e-46 2
POMBASE|SPBP4H10.06c - symbol:cut14 "condensin complex su... 473 8.8e-44 1
CGD|CAL0000340 - symbol:SMC2 species:5476 "Candida albica... 454 3.3e-43 2
WB|WBGene00003367 - symbol:mix-1 species:6239 "Caenorhabd... 464 9.2e-43 1
UNIPROTKB|Q09591 - symbol:mix-1 "Mitotic chromosome and X... 464 9.2e-43 1
GENEDB_PFALCIPARUM|MAL13P1.96 - symbol:MAL13P1.96 "chromo... 423 1.6e-39 2
UNIPROTKB|Q8IED2 - symbol:MAL13P1.96 "Structural maintena... 423 1.6e-39 2
TIGR_CMR|CHY_1443 - symbol:CHY_1443 "chromosome segregati... 192 5.0e-17 2
UNIPROTKB|P51834 - symbol:smc "Chromosome partition prote... 214 4.2e-16 1
TIGR_CMR|BA_3986 - symbol:BA_3986 "chromosome segregation... 195 5.5e-16 2
UNIPROTKB|Q9X0R4 - symbol:smc "Chromosome partition prote... 211 8.5e-16 1
UNIPROTKB|Q71YL3 - symbol:smC "Chromosome partition prote... 190 9.8e-15 2
POMBASE|SPBC146.03c - symbol:cut3 "condensin complex subu... 177 3.0e-12 2
UNIPROTKB|Q97QG7 - symbol:smc "Chromosome partition prote... 180 1.2e-11 1
SGD|S000003610 - symbol:SMC3 "Subunit of the multiprotein... 148 1.6e-11 2
WB|WBGene00004874 - symbol:smc-4 species:6239 "Caenorhabd... 177 5.6e-11 1
UNIPROTKB|Q20060 - symbol:smc-4 "Structural maintenance o... 177 5.6e-11 1
DICTYBASE|DDB_G0276101 - symbol:smc3 "structural maintena... 145 8.6e-11 2
FB|FBgn0015391 - symbol:glu "gluon" species:7227 "Drosoph... 173 9.9e-11 2
UNIPROTKB|F2Z5G2 - symbol:SMC3 "Uncharacterized protein" ... 136 1.4e-10 3
UNIPROTKB|F1NEA6 - symbol:SMC3 "Uncharacterized protein" ... 139 1.5e-10 3
UNIPROTKB|F1NYB2 - symbol:SMC3 "Uncharacterized protein" ... 139 1.5e-10 3
UNIPROTKB|O97593 - symbol:SMC1A "Structural maintenance o... 157 2.5e-10 2
UNIPROTKB|E2QV07 - symbol:SMC1A "Structural maintenance o... 157 2.5e-10 2
UNIPROTKB|Q14683 - symbol:SMC1A "Structural maintenance o... 157 2.5e-10 2
UNIPROTKB|F2Z5A8 - symbol:LOC100523938 "Structural mainte... 157 2.5e-10 2
MGI|MGI:1344345 - symbol:Smc1a "structural maintenance of... 157 2.5e-10 2
RGD|61991 - symbol:Smc1a "structural maintenance of chrom... 157 2.5e-10 2
UNIPROTKB|Q9Z1M9 - symbol:Smc1a "Structural maintenance o... 157 2.5e-10 2
UNIPROTKB|I3LMC6 - symbol:LOC100523938 "Structural mainte... 157 2.5e-10 2
UNIPROTKB|A7Z065 - symbol:SMC3 "Structural maintenance of... 136 3.5e-10 3
UNIPROTKB|E2R7T4 - symbol:SMC3 "Uncharacterized protein" ... 136 3.5e-10 3
UNIPROTKB|Q9UQE7 - symbol:SMC3 "Structural maintenance of... 136 3.5e-10 3
UNIPROTKB|Q5R4K5 - symbol:SMC3 "Structural maintenance of... 136 3.5e-10 3
MGI|MGI:1339795 - symbol:Smc3 "structural maintenance of ... 136 3.5e-10 3
UNIPROTKB|D4A1B9 - symbol:Smc3 "Structural maintenance of... 136 3.5e-10 3
UNIPROTKB|Q10970 - symbol:smc "Chromosome partition prote... 169 5.6e-10 1
UNIPROTKB|F1SM58 - symbol:F1SM58 "Structural maintenance ... 169 5.8e-10 1
UNIPROTKB|O97594 - symbol:SMC3 "Structural maintenance of... 134 6.5e-10 3
ZFIN|ZDB-GENE-090506-9 - symbol:smc1a "structural mainten... 159 1.1e-09 2
ZFIN|ZDB-GENE-040426-57 - symbol:smc1al "structural maint... 159 1.1e-09 2
UNIPROTKB|O93308 - symbol:smc1a "Structural maintenance o... 155 1.5e-09 2
CGD|CAL0003745 - symbol:SMC4 species:5476 "Candida albica... 165 2.2e-09 1
UNIPROTKB|O93309 - symbol:smc3 "Structural maintenance of... 132 2.3e-09 3
DICTYBASE|DDB_G0286403 - symbol:smc4 "structural maintena... 164 2.6e-09 2
UNIPROTKB|E2QRT5 - symbol:SMC1B "Structural maintenance o... 161 5.0e-09 2
ASPGD|ASPL0000075987 - symbol:AN4597 species:162425 "Emer... 162 5.9e-09 1
RGD|62006 - symbol:Smc3 "structural maintenance of chromo... 125 6.2e-09 3
UNIPROTKB|P97690 - symbol:Smc3 "Structural maintenance of... 125 6.2e-09 3
ZFIN|ZDB-GENE-030131-3196 - symbol:smc3 "structural maint... 128 7.2e-09 3
SGD|S000004076 - symbol:SMC4 "Subunit of the condensin co... 157 7.7e-09 2
MGI|MGI:2154049 - symbol:Smc1b "structural maintenance of... 160 9.3e-09 2
RGD|1308791 - symbol:Smc1b "structural maintenance of chr... 158 1.0e-08 2
ASPGD|ASPL0000036762 - symbol:AN2963 species:162425 "Emer... 159 1.3e-08 2
UNIPROTKB|Q8NDV3 - symbol:SMC1B "Structural maintenance o... 158 1.3e-08 2
UNIPROTKB|G3X7C0 - symbol:SMC1A "Structural maintenance o... 142 2.1e-08 2
FB|FBgn0040283 - symbol:SMC1 "SMC1" species:7227 "Drosoph... 156 2.5e-08 3
UNIPROTKB|F1N6C8 - symbol:SMC1B "Structural maintenance o... 156 3.1e-08 2
TIGR_CMR|GSU_1130 - symbol:GSU_1130 "chromosome segregati... 156 3.5e-08 2
MGI|MGI:1917349 - symbol:Smc4 "structural maintenance of ... 155 3.6e-08 1
WB|WBGene00004873 - symbol:smc-3 species:6239 "Caenorhabd... 155 4.3e-08 2
POMBASE|SPBC29A10.04 - symbol:psm1 "mitotic cohesin compl... 146 4.5e-08 2
UNIPROTKB|F6V533 - symbol:SMC1B "Uncharacterized protein"... 152 4.6e-08 2
UNIPROTKB|Q9ERA5 - symbol:SMC4 "Structural maintenance of... 154 4.6e-08 1
WB|WBGene00001086 - symbol:dpy-27 species:6239 "Caenorhab... 159 4.7e-08 2
UNIPROTKB|P48996 - symbol:dpy-27 "Chromosome condensation... 159 4.7e-08 2
UNIPROTKB|Q81ZL2 - symbol:smc "Chromosome partition prote... 153 5.6e-08 1
TIGR_CMR|CBU_0540 - symbol:CBU_0540 "SMC family protein" ... 153 5.6e-08 1
FB|FBgn0015615 - symbol:Cap "Chromosome-associated protei... 154 5.7e-08 2
UNIPROTKB|F1SH51 - symbol:SMC4 "Structural maintenance of... 155 5.7e-08 2
POMBASE|SPAC10F6.09c - symbol:psm3 "mitotic cohesin compl... 131 6.4e-08 2
UNIPROTKB|F1MAD9 - symbol:Smc4 "Structural maintenance of... 152 8.2e-08 1
UNIPROTKB|F1NX72 - symbol:SMC1B "Structural maintenance o... 151 1.0e-07 1
UNIPROTKB|F1NX73 - symbol:SMC1B "Structural maintenance o... 151 1.0e-07 1
UNIPROTKB|F1NDN4 - symbol:SMC4 "Structural maintenance of... 148 1.1e-07 2
UNIPROTKB|F1NN18 - symbol:SMC4 "Uncharacterized protein" ... 148 1.1e-07 2
UNIPROTKB|F1P3C6 - symbol:SMC4 "Structural maintenance of... 148 1.2e-07 2
SGD|S000001886 - symbol:SMC1 "Subunit of the multiprotein... 147 1.7e-07 2
UNIPROTKB|E2RCX4 - symbol:SMC4 "Structural maintenance of... 151 2.0e-07 2
ZFIN|ZDB-GENE-020419-21 - symbol:smc4 "structural mainten... 146 2.1e-07 2
WARNING: Descriptions of 14 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-030131-105 [details] [associations]
symbol:smc2 "structural maintenance of chromosomes
2" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 ZFIN:ZDB-GENE-030131-105 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
PANTHER:PTHR18937:SF9 EMBL:BX548248 IPI:IPI00500731
Ensembl:ENSDART00000008616 ArrayExpress:F1R0P1 Bgee:F1R0P1
Uniprot:F1R0P1
Length = 1232
Score = 579 (208.9 bits), Expect = 4.0e-60, Sum P(2) = 4.0e-60
Identities = 113/168 (67%), Positives = 131/168 (77%)
Query: 92 KKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKD 151
KK IVE+D+AK+L+ IEELD+KK AL AW KVN DFGSIFS LLPG+ A+L+PP G
Sbjct: 1006 KKRIVENDKAKILETIEELDQKKNEALNVAWQKVNKDFGSIFSTLLPGANARLAPPEGCG 1065
Query: 152 ILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSH 211
+LDGLE VA G WKE+L ELSGGQR FKPAP+YILDEVDAALDLSH
Sbjct: 1066 VLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILAMLLFKPAPIYILDEVDAALDLSH 1125
Query: 212 TQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRT 259
TQNIGQML+ HF SQF++VSLK+GMF+NANV+F+TKFVDG S VTRT
Sbjct: 1126 TQNIGQMLRTHFTHSQFVVVSLKDGMFTNANVLFKTKFVDGISTVTRT 1173
Score = 76 (31.8 bits), Expect = 4.0e-60, Sum P(2) = 4.0e-60
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E ++ ++L+E +DKLER V+++A L E ++
Sbjct: 963 NPKEAGQRLKRLEETKDKLERNVNRRAMNMLSEAEERY 1000
Score = 37 (18.1 bits), Expect = 5.1e-56, Sum P(2) = 5.1e-56
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 5 EVTRKYQKLKEQR 17
E+T +KLKE+R
Sbjct: 202 EITPAMEKLKEER 214
Score = 37 (18.1 bits), Expect = 5.1e-56, Sum P(2) = 5.1e-56
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 14 KEQRDKLERTVDKKAQLSLRNEENQFKVG-AMVK 46
K K E T K+AQ+ L++ + + K A VK
Sbjct: 406 KNDISKAE-TEAKQAQMKLKHAQQELKTKQAQVK 438
>DICTYBASE|DDB_G0284499 [details] [associations]
symbol:smc2 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA;ISS] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0284499 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 EMBL:AAFI02000066 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HSSP:P32908 OMA:CQNGKIP RefSeq:XP_638528.1
ProteinModelPortal:Q54PK4 STRING:Q54PK4 PRIDE:Q54PK4
EnsemblProtists:DDB0219933 GeneID:8624621 KEGG:ddi:DDB_G0284499
ProtClustDB:CLSZ2430256 Uniprot:Q54PK4
Length = 1184
Score = 585 (211.0 bits), Expect = 8.1e-60, Sum P(2) = 8.1e-60
Identities = 115/178 (64%), Positives = 137/178 (76%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
E M KK I+E+D++K+ VI ELDEKK +LR W KVN DFGSIFS LLPG+ AKL PP
Sbjct: 1000 ELMEKKKIIENDKSKIEHVIRELDEKKNESLRTTWKKVNKDFGSIFSTLLPGTSAKLEPP 1059
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G++ L GLEV VAFG +WKE+L ELSGGQ+ FKPAP+YILDE+DAAL
Sbjct: 1060 EGQNELFGLEVKVAFGDVWKETLSELSGGQKSLLALSLILSLLLFKPAPMYILDEIDAAL 1119
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTV-NRKN 264
DLSHTQNIG MLK+HF +SQFI+VSLKEGMF+NANV+F TKF+DG S V RTV N+K+
Sbjct: 1120 DLSHTQNIGMMLKQHFTSSQFIVVSLKEGMFTNANVLFETKFIDGVSKVHRTVFNKKD 1177
Score = 66 (28.3 bits), Expect = 8.1e-60, Sum P(2) = 8.1e-60
Identities = 10/39 (25%), Positives = 24/39 (61%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
+P + +Y KL+E+++KL +T+++K E +++
Sbjct: 961 DPSKANSEYIKLQEEQEKLSKTINRKVMSMFEKAEQEYQ 999
>TAIR|locus:2167973 [details] [associations]
symbol:SMC2 "AT5G62410" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000796 "condensin
complex" evidence=ISS] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0031047 "gene silencing by RNA" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051607 "defense
response to virus" evidence=RCA] [GO:0051726 "regulation of cell
cycle" evidence=RCA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AB015469 EMBL:AB019235 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:AF271730 EMBL:AF271731 EMBL:AF306547
IPI:IPI00534765 RefSeq:NP_201047.1 UniGene:At.19029 HSSP:P32908
ProteinModelPortal:Q9C5Y4 SMR:Q9C5Y4 STRING:Q9C5Y4 PaxDb:Q9C5Y4
PRIDE:Q9C5Y4 EnsemblPlants:AT5G62410.1 GeneID:836362
KEGG:ath:AT5G62410 TAIR:At5g62410 HOGENOM:HOG000163792
InParanoid:Q9C5Y4 OMA:CQNGKIP PhylomeDB:Q9C5Y4
ProtClustDB:CLSN2685173 Genevestigator:Q9C5Y4 Uniprot:Q9C5Y4
Length = 1175
Score = 594 (214.2 bits), Expect = 1.2e-59, Sum P(2) = 1.2e-59
Identities = 115/174 (66%), Positives = 137/174 (78%)
Query: 90 MTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAG 149
++KK+ +E+D++K+ KVIEELDEKKK L+ W+KVN DFGSIFS LLPG+ AKL PP
Sbjct: 1000 ISKKNTIENDKSKITKVIEELDEKKKETLKVTWVKVNQDFGSIFSTLLPGTMAKLEPPED 1059
Query: 150 KDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDL 209
+ LDGLEV VAFG +WK+SL ELSGGQR FKPAPLYILDEVDAALDL
Sbjct: 1060 GNFLDGLEVRVAFGKVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDL 1119
Query: 210 SHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRK 263
SHTQNIG+M++ HF SQFI+VSLKEGMF+NANV+FRTKFVDG S V RTV ++
Sbjct: 1120 SHTQNIGRMIRAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQ 1173
Score = 55 (24.4 bits), Expect = 1.2e-59, Sum P(2) = 1.2e-59
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
+P+ K +KL+ + LE+ V+KK E+++
Sbjct: 959 DPYVAREKLEKLQSDQSGLEKRVNKKVMAMFEKAEDEY 996
Score = 37 (18.1 bits), Expect = 9.2e-58, Sum P(2) = 9.2e-58
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLS-LRNEENQFKVGAMVKAPLKTLLFIS-MKKYL 61
HE+ +KL++++ + + + A+L LR F+ K +L + MK L
Sbjct: 201 HEILPALEKLRKEKSQYMQWANGNAELDRLRRFCIAFEYVQAEKIRDNAVLGVGEMKAKL 260
Query: 62 GSMSSFSVK 70
G + + + K
Sbjct: 261 GKIDAETEK 269
>UNIPROTKB|F1SP73 [details] [associations]
symbol:F1SP73 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:WIASERQ
Ensembl:ENSSSCT00000005947 Uniprot:F1SP73
Length = 1169
Score = 572 (206.4 bits), Expect = 4.5e-59, Sum P(2) = 4.5e-59
Identities = 113/177 (63%), Positives = 132/177 (74%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D++K+L IE+LD+KK AL AW KVN DFGSIFS LLPG+ A L+PP
Sbjct: 978 DLMKKKRIVENDKSKILATIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPP 1037
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G+ +LDGLE VA G WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1038 EGQTVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAAL 1097
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRKN 264
DLSHTQNIGQML+ HF SQFI+VSLKEGMF+NANV+F+TKFVDG S V R +N
Sbjct: 1098 DLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTVARFTQCQN 1154
Score = 72 (30.4 bits), Expect = 4.5e-59, Sum P(2) = 4.5e-59
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E +++ QKL+E ++KL R V+ +A L E ++
Sbjct: 939 NPKEASQRLQKLEEMKEKLGRNVNMRAMNVLTEAEERY 976
Score = 42 (19.8 bits), Expect = 6.4e-56, Sum P(2) = 6.4e-56
Identities = 15/64 (23%), Positives = 34/64 (53%)
Query: 8 RKYQKLKEQRDKLERTVDKKAQLSLRNEENQFK-VGAMVKAPLKTLLFISMKKYLGSMSS 66
R ++LKE +DK+ + ++ + E+ + K G ++++ L+ L + + S S+
Sbjct: 244 RSAEELKEMQDKILKLQEEXSHEIEELEKRKDKETGGILRS-LEDALAEAQRINTKSQSA 302
Query: 67 FSVK 70
F +K
Sbjct: 303 FDLK 306
Score = 39 (18.8 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
Y K +E+ D L++ +++ + +E Q K
Sbjct: 716 YHKQQEELDALKKIIEESEETLKNTKEIQKK 746
Score = 38 (18.4 bits), Expect = 1.7e-55, Sum P(2) = 1.7e-55
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 11 QKLKEQRDKLERTVDKKAQLS 31
+KL + +K E ++K+ QLS
Sbjct: 452 KKLNYEENKEESLLEKRRQLS 472
Score = 37 (18.1 bits), Expect = 2.2e-55, Sum P(2) = 2.2e-55
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNE 35
+ K+Q+LK+ +D+L R + + Q +L E
Sbjct: 652 ILTKFQELKDVQDEL-RIKENELQ-ALEEE 679
>UNIPROTKB|F1SRP0 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:CU861938 Ensembl:ENSSSCT00000005946 Uniprot:F1SRP0
Length = 1191
Score = 572 (206.4 bits), Expect = 5.0e-59, Sum P(2) = 5.0e-59
Identities = 113/177 (63%), Positives = 132/177 (74%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D++K+L IE+LD+KK AL AW KVN DFGSIFS LLPG+ A L+PP
Sbjct: 1000 DLMKKKRIVENDKSKILATIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPP 1059
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G+ +LDGLE VA G WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1060 EGQTVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAAL 1119
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRKN 264
DLSHTQNIGQML+ HF SQFI+VSLKEGMF+NANV+F+TKFVDG S V R +N
Sbjct: 1120 DLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTVARFTQCQN 1176
Score = 72 (30.4 bits), Expect = 5.0e-59, Sum P(2) = 5.0e-59
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E +++ QKL+E ++KL R V+ +A L E ++
Sbjct: 961 NPKEASQRLQKLEEMKEKLGRNVNMRAMNVLTEAEERY 998
Score = 40 (19.1 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 5 EVTRKYQKLKEQR 17
E+T QKLKE+R
Sbjct: 202 EITPTIQKLKEER 214
Score = 40 (19.1 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGS 63
E +K + L + ++LE+ DK+ LR+ E+ + ++ F KK L S
Sbjct: 269 ENDKKIKALSHEIEELEKRKDKETGGILRSLEDALAEAQRINTKSQSA-FDLKKKNLAS 326
Score = 39 (18.8 bits), Expect = 1.5e-55, Sum P(2) = 1.5e-55
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
Y K +E+ D L++ +++ + +E Q K
Sbjct: 737 YHKQQEELDALKKIIEESEETLKNTKEIQKK 767
Score = 38 (18.4 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 11 QKLKEQRDKLERTVDKKAQLS 31
+KL + +K E ++K+ QLS
Sbjct: 466 KKLNYEENKEESLLEKRRQLS 486
Score = 37 (18.1 bits), Expect = 2.4e-55, Sum P(2) = 2.4e-55
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNE 35
+ K+Q+LK+ +D+L R + + Q +L E
Sbjct: 673 ILTKFQELKDVQDEL-RIKENELQ-ALEEE 700
>TAIR|locus:2079107 [details] [associations]
symbol:ATSMC2 "AT3G47460" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005694 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AL096860 EMBL:AL132955 UniGene:At.35803
UniGene:At.71101 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HSSP:P32908 HOGENOM:HOG000163792
ProtClustDB:CLSN2685173 IPI:IPI00530229 PIR:T45706
RefSeq:NP_190330.1 ProteinModelPortal:Q9SN90 SMR:Q9SN90
STRING:Q9SN90 PaxDb:Q9SN90 PRIDE:Q9SN90 EnsemblPlants:AT3G47460.1
GeneID:823900 KEGG:ath:AT3G47460 TAIR:At3g47460 InParanoid:Q9SN90
OMA:WIASERQ PhylomeDB:Q9SN90 Genevestigator:Q9SN90 Uniprot:Q9SN90
Length = 1171
Score = 614 (221.2 bits), Expect = 6.4e-59, P = 6.4e-59
Identities = 136/266 (51%), Positives = 172/266 (64%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAM-----VKAPLKTLLFISMK 58
+EVTR + K K+++ V+K ++ +E+ F G + P K ++
Sbjct: 910 NEVTRMEMEHKNCSVKVDKLVEKHTWIT--SEKRLFGNGGTDYDFESRDPHKARE--ELE 965
Query: 59 KYLGSMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIAL 118
+ SS +V V A MTKK+I+E+D++K+ KVIEELDEKKK L
Sbjct: 966 RLQTDQSSLEKRVNKKVTAMFEKAEDEYNALMTKKNIIETDKSKIKKVIEELDEKKKETL 1025
Query: 119 REAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFGGLWKESLGELSGGQR 178
+ W+KVN DFGSIFS LLPG+ +KL PP G LDGLEV VAFG +WK+SL ELSGGQR
Sbjct: 1026 KVTWVKVNQDFGSIFSTLLPGTMSKLEPPEGGTFLDGLEVRVAFGDVWKQSLSELSGGQR 1085
Query: 179 XXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMF 238
FKPAP+YILDEVDAALDLSHTQNIG+M+K HF SQFI+VSLKEGMF
Sbjct: 1086 SLLALSLILALLLFKPAPIYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLKEGMF 1145
Query: 239 SNANVIFRTKFVDGNSNVTRTVNRKN 264
SNA+V+FRTKFVDG S V RTV +++
Sbjct: 1146 SNADVLFRTKFVDGVSTVQRTVTKQS 1171
>UNIPROTKB|D4A5Q2 [details] [associations]
symbol:Smc2 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 RGD:1305227 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
CTD:10592 OrthoDB:EOG49S65K IPI:IPI00950982 RefSeq:NP_001102136.2
Ensembl:ENSRNOT00000066226 GeneID:362519 KEGG:rno:362519
ArrayExpress:D4A5Q2 Uniprot:D4A5Q2
Length = 1191
Score = 574 (207.1 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 113/177 (63%), Positives = 132/177 (74%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D++K+L IE+LD+KK AL AW KVN DFGSIFS LLPG+ A L+PP
Sbjct: 1000 DLMKKKRIVENDKSKILATIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPP 1059
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G+ +LDGLE VA G WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1060 EGQTVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAAL 1119
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRKN 264
DLSHTQNIGQML+ HF SQFI+VSLKEGMF+NANV+F+TKFVDG S V R +N
Sbjct: 1120 DLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTVARFTQSQN 1176
Score = 67 (28.6 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E ++ QKL+E ++KL R V+ +A L E ++
Sbjct: 961 NPKEAGQRLQKLQEVKEKLGRNVNMRAMNVLTEAEERY 998
Score = 45 (20.9 bits), Expect = 2.1e-56, Sum P(2) = 2.1e-56
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
Y K +E+ D L++T+++ + +E Q K
Sbjct: 738 YHKQQEELDALKKTIEESEETLKNTKEIQKK 768
Score = 43 (20.2 bits), Expect = 3.4e-56, Sum P(2) = 3.4e-56
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGS 63
E +K + L + ++LE+ DK+ LR+ E+ F V ++ F KK L S
Sbjct: 269 ENEKKIKALNCEIEELEKRKDKETGGILRSLEDAFAEAQRVNTKSQSA-FDLKKKNLAS 326
Score = 40 (19.1 bits), Expect = 7.1e-56, Sum P(2) = 7.1e-56
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 5 EVTRKYQKLKEQR 17
E+T QKLKE+R
Sbjct: 202 EITPTIQKLKEER 214
>UNIPROTKB|E2R7R8 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:AAEX03008008 Ensembl:ENSCAFT00000004208 Uniprot:E2R7R8
Length = 1191
Score = 572 (206.4 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 113/177 (63%), Positives = 132/177 (74%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D++K+L IE+LD+KK AL AW KVN DFGSIFS LLPG+ A L+PP
Sbjct: 1000 DLMKKKRIVENDKSKILATIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPP 1059
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G+ +LDGLE VA G WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1060 EGQTVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAAL 1119
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRKN 264
DLSHTQNIGQML+ HF SQFI+VSLKEGMF+NANV+F+TKFVDG S V R +N
Sbjct: 1120 DLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTVARFTQCQN 1176
Score = 69 (29.3 bits), Expect = 1.0e-58, Sum P(2) = 1.0e-58
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E ++ QKL+E ++KL R V+ +A L E ++
Sbjct: 961 NPKEAGQRLQKLQEMKEKLGRNVNMRAMNVLTEAEERY 998
Score = 45 (20.9 bits), Expect = 3.5e-56, Sum P(2) = 3.5e-56
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
Y K +E+ D L++T+++ + +E Q K
Sbjct: 738 YHKQQEELDALKKTIEESEETLKNTKEIQKK 768
Score = 40 (19.1 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 5 EVTRKYQKLKEQR 17
E+T QKLKE+R
Sbjct: 202 EITPTIQKLKEER 214
Score = 37 (18.1 bits), Expect = 2.4e-55, Sum P(2) = 2.4e-55
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 11 QKLKEQRDKLERTVDKKAQLS 31
+KL + +K E ++K+ QLS
Sbjct: 466 KKLNYEENKEEGLLEKRRQLS 486
Score = 36 (17.7 bits), Expect = 3.1e-55, Sum P(2) = 3.1e-55
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNE 35
+ K+Q+LK +D+L R + + Q SL E
Sbjct: 674 ILTKFQELKNVQDEL-RIKENELQ-SLDEE 701
>UNIPROTKB|O95347 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0010032 "meiotic chromosome condensation"
evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0007076 "mitotic chromosome condensation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000793
"condensed chromosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 GO:GO:0006281
GO:GO:0006310 EMBL:CH471105 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HOGENOM:HOG000228249 OMA:CQNGKIP
CTD:10592 HOVERGEN:HBG106605 EMBL:AF092563 EMBL:AL833191
EMBL:AL161791 EMBL:AL354938 EMBL:BC130385 EMBL:AF113673
EMBL:BN000163 IPI:IPI00007927 IPI:IPI00232806 RefSeq:NP_001036015.1
RefSeq:NP_001036016.1 RefSeq:NP_001252531.1 RefSeq:NP_006435.2
UniGene:Hs.119023 ProteinModelPortal:O95347 SMR:O95347
DIP:DIP-35422N IntAct:O95347 MINT:MINT-1161754 STRING:O95347
PhosphoSite:O95347 PaxDb:O95347 PRIDE:O95347
Ensembl:ENST00000286398 Ensembl:ENST00000303219
Ensembl:ENST00000374787 Ensembl:ENST00000374793
Ensembl:ENST00000493955 GeneID:10592 KEGG:hsa:10592 UCSC:uc004bbv.3
GeneCards:GC09P106856 H-InvDB:HIX0008250 HGNC:HGNC:14011 MIM:605576
neXtProt:NX_O95347 PharmGKB:PA37833 InParanoid:O95347
OrthoDB:EOG49S65K ChiTaRS:SMC2 GenomeRNAi:10592 NextBio:40225
ArrayExpress:O95347 Bgee:O95347 CleanEx:HS_SMC2
Genevestigator:O95347 GermOnline:ENSG00000136824 Uniprot:O95347
Length = 1197
Score = 572 (206.4 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 113/177 (63%), Positives = 132/177 (74%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D++K+L IE+LD+KK AL AW KVN DFGSIFS LLPG+ A L+PP
Sbjct: 1000 DLMKKKRIVENDKSKILTTIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPP 1059
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G+ +LDGLE VA G WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1060 EGQTVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAAL 1119
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRKN 264
DLSHTQNIGQML+ HF SQFI+VSLKEGMF+NANV+F+TKFVDG S V R +N
Sbjct: 1120 DLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTVARFTQCQN 1176
Score = 69 (29.3 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E ++ QKL+E ++KL R V+ +A L E ++
Sbjct: 961 NPKEAGQRLQKLQEMKEKLGRNVNMRAMNVLTEAEERY 998
Score = 45 (20.9 bits), Expect = 3.6e-56, Sum P(2) = 3.6e-56
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
Y K +E+ D L++T+++ + +E Q K
Sbjct: 738 YHKQQEELDALKKTIEESEETLKNTKEIQRK 768
Score = 40 (19.1 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 5 EVTRKYQKLKEQR 17
E+T QKLKE+R
Sbjct: 202 EITPTIQKLKEER 214
Score = 38 (18.4 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 11 QKLKEQRDKLERTVDKKAQLS 31
+KL + +K E ++K+ QLS
Sbjct: 466 KKLNYEENKEESLLEKRRQLS 486
Score = 38 (18.4 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEEN 37
E +K + L + ++LE+ DK+ LR+ E+
Sbjct: 269 ENDKKIKALNHEIEELEKRKDKETGGILRSLED 301
Score = 36 (17.7 bits), Expect = 3.2e-55, Sum P(2) = 3.2e-55
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 6 VTRKYQKLKEQRDKL 20
+ K+Q+LK+ +D+L
Sbjct: 674 ILTKFQELKDVQDEL 688
Score = 36 (17.7 bits), Expect = 3.2e-55, Sum P(2) = 3.2e-55
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 1 MNPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAM 44
M E R+ ++LK+ + KL+ K S + +E Q +V A+
Sbjct: 780 MKNAEAERE-RELKDAQKKLDCAKTKADASSKKMKEKQQEVEAI 822
>RGD|1305227 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=ISO] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000796 "condensin complex" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA;ISO] [GO:0010032
"meiotic chromosome condensation" evidence=ISO] [GO:0045132
"meiotic chromosome segregation" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051383 "kinetochore
organization" evidence=ISO] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 RGD:1305227 GO:GO:0005524
GO:GO:0005737 GO:GO:0006281 GO:GO:0006310 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
PANTHER:PTHR18937:SF9 IPI:IPI00358733 PRIDE:D4AB57
Ensembl:ENSRNOT00000030563 UCSC:RGD:1305227 ArrayExpress:D4AB57
Uniprot:D4AB57
Length = 1230
Score = 574 (207.1 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 113/177 (63%), Positives = 132/177 (74%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D++K+L IE+LD+KK AL AW KVN DFGSIFS LLPG+ A L+PP
Sbjct: 1000 DLMKKKRIVENDKSKILATIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPP 1059
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G+ +LDGLE VA G WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1060 EGQTVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAAL 1119
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRKN 264
DLSHTQNIGQML+ HF SQFI+VSLKEGMF+NANV+F+TKFVDG S V R +N
Sbjct: 1120 DLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTVARFTQSQN 1176
Score = 67 (28.6 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E ++ QKL+E ++KL R V+ +A L E ++
Sbjct: 961 NPKEAGQRLQKLQEVKEKLGRNVNMRAMNVLTEAEERY 998
Score = 45 (20.9 bits), Expect = 2.5e-56, Sum P(2) = 2.5e-56
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
Y K +E+ D L++T+++ + +E Q K
Sbjct: 738 YHKQQEELDALKKTIEESEETLKNTKEIQKK 768
Score = 43 (20.2 bits), Expect = 4.1e-56, Sum P(2) = 4.1e-56
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGS 63
E +K + L + ++LE+ DK+ LR+ E+ F V ++ F KK L S
Sbjct: 269 ENEKKIKALNCEIEELEKRKDKETGGILRSLEDAFAEAQRVNTKSQSA-FDLKKKNLAS 326
Score = 40 (19.1 bits), Expect = 8.5e-56, Sum P(2) = 8.5e-56
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 5 EVTRKYQKLKEQR 17
E+T QKLKE+R
Sbjct: 202 EITPTIQKLKEER 214
>MGI|MGI:106067 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=ISO]
[GO:0000793 "condensed chromosome" evidence=ISO;IDA] [GO:0000796
"condensin complex" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=ISO] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:106067 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0006281 EMBL:CH466565
GO:GO:0006310 GO:GO:0045132 GO:GO:0000793 GO:GO:0007076
GO:GO:0051383 GO:GO:0000228 GO:GO:0000796 GO:GO:0010032
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
OMA:CQNGKIP CTD:10592 HOVERGEN:HBG106605 OrthoDB:EOG49S65K
EMBL:AJ534939 EMBL:AK013109 EMBL:AK019977 EMBL:AL732619
EMBL:BC094380 EMBL:U42385 IPI:IPI00987134 RefSeq:NP_032043.3
UniGene:Mm.2999 PDB:3L51 PDBsum:3L51 ProteinModelPortal:Q8CG48
SMR:Q8CG48 IntAct:Q8CG48 STRING:Q8CG48 PhosphoSite:Q8CG48
PaxDb:Q8CG48 PRIDE:Q8CG48 Ensembl:ENSMUST00000102915
Ensembl:ENSMUST00000117280 GeneID:14211 KEGG:mmu:14211
InParanoid:Q52KE9 EvolutionaryTrace:Q8CG48 NextBio:285461
Bgee:Q8CG48 CleanEx:MM_SMC2 Genevestigator:Q8CG48
GermOnline:ENSMUSG00000028312 Uniprot:Q8CG48
Length = 1191
Score = 570 (205.7 bits), Expect = 3.5e-58, Sum P(2) = 3.5e-58
Identities = 112/171 (65%), Positives = 130/171 (76%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D++K+L IE+LD+KK AL AW KVN DFGSIFS LLPG+ A L+PP
Sbjct: 1000 DLMKKKRIVENDKSKILATIEDLDQKKNQALNIAWQKVNKDFGSIFSTLLPGANAMLAPP 1059
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G+ +LDGLE VA G WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1060 EGQTVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAAL 1119
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
DLSHTQNIGQML+ HF SQFI+VSLKEGMF+NANV+F+TKFVDG S V R
Sbjct: 1120 DLSHTQNIGQMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTVAR 1170
Score = 66 (28.3 bits), Expect = 3.5e-58, Sum P(2) = 3.5e-58
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E ++ QKL+E ++KL R V+ +A L E ++
Sbjct: 961 NPKEAGQRLQKLQEVKEKLGRNVNLRAMNVLTEAEERY 998
Score = 44 (20.5 bits), Expect = 7.3e-56, Sum P(2) = 7.3e-56
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
Y K +E+ D L++T+++ + +E Q K
Sbjct: 738 YHKQQEELDALKKTIEESEETLKSTKEIQKK 768
Score = 40 (19.1 bits), Expect = 1.9e-55, Sum P(2) = 1.9e-55
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 5 EVTRKYQKLKEQR 17
E+T QKLKE+R
Sbjct: 202 EITPTIQKLKEER 214
Score = 38 (18.4 bits), Expect = 3.1e-55, Sum P(2) = 3.1e-55
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 11 QKLKEQRDKLERTVDKKAQLS 31
+KL + +K E+ ++K QLS
Sbjct: 466 KKLNYEENKEEKLLEKHRQLS 486
Score = 38 (18.4 bits), Expect = 3.1e-55, Sum P(2) = 3.1e-55
Identities = 9/37 (24%), Positives = 22/37 (59%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKV 41
E+ ++ Q + Q + ++ + A+ +L+N E+Q K+
Sbjct: 874 ELMKQKQIITAQDNIIKDKCAEVAKHNLQNNESQLKI 910
Score = 38 (18.4 bits), Expect = 3.1e-55, Sum P(2) = 3.1e-55
Identities = 25/105 (23%), Positives = 44/105 (41%)
Query: 1 MNPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKY 60
M E R+ ++LK+ + KL+ K S + +E Q +V A+ TL +K+
Sbjct: 780 MKNAEAERE-KELKDAQKKLDCAKTKADASSKKMKEKQQEVEAI------TLELEELKRE 832
Query: 61 LGSMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLK 105
S V +KA + ++ E K V + +L+K
Sbjct: 833 HASNEQQLDAVNEAIKAYEGQIEKMAAEVAKNKESVNKAQDELMK 877
Score = 37 (18.1 bits), Expect = 4.0e-55, Sum P(2) = 4.0e-55
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGS 63
E +K + L + ++LER DK+ L++ E+ V ++ F KK L S
Sbjct: 269 ENEKKIKALNCEIEELERRKDKETGGKLKSLEDACAEAQRVNTKSQSA-FDLKKKNLAS 326
>UNIPROTKB|F1MY41 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0000796 "condensin complex"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000228
"nuclear chromosome" evidence=ISS] [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0046982 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:DAAA02024368 IPI:IPI01001793 Ensembl:ENSBTAT00000011562
NextBio:20877854 Uniprot:F1MY41
Length = 1191
Score = 565 (203.9 bits), Expect = 7.5e-58, Sum P(2) = 7.5e-58
Identities = 111/177 (62%), Positives = 131/177 (74%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D++K+L IE+LD+KK A+ AW KVN DFGSIFS LLPG+ A L+PP
Sbjct: 1000 DLMKKKRIVENDKSKILATIEDLDQKKNQAINIAWQKVNKDFGSIFSTLLPGANAMLAPP 1059
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G+ +LDGLE VA G WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1060 EGQTVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAPIYILDEVDAAL 1119
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRKN 264
DLSHTQNIG ML+ HF SQFI+VSLKEGMF+NANV+F+TKFVDG S V R +N
Sbjct: 1120 DLSHTQNIGHMLRTHFTHSQFIVVSLKEGMFNNANVLFKTKFVDGVSTVARFTQCQN 1176
Score = 68 (29.0 bits), Expect = 7.5e-58, Sum P(2) = 7.5e-58
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E + QKL+E ++KL R V+ +A L E ++
Sbjct: 961 NPKEAGERLQKLQEMKEKLGRNVNMRAMNVLTEAEERY 998
Score = 43 (20.2 bits), Expect = 3.2e-55, Sum P(2) = 3.2e-55
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGS 63
+E +K + L + ++LE+ DK+ LR+ E+ V ++ F KK L S
Sbjct: 268 YENDKKIKALSHEIEELEKRKDKEVGGILRSLEDALTEAQRVNTKSQSA-FDFKKKNLAS 326
Score = 42 (19.8 bits), Expect = 4.1e-55, Sum P(2) = 4.1e-55
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEE 36
+ K+Q+LK+ +D+L RT K+ +L EE
Sbjct: 674 ILMKFQELKDVQDEL-RT--KENELRALEEE 701
Score = 40 (19.1 bits), Expect = 6.7e-55, Sum P(2) = 6.7e-55
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 5 EVTRKYQKLKEQR 17
E+T QKLKE+R
Sbjct: 202 EITPTIQKLKEER 214
Score = 39 (18.8 bits), Expect = 8.5e-55, Sum P(2) = 8.5e-55
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
Y K +E+ D L++ +++ + +E Q K
Sbjct: 738 YHKQQEELDALKKIIEESEETLKNTKEIQKK 768
Score = 37 (18.1 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKV 41
EV+++ + + Q + ++ + AQ +N E+Q K+
Sbjct: 874 EVSKQKEVITAQDNIIKAKYAEIAQHKEQNNESQLKI 910
Score = 36 (17.7 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 1 MNPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAM 44
M E R+ ++LK+ + KL+ K S + +E Q +V A+
Sbjct: 780 MKNAEAERE-RELKDAQKKLDCAKTKADASSKKMKEKQQEVEAI 822
>UNIPROTKB|E1C610 [details] [associations]
symbol:E1C610 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0000796 "condensin
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00823281
Ensembl:ENSGALT00000037611 ArrayExpress:E1C610 Uniprot:E1C610
Length = 1173
Score = 555 (200.4 bits), Expect = 5.1e-57, Sum P(2) = 5.1e-57
Identities = 110/171 (64%), Positives = 129/171 (75%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D+ K+L IEELD KK AL AW KVN DFGSIFS+LLPG++A L P
Sbjct: 1000 DLMKKKRIVENDKIKILATIEELDRKKNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPS 1059
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
++ILDGLE V G +WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1060 KKQNILDGLEFRVGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAAL 1119
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
DLSHTQNIGQML HFK SQF++VSLK+GMF+NANV++RTKFVDG S V+R
Sbjct: 1120 DLSHTQNIGQMLHAHFKQSQFLVVSLKDGMFNNANVLYRTKFVDGISTVSR 1170
Score = 70 (29.7 bits), Expect = 5.1e-57, Sum P(2) = 5.1e-57
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVK 46
NP E +K QKL +++KLE++++ +A ++L +E + K ++K
Sbjct: 960 NPKETGQKLQKLLTKKEKLEKSLNMRA-MNLLSEAEERKYNDLMK 1003
Score = 41 (19.5 bits), Expect = 5.8e-54, Sum P(2) = 5.8e-54
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 9 KYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYL 61
K++ L ++E+ +DK A+ L QF V+ +K L I K Y+
Sbjct: 320 KWEILMTSVMEVEKIIDKNAEQHLHLIVGQFVQKDAVRDSIKGLTEIQ-KDYI 371
Score = 39 (18.8 bits), Expect = 9.3e-54, Sum P(2) = 9.3e-54
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA 47
Y K +E L++T+ + + + EE+Q K KA
Sbjct: 738 YHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKA 775
Score = 37 (18.1 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEE 36
VT KLK RD + K +QL +E
Sbjct: 671 VTPILSKLKTMRDAEDELKIKTSQLEATEKE 701
Score = 36 (17.7 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 2 NPHEVTRKYQKLKEQRD-KLERT--VDKKAQLSLRNEENQ 38
N + KYQ LK+Q + K E + K Q S +++ +
Sbjct: 704 NLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQE 743
>UNIPROTKB|E1C612 [details] [associations]
symbol:E1C612 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819262
Ensembl:ENSGALT00000037609 ArrayExpress:E1C612 Uniprot:E1C612
Length = 1173
Score = 555 (200.4 bits), Expect = 5.1e-57, Sum P(2) = 5.1e-57
Identities = 110/171 (64%), Positives = 129/171 (75%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D+ K+L IEELD KK AL AW KVN DFGSIFS+LLPG++A L P
Sbjct: 984 DLMKKKRIVENDKIKILATIEELDRKKNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPS 1043
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
++ILDGLE V G +WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1044 KKQNILDGLEFRVGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAAL 1103
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
DLSHTQNIGQML HFK SQF++VSLK+GMF+NANV++RTKFVDG S V+R
Sbjct: 1104 DLSHTQNIGQMLHAHFKQSQFLVVSLKDGMFNNANVLYRTKFVDGISTVSR 1154
Score = 70 (29.7 bits), Expect = 5.1e-57, Sum P(2) = 5.1e-57
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVK 46
NP E +K QKL +++KLE++++ +A ++L +E + K ++K
Sbjct: 944 NPKETGQKLQKLLTKKEKLEKSLNMRA-MNLLSEAEERKYNDLMK 987
Score = 39 (18.8 bits), Expect = 9.3e-54, Sum P(2) = 9.3e-54
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA 47
Y K +E L++T+ + + + EE+Q K KA
Sbjct: 719 YHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKA 756
Score = 37 (18.1 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEE 36
VT KLK RD + K +QL +E
Sbjct: 652 VTPILSKLKTMRDAEDELKIKTSQLEATEKE 682
Score = 37 (18.1 bits), Expect = 1.5e-53, Sum P(2) = 1.5e-53
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYL 61
N +V Q+++E K + ++ L+ E V + K P+ T L +S
Sbjct: 271 NEKKVKELAQQIEETEKKNNEVICVSDKMHLKWEILMTSVMEVEKEPMLTALKLSQSVMS 330
Query: 62 G 62
G
Sbjct: 331 G 331
Score = 36 (17.7 bits), Expect = 1.9e-53, Sum P(2) = 1.9e-53
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 2 NPHEVTRKYQKLKEQRD-KLERT--VDKKAQLSLRNEENQ 38
N + KYQ LK+Q + K E + K Q S +++ +
Sbjct: 685 NLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQE 724
>UNIPROTKB|E1C782 [details] [associations]
symbol:E1C782 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
IPI:IPI00579121 EMBL:AADN02057751 EMBL:AADN02057752
EMBL:AADN02057753 EMBL:AADN02057754 EMBL:AADN02057755
Ensembl:ENSGALT00000025306 ArrayExpress:E1C782 Uniprot:E1C782
Length = 1190
Score = 555 (200.4 bits), Expect = 5.5e-57, Sum P(2) = 5.5e-57
Identities = 110/171 (64%), Positives = 129/171 (75%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D+ K+L IEELD KK AL AW KVN DFGSIFS+LLPG++A L P
Sbjct: 1001 DLMKKKRIVENDKIKILATIEELDRKKNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPS 1060
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
++ILDGLE V G +WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1061 KKQNILDGLEFRVGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAAL 1120
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
DLSHTQNIGQML HFK SQF++VSLK+GMF+NANV++RTKFVDG S V+R
Sbjct: 1121 DLSHTQNIGQMLHAHFKQSQFLVVSLKDGMFNNANVLYRTKFVDGISTVSR 1171
Score = 70 (29.7 bits), Expect = 5.5e-57, Sum P(2) = 5.5e-57
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVK 46
NP E +K QKL +++KLE++++ +A ++L +E + K ++K
Sbjct: 961 NPKETGQKLQKLLTKKEKLEKSLNMRA-MNLLSEAEERKYNDLMK 1004
Score = 39 (18.8 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA 47
Y K +E L++T+ + + + EE+Q K KA
Sbjct: 738 YHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKA 775
Score = 37 (18.1 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEE 36
VT KLK RD + K +QL +E
Sbjct: 671 VTPILSKLKTMRDAEDELKIKTSQLEATEKE 701
Score = 36 (17.7 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 2 NPHEVTRKYQKLKEQRD-KLERT--VDKKAQLSLRNEENQ 38
N + KYQ LK+Q + K E + K Q S +++ +
Sbjct: 704 NLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQE 743
>UNIPROTKB|E1C611 [details] [associations]
symbol:E1C611 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00818627
Ensembl:ENSGALT00000037610 ArrayExpress:E1C611 Uniprot:E1C611
Length = 1192
Score = 555 (200.4 bits), Expect = 5.6e-57, Sum P(2) = 5.6e-57
Identities = 110/171 (64%), Positives = 129/171 (75%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D+ K+L IEELD KK AL AW KVN DFGSIFS+LLPG++A L P
Sbjct: 1003 DLMKKKRIVENDKIKILATIEELDRKKNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPS 1062
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
++ILDGLE V G +WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1063 KKQNILDGLEFRVGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAAL 1122
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
DLSHTQNIGQML HFK SQF++VSLK+GMF+NANV++RTKFVDG S V+R
Sbjct: 1123 DLSHTQNIGQMLHAHFKQSQFLVVSLKDGMFNNANVLYRTKFVDGISTVSR 1173
Score = 70 (29.7 bits), Expect = 5.6e-57, Sum P(2) = 5.6e-57
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVK 46
NP E +K QKL +++KLE++++ +A ++L +E + K ++K
Sbjct: 963 NPKETGQKLQKLLTKKEKLEKSLNMRA-MNLLSEAEERKYNDLMK 1006
Score = 39 (18.8 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA 47
Y K +E L++T+ + + + EE+Q K KA
Sbjct: 742 YHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKA 779
Score = 37 (18.1 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEE 36
VT KLK RD + K +QL +E
Sbjct: 675 VTPILSKLKTMRDAEDELKIKTSQLEATEKE 705
Score = 36 (17.7 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 2 NPHEVTRKYQKLKEQRD-KLERT--VDKKAQLSLRNEENQ 38
N + KYQ LK+Q + K E + K Q S +++ +
Sbjct: 708 NLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQE 747
>UNIPROTKB|E1C614 [details] [associations]
symbol:E1C614 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819568
Ensembl:ENSGALT00000037605 OMA:FESINES ArrayExpress:E1C614
Uniprot:E1C614
Length = 1149
Score = 555 (200.4 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 110/171 (64%), Positives = 129/171 (75%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK IVE+D+ K+L IEELD KK AL AW KVN DFGSIFS+LLPG++A L P
Sbjct: 960 DLMKKKRIVENDKIKILATIEELDRKKNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPS 1019
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
++ILDGLE V G +WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1020 KKQNILDGLEFRVGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAAL 1079
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
DLSHTQNIGQML HFK SQF++VSLK+GMF+NANV++RTKFVDG S V+R
Sbjct: 1080 DLSHTQNIGQMLHAHFKQSQFLVVSLKDGMFNNANVLYRTKFVDGISTVSR 1130
Score = 66 (28.3 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E +K QKL +++KLE++++ +A L E ++
Sbjct: 921 NPKETGQKLQKLLTKKEKLEKSLNMRAMNLLSEAEERY 958
Score = 39 (18.8 bits), Expect = 8.3e-54, Sum P(2) = 8.3e-54
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA 47
Y K +E L++T+ + + + EE+Q K KA
Sbjct: 703 YHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKA 740
Score = 37 (18.1 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEE 36
VT KLK RD + K +QL +E
Sbjct: 636 VTPILSKLKTMRDAEDELKIKTSQLEATEKE 666
Score = 36 (17.7 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 2 NPHEVTRKYQKLKEQRD-KLERT--VDKKAQLSLRNEENQ 38
N + KYQ LK+Q + K E + K Q S +++ +
Sbjct: 669 NLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQE 708
>UNIPROTKB|Q90988 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9031 "Gallus gallus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:X80792 IPI:IPI00579121 PIR:A54817
RefSeq:NP_990561.1 UniGene:Gga.4066 ProteinModelPortal:Q90988
PRIDE:Q90988 GeneID:396156 KEGG:gga:396156 CTD:10592
HOVERGEN:HBG106605 NextBio:20816212 Uniprot:Q90988
Length = 1189
Score = 552 (199.4 bits), Expect = 3.1e-56, Sum P(2) = 3.1e-56
Identities = 109/171 (63%), Positives = 129/171 (75%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ M KK +VE+D+ K+L IEELD KK AL AW KVN DFGSIFS+LLPG++A L P
Sbjct: 1000 DLMKKKRMVENDKIKILATIEELDRKKNKALHIAWEKVNKDFGSIFSMLLPGAKAMLVPS 1059
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
++ILDGLE V G +WKE+L ELSGGQR FKPAP+YILDEVDAAL
Sbjct: 1060 KKQNILDGLEFRVGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAAL 1119
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
DLSHTQNIGQML HFK SQF++VSLK+GMF+NANV++RTKFVDG S V+R
Sbjct: 1120 DLSHTQNIGQMLHAHFKQSQFLVVSLKDGMFNNANVLYRTKFVDGISTVSR 1170
Score = 66 (28.3 bits), Expect = 3.1e-56, Sum P(2) = 3.1e-56
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
NP E +K QKL +++KLE++++ +A L E ++
Sbjct: 961 NPKETGQKLQKLLTKKEKLEKSLNMRAMNLLSEAEERY 998
Score = 40 (19.1 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 19/106 (17%), Positives = 47/106 (44%)
Query: 9 KYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSSFS 68
K +K +EQ ++L+ +++ + ++ + + LK +I+ +K L + +
Sbjct: 895 KIEKYREQNNELQLSINALEHDINKYQQETADASSTLDKLLKEYKWIASEKELFGQADTT 954
Query: 69 VKVGAMVKAPLRTLLFISMEAMTKKSIVESD-RAKLLKVIEELDEK 113
A P T + + +TKK +E + + ++ E +E+
Sbjct: 955 YDFEA--NNPKETGQKLQ-KLLTKKEKLEKSLNMRAMNLLSEAEER 997
Score = 39 (18.8 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 10 YQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA 47
Y K +E L++T+ + + + EE+Q K KA
Sbjct: 738 YHKQQEDLLALKKTIAECEETLKKTEESQRKAEEEYKA 775
Score = 37 (18.1 bits), Expect = 3.4e-53, Sum P(2) = 3.4e-53
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEE 36
VT KLK RD + K +QL +E
Sbjct: 671 VTPILSKLKTMRDAEDELKIKTSQLEATEKE 701
Score = 36 (17.7 bits), Expect = 4.4e-53, Sum P(2) = 4.4e-53
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 2 NPHEVTRKYQKLKEQRD-KLERT--VDKKAQLSLRNEENQ 38
N + KYQ LK+Q + K E + K Q S +++ +
Sbjct: 704 NLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQE 743
>FB|FBgn0027783 [details] [associations]
symbol:SMC2 "SMC2" species:7227 "Drosophila melanogaster"
[GO:0007062 "sister chromatid cohesion" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0000796 "condensin complex" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 EMBL:AE013599 GO:GO:0005524
GO:GO:0005634 GO:GO:0005875 GO:GO:0007052 GO:GO:0022008
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
KO:K06674 PANTHER:PTHR18937:SF9 OMA:CQNGKIP CTD:10592 HSSP:Q9X0R4
EMBL:AF179287 RefSeq:NP_610995.1 UniGene:Dm.2168 SMR:Q7KK96
STRING:Q7KK96 EnsemblMetazoa:FBtr0087461 GeneID:36653
KEGG:dme:Dmel_CG10212 UCSC:CG10212-RA FlyBase:FBgn0027783
InParanoid:Q7KK96 OrthoDB:EOG4P5HR3 GenomeRNAi:36653 NextBio:799708
Uniprot:Q7KK96
Length = 1179
Score = 494 (179.0 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 96/176 (54%), Positives = 128/176 (72%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
E +++IV D+ K+ K+I ++DE+++ L +A +VNT+F IFS LLPG++AKL+P
Sbjct: 998 ETERRRNIVAMDKEKIKKIIVKMDEEEQDQLNKAATEVNTNFSGIFSSLLPGAEAKLNPV 1057
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
L GLE+ V F G+WKESLGELSGGQ+ F PAPLYILDEVDAAL
Sbjct: 1058 HTNGCLTGLEIKVGFNGIWKESLGELSGGQKSLVALSLVLAMLKFSPAPLYILDEVDAAL 1117
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRK 263
D+SHTQNIG MLK+HF SQF+IVSLK+G+F++ANV+FRT F +G S +TR V+R+
Sbjct: 1118 DMSHTQNIGSMLKQHFTNSQFLIVSLKDGLFNHANVLFRTLFEEGVSTITRQVSRQ 1173
Score = 91 (37.1 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
+PHE K K++E++DK+ERT++ A + L EE FK
Sbjct: 959 DPHEAGNKLAKMQEKKDKMERTLNMNAIMVLDREEENFK 997
Score = 60 (26.2 bits), Expect = 2.2e-49, Sum P(2) = 2.2e-49
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLK 50
EVT Q +KEQ+DKL R +K+ + L +E K ++ +K
Sbjct: 865 EVTELEQAIKEQKDKL-RDQNKEMRNQLVKKEKMLKENQEIELEVK 909
>ASPGD|ASPL0000004872 [details] [associations]
symbol:smcB species:162425 "Emericella nidulans"
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000796 "condensin
complex" evidence=IEA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
EMBL:BN001301 GO:GO:0006310 GO:GO:0030261 EMBL:AACD01000101
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HOGENOM:HOG000163792 OMA:CQNGKIP
OrthoDB:EOG4P2T9B RefSeq:XP_663503.1 ProteinModelPortal:Q5B0N1
STRING:Q5B0N1 EnsemblFungi:CADANIAT00007134 GeneID:2870708
KEGG:ani:AN5899.2 Uniprot:Q5B0N1
Length = 1179
Score = 502 (181.8 bits), Expect = 7.0e-47, P = 7.0e-47
Identities = 104/171 (60%), Positives = 122/171 (71%)
Query: 88 EAMTKKSI--VESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLS 145
EA K + V D++K+ + I L+E KK AL + W KVN DFG IFS LLPGS AKL
Sbjct: 1000 EAALKNMMRTVIRDKSKIEETIINLNEYKKEALHKTWTKVNADFGQIFSELLPGSFAKLD 1059
Query: 146 PPAGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDA 205
PP GKDI DGLEV V+ G +WK+SL ELSGGQR FKPAP+YILDEVDA
Sbjct: 1060 PPEGKDITDGLEVKVSLGKVWKQSLTELSGGQRSLIALSLIMALLQFKPAPMYILDEVDA 1119
Query: 206 ALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
ALDLSHTQNIG+++K FK SQFI+VSLK+GMF NAN IFRT+F +G S V
Sbjct: 1120 ALDLSHTQNIGRLIKTRFKGSQFIVVSLKDGMFQNANRIFRTRFSEGTSVV 1170
>SGD|S000001927 [details] [associations]
symbol:SMC2 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003680 "AT DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0000799 "nuclear condensin complex"
evidence=ISS;TAS;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;IMP;TAS]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0000217 "DNA secondary
structure binding" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 SGD:S000001927 Pfam:PF02463 GO:GO:0005739
GO:GO:0005524 GO:GO:0051301 GO:GO:0006281 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0007076
GO:GO:0003680 GO:GO:0000799 GO:GO:0070058 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:U05820
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
GO:GO:0000217 HOGENOM:HOG000163792 OrthoDB:EOG4P2T9B PIR:A56157
RefSeq:NP_116687.1 ProteinModelPortal:P38989 SMR:P38989
DIP:DIP-2983N IntAct:P38989 MINT:MINT-435495 STRING:P38989
PaxDb:P38989 EnsemblFungi:YFR031C GeneID:850589 KEGG:sce:YFR031C
CYGD:YFR031c OMA:SECESAE NextBio:966434 Genevestigator:P38989
GermOnline:YFR031C Uniprot:P38989
Length = 1170
Score = 474 (171.9 bits), Expect = 5.5e-46, Sum P(2) = 5.5e-46
Identities = 98/172 (56%), Positives = 119/172 (69%)
Query: 88 EAMTKKSI--VESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLS 145
EA K I +E D+ K+ + I +L+E K+ L + W KV DFG+IF+ LLP S AKL
Sbjct: 997 EAALKTMIKTIEKDKMKIQETISKLNEYKRETLVKTWEKVTLDFGNIFADLLPNSFAKLV 1056
Query: 146 PPAGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDA 205
P GKD+ GLEV V G +WKESL ELSGGQR F+PAP+YILDEVDA
Sbjct: 1057 PCEGKDVTQGLEVKVKLGNIWKESLIELSGGQRSLIALSLIMALLQFRPAPMYILDEVDA 1116
Query: 206 ALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVT 257
ALDLSHTQNIG ++K FK SQFI+VSLKEGMF+NAN +FRT+F DG S V+
Sbjct: 1117 ALDLSHTQNIGHLIKTRFKGSQFIVVSLKEGMFANANRVFRTRFQDGTSVVS 1168
Score = 48 (22.0 bits), Expect = 5.5e-46, Sum P(2) = 5.5e-46
Identities = 22/102 (21%), Positives = 51/102 (50%)
Query: 11 QKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSSFSVK 70
++L+EQ + ER D L L E+ ++ + KTLL +L S+ S ++
Sbjct: 805 KELEEQESESERKYDLFQNLELETEQLSSELDSN-----KTLLH----NHLKSIESLKLE 855
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDE 112
+ ++ +R + + +T ++ + ++ +L+ + +EL+E
Sbjct: 856 -NSDLEGKIRG---VEDDLVTVQTELNEEKKRLMDIDDELNE 893
Score = 42 (19.8 bits), Expect = 2.3e-45, Sum P(2) = 2.3e-45
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 14 KEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTL 52
+++R+K ERT+ KK + L +EN+ + ++ L+ L
Sbjct: 175 EDRREKAERTMSKK-ETKL--QENRTLLTEEIEPKLEKL 210
>POMBASE|SPBP4H10.06c [details] [associations]
symbol:cut14 "condensin complex subunit Cut14"
species:4896 "Schizosaccharomyces pombe" [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=ISM] [GO:0051304 "chromosome
separation" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBP4H10.06c Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0051301 EMBL:CU329671
GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HOGENOM:HOG000163792 EMBL:D30787 PIR:S51623 RefSeq:NP_596180.1
ProteinModelPortal:P41003 IntAct:P41003 STRING:P41003
EnsemblFungi:SPBP4H10.06c.1 GeneID:2541319 KEGG:spo:SPBP4H10.06c
OMA:GTALEIC OrthoDB:EOG4P2T9B NextBio:20802429 GO:GO:0034500
Uniprot:P41003
Length = 1172
Score = 473 (171.6 bits), Expect = 8.8e-44, P = 8.8e-44
Identities = 109/271 (40%), Positives = 163/271 (60%)
Query: 1 MNPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRN---EENQFKVGAMVKAPLKTLLFI-- 55
+N E+T QKL + D+LER +K ++ N +EN + G + +F
Sbjct: 904 INNGELT--IQKLNHEFDRLER--EKSVAITAINHLEKENDWIDGQKQHFGKQGTIFDFH 959
Query: 56 --SMKKYLGSMSSFSVKVGAMVKAPLRTLLFISMEAMTKK-----SIVES---DRAKLLK 105
+M++ + + + +M KA + + ++ + KK S++++ D+ K+
Sbjct: 960 SQNMRQCREQLHNLKPRFASMRKA-INPKVMDMIDGVEKKEAKLRSMIKTIHRDKKKIQD 1018
Query: 106 VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFGGL 165
++ +D K+ AL + W +VN+ FG IF LLPG+ A+L PP K+ DGLE++V G +
Sbjct: 1019 TVKSIDRFKRSALEKTWREVNSSFGEIFDELLPGNSAELQPPENKEFTDGLEIHVKIGSI 1078
Query: 166 WKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKT 225
WK+SL ELSGGQR +KPAP+YILDE+DAALDLSHTQNIG+++K FK
Sbjct: 1079 WKDSLAELSGGQRSLVALALIMSLLKYKPAPMYILDEIDAALDLSHTQNIGRLIKTKFKG 1138
Query: 226 SQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
SQFIIVSLKEGMF+NAN +F +F+DG+S V
Sbjct: 1139 SQFIIVSLKEGMFTNANRLFHVRFMDGSSVV 1169
>CGD|CAL0000340 [details] [associations]
symbol:SMC2 species:5476 "Candida albicans" [GO:0003680 "AT
DNA binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0000939 "condensed chromosome inner kinetochore" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000799 "nuclear condensin complex" evidence=IEA]
[GO:0070058 "tRNA gene clustering" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0000340
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:AACQ01000103 EMBL:AACQ01000102
KO:K06674 PANTHER:PTHR18937:SF9 RefSeq:XP_714465.1
RefSeq:XP_714514.1 ProteinModelPortal:Q59Y26 STRING:Q59Y26
GeneID:3643867 GeneID:3643918 KEGG:cal:CaO19.11106
KEGG:cal:CaO19.3623 Uniprot:Q59Y26
Length = 1171
Score = 454 (164.9 bits), Expect = 3.3e-43, Sum P(2) = 3.3e-43
Identities = 95/172 (55%), Positives = 118/172 (68%)
Query: 86 SMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLS 145
S++ M K +E D+ K++ I +L+ K+ L + KV+ DFG+IF+ LLPGS AKL
Sbjct: 1000 SLKTMVKT--IEKDKNKIVNTINKLNGYKRDTLNTTYQKVSKDFGAIFADLLPGSFAKLV 1057
Query: 146 PPAGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDA 205
P D+ GLEV V G +WKESL ELSGGQR FKPAP+YILDEVDA
Sbjct: 1058 PIDMMDVTKGLEVKVKLGQVWKESLVELSGGQRSLIALSLIMALLQFKPAPMYILDEVDA 1117
Query: 206 ALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVT 257
ALDLSHTQNIG ++K FK SQFI+VSLKEGMF+NAN +FRT+F DG S V+
Sbjct: 1118 ALDLSHTQNIGHLIKTRFKGSQFIVVSLKEGMFTNANRVFRTRFQDGTSIVS 1169
Score = 42 (19.8 bits), Expect = 3.3e-43, Sum P(2) = 3.3e-43
Identities = 10/23 (43%), Positives = 19/23 (82%)
Query: 14 KEQRDKLERTVDKK-AQLS-LRN 34
+E++DK ++T+ KK A+L+ +RN
Sbjct: 175 EERKDKAQKTMAKKEAKLTEIRN 197
Score = 39 (18.8 bits), Expect = 6.8e-43, Sum P(2) = 6.8e-43
Identities = 9/34 (26%), Positives = 22/34 (64%)
Query: 5 EVTRKYQKLKEQRDKLERT-VD-KKAQLSLRNEE 36
+V K ++L+ Q DK + +D ++ ++ L+N++
Sbjct: 807 QVISKEKQLENQTDKFQAAQIDSEQLKIELQNKQ 840
>WB|WBGene00003367 [details] [associations]
symbol:mix-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0042464 "dosage
compensation by hypoactivation of X chromosome" evidence=IMP]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000775
"chromosome, centromeric region" evidence=IDA] [GO:0046536 "dosage
compensation complex" evidence=IPI] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0000775
GO:GO:0051301 GO:GO:0002119 GO:GO:0040039 GO:GO:0000793
GO:GO:0007076 EMBL:Z46935 GO:GO:0042464 eggNOG:COG1196
GO:GO:0046536 SUPFAM:SSF75553 EMBL:U96387 PIR:T23744 PIR:T23981
RefSeq:NP_496331.1 UniGene:Cel.8608 ProteinModelPortal:Q09591
SMR:Q09591 IntAct:Q09591 STRING:Q09591 PaxDb:Q09591
EnsemblMetazoa:M106.1 GeneID:174669 KEGG:cel:CELE_M106.1
UCSC:M106.1 CTD:174669 WormBase:M106.1 GeneTree:ENSGT00550000074857
HOGENOM:HOG000016791 InParanoid:Q09591 KO:K06674 OMA:KSYQKHT
NextBio:884988 PANTHER:PTHR18937:SF9 Uniprot:Q09591
Length = 1244
Score = 464 (168.4 bits), Expect = 9.2e-43, P = 9.2e-43
Identities = 96/172 (55%), Positives = 116/172 (67%)
Query: 87 MEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSP 146
++ K+ + D L K I LD+KK L A VN DFG IF+ LLP + A L P
Sbjct: 1014 LDIKNKRERITEDFNMLKKTIATLDKKKVDELIRAHESVNKDFGQIFNCLLPDAHASLVP 1073
Query: 147 PAGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAA 206
P GK + +GLEV V+FGG+ K+SL ELSGGQR FKPAPLYILDEVDAA
Sbjct: 1074 PEGKTVCEGLEVKVSFGGVVKDSLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAA 1133
Query: 207 LDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
LDLSHT NIG M+K HF +QFIIVSLK+GMFSNA+V+F+T+F DG+S TR
Sbjct: 1134 LDLSHTANIGMMIKTHFHHNQFIIVSLKQGMFSNADVLFQTRFADGHSTCTR 1185
>UNIPROTKB|Q09591 [details] [associations]
symbol:mix-1 "Mitotic chromosome and
X-chromosome-associated protein mix-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0009792
GO:GO:0000775 GO:GO:0051301 GO:GO:0002119 GO:GO:0040039
GO:GO:0000793 GO:GO:0007076 EMBL:Z46935 GO:GO:0042464
eggNOG:COG1196 GO:GO:0046536 SUPFAM:SSF75553 EMBL:U96387 PIR:T23744
PIR:T23981 RefSeq:NP_496331.1 UniGene:Cel.8608
ProteinModelPortal:Q09591 SMR:Q09591 IntAct:Q09591 STRING:Q09591
PaxDb:Q09591 EnsemblMetazoa:M106.1 GeneID:174669
KEGG:cel:CELE_M106.1 UCSC:M106.1 CTD:174669 WormBase:M106.1
GeneTree:ENSGT00550000074857 HOGENOM:HOG000016791 InParanoid:Q09591
KO:K06674 OMA:KSYQKHT NextBio:884988 PANTHER:PTHR18937:SF9
Uniprot:Q09591
Length = 1244
Score = 464 (168.4 bits), Expect = 9.2e-43, P = 9.2e-43
Identities = 96/172 (55%), Positives = 116/172 (67%)
Query: 87 MEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSP 146
++ K+ + D L K I LD+KK L A VN DFG IF+ LLP + A L P
Sbjct: 1014 LDIKNKRERITEDFNMLKKTIATLDKKKVDELIRAHESVNKDFGQIFNCLLPDAHASLVP 1073
Query: 147 PAGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAA 206
P GK + +GLEV V+FGG+ K+SL ELSGGQR FKPAPLYILDEVDAA
Sbjct: 1074 PEGKTVCEGLEVKVSFGGVVKDSLHELSGGQRSLVALSLILAMLKFKPAPLYILDEVDAA 1133
Query: 207 LDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
LDLSHT NIG M+K HF +QFIIVSLK+GMFSNA+V+F+T+F DG+S TR
Sbjct: 1134 LDLSHTANIGMMIKTHFHHNQFIIVSLKQGMFSNADVLFQTRFADGHSTCTR 1185
>GENEDB_PFALCIPARUM|MAL13P1.96 [details] [associations]
symbol:MAL13P1.96 "chromosome segregation
protein, putative" species:5833 "Plasmodium falciparum" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISS]
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0046982 GO:GO:0007076 EMBL:AL844509
GO:GO:0000796 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HSSP:P32908 HOGENOM:HOG000163792 OMA:CQNGKIP
RefSeq:XP_001349920.1 ProteinModelPortal:Q8IED2 IntAct:Q8IED2
MINT:MINT-1645015 PRIDE:Q8IED2 EnsemblProtists:MAL13P1.96:mRNA
GeneID:813987 KEGG:pfa:MAL13P1.96 EuPathDB:PlasmoDB:PF3D7_1318400
ProtClustDB:CLSZ2432256 Uniprot:Q8IED2
Length = 1218
Score = 423 (154.0 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 88/171 (51%), Positives = 117/171 (68%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ +TKKS VE D+ K+ +VI +LD KK +L + ++N F +IFS LL +QAKLS
Sbjct: 1017 DLVTKKSQVEEDKKKIQEVIADLDVKKSESLLAMYQQINEYFQAIFSTLLNNAQAKLSIV 1076
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G D+ +G+E+ +AF WKESL ELSGGQR + P+YILDE+DAAL
Sbjct: 1077 DG-DLANGIEMKIAFNNNWKESLTELSGGQRSLLALSLILALLKVRTVPMYILDEIDAAL 1135
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
DL+HTQNIG M++ F SQFIIVSLKEGMFS+A+V+F+ +F+DG S V R
Sbjct: 1136 DLNHTQNIGDMIRTQFPHSQFIIVSLKEGMFSHADVLFKMRFIDGISTVNR 1186
Score = 39 (18.8 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 2 NPHEVTRKYQKLKEQRDKLER 22
N H + ++ LKEQR K E+
Sbjct: 425 NKH-LEKEIMTLKEQRKKYEK 444
Score = 39 (18.8 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLS 31
H+ K +++ E+ LE+ +KK +S
Sbjct: 706 HDNENKLKEVSEKLKSLEKAEEKKKIIS 733
Score = 37 (18.1 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTL 52
E+ ++ +KL E KLE+ + + + EE+ + +K +K L
Sbjct: 778 ELYKEQKKLTEVIRKLEKDISEYEANKDKKEEDLKETIKKLKNKIKQL 825
>UNIPROTKB|Q8IED2 [details] [associations]
symbol:MAL13P1.96 "Structural maintenance of chromosomes
protein 2" species:36329 "Plasmodium falciparum 3D7" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISS] [GO:0000796
"condensin complex" evidence=ISS] [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0051301 GO:GO:0046982
GO:GO:0007076 EMBL:AL844509 GO:GO:0000796 eggNOG:COG1196
SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9 HSSP:P32908
HOGENOM:HOG000163792 OMA:CQNGKIP RefSeq:XP_001349920.1
ProteinModelPortal:Q8IED2 IntAct:Q8IED2 MINT:MINT-1645015
PRIDE:Q8IED2 EnsemblProtists:MAL13P1.96:mRNA GeneID:813987
KEGG:pfa:MAL13P1.96 EuPathDB:PlasmoDB:PF3D7_1318400
ProtClustDB:CLSZ2432256 Uniprot:Q8IED2
Length = 1218
Score = 423 (154.0 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 88/171 (51%), Positives = 117/171 (68%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
+ +TKKS VE D+ K+ +VI +LD KK +L + ++N F +IFS LL +QAKLS
Sbjct: 1017 DLVTKKSQVEEDKKKIQEVIADLDVKKSESLLAMYQQINEYFQAIFSTLLNNAQAKLSIV 1076
Query: 148 AGKDILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAAL 207
G D+ +G+E+ +AF WKESL ELSGGQR + P+YILDE+DAAL
Sbjct: 1077 DG-DLANGIEMKIAFNNNWKESLTELSGGQRSLLALSLILALLKVRTVPMYILDEIDAAL 1135
Query: 208 DLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
DL+HTQNIG M++ F SQFIIVSLKEGMFS+A+V+F+ +F+DG S V R
Sbjct: 1136 DLNHTQNIGDMIRTQFPHSQFIIVSLKEGMFSHADVLFKMRFIDGISTVNR 1186
Score = 39 (18.8 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 2 NPHEVTRKYQKLKEQRDKLER 22
N H + ++ LKEQR K E+
Sbjct: 425 NKH-LEKEIMTLKEQRKKYEK 444
Score = 39 (18.8 bits), Expect = 1.6e-39, Sum P(2) = 1.6e-39
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLS 31
H+ K +++ E+ LE+ +KK +S
Sbjct: 706 HDNENKLKEVSEKLKSLEKAEEKKKIIS 733
Score = 37 (18.1 bits), Expect = 2.6e-39, Sum P(2) = 2.6e-39
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTL 52
E+ ++ +KL E KLE+ + + + EE+ + +K +K L
Sbjct: 778 ELYKEQKKLTEVIRKLEKDISEYEANKDKKEEDLKETIKKLKNKIKQL 825
>TIGR_CMR|CHY_1443 [details] [associations]
symbol:CHY_1443 "chromosome segregation protein SMC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=ISS] [GO:0030261 "chromosome condensation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392
KO:K03529 TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_360275.1
ProteinModelPortal:Q3AC59 STRING:Q3AC59 GeneID:3728135
KEGG:chy:CHY_1443 PATRIC:21276017
BioCyc:CHYD246194:GJCN-1442-MONOMER Uniprot:Q3AC59
Length = 1185
Score = 192 (72.6 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 45/157 (28%), Positives = 77/157 (49%)
Query: 100 RAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDGLEVN 159
+ +L K++ +L E+ + E +N ++ +F L G +A L G+D +G+E+
Sbjct: 1018 KEQLEKLLSQLTEEMEQRFNEFLKLLNEEYDLVFKELFGGGRAALEKVVGEDQKEGIEII 1077
Query: 160 VAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQML 219
V G ++ LG LSGG+R KP+P +LDE+DAALD ++ Q L
Sbjct: 1078 VELPGKKRQPLGLLSGGERALASIALLFALFNLKPSPFCVLDEIDAALDEANVQRFAAYL 1137
Query: 220 KRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
K+ + +Q I+++ + G + DG S V
Sbjct: 1138 KKIGERNQVILITHRRGSMEVCAKLIGISMQDGCSKV 1174
Score = 58 (25.5 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 26/117 (22%), Positives = 51/117 (43%)
Query: 5 EVTRKYQKLKEQRDKLE-RTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGS 63
E K Q +K++R+ +E R ++ K QL N E + + + IS+KK L
Sbjct: 735 EADLKEQNIKDKRNLIESRLIELKGQLDKNNREKKNLLVEKENREQQINNIISLKKKLEE 794
Query: 64 MSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALRE 120
+F K + + L++ + + ++ + K L+ I L +K + +E
Sbjct: 795 KIAFLEKEISRIN----DLIYENQNYYQELTLQQVQLEKALENIFNLINEKSLQKKE 847
Score = 54 (24.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 21/93 (22%), Positives = 45/93 (48%)
Query: 11 QKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSSFSVK 70
+KL E + LE D++ +L+ R + ++ + L L S+K + + +
Sbjct: 371 EKLLELKKSLENCKDEQFELNFREVSLRNEIN-FISDSLTRLTNDSLK-IEKDIYELNRE 428
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKL 103
+G ++ LR+L E + K+ ++++ R KL
Sbjct: 429 IGE-IENTLRSLNDFKKENLRKREVLKNKRKKL 460
Score = 48 (22.0 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 28/119 (23%), Positives = 63/119 (52%)
Query: 11 QKLKEQRDKLE----RTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSS 66
+K ++Q ++LE + + ++ +L L ++ Q K+ +++ L+ L ++KKY +
Sbjct: 255 EKNQDQVNRLEASFAKILSEEGKLGLFSDNLQ-KIVLNLESCLEKL--DNVKKYQQEEEN 311
Query: 67 ---FSVK-VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELD-EKKKIALRE 120
+K + +KA R L+ I+ E + + V+ +AK ++I L +K+K+ + E
Sbjct: 312 RLWLELKSLKEQIKANGRKLVEINQELNSYQRQVKDLKAKEREIIGNLKVQKQKLGINE 370
Score = 47 (21.6 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQ--LSLRNEE 36
E RK + LK +R KLE ++ A+ L L+NE+
Sbjct: 445 ENLRKREVLKNKRKKLEEELNLLAKNILILQNEK 478
Score = 44 (20.5 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 24/112 (21%), Positives = 53/112 (47%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTL-------LFI-SMKKYLGS 63
K+K DK+ +K L E+NQ +V + + K L LF +++K + +
Sbjct: 232 KIKNLLDKVRENEEKITLLHNLIEKNQDQVNRLEASFAKILSEEGKLGLFSDNLQKIVLN 291
Query: 64 MSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
+ S K+ + K + +E + K ++++ KL+++ +EL+ ++
Sbjct: 292 LESCLEKLDNVKKYQQEEENRLWLELKSLKEQIKANGRKLVEINQELNSYQR 343
Score = 40 (19.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 7/25 (28%), Positives = 17/25 (68%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQL 30
V K+++LK++ +++ T+ K +L
Sbjct: 897 VKNKHEELKDKLSEMQTTLTKTQKL 921
>UNIPROTKB|P51834 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:D64116 EMBL:D49781 PIR:G69708 RefSeq:NP_389476.2
ProteinModelPortal:P51834 SMR:P51834 IntAct:P51834
EnsemblBacteria:EBBACT00000001044 GeneID:938085 KEGG:bsu:BSU15940
PATRIC:18974993 GenoList:BSU15940 HOGENOM:HOG000036392 KO:K03529
ProtClustDB:CLSK2765274 BioCyc:BSUB:BSU15940-MONOMER
TIGRFAMs:TIGR02168 Uniprot:P51834
Length = 1186
Score = 214 (80.4 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 68/260 (26%), Positives = 126/260 (48%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSM 64
E+ Q L+E+ +K QL EE + +V ++K ++ L ++ LGS+
Sbjct: 937 ELDNLLQYLREEYSLSFEGAKEKYQLETDPEEARKRV-KLIKLAIEELGTVN----LGSI 991
Query: 65 SSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLK 124
F +V K F+S + K+ + E+ L +VIEE+DE+ + +++
Sbjct: 992 DEFE-RVNERYK-------FLSEQ---KEDLTEAKNT-LFQVIEEMDEEMTKRFNDTFVQ 1039
Query: 125 VNTDFGSIFSLLLPGSQAKLSPPAGKDIL-DGLEVNVAFGGLWKESLGELSGGQRXXXXX 183
+ + F +F L G +A+L D+L G+E+ G ++L LSGG+R
Sbjct: 1040 IRSHFDQVFRSLFGGGRAELRLTDPNDLLHSGVEIIAQPPGKKLQNLNLLSGGERALTAI 1099
Query: 184 XXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANV 243
+P P +LDEV+AALD ++ Q LK++ +QFI+++ ++G A+V
Sbjct: 1100 ALLFSILKVRPVPFCVLDEVEAALDEANVFRFAQYLKKYSSDTQFIVITHRKGTMEEADV 1159
Query: 244 IFRTKFVDGNSNVTRTVNRK 263
++ + S V++ ++ K
Sbjct: 1160 LYGVTMQE--SGVSKVISVK 1177
>TIGR_CMR|BA_3986 [details] [associations]
symbol:BA_3986 "chromosome segregation SMC protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
OMA:CQNGKIP HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 RefSeq:NP_846228.1 RefSeq:YP_020625.1
RefSeq:YP_029950.1 ProteinModelPortal:Q81WI9 IntAct:Q81WI9
DNASU:1086762 EnsemblBacteria:EBBACT00000012710
EnsemblBacteria:EBBACT00000015269 EnsemblBacteria:EBBACT00000024406
GeneID:1086762 GeneID:2817444 GeneID:2848221 KEGG:ban:BA_3986
KEGG:bar:GBAA_3986 KEGG:bat:BAS3699 ProtClustDB:CLSK873325
BioCyc:BANT260799:GJAJ-3757-MONOMER
BioCyc:BANT261594:GJ7F-3874-MONOMER Uniprot:Q81WI9
Length = 1189
Score = 195 (73.7 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 48/173 (27%), Positives = 90/173 (52%)
Query: 90 MTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAG 149
+ +K +E + L ++I E+DE+ K + + +F S+FS L G +A L
Sbjct: 1006 LEQKDDLEEAKTTLHQLITEMDEEMKKRFSTTFEGIRMEFQSVFSELFGGGRADLVMTNP 1065
Query: 150 KDILD-GLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALD 208
+D+L+ G+++ G ++LG LSGG+R +P P +LDEV+AALD
Sbjct: 1066 EDLLNTGIDIVAQPPGKKLQNLGLLSGGERALTAIALLFGILKVRPVPFCVLDEVEAALD 1125
Query: 209 LSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVN 261
++ Q LK+ +QFI+++ ++G ++V++ + S V++ V+
Sbjct: 1126 EANVARFAQYLKKFSDETQFIVITHRKGTMEESDVLYGVTMQE--SGVSKLVS 1176
Score = 45 (20.9 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 9 KYQKLKEQRDKLERTVDKKAQ 29
K Q+L Q++K+ER +K +
Sbjct: 823 KQQRLSNQKEKVERLTKEKEE 843
Score = 36 (17.7 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 6/35 (17%), Positives = 20/35 (57%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQ 38
HE+ ++K + R++ +++A++S ++ +
Sbjct: 232 HEIEELHEKWEALRNQFGHNKNEEAKMSTHLQKGE 266
>UNIPROTKB|Q9X0R4 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:243274 "Thermotoga maritima MSB8" [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
EMBL:AE000512 GenomeReviews:AE000512_GR GO:GO:0007062
SUPFAM:SSF75553 KO:K03529 TIGRFAMs:TIGR02168 EMBL:AGIJ01000001
PIR:A72287 RefSeq:NP_228987.1 PDB:1E69 PDB:1GXJ PDB:1GXK PDB:1GXL
PDBsum:1E69 PDBsum:1GXJ PDBsum:1GXK PDBsum:1GXL SMR:Q9X0R4
GeneID:898303 KEGG:tma:TM1182 PATRIC:23937304 OMA:NNEVHAL
ProtClustDB:CLSK875623 EvolutionaryTrace:Q9X0R4 Uniprot:Q9X0R4
Length = 1170
Score = 211 (79.3 bits), Expect = 8.5e-16, P = 8.5e-16
Identities = 50/171 (29%), Positives = 91/171 (53%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
E + +K +E + KL ++IE+ D + + L + + +VN F SLL G + +L+
Sbjct: 989 EILKQKEDLEEAKRKLEEIIEKTDREAESLLFDVYQRVNESFNRFISLLFFGGEGRLNIV 1048
Query: 148 A-GKDILD-GLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDA 205
+ K ILD G E+++ G + L LSGG++ KP+P Y+LDEVD+
Sbjct: 1049 SEAKSILDAGFEISIRKPGRRDQKLSLLSGGEKALVGLALLFALMEIKPSPFYVLDEVDS 1108
Query: 206 ALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
LD + + ++LK + K +QFI+++ + + A+++ V+G S +
Sbjct: 1109 PLDDYNAERFKRLLKENSKHTQFIVITHNKIVMEAADLLHGVTMVNGVSAI 1159
>UNIPROTKB|Q71YL3 [details] [associations]
symbol:smC "Chromosome partition protein Smc"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529
TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_014424.1
ProteinModelPortal:Q71YL3 STRING:Q71YL3 GeneID:2797604
KEGG:lmf:LMOf2365_1831 PATRIC:20324957 ProtClustDB:CLSK2518461
Uniprot:Q71YL3
Length = 1186
Score = 190 (71.9 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 47/160 (29%), Positives = 85/160 (53%)
Query: 103 LLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILD-GLEVNVA 161
L KV++E+DE+ KI E++ + T+F +F L G A+L +++L G+++ V
Sbjct: 1018 LFKVMDEMDEEMKIRFSESFEAIKTEFAIVFPELFGGGSAELVLLDPENLLTTGIDIVVQ 1077
Query: 162 FGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKR 221
G ++L SGG+R +P P ILDEV+AALD ++ + LK+
Sbjct: 1078 PPGKKLQNLSLRSGGERALTAIALLFAIIRVRPVPFCILDEVEAALDEANVTRFSRYLKQ 1137
Query: 222 HFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVN 261
+QFI+++ ++G A+V++ + S V++ V+
Sbjct: 1138 FESGTQFIVITHRKGTMEEADVLYGVTMQE--SGVSKLVS 1175
Score = 38 (18.4 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 25/120 (20%), Positives = 53/120 (44%)
Query: 9 KYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSSFS 68
KY+ K+Q + + + + L+ R ++ +++ ++ PL+ I+ K YL
Sbjct: 169 KYKHRKKQAEN--KLFETEENLN-RVQDILYELEGQLE-PLEMQASIA-KDYLFQQEELE 223
Query: 69 VKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTD 128
++ + + +L A +K E+ L+K+ EEL ++ + RE TD
Sbjct: 224 KYEVTLLASEISSLT--EKLAEVRKEFGENQTV-LIKLREELHAEEAVISREKHALNETD 280
>POMBASE|SPBC146.03c [details] [associations]
symbol:cut3 "condensin complex subunit Cut3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IMP] [GO:0034613
"cellular protein localization" evidence=IMP] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBC146.03c Pfam:PF02463 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0034613 GO:GO:0051301
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 EMBL:D30788
EMBL:AB027959 PIR:S51622 RefSeq:NP_595392.1
ProteinModelPortal:P41004 DIP:DIP-35048N IntAct:P41004
STRING:P41004 EnsemblFungi:SPBC146.03c.1 GeneID:2539817
KEGG:spo:SPBC146.03c OrthoDB:EOG4WM82V NextBio:20800966
Uniprot:P41004
Length = 1324
Score = 177 (67.4 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 50/186 (26%), Positives = 88/186 (47%)
Query: 88 EAMTKKSIVESD---RAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKL 144
EA + S +S+ R L KV+ +L ++ + ++ ++ ++ G A+L
Sbjct: 1141 EAEKRDSDYQSELQKRTDLKKVVTDLQSQRLDEFMYGFGIISMKLKEMYQIITMGGNAEL 1200
Query: 145 SPPAGKDILDGLEVNVAFGGL-----WKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYI 199
D LD V F + WK ++ LSGG++ +KP PLY+
Sbjct: 1201 ELV---DSLDPFSEGVLFSVMPPKKSWK-NISNLSGGEKTLSSLALVFALHNYKPTPLYV 1256
Query: 200 LDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR- 258
+DE+DAALD + + +K K +QFI++SL+ MF ++ R + +N+T+
Sbjct: 1257 MDEIDAALDFKNVSIVANYIKERTKNAQFIVISLRSNMFELSS---RLVGIYKTANMTKS 1313
Query: 259 -TVNRK 263
T+N K
Sbjct: 1314 VTINNK 1319
Score = 48 (22.0 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 28/108 (25%), Positives = 51/108 (47%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMS 65
V K K+ ++ K E+ + Q+ L N +++ A LKT L S+ KY+
Sbjct: 951 VKDKLNKMSFKKKKNEQR-SQSFQVELSNLTSEYDTTTESIATLKTELQ-SLNKYVDEHK 1008
Query: 66 SFSVKV-GAM--VKAPLRTLL-FISMEAMTKKSIVESDRAKLLKVIEE 109
S + A+ + + + L+ FI E+ S V+++R +L I+E
Sbjct: 1009 SRLREFENALWDINSSIDELVKFIEFESKQMNS-VKAERIELENQIQE 1055
>UNIPROTKB|Q97QG7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 OMA:GDITKFI PIR:G95144 RefSeq:NP_345712.1
ProteinModelPortal:Q97QG7 EnsemblBacteria:EBSTRT00000025640
GeneID:931760 KEGG:spn:SP_1247 PATRIC:19706887
ProtClustDB:CLSK877065 Uniprot:Q97QG7
Length = 1179
Score = 180 (68.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 49/173 (28%), Positives = 86/173 (49%)
Query: 91 TKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGK 150
+++ + S + LL+ I E++++ K + + + F F + G QA L G
Sbjct: 1000 SQRDDILSAKNLLLETITEMNDEVKERFKSTFEVIRESFKVTFKQMFGGGQADLILTEGD 1059
Query: 151 DILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLS 210
+ G+E++V G +SL +SGG++ K P ILDEV+AALD +
Sbjct: 1060 LLTAGVEISVQPPGKKIQSLNLMSGGEKALSALALLFSIIRVKTIPFVILDEVEAALDEA 1119
Query: 211 HTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRK 263
+ + G L R K SQFI+V+ ++G + A+ I+ + S V++ V+ K
Sbjct: 1120 NVKRFGDYLNRFDKDSQFIVVTHRKGTMAAADSIYGVTMQE--SGVSKIVSVK 1170
>SGD|S000003610 [details] [associations]
symbol:SMC3 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0007130 "synaptonemal
complex assembly" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IMP] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 SGD:S000003610 Pfam:PF02463
GO:GO:0005524 GO:GO:0051301 EMBL:BK006943 GO:GO:0016887 EMBL:X88851
GO:GO:0030437 GO:GO:0007131 GO:GO:0007130 GO:GO:0007064
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0051177 GO:GO:0034990
HOGENOM:HOG000166512 KO:K06669 GeneTree:ENSGT00580000081628
OrthoDB:EOG4TB7KF EMBL:Y14278 EMBL:Z49349 PIR:S56850
RefSeq:NP_012461.1 ProteinModelPortal:P47037 SMR:P47037
DIP:DIP-2991N IntAct:P47037 MINT:MINT-435389 STRING:P47037
PaxDb:P47037 PeptideAtlas:P47037 EnsemblFungi:YJL074C GeneID:853371
KEGG:sce:YJL074C CYGD:YJL074c OMA:NIRMENI NextBio:973810
Genevestigator:P47037 GermOnline:YJL074C Uniprot:P47037
Length = 1230
Score = 148 (57.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 39/120 (32%), Positives = 58/120 (48%)
Query: 149 GKD---ILDGLEVNVAFGGLWKESLG--ELSGGQRXXXXXXXXXXXXXFKPAPLYILDEV 203
GKD + G+ ++V+F E L +LSGGQ+ PA Y+ DE+
Sbjct: 1097 GKDSEIMYTGVSISVSFNSKQNEQLHVEQLSGGQKTVCAIALILAIQMVDPASFYLFDEI 1156
Query: 204 DAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRK 263
DAALD + + +LK K +QFI + + M A+ FR K+ + S V VNR+
Sbjct: 1157 DAALDKQYRTAVATLLKELSKNAQFICTTFRTDMLQVADKFFRVKYENKISTVIE-VNRE 1215
Score = 82 (33.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 34/144 (23%), Positives = 66/144 (45%)
Query: 11 QKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLL--F--ISMKKYLGSMSS 66
+KL + +E+T+ KK L R EE Q ++ + P L+ F I+ + L ++
Sbjct: 924 KKLDNFQKSVEKTMIKKTTLVTRREELQQRIREIGLLPEDALVNDFSDITSDQLLQRLND 983
Query: 67 FSVKVGAMVKAPLRTLLFISMEAMTKKSIVES----DRAK--LLKVIEELDEKKKIALRE 120
+ ++ + R +K + E D +K + +I +L ++K A+
Sbjct: 984 MNTEISGLKNVNKRAFENFKKFNERRKDLAERASELDESKDSIQDLIVKLKQQKVNAVDS 1043
Query: 121 AWLKVNTDFGSIFSLLLPGSQAKL 144
+ KV+ +F ++F L+P AKL
Sbjct: 1044 TFQKVSENFEAVFERLVPRGTAKL 1067
Score = 46 (21.3 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFKVGAM 44
KLK K+E T KK Q++ E K+ M
Sbjct: 178 KLKASLKKMEETEQKKIQINKEMGELNSKLSEM 210
Score = 42 (19.8 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 93 KSIVESDRAKLLKVIEELDEKKK 115
KSI+E + KL K++ E K
Sbjct: 342 KSIIEQRKQKLSKILPRYQELTK 364
Score = 37 (18.1 bits), Expect = 6.5e-08, Sum P(3) = 6.5e-08
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 93 KSIVESDRAKLLKVIEELD 111
K++ ES R++ K++EELD
Sbjct: 689 KNLNES-RSQHKKILEELD 706
>WB|WBGene00004874 [details] [associations]
symbol:smc-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0051301 "cell
division" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0007276
"gamete generation" evidence=IMP] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0000775 GO:GO:0002119
GO:GO:0006281 GO:GO:0000910 GO:GO:0000070 GO:GO:0006310
GO:GO:0040035 GO:GO:0040039 GO:GO:0030261 GO:GO:0000793
GO:GO:0007276 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 EMBL:Z46242
PIR:T21809 RefSeq:NP_497935.1 ProteinModelPortal:Q20060 SMR:Q20060
IntAct:Q20060 STRING:Q20060 PaxDb:Q20060 EnsemblMetazoa:F35G12.8
GeneID:175603 KEGG:cel:CELE_F35G12.8 UCSC:F35G12.8 CTD:175603
WormBase:F35G12.8 HOGENOM:HOG000021360 InParanoid:Q20060
OMA:IAIEFLT NextBio:888868 Uniprot:Q20060
Length = 1549
Score = 177 (67.4 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 70/253 (27%), Positives = 116/253 (45%)
Query: 5 EVTRKYQKLK-EQRDKLERTVDKKA-QLSLRN-EENQFKVGAMVKAPLKTLLFISMKKYL 61
E T Y+ + E R +E D+K ++S R+ EE Q K+ K + + + K +
Sbjct: 1122 ENTESYENVDGEDRVPVELLSDEKINEISSRDAEEMQMKL----KVCEQQVEALKAKVDI 1177
Query: 62 GSMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREA 121
S+ ++ KV + ++ L I+ E K + E R K ++ +EE A
Sbjct: 1178 SSIKAYVDKVKQYNEQVIK--LTIATEVHRKHN-QELQRIKQMR-LEEF--------HSA 1225
Query: 122 WLKVNTDFGSIFSLLLPGSQAKLSPPAGKD-ILDGLEVNVAFGG-LWKESLGELSGGQRX 179
+ + ++F +L G AKL D G+ V WK+ + LSGG++
Sbjct: 1226 FEFIGKHLVAVFKMLTDGGDAKLEYIDKDDPFRQGISFMVRPAKKAWKQ-IQFLSGGEKT 1284
Query: 180 XXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFS 239
F+P P Y++DE+DAALD + I Q +++ + +QFII+SL+ MF
Sbjct: 1285 LSSLALIFALHMFRPTPFYVMDEIDAALDYRNVSIIAQYVRQKTENAQFIIISLRNNMFE 1344
Query: 240 NANVIFRTKFVDG 252
AN + VDG
Sbjct: 1345 LANRLVGIYKVDG 1357
>UNIPROTKB|Q20060 [details] [associations]
symbol:smc-4 "Structural maintenance of chromosomes protein
4" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0000775 GO:GO:0002119
GO:GO:0006281 GO:GO:0000910 GO:GO:0000070 GO:GO:0006310
GO:GO:0040035 GO:GO:0040039 GO:GO:0030261 GO:GO:0000793
GO:GO:0007276 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 EMBL:Z46242
PIR:T21809 RefSeq:NP_497935.1 ProteinModelPortal:Q20060 SMR:Q20060
IntAct:Q20060 STRING:Q20060 PaxDb:Q20060 EnsemblMetazoa:F35G12.8
GeneID:175603 KEGG:cel:CELE_F35G12.8 UCSC:F35G12.8 CTD:175603
WormBase:F35G12.8 HOGENOM:HOG000021360 InParanoid:Q20060
OMA:IAIEFLT NextBio:888868 Uniprot:Q20060
Length = 1549
Score = 177 (67.4 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 70/253 (27%), Positives = 116/253 (45%)
Query: 5 EVTRKYQKLK-EQRDKLERTVDKKA-QLSLRN-EENQFKVGAMVKAPLKTLLFISMKKYL 61
E T Y+ + E R +E D+K ++S R+ EE Q K+ K + + + K +
Sbjct: 1122 ENTESYENVDGEDRVPVELLSDEKINEISSRDAEEMQMKL----KVCEQQVEALKAKVDI 1177
Query: 62 GSMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREA 121
S+ ++ KV + ++ L I+ E K + E R K ++ +EE A
Sbjct: 1178 SSIKAYVDKVKQYNEQVIK--LTIATEVHRKHN-QELQRIKQMR-LEEF--------HSA 1225
Query: 122 WLKVNTDFGSIFSLLLPGSQAKLSPPAGKD-ILDGLEVNVAFGG-LWKESLGELSGGQRX 179
+ + ++F +L G AKL D G+ V WK+ + LSGG++
Sbjct: 1226 FEFIGKHLVAVFKMLTDGGDAKLEYIDKDDPFRQGISFMVRPAKKAWKQ-IQFLSGGEKT 1284
Query: 180 XXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFS 239
F+P P Y++DE+DAALD + I Q +++ + +QFII+SL+ MF
Sbjct: 1285 LSSLALIFALHMFRPTPFYVMDEIDAALDYRNVSIIAQYVRQKTENAQFIIISLRNNMFE 1344
Query: 240 NANVIFRTKFVDG 252
AN + VDG
Sbjct: 1345 LANRLVGIYKVDG 1357
>DICTYBASE|DDB_G0276101 [details] [associations]
symbol:smc3 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000785 "chromatin" evidence=ISS] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0276101 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0006275 GO:GO:0000785 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0046982 GO:GO:0007064 GO:GO:0008278
eggNOG:COG1196 SUPFAM:SSF75553 HSSP:P32908 KO:K06669
RefSeq:XP_643274.1 ProteinModelPortal:Q552D9 STRING:Q552D9
PRIDE:Q552D9 EnsemblProtists:DDB0219934 GeneID:8620317
KEGG:ddi:DDB_G0276101 InParanoid:Q552D9 OMA:EHERRES
ProtClustDB:CLSZ2734975 Uniprot:Q552D9
Length = 1437
Score = 145 (56.1 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 138 PGSQAKLSPPAGKDILDGLEVNVAFG-GLWKESLGELSGGQRXXXXXXXXXXXXXFKPAP 196
P A P G G+ + V+FG G S+ +LSGGQ+ PAP
Sbjct: 1062 PKEWADGETPKGLLTFTGIGIQVSFGEGHEPCSMRQLSGGQKTLVALALIFALQRTDPAP 1121
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+LDE+DAALD ++ + +M+++H + QFI + +AN + F G S +
Sbjct: 1122 FYLLDEIDAALDHNYRVAVSKMIRKHSREIQFIATTFGPEFVMDANQNWIVVFNKGGSKL 1181
Score = 80 (33.2 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 35/139 (25%), Positives = 62/139 (44%)
Query: 8 RKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLL--FISMKKYLGSMS 65
+K + L Q + D K QL + ++ ++F + K + + K L S+
Sbjct: 913 KKMESLLAQIQSFNKVRDAK-QLRVLSKGDRFNFEELKKYNKDQSVEELNKINKSLASLR 971
Query: 66 SFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKV 125
+ K + T + S+EA + + ES+ A + +I+ LD KK A+ + V
Sbjct: 972 HVNQKANDQFNS--FTNQYNSLEAR-RDELYESN-ASIQLLIKTLDNKKDEAIARTFSGV 1027
Query: 126 NTDFGSIFSLLLPGSQAKL 144
+F +F L+PG AKL
Sbjct: 1028 AKNFTQVFKELIPGGSAKL 1046
Score = 40 (19.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 7 TRKYQKLKEQRDKLERTVDKKAQLSLRNEENQ 38
T +Y L+ +RD+L + + QL ++ +N+
Sbjct: 985 TNQYNSLEARRDELYES-NASIQLLIKTLDNK 1015
>FB|FBgn0015391 [details] [associations]
symbol:glu "gluon" species:7227 "Drosophila melanogaster"
[GO:0007076 "mitotic chromosome condensation" evidence=ISS;NAS;IMP]
[GO:0000796 "condensin complex" evidence=ISS;NAS;TAS] [GO:0000166
"nucleotide binding" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0007422 "peripheral nervous system development"
evidence=TAS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000785 "chromatin" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0005694 "chromosome"
evidence=IDA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISS;NAS;IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0000819 "sister chromatid segregation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0007052
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 GO:GO:0007422
GO:GO:0000785 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 SUPFAM:SSF75553 HSSP:Q9X0R4 FlyBase:FBgn0015391
EMBL:AF185287 ProteinModelPortal:Q9U6I2 STRING:Q9U6I2 PRIDE:Q9U6I2
InParanoid:Q9U6I2 ArrayExpress:Q9U6I2 Bgee:Q9U6I2 Uniprot:Q9U6I2
Length = 1409
Score = 173 (66.0 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 45/165 (27%), Positives = 77/165 (46%)
Query: 96 VESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKD-ILD 154
+ S R ++ EE+ +++ + + + ++ ++ G A+L D +
Sbjct: 1128 ITSKRNEMRDKYEEVRKRRYKEFMDGFSIITRKLKEMYQMITLGGDAELELVDSMDPFTE 1187
Query: 155 GLEVNVAFGGL-WKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQ 213
G+ V WK + LSGG++ +KP+PLY +DE+DAALD +
Sbjct: 1188 GVNFTVRPPKKSWKY-ISNLSGGEKTLSSLALVFALHYYKPSPLYFMDEIDAALDFKNVS 1246
Query: 214 NIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRT-KFVDGNSNVT 257
+G +K K +QFIIVSL+ MF AN + K D ++T
Sbjct: 1247 IVGHYIKERTKNAQFIIVSLRVNMFELANFLVGIYKVSDCTDSIT 1291
Score = 41 (19.5 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 6/21 (28%), Positives = 16/21 (76%)
Query: 7 TRKYQKLKEQRDKLERTVDKK 27
+RKY+ LK ++ ++++++K
Sbjct: 522 SRKYETLKSSYEQSQKSLEEK 542
Score = 41 (19.5 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 11 QKLKEQRDKLERTVDKKAQLSLRNEENQFKV-GA 43
+KLK + + +KK +L EE++ + GA
Sbjct: 967 EKLKSLNEDRNKAKEKKEELEKEMEESEASIEGA 1000
>UNIPROTKB|F2Z5G2 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0000800
"lateral element" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0007052 GO:GO:0000785 GO:GO:0016363 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0000800 SUPFAM:SSF75553
GO:GO:0030893 OMA:NKVLEHF GeneTree:ENSGT00580000081628
EMBL:CT737341 EMBL:CU468424 Ensembl:ENSSSCT00000011621
Uniprot:F2Z5G2
Length = 934
Score = 136 (52.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 797 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 855
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ +QFI + + + +A+ + KF + S++
Sbjct: 856 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHI 915
Score = 77 (32.2 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 638 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 697
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 698 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 757
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 758 SEVFQKLVPGGKATL 772
Score = 44 (20.5 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 167 ELDRKYYEVKNKKDELQ 183
Score = 41 (19.5 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 173 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 223
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 105 KVIEELDEKKKIALREAWLKVNT 127
K++E+++EK+K L E K N+
Sbjct: 49 KLLEKIEEKQK-ELAETEPKFNS 70
>UNIPROTKB|F1NEA6 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0051276 SUPFAM:SSF75553 GeneTree:ENSGT00580000081628
EMBL:AADN02030887 EMBL:AADN02030888 IPI:IPI00684346
Ensembl:ENSGALT00000033118 ArrayExpress:F1NEA6 Uniprot:F1NEA6
Length = 1217
Score = 139 (54.0 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1080 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1138
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ + +QFI + + + +A+ + KF + S++
Sbjct: 1139 FYLFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1198
Score = 77 (32.2 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 1041 SEVFQKLVPGGKATL 1055
Score = 48 (22.0 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>UNIPROTKB|F1NYB2 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007052 "mitotic spindle organization" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0007052 GO:GO:0000785 GO:GO:0016363 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0000800 SUPFAM:SSF75553
GO:GO:0030893 OMA:NKVLEHF GeneTree:ENSGT00580000081628
EMBL:AADN02030887 EMBL:AADN02030888 IPI:IPI00598955
Ensembl:ENSGALT00000013979 ArrayExpress:F1NYB2 Uniprot:F1NYB2
Length = 1219
Score = 139 (54.0 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 34/120 (28%), Positives = 59/120 (49%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1082 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1140
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ + +QFI + + + +A+ + KF + S++
Sbjct: 1141 FYLFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1200
Score = 77 (32.2 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 923 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 982
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 983 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1042
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 1043 SEVFQKLVPGGKATL 1057
Score = 48 (22.0 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 232 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKIS-AMKE--- 287
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 288 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 344
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 345 LAETEPKFNS 354
Score = 44 (20.5 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 451 ELDRKYYEVKNKKDELQ 467
Score = 41 (19.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 457 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 507
>UNIPROTKB|O97593 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0042770 "signal transduction in
response to DNA damage" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0036033 "mediator
complex binding" evidence=IEA] [GO:0032876 "negative regulation of
DNA endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 GO:GO:0005737 GO:GO:0000776 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030893 EMBL:AF072712 IPI:IPI00687474 PIR:S71602
RefSeq:NP_777039.1 UniGene:Bt.109789 ProteinModelPortal:O97593
STRING:O97593 PRIDE:O97593 GeneID:282370 KEGG:bta:282370 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 InParanoid:O97593 KO:K06636
OrthoDB:EOG4HX507 NextBio:20806162 Uniprot:O97593
Length = 1233
Score = 157 (60.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1051 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1110
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1111 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1170
Query: 216 GQMLKRHFKTS-QFIIVSLKEGMFSNA 241
+K + Q I++SLKE ++ A
Sbjct: 1171 ANYIKEQSTCNFQAIVISLKEEFYTKA 1197
Score = 59 (25.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E +K +E D+ ++ KV +EL EKKK
Sbjct: 238 LNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 8 RKYQKLKEQRDKLERTV---------DKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK 58
+KY +LKE+ K T+ D+KA + E + KV K K +
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQ 432
Query: 59 KYLGSMSSF--SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKK 114
K + + + + K + L L +E M K+ I E ++ +L +V+E+L + +
Sbjct: 433 KRIEKLEEYITTSKQSLEEQKKLEGELTEEVE-MAKRRIDEINK-ELNQVMEQLGDAR 488
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE++++L T + K Q+ + +E + +
Sbjct: 673 KLKEKKERL--TEELKEQMKAKRKEAELR 699
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 5 EVTRKYQKLKEQRDKLERTV--DKKAQLSLRNEENQFK 40
E+ QKL EQ+ L+R + KA L + ++F+
Sbjct: 1002 EMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQ 1039
Score = 38 (18.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1029 EKLESVRDKFQETSDE 1044
>UNIPROTKB|E2QV07 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 CTD:8243 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 EMBL:AAEX03026385 RefSeq:XP_538049.3
Ensembl:ENSCAFT00000025795 GeneID:480928 KEGG:cfa:480928
Uniprot:E2QV07
Length = 1233
Score = 157 (60.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1051 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1110
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1111 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1170
Query: 216 GQMLKRHFKTS-QFIIVSLKEGMFSNA 241
+K + Q I++SLKE ++ A
Sbjct: 1171 ANYIKEQSTCNFQAIVISLKEEFYTKA 1197
Score = 59 (25.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E +K +E D+ ++ KV +EL EKKK
Sbjct: 238 LNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 8 RKYQKLKEQRDKLERTV---------DKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK 58
+KY +LKE+ K T+ D+KA + E + KV K K +
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQ 432
Query: 59 KYLGSMSSF--SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKK 114
K + + + + K + L L +E M K+ I E ++ +L +V+E+L + +
Sbjct: 433 KRIEKLEEYITTSKQSLEEQKKLEGELTEEVE-MAKRRIDEINK-ELNQVMEQLGDAR 488
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE++++L T + K Q+ + +E + +
Sbjct: 673 KLKEKKERL--TEELKEQMKAKRKEAELR 699
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 5 EVTRKYQKLKEQRDKLERTV--DKKAQLSLRNEENQFK 40
E+ QKL EQ+ L+R + KA L + ++F+
Sbjct: 1002 EMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQ 1039
Score = 38 (18.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1029 EKLESVRDKFQETSDE 1044
>UNIPROTKB|Q14683 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0042770
"signal transduction in response to DNA damage" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=IDA] [GO:0009314 "response to radiation"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008280 "cohesin core heterodimer" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=TAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=TAS] [GO:0000776 "kinetochore" evidence=IDA] [GO:0007126
"meiosis" evidence=ISS] [GO:0000070 "mitotic sister chromatid
segregation" evidence=TAS] [GO:0030893 "meiotic cohesin complex"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007091 "metaphase/anaphase transition of mitotic
cell cycle" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_21300
GO:GO:0000776 GO:GO:0051301 GO:GO:0007052 GO:GO:0006281
Reactome:REACT_1675 GO:GO:0003682 GO:GO:0042770
Reactome:REACT_111183 GO:GO:0006310 GO:GO:0000794 GO:GO:0030261
GO:GO:0009314 GO:GO:0003777 GO:GO:0032876 GO:GO:0007091
GO:GO:0000398 GO:GO:0000075 GO:GO:0000236 GO:GO:0000777
GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553 EMBL:Z97054
Orphanet:199 EMBL:AL161779 GO:GO:0030893 GO:GO:0008280 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:S78271 EMBL:D80000 EMBL:BC112127 IPI:IPI00291939 PIR:I54383
RefSeq:NP_006297.2 UniGene:Hs.211602 ProteinModelPortal:Q14683
SMR:Q14683 DIP:DIP-30911N IntAct:Q14683 MINT:MINT-233274
STRING:Q14683 PhosphoSite:Q14683 DMDM:29336622 PaxDb:Q14683
PeptideAtlas:Q14683 PRIDE:Q14683 Ensembl:ENST00000322213
GeneID:8243 KEGG:hsa:8243 UCSC:uc004dsg.3 GeneCards:GC0XM053417
HGNC:HGNC:11111 HPA:CAB025404 HPA:HPA005499 MIM:300040 MIM:300590
neXtProt:NX_Q14683 PharmGKB:PA35961 InParanoid:Q14683 OMA:NALVCET
PhylomeDB:Q14683 ChiTaRS:SMC1A GenomeRNAi:8243 NextBio:31006
ArrayExpress:Q14683 Bgee:Q14683 CleanEx:HS_SMC1A
Genevestigator:Q14683 GermOnline:ENSG00000072501 Uniprot:Q14683
Length = 1233
Score = 157 (60.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1051 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1110
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1111 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1170
Query: 216 GQMLKRHFKTS-QFIIVSLKEGMFSNA 241
+K + Q I++SLKE ++ A
Sbjct: 1171 ANYIKEQSTCNFQAIVISLKEEFYTKA 1197
Score = 59 (25.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E +K +E D+ ++ KV +EL EKKK
Sbjct: 238 LNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 8 RKYQKLKEQRDKLERTV---------DKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK 58
+KY +LKE+ K T+ D+KA + E + KV K K +
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQ 432
Query: 59 KYLGSMSSF--SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKK 114
K + + + + K + L L +E M K+ I E ++ +L +V+E+L + +
Sbjct: 433 KRIEKLEEYITTSKQSLEEQKKLEGELTEEVE-MAKRRIDEINK-ELNQVMEQLGDAR 488
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE++++L T + K Q+ + +E + +
Sbjct: 673 KLKEKKERL--TEELKEQMKAKRKEAELR 699
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 5 EVTRKYQKLKEQRDKLERTV--DKKAQLSLRNEENQFK 40
E+ QKL EQ+ L+R + KA L + ++F+
Sbjct: 1002 EMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQ 1039
Score = 38 (18.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1029 EKLESVRDKFQETSDE 1044
>UNIPROTKB|F2Z5A8 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 EMBL:GACC01000120 RefSeq:XP_003135172.3
Ensembl:ENSSSCT00000013478 GeneID:100523938 KEGG:ssc:100523938
Uniprot:F2Z5A8
Length = 1233
Score = 157 (60.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1051 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1110
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1111 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1170
Query: 216 GQMLKRHFKTS-QFIIVSLKEGMFSNA 241
+K + Q I++SLKE ++ A
Sbjct: 1171 ANYIKEQSTCNFQAIVISLKEEFYTKA 1197
Score = 59 (25.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E +K +E D+ ++ KV +EL EKKK
Sbjct: 238 LNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 8 RKYQKLKEQRDKLERTV---------DKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK 58
+KY +LKE+ K T+ D+KA + E + KV K K +
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQ 432
Query: 59 KYLGSMSSF--SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKK 114
K + + + + K + L L +E M K+ I E ++ +L +V+E+L + +
Sbjct: 433 KRIEKLEEYITTSKQSLEEQKKLEGELTEEVE-MAKRRIDEINK-ELNQVMEQLGDAR 488
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE++++L T + K Q+ + +E + +
Sbjct: 673 KLKEKKERL--TEELKEQMKAKRKEAELR 699
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 5 EVTRKYQKLKEQRDKLERTV--DKKAQLSLRNEENQFK 40
E+ QKL EQ+ L+R + KA L + ++F+
Sbjct: 1002 EMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQ 1039
Score = 38 (18.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1029 EKLESVRDKFQETSDE 1044
>MGI|MGI:1344345 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10090 "Mus musculus" [GO:0000075 "cell cycle checkpoint"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;IDA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=IDA] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=ISO] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:1344345 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0005654 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
GO:GO:0006281 GO:GO:0003682 GO:GO:0042770 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030261 GO:GO:0009314 GO:GO:0032876 GO:GO:0019827
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:AL672180 GO:GO:0036033 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AF047600 EMBL:BC131667 EMBL:AK007334 EMBL:AK013648
EMBL:AK017948 EMBL:AK088183 IPI:IPI00123870 RefSeq:NP_062684.2
UniGene:Mm.482095 PDB:2WD5 PDBsum:2WD5 ProteinModelPortal:Q9CU62
SMR:Q9CU62 DIP:DIP-57021N IntAct:Q9CU62 STRING:Q9CU62
PhosphoSite:Q9CU62 PaxDb:Q9CU62 PRIDE:Q9CU62
Ensembl:ENSMUST00000045312 GeneID:24061 KEGG:mmu:24061
GeneTree:ENSGT00580000081569 InParanoid:A2AFQ5
EvolutionaryTrace:Q9CU62 NextBio:304025 Bgee:Q9CU62
CleanEx:MM_SMC1A Genevestigator:Q9CU62
GermOnline:ENSMUSG00000041133 Uniprot:Q9CU62
Length = 1233
Score = 157 (60.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1051 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1110
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1111 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1170
Query: 216 GQMLKRHFKTS-QFIIVSLKEGMFSNA 241
+K + Q I++SLKE ++ A
Sbjct: 1171 ANYIKEQSTCNFQAIVISLKEEFYTKA 1197
Score = 59 (25.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E +K +E D+ ++ KV +EL EKKK
Sbjct: 238 LNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 8 RKYQKLKEQRDKLERTV---------DKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK 58
+KY +LKE+ K T+ D+KA + E + KV K K +
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQ 432
Query: 59 KYLGSMSSF--SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKK 114
K + + + + K + L L +E M K+ I E ++ +L +V+E+L + +
Sbjct: 433 KRIEKLEEYITTSKQSLEEQKKLEGELTEEVE-MAKRRIDEINK-ELNQVMEQLGDAR 488
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE++++L T + K Q+ + +E + +
Sbjct: 673 KLKEKKERL--TEELKEQMKAKRKEAELR 699
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 5 EVTRKYQKLKEQRDKLERTV--DKKAQLSLRNEENQFK 40
E+ QKL EQ+ L+R + KA L + ++F+
Sbjct: 1002 EMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQ 1039
Score = 38 (18.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1029 EKLESVRDKFQETSDE 1044
>RGD|61991 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10116 "Rattus norvegicus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO;ISS] [GO:0000776 "kinetochore"
evidence=ISO;ISS] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IDA] [GO:0009314 "response to radiation"
evidence=ISO;ISS] [GO:0019827 "stem cell maintenance" evidence=ISO]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 157 (60.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1051 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1110
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1111 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1170
Query: 216 GQMLKRHFKTS-QFIIVSLKEGMFSNA 241
+K + Q I++SLKE ++ A
Sbjct: 1171 ANYIKEQSTCNFQAIVISLKEEFYTKA 1197
Score = 59 (25.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E +K +E D+ ++ KV +EL EKKK
Sbjct: 238 LNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 8 RKYQKLKEQRDKLERTV---------DKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK 58
+KY +LKE+ K T+ D+KA + E + KV K K +
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQ 432
Query: 59 KYLGSMSSF--SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKK 114
K + + + + K + L L +E M K+ I E ++ +L +V+E+L + +
Sbjct: 433 KRIEKLEEYITTSKQSLEEQKKLEGELTEEVE-MAKRRIDEINK-ELNQVMEQLGDAR 488
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE++++L T + K Q+ + +E + +
Sbjct: 673 KLKEKKERL--TEELKEQMKAKRKEAELR 699
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 5 EVTRKYQKLKEQRDKLERTV--DKKAQLSLRNEENQFK 40
E+ QKL EQ+ L+R + KA L + ++F+
Sbjct: 1002 EMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQ 1039
Score = 38 (18.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1029 EKLESVRDKFQETSDE 1044
>UNIPROTKB|Q9Z1M9 [details] [associations]
symbol:Smc1a "Structural maintenance of chromosomes protein
1A" species:10116 "Rattus norvegicus" [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 157 (60.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1051 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1110
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1111 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1170
Query: 216 GQMLKRHFKTS-QFIIVSLKEGMFSNA 241
+K + Q I++SLKE ++ A
Sbjct: 1171 ANYIKEQSTCNFQAIVISLKEEFYTKA 1197
Score = 59 (25.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E +K +E D+ ++ KV +EL EKKK
Sbjct: 238 LNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 8 RKYQKLKEQRDKLERTV---------DKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK 58
+KY +LKE+ K T+ D+KA + E + KV K K +
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQ 432
Query: 59 KYLGSMSSF--SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKK 114
K + + + + K + L L +E M K+ I E ++ +L +V+E+L + +
Sbjct: 433 KRIEKLEEYITTSKQSLEEQKKLEGELTEEVE-MAKRRIDEINK-ELNQVMEQLGDAR 488
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE++++L T + K Q+ + +E + +
Sbjct: 673 KLKEKKERL--TEELKEQMKAKRKEAELR 699
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 5 EVTRKYQKLKEQRDKLERTV--DKKAQLSLRNEENQFK 40
E+ QKL EQ+ L+R + KA L + ++F+
Sbjct: 1002 EMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQ 1039
Score = 38 (18.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1029 EKLESVRDKFQETSDE 1044
>UNIPROTKB|I3LMC6 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 OMA:NALVCET GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 Ensembl:ENSSSCT00000028659
Uniprot:I3LMC6
Length = 1235
Score = 157 (60.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1053 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1112
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1113 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1172
Query: 216 GQMLKRHFKTS-QFIIVSLKEGMFSNA 241
+K + Q I++SLKE ++ A
Sbjct: 1173 ANYIKEQSTCNFQAIVISLKEEFYTKA 1199
Score = 59 (25.8 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E +K +E D+ ++ KV +EL EKKK
Sbjct: 238 LNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Score = 43 (20.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 8 RKYQKLKEQRDKLERTV---------DKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK 58
+KY +LKE+ K T+ D+KA + E + KV K K +
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQ 432
Query: 59 KYLGSMSSF--SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKK 114
K + + + + K + L L +E M K+ I E ++ +L +V+E+L + +
Sbjct: 433 KRIEKLEEYITTSKQSLEEQKKLEGELTEEVE-MAKRRIDEINK-ELNQVMEQLGDAR 488
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE++++L T + K Q+ + +E + +
Sbjct: 673 KLKEKKERL--TEELKEQMKAKRKEAELR 699
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 5 EVTRKYQKLKEQRDKLERTV--DKKAQLSLRNEENQFK 40
E+ QKL EQ+ L+R + KA L + ++F+
Sbjct: 1004 EMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQ 1041
Score = 38 (18.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1031 EKLESVRDKFQETSDE 1046
>UNIPROTKB|A7Z065 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0007052 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 GO:GO:0030893 OMA:NKVLEHF IPI:IPI00698576
UniGene:Bt.5290 HOVERGEN:HBG039849 GeneTree:ENSGT00580000081628
EMBL:DAAA02059205 EMBL:BC153263 SMR:A7Z065 STRING:A7Z065
Ensembl:ENSBTAT00000046231 InParanoid:A7Z065 Uniprot:A7Z065
Length = 1217
Score = 136 (52.9 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1080 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1138
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ +QFI + + + +A+ + KF + S++
Sbjct: 1139 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1198
Score = 77 (32.2 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 1041 SEVFQKLVPGGKATL 1055
Score = 47 (21.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>UNIPROTKB|E2R7T4 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553 KO:K06669 OMA:NKVLEHF
CTD:9126 GeneTree:ENSGT00580000081628 EMBL:AAEX03015526
RefSeq:XP_851818.2 ProteinModelPortal:E2R7T4
Ensembl:ENSCAFT00000017137 GeneID:486886 KEGG:cfa:486886
Uniprot:E2R7T4
Length = 1217
Score = 136 (52.9 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1080 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1138
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ +QFI + + + +A+ + KF + S++
Sbjct: 1139 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1198
Score = 77 (32.2 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 1041 SEVFQKLVPGGKATL 1055
Score = 47 (21.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>UNIPROTKB|Q9UQE7 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0036033
"mediator complex binding" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007052 "mitotic spindle organization"
evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP;NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0008278 "cohesin complex"
evidence=NAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007165 "signal transduction" evidence=IDA]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0007126 "meiosis" evidence=IDA]
[GO:0006275 "regulation of DNA replication" evidence=IMP]
[GO:0000785 "chromatin" evidence=IDA] [GO:0030893 "meiotic cohesin
complex" evidence=IDA] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0007067 "mitosis" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007091 "metaphase/anaphase
transition of mitotic cell cycle" evidence=TAS] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0007165 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0000775 GO:GO:0051301 GO:GO:0007052
EMBL:CH471066 GO:GO:0006281 GO:GO:0000785 Reactome:REACT_111183
GO:GO:0016363 GO:GO:0005604 GO:GO:0000922 GO:GO:0003777
GO:GO:0032876 GO:GO:0007091 GO:GO:0000236 GO:GO:0045502
GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
Orphanet:199 GO:GO:0030893 EMBL:AL359260 HOGENOM:HOG000166512
KO:K06669 OMA:NKVLEHF CTD:9126 HOVERGEN:HBG039849 OrthoDB:EOG4B5P4C
EMBL:AF020043 EMBL:AK289771 EMBL:AF067163 EMBL:AJ005015
IPI:IPI00219420 RefSeq:NP_005436.1 UniGene:Hs.24485
ProteinModelPortal:Q9UQE7 SMR:Q9UQE7 DIP:DIP-29200N IntAct:Q9UQE7
MINT:MINT-3083875 STRING:Q9UQE7 PhosphoSite:Q9UQE7 DMDM:29337005
PaxDb:Q9UQE7 PRIDE:Q9UQE7 Ensembl:ENST00000361804 GeneID:9126
KEGG:hsa:9126 UCSC:uc001kze.3 GeneCards:GC10P112318 HGNC:HGNC:2468
HPA:HPA037411 MIM:606062 MIM:610759 neXtProt:NX_Q9UQE7
PharmGKB:PA26966 InParanoid:Q9UQE7 ChiTaRS:SMC3 GenomeRNAi:9126
NextBio:34209 Bgee:Q9UQE7 CleanEx:HS_SMC3 Genevestigator:Q9UQE7
GermOnline:ENSG00000108055 Uniprot:Q9UQE7
Length = 1217
Score = 136 (52.9 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1080 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1138
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ +QFI + + + +A+ + KF + S++
Sbjct: 1139 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1198
Score = 77 (32.2 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 1041 SEVFQKLVPGGKATL 1055
Score = 47 (21.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>UNIPROTKB|Q5R4K5 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9601 "Pongo abelii" [GO:0000785 "chromatin"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0006275 GO:GO:0006281 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 GO:GO:0030893 KO:K06669 OMA:NKVLEHF CTD:9126
HOVERGEN:HBG039849 GeneTree:ENSGT00580000081628 EMBL:CR861241
RefSeq:NP_001126947.1 UniGene:Pab.18502 ProteinModelPortal:Q5R4K5
SMR:Q5R4K5 PRIDE:Q5R4K5 Ensembl:ENSPPYT00000003185 GeneID:100173965
KEGG:pon:100173965 InParanoid:Q5R4K5 Uniprot:Q5R4K5
Length = 1217
Score = 136 (52.9 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1080 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1138
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ +QFI + + + +A+ + KF + S++
Sbjct: 1139 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1198
Score = 77 (32.2 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 1041 SEVFQKLVPGGKATL 1055
Score = 47 (21.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>MGI|MGI:1339795 [details] [associations]
symbol:Smc3 "structural maintenance of chromosomes 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000785 "chromatin" evidence=ISO] [GO:0000800
"lateral element" evidence=IDA] [GO:0000922 "spindle pole"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006275 "regulation of DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0016363 "nuclear matrix" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0030893 "meiotic cohesin complex"
evidence=ISO;IDA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IDA] [GO:0036033 "mediator complex
binding" evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 MGI:MGI:1339795 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0005654 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0006275 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0016363 GO:GO:0005604 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0019827 GO:GO:0045502
GO:GO:0000800 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0036033
GO:GO:0034991 PDB:2WD5 PDBsum:2WD5 HOGENOM:HOG000166512 KO:K06669
OMA:NKVLEHF CTD:9126 HOVERGEN:HBG039849 OrthoDB:EOG4B5P4C
ChiTaRS:SMC3 EMBL:AF141294 EMBL:AF047601 EMBL:Y15128 EMBL:AK005647
IPI:IPI00132122 RefSeq:NP_031816.2 UniGene:Mm.14910
ProteinModelPortal:Q9CW03 SMR:Q9CW03 DIP:DIP-57028N IntAct:Q9CW03
STRING:Q9CW03 PhosphoSite:Q9CW03 PaxDb:Q9CW03 PRIDE:Q9CW03
Ensembl:ENSMUST00000025930 GeneID:13006 KEGG:mmu:13006
GeneTree:ENSGT00580000081628 InParanoid:Q9CW03
EvolutionaryTrace:Q9CW03 NextBio:282832 Bgee:Q9CW03 CleanEx:MM_SMC3
Genevestigator:Q9CW03 GermOnline:ENSMUSG00000024974 Uniprot:Q9CW03
Length = 1217
Score = 136 (52.9 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1080 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1138
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ +QFI + + + +A+ + KF + S++
Sbjct: 1139 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1198
Score = 77 (32.2 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 1041 SEVFQKLVPGGKATL 1055
Score = 47 (21.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>UNIPROTKB|D4A1B9 [details] [associations]
symbol:Smc3 "Structural maintenance of chromosomes protein
3" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0036033 "mediator complex
binding" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051276 "chromosome organization" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:62006 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0007052 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 EMBL:CH473986 GO:GO:0030893 KO:K06669 CTD:9126
OrthoDB:EOG4B5P4C GeneTree:ENSGT00580000081628 UniGene:Rn.11074
IPI:IPI00780283 RefSeq:NP_113771.2 SMR:D4A1B9
Ensembl:ENSRNOT00000019560 GeneID:29486 KEGG:rno:29486
NextBio:609354 Uniprot:D4A1B9
Length = 1217
Score = 136 (52.9 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1080 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1138
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ +QFI + + + +A+ + KF + S++
Sbjct: 1139 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1198
Score = 77 (32.2 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 1041 SEVFQKLVPGGKATL 1055
Score = 47 (21.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>UNIPROTKB|Q10970 [details] [associations]
symbol:smc "Chromosome partition protein Smc" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 GO:GO:0005694 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:BX842581 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K03529
TIGRFAMs:TIGR02168 EMBL:AJ414609 PIR:B70748 RefSeq:NP_217438.2
RefSeq:NP_337503.1 RefSeq:YP_006516375.1 ProteinModelPortal:Q10970
SMR:Q10970 PhosSite:P12071629 PRIDE:Q10970
EnsemblBacteria:EBMYCT00000000305 EnsemblBacteria:EBMYCT00000069167
GeneID:13317715 GeneID:887179 GeneID:925284 KEGG:mtc:MT2990
KEGG:mtu:Rv2922c KEGG:mtv:RVBD_2922c PATRIC:18128344
TubercuList:Rv2922c HOGENOM:HOG000036389 OMA:GDITKFI
ProtClustDB:CLSK881165 Uniprot:Q10970
Length = 1205
Score = 169 (64.5 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 44/174 (25%), Positives = 86/174 (49%)
Query: 91 TKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGK 150
T+ V++ R LL V+ ++D + +A++ V +F +F+ L PG + +L
Sbjct: 1020 TQLEDVKAARKDLLGVVADVDARILQVFNDAFVDVEREFRGVFTALFPGGEGRLRLTEPD 1079
Query: 151 DILD-GLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDL 209
D+L G+EV G L LSGG++ +P+P YI+DEV+AALD
Sbjct: 1080 DMLTTGIEVEARPPGKKITRLSLLSGGEKALTAVAMLVAIFRARPSPFYIMDEVEAALDD 1139
Query: 210 SHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRK 263
+ + + + ++ + SQ II++ ++ A+ ++ N +T ++++
Sbjct: 1140 VNLRRLLSLFEQLREQSQIIIITHQKPTMEVADALYGVTMQ--NDGITAVISQR 1191
>UNIPROTKB|F1SM58 [details] [associations]
symbol:F1SM58 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR024704 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005634 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 GeneTree:ENSGT00580000081569
EMBL:CU856016 EMBL:CU633534 Ensembl:ENSSSCT00000000014
Uniprot:F1SM58
Length = 1233
Score = 169 (64.5 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 64/247 (25%), Positives = 105/247 (42%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSM 64
E T+ + EQ + +E VD LR + + V+A LK LL + + S
Sbjct: 958 ESTQATTDVYEQEEAIE--VDYSL---LREDLRALQTDKEVEAHLKLLL-----QQVASQ 1007
Query: 65 SSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIA---LREA 121
+K A L L + + E+ R + +E ++ KK +
Sbjct: 1008 EDILLKTAAPNLRALENLKAVRDKLQESTDAFEASRKEARMCRQEFEQVKKRRYDLFSQC 1067
Query: 122 WLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDGLEVNVAFGGLWKESLGELSGGQR 178
+ V+ I+ L + QA LSP ++ L+G+ N G + LSGG++
Sbjct: 1068 FEHVSVSIDQIYKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEK 1127
Query: 179 XXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTS-QFIIVSLKEGM 237
F+PAP ++LDEVDAALD ++ + +K + Q II+SLKE
Sbjct: 1128 CVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEEF 1187
Query: 238 FSNANVI 244
+S A+ +
Sbjct: 1188 YSKADAL 1194
>UNIPROTKB|O97594 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=ISS] [GO:0006275
"regulation of DNA replication" evidence=ISS] [GO:0000922 "spindle
pole" evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0007052 "mitotic
spindle organization" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0045502 "dynein binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051276 "chromosome organization" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0006275 GO:GO:0006281 GO:GO:0000785
GO:GO:0016363 GO:GO:0000922 GO:GO:0051276 GO:GO:0045502
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
KO:K06669 EMBL:AF072713 IPI:IPI00698576 RefSeq:NP_776720.1
UniGene:Bt.5290 ProteinModelPortal:O97594 STRING:O97594
PRIDE:O97594 GeneID:281729 KEGG:bta:281729 CTD:9126
HOVERGEN:HBG039849 InParanoid:O97594 OrthoDB:EOG4B5P4C
NextBio:20805649 Uniprot:O97594
Length = 1218
Score = 134 (52.2 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS + S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1081 GSGPQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1139
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ +QFI + + + +A+ + KF + S++
Sbjct: 1140 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1199
Score = 77 (32.2 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 1041 SEVFQKLVPGGKATL 1055
Score = 47 (21.6 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>ZFIN|ZDB-GENE-090506-9 [details] [associations]
symbol:smc1a "structural maintenance of chromosomes
1A" species:7955 "Danio rerio" [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-090506-9 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 CTD:8243 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CR354431 IPI:IPI00506664 RefSeq:NP_001155103.1
UniGene:Dr.120420 Ensembl:ENSDART00000078148 GeneID:559665
KEGG:dre:559665 OMA:ERIRHAN NextBio:20883076 Uniprot:E7F0X6
Length = 1232
Score = 159 (61.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 43/148 (29%), Positives = 72/148 (48%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1051 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1110
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1111 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1170
Query: 216 GQMLK-RHFKTSQFIIVSLKEGMFSNAN 242
+K + + Q I++SLKE ++ A+
Sbjct: 1171 ANYIKDQSVQNFQAIVISLKEEFYTKAD 1198
Score = 50 (22.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E + ++ DR K+ V EEL +KKK
Sbjct: 238 LNRELSQRNREIDKDRKKMDHVEEELKDKKK 268
Score = 45 (20.9 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE+++KL T + K Q+ + +E + +
Sbjct: 673 KLKEKKEKL--TEELKEQMKAKRKEAELR 699
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1029 EKLESVRDKFQETSDE 1044
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 11/52 (21%), Positives = 28/52 (53%)
Query: 8 RKYQKLKEQRDKLERTVDKKAQLSLRNEE-NQFKVGAMVKAPLKTLLFISMK 58
++Y +LKE+ K T+ ++ + R+++ +Q ++ + ++T I K
Sbjct: 373 KQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAKIKQK 424
>ZFIN|ZDB-GENE-040426-57 [details] [associations]
symbol:smc1al "structural maintenance of chromosomes
1A, like" species:7955 "Danio rerio" [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-040426-57 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
GeneTree:ENSGT00580000081569 EMBL:CR376802 EMBL:CT025883
EMBL:AY648730 IPI:IPI00501499 RefSeq:NP_997975.2 UniGene:Dr.76942
STRING:Q6DRM9 Ensembl:ENSDART00000081016 GeneID:403060
KEGG:dre:403060 CTD:403060 InParanoid:Q6DRM9 OMA:NIGEVAN
NextBio:20816857 Uniprot:Q6DRM9
Length = 1233
Score = 159 (61.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 43/148 (29%), Positives = 72/148 (48%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1052 RAKKAKQAFEQIKKERFDRFHACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1111
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1112 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1171
Query: 216 GQMLK-RHFKTSQFIIVSLKEGMFSNAN 242
+K + + Q I++SLKE ++ A+
Sbjct: 1172 ANYIKDQSVQNFQAIVISLKEEFYTKAD 1199
Score = 50 (22.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E + ++ DR ++ +V EEL +KKK
Sbjct: 238 LNRELAHRNKEIDKDRKRMDRVEEELKDKKK 268
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1030 EKLESVRDKFQETSDE 1045
Score = 36 (17.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 11/52 (21%), Positives = 27/52 (51%)
Query: 8 RKYQKLKEQRDKLERTVDKKAQLSLRNEE-NQFKVGAMVKAPLKTLLFISMK 58
+ Y +LKE+ K T+ ++ + R+++ +Q ++ + ++T I K
Sbjct: 373 KAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKIETEAKIKQK 424
>UNIPROTKB|O93308 [details] [associations]
symbol:smc1a "Structural maintenance of chromosomes protein
1A" species:8355 "Xenopus laevis" [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0030893 "meiotic cohesin
complex" evidence=ISS] [GO:0042770 "signal transduction in response
to DNA damage" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039593 EMBL:AF051784
RefSeq:NP_001165905.1 UniGene:Xl.4734 ProteinModelPortal:O93308
IntAct:O93308 GeneID:100379087 KEGG:xla:100379087 CTD:100379087
Uniprot:O93308
Length = 1232
Score = 155 (59.6 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 44/147 (29%), Positives = 71/147 (48%)
Query: 100 RAKLLKVIEELDEKKKIALREAWLK-VNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E +K++ A + V T+ I+ L S QA L P ++ LDG
Sbjct: 1051 RAKKAKQAFEQTKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1110
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSGG++ +KP+P ++LDE+DAALD ++ +
Sbjct: 1111 INYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHSYKPSPFFVLDEIDAALDNTNIGKV 1170
Query: 216 GQMLKRHFKTS-QFIIVSLKEGMFSNA 241
+K ++ Q I++SLKE ++ A
Sbjct: 1171 ANYIKEQSMSNFQAIVISLKEEFYTKA 1197
Score = 54 (24.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E K +E D+ + KV EEL +KKK
Sbjct: 238 LNKELSVKNKGIEKDKKHMDKVEEELKDKKK 268
Score = 44 (20.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 8 RKYQKLKEQRDKLERTV---------DKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK 58
+KY +LKE+ K T+ D+KA + E + KV K K +
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLRELEENQ 432
Query: 59 KYLGSMSSF--SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKK 114
K + + + + K + L L +E M K+ I E + ++L +V+E+L + +
Sbjct: 433 KRIEKLEEYIATSKQSLEEQKNLEETLTEEVE-MAKRRIDEIN-SELNQVMEQLGDAR 488
Score = 42 (19.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE++++L T + K Q+ + +E + +
Sbjct: 673 KLKEKKERL--TEELKEQMKAKRKEAELR 699
Score = 42 (19.8 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 5 EVTRKYQKLKEQRDKLER--TVDKKAQLSLRNEENQFK 40
E++ +QK+ EQ+ L+R + KA L + ++F+
Sbjct: 1002 EMSALHQKINEQQSILQRISAPNMKAMEKLESVRDKFQ 1039
Score = 39 (18.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 8 RKYQKLKEQRDKLER---TVDKKAQ-LSLRNEENQFKVG 42
++Y+K K D+LE+ +V+K Q R EE G
Sbjct: 324 KQYKKRKADMDELEKEMLSVEKARQEFEERMEEESQSQG 362
Score = 38 (18.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1029 EKLESVRDKFQETSDE 1044
Score = 38 (18.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 9 KYQKLKEQRD-KLERTVDKKAQLSLRNEENQFK 40
+Y K KE K+++ + A+ SL+N + Q+K
Sbjct: 297 QYIKAKENPSHKIKKF--RAAKKSLQNAQKQYK 327
>CGD|CAL0003745 [details] [associations]
symbol:SMC4 species:5476 "Candida albicans" [GO:0032116 "SMC
loading complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000939 "condensed chromosome inner kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000799
"nuclear condensin complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0003745
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:AACQ01000063
EMBL:AACQ01000062 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 RefSeq:XP_716802.1 RefSeq:XP_716862.1
ProteinModelPortal:Q5A4Y2 STRING:Q5A4Y2 GeneID:3641522
GeneID:3641578 KEGG:cal:CaO19.8579 KEGG:cal:CaO19.964
Uniprot:Q5A4Y2
Length = 1368
Score = 165 (63.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 60/246 (24%), Positives = 108/246 (43%)
Query: 11 QKLKEQRDKLERTV--DKKAQLSLRNEENQFKV-GAMVKA-PLKTLLFISMKKYLGSMSS 66
Q +++ +++L+ V D + +S +E Q K GA++ + + + ++ +
Sbjct: 1104 QAIEQNKEELDALVIRDVEPYISWLDETEQKKYNGALIDTLSEEDIADVDLEAVTSEIEE 1163
Query: 67 FSVKVGAMVKAPLRTLLFIS---MEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWL 123
+ A VK + L +E KKS + A+ D+ K+ L E +
Sbjct: 1164 LENYM-ANVKVDIEILKEYGAKIVEYNDKKSDLNQAVAERDSKKNYCDDLKRKRLDEFMV 1222
Query: 124 KVNT---DFGSIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFGGL-----WKESLGELSG 175
NT ++ ++ G A+L D LD + F + WK ++ LSG
Sbjct: 1223 GFNTISMTLKDMYRMITMGGNAELELV---DSLDPFSEGILFSVMPPKKSWK-NISNLSG 1278
Query: 176 GQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKE 235
G++ +KP PLY++DE+DAALD + + +K K +QFI++SL+
Sbjct: 1279 GEKTLSSLALVFALHKYKPTPLYVMDEIDAALDFRNVSIVANYIKERTKNAQFIVISLRN 1338
Query: 236 GMFSNA 241
MF A
Sbjct: 1339 NMFELA 1344
>UNIPROTKB|O93309 [details] [associations]
symbol:smc3 "Structural maintenance of chromosomes protein
3" species:8355 "Xenopus laevis" [GO:0000785 "chromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=ISS]
[GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000775 GO:GO:0051301 GO:GO:0007067 GO:GO:0006275
GO:GO:0006281 GO:GO:0000785 GO:GO:0051276 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039849 EMBL:BC094474 EMBL:AF051785
UniGene:Xl.290 UniGene:Xl.75355 ProteinModelPortal:O93309
IntAct:O93309 Uniprot:O93309
Length = 1209
Score = 132 (51.5 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 151 DILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALD 208
D G+ + V+F G E + +LSGGQ+ PAP Y+ DE+D ALD
Sbjct: 1083 DQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALD 1142
Query: 209 LSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
H + + M+ +QFI + + + +A+ + KF + S++
Sbjct: 1143 AQHRKAVSDMIMELASHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1190
Score = 77 (32.2 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 27/135 (20%), Positives = 65/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGHKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG +A L
Sbjct: 1041 SEVFQKLVPGGKATL 1055
Score = 48 (22.0 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 30/121 (24%), Positives = 58/121 (47%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFIS-MKKYLGS 63
E+ KL E K E + +K QL ++ + K+ + + + IS MK+
Sbjct: 231 ELNETRAKLDELSSKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKSKISAMKEEKEQ 290
Query: 64 MSSF-SVKVGAMVKAPLRTLLF---ISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALR 119
+SS ++ K L+T ++ + +K +++ +R KLL+ IEE ++K++A
Sbjct: 291 LSSERQEQIKQRTKLELKTKDLQDELAGNSEQRKRLLK-ERQKLLEKIEE--KQKELAET 347
Query: 120 E 120
E
Sbjct: 348 E 348
Score = 41 (19.5 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ +KY ++K ++D+L+
Sbjct: 450 ELDKKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQSLAAKREDLEKKQQLLRAATGKAIL 506
>DICTYBASE|DDB_G0286403 [details] [associations]
symbol:smc4 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0007076 "mitotic chromosome condensation" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000796 "condensin complex" evidence=ISS] [GO:0000070 "mitotic
sister chromatid segregation" evidence=ISS] [GO:0051301 "cell
division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0286403 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0046982 EMBL:AAFI02000085 GO:GO:0007076
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 HSSP:P32908 RefSeq:XP_637730.1
ProteinModelPortal:Q54LV0 STRING:Q54LV0 EnsemblProtists:DDB0219935
GeneID:8625595 KEGG:ddi:DDB_G0286403 OMA:QENFDEN Uniprot:Q54LV0
Length = 1415
Score = 164 (62.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 46/168 (27%), Positives = 77/168 (45%)
Query: 96 VESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKD-ILD 154
+E +R L K E L + + + + I+ ++ G A+L +D +
Sbjct: 1212 IEKERDNLSKRYESLRKNRLDEFMAGFTIITMKLKEIYQMITLGGDAELEIIDREDPFQE 1271
Query: 155 GLEVNVAFGGL-WKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQ 213
G+ +V WK ++ LSGG++ +KP LY++DE+DAALD +
Sbjct: 1272 GISFSVRPPKKSWK-NISNLSGGEKTLSSLALVFALHHYKPNALYVMDEIDAALDFKNVS 1330
Query: 214 NIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVN 261
I +K K +QFII+SL+ MF A+ + D N + T+N
Sbjct: 1331 IIANYIKERTKNAQFIIISLRNYMFELADRLVGIYKTD-NCTKSVTIN 1377
Score = 41 (19.5 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
E+ KY+ L+++ K ++ ++ LR +E + K
Sbjct: 1042 EILEKYKSLEKENLKATEAMEAVSE-QLREKEEETK 1076
Score = 40 (19.1 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 1 MNPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKV 41
+ P E+ +Y + EQ++ + + + Q+ ++EN +
Sbjct: 1150 LTPEEI-EQYMEATEQQNLIAKIHELTTQIQKISKENNVNI 1189
Score = 37 (18.1 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 8/37 (21%), Positives = 21/37 (56%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVG 42
V ++ L+++RD +DK+ +L + + +++G
Sbjct: 373 VEKEKDALQQERDNALEYIDKELKL-IHCKSIHYQIG 408
>UNIPROTKB|E2QRT5 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK
EMBL:AAEX03007228 EMBL:AAEX03007229 EMBL:AAEX03007230
RefSeq:XP_538328.2 Ensembl:ENSCAFT00000001296
Ensembl:ENSCAFT00000049571 GeneID:481207 KEGG:cfa:481207
NextBio:20856062 Uniprot:E2QRT5
Length = 1235
Score = 161 (61.7 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 56/221 (25%), Positives = 96/221 (43%)
Query: 31 SLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMVKAPLRTLLFISMEAM 90
SLR++ + ++A LK LL + + S +K A L L + +
Sbjct: 981 SLRDDLKALESDKEIEAHLKLLL-----QQVASQEDVLLKTAAPNLRALENLKTVRDKFQ 1035
Query: 91 TKKSIVESDRAKLLKVIEELDEKKKIA---LREAWLKVNTDFGSIFSLLLPG--SQAKLS 145
E+ + + +E ++ KK + + V+ I+ L +QA LS
Sbjct: 1036 ESTDAFEASKKEARMCRQEFEQVKKRRYDLFSQCFEHVSISIDEIYKKLCRNVSAQAFLS 1095
Query: 146 PPAGKD-ILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVD 204
P ++ L+G+ N G + LSGG++ F+PAP ++LDEVD
Sbjct: 1096 PENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVD 1155
Query: 205 AALDLSHTQNIGQMLKRHFKTS-QFIIVSLKEGMFSNANVI 244
AALD ++ + +K + Q II+SLKE +S A+ +
Sbjct: 1156 AALDNTNIGKVSSYIKEQTQEQFQMIIISLKEEFYSKADAL 1196
Score = 41 (19.5 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 3 PHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
P E T+ ++++ + + +KK +L E+ QF
Sbjct: 148 PKERTQFFEEISTSGELIGEYEEKKRKLQKAEEDAQF 184
Score = 40 (19.1 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 8/32 (25%), Positives = 20/32 (62%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEEN 37
+TR+ Q+ +++ LE +++K ++ +EN
Sbjct: 273 LTRQLQQTEKELKSLEALLNQKRPQYIKAKEN 304
>ASPGD|ASPL0000075987 [details] [associations]
symbol:AN4597 species:162425 "Emericella nidulans"
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006265 "DNA
topological change" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000939
"condensed chromosome inner kinetochore" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:BN001303
EMBL:AACD01000079 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 OrthoDB:EOG4WM82V
RefSeq:XP_662201.1 ProteinModelPortal:Q5B4D3 STRING:Q5B4D3
EnsemblFungi:CADANIAT00005839 GeneID:2872396 KEGG:ani:AN4597.2
Uniprot:Q5B4D3
Length = 1476
Score = 162 (62.1 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 66/249 (26%), Positives = 115/249 (46%)
Query: 11 QKLKEQRDKLERTVDKK-AQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSSFSV 69
QK + +K R +K ++L+L+N + +G + P + F K L M+ S+
Sbjct: 1182 QKALAENEKRSRYWQEKLSKLTLQNISD---LGED-QQPSEFQTFT--KDELAEMNKDSL 1235
Query: 70 K--VGAMVKAPLRTLLFISM-EAMTKKSIV-ESDRAKLLKVIEELDE-KKKI-ALREAWL 123
K + A+ + + + +S+ E +++ ES A L + D K ++ LR A L
Sbjct: 1236 KAAIAALEEKTQNSSIDLSVIEEYRRRAAEHESRSADLATALAARDSAKSRLDGLRSARL 1295
Query: 124 KVNTD-FGSI-------FSLLLPGSQAKLSPPAGKDILDGLEVNVAFGGL-----WKESL 170
+ FG I + ++ G A+L D LD + F + WK ++
Sbjct: 1296 NGFMEGFGIISLRLKEMYQMITMGGNAELELV---DSLDPFSEGILFSVMPPKKSWK-NI 1351
Query: 171 GELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFII 230
G LSGG++ +KP PLY++DE+DAALD + + +K K +QF++
Sbjct: 1352 GNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFRNVSIVASYIKERTKNAQFVV 1411
Query: 231 VSLKEGMFS 239
+SL+ M S
Sbjct: 1412 ISLRNNMLS 1420
>RGD|62006 [details] [associations]
symbol:Smc3 "structural maintenance of chromosomes 3"
species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=ISO;ISS] [GO:0000800 "lateral element" evidence=ISO]
[GO:0000922 "spindle pole" evidence=ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=ISO;ISS] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007067 "mitosis" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO;ISS] [GO:0007165 "signal transduction"
evidence=ISO;ISS] [GO:0016363 "nuclear matrix" evidence=ISO;ISS]
[GO:0019827 "stem cell maintenance" evidence=ISO] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0034991
"nuclear meiotic cohesin complex" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0045502 "dynein
binding" evidence=ISO;ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:62006 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0006275 GO:GO:0006281 GO:GO:0000785 GO:GO:0016363
GO:GO:0005604 GO:GO:0000922 GO:GO:0051276 GO:GO:0045502
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
HOVERGEN:HBG039849 EMBL:U82626 IPI:IPI00201289 UniGene:Rn.11074
ProteinModelPortal:P97690 STRING:P97690 PhosphoSite:P97690
PRIDE:P97690 UCSC:RGD:62006 ArrayExpress:P97690
Genevestigator:P97690 GermOnline:ENSRNOG00000014173 Uniprot:P97690
Length = 1191
Score = 125 (49.1 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 31/106 (29%), Positives = 51/106 (48%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1080 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1138
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNAN 242
Y+ DE+D ALD H + + M+ +QFI + + + +A+
Sbjct: 1139 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESAD 1184
Score = 78 (32.5 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 27/135 (20%), Positives = 66/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG++A L
Sbjct: 1041 SEVFQKLVPGAKATL 1055
Score = 47 (21.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>UNIPROTKB|P97690 [details] [associations]
symbol:Smc3 "Structural maintenance of chromosomes protein
3" species:10116 "Rattus norvegicus" [GO:0051276 "chromosome
organization" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 RGD:62006
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0051301 GO:GO:0007067 GO:GO:0007052 GO:GO:0006275
GO:GO:0006281 GO:GO:0000785 GO:GO:0016363 GO:GO:0005604
GO:GO:0000922 GO:GO:0051276 GO:GO:0045502 eggNOG:COG1196
SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
HOVERGEN:HBG039849 EMBL:U82626 IPI:IPI00201289 UniGene:Rn.11074
ProteinModelPortal:P97690 STRING:P97690 PhosphoSite:P97690
PRIDE:P97690 UCSC:RGD:62006 ArrayExpress:P97690
Genevestigator:P97690 GermOnline:ENSRNOG00000014173 Uniprot:P97690
Length = 1191
Score = 125 (49.1 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 31/106 (29%), Positives = 51/106 (48%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1080 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1138
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNAN 242
Y+ DE+D ALD H + + M+ +QFI + + + +A+
Sbjct: 1139 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESAD 1184
Score = 78 (32.5 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 27/135 (20%), Positives = 66/135 (48%)
Query: 19 KLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMV 75
+LE+ +++ L + EE K+ G++ + + +S+K+ + + ++
Sbjct: 921 ELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYS 980
Query: 76 KAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREAWLKVNTDF 129
+ L F++ +K I E DR +++++ L+ +K A++ + +V+ +F
Sbjct: 981 HVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNF 1040
Query: 130 GSIFSLLLPGSQAKL 144
+F L+PG++A L
Sbjct: 1041 SEVFQKLVPGAKATL 1055
Score = 47 (21.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 6.2e-09, Sum P(3) = 6.2e-09
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>ZFIN|ZDB-GENE-030131-3196 [details] [associations]
symbol:smc3 "structural maintenance of chromosomes
3" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-030131-3196 GO:GO:0005524 GO:GO:0005694 HSSP:P58301
GO:GO:0007064 SUPFAM:SSF75553 KO:K06669 CTD:9126 HOVERGEN:HBG039849
EMBL:BC044408 IPI:IPI00616384 RefSeq:NP_999854.1 UniGene:Dr.24937
ProteinModelPortal:Q803N2 STRING:Q803N2 PRIDE:Q803N2 GeneID:324475
KEGG:dre:324475 InParanoid:Q803N2 NextBio:20808789
ArrayExpress:Q803N2 Bgee:Q803N2 Uniprot:Q803N2
Length = 1216
Score = 128 (50.1 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 33/119 (27%), Positives = 56/119 (47%)
Query: 140 SQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAPL 197
S ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1080 SSSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPF 1138
Query: 198 YILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + M+ +QFI + + + +A+ + KF + S++
Sbjct: 1139 YLFDEIDQALDAQHRKAASDMIMELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1197
Score = 77 (32.2 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 31/163 (19%), Positives = 73/163 (44%)
Query: 11 QKLKEQRDKLERTVDKKAQLSLRNEENQFKV---GAMVKAPLKTLLFISMKKYLGSMSSF 67
+ + +LE+ +++ L + EE K+ G++ + + +++K+ +
Sbjct: 913 EAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLTLKQLFRKLEQC 972
Query: 68 SVKVGAMVKAPLRTL-LFISMEAMTKKSIV---ESDRA--KLLKVIEELDEKKKIALREA 121
+ ++ + L F++ +K I E DR +++++ L+ +K A++
Sbjct: 973 NTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNVLELRKYEAIQLT 1032
Query: 122 WLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFGG 164
+ +V+ +F +F L+PG +A L G D G + GG
Sbjct: 1033 FKQVSKNFSEVFQKLVPGGKATLVMKKG-DTEGGQSQDEGEGG 1074
Score = 57 (25.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 33/128 (25%), Positives = 54/128 (42%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSM 64
E+ KL E K E DK QL ++ + KV + + IS K
Sbjct: 231 ELNETRAKLDELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKSRISAMKE--EK 288
Query: 65 SSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIALR 119
S + +K RT L + + + + S++ K L K++E+++EK+K L+
Sbjct: 289 EQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-ELQ 345
Query: 120 EAWLKVNT 127
E K NT
Sbjct: 346 ETEPKFNT 353
Score = 50 (22.7 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 22/72 (30%), Positives = 36/72 (50%)
Query: 88 EAMTKKSIVESDRAK---LLKVIEEL-----DEKKKIALREAWLKVNTDFG-SIFSLLLP 138
E+++ E R K LLK IEE DEK+++A + W K+ +I++ L
Sbjct: 174 ESISLMKETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELN 233
Query: 139 GSQAKLSPPAGK 150
++AKL + K
Sbjct: 234 ETRAKLDELSSK 245
Score = 41 (19.5 bits), Expect = 7.2e-09, Sum P(3) = 7.2e-09
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ +KY ++K ++D+L+
Sbjct: 450 ELDKKYYEVKNRKDELQ 466
Score = 38 (18.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV + +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNRKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>SGD|S000004076 [details] [associations]
symbol:SMC4 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0007076 "mitotic chromosome
condensation" evidence=IMP;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IGI;IDA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0000799 "nuclear condensin complex" evidence=TAS;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0070058
"tRNA gene clustering" evidence=IMP] [GO:0032116 "SMC loading
complex" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
SGD:S000004076 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0003682 EMBL:BK006945
GO:GO:0016887 GO:GO:0006310 GO:GO:0007076 EMBL:U53880 GO:GO:0000799
GO:GO:0070058 EMBL:Z73259 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
HOGENOM:HOG000184777 OrthoDB:EOG4WM82V EMBL:Z73258 PIR:S64918
RefSeq:NP_013187.1 ProteinModelPortal:Q12267 SMR:Q12267
DIP:DIP-3007N IntAct:Q12267 MINT:MINT-436885 STRING:Q12267
PaxDb:Q12267 EnsemblFungi:YLR086W GeneID:850775 KEGG:sce:YLR086W
CYGD:YLR086w NextBio:966951 Genevestigator:Q12267
GermOnline:YLR086W Uniprot:Q12267
Length = 1418
Score = 157 (60.3 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 48/202 (23%), Positives = 88/202 (43%)
Query: 68 SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNT 127
+V +G + + R F + ++ + D K + + L +K+ + ++
Sbjct: 1219 NVDIGVLEEYARRLAEFKRRKLDLNNAVQKRDEVK--EQLGILKKKRFDEFMAGFNIISM 1276
Query: 128 DFGSIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFGGL-----WKESLGELSGGQRXXXX 182
++ ++ G A+L D LD V F + W+ ++ LSGG++
Sbjct: 1277 TLKEMYQMITMGGNAELELV---DSLDPFSEGVTFSVMPPKKSWR-NITNLSGGEKTLSS 1332
Query: 183 XXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNAN 242
+KP PLY++DE+DAALD + + +K K +QFI++SL+ MF A
Sbjct: 1333 LALVFALHKYKPTPLYVMDEIDAALDFRNVSIVANYIKERTKNAQFIVISLRNNMFELAQ 1392
Query: 243 VIFRTKFVDGNSNVTRTVNRKN 264
+ V N T++ KN
Sbjct: 1393 QLVG---VYKRDNRTKSTTIKN 1411
Score = 46 (21.3 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 8/33 (24%), Positives = 22/33 (66%)
Query: 5 EVTRKYQKLKEQRDKLERTVD--KKAQLSLRNE 35
E+ + ++LKEQ + +E +++ K ++ ++N+
Sbjct: 1060 ELKEQSEQLKEQMEDMEESINEFKSIEIEMKNK 1092
Score = 44 (20.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQL---SLRNE----ENQFKVGAM--VKAPL-KTLL 53
HE+ + +KL++ LE + K A++ SL +E E Q K M VKA K L
Sbjct: 873 HEMEEELKKLRDHEPDLESQISK-AEMEADSLASELTLAEQQVKEAEMAYVKAVSDKAQL 931
Query: 54 FISMK 58
+ MK
Sbjct: 932 NVVMK 936
>MGI|MGI:2154049 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=IDA]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IDA] [GO:0007126 "meiosis"
evidence=IPI] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030893 "meiotic cohesin complex" evidence=ISO;IDA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IDA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:2154049 GO:GO:0005524
GO:GO:0007126 GO:GO:0005654 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0034991
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK EMBL:AF303827
IPI:IPI00120490 RefSeq:NP_536718.1 UniGene:Mm.182737
ProteinModelPortal:Q920F6 SMR:Q920F6 STRING:Q920F6
PhosphoSite:Q920F6 PaxDb:Q920F6 PRIDE:Q920F6
Ensembl:ENSMUST00000023068 GeneID:140557 KEGG:mmu:140557
InParanoid:Q920F6 OrthoDB:EOG4RNB7M NextBio:369861 Bgee:Q920F6
CleanEx:MM_SMC1B Genevestigator:Q920F6
GermOnline:ENSMUSG00000022432 Uniprot:Q920F6
Length = 1248
Score = 160 (61.4 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 41/141 (29%), Positives = 69/141 (48%)
Query: 108 EELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDGLEVNVAFGG 164
E++ ++ A + + ++ I+ L + QA LSP ++ LDG+ N G
Sbjct: 1055 EQVKRRRYDAFSQCFEHISVSIDQIYKKLCRNNSAQAFLSPENPEEPYLDGISYNCVAPG 1114
Query: 165 LWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFK 224
+ LSGG++ F+PAP ++LDEVDAALD ++ + +K +
Sbjct: 1115 KRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQSQ 1174
Query: 225 TS-QFIIVSLKEGMFSNANVI 244
Q II+SLKE +S A+ +
Sbjct: 1175 EQFQMIIISLKEEFYSKADAL 1195
Score = 40 (19.1 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 6 VTRKYQKLKEQRDKLERTVD 25
+ ++ QK++E +DK++ D
Sbjct: 755 INKQQQKIEEFQDKIDEVED 774
Score = 36 (17.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 8 RKYQKLKEQRDKLERTVD 25
R + LK RDK + + D
Sbjct: 1021 RAQENLKTVRDKFQESAD 1038
Score = 36 (17.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 3 PHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
P E T+ ++++ + + KK +L E+ QF
Sbjct: 148 PKERTQFFEEISTSGEFIGEYEAKKKKLQKAEEDAQF 184
>RGD|1308791 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10116 "Rattus norvegicus" [GO:0000775 "chromosome,
centromeric region" evidence=IEA;ISO] [GO:0000795 "synaptonemal
complex" evidence=ISO] [GO:0000800 "lateral element"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=IEA;ISO] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030893 "meiotic cohesin complex"
evidence=ISO] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA;ISO] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:1308791 GO:GO:0005524 GO:GO:0007126 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0000800 EMBL:CH473950 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 KO:K06636 GeneTree:ENSGT00580000081569 CTD:27127
OMA:QLYHNEK OrthoDB:EOG4RNB7M IPI:IPI00372956 RefSeq:NP_001123970.1
UniGene:Rn.56972 Ensembl:ENSRNOT00000044883 GeneID:300121
KEGG:rno:300121 NextBio:646377 Uniprot:D3ZE73
Length = 1247
Score = 158 (60.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 41/141 (29%), Positives = 69/141 (48%)
Query: 108 EELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDGLEVNVAFGG 164
E++ ++ A + + ++ I+ L + QA LSP ++ LDG+ N G
Sbjct: 1055 EQVKRRRYDAFSQCFEHISVSIDQIYKKLCRNNSAQAFLSPENPEEPYLDGISYNCVAPG 1114
Query: 165 LWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFK 224
+ LSGG++ F+PAP ++LDEVDAALD ++ + +K +
Sbjct: 1115 KRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSGYIKEQSQ 1174
Query: 225 TS-QFIIVSLKEGMFSNANVI 244
Q II+SLKE +S A+ +
Sbjct: 1175 EQFQMIIISLKEEFYSRADAL 1195
Score = 42 (19.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 6 VTRKYQKLKEQRDKLERTVD 25
+ ++ QK++E +DK+++ D
Sbjct: 755 INKQQQKIEEFQDKIDKVED 774
Score = 36 (17.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 8 RKYQKLKEQRDKLERTVD 25
R + LK RDK + + D
Sbjct: 1021 RAQENLKAVRDKFQESAD 1038
Score = 36 (17.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEEN 37
+TR+ Q+ ++ +E +++K ++ +EN
Sbjct: 273 LTRQLQQTAKELKSVEAVLNQKRPQYIKAKEN 304
Score = 36 (17.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEEN 37
EV L +Q E T+ K A +LR +EN
Sbjct: 993 EVEAHLTLLLQQVASQENTLLKTAAPNLRAQEN 1025
Score = 36 (17.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 3 PHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
P E T+ ++++ + + KK +L E+ QF
Sbjct: 148 PKERTQFFEEISTSGEFIGEYEAKKKKLQKAEEDAQF 184
>ASPGD|ASPL0000036762 [details] [associations]
symbol:AN2963 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008278 "cohesin
complex" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET OrthoDB:EOG42VCQD
RefSeq:XP_660567.1 ProteinModelPortal:Q5B917 SMR:Q5B917
STRING:Q5B917 EnsemblFungi:CADANIAT00010118 GeneID:2874104
KEGG:ani:AN2963.2 Uniprot:Q5B917
Length = 1261
Score = 159 (61.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 50/181 (27%), Positives = 87/181 (48%)
Query: 91 TKKSIVES-DRAKLLKV-IEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPA 148
T+K ++ RA+ K EE+ ++ +A+ ++ G I+ L S L A
Sbjct: 1075 TEKDFEQARKRARKAKDDFEEVMRRRSELFNKAFSHISEQIGPIYRELTRSSNYPLGGQA 1134
Query: 149 GKDI-------LDGLEVNVAFGGLWK-ESLGELSGGQRXXXXXXXXXXXXXFKPAPLYIL 200
DI LDG++ + A L + + LSGG++ ++P+P ++L
Sbjct: 1135 YLDIEDSDEPYLDGIKYH-AMPPLKRFRDMEHLSGGEKTMAALALLFAIHSYQPSPFFVL 1193
Query: 201 DEVDAALDLSHTQNIGQMLKRHFKTS-QFIIVSLKEGMFSNANV---IFRTKFVDGNSNV 256
DEVDAALD ++ I + H QFI++SLK G+F N+ I+R + + + ++
Sbjct: 1194 DEVDAALDNTNVARIANYIYDHAAPGMQFIVISLKNGLFQNSEALVGIYRDQVENSSKSL 1253
Query: 257 T 257
T
Sbjct: 1254 T 1254
Score = 40 (19.1 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 7 TRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAM 44
+R +L ++ +L+ T D+ A L +++ + +G +
Sbjct: 848 SRIENQLSFEQQRLQATTDRIASLQAQHQRDANMIGEL 885
>UNIPROTKB|Q8NDV3 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes protein
1B" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IDA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 Reactome:REACT_115566 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 Reactome:REACT_111183 GO:GO:0006310
GO:GO:0030261 GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196
SUPFAM:SSF75553 EMBL:AL008718 EMBL:AL021391 GO:GO:0030893
HOVERGEN:HBG039593 KO:K06636 EMBL:AJ504806 EMBL:BC126208
EMBL:AK125736 IPI:IPI00479260 IPI:IPI00807400 IPI:IPI00893258
RefSeq:NP_683515.3 UniGene:Hs.334176 ProteinModelPortal:Q8NDV3
SMR:Q8NDV3 STRING:Q8NDV3 PhosphoSite:Q8NDV3 DMDM:57015410
PaxDb:Q8NDV3 PRIDE:Q8NDV3 Ensembl:ENST00000357450
Ensembl:ENST00000404354 GeneID:27127 KEGG:hsa:27127 UCSC:uc003bgc.3
UCSC:uc003bgd.3 CTD:27127 GeneCards:GC22M045739 H-InvDB:HIX0027884
HGNC:HGNC:11112 HPA:HPA001500 MIM:608685 neXtProt:NX_Q8NDV3
PharmGKB:PA35962 OMA:QLYHNEK GenomeRNAi:27127 NextBio:49836
Bgee:Q8NDV3 CleanEx:HS_SMC1B Genevestigator:Q8NDV3
GermOnline:ENSG00000077935 Uniprot:Q8NDV3
Length = 1235
Score = 158 (60.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 54/221 (24%), Positives = 98/221 (44%)
Query: 31 SLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMVKAPLRTLLFISMEAM 90
SL+ + + ++A L+ LL + + S +K A L L + +
Sbjct: 981 SLKEDLKALQSDQEIEAHLRLLL-----QQVASQEDILLKTAAPNLRALENLKTVRDKFQ 1035
Query: 91 TKKSIVESDR--AKLLKV-IEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLS 145
E+ R A+L + E++ +++ + + V+ I+ L + QA LS
Sbjct: 1036 ESTDAFEASRKEARLCRQEFEQVKKRRYDLFTQCFEHVSISIDQIYKKLCRNNSAQAFLS 1095
Query: 146 PPAGKD-ILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVD 204
P ++ L+G+ N G + LSGG++ F+PAP ++LDEVD
Sbjct: 1096 PENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVD 1155
Query: 205 AALDLSHTQNIGQMLKRHFKTS-QFIIVSLKEGMFSNANVI 244
AALD ++ + +K + Q I++SLKE +S A+ +
Sbjct: 1156 AALDNTNIGKVSSYIKEQTQDQFQMIVISLKEEFYSRADAL 1196
Score = 41 (19.5 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 3 PHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
P E T+ ++++ + + +KK +L E+ QF
Sbjct: 148 PKERTQFFEEISTSGELIGEYEEKKRKLQKAEEDAQF 184
Score = 37 (18.1 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 7/32 (21%), Positives = 20/32 (62%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEEN 37
+TR+ Q+ +++ +E +++K ++ +EN
Sbjct: 273 LTRQLQQTEKELKSVETLLNQKRPQYIKAKEN 304
>UNIPROTKB|G3X7C0 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042770 "signal transduction in response to DNA
damage" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0009314 "response to radiation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0000075
"cell cycle checkpoint" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000776 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:DAAA02073280
EMBL:DAAA02073281 Ensembl:ENSBTAT00000023619 Uniprot:G3X7C0
Length = 1232
Score = 142 (55.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 42/147 (28%), Positives = 69/147 (46%)
Query: 100 RAKLLK-VIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLSPPAGKD-ILDG 155
RAK K E++ +++ + V T+ I+ L S QA L P ++ LDG
Sbjct: 1051 RAKKAKQAFEQIKKERFDRFNACFESVATNIDEIYKALSRNSSAQAFLGPENPEEPYLDG 1110
Query: 156 LEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNI 215
+ N G + LSG ++ +KPAP ++LDE+DAALD ++ +
Sbjct: 1111 INYNCVAPGKRFRPMDNLSG-EKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKV 1169
Query: 216 GQMLKRHFKTS-QFIIVSLKEGMFSNA 241
+K + Q I++SLKE ++ A
Sbjct: 1170 ANYIKEQSTCNFQAIVISLKEEFYTKA 1196
Score = 59 (25.8 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 85 ISMEAMTKKSIVESDRAKLLKVIEELDEKKK 115
++ E +K +E D+ ++ KV +EL EKKK
Sbjct: 238 LNKELASKNKEIEKDKKRMDKVEDELKEKKK 268
Score = 43 (20.2 bits), Expect = 9.2e-07, Sum P(2) = 9.2e-07
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 8 RKYQKLKEQRDKLERTV---------DKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK 58
+KY +LKE+ K T+ D+KA + E + KV K K +
Sbjct: 373 KKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLREIEENQ 432
Query: 59 KYLGSMSSF--SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKK 114
K + + + + K + L L +E M K+ I E ++ +L +V+E+L + +
Sbjct: 433 KRIEKLEEYITTSKQSLEEQKKLEGELTEEVE-MAKRRIDEINK-ELNQVMEQLGDAR 488
Score = 42 (19.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFK 40
KLKE++++L T + K Q+ + +E + +
Sbjct: 673 KLKEKKERL--TEELKEQMKAKRKEAELR 699
Score = 42 (19.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 5 EVTRKYQKLKEQRDKLERTV--DKKAQLSLRNEENQFK 40
E+ QKL EQ+ L+R + KA L + ++F+
Sbjct: 1002 EMNTLQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQ 1039
Score = 38 (18.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 11 QKLKEQRDKLERTVDK 26
+KL+ RDK + T D+
Sbjct: 1029 EKLESVRDKFQETSDE 1044
>FB|FBgn0040283 [details] [associations]
symbol:SMC1 "SMC1" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0008278 "cohesin
complex" evidence=ISS;IDA;NAS] [GO:0007062 "sister chromatid
cohesion" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IGI] [GO:0005694 "chromosome" evidence=IDA] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0016319 "mushroom body
development" evidence=IMP] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0035327 "transcriptionally active chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005700
"polytene chromosome" evidence=IDA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0006281 GO:GO:0016322 GO:GO:0048813 GO:GO:0006310
GO:GO:0016319 GO:GO:0010629 GO:GO:0030261 GO:GO:0005700
GO:GO:0035327 GO:GO:0008278 GO:GO:0007062 SUPFAM:SSF75553
HSSP:Q9X0R4 EMBL:AF225909 EMBL:AJ271845 STRING:Q9N6I4
FlyBase:FBgn0040283 InParanoid:Q9N6I4 OrthoDB:EOG4QNKB0
Uniprot:Q9N6I4
Length = 1238
Score = 156 (60.0 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 32/106 (30%), Positives = 55/106 (51%)
Query: 140 SQAKLSPPAGKD-ILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLY 198
+QA + P ++ LDG+ N G + + LSGG++ F PAP +
Sbjct: 1107 AQAYIGPDNPEEPYLDGINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTHSFHPAPFF 1166
Query: 199 ILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVI 244
+LDE+DAALD ++ + ++ H Q I++SLKE + +A+ +
Sbjct: 1167 VLDEIDAALDNTNIGKVASYIRDHTTNLQTIVISLKEEFYGHADAL 1212
Score = 39 (18.8 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 91 TKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPG 139
+K+ I E R +L V ++L + K +A K + +F +PG
Sbjct: 489 SKEKIAEKQR-ELEDVRDQLGDAKSDKHEDARRKKKQEVVELFKKQVPG 536
Score = 37 (18.1 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEE 36
++TR K+ ++ + E ++K+ L ++ +E
Sbjct: 295 KITRDLAKIDQEIREFETQMNKRRPLYIKAKE 326
Score = 37 (18.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
H K QK + Q + E + Q L E+Q K
Sbjct: 696 HMAQLKMQKERLQEELKELVKKSRKQSELATVESQIK 732
>UNIPROTKB|F1N6C8 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:DAAA02014929
EMBL:DAAA02014930 IPI:IPI00697785 ProteinModelPortal:F1N6C8
PRIDE:F1N6C8 Ensembl:ENSBTAT00000014005 Uniprot:F1N6C8
Length = 1235
Score = 156 (60.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 53/221 (23%), Positives = 98/221 (44%)
Query: 31 SLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSSFSVKVGAMVKAPLRTLLFISMEAM 90
SLR + + ++A L+ LL + + S +K A + L + +
Sbjct: 987 SLREDLKALQSDKEIEAQLRLLL-----QQVASQEDILLKTAAPNLRAVENLKTVRDKFQ 1041
Query: 91 TKKSIVESDR--AKLLKV-IEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAKLS 145
E+ R A++ + E++ +++ + + ++ I+ L + QA LS
Sbjct: 1042 ESIDAFEASRKEARICRQEFEQVKKRRYDLFNQCFEHISISIDQIYKKLCRNNSAQAFLS 1101
Query: 146 PPAGKD-ILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVD 204
P ++ L+G+ N G + LSGG++ F+PAP ++LDEVD
Sbjct: 1102 PENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVD 1161
Query: 205 AALDLSHTQNIGQMLKRHFKTS-QFIIVSLKEGMFSNANVI 244
AALD ++ + +K + Q II+SLKE +S A+ +
Sbjct: 1162 AALDNTNIGKVSSYIKEQTQEQFQMIIISLKEEFYSKADAL 1202
Score = 40 (19.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 3 PHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
P E T+ ++++ + + +KK +L E+ QF
Sbjct: 148 PKERTQFFEEISTSGELIGEYEEKKRKLHKAEEDAQF 184
Score = 36 (17.7 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 7/32 (21%), Positives = 20/32 (62%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEEN 37
++R+ Q+ +++ LE +++K ++ +EN
Sbjct: 273 LSRQLQQTQKELKSLEALLNQKRPQYIKAKEN 304
>TIGR_CMR|GSU_1130 [details] [associations]
symbol:GSU_1130 "chromosome segregation SMC protein,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 TIGRFAMs:TIGR02168 HSSP:Q9X0R4
EMBL:AJ543647 ProteinModelPortal:Q84EX7 PATRIC:22025022
ProtClustDB:CLSK924468 Uniprot:Q84EX7
Length = 1175
Score = 156 (60.0 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 40/156 (25%), Positives = 75/156 (48%)
Query: 91 TKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGK 150
++K +E L + I+ ++ + E + VN F +F L G +A+L +
Sbjct: 1002 SQKDDLEESLQSLQQAIQRINRTTRKRFLETFTLVNEKFQEVFPRLFCGGRAELRLTNEE 1061
Query: 151 DILD-GLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDL 209
D+L+ G+++ V G +++ LSGG++ KP P +LDEVDA LD
Sbjct: 1062 DLLETGIDIIVQPPGKKLQNVTLLSGGEKALTAVALIFSIFLIKPTPFCLLDEVDAPLDD 1121
Query: 210 SHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIF 245
++ M++ SQFII++ + + A+ ++
Sbjct: 1122 ANIGRFNDMVREMSDVSQFIIITHNKATMAVADTLY 1157
Score = 39 (18.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 7 TRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
TR+ ++L+ +R +LE V Q+ L E QF
Sbjct: 693 TRR-EELRGERSRLEEEVRDLRQI-LHQTEIQF 723
Score = 39 (18.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 12 KLKEQRDKLERTVDKKAQL-SLRNEENQFKVGAMVK 46
++K Q + L+R V K + R E + ++ A V+
Sbjct: 200 EIKRQLNSLQRQVKKAERFREYREELREIEIHASVR 235
>MGI|MGI:1917349 [details] [associations]
symbol:Smc4 "structural maintenance of chromosomes 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000796 "condensin complex" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=ISO] [GO:0010032
"meiotic chromosome condensation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IMP]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 MGI:MGI:1917349
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0006310 GO:GO:0046982
GO:GO:0045132 GO:GO:0007076 GO:GO:0051383 GO:GO:0000796
GO:GO:0010032 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 PDB:3L51
PDBsum:3L51 OMA:IAIEFLT CTD:10051 HOGENOM:HOG000184777
HOVERGEN:HBG106696 OrthoDB:EOG4PZJ5V EMBL:AJ534940 EMBL:BC005507
EMBL:BC062939 EMBL:AK088350 EMBL:AK088846 IPI:IPI00229397
RefSeq:NP_598547.1 UniGene:Mm.206841 ProteinModelPortal:Q8CG47
SMR:Q8CG47 STRING:Q8CG47 PhosphoSite:Q8CG47 PaxDb:Q8CG47
PRIDE:Q8CG47 Ensembl:ENSMUST00000042901 GeneID:70099 KEGG:mmu:70099
UCSC:uc008pma.1 InParanoid:Q8CG47 ChiTaRS:SMC4
EvolutionaryTrace:Q8CG47 NextBio:330998 Bgee:Q8CG47 CleanEx:MM_SMC4
Genevestigator:Q8CG47 GermOnline:ENSMUSG00000034349 Uniprot:Q8CG47
Length = 1286
Score = 155 (59.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 49/198 (24%), Positives = 86/198 (43%)
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFG 130
+GA+ + + L++ A K + S+R + E+L +++ + +
Sbjct: 1088 LGAIAEYKKKEDLYLQRVAELDK--ITSERDNFRQAYEDLRKQRLNEFMAGFYVITNKLK 1145
Query: 131 SIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFG-----GLWKESLGELSGGQRXXXXXXX 185
+ +L G A+L D LD + F WK+ + LSGG++
Sbjct: 1146 ENYQMLTLGGDAELELV---DSLDPFSEGIMFSVRPPKKSWKK-IFNLSGGEKTLSSLAL 1201
Query: 186 XXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIF 245
+KP PLY +DE+DAALD + + + K +QFII+SL+ MF ++ +
Sbjct: 1202 VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLI 1261
Query: 246 RTKFVDGNSNVTRTVNRK 263
+ NS + VN K
Sbjct: 1262 GI-YKTYNSTKSVAVNPK 1278
>WB|WBGene00004873 [details] [associations]
symbol:smc-3 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040002 "collagen and cuticulin-based cuticle
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0007109 "cytokinesis, completion of separation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0008278 "cohesin complex" evidence=IDA;IPI]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=NAS] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040010 GO:GO:0007059 GO:GO:0005819
GO:GO:0004674 GO:GO:0040011 GO:GO:0000790 GO:GO:0040035
GO:GO:0000794 GO:GO:0030261 GO:GO:0007109 GO:GO:0040002
GO:GO:0008278 EMBL:AL117202 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
GeneTree:ENSGT00580000081628 RefSeq:NP_001129842.1
ProteinModelPortal:B2FDA8 SMR:B2FDA8 STRING:B2FDA8 PaxDb:B2FDA8
EnsemblMetazoa:Y47D3A.26b.1 EnsemblMetazoa:Y47D3A.26b.2
GeneID:176559 KEGG:cel:CELE_Y47D3A.26 CTD:176559
WormBase:Y47D3A.26b InParanoid:B2FDA8 NextBio:893080
ArrayExpress:B2FDA8 Uniprot:B2FDA8
Length = 1261
Score = 155 (59.6 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 49/190 (25%), Positives = 89/190 (46%)
Query: 89 AMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPA 148
A KKS E +LLKV+E +K A+ + +V +F +F L+P + K+ A
Sbjct: 1065 AEQKKS--EDSIEELLKVLEN---RKYEAIDLTFKQVKKNFEQVFKQLVPHGRGKMQMRA 1119
Query: 149 GK-----------DILDGLEVNVAF----GGLWKESLGELSGGQRXXXXXXXXXXXXXFK 193
+ ++ +G+ V V+F G + +LSGGQ+
Sbjct: 1120 REQRDDEEGINSVELYEGISVLVSFVSDDGDSETREMTQLSGGQKSLVALAIIFSIQKCD 1179
Query: 194 PAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGN 253
PAP Y+ DE+DAALD H +++ M++ +QF+ + + + + A + +F +
Sbjct: 1180 PAPFYLFDEIDAALDAQHRKSVADMIQSLSDQAQFVTTTFRPELLATAEKFYGVRFRNKV 1239
Query: 254 SNVTRTVNRK 263
S++ +V R+
Sbjct: 1240 SHID-SVTRE 1248
Score = 40 (19.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 5 EVTRKYQKLKEQRDKLERTVDK 26
+V R+ +KL + + RT+D+
Sbjct: 423 DVEREDEKLNNEIQSISRTIDE 444
Score = 38 (18.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 2 NPHEVTRKYQKLKEQRDKLERTV 24
N E ++YQKL + + +E T+
Sbjct: 206 NEKEDLKEYQKLDKTKRSVEYTM 228
>POMBASE|SPBC29A10.04 [details] [associations]
symbol:psm1 "mitotic cohesin complex subunit Psm1"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] [GO:0008278 "cohesin complex"
evidence=IDA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030892 "mitotic cohesin complex" evidence=NAS] [GO:0046982
"protein heterodimerization activity" evidence=IPI]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
PomBase:SPBC29A10.04 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0006310 GO:GO:0030261 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 GO:GO:0030892 HOGENOM:HOG000195481 PIR:T40059
RefSeq:NP_596049.2 IntAct:O94383 STRING:O94383 PRIDE:O94383
GeneID:2540557 OrthoDB:EOG42VCQD NextBio:20801683 Uniprot:O94383
Length = 1228
Score = 146 (56.5 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 27/93 (29%), Positives = 53/93 (56%)
Query: 170 LGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTS-QF 228
+ +LSGG++ ++P+P ++LDE+DAALD ++ I +++H + QF
Sbjct: 1129 MDQLSGGEKTMAALALLFAIHSYQPSPFFVLDEIDAALDQTNVTKIANYIRQHASSGFQF 1188
Query: 229 IIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVN 261
+++SLK +FS + + + D N +RT++
Sbjct: 1189 VVISLKNQLFSKSEALVGI-YRDQQENSSRTLS 1220
Score = 51 (23.0 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 36/164 (21%), Positives = 68/164 (41%)
Query: 9 KYQKLKEQRD--KLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMK-KYLGSMS 65
+YQ KE+RD +L + K L N +V +KA ++ I + + +
Sbjct: 218 RYQSQKEKRDSAQLVYLLWKLFHLEKSISSNMAEV-TRLKAD--SIQLIERRDENTKEIE 274
Query: 66 SFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEE-LDEKKKIA-LREAWL 123
K G++ R LL + ++ ++ S R +L+ + E+ L+ K + ++
Sbjct: 275 KLKEKEGSI----RRNLLAFDRKVRKQEKLIASKRPELISIAEKALESKSNLRKIQRKAA 330
Query: 124 KVNTDFGSIFSLL--LPGSQAKLSPPAGKDILDGLEVNVAFGGL 165
++ D+ S L L LS A K+ L ++ GL
Sbjct: 331 EIEKDYSDQASTLQVLENQLTSLSA-AEKEFLKDMQEKEQLKGL 373
Score = 46 (21.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 34/158 (21%), Positives = 67/158 (42%)
Query: 5 EVTRKYQKLKEQRDKLERTV---DKKA--QLSLRNEENQFKVGAMVKA-PLKTLLFISMK 58
E T++ +KLKE+ + R + D+K Q L + + KA K+ L +
Sbjct: 268 ENTKEIEKLKEKEGSIRRNLLAFDRKVRKQEKLIASKRPELISIAEKALESKSNLRKIQR 327
Query: 59 KYLGSMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIAL 118
K +S + + + + E K + E ++ K L+++ E D+++ L
Sbjct: 328 KAAEIEKDYSDQASTLQVLENQLTSLSAAEKEFLKDMQEKEQLKGLRLLPE-DKEEYEGL 386
Query: 119 REAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDGL 156
R K+N++ +F L K++ + KD L +
Sbjct: 387 RSEADKLNSNL--LFKLQTLNRNIKVTSQS-KDSLTSI 421
Score = 44 (20.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 30/129 (23%), Positives = 56/129 (43%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTL---LFISMKKYL 61
E +Y+ L+ + DKL + K Q RN KV + K L ++ L +K
Sbjct: 378 EDKEEYEGLRSEADKLNSNLLFKLQTLNRN----IKVTSQSKDSLTSIVGDLESKIKSLH 433
Query: 62 GSMSSFSVKVGAMVKAPLRTLLFISMEA--MTKKSIVESDRAKLLKVIEELDEKKKIALR 119
S+SS + ++ + + +E KK + S+ L +EL+E+ + L+
Sbjct: 434 ESVSSLDTERADLLAKINEKIESLELEKHDQQKKRLTYSE---LFHKTQELNEELQSCLQ 490
Query: 120 EAWLKVNTD 128
+ L+ + D
Sbjct: 491 KI-LEASAD 498
>UNIPROTKB|F6V533 [details] [associations]
symbol:SMC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AAEX03007228
EMBL:AAEX03007229 EMBL:AAEX03007230 Ensembl:ENSCAFT00000001296
Uniprot:F6V533
Length = 1079
Score = 152 (58.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 40/141 (28%), Positives = 69/141 (48%)
Query: 108 EELDEKKKIALREAWLKVNTDFGSIFSLLLPG--SQAKLSPPAGKD-ILDGLEVNVAFGG 164
E++ +++ + + V+ I+ L +QA LSP ++ L+G+ N G
Sbjct: 895 EQVKKRRYDLFSQCFEHVSISIDEIYKKLCRNVSAQAFLSPENPEEPYLEGISYNCVAPG 954
Query: 165 LWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFK 224
+ LSGG++ F+PAP ++LDEVDAALD ++ + +K +
Sbjct: 955 KRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQ 1014
Query: 225 TS-QFIIVSLKEGMFSNANVI 244
Q II+SLKE +S A+ +
Sbjct: 1015 EQFQMIIISLKEEFYSKADAL 1035
Score = 42 (19.8 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 29/118 (24%), Positives = 49/118 (41%)
Query: 8 RKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSSF 67
+K L + + + R + + SL EN K L T +K L S+ +
Sbjct: 233 KKIHFLNTELEHVSRNLSVTKE-SLSRHENTVKAKKKEHGML-TRQLQQTEKELKSLEAL 290
Query: 68 -SVKVGAMVKAPLRTLLFISMEAMTKKSIVESDR--AKLLKVIEELDEKKKIALREAW 122
+ K +KA T + + KKSI +S++ +K I+ L E + + L AW
Sbjct: 291 LNQKRPQYIKAKENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKAL-ETELVDLDGAW 347
Score = 41 (19.5 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 3 PHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF 39
P E T+ ++++ + + +KK +L E+ QF
Sbjct: 148 PKERTQFFEEISTSGELIGEYEEKKRKLQKAEEDAQF 184
Score = 40 (19.1 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 8/32 (25%), Positives = 20/32 (62%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEEN 37
+TR+ Q+ +++ LE +++K ++ +EN
Sbjct: 273 LTRQLQQTEKELKSLEALLNQKRPQYIKAKEN 304
>UNIPROTKB|Q9ERA5 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:47230 "Microtus arvalis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 SUPFAM:SSF75553
HOVERGEN:HBG106696 EMBL:AJ299713 EMBL:AJ299717
ProteinModelPortal:Q9ERA5 Uniprot:Q9ERA5
Length = 1243
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 48/195 (24%), Positives = 86/195 (44%)
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFG 130
+GA+ + + L++ A K + S+R + E+L +++ + +
Sbjct: 1045 LGAIAEYKKKEELYLQRVAELDK--ITSERDNFRQAYEDLRKQRLNEFMAGFYIITNKLK 1102
Query: 131 SIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFG-----GLWKESLGELSGGQRXXXXXXX 185
+ +L G A+L D LD + F WK+ + LSGG++
Sbjct: 1103 ENYQMLTLGGDAELELV---DSLDPFSEGIMFSVRPPKKSWKK-IFNLSGGEKTLSSLAL 1158
Query: 186 XXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIF 245
+KP PLY +DE+DAALD + + + K +QFII+SL+ MF ++
Sbjct: 1159 VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD--- 1215
Query: 246 RTKFVDGNSNVTRTV 260
R + N+T++V
Sbjct: 1216 RLIGIYKTYNITKSV 1230
>WB|WBGene00001086 [details] [associations]
symbol:dpy-27 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IMP]
[GO:0042464 "dosage compensation by hypoactivation of X chromosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0000228
"nuclear chromosome" evidence=IDA] [GO:0000805 "X chromosome"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046536 "dosage compensation complex"
evidence=IPI] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0043565 GO:GO:0006281
GO:GO:0016358 GO:GO:0010171 GO:GO:0040011 GO:GO:0006310
GO:GO:0030261 EMBL:Z35602 GO:GO:0000228 GO:GO:0000805 GO:GO:0042464
GO:GO:0007062 EMBL:L35274 PIR:T24216 RefSeq:NP_497771.1
ProteinModelPortal:P48996 SMR:P48996 IntAct:P48996 STRING:P48996
PaxDb:P48996 PRIDE:P48996 EnsemblMetazoa:R13G10.1 GeneID:175492
KEGG:cel:CELE_R13G10.1 UCSC:R13G10.1 CTD:175492 WormBase:R13G10.1
eggNOG:COG1196 GeneTree:ENSGT00580000081617 HOGENOM:HOG000021811
InParanoid:P48996 KO:K06675 OMA:FHKNLTM NextBio:888386
GO:GO:0046536 SUPFAM:SSF75553 Uniprot:P48996
Length = 1469
Score = 159 (61.0 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 50/165 (30%), Positives = 79/165 (47%)
Query: 98 SDRAKLLKV-IEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLS-PPAGK--DIL 153
SD+ K + + EL + EA + T ++ L+ G A L GK D
Sbjct: 1165 SDKLKAHREKLNELRMARFNEFSEALAFLGTTTQMLYQLITNGGDASLKFVEEGKSTDPF 1224
Query: 154 DG-LEVNVAFGGL-WKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSH 211
DG ++ +V WK + LSGG++ ++P PLY++DE+DAALDL++
Sbjct: 1225 DGGIKFSVRPAKKSWK-LIENLSGGEKTLASLCFVFAMHHYRPTPLYVMDEIDAALDLNN 1283
Query: 212 TQNIGQMLKRHFKT--SQFIIVSLKEGMFSNANVIFRTKFVDGNS 254
I +K +T +QFII+SL+ MF N + +DG +
Sbjct: 1284 VSLIANYIKHSERTRNAQFIIISLRNQMFEVGNRLLGIYKIDGKT 1328
Score = 36 (17.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKK 27
+ K KL++ DK R D K
Sbjct: 1120 DTANKICKLEKDVDKFRREFDNK 1142
Score = 36 (17.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 8/34 (23%), Positives = 21/34 (61%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKK-AQLSLRNEEN 37
E + K+K+Q ++ +R +D+ +L +N+++
Sbjct: 884 ESQKSSAKIKQQIEQYKRKMDRMFMELVQKNKDS 917
>UNIPROTKB|P48996 [details] [associations]
symbol:dpy-27 "Chromosome condensation protein dpy-27"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0043565 GO:GO:0006281
GO:GO:0016358 GO:GO:0010171 GO:GO:0040011 GO:GO:0006310
GO:GO:0030261 EMBL:Z35602 GO:GO:0000228 GO:GO:0000805 GO:GO:0042464
GO:GO:0007062 EMBL:L35274 PIR:T24216 RefSeq:NP_497771.1
ProteinModelPortal:P48996 SMR:P48996 IntAct:P48996 STRING:P48996
PaxDb:P48996 PRIDE:P48996 EnsemblMetazoa:R13G10.1 GeneID:175492
KEGG:cel:CELE_R13G10.1 UCSC:R13G10.1 CTD:175492 WormBase:R13G10.1
eggNOG:COG1196 GeneTree:ENSGT00580000081617 HOGENOM:HOG000021811
InParanoid:P48996 KO:K06675 OMA:FHKNLTM NextBio:888386
GO:GO:0046536 SUPFAM:SSF75553 Uniprot:P48996
Length = 1469
Score = 159 (61.0 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 50/165 (30%), Positives = 79/165 (47%)
Query: 98 SDRAKLLKV-IEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLS-PPAGK--DIL 153
SD+ K + + EL + EA + T ++ L+ G A L GK D
Sbjct: 1165 SDKLKAHREKLNELRMARFNEFSEALAFLGTTTQMLYQLITNGGDASLKFVEEGKSTDPF 1224
Query: 154 DG-LEVNVAFGGL-WKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSH 211
DG ++ +V WK + LSGG++ ++P PLY++DE+DAALDL++
Sbjct: 1225 DGGIKFSVRPAKKSWK-LIENLSGGEKTLASLCFVFAMHHYRPTPLYVMDEIDAALDLNN 1283
Query: 212 TQNIGQMLKRHFKT--SQFIIVSLKEGMFSNANVIFRTKFVDGNS 254
I +K +T +QFII+SL+ MF N + +DG +
Sbjct: 1284 VSLIANYIKHSERTRNAQFIIISLRNQMFEVGNRLLGIYKIDGKT 1328
Score = 36 (17.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKK 27
+ K KL++ DK R D K
Sbjct: 1120 DTANKICKLEKDVDKFRREFDNK 1142
Score = 36 (17.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 8/34 (23%), Positives = 21/34 (61%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKK-AQLSLRNEEN 37
E + K+K+Q ++ +R +D+ +L +N+++
Sbjct: 884 ESQKSSAKIKQQIEQYKRKMDRMFMELVQKNKDS 917
>UNIPROTKB|Q81ZL2 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K03529 TIGRFAMs:TIGR02168 EMBL:AJ543641 RefSeq:NP_819572.1
HSSP:Q9X0R4 ProteinModelPortal:Q81ZL2 PRIDE:Q81ZL2 GeneID:1208425
KEGG:cbu:CBU_0540 PATRIC:17929777 HOGENOM:HOG000036391 OMA:WARISKL
ProtClustDB:CLSK914134 BioCyc:CBUR227377:GJ7S-543-MONOMER
Uniprot:Q81ZL2
Length = 1169
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 59/235 (25%), Positives = 106/235 (45%)
Query: 4 HEVTRKYQKLKEQRDKLE-RTVDKKAQLSLRNEENQFKVG-AMVKAPLKTLLFISMKKYL 61
+E + ++L+ QR + R K QLS EN F + M + P + + S ++ L
Sbjct: 902 NEAQAQLEELRMQRQTVSVRQTTIKEQLS----ENDFDLEQVMAELPEEATIE-SWQEKL 956
Query: 62 GSMSSFSVKVGAMVKAPLRTLLFISMEA--MTKKSIVESDRAKLLK-VIEELDEKKKIAL 118
+ ++G + A + ++ + K+ ++ ++LK I ++D + +
Sbjct: 957 DQLVERIQRMGPINLAAIEEYESVNERKNYLDKQHADLTEALEILKNAIHKIDRETRAKF 1016
Query: 119 REAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILD-GLEVNVAFGGLWKESLGELSGGQ 177
+E + +VN F S+F + G +A L D+L G+ V G ++ LSGG+
Sbjct: 1017 QETYDQVNQQFQSLFPRIFGGGRATLEM-TDTDLLTAGVIVRAQPPGKRNVTIHMLSGGE 1075
Query: 178 RXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVS 232
+ PAP ILDEVDA LD + Q++K K QF+++S
Sbjct: 1076 KALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGRFCQLVKEMSKEVQFLVIS 1130
>TIGR_CMR|CBU_0540 [details] [associations]
symbol:CBU_0540 "SMC family protein" species:227377
"Coxiella burnetii RSA 493" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K03529 TIGRFAMs:TIGR02168 EMBL:AJ543641 RefSeq:NP_819572.1
HSSP:Q9X0R4 ProteinModelPortal:Q81ZL2 PRIDE:Q81ZL2 GeneID:1208425
KEGG:cbu:CBU_0540 PATRIC:17929777 HOGENOM:HOG000036391 OMA:WARISKL
ProtClustDB:CLSK914134 BioCyc:CBUR227377:GJ7S-543-MONOMER
Uniprot:Q81ZL2
Length = 1169
Score = 153 (58.9 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 59/235 (25%), Positives = 106/235 (45%)
Query: 4 HEVTRKYQKLKEQRDKLE-RTVDKKAQLSLRNEENQFKVG-AMVKAPLKTLLFISMKKYL 61
+E + ++L+ QR + R K QLS EN F + M + P + + S ++ L
Sbjct: 902 NEAQAQLEELRMQRQTVSVRQTTIKEQLS----ENDFDLEQVMAELPEEATIE-SWQEKL 956
Query: 62 GSMSSFSVKVGAMVKAPLRTLLFISMEA--MTKKSIVESDRAKLLK-VIEELDEKKKIAL 118
+ ++G + A + ++ + K+ ++ ++LK I ++D + +
Sbjct: 957 DQLVERIQRMGPINLAAIEEYESVNERKNYLDKQHADLTEALEILKNAIHKIDRETRAKF 1016
Query: 119 REAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILD-GLEVNVAFGGLWKESLGELSGGQ 177
+E + +VN F S+F + G +A L D+L G+ V G ++ LSGG+
Sbjct: 1017 QETYDQVNQQFQSLFPRIFGGGRATLEM-TDTDLLTAGVIVRAQPPGKRNVTIHMLSGGE 1075
Query: 178 RXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVS 232
+ PAP ILDEVDA LD + Q++K K QF+++S
Sbjct: 1076 KALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGRFCQLVKEMSKEVQFLVIS 1130
>FB|FBgn0015615 [details] [associations]
symbol:Cap "Chromosome-associated protein" species:7227
"Drosophila melanogaster" [GO:0008278 "cohesin complex"
evidence=ISS;NAS] [GO:0007062 "sister chromatid cohesion"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0001737 "establishment of imaginal
disc-derived wing hair orientation" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0022008 GO:GO:0046331
GO:GO:0051276 GO:GO:0001737 GO:GO:0008278 eggNOG:COG1196
SUPFAM:SSF75553 HSSP:Q9X0R4 EMBL:U30492 PIR:S70553
ProteinModelPortal:Q24098 SMR:Q24098 STRING:Q24098 PaxDb:Q24098
PRIDE:Q24098 FlyBase:FBgn0015615 InParanoid:Q24098
OrthoDB:EOG4KKWHV ArrayExpress:Q24098 Bgee:Q24098 Uniprot:Q24098
Length = 1231
Score = 154 (59.3 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 45/180 (25%), Positives = 83/180 (46%)
Query: 92 KKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLP-GSQ---AKLSPP 147
+K ++ K+ +I+ L+ +K A++ + +V +F +F L+P G+ K
Sbjct: 1033 RKEELDIGDQKIHMLIQSLEMQKVEAIQFTFRQVAQNFTKVFKKLVPMGAGFLILKTKDN 1092
Query: 148 AG---------KDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
G D G+ + V+F G+ E + +LSGGQ+ PAP
Sbjct: 1093 EGDEMEKEVENSDAFTGIGIRVSFTGVEAEMREMNQLSGGQKSLVALALIFSIQKCDPAP 1152
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ T+QFI + + + NA+ + +F + S++
Sbjct: 1153 FYLFDEIDQALDAMHRKAVANMIHELSDTAQFITTTFRPELLENAHKFYGVRFRNKVSHI 1212
Score = 40 (19.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 30/116 (25%), Positives = 47/116 (40%)
Query: 7 TRKYQKLKEQRDKLERTVDKKAQ-LS--LRNEENQFKVGAMVKAPLKTLLFISMKKYLGS 63
TR Y + KE+ L R D K + +S L+ E++ + K LK +
Sbjct: 196 TRVYDERKEESLNLLRETDSKVEKISEYLKTIEDRLQTLEEEKEELKEYQKWDKTRRTLE 255
Query: 64 MSSFSVKVGAMVKAPLRTLLFISMEAMTKKSI--VESDRA--KLLKVIEELDEKKK 115
+ ++ KA L L + KK I +E +A K+ V + L E KK
Sbjct: 256 YIRYETELKDTKKA-LDELQLQRKSSSDKKKIYNIEIQKAQEKIKDVQKNLKEAKK 310
Score = 37 (18.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 5 EVTRKYQK-LKEQRDKLERTVDKKAQLSLRNEE 36
E + QK LKE + K++ T ++++ L ++
Sbjct: 296 EKIKDVQKNLKEAKKKVQSTKEERSVLMTEQQQ 328
Score = 36 (17.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQ 29
+V KY+ +K + + R + K Q
Sbjct: 377 DVKPKYEAMKRKEEDCSRELQLKEQ 401
Score = 36 (17.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 2 NPHEVTRKYQKLKEQRDKL----ERTVDKKAQLSL 32
N E +K Q KE+R L ++ + +K +L L
Sbjct: 304 NLKEAKKKVQSTKEERSVLMTEQQQLLREKTKLDL 338
>UNIPROTKB|F1SH51 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:CU466375 RefSeq:XP_001927540.1 UniGene:Ssc.7850
Ensembl:ENSSSCT00000012842 GeneID:100152361 KEGG:ssc:100152361
Uniprot:F1SH51
Length = 1288
Score = 155 (59.6 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 48/192 (25%), Positives = 87/192 (45%)
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFG 130
+GA+V+ + L++ A K E D + + E+L +++ + +
Sbjct: 1090 LGAIVEYKKKEELYLQRVAELDKITYERDNFR--QAYEDLRKQRLNEFMAGFYIITNKLK 1147
Query: 131 SIFSLLLPGSQAKLSPPAGKD-ILDGLEVNVAFGGL-WKESLGELSGGQRXXXXXXXXXX 188
+ +L G A+L D +G+ +V WK+ + LSGG++
Sbjct: 1148 ENYQMLTLGGDAELELVDSLDPFAEGIMFSVRPPKKSWKK-IFNLSGGEKTLSSLALVFA 1206
Query: 189 XXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTK 248
+KP PLY +DE+DAALD + + + K +QFII+SL+ MF ++ R
Sbjct: 1207 LHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD---RLI 1263
Query: 249 FVDGNSNVTRTV 260
+ N+T++V
Sbjct: 1264 GIYKTYNITKSV 1275
Score = 39 (18.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 12 KLKEQRDKLERTVDKK 27
KLK Q+DKL++ ++K+
Sbjct: 898 KLKAQQDKLDK-INKQ 912
Score = 39 (18.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 5 EVTRKYQKLK----EQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKT 51
E K+ KL + R+KL+ K +L + ++++ KV P K+
Sbjct: 385 ENKEKFTKLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKS 435
>POMBASE|SPAC10F6.09c [details] [associations]
symbol:psm3 "mitotic cohesin complex subunit Psm3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000794 "condensed nuclear chromosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005694 "chromosome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0008278 "cohesin complex" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISM] [GO:0030892 "mitotic cohesin
complex" evidence=NAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 PomBase:SPAC10F6.09c Pfam:PF02463
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0016567 GO:GO:0000790
GO:GO:0000794 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030892 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF PIR:T37503
RefSeq:NP_593260.1 ProteinModelPortal:O42649 IntAct:O42649
STRING:O42649 EnsemblFungi:SPAC10F6.09c.1 GeneID:2543010
KEGG:spo:SPAC10F6.09c OrthoDB:EOG4TB7KF NextBio:20804043
Uniprot:O42649
Length = 1194
Score = 131 (51.2 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 36/111 (32%), Positives = 50/111 (45%)
Query: 144 LSPPAGKDILD---GLEVNVAFGGLWKESLG--ELSGGQRXXXXXXXXXXXXXFKPAPLY 198
+ P+ K +D G+ + V+F E L +LSGGQ+ PAP
Sbjct: 1063 IDTPSQKSSIDNYTGISIRVSFNSKDDEQLNINQLSGGQKSLCALTLIFAIQRCDPAPFN 1122
Query: 199 ILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKF 249
ILDE DA LD + I M+K KTSQFI + + M A+ + F
Sbjct: 1123 ILDECDANLDAQYRSAIAAMVKEMSKTSQFICTTFRPEMVKVADNFYGVMF 1173
Score = 67 (28.6 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 40/173 (23%), Positives = 73/173 (42%)
Query: 4 HEVTRKYQKLKEQRDKL-ERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLG 62
HEV + EQ K+ ER K++ L R +E K+ ++ P + FI KY+
Sbjct: 897 HEVATRI----EQDAKINERNAAKRSLLLARKKECNEKIKSLGVLPEEA--FI---KYVS 947
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEEL------------ 110
+ S+ VK + L+ ++ +A + + R LL EEL
Sbjct: 948 TSSNAIVKKLHKINEALKDYGSVNKKAYEQFNNFTKQRDSLLARREELRRSQESISELTT 1007
Query: 111 --DEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDGLEVNVA 161
D++K A+ + +V F IF L+P + +L ++ +E +++
Sbjct: 1008 VLDQRKDEAIERTFKQVAKSFSEIFVKLVPAGRGELVMNRRSELSQSIEQDIS 1060
Score = 39 (18.8 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 23/117 (19%), Positives = 53/117 (45%)
Query: 8 RKYQ-KLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLF----ISMKKYLG 62
+ YQ K + ++ LE+ ++++ +++ + + KA L F I +K L
Sbjct: 674 KTYQIKFSDLQESLEKC---RSEIESFDQKITACLDDLQKAQLSLKQFERDHIPLKDELV 730
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALR 119
+++ + + + R L + +E T + +++L ++ELD K AL+
Sbjct: 731 TITGETTDLQESMHHKSRMLELVVLELHTLEQQANDLKSELSSEMDELDPKDVEALK 787
>UNIPROTKB|F1MAD9 [details] [associations]
symbol:Smc4 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:1306680 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 IPI:IPI00372213 RefSeq:NP_001032262.2 UniGene:Rn.163695
Ensembl:ENSRNOT00000013931 GeneID:295107 KEGG:rno:295107
NextBio:638993 Uniprot:F1MAD9
Length = 1286
Score = 152 (58.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 58/266 (21%), Positives = 112/266 (42%)
Query: 1 MNPHEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLLFISMKK 59
++ H KY + + + KL D + +S+ ++E+ +K+P I++ +
Sbjct: 1023 ISEHNSKIKYWQKEISKIKLHPVEDNPVETVSVLSQEDL----EAIKSPDSITNQIALLE 1078
Query: 60 YLGSMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALR 119
+GA+ + + L++ K + S+R + E+L +++
Sbjct: 1079 --AQCREMKPNLGAIAEYKKKEELYLQRVGELDK--ITSERDNFRQAYEDLRKQRLNEFM 1134
Query: 120 EAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFG-----GLWKESLGELS 174
+ + + +L G A+L D LD + F WK+ + LS
Sbjct: 1135 AGFYVITNKLKENYQMLTLGGDAELELV---DSLDPFSEGIMFSVRPPKKSWKK-IFNLS 1190
Query: 175 GGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLK 234
GG++ +KP PLY +DE+DAALD + + + K +QFII+SL+
Sbjct: 1191 GGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLR 1250
Query: 235 EGMFSNANVIFRTKFVDGNSNVTRTV 260
MF ++ R + N+T++V
Sbjct: 1251 NNMFEISD---RLIGIYKTYNITKSV 1273
>UNIPROTKB|F1NX72 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AADN02006734
IPI:IPI00577909 Ensembl:ENSGALT00000023006 Uniprot:F1NX72
Length = 1234
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 45/163 (27%), Positives = 79/163 (48%)
Query: 86 SMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAK 143
SMEA + S E+ +K + EE+ +++ + + + ++ L S QA
Sbjct: 1036 SMEAF-EASRKEARISK--QEFEEVKKRRYELFSQCFEHASIVIDQVYKKLCRNSSAQAF 1092
Query: 144 LSPPAGKD-ILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDE 202
LSP ++ L+G+ N G + LSGG++ F+PAP +ILDE
Sbjct: 1093 LSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALIFAVHSFRPAPFFILDE 1152
Query: 203 VDAALDLSHTQNIGQMLKRH-FKTSQFIIVSLKEGMFSNANVI 244
+DAALD ++ + ++ K Q +++SLKE +S A+ +
Sbjct: 1153 IDAALDNTNIDKVSIFIREQAHKQFQMVVISLKEEFYSKADAL 1195
>UNIPROTKB|F1NX73 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:AADN02006734
IPI:IPI00572844 Ensembl:ENSGALT00000023005 Uniprot:F1NX73
Length = 1238
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 45/163 (27%), Positives = 79/163 (48%)
Query: 86 SMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGS--QAK 143
SMEA + S E+ +K + EE+ +++ + + + ++ L S QA
Sbjct: 1040 SMEAF-EASRKEARISK--QEFEEVKKRRYELFSQCFEHASIVIDQVYKKLCRNSSAQAF 1096
Query: 144 LSPPAGKD-ILDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDE 202
LSP ++ L+G+ N G + LSGG++ F+PAP +ILDE
Sbjct: 1097 LSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALIFAVHSFRPAPFFILDE 1156
Query: 203 VDAALDLSHTQNIGQMLKRH-FKTSQFIIVSLKEGMFSNANVI 244
+DAALD ++ + ++ K Q +++SLKE +S A+ +
Sbjct: 1157 IDAALDNTNIDKVSIFIREQAHKQFQMVVISLKEEFYSKADAL 1199
>UNIPROTKB|F1NDN4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 EMBL:AADN02021066
IPI:IPI00684483 Ensembl:ENSGALT00000032997 ArrayExpress:F1NDN4
Uniprot:F1NDN4
Length = 1274
Score = 148 (57.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 39/152 (25%), Positives = 68/152 (44%)
Query: 96 VESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDG 155
+ ++R + + E+L +++ + + + +L G A+L D LD
Sbjct: 1084 ITNERDRFRQAFEDLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELV---DSLDP 1140
Query: 156 LEVNVAFG-----GLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLS 210
+ F WK+ + LSGG++ +KP PLY +DE+DAALD
Sbjct: 1141 FSEGIMFSVRPPKKSWKK-IFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFK 1199
Query: 211 HTQNIGQMLKRHFKTSQFIIVSLKEGMFSNAN 242
+ + + K +QFII+SL+ MF A+
Sbjct: 1200 NVSIVAFYIYEQTKNAQFIIISLRNNMFEIAD 1231
Score = 45 (20.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 11 QKLKEQRDKLERTVDKKAQLS-------LRNEENQFKVG-AMVKAPLKTLLFISMKKYLG 62
Q+LKE+ +KLE+ KK +L+ LR + + K A ++ K L + +K G
Sbjct: 524 QELKEKENKLEKL--KKEELNAQDLVRNLRQKVEEAKSSLAQHRSRGKVLEALLEQKRSG 581
Query: 63 SMSSFSVKVG 72
S+S ++G
Sbjct: 582 SISGIHGRLG 591
Score = 39 (18.8 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 EVTRKYQKLKEQRDK--LE--RTV-DKKAQLSLRNEE 36
E TR+ QK KE ++K +E +TV D ++++ + E
Sbjct: 440 EETREIQKEKEGKEKELMEFCKTVNDARSKMDVAQAE 476
Score = 37 (18.1 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 11 QKLKEQRDKLERT---VDK------KAQLSLRNEENQFK 40
+KLK Q+DK+++ +D+ KAQ++++ K
Sbjct: 868 RKLKTQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLK 906
>UNIPROTKB|F1NN18 [details] [associations]
symbol:SMC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] InterPro:IPR010935 Pfam:PF06470 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 EMBL:AADN02021066
IPI:IPI00819477 Ensembl:ENSGALT00000039159 ArrayExpress:F1NN18
Uniprot:F1NN18
Length = 609
Score = 148 (57.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 39/152 (25%), Positives = 68/152 (44%)
Query: 96 VESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDG 155
+ ++R + + E+L +++ + + + +L G A+L D LD
Sbjct: 440 ITNERDRFRQAFEDLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELV---DSLDP 496
Query: 156 LEVNVAFG-----GLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLS 210
+ F WK+ + LSGG++ +KP PLY +DE+DAALD
Sbjct: 497 FSEGIMFSVRPPKKSWKK-IFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFK 555
Query: 211 HTQNIGQMLKRHFKTSQFIIVSLKEGMFSNAN 242
+ + + K +QFII+SL+ MF A+
Sbjct: 556 NVSIVAFYIYEQTKNAQFIIISLRNNMFEIAD 587
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 11 QKLKEQRDKLERT---VDK------KAQLSLRNEENQFK 40
+KLK Q+DK+++ +D+ KAQ++++ K
Sbjct: 224 RKLKTQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLK 262
>UNIPROTKB|F1P3C6 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:AADN02021066 IPI:IPI00573837 Ensembl:ENSGALT00000015551
ArrayExpress:F1P3C6 Uniprot:F1P3C6
Length = 1300
Score = 148 (57.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/152 (25%), Positives = 68/152 (44%)
Query: 96 VESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILDG 155
+ ++R + + E+L +++ + + + +L G A+L D LD
Sbjct: 1110 ITNERDRFRQAFEDLRKQRLNEFMAGFNVITNKLKENYQMLTLGGDAELELV---DSLDP 1166
Query: 156 LEVNVAFG-----GLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLS 210
+ F WK+ + LSGG++ +KP PLY +DE+DAALD
Sbjct: 1167 FSEGIMFSVRPPKKSWKK-IFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFK 1225
Query: 211 HTQNIGQMLKRHFKTSQFIIVSLKEGMFSNAN 242
+ + + K +QFII+SL+ MF A+
Sbjct: 1226 NVSIVAFYIYEQTKNAQFIIISLRNNMFEIAD 1257
Score = 45 (20.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 11 QKLKEQRDKLERTVDKKAQLS-------LRNEENQFKVG-AMVKAPLKTLLFISMKKYLG 62
Q+LKE+ +KLE+ KK +L+ LR + + K A ++ K L + +K G
Sbjct: 550 QELKEKENKLEKL--KKEELNAQDLVRNLRQKVEEAKSSLAQHRSRGKVLEALLEQKRSG 607
Query: 63 SMSSFSVKVG 72
S+S ++G
Sbjct: 608 SISGIHGRLG 617
Score = 39 (18.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 5 EVTRKYQKLKEQRDK--LE--RTV-DKKAQLSLRNEE 36
E TR+ QK KE ++K +E +TV D ++++ + E
Sbjct: 466 EETREIQKEKEGKEKELMEFCKTVNDARSKMDVAQAE 502
Score = 37 (18.1 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 11 QKLKEQRDKLERT---VDK------KAQLSLRNEENQFK 40
+KLK Q+DK+++ +D+ KAQ++++ K
Sbjct: 894 RKLKTQQDKVDKINQEIDECTSAITKAQVAIKTAHRNLK 932
>SGD|S000001886 [details] [associations]
symbol:SMC1 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0000217 "DNA secondary structure binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0003680 "AT DNA
binding" evidence=IDA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 SGD:S000001886
Pfam:PF02463 GO:GO:0005524 GO:GO:0051301 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0006302
GO:GO:0030261 GO:GO:0003680 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 PDB:1W1W PDBsum:1W1W GO:GO:0034990
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 OrthoDB:EOG42VCQD EMBL:L00602
PIR:A49464 RefSeq:NP_116647.1 ProteinModelPortal:P32908 SMR:P32908
DIP:DIP-2982N IntAct:P32908 MINT:MINT-434606 STRING:P32908
PaxDb:P32908 PeptideAtlas:P32908 EnsemblFungi:YFL008W GeneID:850540
KEGG:sce:YFL008W CYGD:YFL008w EvolutionaryTrace:P32908
NextBio:966301 Genevestigator:P32908 GermOnline:YFL008W
GO:GO:0000217 Uniprot:P32908
Length = 1225
Score = 147 (56.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 173 LSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTS-QFIIV 231
LSGG++ ++P+P ++LDEVDAALD+++ Q I ++RH QFI++
Sbjct: 1129 LSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVI 1188
Query: 232 SLKEGMFSNANVI 244
SLK MF ++ +
Sbjct: 1189 SLKNTMFEKSDAL 1201
Score = 44 (20.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 8 RKYQKLKEQRDKLERTVDK--KAQLSLRNEENQFKVG 42
++Y++LKE+ +KL ++ + K + + E +K G
Sbjct: 180 KEYEELKEKIEKLSKSATESIKNRRRIHGELKTYKEG 216
Score = 43 (20.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLL--FISMKK 59
HEV +L+ LER + + + + N E + +KA K +L F+ +KK
Sbjct: 1006 HEVEEILNELQPNARALERYDEAEGRFEVINNETE-----QLKAEEKKILNQFLKIKK 1058
Score = 40 (19.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 8 RKYQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
R + +LK ++ + + + + QL +NE +F+
Sbjct: 205 RIHGELKTYKEGINKNEEYRKQLDKKNELQKFQ 237
Score = 37 (18.1 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 22/114 (19%), Positives = 47/114 (41%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF-KVGAMVKAPLKTL--LFISMKKYL 61
E+T K L + L+ ++ + + SL+ ++ F K A++ L +F +K +
Sbjct: 251 ELTDKLSALNSEISSLKGKINNEMK-SLQRSKSSFVKESAVISKQKSKLDYIFKDKEKLV 309
Query: 62 GSMSSFSVK---VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDE 112
+ V G + + + + + +K+ VE +L KV+ E
Sbjct: 310 SDLRLIKVPQQAAGKRISHIEKRIESLQKDLQRQKTYVERFETQL-KVVTRSKE 362
Score = 37 (18.1 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 21/117 (17%), Positives = 49/117 (41%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSM 64
E+ R+ K +Q K TV+ K Q + + L+ + MK
Sbjct: 809 ELMRQQSKELQQLQKQILTVENKLQFETDRLSTTQRRYEKAQKDLENAQ-VEMKSLEEQE 867
Query: 65 SSFSVKVGAMVKAPLRTLLFISMEAMTKKSIV-ESDRAKLLKVIEELDEKKKIALRE 120
+ +K+G+ +++ L ++ + KK + +S+ ++E+++ ++ RE
Sbjct: 868 YAIEMKIGS-IESKLEEHKN-HLDELQKKFVTKQSELNSSEDILEDMNSNLQVLKRE 922
Score = 36 (17.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 5 EVTRKYQKLKEQRDKLERTVDK 26
++ Q LK +RD ++ ++K
Sbjct: 911 DMNSNLQVLKRERDGIKEDIEK 932
>UNIPROTKB|E2RCX4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:AAEX03017331 RefSeq:XP_535848.2
Ensembl:ENSCAFT00000022729 GeneID:478679 KEGG:cfa:478679
Uniprot:E2RCX4
Length = 1288
Score = 151 (58.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFG 130
+GA+ + + L++ A K E D + + E+L +++ + +
Sbjct: 1090 LGAIAEYKKKEELYLQRVAELDKITCERDHFR--QAYEDLRKQRLNEFMAGFYIITNKLK 1147
Query: 131 SIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFG-----GLWKESLGELSGGQRXXXXXXX 185
+ +L G A+L D LD + F WK+ + LSGG++
Sbjct: 1148 ENYQMLTLGGDAELELV---DSLDPFSEGIMFSVRPPKKSWKK-IFNLSGGEKTLSSLAL 1203
Query: 186 XXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIF 245
+KP PLY +DE+DAALD + + + K +QFII+SL+ MF ++
Sbjct: 1204 VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD--- 1260
Query: 246 RTKFVDGNSNVTRTV 260
R + N+T++V
Sbjct: 1261 RLIGIYKTYNITKSV 1275
Score = 39 (18.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 12 KLKEQRDKLERTVDKK 27
KLK Q+DKL++ ++K+
Sbjct: 898 KLKAQQDKLDK-INKQ 912
>ZFIN|ZDB-GENE-020419-21 [details] [associations]
symbol:smc4 "structural maintenance of chromosomes
4" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-020419-21 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 CTD:10051 HOGENOM:HOG000184777 HOVERGEN:HBG106696
HSSP:Q9X0R4 EMBL:AY099521 IPI:IPI00504040 RefSeq:NP_775360.1
UniGene:Dr.77769 ProteinModelPortal:Q8JGS5 STRING:Q8JGS5
PRIDE:Q8JGS5 GeneID:192332 KEGG:dre:192332 InParanoid:Q8JGS5
NextBio:20797168 ArrayExpress:Q8JGS5 Bgee:Q8JGS5 Uniprot:Q8JGS5
Length = 1289
Score = 146 (56.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 166 WKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKT 225
WK+ + LSGG++ FKP PLY +DE+DAALD + + + K
Sbjct: 1184 WKK-IYNLSGGEKTLSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKN 1242
Query: 226 SQFIIVSLKEGMFSNAN 242
+QFII+SL+ MF A+
Sbjct: 1243 AQFIIISLRNNMFEMAD 1259
Score = 45 (20.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 35/153 (22%), Positives = 74/153 (48%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQF-KVGAMVKAPLKTLLFISMK-KYLG 62
EVT+ Q ++++++LE V K A+ LR+ +N K A +++ + L + + K L
Sbjct: 785 EVTQ-LQDCQKRKNQLEEKVHK-ARCELRDMKNTLEKYTATIQSLTEQELHLKPQIKDLE 842
Query: 63 SMSSFSVKVGAMVKAPLRTLLFI--SMEAMTKKS-IVESDRAKLLKVIEELDEKKKIALR 119
+ + A K ++L EA + K+ VE++ +L +I +++ K A +
Sbjct: 843 ANVIAAAPDKAKQKQMEKSLEAYRKDFEAASNKAGKVEAEVKRLHTLIVDINSHKLKAQQ 902
Query: 120 EAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDI 152
+ ++NT S + +Q + AG+++
Sbjct: 903 DKLDQINTQLDQCSSAVTK-AQVAIKT-AGRNL 933
Score = 41 (19.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 31/150 (20%), Positives = 70/150 (46%)
Query: 14 KEQRDKLERTVDKKA-QLS-LRNEENQFKVGA-MVKAPLKTLLFISMKKYLGSMSSFSVK 70
+EQ DK+E ++K+ QL + +NQ + + L+ + +++KY ++ S + +
Sbjct: 772 QEQLDKMESALNKEVTQLQDCQKRKNQLEEKVHKARCELRDMKN-TLEKYTATIQSLTEQ 830
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFG 130
+K ++ L + A K+ + ++ K +E + + A +A KV +
Sbjct: 831 E-LHLKPQIKDLEANVIAAAPDKA----KQKQMEKSLEAYRKDFEAASNKAG-KVEAEVK 884
Query: 131 SIFSLLLPGSQAKLSPPAGKDILDGLEVNV 160
+ +L++ + KL A +D LD + +
Sbjct: 885 RLHTLIVDINSHKLK--AQQDKLDQINTQL 912
Score = 39 (18.8 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 15 EQRDKLERTVDKKAQLSLRNEENQFKV 41
E R+KL+ T K +L + +++Q K+
Sbjct: 398 EVREKLKHTKSKTKKLQKQLQKDQEKL 424
Score = 39 (18.8 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 8/33 (24%), Positives = 21/33 (63%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNEENQFKVGAM 44
K+ Q ++L++ + Q+S ++++ + +VG M
Sbjct: 546 KIPAQEEQLKKDERELEQISEQDKQTRAQVGDM 578
Score = 39 (18.8 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFK-VGAMVKA 47
E+T + +KL+EQ ++ ++ A+ +L ++Q + V +KA
Sbjct: 956 ELTEQLKKLEEQAGEIMQSTSS-AEKALPEVQDQHRAVVQEIKA 998
>GENEDB_PFALCIPARUM|PFD0685c [details] [associations]
symbol:PFD0685c "chromosome associated protein,
putative" species:5833 "Plasmodium falciparum" [GO:0000228 "nuclear
chromosome" evidence=ISS] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0051301 GO:GO:0006275 GO:GO:0000785 HSSP:P58301 GO:GO:0000070
EMBL:AL844503 GO:GO:0003680 eggNOG:COG1196 SUPFAM:SSF75553
GenomeReviews:AL844503_GR GO:GO:0034990 KO:K06669
RefSeq:XP_001351448.1 ProteinModelPortal:Q8I1U7 IntAct:Q8I1U7
MINT:MINT-1568808 PRIDE:Q8I1U7 EnsemblProtists:PFD0685c:mRNA
GeneID:812569 KEGG:pfa:PFD0685c EuPathDB:PlasmoDB:PF3D7_0414000
HOGENOM:HOG000282685 OMA:CASTINS ProtClustDB:CLSZ2514476
Uniprot:Q8I1U7
Length = 1193
Score = 113 (44.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 151 DILDGLEVNVAFGGLWKES--LGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALD 208
D + G+ +N+ K + + ELSGG+R + DE+DAALD
Sbjct: 1063 DKITGISINITSNDDEKMTYTIQELSGGERSIVAICLFLCLNKIDNFSFFFFDEIDAALD 1122
Query: 209 LSHTQNIGQMLKR-HFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
H N+ +LK + +QFII + ++ + ++ ++ K VD S +++
Sbjct: 1123 TIHRDNLSLLLKELAHRGTQFIITTFRKELLEYSDNMYIVKIVDRESYISK 1173
Score = 82 (33.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEE-NQFKV--GAMVKAPLKTLLFISMKKY 60
H++ + ++L+ K E KK L +E +++ + A LK++ + +KKY
Sbjct: 895 HQMNQINEELRILEGKEENIRKKKVLLPQGIQELEEYRTYDKQQLSAKLKSVT-MELKKY 953
Query: 61 LGSMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALRE 120
S+ + K G L L+ E + + S + +I+ + +KK AL
Sbjct: 954 ----SNVNEKAGDR----LNILMNDFNELKKRHEEINSSHKNIKDMIQHIGKKKDEALEA 1005
Query: 121 AWLKVNTDFGSIFSLLLPGSQAKL 144
++K+N F FSLL +A L
Sbjct: 1006 TYVKINKYFSEYFSLLFKNRKASL 1029
>UNIPROTKB|Q8I1U7 [details] [associations]
symbol:PFD0685c "Structural maintenance of chromosomes
protein 3 homolog" species:36329 "Plasmodium falciparum 3D7"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0000228 "nuclear chromosome" evidence=ISS] [GO:0000785
"chromatin" evidence=ISS] [GO:0003680 "AT DNA binding"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=ISS] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0051301
GO:GO:0006275 GO:GO:0000785 HSSP:P58301 GO:GO:0000070 EMBL:AL844503
GO:GO:0003680 eggNOG:COG1196 SUPFAM:SSF75553
GenomeReviews:AL844503_GR GO:GO:0034990 KO:K06669
RefSeq:XP_001351448.1 ProteinModelPortal:Q8I1U7 IntAct:Q8I1U7
MINT:MINT-1568808 PRIDE:Q8I1U7 EnsemblProtists:PFD0685c:mRNA
GeneID:812569 KEGG:pfa:PFD0685c EuPathDB:PlasmoDB:PF3D7_0414000
HOGENOM:HOG000282685 OMA:CASTINS ProtClustDB:CLSZ2514476
Uniprot:Q8I1U7
Length = 1193
Score = 113 (44.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 151 DILDGLEVNVAFGGLWKES--LGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALD 208
D + G+ +N+ K + + ELSGG+R + DE+DAALD
Sbjct: 1063 DKITGISINITSNDDEKMTYTIQELSGGERSIVAICLFLCLNKIDNFSFFFFDEIDAALD 1122
Query: 209 LSHTQNIGQMLKR-HFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNVTR 258
H N+ +LK + +QFII + ++ + ++ ++ K VD S +++
Sbjct: 1123 TIHRDNLSLLLKELAHRGTQFIITTFRKELLEYSDNMYIVKIVDRESYISK 1173
Score = 82 (33.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEE-NQFKV--GAMVKAPLKTLLFISMKKY 60
H++ + ++L+ K E KK L +E +++ + A LK++ + +KKY
Sbjct: 895 HQMNQINEELRILEGKEENIRKKKVLLPQGIQELEEYRTYDKQQLSAKLKSVT-MELKKY 953
Query: 61 LGSMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALRE 120
S+ + K G L L+ E + + S + +I+ + +KK AL
Sbjct: 954 ----SNVNEKAGDR----LNILMNDFNELKKRHEEINSSHKNIKDMIQHIGKKKDEALEA 1005
Query: 121 AWLKVNTDFGSIFSLLLPGSQAKL 144
++K+N F FSLL +A L
Sbjct: 1006 TYVKINKYFSEYFSLLFKNRKASL 1029
>UNIPROTKB|E9PD53 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 EMBL:AC024221 HGNC:HGNC:14013
IPI:IPI00793575 ProteinModelPortal:E9PD53 SMR:E9PD53
Ensembl:ENST00000469762 UCSC:uc003fdi.3 ArrayExpress:E9PD53
Bgee:E9PD53 Uniprot:E9PD53
Length = 1263
Score = 150 (57.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFG 130
+GA+ + + L++ A K E D + + E+L +++ + +
Sbjct: 1065 LGAIAEYKKKEELYLQRVAELDKITYERDSFR--QAYEDLRKQRLNEFMAGFYIITNKLK 1122
Query: 131 SIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFG-----GLWKESLGELSGGQRXXXXXXX 185
+ +L G A+L D LD + F WK+ + LSGG++
Sbjct: 1123 ENYQMLTLGGDAELELV---DSLDPFSEGIMFSVRPPKKSWKK-IFNLSGGEKTLSSLAL 1178
Query: 186 XXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIF 245
+KP PLY +DE+DAALD + + + K +QFII+SL+ MF ++
Sbjct: 1179 VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD--- 1235
Query: 246 RTKFVDGNSNVTRTV 260
R + N+T++V
Sbjct: 1236 RLIGIYKTYNITKSV 1250
Score = 39 (18.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 12 KLKEQRDKLERTVDKK 27
KLK Q+DKL++ ++K+
Sbjct: 873 KLKAQQDKLDK-INKQ 887
Score = 38 (18.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 17 RDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKT 51
R+KL+ K +L + ++++ KV P K+
Sbjct: 376 REKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKS 410
>UNIPROTKB|Q9NTJ3 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IDA;TAS]
[GO:0007076 "mitotic chromosome condensation" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0005524 "ATP binding"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 EMBL:CH471052
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 KO:K06675 SUPFAM:SSF75553
EMBL:AC024221 OMA:IAIEFLT EMBL:AB019987 EMBL:AL136877 EMBL:AL833949
EMBL:AF092564 IPI:IPI00328298 IPI:IPI00411559 PIR:T46486
RefSeq:NP_001002800.1 RefSeq:NP_005487.3 UniGene:Hs.58992
ProteinModelPortal:Q9NTJ3 SMR:Q9NTJ3 IntAct:Q9NTJ3
MINT:MINT-5005675 STRING:Q9NTJ3 PhosphoSite:Q9NTJ3 DMDM:30173386
PaxDb:Q9NTJ3 PeptideAtlas:Q9NTJ3 PRIDE:Q9NTJ3 DNASU:10051
Ensembl:ENST00000344722 Ensembl:ENST00000357388
Ensembl:ENST00000360111 Ensembl:ENST00000462787 GeneID:10051
KEGG:hsa:10051 UCSC:uc003fdh.3 UCSC:uc010hwd.3 CTD:10051
GeneCards:GC03P160117 HGNC:HGNC:14013 HPA:HPA018259 HPA:HPA029449
MIM:605575 neXtProt:NX_Q9NTJ3 PharmGKB:PA37834 HOGENOM:HOG000184777
HOVERGEN:HBG106696 InParanoid:Q9NTJ3 OrthoDB:EOG4PZJ5V
PhylomeDB:Q9NTJ3 GenomeRNAi:10051 NextBio:37969 ArrayExpress:Q9NTJ3
Bgee:Q9NTJ3 CleanEx:HS_SMC4 Genevestigator:Q9NTJ3
GermOnline:ENSG00000113810 Uniprot:Q9NTJ3
Length = 1288
Score = 150 (57.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFG 130
+GA+ + + L++ A K E D + + E+L +++ + +
Sbjct: 1090 LGAIAEYKKKEELYLQRVAELDKITYERDSFR--QAYEDLRKQRLNEFMAGFYIITNKLK 1147
Query: 131 SIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFG-----GLWKESLGELSGGQRXXXXXXX 185
+ +L G A+L D LD + F WK+ + LSGG++
Sbjct: 1148 ENYQMLTLGGDAELELV---DSLDPFSEGIMFSVRPPKKSWKK-IFNLSGGEKTLSSLAL 1203
Query: 186 XXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIF 245
+KP PLY +DE+DAALD + + + K +QFII+SL+ MF ++
Sbjct: 1204 VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD--- 1260
Query: 246 RTKFVDGNSNVTRTV 260
R + N+T++V
Sbjct: 1261 RLIGIYKTYNITKSV 1275
Score = 39 (18.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 12 KLKEQRDKLERTVDKK 27
KLK Q+DKL++ ++K+
Sbjct: 898 KLKAQQDKLDK-INKQ 912
Score = 38 (18.4 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 17 RDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKT 51
R+KL+ K +L + ++++ KV P K+
Sbjct: 401 REKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKS 435
>UNIPROTKB|E1BMZ9 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:DAAA02002417 EMBL:DAAA02002418 IPI:IPI00703154
Ensembl:ENSBTAT00000007705 ArrayExpress:E1BMZ9 Uniprot:E1BMZ9
Length = 1288
Score = 150 (57.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 46/192 (23%), Positives = 86/192 (44%)
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFG 130
+GA+ + L++ A K + ++R + E+L +++ + +
Sbjct: 1090 LGAIADYKKKEELYLQRVAELDK--ITNERDNFRQAYEDLRKQRLNEFMAGFYIITNKLK 1147
Query: 131 SIFSLLLPGSQAKLSPPAGKD-ILDGLEVNVAFGGL-WKESLGELSGGQRXXXXXXXXXX 188
+ +L G A+L D +G+ +V WK+ + LSGG++
Sbjct: 1148 ENYQMLTLGGDAELDLVDSMDPFSEGITFSVRPPKKSWKK-IFNLSGGEKTLSSLALVFA 1206
Query: 189 XXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTK 248
+KP PLY +DE+DAALD + + + K +QFII+SL+ MF ++ R
Sbjct: 1207 LHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD---RLI 1263
Query: 249 FVDGNSNVTRTV 260
+ N+T++V
Sbjct: 1264 GIYKTYNITKSV 1275
Score = 39 (18.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 8/16 (50%), Positives = 14/16 (87%)
Query: 12 KLKEQRDKLERTVDKK 27
KLK Q+DKL++ ++K+
Sbjct: 898 KLKAQQDKLDK-INKQ 912
>UNIPROTKB|P50532 [details] [associations]
symbol:smc4 "Structural maintenance of chromosomes protein
4" species:8355 "Xenopus laevis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 KO:K06675 SUPFAM:SSF75553
CTD:10051 HOVERGEN:HBG106696 EMBL:U13673 PIR:A55094
RefSeq:NP_001081371.1 UniGene:Xl.927 ProteinModelPortal:P50532
IntAct:P50532 GeneID:397799 KEGG:xla:397799 Xenbase:XB-GENE-5865892
Uniprot:P50532
Length = 1290
Score = 147 (56.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 43/177 (24%), Positives = 78/177 (44%)
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFG 130
+GA+ + + L++ A + + ++R + E+L +++ + +
Sbjct: 1084 LGAIAEYKKKEELYLQRVAELDE--ITNERDSFRRAYEDLRKQRLNEFMAGFNIITNKLK 1141
Query: 131 SIFSLLLPGSQAKLSPPAGKDILDGLEVNVAFG-----GLWKESLGELSGGQRXXXXXXX 185
+ +L G A+L D LD + F WK+ + LSGG++
Sbjct: 1142 ENYQMLTLGGDAELELV---DSLDPFSEGIMFSVRPPKKSWKK-IFNLSGGEKTLSSLAL 1197
Query: 186 XXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNAN 242
+KP PLY +DE+DAALD + + + K +QFII+SL+ MF A+
Sbjct: 1198 VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIAD 1254
>TAIR|locus:2045159 [details] [associations]
symbol:TTN7 "AT2G27170" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0007059 "chromosome
segregation" evidence=ISS;IMP] [GO:0008278 "cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 EMBL:CP002685 GO:GO:0005819 GO:GO:0000785
GO:GO:0003682 HSSP:P01096 GO:GO:0016363 EMBL:AC007154 EMBL:AC007290
GO:GO:0008278 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
PROSITE:PS51131 EMBL:AJ504805 EMBL:AY525642 EMBL:AK220965
EMBL:AK221283 EMBL:AK226305 EMBL:AK229499 IPI:IPI00549149
PIR:F84669 RefSeq:NP_001077968.1 RefSeq:NP_180285.4
UniGene:At.28786 ProteinModelPortal:Q56YN8 SMR:Q56YN8 STRING:Q56YN8
PRIDE:Q56YN8 EnsemblPlants:AT2G27170.1 EnsemblPlants:AT2G27170.2
GeneID:817259 KEGG:ath:AT2G27170 TAIR:At2g27170
HOGENOM:HOG000166512 InParanoid:Q56YN8 KO:K06669 OMA:NKVLEHF
PhylomeDB:Q56YN8 ProtClustDB:CLSN2692426 Genevestigator:Q56YN8
Uniprot:Q56YN8
Length = 1204
Score = 117 (46.2 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 155 GLEVNVAFGGLWKESL-GELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQ 213
G++V V+F G + L +LSGGQ+ PAP Y+ DE+DAALD +
Sbjct: 1080 GVKVKVSFTGQGETQLMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRT 1139
Query: 214 NIGQMLKRHFKT--SQFIIVSLKEGMFSNANVIF 245
+G +++R +QFI + + + A+ I+
Sbjct: 1140 AVGNLIRRLADDYGTQFITTTFRPELVRVADKIY 1173
Score = 74 (31.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSM 64
E RKYQ+L +QR LE T+ K R + Q +V + T ++ ++K
Sbjct: 208 EELRKYQQLDKQRKSLEYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEKAQDDS 267
Query: 65 SSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELD 111
S + + K L+TL +K VE+ + K LK +L+
Sbjct: 268 KSLDESLKELTKE-LQTLY-------KEKETVEAQQTKALKKKTKLE 306
Score = 50 (22.7 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 88 EAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPP 147
E +++ +++ K+ ++I LD++K ++ + V F +FS L+ L
Sbjct: 989 ELQNRQAELDAGDEKIKELITVLDQRKDESIERTFKGVAHHFRDVFSELVQDGYGNLIIM 1048
Query: 148 AGKDI 152
KD+
Sbjct: 1049 KKKDL 1053
Score = 50 (22.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 25/112 (22%), Positives = 50/112 (44%)
Query: 1 MNPHEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKY 60
+NP K +K Q D++ER +KA+L N + ++A + ++ S+
Sbjct: 790 LNPEIKDLKEKKFAYQADRIERET-RKAELEANIATNLKRRITELQATIASIDDDSLPSS 848
Query: 61 LGSMSSFSVKVGAMVKAPLRTLLFI--SMEAMTKK-SIVESDRAKLLKVIEE 109
G+ V + L + S++ TK+ ++ ++AKL K +E+
Sbjct: 849 AGTKEQELDDAKLSVNEAAKELKSVCDSIDEKTKQIKKIKDEKAKL-KTLED 899
Score = 40 (19.1 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 8/36 (22%), Positives = 25/36 (69%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFK 40
E T++ +K+K+++ KL +T++ + +L++ + + +
Sbjct: 879 EKTKQIKKIKDEKAKL-KTLEDDCKGTLQDLDKKLE 913
>CGD|CAL0001080 [details] [associations]
symbol:SMC1 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0001080
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
EMBL:AACQ01000091 EMBL:AACQ01000090 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06636 RefSeq:XP_715092.1 RefSeq:XP_715143.1
ProteinModelPortal:Q5A021 SMR:Q5A021 STRING:Q5A021 GeneID:3643221
GeneID:3643229 KEGG:cal:CaO19.11845 KEGG:cal:CaO19.4367
Uniprot:Q5A021
Length = 1240
Score = 139 (54.0 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 31/89 (34%), Positives = 53/89 (59%)
Query: 173 LSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQMLKRHFKTS-QFIIV 231
LSGG++ ++P+P ++LDE+DAALD ++ IG +K++ + QFI++
Sbjct: 1132 LSGGEKTMAALALLFAIHSYQPSPFFVLDEIDAALDNANVARIGNYIKKYAGPNFQFIVI 1191
Query: 232 SLKEGMF--SNANV-IFRTKFVDGNSNVT 257
SLK +F S+A V I+R + + + VT
Sbjct: 1192 SLKNSLFEKSDALVGIYREQRENSSKTVT 1220
Score = 48 (22.0 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 4 HEVTRKYQKLKEQRDKL-ERTVDK-KAQLSLRNEENQFK 40
+E +Y++LKE+ +K E T + +L +E Q+K
Sbjct: 175 NEYINEYERLKEEHEKAHELTTSVFSRKRTLNSESKQYK 213
Score = 45 (20.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 33/125 (26%), Positives = 59/125 (47%)
Query: 1 MNPHEVTRKYQKLKEQRDKLERT-VDKKA-QLSLRNEEN--QFKVGAMVK--APLKTLLF 54
+N + ++ + +++ D +R + +A Q SL N+ N + KVG +VK A KT +
Sbjct: 288 LNAKKQKQQTEAAQQKIDSTKRELIPVEANQRSLSNKINFHKLKVGDLVKDIARQKTQVS 347
Query: 55 ISMKKYLGSMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVI-EELDEK 113
S+++ L A + A + + IS EA + E R+K L EL+E+
Sbjct: 348 -SVERQLRDAQRMFDDFQAKIAAAVASSTNISPEAQKE---YEELRSKFLAENGSELEEQ 403
Query: 114 KKIAL 118
+ L
Sbjct: 404 ISLLL 408
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 36/176 (20%), Positives = 72/176 (40%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSM 64
++ + + K Q +ER + + AQ ++ Q K+ A V A + + K+Y
Sbjct: 334 DLVKDIARQKTQVSSVERQL-RDAQRMF--DDFQAKIAAAV-ASSTNISPEAQKEYEELR 389
Query: 65 SSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLLKVIEELDEKKKIALREAWLK 124
S F + G+ ++ + LL + KS +E+ + I EL+ L+
Sbjct: 390 SKFLAENGSELEEQISLLLNNKDSLNSAKSNLENQKTNAEHRIAELESIVATDLKSKLHD 449
Query: 125 VNTDFGSIFSLLLPGSQAKLSPPAGKDIL--DGLEVNVAFGGLWKESLGELSGGQR 178
V+ + + +A+ + KD + L++N + + L EL+ QR
Sbjct: 450 VSNEINEVLDKKSDKVEARNALIKQKDEFNHEELKLNTRLRDVLVK-LDELASQQR 504
Score = 41 (19.5 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 12 KLKEQRDKLERTVDK-KAQLS-LRNEENQFKVGAMVKAPLKT 51
K+ ++ KLE ++DK +A+ L+ E +QF +++ LKT
Sbjct: 869 KVLTEKKKLEESLDKAEAEYEVLQTEISQFDDS--MQSQLKT 908
>UNIPROTKB|G3N365 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
GeneTree:ENSGT00580000081628 EMBL:DAAA02059205
Ensembl:ENSBTAT00000063829 Uniprot:G3N365
Length = 1216
Score = 136 (52.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 139 GSQAKLSPPAGKDILDGLEVNVAFGGLWKE--SLGELSGGQRXXXXXXXXXXXXXFKPAP 196
GS ++ S P+ D G+ + V+F G E + +LSGGQ+ PAP
Sbjct: 1079 GSGSQSSVPS-VDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAP 1137
Query: 197 LYILDEVDAALDLSHTQNIGQMLKRHFKTSQFIIVSLKEGMFSNANVIFRTKFVDGNSNV 256
Y+ DE+D ALD H + + M+ +QFI + + + +A+ + KF + S++
Sbjct: 1138 FYLFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHI 1197
Score = 47 (21.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 32/130 (24%), Positives = 59/130 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKA--PLKTLLFISMKKYLG 62
E+ KL E K E + +K QL ++ + K+ + + LKT + +MK+
Sbjct: 231 ELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKIS-AMKE--- 286
Query: 63 SMSSFSVKVGAMVKAPLRTLLFISMEAMTKKSIVESDRAKLL-----KVIEELDEKKKIA 117
S + +K RT L + + + + S++ K L K++E+++EK+K
Sbjct: 287 EKEQLSAERQEQIKQ--RTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQK-E 343
Query: 118 LREAWLKVNT 127
L E K N+
Sbjct: 344 LAETEPKFNS 353
Score = 44 (20.5 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 7/17 (41%), Positives = 14/17 (82%)
Query: 5 EVTRKYQKLKEQRDKLE 21
E+ RKY ++K ++D+L+
Sbjct: 450 ELDRKYYEVKNKKDELQ 466
Score = 41 (19.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQ-LSLRNEENQFKVGAMVKAPLKTLL 53
+EV K +L+ +R+ L R + + Q L+ + E+ + K + A K +L
Sbjct: 456 YEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAIL 506
>ASPGD|ASPL0000008486 [details] [associations]
symbol:sudA species:162425 "Emericella nidulans"
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0000785
"chromatin" evidence=ISS] [GO:0007067 "mitosis" evidence=IGI;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008278
"cohesin complex" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0051301 GO:GO:0007067
EMBL:AACD01000107 EMBL:BN001301 GO:GO:0051276 eggNOG:COG1196
SUPFAM:SSF75553 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
OrthoDB:EOG4TB7KF EMBL:U40146 PIR:S65799 RefSeq:XP_663968.1
ProteinModelPortal:Q00737 STRING:Q00737 GeneID:2871258
KEGG:ani:AN6364.2 Uniprot:Q00737
Length = 1215
Score = 110 (43.8 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 31/113 (27%), Positives = 52/113 (46%)
Query: 155 GLEVNVAFGGLW--KESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHT 212
G+ ++V+F ++ + +LSGGQ+ PAP Y+ DE+DA LD +
Sbjct: 1093 GVGISVSFNSKHDDQQRIQQLSGGQKSLCALALVFAIQACDPAPFYLFDEIDANLDAQYR 1152
Query: 213 QNIGQMLKRHFKTS--QFIIVSLKEGMFSNANVIFRTKFVDGNSNVTRTVNRK 263
+ QMLK ++ QFI + + M A + F S + V+R+
Sbjct: 1153 TAVAQMLKTISDSTNGQFICTTFRPEMLHVAEKCYGVSFRQKASTID-VVSRE 1204
Score = 72 (30.4 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 36/154 (23%), Positives = 70/154 (45%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSM 64
E R+ ++L + +K +R ++K Q + + A ++ L L + KY +
Sbjct: 909 ESRRELEELAKSIEKHQRRMEKSMQKKAALTKQAAECAANIR-DLGVLPDEAFTKYKNTD 967
Query: 65 SSFSVKVGAMVKAPLRTLLFISMEAM------TK-KSIVESDRAKL---LKVIEEL---- 110
S+ VK V L+ ++ +A TK + + S R +L K I++L
Sbjct: 968 SNTVVKKLHKVNEALKKYAHVNKKAFEQYNNFTKQRETLTSRREELDASQKSIDDLISVL 1027
Query: 111 DEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKL 144
D +K A+ + +V+ +F +IF L+P + +L
Sbjct: 1028 DHRKDEAIERTFKQVSREFATIFEKLVPAGRGRL 1061
Score = 61 (26.5 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 27/102 (26%), Positives = 50/102 (49%)
Query: 11 QKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMSSFSVK 70
Q+L + + +E+ + +L+ RN E++ ++ + K+ K M+K + ++ + K
Sbjct: 884 QRLAQVDESMEQANSRVTELTQRNAESRRELEELAKSIEKHQR--RMEKSMQKKAALT-K 940
Query: 71 VGAMVKAPLRTLLFISMEAMTKKSIVESDRA--KLLKVIEEL 110
A A +R L + EA TK +S+ KL KV E L
Sbjct: 941 QAAECAANIRDLGVLPDEAFTKYKNTDSNTVVKKLHKVNEAL 982
>TIGR_CMR|SO_2898 [details] [associations]
symbol:SO_2898 "SMC family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0005524 "ATP binding"
evidence=ISS] [GO:0007059 "chromosome segregation" evidence=ISS]
[GO:0030261 "chromosome condensation" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR011890
PIRSF:PIRSF005719 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 KO:K03529 TIGRFAMs:TIGR02168 HSSP:Q9X0R4
HOGENOM:HOG000036391 RefSeq:NP_718470.1 ProteinModelPortal:Q7ZAJ7
GeneID:1170588 KEGG:son:SO_2898 PATRIC:23525438 OMA:ELYVEEK
ProtClustDB:CLSK906922 Uniprot:Q7ZAJ7
Length = 1145
Score = 140 (54.3 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 101 AKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSPPAGKDILD-GLEVN 159
A L + I ++D++ + + + VN D G +F + G +A L+ D+L+ G+ +
Sbjct: 975 ATLEEAIRKIDKETRTRFKATFDAVNEDLGRLFPKVFGGGRAYLALTED-DLLETGVTIM 1033
Query: 160 VAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHTQNIGQML 219
G ++ LSGG++ PAP +LDEVDA LD ++ + ++L
Sbjct: 1034 AQPPGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAPLDDANVERFCRLL 1093
Query: 220 KRHFKTSQFIIVS 232
K ++ QFI +S
Sbjct: 1094 KEMSQSVQFIYIS 1106
Score = 36 (17.7 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 12 KLKEQRDKLERTVDKKAQLSLRNE 35
K K++ KLE + L LR E
Sbjct: 869 KQKQELGKLEGLTQSLSTLKLRRE 892
>UNIPROTKB|Q5LNH7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0003824 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K03529
RefSeq:YP_168431.1 ProteinModelPortal:Q5LNH7 GeneID:3194939
KEGG:sil:SPO3228 PATRIC:23379903 HOGENOM:HOG000036390 OMA:AHERVQA
ProtClustDB:CLSK864767 Uniprot:Q5LNH7
Length = 1151
Score = 134 (52.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 43/149 (28%), Positives = 72/149 (48%)
Query: 88 EAMTK-KSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSP 146
++++K KS +E L I L+ + + L A+ +VN++F +F L G +A L
Sbjct: 965 DSLSKEKSDLEEAVKTLRSGIASLNREGRERLLTAFEQVNSNFAMLFRHLFGGGEANLVM 1024
Query: 147 PAGKDILD-GLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDA 205
D LD GLE+ G +L LSGG++ PAP+ +LDEVDA
Sbjct: 1025 VESDDPLDAGLEIMCQPPGKKLSTLSLLSGGEQTLTAMALIFAVFLANPAPICVLDEVDA 1084
Query: 206 ALDLSHTQNIGQMLKRHFKTS--QFIIVS 232
LD ++ +L + + +F+I++
Sbjct: 1085 PLDDANVTRFCDLLDEMCRQTDTRFLIIT 1113
Score = 36 (17.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 15 EQRDKLERTVDKKAQLSLRNE 35
EQ ++LE + AQ+S R E
Sbjct: 634 EQLNRLEALKQELAQVSARAE 654
Score = 36 (17.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAP 48
EVT+ L R +LE + A+L R ++ ++G ++ P
Sbjct: 787 EVTKD---LSGWRHRLETAGKRIAELEERKAASEEELGEAMQVP 827
Score = 36 (17.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKV-GAMVKA 47
+VT +L + +R V+ + R+E + + GA+ +A
Sbjct: 386 QVTEDVARLAARHQSAQRLVEDSRKTLARSEAEETRARGAVEEA 429
>TIGR_CMR|SPO_3228 [details] [associations]
symbol:SPO_3228 "SMC protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0003824 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K03529
RefSeq:YP_168431.1 ProteinModelPortal:Q5LNH7 GeneID:3194939
KEGG:sil:SPO3228 PATRIC:23379903 HOGENOM:HOG000036390 OMA:AHERVQA
ProtClustDB:CLSK864767 Uniprot:Q5LNH7
Length = 1151
Score = 134 (52.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 43/149 (28%), Positives = 72/149 (48%)
Query: 88 EAMTK-KSIVESDRAKLLKVIEELDEKKKIALREAWLKVNTDFGSIFSLLLPGSQAKLSP 146
++++K KS +E L I L+ + + L A+ +VN++F +F L G +A L
Sbjct: 965 DSLSKEKSDLEEAVKTLRSGIASLNREGRERLLTAFEQVNSNFAMLFRHLFGGGEANLVM 1024
Query: 147 PAGKDILD-GLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDA 205
D LD GLE+ G +L LSGG++ PAP+ +LDEVDA
Sbjct: 1025 VESDDPLDAGLEIMCQPPGKKLSTLSLLSGGEQTLTAMALIFAVFLANPAPICVLDEVDA 1084
Query: 206 ALDLSHTQNIGQMLKRHFKTS--QFIIVS 232
LD ++ +L + + +F+I++
Sbjct: 1085 PLDDANVTRFCDLLDEMCRQTDTRFLIIT 1113
Score = 36 (17.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 15 EQRDKLERTVDKKAQLSLRNE 35
EQ ++LE + AQ+S R E
Sbjct: 634 EQLNRLEALKQELAQVSARAE 654
Score = 36 (17.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAP 48
EVT+ L R +LE + A+L R ++ ++G ++ P
Sbjct: 787 EVTKD---LSGWRHRLETAGKRIAELEERKAASEEELGEAMQVP 827
Score = 36 (17.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 5 EVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKV-GAMVKA 47
+VT +L + +R V+ + R+E + + GA+ +A
Sbjct: 386 QVTEDVARLAARHQSAQRLVEDSRKTLARSEAEETRARGAVEEA 429
>WB|WBGene00001860 [details] [associations]
symbol:him-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0010165 "response to X-ray" evidence=IMP]
[GO:0009411 "response to UV" evidence=IMP] [GO:0008278 "cohesin
complex" evidence=ISS;IPI] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0009411 GO:GO:0002119 GO:GO:0003677
GO:GO:0006281 GO:GO:0040011 GO:GO:0000790 GO:GO:0006310
GO:GO:0040035 GO:GO:0030261 GO:GO:0010165 GO:GO:0007064
GO:GO:0008278 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
KO:K06636 OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:FO081198
RefSeq:NP_001040658.2 UniGene:Cel.5375 ProteinModelPortal:O01789
SMR:O01789 STRING:O01789 PaxDb:O01789 EnsemblMetazoa:F28B3.7a.1
EnsemblMetazoa:F28B3.7a.2 GeneID:172116 KEGG:cel:CELE_F28B3.7
UCSC:F28B3.7a.1 CTD:172116 WormBase:F28B3.7a InParanoid:O01789
NextBio:874073 ArrayExpress:O01789 Uniprot:O01789
Length = 1262
Score = 122 (48.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 27/91 (29%), Positives = 45/91 (49%)
Query: 153 LDGLEVNVAFGGLWKESLGELSGGQRXXXXXXXXXXXXXFKPAPLYILDEVDAALDLSHT 212
LDG++ N G + LSGG++ PAP ++LDE+DAALD ++
Sbjct: 1128 LDGIQYNCVAPGKRFRPMDNLSGGEKTIAALALLFAVHGRNPAPFFVLDEIDAALDNTNI 1187
Query: 213 QNIGQMLKRHFKTS-QFIIVSLKEGMFSNAN 242
+ + + Q I++SLKE ++ A+
Sbjct: 1188 GKVASYICESAREHMQIIVISLKEEFYNKAD 1218
Score = 42 (19.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 30/120 (25%), Positives = 56/120 (46%)
Query: 4 HEVTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGS 63
HE +Y++LK + K E D + ++ R Q K A ++ + + +MK L +
Sbjct: 174 HEFQAEYERLKVEMTKAED--DTQHNMNKRRGIAQEKREAKMEKD-EAEKYQTMKNELAA 230
Query: 64 MSSFSVKVGAMVKAPLRTLLFISMEAMT-KKSI--VESDRAKLLKVIEELDEKKKIALRE 120
S+ + + + RT+ E KK+I +E+ R+K I + ++ + ALRE
Sbjct: 231 KSTM-LFLHQLFHCE-RTIDESKEEINAQKKTIASLEATRSKEEAKIAAVHQEHRKALRE 288
Score = 41 (19.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 7 TRKYQKLKEQRDKLERTVDK-KAQLSLRNEENQFKVGA 43
T +Y++ ++ D + T+D QLS RN Q +GA
Sbjct: 1084 TDRYRRFQDFFDPVANTIDDIYKQLS-RNTSAQAFLGA 1120
Score = 41 (19.5 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 88 EAMTK-KSIVESDRAKLLKVIEELDEKKKIA 117
E+M + K ++E +A K+ E +E KKIA
Sbjct: 882 ESMEQDKEVLEEKKALSHKLETEWNEVKKIA 912
Score = 36 (17.7 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 14/61 (22%), Positives = 26/61 (42%)
Query: 6 VTRKYQKLKEQRDKLERTVDKKAQLSLRNEENQFKVGAMVKAPLKTLLFISMKKYLGSMS 65
V ++++K + K+ R +D+K ++N + V K L KK L +
Sbjct: 278 VHQEHRKALREVQKMTRKLDQKETDLAEKQQNMLTLKVSVAHEHKKLEIA--KKMLAAAE 335
Query: 66 S 66
S
Sbjct: 336 S 336
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 264 251 0.00081 114 3 11 22 0.46 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 114
No. of states in DFA: 567 (60 KB)
Total size of DFA: 152 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.60u 0.11s 23.71t Elapsed: 00:00:11
Total cpu time: 23.63u 0.11s 23.74t Elapsed: 00:00:11
Start: Thu Aug 15 15:05:29 2013 End: Thu Aug 15 15:05:40 2013
WARNINGS ISSUED: 1