Your job contains 1 sequence.
>psy17517
ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHR
IATIRSLGLEDLRSMALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGG
EKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17517
(163 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-090506-9 - symbol:smc1a "structural mainten... 418 7.5e-38 1
UNIPROTKB|O97593 - symbol:SMC1A "Structural maintenance o... 418 7.5e-38 1
UNIPROTKB|E2QV07 - symbol:SMC1A "Structural maintenance o... 418 7.5e-38 1
UNIPROTKB|Q14683 - symbol:SMC1A "Structural maintenance o... 418 7.5e-38 1
UNIPROTKB|F2Z5A8 - symbol:LOC100523938 "Structural mainte... 418 7.5e-38 1
MGI|MGI:1344345 - symbol:Smc1a "structural maintenance of... 418 7.5e-38 1
RGD|61991 - symbol:Smc1a "structural maintenance of chrom... 418 7.5e-38 1
UNIPROTKB|Q9Z1M9 - symbol:Smc1a "Structural maintenance o... 418 7.5e-38 1
ZFIN|ZDB-GENE-040426-57 - symbol:smc1al "structural maint... 418 7.5e-38 1
UNIPROTKB|I3LMC6 - symbol:LOC100523938 "Structural mainte... 418 7.5e-38 1
UNIPROTKB|O93308 - symbol:smc1a "Structural maintenance o... 415 1.6e-37 1
FB|FBgn0040283 - symbol:SMC1 "SMC1" species:7227 "Drosoph... 412 3.3e-37 1
UNIPROTKB|F1N6C8 - symbol:SMC1B "Structural maintenance o... 392 6.4e-37 2
UNIPROTKB|G3X7C0 - symbol:SMC1A "Structural maintenance o... 403 3.0e-36 1
MGI|MGI:2154049 - symbol:Smc1b "structural maintenance of... 390 9.6e-36 2
RGD|1308791 - symbol:Smc1b "structural maintenance of chr... 386 2.5e-35 2
UNIPROTKB|F6V533 - symbol:SMC1B "Uncharacterized protein"... 392 3.5e-35 1
UNIPROTKB|F1SM58 - symbol:F1SM58 "Structural maintenance ... 392 4.5e-35 1
UNIPROTKB|Q8NDV3 - symbol:SMC1B "Structural maintenance o... 392 4.5e-35 1
UNIPROTKB|E2QRT5 - symbol:SMC1B "Structural maintenance o... 392 4.5e-35 1
WB|WBGene00001860 - symbol:him-1 species:6239 "Caenorhabd... 378 1.5e-33 1
UNIPROTKB|F1NX72 - symbol:SMC1B "Structural maintenance o... 369 1.3e-32 1
UNIPROTKB|F1NX73 - symbol:SMC1B "Structural maintenance o... 369 1.3e-32 1
ASPGD|ASPL0000036762 - symbol:AN2963 species:162425 "Emer... 290 3.6e-24 1
CGD|CAL0001080 - symbol:SMC1 species:5476 "Candida albica... 264 1.1e-22 2
POMBASE|SPBC29A10.04 - symbol:psm1 "mitotic cohesin compl... 269 6.0e-22 1
SGD|S000001886 - symbol:SMC1 "Subunit of the multiprotein... 249 8.1e-20 1
DICTYBASE|DDB_G0291752 - symbol:smc1 "structural maintena... 213 6.4e-16 1
WB|WBGene00004874 - symbol:smc-4 species:6239 "Caenorhabd... 188 8.4e-16 2
UNIPROTKB|Q20060 - symbol:smc-4 "Structural maintenance o... 188 8.4e-16 2
ASPGD|ASPL0000075987 - symbol:AN4597 species:162425 "Emer... 199 1.2e-15 2
SGD|S000004076 - symbol:SMC4 "Subunit of the condensin co... 207 2.9e-15 1
POMBASE|SPBC146.03c - symbol:cut3 "condensin complex subu... 201 1.2e-14 1
CGD|CAL0003745 - symbol:SMC4 species:5476 "Candida albica... 200 1.6e-14 1
FB|FBgn0015391 - symbol:glu "gluon" species:7227 "Drosoph... 192 1.1e-13 1
DICTYBASE|DDB_G0286403 - symbol:smc4 "structural maintena... 192 1.2e-13 1
UNIPROTKB|F1NN18 - symbol:SMC4 "Uncharacterized protein" ... 185 2.0e-13 1
UNIPROTKB|E1BMZ9 - symbol:SMC4 "Structural maintenance of... 187 3.5e-13 1
UNIPROTKB|F1SH51 - symbol:SMC4 "Structural maintenance of... 186 4.5e-13 1
UNIPROTKB|Q9ERA5 - symbol:SMC4 "Structural maintenance of... 185 5.5e-13 1
UNIPROTKB|E9PD53 - symbol:SMC4 "Structural maintenance of... 185 5.6e-13 1
UNIPROTKB|F1NDN4 - symbol:SMC4 "Structural maintenance of... 185 5.6e-13 1
MGI|MGI:1917349 - symbol:Smc4 "structural maintenance of ... 185 5.7e-13 1
UNIPROTKB|F1MAD9 - symbol:Smc4 "Structural maintenance of... 185 5.7e-13 1
UNIPROTKB|E2RCX4 - symbol:SMC4 "Structural maintenance of... 185 5.7e-13 1
UNIPROTKB|Q9NTJ3 - symbol:SMC4 "Structural maintenance of... 185 5.7e-13 1
UNIPROTKB|P50532 - symbol:smc4 "Structural maintenance of... 185 5.7e-13 1
UNIPROTKB|F1P3C6 - symbol:SMC4 "Structural maintenance of... 185 5.8e-13 1
ZFIN|ZDB-GENE-020419-21 - symbol:smc4 "structural mainten... 182 1.2e-12 1
WB|WBGene00001086 - symbol:dpy-27 species:6239 "Caenorhab... 179 2.9e-12 1
UNIPROTKB|P48996 - symbol:dpy-27 "Chromosome condensation... 179 2.9e-12 1
TIGR_CMR|CHY_1443 - symbol:CHY_1443 "chromosome segregati... 175 6.0e-12 1
TIGR_CMR|BA_3986 - symbol:BA_3986 "chromosome segregation... 170 2.0e-11 1
UNIPROTKB|Q10970 - symbol:smc "Chromosome partition prote... 152 1.6e-10 2
UNIPROTKB|P51834 - symbol:smc "Chromosome partition prote... 161 1.9e-10 1
TIGR_CMR|GSU_1130 - symbol:GSU_1130 "chromosome segregati... 160 2.4e-10 1
UNIPROTKB|F1SP73 - symbol:F1SP73 "Uncharacterized protein... 135 2.5e-10 2
UNIPROTKB|F1SRP0 - symbol:SMC2 "Structural maintenance of... 135 2.6e-10 2
UNIPROTKB|E2R7R8 - symbol:SMC2 "Structural maintenance of... 135 2.6e-10 2
MGI|MGI:106067 - symbol:Smc2 "structural maintenance of c... 135 2.6e-10 2
UNIPROTKB|D4A5Q2 - symbol:Smc2 "Structural maintenance of... 135 2.6e-10 2
UNIPROTKB|O95347 - symbol:SMC2 "Structural maintenance of... 135 2.6e-10 2
RGD|1305227 - symbol:Smc2 "structural maintenance of chro... 135 2.8e-10 2
GENEDB_PFALCIPARUM|PF11_0317 - symbol:PF11_0317 "structur... 161 3.1e-10 1
UNIPROTKB|Q8II57 - symbol:PF11_0317 "Structural maintenan... 161 3.1e-10 1
UNIPROTKB|Q5LNH7 - symbol:smc "Chromosome partition prote... 158 3.7e-10 1
TIGR_CMR|SPO_3228 - symbol:SPO_3228 "SMC protein" species... 158 3.7e-10 1
UNIPROTKB|E1C614 - symbol:E1C614 "Uncharacterized protein... 135 3.8e-10 2
UNIPROTKB|E1C610 - symbol:E1C610 "Structural maintenance ... 135 4.0e-10 2
UNIPROTKB|E1C612 - symbol:E1C612 "Uncharacterized protein... 135 4.0e-10 2
POMBASE|SPBP4H10.06c - symbol:cut14 "condensin complex su... 130 4.0e-10 2
UNIPROTKB|Q90988 - symbol:SMC2 "Structural maintenance of... 135 4.1e-10 2
UNIPROTKB|E1C782 - symbol:E1C782 "Uncharacterized protein... 135 4.1e-10 2
UNIPROTKB|E1C611 - symbol:E1C611 "Structural maintenance ... 135 4.2e-10 2
UNIPROTKB|F1MY41 - symbol:SMC2 "Structural maintenance of... 133 4.2e-10 2
UNIPROTKB|Q71YL3 - symbol:smC "Chromosome partition prote... 157 5.0e-10 1
ASPGD|ASPL0000004872 - symbol:smcB species:162425 "Emeric... 129 6.6e-10 2
ZFIN|ZDB-GENE-030131-105 - symbol:smc2 "structural mainte... 130 1.2e-09 2
UNIPROTKB|Q97QG7 - symbol:smc "Chromosome partition prote... 152 1.7e-09 1
UNIPROTKB|Q81ZL2 - symbol:smc "Chromosome partition prote... 150 2.7e-09 1
TIGR_CMR|CBU_0540 - symbol:CBU_0540 "SMC family protein" ... 150 2.7e-09 1
TIGR_CMR|SO_2898 - symbol:SO_2898 "SMC family protein" sp... 145 9.0e-09 1
UNIPROTKB|Q9X0R4 - symbol:smc "Chromosome partition prote... 143 1.5e-08 1
TAIR|locus:2045159 - symbol:TTN7 "AT2G27170" species:3702... 141 2.6e-08 1
FB|FBgn0027783 - symbol:SMC2 "SMC2" species:7227 "Drosoph... 120 4.9e-08 2
DICTYBASE|DDB_G0276101 - symbol:smc3 "structural maintena... 138 6.6e-08 1
TAIR|locus:2079107 - symbol:ATSMC2 "AT3G47460" species:37... 126 7.6e-08 2
TAIR|locus:2167973 - symbol:SMC2 "AT5G62410" species:3702... 135 1.1e-07 1
UNIPROTKB|O97594 - symbol:SMC3 "Structural maintenance of... 135 1.1e-07 1
WB|WBGene00004873 - symbol:smc-3 species:6239 "Caenorhabd... 134 1.5e-07 1
UNIPROTKB|F2Z5G2 - symbol:SMC3 "Uncharacterized protein" ... 130 2.8e-07 1
SGD|S000001927 - symbol:SMC2 "Subunit of the condensin co... 116 3.3e-07 2
CGD|CAL0000340 - symbol:SMC2 species:5476 "Candida albica... 116 3.4e-07 2
RGD|62006 - symbol:Smc3 "structural maintenance of chromo... 130 3.8e-07 1
UNIPROTKB|P97690 - symbol:Smc3 "Structural maintenance of... 130 3.8e-07 1
UNIPROTKB|O93309 - symbol:smc3 "Structural maintenance of... 130 3.8e-07 1
UNIPROTKB|G3N365 - symbol:SMC3 "Structural maintenance of... 130 3.9e-07 1
ZFIN|ZDB-GENE-030131-3196 - symbol:smc3 "structural maint... 130 3.9e-07 1
UNIPROTKB|F1NEA6 - symbol:SMC3 "Uncharacterized protein" ... 130 3.9e-07 1
UNIPROTKB|A7Z065 - symbol:SMC3 "Structural maintenance of... 130 3.9e-07 1
WARNING: Descriptions of 14 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-090506-9 [details] [associations]
symbol:smc1a "structural maintenance of chromosomes
1A" species:7955 "Danio rerio" [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-090506-9 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 CTD:8243 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CR354431 IPI:IPI00506664 RefSeq:NP_001155103.1
UniGene:Dr.120420 Ensembl:ENSDART00000078148 GeneID:559665
KEGG:dre:559665 OMA:ERIRHAN NextBio:20883076 Uniprot:E7F0X6
Length = 1232
Score = 418 (152.2 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 79/88 (89%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1146
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1147 YKPAPFFVLDEIDAALDNTNIGKVANYI 1174
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1145
>UNIPROTKB|O97593 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0042770 "signal transduction in
response to DNA damage" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0036033 "mediator
complex binding" evidence=IEA] [GO:0032876 "negative regulation of
DNA endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 GO:GO:0005737 GO:GO:0000776 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030893 EMBL:AF072712 IPI:IPI00687474 PIR:S71602
RefSeq:NP_777039.1 UniGene:Bt.109789 ProteinModelPortal:O97593
STRING:O97593 PRIDE:O97593 GeneID:282370 KEGG:bta:282370 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 InParanoid:O97593 KO:K06636
OrthoDB:EOG4HX507 NextBio:20806162 Uniprot:O97593
Length = 1233
Score = 418 (152.2 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 79/88 (89%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1146
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1147 YKPAPFFVLDEIDAALDNTNIGKVANYI 1174
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1145
>UNIPROTKB|E2QV07 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 CTD:8243 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 EMBL:AAEX03026385 RefSeq:XP_538049.3
Ensembl:ENSCAFT00000025795 GeneID:480928 KEGG:cfa:480928
Uniprot:E2QV07
Length = 1233
Score = 418 (152.2 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 79/88 (89%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1146
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1147 YKPAPFFVLDEIDAALDNTNIGKVANYI 1174
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1145
>UNIPROTKB|Q14683 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0042770
"signal transduction in response to DNA damage" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=IDA] [GO:0009314 "response to radiation"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008280 "cohesin core heterodimer" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=TAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=TAS] [GO:0000776 "kinetochore" evidence=IDA] [GO:0007126
"meiosis" evidence=ISS] [GO:0000070 "mitotic sister chromatid
segregation" evidence=TAS] [GO:0030893 "meiotic cohesin complex"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007091 "metaphase/anaphase transition of mitotic
cell cycle" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_21300
GO:GO:0000776 GO:GO:0051301 GO:GO:0007052 GO:GO:0006281
Reactome:REACT_1675 GO:GO:0003682 GO:GO:0042770
Reactome:REACT_111183 GO:GO:0006310 GO:GO:0000794 GO:GO:0030261
GO:GO:0009314 GO:GO:0003777 GO:GO:0032876 GO:GO:0007091
GO:GO:0000398 GO:GO:0000075 GO:GO:0000236 GO:GO:0000777
GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553 EMBL:Z97054
Orphanet:199 EMBL:AL161779 GO:GO:0030893 GO:GO:0008280 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:S78271 EMBL:D80000 EMBL:BC112127 IPI:IPI00291939 PIR:I54383
RefSeq:NP_006297.2 UniGene:Hs.211602 ProteinModelPortal:Q14683
SMR:Q14683 DIP:DIP-30911N IntAct:Q14683 MINT:MINT-233274
STRING:Q14683 PhosphoSite:Q14683 DMDM:29336622 PaxDb:Q14683
PeptideAtlas:Q14683 PRIDE:Q14683 Ensembl:ENST00000322213
GeneID:8243 KEGG:hsa:8243 UCSC:uc004dsg.3 GeneCards:GC0XM053417
HGNC:HGNC:11111 HPA:CAB025404 HPA:HPA005499 MIM:300040 MIM:300590
neXtProt:NX_Q14683 PharmGKB:PA35961 InParanoid:Q14683 OMA:NALVCET
PhylomeDB:Q14683 ChiTaRS:SMC1A GenomeRNAi:8243 NextBio:31006
ArrayExpress:Q14683 Bgee:Q14683 CleanEx:HS_SMC1A
Genevestigator:Q14683 GermOnline:ENSG00000072501 Uniprot:Q14683
Length = 1233
Score = 418 (152.2 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 79/88 (89%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1146
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1147 YKPAPFFVLDEIDAALDNTNIGKVANYI 1174
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1145
>UNIPROTKB|F2Z5A8 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 EMBL:GACC01000120 RefSeq:XP_003135172.3
Ensembl:ENSSSCT00000013478 GeneID:100523938 KEGG:ssc:100523938
Uniprot:F2Z5A8
Length = 1233
Score = 418 (152.2 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 79/88 (89%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1146
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1147 YKPAPFFVLDEIDAALDNTNIGKVANYI 1174
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1145
>MGI|MGI:1344345 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10090 "Mus musculus" [GO:0000075 "cell cycle checkpoint"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;IDA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=IDA] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=ISO] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:1344345 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0005654 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
GO:GO:0006281 GO:GO:0003682 GO:GO:0042770 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030261 GO:GO:0009314 GO:GO:0032876 GO:GO:0019827
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:AL672180 GO:GO:0036033 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AF047600 EMBL:BC131667 EMBL:AK007334 EMBL:AK013648
EMBL:AK017948 EMBL:AK088183 IPI:IPI00123870 RefSeq:NP_062684.2
UniGene:Mm.482095 PDB:2WD5 PDBsum:2WD5 ProteinModelPortal:Q9CU62
SMR:Q9CU62 DIP:DIP-57021N IntAct:Q9CU62 STRING:Q9CU62
PhosphoSite:Q9CU62 PaxDb:Q9CU62 PRIDE:Q9CU62
Ensembl:ENSMUST00000045312 GeneID:24061 KEGG:mmu:24061
GeneTree:ENSGT00580000081569 InParanoid:A2AFQ5
EvolutionaryTrace:Q9CU62 NextBio:304025 Bgee:Q9CU62
CleanEx:MM_SMC1A Genevestigator:Q9CU62
GermOnline:ENSMUSG00000041133 Uniprot:Q9CU62
Length = 1233
Score = 418 (152.2 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 79/88 (89%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1146
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1147 YKPAPFFVLDEIDAALDNTNIGKVANYI 1174
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1145
>RGD|61991 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10116 "Rattus norvegicus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO;ISS] [GO:0000776 "kinetochore"
evidence=ISO;ISS] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IDA] [GO:0009314 "response to radiation"
evidence=ISO;ISS] [GO:0019827 "stem cell maintenance" evidence=ISO]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 418 (152.2 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 79/88 (89%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1146
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1147 YKPAPFFVLDEIDAALDNTNIGKVANYI 1174
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1145
>UNIPROTKB|Q9Z1M9 [details] [associations]
symbol:Smc1a "Structural maintenance of chromosomes protein
1A" species:10116 "Rattus norvegicus" [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 418 (152.2 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 79/88 (89%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1146
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1147 YKPAPFFVLDEIDAALDNTNIGKVANYI 1174
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1145
>ZFIN|ZDB-GENE-040426-57 [details] [associations]
symbol:smc1al "structural maintenance of chromosomes
1A, like" species:7955 "Danio rerio" [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-040426-57 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
GeneTree:ENSGT00580000081569 EMBL:CR376802 EMBL:CT025883
EMBL:AY648730 IPI:IPI00501499 RefSeq:NP_997975.2 UniGene:Dr.76942
STRING:Q6DRM9 Ensembl:ENSDART00000081016 GeneID:403060
KEGG:dre:403060 CTD:403060 InParanoid:Q6DRM9 OMA:NIGEVAN
NextBio:20816857 Uniprot:Q6DRM9
Length = 1233
Score = 418 (152.2 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 79/88 (89%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1088 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1147
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1148 YKPAPFFVLDEIDAALDNTNIGKVANYI 1175
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1088 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1146
>UNIPROTKB|I3LMC6 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 OMA:NALVCET GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 Ensembl:ENSSSCT00000028659
Uniprot:I3LMC6
Length = 1235
Score = 418 (152.2 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 79/88 (89%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1089 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1148
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1149 YKPAPFFVLDEIDAALDNTNIGKVANYI 1176
Score = 279 (103.3 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1089 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1147
>UNIPROTKB|O93308 [details] [associations]
symbol:smc1a "Structural maintenance of chromosomes protein
1A" species:8355 "Xenopus laevis" [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0030893 "meiotic cohesin
complex" evidence=ISS] [GO:0042770 "signal transduction in response
to DNA damage" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039593 EMBL:AF051784
RefSeq:NP_001165905.1 UniGene:Xl.4734 ProteinModelPortal:O93308
IntAct:O93308 GeneID:100379087 KEGG:xla:100379087 CTD:100379087
Uniprot:O93308
Length = 1232
Score = 415 (151.1 bits), Expect = 1.6e-37, P = 1.6e-37
Identities = 78/88 (88%), Positives = 84/88 (95%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIHS
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIHS 1146
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y P+PFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1147 YKPSPFFVLDEIDAALDNTNIGKVANYI 1174
Score = 279 (103.3 bits), Expect = 5.1e-23, P = 5.1e-23
Identities = 52/59 (88%), Positives = 56/59 (94%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSGGEKTVAALALLFAIH
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALLFAIH 1145
>FB|FBgn0040283 [details] [associations]
symbol:SMC1 "SMC1" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0008278 "cohesin
complex" evidence=ISS;IDA;NAS] [GO:0007062 "sister chromatid
cohesion" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IGI] [GO:0005694 "chromosome" evidence=IDA] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0016319 "mushroom body
development" evidence=IMP] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0035327 "transcriptionally active chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005700
"polytene chromosome" evidence=IDA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0006281 GO:GO:0016322 GO:GO:0048813 GO:GO:0006310
GO:GO:0016319 GO:GO:0010629 GO:GO:0030261 GO:GO:0005700
GO:GO:0035327 GO:GO:0008278 GO:GO:0007062 SUPFAM:SSF75553
HSSP:Q9X0R4 EMBL:AF225909 EMBL:AJ271845 STRING:Q9N6I4
FlyBase:FBgn0040283 InParanoid:Q9N6I4 OrthoDB:EOG4QNKB0
Uniprot:Q9N6I4
Length = 1238
Score = 412 (150.1 bits), Expect = 3.3e-37, P = 3.3e-37
Identities = 74/87 (85%), Positives = 84/87 (96%)
Query: 77 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSY 136
LA+N++AQA++GP+NPEEPYL G+NYNCVAPGKRFQPM NLSGGEKT+AALALLF+ HS+
Sbjct: 1101 LARNEAAQAYIGPDNPEEPYLDGINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTHSF 1160
Query: 137 HPAPFFVLDEIDAALDNTNIGKVASYI 163
HPAPFFVLDEIDAALDNTNIGKVASYI
Sbjct: 1161 HPAPFFVLDEIDAALDNTNIGKVASYI 1187
Score = 265 (98.3 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 46/58 (79%), Positives = 55/58 (94%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
LA+N++AQA++GP+NPEEPYL G+NYNCVAPGKRFQPM NLSGGEKT+AALALLF+ H
Sbjct: 1101 LARNEAAQAYIGPDNPEEPYLDGINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTH 1158
>UNIPROTKB|F1N6C8 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:DAAA02014929
EMBL:DAAA02014930 IPI:IPI00697785 ProteinModelPortal:F1N6C8
PRIDE:F1N6C8 Ensembl:ENSBTAT00000014005 Uniprot:F1N6C8
Length = 1235
Score = 392 (143.0 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 72/87 (82%), Positives = 80/87 (91%)
Query: 77 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSY 136
L +N SAQAFL PENPEEPYL+G++YNCVAPGKRF PM NLSGGEK VAALALLFA+HS+
Sbjct: 1090 LCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSF 1149
Query: 137 HPAPFFVLDEIDAALDNTNIGKVASYI 163
PAPFFVLDE+DAALDNTNIGKV+SYI
Sbjct: 1150 RPAPFFVLDEVDAALDNTNIGKVSSYI 1176
Score = 257 (95.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 47/58 (81%), Positives = 52/58 (89%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
L +N SAQAFL PENPEEPYL+G++YNCVAPGKRF PM NLSGGEK VAALALLFA+H
Sbjct: 1090 LCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVH 1147
Score = 46 (21.3 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 30 VAPGKRFQPMTNLSGGEKTVAALALLFAI-HRIATIRSLGLEDL 72
+ P KRF + +G K+ AL F + +IA +R +++L
Sbjct: 21 IGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKNIQEL 64
>UNIPROTKB|G3X7C0 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042770 "signal transduction in response to DNA
damage" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0009314 "response to radiation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0000075
"cell cycle checkpoint" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000776 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:DAAA02073280
EMBL:DAAA02073281 Ensembl:ENSBTAT00000023619 Uniprot:G3X7C0
Length = 1232
Score = 403 (146.9 bits), Expect = 3.0e-36, P = 3.0e-36
Identities = 78/88 (88%), Positives = 83/88 (94%)
Query: 76 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHS 135
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSG EKTVAALALLFAIHS
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSG-EKTVAALALLFAIHS 1145
Query: 136 YHPAPFFVLDEIDAALDNTNIGKVASYI 163
Y PAPFFVLDEIDAALDNTNIGKVA+YI
Sbjct: 1146 YKPAPFFVLDEIDAALDNTNIGKVANYI 1173
Score = 264 (98.0 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 51/59 (86%), Positives = 55/59 (93%)
Query: 1 ALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
AL++N SAQAFLGPENPEEPYL G+NYNCVAPGKRF+PM NLSG EKTVAALALLFAIH
Sbjct: 1087 ALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSG-EKTVAALALLFAIH 1144
>MGI|MGI:2154049 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=IDA]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IDA] [GO:0007126 "meiosis"
evidence=IPI] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030893 "meiotic cohesin complex" evidence=ISO;IDA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IDA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:2154049 GO:GO:0005524
GO:GO:0007126 GO:GO:0005654 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0034991
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK EMBL:AF303827
IPI:IPI00120490 RefSeq:NP_536718.1 UniGene:Mm.182737
ProteinModelPortal:Q920F6 SMR:Q920F6 STRING:Q920F6
PhosphoSite:Q920F6 PaxDb:Q920F6 PRIDE:Q920F6
Ensembl:ENSMUST00000023068 GeneID:140557 KEGG:mmu:140557
InParanoid:Q920F6 OrthoDB:EOG4RNB7M NextBio:369861 Bgee:Q920F6
CleanEx:MM_SMC1B Genevestigator:Q920F6
GermOnline:ENSMUSG00000022432 Uniprot:Q920F6
Length = 1248
Score = 390 (142.3 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 72/87 (82%), Positives = 79/87 (90%)
Query: 77 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSY 136
L +N SAQAFL PENPEEPYL G++YNCVAPGKRF PM NLSGGEK VAALALLFA+HS+
Sbjct: 1083 LCRNNSAQAFLSPENPEEPYLDGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSF 1142
Query: 137 HPAPFFVLDEIDAALDNTNIGKVASYI 163
PAPFFVLDE+DAALDNTNIGKV+SYI
Sbjct: 1143 RPAPFFVLDEVDAALDNTNIGKVSSYI 1169
Score = 255 (94.8 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 47/58 (81%), Positives = 51/58 (87%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
L +N SAQAFL PENPEEPYL G++YNCVAPGKRF PM NLSGGEK VAALALLFA+H
Sbjct: 1083 LCRNNSAQAFLSPENPEEPYLDGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVH 1140
Score = 37 (18.1 bits), Expect = 9.6e-36, Sum P(2) = 9.6e-36
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 30 VAPGKRFQPMTNLSGGEKTVAALALLFAI-HRIATIRSLGLEDL 72
+ P KRF + +G K+ AL F + + +R +++L
Sbjct: 21 IGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKTTNLRVKNIQEL 64
>RGD|1308791 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10116 "Rattus norvegicus" [GO:0000775 "chromosome,
centromeric region" evidence=IEA;ISO] [GO:0000795 "synaptonemal
complex" evidence=ISO] [GO:0000800 "lateral element"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=IEA;ISO] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030893 "meiotic cohesin complex"
evidence=ISO] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA;ISO] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:1308791 GO:GO:0005524 GO:GO:0007126 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0000800 EMBL:CH473950 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 KO:K06636 GeneTree:ENSGT00580000081569 CTD:27127
OMA:QLYHNEK OrthoDB:EOG4RNB7M IPI:IPI00372956 RefSeq:NP_001123970.1
UniGene:Rn.56972 Ensembl:ENSRNOT00000044883 GeneID:300121
KEGG:rno:300121 NextBio:646377 Uniprot:D3ZE73
Length = 1247
Score = 386 (140.9 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 71/87 (81%), Positives = 78/87 (89%)
Query: 77 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSY 136
L +N SAQAFL PENPEEPYL G++YNCVAPGKRF PM NLSGGEK VAALALLFA+HS+
Sbjct: 1083 LCRNNSAQAFLSPENPEEPYLDGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSF 1142
Query: 137 HPAPFFVLDEIDAALDNTNIGKVASYI 163
PAPFFVLDE+DAALDNTNIGKV+ YI
Sbjct: 1143 RPAPFFVLDEVDAALDNTNIGKVSGYI 1169
Score = 255 (94.8 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 47/58 (81%), Positives = 51/58 (87%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
L +N SAQAFL PENPEEPYL G++YNCVAPGKRF PM NLSGGEK VAALALLFA+H
Sbjct: 1083 LCRNNSAQAFLSPENPEEPYLDGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVH 1140
Score = 37 (18.1 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 30 VAPGKRFQPMTNLSGGEKTVAALALLFAI-HRIATIRSLGLEDL 72
+ P KRF + +G K+ AL F + + +R +++L
Sbjct: 21 IGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKTTNLRVKNIQEL 64
>UNIPROTKB|F6V533 [details] [associations]
symbol:SMC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AAEX03007228
EMBL:AAEX03007229 EMBL:AAEX03007230 Ensembl:ENSCAFT00000001296
Uniprot:F6V533
Length = 1079
Score = 392 (143.0 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 73/98 (74%), Positives = 86/98 (87%)
Query: 66 SLGLEDLRSMALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVA 125
S+ ++++ L +N SAQAFL PENPEEPYL+G++YNCVAPGKRF PM NLSGGEK VA
Sbjct: 913 SISIDEIYKK-LCRNVSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVA 971
Query: 126 ALALLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI 163
ALALLFA+HS+ PAPFFVLDE+DAALDNTNIGKV+SYI
Sbjct: 972 ALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYI 1009
Score = 255 (94.8 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 47/58 (81%), Positives = 52/58 (89%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
L +N SAQAFL PENPEEPYL+G++YNCVAPGKRF PM NLSGGEK VAALALLFA+H
Sbjct: 923 LCRNVSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVH 980
>UNIPROTKB|F1SM58 [details] [associations]
symbol:F1SM58 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR024704 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005634 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 GeneTree:ENSGT00580000081569
EMBL:CU856016 EMBL:CU633534 Ensembl:ENSSSCT00000000014
Uniprot:F1SM58
Length = 1233
Score = 392 (143.0 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 72/87 (82%), Positives = 80/87 (91%)
Query: 77 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSY 136
L +N SAQAFL PENPEEPYL+G++YNCVAPGKRF PM NLSGGEK VAALALLFA+HS+
Sbjct: 1082 LCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSF 1141
Query: 137 HPAPFFVLDEIDAALDNTNIGKVASYI 163
PAPFFVLDE+DAALDNTNIGKV+SYI
Sbjct: 1142 RPAPFFVLDEVDAALDNTNIGKVSSYI 1168
Score = 257 (95.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 47/58 (81%), Positives = 52/58 (89%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
L +N SAQAFL PENPEEPYL+G++YNCVAPGKRF PM NLSGGEK VAALALLFA+H
Sbjct: 1082 LCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVH 1139
>UNIPROTKB|Q8NDV3 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes protein
1B" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IDA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 Reactome:REACT_115566 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 Reactome:REACT_111183 GO:GO:0006310
GO:GO:0030261 GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196
SUPFAM:SSF75553 EMBL:AL008718 EMBL:AL021391 GO:GO:0030893
HOVERGEN:HBG039593 KO:K06636 EMBL:AJ504806 EMBL:BC126208
EMBL:AK125736 IPI:IPI00479260 IPI:IPI00807400 IPI:IPI00893258
RefSeq:NP_683515.3 UniGene:Hs.334176 ProteinModelPortal:Q8NDV3
SMR:Q8NDV3 STRING:Q8NDV3 PhosphoSite:Q8NDV3 DMDM:57015410
PaxDb:Q8NDV3 PRIDE:Q8NDV3 Ensembl:ENST00000357450
Ensembl:ENST00000404354 GeneID:27127 KEGG:hsa:27127 UCSC:uc003bgc.3
UCSC:uc003bgd.3 CTD:27127 GeneCards:GC22M045739 H-InvDB:HIX0027884
HGNC:HGNC:11112 HPA:HPA001500 MIM:608685 neXtProt:NX_Q8NDV3
PharmGKB:PA35962 OMA:QLYHNEK GenomeRNAi:27127 NextBio:49836
Bgee:Q8NDV3 CleanEx:HS_SMC1B Genevestigator:Q8NDV3
GermOnline:ENSG00000077935 Uniprot:Q8NDV3
Length = 1235
Score = 392 (143.0 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 72/87 (82%), Positives = 80/87 (91%)
Query: 77 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSY 136
L +N SAQAFL PENPEEPYL+G++YNCVAPGKRF PM NLSGGEK VAALALLFA+HS+
Sbjct: 1084 LCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVHSF 1143
Query: 137 HPAPFFVLDEIDAALDNTNIGKVASYI 163
PAPFFVLDE+DAALDNTNIGKV+SYI
Sbjct: 1144 RPAPFFVLDEVDAALDNTNIGKVSSYI 1170
Score = 257 (95.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 47/58 (81%), Positives = 52/58 (89%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
L +N SAQAFL PENPEEPYL+G++YNCVAPGKRF PM NLSGGEK VAALALLFA+H
Sbjct: 1084 LCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVH 1141
>UNIPROTKB|E2QRT5 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK
EMBL:AAEX03007228 EMBL:AAEX03007229 EMBL:AAEX03007230
RefSeq:XP_538328.2 Ensembl:ENSCAFT00000001296
Ensembl:ENSCAFT00000049571 GeneID:481207 KEGG:cfa:481207
NextBio:20856062 Uniprot:E2QRT5
Length = 1235
Score = 392 (143.0 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 73/98 (74%), Positives = 86/98 (87%)
Query: 66 SLGLEDLRSMALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVA 125
S+ ++++ L +N SAQAFL PENPEEPYL+G++YNCVAPGKRF PM NLSGGEK VA
Sbjct: 1074 SISIDEIYKK-LCRNVSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVA 1132
Query: 126 ALALLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI 163
ALALLFA+HS+ PAPFFVLDE+DAALDNTNIGKV+SYI
Sbjct: 1133 ALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYI 1170
Score = 255 (94.8 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 47/58 (81%), Positives = 52/58 (89%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
L +N SAQAFL PENPEEPYL+G++YNCVAPGKRF PM NLSGGEK VAALALLFA+H
Sbjct: 1084 LCRNVSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAVH 1141
>WB|WBGene00001860 [details] [associations]
symbol:him-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0010165 "response to X-ray" evidence=IMP]
[GO:0009411 "response to UV" evidence=IMP] [GO:0008278 "cohesin
complex" evidence=ISS;IPI] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0009411 GO:GO:0002119 GO:GO:0003677
GO:GO:0006281 GO:GO:0040011 GO:GO:0000790 GO:GO:0006310
GO:GO:0040035 GO:GO:0030261 GO:GO:0010165 GO:GO:0007064
GO:GO:0008278 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
KO:K06636 OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:FO081198
RefSeq:NP_001040658.2 UniGene:Cel.5375 ProteinModelPortal:O01789
SMR:O01789 STRING:O01789 PaxDb:O01789 EnsemblMetazoa:F28B3.7a.1
EnsemblMetazoa:F28B3.7a.2 GeneID:172116 KEGG:cel:CELE_F28B3.7
UCSC:F28B3.7a.1 CTD:172116 WormBase:F28B3.7a InParanoid:O01789
NextBio:874073 ArrayExpress:O01789 Uniprot:O01789
Length = 1262
Score = 378 (138.1 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 72/95 (75%), Positives = 83/95 (87%)
Query: 69 LEDLRSMALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALA 128
++D+ L++N SAQAFLG +N EEPYL G+ YNCVAPGKRF+PM NLSGGEKT+AALA
Sbjct: 1101 IDDIYKQ-LSRNTSAQAFLGADNMEEPYLDGIQYNCVAPGKRFRPMDNLSGGEKTIAALA 1159
Query: 129 LLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI 163
LLFA+H +PAPFFVLDEIDAALDNTNIGKVASYI
Sbjct: 1160 LLFAVHGRNPAPFFVLDEIDAALDNTNIGKVASYI 1194
Score = 246 (91.7 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 45/58 (77%), Positives = 52/58 (89%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
L++N SAQAFLG +N EEPYL G+ YNCVAPGKRF+PM NLSGGEKT+AALALLFA+H
Sbjct: 1108 LSRNTSAQAFLGADNMEEPYLDGIQYNCVAPGKRFRPMDNLSGGEKTIAALALLFAVH 1165
>UNIPROTKB|F1NX72 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AADN02006734
IPI:IPI00577909 Ensembl:ENSGALT00000023006 Uniprot:F1NX72
Length = 1234
Score = 369 (135.0 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 67/87 (77%), Positives = 78/87 (89%)
Query: 77 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSY 136
L +N SAQAFL PENPEEPYL+G+ +NCVAPGKRF PM +LSGGEKTVAALAL+FA+HS+
Sbjct: 1083 LCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALIFAVHSF 1142
Query: 137 HPAPFFVLDEIDAALDNTNIGKVASYI 163
PAPFF+LDEIDAALDNTNI KV+ +I
Sbjct: 1143 RPAPFFILDEIDAALDNTNIDKVSIFI 1169
Score = 251 (93.4 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 45/58 (77%), Positives = 52/58 (89%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
L +N SAQAFL PENPEEPYL+G+ +NCVAPGKRF PM +LSGGEKTVAALAL+FA+H
Sbjct: 1083 LCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALIFAVH 1140
>UNIPROTKB|F1NX73 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:AADN02006734
IPI:IPI00572844 Ensembl:ENSGALT00000023005 Uniprot:F1NX73
Length = 1238
Score = 369 (135.0 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 67/87 (77%), Positives = 78/87 (89%)
Query: 77 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSY 136
L +N SAQAFL PENPEEPYL+G+ +NCVAPGKRF PM +LSGGEKTVAALAL+FA+HS+
Sbjct: 1087 LCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALIFAVHSF 1146
Query: 137 HPAPFFVLDEIDAALDNTNIGKVASYI 163
PAPFF+LDEIDAALDNTNI KV+ +I
Sbjct: 1147 RPAPFFILDEIDAALDNTNIDKVSIFI 1173
Score = 251 (93.4 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 45/58 (77%), Positives = 52/58 (89%)
Query: 2 LAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
L +N SAQAFL PENPEEPYL+G+ +NCVAPGKRF PM +LSGGEKTVAALAL+FA+H
Sbjct: 1087 LCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALIFAVH 1144
>ASPGD|ASPL0000036762 [details] [associations]
symbol:AN2963 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008278 "cohesin
complex" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET OrthoDB:EOG42VCQD
RefSeq:XP_660567.1 ProteinModelPortal:Q5B917 SMR:Q5B917
STRING:Q5B917 EnsemblFungi:CADANIAT00010118 GeneID:2874104
KEGG:ani:AN2963.2 Uniprot:Q5B917
Length = 1261
Score = 290 (107.1 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 53/80 (66%), Positives = 68/80 (85%)
Query: 84 QAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFV 143
QA+L E+ +EPYL G+ Y+ + P KRF+ M +LSGGEKT+AALALLFAIHSY P+PFFV
Sbjct: 1133 QAYLDIEDSDEPYLDGIKYHAMPPLKRFRDMEHLSGGEKTMAALALLFAIHSYQPSPFFV 1192
Query: 144 LDEIDAALDNTNIGKVASYI 163
LDE+DAALDNTN+ ++A+YI
Sbjct: 1193 LDEVDAALDNTNVARIANYI 1212
Score = 165 (63.1 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 9 QAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
QA+L E+ +EPYL G+ Y+ + P KRF+ M +LSGGEKT+AALALLFAIH
Sbjct: 1133 QAYLDIEDSDEPYLDGIKYHAMPPLKRFRDMEHLSGGEKTMAALALLFAIH 1183
>CGD|CAL0001080 [details] [associations]
symbol:SMC1 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0001080
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
EMBL:AACQ01000091 EMBL:AACQ01000090 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06636 RefSeq:XP_715092.1 RefSeq:XP_715143.1
ProteinModelPortal:Q5A021 SMR:Q5A021 STRING:Q5A021 GeneID:3643221
GeneID:3643229 KEGG:cal:CaO19.11845 KEGG:cal:CaO19.4367
Uniprot:Q5A021
Length = 1240
Score = 264 (98.0 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 49/79 (62%), Positives = 63/79 (79%)
Query: 85 AFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVL 144
A+L E+ + P+L G+ Y+ + P KRF+ M LSGGEKT+AALALLFAIHSY P+PFFVL
Sbjct: 1100 AYLTLEDEDSPFLSGIKYHAMPPMKRFRDMELLSGGEKTMAALALLFAIHSYQPSPFFVL 1159
Query: 145 DEIDAALDNTNIGKVASYI 163
DEIDAALDN N+ ++ +YI
Sbjct: 1160 DEIDAALDNANVARIGNYI 1178
Score = 147 (56.8 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 10 AFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
A+L E+ + P+L G+ Y+ + P KRF+ M LSGGEKT+AALALLFAIH
Sbjct: 1100 AYLTLEDEDSPFLSGIKYHAMPPMKRFRDMELLSGGEKTMAALALLFAIH 1149
Score = 40 (19.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 57 AIHRIATIRSLGLEDLRS 74
A HRIA + S+ DL+S
Sbjct: 428 AEHRIAELESIVATDLKS 445
Score = 35 (17.4 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 70 EDLRSMALAQNQS 82
E+LRS LA+N S
Sbjct: 386 EELRSKFLAENGS 398
>POMBASE|SPBC29A10.04 [details] [associations]
symbol:psm1 "mitotic cohesin complex subunit Psm1"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] [GO:0008278 "cohesin complex"
evidence=IDA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030892 "mitotic cohesin complex" evidence=NAS] [GO:0046982
"protein heterodimerization activity" evidence=IPI]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
PomBase:SPBC29A10.04 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR
GO:GO:0006310 GO:GO:0030261 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 GO:GO:0030892 HOGENOM:HOG000195481 PIR:T40059
RefSeq:NP_596049.2 IntAct:O94383 STRING:O94383 PRIDE:O94383
GeneID:2540557 OrthoDB:EOG42VCQD NextBio:20801683 Uniprot:O94383
Length = 1228
Score = 269 (99.8 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 51/79 (64%), Positives = 65/79 (82%)
Query: 85 AFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVL 144
A+L ++ +EPYL G+ ++ + P KRF+ M LSGGEKT+AALALLFAIHSY P+PFFVL
Sbjct: 1100 AYLTLDDLDEPYLGGIKFHAMPPMKRFRDMDQLSGGEKTMAALALLFAIHSYQPSPFFVL 1159
Query: 145 DEIDAALDNTNIGKVASYI 163
DEIDAALD TN+ K+A+YI
Sbjct: 1160 DEIDAALDQTNVTKIANYI 1178
Score = 148 (57.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 10 AFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
A+L ++ +EPYL G+ ++ + P KRF+ M LSGGEKT+AALALLFAIH
Sbjct: 1100 AYLTLDDLDEPYLGGIKFHAMPPMKRFRDMDQLSGGEKTMAALALLFAIH 1149
>SGD|S000001886 [details] [associations]
symbol:SMC1 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0000217 "DNA secondary structure binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0003680 "AT DNA
binding" evidence=IDA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 SGD:S000001886
Pfam:PF02463 GO:GO:0005524 GO:GO:0051301 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0006302
GO:GO:0030261 GO:GO:0003680 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 PDB:1W1W PDBsum:1W1W GO:GO:0034990
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 OrthoDB:EOG42VCQD EMBL:L00602
PIR:A49464 RefSeq:NP_116647.1 ProteinModelPortal:P32908 SMR:P32908
DIP:DIP-2982N IntAct:P32908 MINT:MINT-434606 STRING:P32908
PaxDb:P32908 PeptideAtlas:P32908 EnsemblFungi:YFL008W GeneID:850540
KEGG:sce:YFL008W CYGD:YFL008w EvolutionaryTrace:P32908
NextBio:966301 Genevestigator:P32908 GermOnline:YFL008W
GO:GO:0000217 Uniprot:P32908
Length = 1225
Score = 249 (92.7 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 55/105 (52%), Positives = 70/105 (66%)
Query: 59 HRIATIRSLGLEDLRSMALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLS 118
H A R L ++ LA A L E+ +EP+ G+ Y+ P KRF+ M LS
Sbjct: 1074 HLDAIYRELTKNPNSNVELA---GGNASLTIEDEDEPFNAGIKYHATPPLKRFKDMEYLS 1130
Query: 119 GGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI 163
GGEKTVAALALLFAI+SY P+PFFVLDE+DAALD TN+ ++A+YI
Sbjct: 1131 GGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYI 1175
Score = 134 (52.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 29/50 (58%), Positives = 36/50 (72%)
Query: 10 AFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
A L E+ +EP+ G+ Y+ P KRF+ M LSGGEKTVAALALLFAI+
Sbjct: 1097 ASLTIEDEDEPFNAGIKYHATPPLKRFKDMEYLSGGEKTVAALALLFAIN 1146
>DICTYBASE|DDB_G0291752 [details] [associations]
symbol:smc1 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0042770
"signal transduction in response to DNA damage" evidence=ISS]
[GO:0008280 "cohesin core heterodimer" evidence=ISS] [GO:0007064
"mitotic sister chromatid cohesion" evidence=ISS] [GO:0007052
"mitotic spindle organization" evidence=ISS] [GO:0003777
"microtubule motor activity" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0000075 "cell cycle checkpoint"
evidence=ISS] [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 dictyBase:DDB_G0291752 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GenomeReviews:CM000155_GR GO:GO:0007052
GO:GO:0006281 GO:GO:0003682 EMBL:AAFI02000182 GO:GO:0042770
GO:GO:0006310 GO:GO:0046982 GO:GO:0030261 GO:GO:0003777
GO:GO:0000075 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0008280 KO:K06636 OMA:NALVCET RefSeq:XP_629977.1
ProteinModelPortal:Q54E85 STRING:Q54E85 EnsemblProtists:DDB0219931
GeneID:8628307 KEGG:ddi:DDB_G0291752 InParanoid:Q54E85
Uniprot:Q54E85
Length = 1373
Score = 213 (80.0 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 48/110 (43%), Positives = 65/110 (59%)
Query: 55 LFAIHRIA-TIRSLGLEDLRSMALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQP 113
L A RIA + S+ E R + ++ + A L E+ E P+ GV + + P KRFQ
Sbjct: 1182 LRAFKRIAKNLTSIYSELTRELEPPYHRGS-AHLALEDTENPFNSGVRFTVIPPNKRFQE 1240
Query: 114 MTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI 163
M LSGGEK+VAALA LF+ H PF +LDEIDAA D+ N+ K+ Y+
Sbjct: 1241 MDQLSGGEKSVAALAFLFSTHGLKSTPFMILDEIDAAFDSVNVLKLVRYV 1290
Score = 138 (53.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 10 AFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHRIATIRSLGL 69
A L E+ E P+ GV + + P KRFQ M LSGGEK+VAALA LF+ H + + + L
Sbjct: 1212 AHLALEDTENPFNSGVRFTVIPPNKRFQEMDQLSGGEKSVAALAFLFSTHGLKSTPFMIL 1271
Query: 70 EDL 72
+++
Sbjct: 1272 DEI 1274
>WB|WBGene00004874 [details] [associations]
symbol:smc-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0051301 "cell
division" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0007276
"gamete generation" evidence=IMP] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0000775 GO:GO:0002119
GO:GO:0006281 GO:GO:0000910 GO:GO:0000070 GO:GO:0006310
GO:GO:0040035 GO:GO:0040039 GO:GO:0030261 GO:GO:0000793
GO:GO:0007276 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 EMBL:Z46242
PIR:T21809 RefSeq:NP_497935.1 ProteinModelPortal:Q20060 SMR:Q20060
IntAct:Q20060 STRING:Q20060 PaxDb:Q20060 EnsemblMetazoa:F35G12.8
GeneID:175603 KEGG:cel:CELE_F35G12.8 UCSC:F35G12.8 CTD:175603
WormBase:F35G12.8 HOGENOM:HOG000021360 InParanoid:Q20060
OMA:IAIEFLT NextBio:888868 Uniprot:Q20060
Length = 1549
Score = 188 (71.2 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 34/72 (47%), Positives = 55/72 (76%)
Query: 93 EEPYLQGVNYNCVAPGKR-FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAAL 151
++P+ QG+++ V P K+ ++ + LSGGEKT+++LAL+FA+H + P PF+V+DEIDAAL
Sbjct: 1254 DDPFRQGISF-MVRPAKKAWKQIQFLSGGEKTLSSLALIFALHMFRPTPFYVMDEIDAAL 1312
Query: 152 DNTNIGKVASYI 163
D N+ +A Y+
Sbjct: 1313 DYRNVSIIAQYV 1324
Score = 53 (23.7 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 20 PYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALAL 54
P +GV C G P + +GG KTV L L
Sbjct: 738 PACRGVTV-CTLEGSMIHPSGSFTGGGKTVKGLIL 771
>UNIPROTKB|Q20060 [details] [associations]
symbol:smc-4 "Structural maintenance of chromosomes protein
4" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0000775 GO:GO:0002119
GO:GO:0006281 GO:GO:0000910 GO:GO:0000070 GO:GO:0006310
GO:GO:0040035 GO:GO:0040039 GO:GO:0030261 GO:GO:0000793
GO:GO:0007276 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 EMBL:Z46242
PIR:T21809 RefSeq:NP_497935.1 ProteinModelPortal:Q20060 SMR:Q20060
IntAct:Q20060 STRING:Q20060 PaxDb:Q20060 EnsemblMetazoa:F35G12.8
GeneID:175603 KEGG:cel:CELE_F35G12.8 UCSC:F35G12.8 CTD:175603
WormBase:F35G12.8 HOGENOM:HOG000021360 InParanoid:Q20060
OMA:IAIEFLT NextBio:888868 Uniprot:Q20060
Length = 1549
Score = 188 (71.2 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 34/72 (47%), Positives = 55/72 (76%)
Query: 93 EEPYLQGVNYNCVAPGKR-FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAAL 151
++P+ QG+++ V P K+ ++ + LSGGEKT+++LAL+FA+H + P PF+V+DEIDAAL
Sbjct: 1254 DDPFRQGISF-MVRPAKKAWKQIQFLSGGEKTLSSLALIFALHMFRPTPFYVMDEIDAAL 1312
Query: 152 DNTNIGKVASYI 163
D N+ +A Y+
Sbjct: 1313 DYRNVSIIAQYV 1324
Score = 53 (23.7 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 20 PYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALAL 54
P +GV C G P + +GG KTV L L
Sbjct: 738 PACRGVTV-CTLEGSMIHPSGSFTGGGKTVKGLIL 771
>ASPGD|ASPL0000075987 [details] [associations]
symbol:AN4597 species:162425 "Emericella nidulans"
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006265 "DNA
topological change" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000939
"condensed chromosome inner kinetochore" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:BN001303
EMBL:AACD01000079 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 OrthoDB:EOG4WM82V
RefSeq:XP_662201.1 ProteinModelPortal:Q5B4D3 STRING:Q5B4D3
EnsemblFungi:CADANIAT00005839 GeneID:2872396 KEGG:ani:AN4597.2
Uniprot:Q5B4D3
Length = 1476
Score = 199 (75.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 43/100 (43%), Positives = 68/100 (68%)
Query: 64 IRSLGLEDLRSMALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKT 123
I SL L+++ M + +A+ L + +P+ +G+ ++ + P K ++ + NLSGGEKT
Sbjct: 1304 IISLRLKEMYQM-ITMGGNAELEL--VDSLDPFSEGILFSVMPPKKSWKNIGNLSGGEKT 1360
Query: 124 VAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI 163
+++LAL+FA+H Y P P +V+DEIDAALD N+ VASYI
Sbjct: 1361 LSSLALVFALHHYKPTPLYVMDEIDAALDFRNVSIVASYI 1400
Score = 40 (19.1 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 12 LGPENPEEP 20
LGP PEEP
Sbjct: 230 LGPPKPEEP 238
>SGD|S000004076 [details] [associations]
symbol:SMC4 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0007076 "mitotic chromosome
condensation" evidence=IMP;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IGI;IDA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0000799 "nuclear condensin complex" evidence=TAS;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0070058
"tRNA gene clustering" evidence=IMP] [GO:0032116 "SMC loading
complex" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
SGD:S000004076 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0003682 EMBL:BK006945
GO:GO:0016887 GO:GO:0006310 GO:GO:0007076 EMBL:U53880 GO:GO:0000799
GO:GO:0070058 EMBL:Z73259 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
HOGENOM:HOG000184777 OrthoDB:EOG4WM82V EMBL:Z73258 PIR:S64918
RefSeq:NP_013187.1 ProteinModelPortal:Q12267 SMR:Q12267
DIP:DIP-3007N IntAct:Q12267 MINT:MINT-436885 STRING:Q12267
PaxDb:Q12267 EnsemblFungi:YLR086W GeneID:850775 KEGG:sce:YLR086W
CYGD:YLR086w NextBio:966951 Genevestigator:Q12267
GermOnline:YLR086W Uniprot:Q12267
Length = 1418
Score = 207 (77.9 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 37/70 (52%), Positives = 55/70 (78%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +GV ++ + P K ++ +TNLSGGEKT+++LAL+FA+H Y P P +V+DEIDAALD
Sbjct: 1300 DPFSEGVTFSVMPPKKSWRNITNLSGGEKTLSSLALVFALHKYKPTPLYVMDEIDAALDF 1359
Query: 154 TNIGKVASYI 163
N+ VA+YI
Sbjct: 1360 RNVSIVANYI 1369
Score = 119 (46.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 20/42 (47%), Positives = 35/42 (83%)
Query: 19 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHR 60
+P+ +GV ++ + P K ++ +TNLSGGEKT+++LAL+FA+H+
Sbjct: 1300 DPFSEGVTFSVMPPKKSWRNITNLSGGEKTLSSLALVFALHK 1341
>POMBASE|SPBC146.03c [details] [associations]
symbol:cut3 "condensin complex subunit Cut3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IMP] [GO:0034613
"cellular protein localization" evidence=IMP] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBC146.03c Pfam:PF02463 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0034613 GO:GO:0051301
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 EMBL:D30788
EMBL:AB027959 PIR:S51622 RefSeq:NP_595392.1
ProteinModelPortal:P41004 DIP:DIP-35048N IntAct:P41004
STRING:P41004 EnsemblFungi:SPBC146.03c.1 GeneID:2539817
KEGG:spo:SPBC146.03c OrthoDB:EOG4WM82V NextBio:20800966
Uniprot:P41004
Length = 1324
Score = 201 (75.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 36/70 (51%), Positives = 56/70 (80%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +GV ++ + P K ++ ++NLSGGEKT+++LAL+FA+H+Y P P +V+DEIDAALD
Sbjct: 1207 DPFSEGVLFSVMPPKKSWKNISNLSGGEKTLSSLALVFALHNYKPTPLYVMDEIDAALDF 1266
Query: 154 TNIGKVASYI 163
N+ VA+YI
Sbjct: 1267 KNVSIVANYI 1276
Score = 110 (43.8 bits), Expect = 0.00074, P = 0.00074
Identities = 19/41 (46%), Positives = 34/41 (82%)
Query: 19 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
+P+ +GV ++ + P K ++ ++NLSGGEKT+++LAL+FA+H
Sbjct: 1207 DPFSEGVLFSVMPPKKSWKNISNLSGGEKTLSSLALVFALH 1247
>CGD|CAL0003745 [details] [associations]
symbol:SMC4 species:5476 "Candida albicans" [GO:0032116 "SMC
loading complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000939 "condensed chromosome inner kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000799
"nuclear condensin complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0003745
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:AACQ01000063
EMBL:AACQ01000062 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 RefSeq:XP_716802.1 RefSeq:XP_716862.1
ProteinModelPortal:Q5A4Y2 STRING:Q5A4Y2 GeneID:3641522
GeneID:3641578 KEGG:cal:CaO19.8579 KEGG:cal:CaO19.964
Uniprot:Q5A4Y2
Length = 1368
Score = 200 (75.5 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 41/98 (41%), Positives = 68/98 (69%)
Query: 66 SLGLEDLRSMALAQNQSAQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVA 125
S+ L+D+ M + +A+ L + +P+ +G+ ++ + P K ++ ++NLSGGEKT++
Sbjct: 1228 SMTLKDMYRM-ITMGGNAELEL--VDSLDPFSEGILFSVMPPKKSWKNISNLSGGEKTLS 1284
Query: 126 ALALLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI 163
+LAL+FA+H Y P P +V+DEIDAALD N+ VA+YI
Sbjct: 1285 SLALVFALHKYKPTPLYVMDEIDAALDFRNVSIVANYI 1322
Score = 111 (44.1 bits), Expect = 0.00056, P = 0.00056
Identities = 18/42 (42%), Positives = 35/42 (83%)
Query: 19 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHR 60
+P+ +G+ ++ + P K ++ ++NLSGGEKT+++LAL+FA+H+
Sbjct: 1253 DPFSEGILFSVMPPKKSWKNISNLSGGEKTLSSLALVFALHK 1294
>FB|FBgn0015391 [details] [associations]
symbol:glu "gluon" species:7227 "Drosophila melanogaster"
[GO:0007076 "mitotic chromosome condensation" evidence=ISS;NAS;IMP]
[GO:0000796 "condensin complex" evidence=ISS;NAS;TAS] [GO:0000166
"nucleotide binding" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0007422 "peripheral nervous system development"
evidence=TAS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000785 "chromatin" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0005694 "chromosome"
evidence=IDA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISS;NAS;IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0000819 "sister chromatid segregation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0007052
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 GO:GO:0007422
GO:GO:0000785 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 SUPFAM:SSF75553 HSSP:Q9X0R4 FlyBase:FBgn0015391
EMBL:AF185287 ProteinModelPortal:Q9U6I2 STRING:Q9U6I2 PRIDE:Q9U6I2
InParanoid:Q9U6I2 ArrayExpress:Q9U6I2 Bgee:Q9U6I2 Uniprot:Q9U6I2
Length = 1409
Score = 192 (72.6 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 35/70 (50%), Positives = 52/70 (74%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +GVN+ P K ++ ++NLSGGEKT+++LAL+FA+H Y P+P + +DEIDAALD
Sbjct: 1183 DPFTEGVNFTVRPPKKSWKYISNLSGGEKTLSSLALVFALHYYKPSPLYFMDEIDAALDF 1242
Query: 154 TNIGKVASYI 163
N+ V YI
Sbjct: 1243 KNVSIVGHYI 1252
Score = 114 (45.2 bits), Expect = 0.00018, P = 0.00018
Identities = 20/41 (48%), Positives = 33/41 (80%)
Query: 19 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
+P+ +GVN+ P K ++ ++NLSGGEKT+++LAL+FA+H
Sbjct: 1183 DPFTEGVNFTVRPPKKSWKYISNLSGGEKTLSSLALVFALH 1223
>DICTYBASE|DDB_G0286403 [details] [associations]
symbol:smc4 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0007076 "mitotic chromosome condensation" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000796 "condensin complex" evidence=ISS] [GO:0000070 "mitotic
sister chromatid segregation" evidence=ISS] [GO:0051301 "cell
division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0286403 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0046982 EMBL:AAFI02000085 GO:GO:0007076
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 HSSP:P32908 RefSeq:XP_637730.1
ProteinModelPortal:Q54LV0 STRING:Q54LV0 EnsemblProtists:DDB0219935
GeneID:8625595 KEGG:ddi:DDB_G0286403 OMA:QENFDEN Uniprot:Q54LV0
Length = 1415
Score = 192 (72.6 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 34/71 (47%), Positives = 55/71 (77%)
Query: 93 EEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD 152
E+P+ +G++++ P K ++ ++NLSGGEKT+++LAL+FA+H Y P +V+DEIDAALD
Sbjct: 1266 EDPFQEGISFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHYKPNALYVMDEIDAALD 1325
Query: 153 NTNIGKVASYI 163
N+ +A+YI
Sbjct: 1326 FKNVSIIANYI 1336
Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
Identities = 19/42 (45%), Positives = 35/42 (83%)
Query: 18 EEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIH 59
E+P+ +G++++ P K ++ ++NLSGGEKT+++LAL+FA+H
Sbjct: 1266 EDPFQEGISFSVRPPKKSWKNISNLSGGEKTLSSLALVFALH 1307
>UNIPROTKB|F1NN18 [details] [associations]
symbol:SMC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] InterPro:IPR010935 Pfam:PF06470 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 EMBL:AADN02021066
IPI:IPI00819477 Ensembl:ENSGALT00000039159 ArrayExpress:F1NN18
Uniprot:F1NN18
Length = 609
Score = 185 (70.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 495 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 554
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 555 KNVSIVAFYI 564
Score = 107 (42.7 bits), Expect = 0.00080, P = 0.00080
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 19 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHRIATIRSLGLEDLRSMALA 78
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H ++++ +
Sbjct: 495 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 554
Query: 79 QNQSAQAF 86
+N S AF
Sbjct: 555 KNVSIVAF 562
>UNIPROTKB|E1BMZ9 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:DAAA02002417 EMBL:DAAA02002418 IPI:IPI00703154
Ensembl:ENSBTAT00000007705 ArrayExpress:E1BMZ9 Uniprot:E1BMZ9
Length = 1288
Score = 187 (70.9 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1168 DPFSEGITFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1227
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1228 KNVSIVAFYI 1237
>UNIPROTKB|F1SH51 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:CU466375 RefSeq:XP_001927540.1 UniGene:Ssc.7850
Ensembl:ENSSSCT00000012842 GeneID:100152361 KEGG:ssc:100152361
Uniprot:F1SH51
Length = 1288
Score = 186 (70.5 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1168 DPFAEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1227
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1228 KNVSIVAFYI 1237
>UNIPROTKB|Q9ERA5 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:47230 "Microtus arvalis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 SUPFAM:SSF75553
HOVERGEN:HBG106696 EMBL:AJ299713 EMBL:AJ299717
ProteinModelPortal:Q9ERA5 Uniprot:Q9ERA5
Length = 1243
Score = 185 (70.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1123 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1182
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1183 KNVSIVAFYI 1192
>UNIPROTKB|E9PD53 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 EMBL:AC024221 HGNC:HGNC:14013
IPI:IPI00793575 ProteinModelPortal:E9PD53 SMR:E9PD53
Ensembl:ENST00000469762 UCSC:uc003fdi.3 ArrayExpress:E9PD53
Bgee:E9PD53 Uniprot:E9PD53
Length = 1263
Score = 185 (70.2 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1143 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1202
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1203 KNVSIVAFYI 1212
>UNIPROTKB|F1NDN4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 EMBL:AADN02021066
IPI:IPI00684483 Ensembl:ENSGALT00000032997 ArrayExpress:F1NDN4
Uniprot:F1NDN4
Length = 1274
Score = 185 (70.2 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1139 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1198
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1199 KNVSIVAFYI 1208
>MGI|MGI:1917349 [details] [associations]
symbol:Smc4 "structural maintenance of chromosomes 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000796 "condensin complex" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=ISO] [GO:0010032
"meiotic chromosome condensation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IMP]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 MGI:MGI:1917349
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0006310 GO:GO:0046982
GO:GO:0045132 GO:GO:0007076 GO:GO:0051383 GO:GO:0000796
GO:GO:0010032 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 PDB:3L51
PDBsum:3L51 OMA:IAIEFLT CTD:10051 HOGENOM:HOG000184777
HOVERGEN:HBG106696 OrthoDB:EOG4PZJ5V EMBL:AJ534940 EMBL:BC005507
EMBL:BC062939 EMBL:AK088350 EMBL:AK088846 IPI:IPI00229397
RefSeq:NP_598547.1 UniGene:Mm.206841 ProteinModelPortal:Q8CG47
SMR:Q8CG47 STRING:Q8CG47 PhosphoSite:Q8CG47 PaxDb:Q8CG47
PRIDE:Q8CG47 Ensembl:ENSMUST00000042901 GeneID:70099 KEGG:mmu:70099
UCSC:uc008pma.1 InParanoid:Q8CG47 ChiTaRS:SMC4
EvolutionaryTrace:Q8CG47 NextBio:330998 Bgee:Q8CG47 CleanEx:MM_SMC4
Genevestigator:Q8CG47 GermOnline:ENSMUSG00000034349 Uniprot:Q8CG47
Length = 1286
Score = 185 (70.2 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1166 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1225
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1226 KNVSIVAFYI 1235
>UNIPROTKB|F1MAD9 [details] [associations]
symbol:Smc4 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:1306680 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 IPI:IPI00372213 RefSeq:NP_001032262.2 UniGene:Rn.163695
Ensembl:ENSRNOT00000013931 GeneID:295107 KEGG:rno:295107
NextBio:638993 Uniprot:F1MAD9
Length = 1286
Score = 185 (70.2 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1166 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1225
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1226 KNVSIVAFYI 1235
>UNIPROTKB|E2RCX4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:AAEX03017331 RefSeq:XP_535848.2
Ensembl:ENSCAFT00000022729 GeneID:478679 KEGG:cfa:478679
Uniprot:E2RCX4
Length = 1288
Score = 185 (70.2 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1168 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1227
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1228 KNVSIVAFYI 1237
>UNIPROTKB|Q9NTJ3 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IDA;TAS]
[GO:0007076 "mitotic chromosome condensation" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0005524 "ATP binding"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 EMBL:CH471052
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 KO:K06675 SUPFAM:SSF75553
EMBL:AC024221 OMA:IAIEFLT EMBL:AB019987 EMBL:AL136877 EMBL:AL833949
EMBL:AF092564 IPI:IPI00328298 IPI:IPI00411559 PIR:T46486
RefSeq:NP_001002800.1 RefSeq:NP_005487.3 UniGene:Hs.58992
ProteinModelPortal:Q9NTJ3 SMR:Q9NTJ3 IntAct:Q9NTJ3
MINT:MINT-5005675 STRING:Q9NTJ3 PhosphoSite:Q9NTJ3 DMDM:30173386
PaxDb:Q9NTJ3 PeptideAtlas:Q9NTJ3 PRIDE:Q9NTJ3 DNASU:10051
Ensembl:ENST00000344722 Ensembl:ENST00000357388
Ensembl:ENST00000360111 Ensembl:ENST00000462787 GeneID:10051
KEGG:hsa:10051 UCSC:uc003fdh.3 UCSC:uc010hwd.3 CTD:10051
GeneCards:GC03P160117 HGNC:HGNC:14013 HPA:HPA018259 HPA:HPA029449
MIM:605575 neXtProt:NX_Q9NTJ3 PharmGKB:PA37834 HOGENOM:HOG000184777
HOVERGEN:HBG106696 InParanoid:Q9NTJ3 OrthoDB:EOG4PZJ5V
PhylomeDB:Q9NTJ3 GenomeRNAi:10051 NextBio:37969 ArrayExpress:Q9NTJ3
Bgee:Q9NTJ3 CleanEx:HS_SMC4 Genevestigator:Q9NTJ3
GermOnline:ENSG00000113810 Uniprot:Q9NTJ3
Length = 1288
Score = 185 (70.2 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1168 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1227
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1228 KNVSIVAFYI 1237
>UNIPROTKB|P50532 [details] [associations]
symbol:smc4 "Structural maintenance of chromosomes protein
4" species:8355 "Xenopus laevis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 KO:K06675 SUPFAM:SSF75553
CTD:10051 HOVERGEN:HBG106696 EMBL:U13673 PIR:A55094
RefSeq:NP_001081371.1 UniGene:Xl.927 ProteinModelPortal:P50532
IntAct:P50532 GeneID:397799 KEGG:xla:397799 Xenbase:XB-GENE-5865892
Uniprot:P50532
Length = 1290
Score = 185 (70.2 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1162 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1221
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1222 KNVSIVAFYI 1231
>UNIPROTKB|F1P3C6 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:AADN02021066 IPI:IPI00573837 Ensembl:ENSGALT00000015551
ArrayExpress:F1P3C6 Uniprot:F1P3C6
Length = 1300
Score = 185 (70.2 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 34/70 (48%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H Y P P + +DEIDAALD
Sbjct: 1165 DPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDF 1224
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1225 KNVSIVAFYI 1234
>ZFIN|ZDB-GENE-020419-21 [details] [associations]
symbol:smc4 "structural maintenance of chromosomes
4" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-020419-21 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 CTD:10051 HOGENOM:HOG000184777 HOVERGEN:HBG106696
HSSP:Q9X0R4 EMBL:AY099521 IPI:IPI00504040 RefSeq:NP_775360.1
UniGene:Dr.77769 ProteinModelPortal:Q8JGS5 STRING:Q8JGS5
PRIDE:Q8JGS5 GeneID:192332 KEGG:dre:192332 InParanoid:Q8JGS5
NextBio:20797168 ArrayExpress:Q8JGS5 Bgee:Q8JGS5 Uniprot:Q8JGS5
Length = 1289
Score = 182 (69.1 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
+P+ +G+ ++ P K ++ + NLSGGEKT+++LAL+FA+H + P P + +DEIDAALD
Sbjct: 1167 DPFSEGIMFSVRPPKKSWKKIYNLSGGEKTLSSLALVFALHHFKPTPLYFMDEIDAALDF 1226
Query: 154 TNIGKVASYI 163
N+ VA YI
Sbjct: 1227 KNVSIVACYI 1236
>WB|WBGene00001086 [details] [associations]
symbol:dpy-27 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IMP]
[GO:0042464 "dosage compensation by hypoactivation of X chromosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0000228
"nuclear chromosome" evidence=IDA] [GO:0000805 "X chromosome"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046536 "dosage compensation complex"
evidence=IPI] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0043565 GO:GO:0006281
GO:GO:0016358 GO:GO:0010171 GO:GO:0040011 GO:GO:0006310
GO:GO:0030261 EMBL:Z35602 GO:GO:0000228 GO:GO:0000805 GO:GO:0042464
GO:GO:0007062 EMBL:L35274 PIR:T24216 RefSeq:NP_497771.1
ProteinModelPortal:P48996 SMR:P48996 IntAct:P48996 STRING:P48996
PaxDb:P48996 PRIDE:P48996 EnsemblMetazoa:R13G10.1 GeneID:175492
KEGG:cel:CELE_R13G10.1 UCSC:R13G10.1 CTD:175492 WormBase:R13G10.1
eggNOG:COG1196 GeneTree:ENSGT00580000081617 HOGENOM:HOG000021811
InParanoid:P48996 KO:K06675 OMA:FHKNLTM NextBio:888386
GO:GO:0046536 SUPFAM:SSF75553 Uniprot:P48996
Length = 1469
Score = 179 (68.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 34/71 (47%), Positives = 52/71 (73%)
Query: 94 EPYLQGVNYNCVAPGKR-FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD 152
+P+ G+ ++ V P K+ ++ + NLSGGEKT+A+L +FA+H Y P P +V+DEIDAALD
Sbjct: 1222 DPFDGGIKFS-VRPAKKSWKLIENLSGGEKTLASLCFVFAMHHYRPTPLYVMDEIDAALD 1280
Query: 153 NTNIGKVASYI 163
N+ +A+YI
Sbjct: 1281 LNNVSLIANYI 1291
>UNIPROTKB|P48996 [details] [associations]
symbol:dpy-27 "Chromosome condensation protein dpy-27"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0043565 GO:GO:0006281
GO:GO:0016358 GO:GO:0010171 GO:GO:0040011 GO:GO:0006310
GO:GO:0030261 EMBL:Z35602 GO:GO:0000228 GO:GO:0000805 GO:GO:0042464
GO:GO:0007062 EMBL:L35274 PIR:T24216 RefSeq:NP_497771.1
ProteinModelPortal:P48996 SMR:P48996 IntAct:P48996 STRING:P48996
PaxDb:P48996 PRIDE:P48996 EnsemblMetazoa:R13G10.1 GeneID:175492
KEGG:cel:CELE_R13G10.1 UCSC:R13G10.1 CTD:175492 WormBase:R13G10.1
eggNOG:COG1196 GeneTree:ENSGT00580000081617 HOGENOM:HOG000021811
InParanoid:P48996 KO:K06675 OMA:FHKNLTM NextBio:888386
GO:GO:0046536 SUPFAM:SSF75553 Uniprot:P48996
Length = 1469
Score = 179 (68.1 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 34/71 (47%), Positives = 52/71 (73%)
Query: 94 EPYLQGVNYNCVAPGKR-FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD 152
+P+ G+ ++ V P K+ ++ + NLSGGEKT+A+L +FA+H Y P P +V+DEIDAALD
Sbjct: 1222 DPFDGGIKFS-VRPAKKSWKLIENLSGGEKTLASLCFVFAMHHYRPTPLYVMDEIDAALD 1280
Query: 153 NTNIGKVASYI 163
N+ +A+YI
Sbjct: 1281 LNNVSLIANYI 1291
>TIGR_CMR|CHY_1443 [details] [associations]
symbol:CHY_1443 "chromosome segregation protein SMC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=ISS] [GO:0030261 "chromosome condensation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392
KO:K03529 TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_360275.1
ProteinModelPortal:Q3AC59 STRING:Q3AC59 GeneID:3728135
KEGG:chy:CHY_1443 PATRIC:21276017
BioCyc:CHYD246194:GJCN-1442-MONOMER Uniprot:Q3AC59
Length = 1185
Score = 175 (66.7 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 34/70 (48%), Positives = 49/70 (70%)
Query: 94 EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
E +G+ PGK+ QP+ LSGGE+ +A++ALLFA+ + P+PF VLDEIDAALD
Sbjct: 1068 EDQKEGIEIIVELPGKKRQPLGLLSGGERALASIALLFALFNLKPSPFCVLDEIDAALDE 1127
Query: 154 TNIGKVASYI 163
N+ + A+Y+
Sbjct: 1128 ANVQRFAAYL 1137
>TIGR_CMR|BA_3986 [details] [associations]
symbol:BA_3986 "chromosome segregation SMC protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
OMA:CQNGKIP HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 RefSeq:NP_846228.1 RefSeq:YP_020625.1
RefSeq:YP_029950.1 ProteinModelPortal:Q81WI9 IntAct:Q81WI9
DNASU:1086762 EnsemblBacteria:EBBACT00000012710
EnsemblBacteria:EBBACT00000015269 EnsemblBacteria:EBBACT00000024406
GeneID:1086762 GeneID:2817444 GeneID:2848221 KEGG:ban:BA_3986
KEGG:bar:GBAA_3986 KEGG:bat:BAS3699 ProtClustDB:CLSK873325
BioCyc:BANT260799:GJAJ-3757-MONOMER
BioCyc:BANT261594:GJ7F-3874-MONOMER Uniprot:Q81WI9
Length = 1189
Score = 170 (64.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 33/73 (45%), Positives = 46/73 (63%)
Query: 91 NPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAA 150
NPE+ G++ PGK+ Q + LSGGE+ + A+ALLF I P PF VLDE++AA
Sbjct: 1064 NPEDLLNTGIDIVAQPPGKKLQNLGLLSGGERALTAIALLFGILKVRPVPFCVLDEVEAA 1123
Query: 151 LDNTNIGKVASYI 163
LD N+ + A Y+
Sbjct: 1124 LDEANVARFAQYL 1136
>UNIPROTKB|Q10970 [details] [associations]
symbol:smc "Chromosome partition protein Smc" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005618 GO:GO:0005694 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:BX842581 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K03529
TIGRFAMs:TIGR02168 EMBL:AJ414609 PIR:B70748 RefSeq:NP_217438.2
RefSeq:NP_337503.1 RefSeq:YP_006516375.1 ProteinModelPortal:Q10970
SMR:Q10970 PhosSite:P12071629 PRIDE:Q10970
EnsemblBacteria:EBMYCT00000000305 EnsemblBacteria:EBMYCT00000069167
GeneID:13317715 GeneID:887179 GeneID:925284 KEGG:mtc:MT2990
KEGG:mtu:Rv2922c KEGG:mtv:RVBD_2922c PATRIC:18128344
TubercuList:Rv2922c HOGENOM:HOG000036389 OMA:GDITKFI
ProtClustDB:CLSK881165 Uniprot:Q10970
Length = 1205
Score = 152 (58.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 92 PEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAAL 151
P++ G+ PGK+ ++ LSGGEK + A+A+L AI P+PF+++DE++AAL
Sbjct: 1078 PDDMLTTGIEVEARPPGKKITRLSLLSGGEKALTAVAMLVAIFRARPSPFYIMDEVEAAL 1137
Query: 152 DNTNIGKVAS 161
D+ N+ ++ S
Sbjct: 1138 DDVNLRRLLS 1147
Score = 36 (17.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 41 NLSGGEKTVAALALLFAIHRIATIRSLGLEDL 72
N SG V ALA + T+R +ED+
Sbjct: 33 NGSGKSNVVDALAWVMGEQGAKTLRGGKMEDV 64
>UNIPROTKB|P51834 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:D64116 EMBL:D49781 PIR:G69708 RefSeq:NP_389476.2
ProteinModelPortal:P51834 SMR:P51834 IntAct:P51834
EnsemblBacteria:EBBACT00000001044 GeneID:938085 KEGG:bsu:BSU15940
PATRIC:18974993 GenoList:BSU15940 HOGENOM:HOG000036392 KO:K03529
ProtClustDB:CLSK2765274 BioCyc:BSUB:BSU15940-MONOMER
TIGRFAMs:TIGR02168 Uniprot:P51834
Length = 1186
Score = 161 (61.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 91 NPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAA 150
+P + GV PGK+ Q + LSGGE+ + A+ALLF+I P PF VLDE++AA
Sbjct: 1063 DPNDLLHSGVEIIAQPPGKKLQNLNLLSGGERALTAIALLFSILKVRPVPFCVLDEVEAA 1122
Query: 151 LDNTNIGKVASYI 163
LD N+ + A Y+
Sbjct: 1123 LDEANVFRFAQYL 1135
>TIGR_CMR|GSU_1130 [details] [associations]
symbol:GSU_1130 "chromosome segregation SMC protein,
putative" species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 TIGRFAMs:TIGR02168 HSSP:Q9X0R4
EMBL:AJ543647 ProteinModelPortal:Q84EX7 PATRIC:22025022
ProtClustDB:CLSK924468 Uniprot:Q84EX7
Length = 1175
Score = 160 (61.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 93 EEPYLQ-GVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAAL 151
EE L+ G++ PGK+ Q +T LSGGEK + A+AL+F+I P PF +LDE+DA L
Sbjct: 1060 EEDLLETGIDIIVQPPGKKLQNVTLLSGGEKALTAVALIFSIFLIKPTPFCLLDEVDAPL 1119
Query: 152 DNTNIGK 158
D+ NIG+
Sbjct: 1120 DDANIGR 1126
>UNIPROTKB|F1SP73 [details] [associations]
symbol:F1SP73 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:WIASERQ
Ensembl:ENSSSCT00000005947 Uniprot:F1SP73
Length = 1169
Score = 135 (52.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 83 AQAFLGPENPE-EPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAP 140
A A L P PE + L G+ + VA G ++ +T LSGG++++ AL+L+ ++ + PAP
Sbjct: 1030 ANAMLAP--PEGQTVLDGLEFK-VALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAP 1086
Query: 141 FFVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1087 IYILDEVDAALDLSHTQNIGQM 1108
Score = 51 (23.0 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 21 YLQGVNYNCVAPGKRFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
Y Q N P F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 14 YAQRTEVNGFDP--LFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDL 65
Score = 40 (19.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 33 GKRFQPMTNLSGGEKTVAALAL 54
G F P LSGG ++ AA L
Sbjct: 632 GDVFDPHGTLSGGARSQAASIL 653
>UNIPROTKB|F1SRP0 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:CU861938 Ensembl:ENSSSCT00000005946 Uniprot:F1SRP0
Length = 1191
Score = 135 (52.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 83 AQAFLGPENPE-EPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAP 140
A A L P PE + L G+ + VA G ++ +T LSGG++++ AL+L+ ++ + PAP
Sbjct: 1052 ANAMLAP--PEGQTVLDGLEFK-VALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAP 1108
Query: 141 FFVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1109 IYILDEVDAALDLSHTQNIGQM 1130
Score = 51 (23.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 21 YLQGVNYNCVAPGKRFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
Y Q N P F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 14 YAQRTEVNGFDP--LFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDL 65
Score = 40 (19.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 33 GKRFQPMTNLSGGEKTVAALAL 54
G F P LSGG ++ AA L
Sbjct: 653 GDVFDPHGTLSGGARSQAASIL 674
>UNIPROTKB|E2R7R8 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:AAEX03008008 Ensembl:ENSCAFT00000004208 Uniprot:E2R7R8
Length = 1191
Score = 135 (52.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 83 AQAFLGPENPE-EPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAP 140
A A L P PE + L G+ + VA G ++ +T LSGG++++ AL+L+ ++ + PAP
Sbjct: 1052 ANAMLAP--PEGQTVLDGLEFK-VALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAP 1108
Query: 141 FFVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1109 IYILDEVDAALDLSHTQNIGQM 1130
Score = 51 (23.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 21 YLQGVNYNCVAPGKRFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
Y Q N P F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 14 YAQRTEVNGFDP--LFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDL 65
>MGI|MGI:106067 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=ISO]
[GO:0000793 "condensed chromosome" evidence=ISO;IDA] [GO:0000796
"condensin complex" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=ISO] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:106067 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0006281 EMBL:CH466565
GO:GO:0006310 GO:GO:0045132 GO:GO:0000793 GO:GO:0007076
GO:GO:0051383 GO:GO:0000228 GO:GO:0000796 GO:GO:0010032
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
OMA:CQNGKIP CTD:10592 HOVERGEN:HBG106605 OrthoDB:EOG49S65K
EMBL:AJ534939 EMBL:AK013109 EMBL:AK019977 EMBL:AL732619
EMBL:BC094380 EMBL:U42385 IPI:IPI00987134 RefSeq:NP_032043.3
UniGene:Mm.2999 PDB:3L51 PDBsum:3L51 ProteinModelPortal:Q8CG48
SMR:Q8CG48 IntAct:Q8CG48 STRING:Q8CG48 PhosphoSite:Q8CG48
PaxDb:Q8CG48 PRIDE:Q8CG48 Ensembl:ENSMUST00000102915
Ensembl:ENSMUST00000117280 GeneID:14211 KEGG:mmu:14211
InParanoid:Q52KE9 EvolutionaryTrace:Q8CG48 NextBio:285461
Bgee:Q8CG48 CleanEx:MM_SMC2 Genevestigator:Q8CG48
GermOnline:ENSMUSG00000028312 Uniprot:Q8CG48
Length = 1191
Score = 135 (52.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 83 AQAFLGPENPE-EPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAP 140
A A L P PE + L G+ + VA G ++ +T LSGG++++ AL+L+ ++ + PAP
Sbjct: 1052 ANAMLAP--PEGQTVLDGLEFK-VALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAP 1108
Query: 141 FFVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1109 IYILDEVDAALDLSHTQNIGQM 1130
Score = 51 (23.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 21 YLQGVNYNCVAPGKRFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
Y Q N P F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 14 YAQRTEVNGFDP--LFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDL 65
>UNIPROTKB|D4A5Q2 [details] [associations]
symbol:Smc2 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 RGD:1305227 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
CTD:10592 OrthoDB:EOG49S65K IPI:IPI00950982 RefSeq:NP_001102136.2
Ensembl:ENSRNOT00000066226 GeneID:362519 KEGG:rno:362519
ArrayExpress:D4A5Q2 Uniprot:D4A5Q2
Length = 1191
Score = 135 (52.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 83 AQAFLGPENPE-EPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAP 140
A A L P PE + L G+ + VA G ++ +T LSGG++++ AL+L+ ++ + PAP
Sbjct: 1052 ANAMLAP--PEGQTVLDGLEFK-VALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAP 1108
Query: 141 FFVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1109 IYILDEVDAALDLSHTQNIGQM 1130
Score = 51 (23.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 21 YLQGVNYNCVAPGKRFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
Y Q N P F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 14 YAQRTEVNGFDP--LFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDL 65
>UNIPROTKB|O95347 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0010032 "meiotic chromosome condensation"
evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0007076 "mitotic chromosome condensation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000793
"condensed chromosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 GO:GO:0006281
GO:GO:0006310 EMBL:CH471105 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HOGENOM:HOG000228249 OMA:CQNGKIP
CTD:10592 HOVERGEN:HBG106605 EMBL:AF092563 EMBL:AL833191
EMBL:AL161791 EMBL:AL354938 EMBL:BC130385 EMBL:AF113673
EMBL:BN000163 IPI:IPI00007927 IPI:IPI00232806 RefSeq:NP_001036015.1
RefSeq:NP_001036016.1 RefSeq:NP_001252531.1 RefSeq:NP_006435.2
UniGene:Hs.119023 ProteinModelPortal:O95347 SMR:O95347
DIP:DIP-35422N IntAct:O95347 MINT:MINT-1161754 STRING:O95347
PhosphoSite:O95347 PaxDb:O95347 PRIDE:O95347
Ensembl:ENST00000286398 Ensembl:ENST00000303219
Ensembl:ENST00000374787 Ensembl:ENST00000374793
Ensembl:ENST00000493955 GeneID:10592 KEGG:hsa:10592 UCSC:uc004bbv.3
GeneCards:GC09P106856 H-InvDB:HIX0008250 HGNC:HGNC:14011 MIM:605576
neXtProt:NX_O95347 PharmGKB:PA37833 InParanoid:O95347
OrthoDB:EOG49S65K ChiTaRS:SMC2 GenomeRNAi:10592 NextBio:40225
ArrayExpress:O95347 Bgee:O95347 CleanEx:HS_SMC2
Genevestigator:O95347 GermOnline:ENSG00000136824 Uniprot:O95347
Length = 1197
Score = 135 (52.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 83 AQAFLGPENPE-EPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAP 140
A A L P PE + L G+ + VA G ++ +T LSGG++++ AL+L+ ++ + PAP
Sbjct: 1052 ANAMLAP--PEGQTVLDGLEFK-VALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAP 1108
Query: 141 FFVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1109 IYILDEVDAALDLSHTQNIGQM 1130
Score = 51 (23.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 21 YLQGVNYNCVAPGKRFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
Y Q N P F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 14 YAQRTEVNGFDP--LFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDL 65
>RGD|1305227 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=ISO] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000796 "condensin complex" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA;ISO] [GO:0010032
"meiotic chromosome condensation" evidence=ISO] [GO:0045132
"meiotic chromosome segregation" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051383 "kinetochore
organization" evidence=ISO] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 RGD:1305227 GO:GO:0005524
GO:GO:0005737 GO:GO:0006281 GO:GO:0006310 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
PANTHER:PTHR18937:SF9 IPI:IPI00358733 PRIDE:D4AB57
Ensembl:ENSRNOT00000030563 UCSC:RGD:1305227 ArrayExpress:D4AB57
Uniprot:D4AB57
Length = 1230
Score = 135 (52.6 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 33/82 (40%), Positives = 53/82 (64%)
Query: 83 AQAFLGPENPE-EPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAP 140
A A L P PE + L G+ + VA G ++ +T LSGG++++ AL+L+ ++ + PAP
Sbjct: 1052 ANAMLAP--PEGQTVLDGLEFK-VALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAP 1108
Query: 141 FFVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1109 IYILDEVDAALDLSHTQNIGQM 1130
Score = 51 (23.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 21 YLQGVNYNCVAPGKRFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
Y Q N P F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 14 YAQRTEVNGFDP--LFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDL 65
>GENEDB_PFALCIPARUM|PF11_0317 [details] [associations]
symbol:PF11_0317 "structural maintenance of
chromosome protein, putative" species:5833 "Plasmodium falciparum"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0003680 "AT DNA binding" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008278 "cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0016887 GO:GO:0000070
GO:GO:0003690 GO:GO:0003680 EMBL:AE014186 GO:GO:0008278
SUPFAM:SSF75553 KO:K06636 HSSP:Q9X0R4 RefSeq:XP_001347988.1
ProteinModelPortal:Q8II57 EnsemblProtists:PF11_0317:mRNA
GeneID:810864 KEGG:pfa:PF11_0317 EuPathDB:PlasmoDB:PF3D7_1130700
HOGENOM:HOG000282411 OMA:CEREASK ProtClustDB:CLSZ2515177
Uniprot:Q8II57
Length = 1818
Score = 161 (61.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 93 EEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD 152
+EP+ G+ YN + P KR+ ++ LSGGEK+++ALAL+F+I Y F +LDE+DA +D
Sbjct: 1696 DEPFYCGIKYNNMPPMKRYFEISELSGGEKSISALALIFSIQKYINNSFIILDEVDANMD 1755
Query: 153 NTNIGKVASYI 163
I + Y+
Sbjct: 1756 PLKIQSLTRYL 1766
Score = 116 (45.9 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 18 EEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHRIATIRSLGLEDL-RSMA 76
+EP+ G+ YN + P KR+ ++ LSGGEK+++ALAL+F+I + + L+++ +M
Sbjct: 1696 DEPFYCGIKYNNMPPMKRYFEISELSGGEKSISALALIFSIQKYINNSFIILDEVDANMD 1755
Query: 77 LAQNQSAQAFLGPENPE 93
+ QS +L N +
Sbjct: 1756 PLKIQSLTRYLNSINSQ 1772
>UNIPROTKB|Q8II57 [details] [associations]
symbol:PF11_0317 "Structural maintenance of chromosome
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0000070 "mitotic sister chromatid segregation" evidence=ISS]
[GO:0003680 "AT DNA binding" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0008278 "cohesin complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0016887 GO:GO:0000070
GO:GO:0003690 GO:GO:0003680 EMBL:AE014186 GO:GO:0008278
SUPFAM:SSF75553 KO:K06636 HSSP:Q9X0R4 RefSeq:XP_001347988.1
ProteinModelPortal:Q8II57 EnsemblProtists:PF11_0317:mRNA
GeneID:810864 KEGG:pfa:PF11_0317 EuPathDB:PlasmoDB:PF3D7_1130700
HOGENOM:HOG000282411 OMA:CEREASK ProtClustDB:CLSZ2515177
Uniprot:Q8II57
Length = 1818
Score = 161 (61.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 93 EEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD 152
+EP+ G+ YN + P KR+ ++ LSGGEK+++ALAL+F+I Y F +LDE+DA +D
Sbjct: 1696 DEPFYCGIKYNNMPPMKRYFEISELSGGEKSISALALIFSIQKYINNSFIILDEVDANMD 1755
Query: 153 NTNIGKVASYI 163
I + Y+
Sbjct: 1756 PLKIQSLTRYL 1766
Score = 116 (45.9 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 18 EEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHRIATIRSLGLEDL-RSMA 76
+EP+ G+ YN + P KR+ ++ LSGGEK+++ALAL+F+I + + L+++ +M
Sbjct: 1696 DEPFYCGIKYNNMPPMKRYFEISELSGGEKSISALALIFSIQKYINNSFIILDEVDANMD 1755
Query: 77 LAQNQSAQAFLGPENPE 93
+ QS +L N +
Sbjct: 1756 PLKIQSLTRYLNSINSQ 1772
>UNIPROTKB|Q5LNH7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0003824 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K03529
RefSeq:YP_168431.1 ProteinModelPortal:Q5LNH7 GeneID:3194939
KEGG:sil:SPO3228 PATRIC:23379903 HOGENOM:HOG000036390 OMA:AHERVQA
ProtClustDB:CLSK864767 Uniprot:Q5LNH7
Length = 1151
Score = 158 (60.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 93 EEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD 152
++P G+ C PGK+ ++ LSGGE+T+ A+AL+FA+ +PAP VLDE+DA LD
Sbjct: 1028 DDPLDAGLEIMCQPPGKKLSTLSLLSGGEQTLTAMALIFAVFLANPAPICVLDEVDAPLD 1087
Query: 153 NTNI 156
+ N+
Sbjct: 1088 DANV 1091
>TIGR_CMR|SPO_3228 [details] [associations]
symbol:SPO_3228 "SMC protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 PIRSF:PIRSF005719 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005737 GO:GO:0005694
GO:GO:0007059 GO:GO:0003824 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K03529
RefSeq:YP_168431.1 ProteinModelPortal:Q5LNH7 GeneID:3194939
KEGG:sil:SPO3228 PATRIC:23379903 HOGENOM:HOG000036390 OMA:AHERVQA
ProtClustDB:CLSK864767 Uniprot:Q5LNH7
Length = 1151
Score = 158 (60.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 93 EEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD 152
++P G+ C PGK+ ++ LSGGE+T+ A+AL+FA+ +PAP VLDE+DA LD
Sbjct: 1028 DDPLDAGLEIMCQPPGKKLSTLSLLSGGEQTLTAMALIFAVFLANPAPICVLDEVDAPLD 1087
Query: 153 NTNI 156
+ N+
Sbjct: 1088 DANV 1091
>UNIPROTKB|E1C614 [details] [associations]
symbol:E1C614 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819568
Ensembl:ENSGALT00000037605 OMA:FESINES ArrayExpress:E1C614
Uniprot:E1C614
Length = 1149
Score = 135 (52.6 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 83 AQAFLGPENPEEPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAPF 141
A+A L P + L G+ + V G ++ +T LSGG++++AAL+L+ AI + PAP
Sbjct: 1012 AKAMLVPSKKQN-ILDGLEFR-VGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPI 1069
Query: 142 FVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1070 YILDEVDAALDLSHTQNIGQM 1090
Score = 49 (22.3 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 36 FQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 27 FNAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDL 65
>UNIPROTKB|E1C610 [details] [associations]
symbol:E1C610 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0000796 "condensin
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00823281
Ensembl:ENSGALT00000037611 ArrayExpress:E1C610 Uniprot:E1C610
Length = 1173
Score = 135 (52.6 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 83 AQAFLGPENPEEPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAPF 141
A+A L P + L G+ + V G ++ +T LSGG++++AAL+L+ AI + PAP
Sbjct: 1052 AKAMLVPSKKQN-ILDGLEFR-VGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPI 1109
Query: 142 FVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1110 YILDEVDAALDLSHTQNIGQM 1130
Score = 49 (22.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 36 FQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 27 FNAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDL 65
>UNIPROTKB|E1C612 [details] [associations]
symbol:E1C612 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819262
Ensembl:ENSGALT00000037609 ArrayExpress:E1C612 Uniprot:E1C612
Length = 1173
Score = 135 (52.6 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 83 AQAFLGPENPEEPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAPF 141
A+A L P + L G+ + V G ++ +T LSGG++++AAL+L+ AI + PAP
Sbjct: 1036 AKAMLVPSKKQN-ILDGLEFR-VGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPI 1093
Query: 142 FVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1094 YILDEVDAALDLSHTQNIGQM 1114
Score = 49 (22.3 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 36 FQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 27 FNAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDL 65
>POMBASE|SPBP4H10.06c [details] [associations]
symbol:cut14 "condensin complex subunit Cut14"
species:4896 "Schizosaccharomyces pombe" [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=ISM] [GO:0051304 "chromosome
separation" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBP4H10.06c Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0051301 EMBL:CU329671
GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HOGENOM:HOG000163792 EMBL:D30787 PIR:S51623 RefSeq:NP_596180.1
ProteinModelPortal:P41003 IntAct:P41003 STRING:P41003
EnsemblFungi:SPBP4H10.06c.1 GeneID:2541319 KEGG:spo:SPBP4H10.06c
OMA:GTALEIC OrthoDB:EOG4P2T9B NextBio:20802429 GO:GO:0034500
Uniprot:P41003
Length = 1172
Score = 130 (50.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 89 PENPEEPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEI 147
PEN E + G+ + V G ++ + LSGG++++ ALAL+ ++ Y PAP ++LDEI
Sbjct: 1060 PENKE--FTDGLEIH-VKIGSIWKDSLAELSGGQRSLVALALIMSLLKYKPAPMYILDEI 1116
Query: 148 DAALD---NTNIGKV 159
DAALD NIG++
Sbjct: 1117 DAALDLSHTQNIGRL 1131
Score = 54 (24.1 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 35 RFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
+F +T L+G K+ + A+ + I ++T+R+ L+DL
Sbjct: 26 QFNAITGLNGSGKSNILDAICFVLGITNMSTVRAQNLQDL 65
>UNIPROTKB|Q90988 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9031 "Gallus gallus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:X80792 IPI:IPI00579121 PIR:A54817
RefSeq:NP_990561.1 UniGene:Gga.4066 ProteinModelPortal:Q90988
PRIDE:Q90988 GeneID:396156 KEGG:gga:396156 CTD:10592
HOVERGEN:HBG106605 NextBio:20816212 Uniprot:Q90988
Length = 1189
Score = 135 (52.6 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 83 AQAFLGPENPEEPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAPF 141
A+A L P + L G+ + V G ++ +T LSGG++++AAL+L+ AI + PAP
Sbjct: 1052 AKAMLVPSKKQN-ILDGLEFR-VGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPI 1109
Query: 142 FVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1110 YILDEVDAALDLSHTQNIGQM 1130
Score = 49 (22.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 36 FQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 27 FNAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDL 65
>UNIPROTKB|E1C782 [details] [associations]
symbol:E1C782 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
IPI:IPI00579121 EMBL:AADN02057751 EMBL:AADN02057752
EMBL:AADN02057753 EMBL:AADN02057754 EMBL:AADN02057755
Ensembl:ENSGALT00000025306 ArrayExpress:E1C782 Uniprot:E1C782
Length = 1190
Score = 135 (52.6 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 83 AQAFLGPENPEEPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAPF 141
A+A L P + L G+ + V G ++ +T LSGG++++AAL+L+ AI + PAP
Sbjct: 1053 AKAMLVPSKKQN-ILDGLEFR-VGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPI 1110
Query: 142 FVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1111 YILDEVDAALDLSHTQNIGQM 1131
Score = 49 (22.3 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 36 FQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 27 FNAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDL 65
>UNIPROTKB|E1C611 [details] [associations]
symbol:E1C611 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0000228 "nuclear chromosome"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00818627
Ensembl:ENSGALT00000037610 ArrayExpress:E1C611 Uniprot:E1C611
Length = 1192
Score = 135 (52.6 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 83 AQAFLGPENPEEPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAPF 141
A+A L P + L G+ + V G ++ +T LSGG++++AAL+L+ AI + PAP
Sbjct: 1055 AKAMLVPSKKQN-ILDGLEFR-VGLGDIWKENLTELSGGQRSLAALSLILAILLFKPAPI 1112
Query: 142 FVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1113 YILDEVDAALDLSHTQNIGQM 1133
Score = 49 (22.3 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 36 FQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 27 FNAITGLNGSGKSNILDSICFLLGISNLSQVRASSLQDL 65
>UNIPROTKB|F1MY41 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0000796 "condensin complex"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000228
"nuclear chromosome" evidence=ISS] [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0046982 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:DAAA02024368 IPI:IPI01001793 Ensembl:ENSBTAT00000011562
NextBio:20877854 Uniprot:F1MY41
Length = 1191
Score = 133 (51.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 33/80 (41%), Positives = 51/80 (63%)
Query: 83 AQAFLGPENPE-EPYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAP 140
A A L P PE + L G+ + VA G ++ +T LSGG++++ AL+L+ ++ + PAP
Sbjct: 1052 ANAMLAP--PEGQTVLDGLEFK-VALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAP 1108
Query: 141 FFVLDEIDAALD---NTNIG 157
++LDE+DAALD NIG
Sbjct: 1109 IYILDEVDAALDLSHTQNIG 1128
Score = 51 (23.0 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 21 YLQGVNYNCVAPGKRFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
Y Q N P F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 14 YAQRTEVNGFDP--LFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDL 65
Score = 42 (19.8 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 33 GKRFQPMTNLSGGEKTVAALALL 55
G F P LSGG ++ AA L+
Sbjct: 654 GDVFDPHGTLSGGARSQAASILM 676
>UNIPROTKB|Q71YL3 [details] [associations]
symbol:smC "Chromosome partition protein Smc"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529
TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_014424.1
ProteinModelPortal:Q71YL3 STRING:Q71YL3 GeneID:2797604
KEGG:lmf:LMOf2365_1831 PATRIC:20324957 ProtClustDB:CLSK2518461
Uniprot:Q71YL3
Length = 1186
Score = 157 (60.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 91 NPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAA 150
+PE G++ PGK+ Q ++ SGGE+ + A+ALLFAI P PF +LDE++AA
Sbjct: 1063 DPENLLTTGIDIVVQPPGKKLQNLSLRSGGERALTAIALLFAIIRVRPVPFCILDEVEAA 1122
Query: 151 LDNTNIGKVASYI 163
LD N+ + + Y+
Sbjct: 1123 LDEANVTRFSRYL 1135
>ASPGD|ASPL0000004872 [details] [associations]
symbol:smcB species:162425 "Emericella nidulans"
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000796 "condensin
complex" evidence=IEA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
EMBL:BN001301 GO:GO:0006310 GO:GO:0030261 EMBL:AACD01000101
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HOGENOM:HOG000163792 OMA:CQNGKIP
OrthoDB:EOG4P2T9B RefSeq:XP_663503.1 ProteinModelPortal:Q5B0N1
STRING:Q5B0N1 EnsemblFungi:CADANIAT00007134 GeneID:2870708
KEGG:ani:AN5899.2 Uniprot:Q5B0N1
Length = 1179
Score = 129 (50.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 27/59 (45%), Positives = 43/59 (72%)
Query: 105 VAPGKRF-QPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD---NTNIGKV 159
V+ GK + Q +T LSGG++++ AL+L+ A+ + PAP ++LDE+DAALD NIG++
Sbjct: 1074 VSLGKVWKQSLTELSGGQRSLIALSLIMALLQFKPAPMYILDEVDAALDLSHTQNIGRL 1132
Score = 53 (23.7 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 36 FQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
F +T L+G K+ + A+ + I ++T+R+ L+DL
Sbjct: 27 FNSITGLNGSGKSNILDAICFVLGITNMSTVRAQNLQDL 65
>ZFIN|ZDB-GENE-030131-105 [details] [associations]
symbol:smc2 "structural maintenance of chromosomes
2" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 ZFIN:ZDB-GENE-030131-105 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
PANTHER:PTHR18937:SF9 EMBL:BX548248 IPI:IPI00500731
Ensembl:ENSDART00000008616 ArrayExpress:F1R0P1 Bgee:F1R0P1
Uniprot:F1R0P1
Length = 1232
Score = 130 (50.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 34/82 (41%), Positives = 52/82 (63%)
Query: 83 AQAFLGPENPEE-PYLQGVNYNCVAPGKRFQP-MTNLSGGEKTVAALALLFAIHSYHPAP 140
A A L P PE L G+ + VA G ++ +T LSGG++++ AL+L+ A+ + PAP
Sbjct: 1054 ANARLAP--PEGCGVLDGLEFK-VALGNTWKENLTELSGGQRSLVALSLILAMLLFKPAP 1110
Query: 141 FFVLDEIDAALD---NTNIGKV 159
++LDE+DAALD NIG++
Sbjct: 1111 IYILDEVDAALDLSHTQNIGQM 1132
Score = 50 (22.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 36 FQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
F +T L+G K+ + ++ L I ++ +R+ L+DL
Sbjct: 27 FNAITGLNGSGKSNILDSICFLLGISNLSQVRATNLQDL 65
Score = 37 (18.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 23 QGVNYNCVA-PGKRFQPMTNLSGGEKTVAALAL 54
+GV+ V G F P L+GG + A L
Sbjct: 643 KGVSTKTVTLGGDVFDPQGTLTGGARAQTASVL 675
>UNIPROTKB|Q97QG7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 OMA:GDITKFI PIR:G95144 RefSeq:NP_345712.1
ProteinModelPortal:Q97QG7 EnsemblBacteria:EBSTRT00000025640
GeneID:931760 KEGG:spn:SP_1247 PATRIC:19706887
ProtClustDB:CLSK877065 Uniprot:Q97QG7
Length = 1179
Score = 152 (58.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 99 GVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGK 158
GV + PGK+ Q + +SGGEK ++ALALLF+I PF +LDE++AALD N+ +
Sbjct: 1064 GVEISVQPPGKKIQSLNLMSGGEKALSALALLFSIIRVKTIPFVILDEVEAALDEANVKR 1123
Query: 159 VASYI 163
Y+
Sbjct: 1124 FGDYL 1128
>UNIPROTKB|Q81ZL2 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K03529 TIGRFAMs:TIGR02168 EMBL:AJ543641 RefSeq:NP_819572.1
HSSP:Q9X0R4 ProteinModelPortal:Q81ZL2 PRIDE:Q81ZL2 GeneID:1208425
KEGG:cbu:CBU_0540 PATRIC:17929777 HOGENOM:HOG000036391 OMA:WARISKL
ProtClustDB:CLSK914134 BioCyc:CBUR227377:GJ7S-543-MONOMER
Uniprot:Q81ZL2
Length = 1169
Score = 150 (57.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 99 GVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGK 158
GV PGKR + LSGGEK + A+AL+F++ +PAPF +LDE+DA LD+ N+G+
Sbjct: 1053 GVIVRAQPPGKRNVTIHMLSGGEKALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGR 1112
Query: 159 VASYI 163
+
Sbjct: 1113 FCQLV 1117
>TIGR_CMR|CBU_0540 [details] [associations]
symbol:CBU_0540 "SMC family protein" species:227377
"Coxiella burnetii RSA 493" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K03529 TIGRFAMs:TIGR02168 EMBL:AJ543641 RefSeq:NP_819572.1
HSSP:Q9X0R4 ProteinModelPortal:Q81ZL2 PRIDE:Q81ZL2 GeneID:1208425
KEGG:cbu:CBU_0540 PATRIC:17929777 HOGENOM:HOG000036391 OMA:WARISKL
ProtClustDB:CLSK914134 BioCyc:CBUR227377:GJ7S-543-MONOMER
Uniprot:Q81ZL2
Length = 1169
Score = 150 (57.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 99 GVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGK 158
GV PGKR + LSGGEK + A+AL+F++ +PAPF +LDE+DA LD+ N+G+
Sbjct: 1053 GVIVRAQPPGKRNVTIHMLSGGEKALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGR 1112
Query: 159 VASYI 163
+
Sbjct: 1113 FCQLV 1117
>TIGR_CMR|SO_2898 [details] [associations]
symbol:SO_2898 "SMC family protein" species:211586
"Shewanella oneidensis MR-1" [GO:0005524 "ATP binding"
evidence=ISS] [GO:0007059 "chromosome segregation" evidence=ISS]
[GO:0030261 "chromosome condensation" evidence=ISS]
InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR011890
PIRSF:PIRSF005719 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 KO:K03529 TIGRFAMs:TIGR02168 HSSP:Q9X0R4
HOGENOM:HOG000036391 RefSeq:NP_718470.1 ProteinModelPortal:Q7ZAJ7
GeneID:1170588 KEGG:son:SO_2898 PATRIC:23525438 OMA:ELYVEEK
ProtClustDB:CLSK906922 Uniprot:Q7ZAJ7
Length = 1145
Score = 145 (56.1 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 93 EEPYLQ-GVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAAL 151
E+ L+ GV PGK+ + LSGGEK + AL+L+FAI +PAPF +LDE+DA L
Sbjct: 1022 EDDLLETGVTIMAQPPGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAPL 1081
Query: 152 DNTNI 156
D+ N+
Sbjct: 1082 DDANV 1086
>UNIPROTKB|Q9X0R4 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:243274 "Thermotoga maritima MSB8" [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
EMBL:AE000512 GenomeReviews:AE000512_GR GO:GO:0007062
SUPFAM:SSF75553 KO:K03529 TIGRFAMs:TIGR02168 EMBL:AGIJ01000001
PIR:A72287 RefSeq:NP_228987.1 PDB:1E69 PDB:1GXJ PDB:1GXK PDB:1GXL
PDBsum:1E69 PDBsum:1GXJ PDBsum:1GXK PDBsum:1GXL SMR:Q9X0R4
GeneID:898303 KEGG:tma:TM1182 PATRIC:23937304 OMA:NNEVHAL
ProtClustDB:CLSK875623 EvolutionaryTrace:Q9X0R4 Uniprot:Q9X0R4
Length = 1170
Score = 143 (55.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 107 PGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTN 155
PG+R Q ++ LSGGEK + LALLFA+ P+PF+VLDE+D+ LD+ N
Sbjct: 1066 PGRRDQKLSLLSGGEKALVGLALLFALMEIKPSPFYVLDEVDSPLDDYN 1114
>TAIR|locus:2045159 [details] [associations]
symbol:TTN7 "AT2G27170" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0007059 "chromosome
segregation" evidence=ISS;IMP] [GO:0008278 "cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 EMBL:CP002685 GO:GO:0005819 GO:GO:0000785
GO:GO:0003682 HSSP:P01096 GO:GO:0016363 EMBL:AC007154 EMBL:AC007290
GO:GO:0008278 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
PROSITE:PS51131 EMBL:AJ504805 EMBL:AY525642 EMBL:AK220965
EMBL:AK221283 EMBL:AK226305 EMBL:AK229499 IPI:IPI00549149
PIR:F84669 RefSeq:NP_001077968.1 RefSeq:NP_180285.4
UniGene:At.28786 ProteinModelPortal:Q56YN8 SMR:Q56YN8 STRING:Q56YN8
PRIDE:Q56YN8 EnsemblPlants:AT2G27170.1 EnsemblPlants:AT2G27170.2
GeneID:817259 KEGG:ath:AT2G27170 TAIR:At2g27170
HOGENOM:HOG000166512 InParanoid:Q56YN8 KO:K06669 OMA:NKVLEHF
PhylomeDB:Q56YN8 ProtClustDB:CLSN2692426 Genevestigator:Q56YN8
Uniprot:Q56YN8
Length = 1204
Score = 141 (54.7 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 34/64 (53%), Positives = 40/64 (62%)
Query: 90 ENPEEPYLQGVNYNCVAPGK-RFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEID 148
E E Y+ GV G+ Q M LSGG+KTV ALAL+FAI PAPF++ DEID
Sbjct: 1072 EGRVEKYI-GVKVKVSFTGQGETQLMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEID 1130
Query: 149 AALD 152
AALD
Sbjct: 1131 AALD 1134
>FB|FBgn0027783 [details] [associations]
symbol:SMC2 "SMC2" species:7227 "Drosophila melanogaster"
[GO:0007062 "sister chromatid cohesion" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0000796 "condensin complex" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 EMBL:AE013599 GO:GO:0005524
GO:GO:0005634 GO:GO:0005875 GO:GO:0007052 GO:GO:0022008
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
KO:K06674 PANTHER:PTHR18937:SF9 OMA:CQNGKIP CTD:10592 HSSP:Q9X0R4
EMBL:AF179287 RefSeq:NP_610995.1 UniGene:Dm.2168 SMR:Q7KK96
STRING:Q7KK96 EnsemblMetazoa:FBtr0087461 GeneID:36653
KEGG:dme:Dmel_CG10212 UCSC:CG10212-RA FlyBase:FBgn0027783
InParanoid:Q7KK96 OrthoDB:EOG4P5HR3 GenomeRNAi:36653 NextBio:799708
Uniprot:Q7KK96
Length = 1179
Score = 120 (47.3 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 83 AQAFLGPENPEEPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFF 142
A+A L P + L G+ G + + LSGG+K++ AL+L+ A+ + PAP +
Sbjct: 1050 AEAKLNPVHTNG-CLTGLEIKVGFNGIWKESLGELSGGQKSLVALSLVLAMLKFSPAPLY 1108
Query: 143 VLDEIDAALDNTNIGKVASYI 163
+LDE+DAALD ++ + S +
Sbjct: 1109 ILDEVDAALDMSHTQNIGSML 1129
Score = 44 (20.5 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 36 FQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
F +T L+G K+ + ++ + I + +R+ L+DL
Sbjct: 27 FTAITGLNGSGKSNILDSICFVLGISNLQNVRASALQDL 65
>DICTYBASE|DDB_G0276101 [details] [associations]
symbol:smc3 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000785 "chromatin" evidence=ISS] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0276101 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0006275 GO:GO:0000785 EMBL:AAFI02000014
GenomeReviews:CM000151_GR GO:GO:0046982 GO:GO:0007064 GO:GO:0008278
eggNOG:COG1196 SUPFAM:SSF75553 HSSP:P32908 KO:K06669
RefSeq:XP_643274.1 ProteinModelPortal:Q552D9 STRING:Q552D9
PRIDE:Q552D9 EnsemblProtists:DDB0219934 GeneID:8620317
KEGG:ddi:DDB_G0276101 InParanoid:Q552D9 OMA:EHERRES
ProtClustDB:CLSZ2734975 Uniprot:Q552D9
Length = 1437
Score = 138 (53.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 105 VAPGKRFQP--MTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDN 153
V+ G+ +P M LSGG+KT+ ALAL+FA+ PAPF++LDEIDAALD+
Sbjct: 1084 VSFGEGHEPCSMRQLSGGQKTLVALALIFALQRTDPAPFYLLDEIDAALDH 1134
>TAIR|locus:2079107 [details] [associations]
symbol:ATSMC2 "AT3G47460" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005694 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AL096860 EMBL:AL132955 UniGene:At.35803
UniGene:At.71101 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HSSP:P32908 HOGENOM:HOG000163792
ProtClustDB:CLSN2685173 IPI:IPI00530229 PIR:T45706
RefSeq:NP_190330.1 ProteinModelPortal:Q9SN90 SMR:Q9SN90
STRING:Q9SN90 PaxDb:Q9SN90 PRIDE:Q9SN90 EnsemblPlants:AT3G47460.1
GeneID:823900 KEGG:ath:AT3G47460 TAIR:At3g47460 InParanoid:Q9SN90
OMA:WIASERQ PhylomeDB:Q9SN90 Genevestigator:Q9SN90 Uniprot:Q9SN90
Length = 1171
Score = 126 (49.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 90 ENPEE-PYLQGVNYNCVAPGKRF-QPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEI 147
E PE +L G+ VA G + Q ++ LSGG++++ AL+L+ A+ + PAP ++LDE+
Sbjct: 1052 EPPEGGTFLDGLEVR-VAFGDVWKQSLSELSGGQRSLLALSLILALLLFKPAPIYILDEV 1110
Query: 148 DAALD---NTNIGKV 159
DAALD NIG++
Sbjct: 1111 DAALDLSHTQNIGRM 1125
Score = 36 (17.7 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 33 GKRFQPMTNLSGGEKTVAALALLFAIHRIA 62
G FQP L+GG + LL +H +A
Sbjct: 649 GDVFQPSGLLTGGSRKGGG-DLLRQLHDLA 677
>TAIR|locus:2167973 [details] [associations]
symbol:SMC2 "AT5G62410" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000796 "condensin
complex" evidence=ISS] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0031047 "gene silencing by RNA" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051607 "defense
response to virus" evidence=RCA] [GO:0051726 "regulation of cell
cycle" evidence=RCA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AB015469 EMBL:AB019235 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:AF271730 EMBL:AF271731 EMBL:AF306547
IPI:IPI00534765 RefSeq:NP_201047.1 UniGene:At.19029 HSSP:P32908
ProteinModelPortal:Q9C5Y4 SMR:Q9C5Y4 STRING:Q9C5Y4 PaxDb:Q9C5Y4
PRIDE:Q9C5Y4 EnsemblPlants:AT5G62410.1 GeneID:836362
KEGG:ath:AT5G62410 TAIR:At5g62410 HOGENOM:HOG000163792
InParanoid:Q9C5Y4 OMA:CQNGKIP PhylomeDB:Q9C5Y4
ProtClustDB:CLSN2685173 Genevestigator:Q9C5Y4 Uniprot:Q9C5Y4
Length = 1175
Score = 135 (52.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/75 (42%), Positives = 51/75 (68%)
Query: 90 ENPEEP-YLQGVNYNCVAPGKRF-QPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEI 147
E PE+ +L G+ VA GK + Q ++ LSGG++++ AL+L+ A+ + PAP ++LDE+
Sbjct: 1055 EPPEDGNFLDGLEVR-VAFGKVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEV 1113
Query: 148 DAALD---NTNIGKV 159
DAALD NIG++
Sbjct: 1114 DAALDLSHTQNIGRM 1128
>UNIPROTKB|O97594 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=ISS] [GO:0006275
"regulation of DNA replication" evidence=ISS] [GO:0000922 "spindle
pole" evidence=ISS] [GO:0007165 "signal transduction" evidence=ISS]
[GO:0016363 "nuclear matrix" evidence=ISS] [GO:0007052 "mitotic
spindle organization" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0045502 "dynein binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051276 "chromosome organization" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0006275 GO:GO:0006281 GO:GO:0000785
GO:GO:0016363 GO:GO:0000922 GO:GO:0051276 GO:GO:0045502
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
KO:K06669 EMBL:AF072713 IPI:IPI00698576 RefSeq:NP_776720.1
UniGene:Bt.5290 ProteinModelPortal:O97594 STRING:O97594
PRIDE:O97594 GeneID:281729 KEGG:bta:281729 CTD:9126
HOVERGEN:HBG039849 InParanoid:O97594 OrthoDB:EOG4B5P4C
NextBio:20805649 Uniprot:O97594
Length = 1218
Score = 135 (52.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/69 (44%), Positives = 41/69 (59%)
Query: 88 GPEN--PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFV 143
GP++ P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++
Sbjct: 1083 GPQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYL 1142
Query: 144 LDEIDAALD 152
DEID ALD
Sbjct: 1143 FDEIDQALD 1151
>WB|WBGene00004873 [details] [associations]
symbol:smc-3 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040002 "collagen and cuticulin-based cuticle
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0007109 "cytokinesis, completion of separation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0008278 "cohesin complex" evidence=IDA;IPI]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=NAS] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040010 GO:GO:0007059 GO:GO:0005819
GO:GO:0004674 GO:GO:0040011 GO:GO:0000790 GO:GO:0040035
GO:GO:0000794 GO:GO:0030261 GO:GO:0007109 GO:GO:0040002
GO:GO:0008278 EMBL:AL117202 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
GeneTree:ENSGT00580000081628 RefSeq:NP_001129842.1
ProteinModelPortal:B2FDA8 SMR:B2FDA8 STRING:B2FDA8 PaxDb:B2FDA8
EnsemblMetazoa:Y47D3A.26b.1 EnsemblMetazoa:Y47D3A.26b.2
GeneID:176559 KEGG:cel:CELE_Y47D3A.26 CTD:176559
WormBase:Y47D3A.26b InParanoid:B2FDA8 NextBio:893080
ArrayExpress:B2FDA8 Uniprot:B2FDA8
Length = 1261
Score = 134 (52.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 114 MTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI 163
MT LSGG+K++ ALA++F+I PAPF++ DEIDAALD + VA I
Sbjct: 1156 MTQLSGGQKSLVALAIIFSIQKCDPAPFYLFDEIDAALDAQHRKSVADMI 1205
>UNIPROTKB|F2Z5G2 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0000800
"lateral element" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0007052 GO:GO:0000785 GO:GO:0016363 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0000800 SUPFAM:SSF75553
GO:GO:0030893 OMA:NKVLEHF GeneTree:ENSGT00580000081628
EMBL:CT737341 EMBL:CU468424 Ensembl:ENSSSCT00000011621
Uniprot:F2Z5G2
Length = 934
Score = 130 (50.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 805 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 864
Query: 150 ALD 152
ALD
Sbjct: 865 ALD 867
>SGD|S000001927 [details] [associations]
symbol:SMC2 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003680 "AT DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0000799 "nuclear condensin complex"
evidence=ISS;TAS;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;IMP;TAS]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0000217 "DNA secondary
structure binding" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 SGD:S000001927 Pfam:PF02463 GO:GO:0005739
GO:GO:0005524 GO:GO:0051301 GO:GO:0006281 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0007076
GO:GO:0003680 GO:GO:0000799 GO:GO:0070058 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:U05820
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
GO:GO:0000217 HOGENOM:HOG000163792 OrthoDB:EOG4P2T9B PIR:A56157
RefSeq:NP_116687.1 ProteinModelPortal:P38989 SMR:P38989
DIP:DIP-2983N IntAct:P38989 MINT:MINT-435495 STRING:P38989
PaxDb:P38989 EnsemblFungi:YFR031C GeneID:850589 KEGG:sce:YFR031C
CYGD:YFR031c OMA:SECESAE NextBio:966434 Genevestigator:P38989
GermOnline:YFR031C Uniprot:P38989
Length = 1170
Score = 116 (45.9 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 112 QPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD---NTNIG 157
+ + LSGG++++ AL+L+ A+ + PAP ++LDE+DAALD NIG
Sbjct: 1079 ESLIELSGGQRSLIALSLIMALLQFRPAPMYILDEVDAALDLSHTQNIG 1127
Score = 53 (23.7 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 35 RFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
+F +T L+G K+ + A+ + I ++T+R+ L+DL
Sbjct: 26 QFNAITGLNGSGKSNILDAICFVLGIASMSTVRASSLQDL 65
Score = 34 (17.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 33 GKRFQPMTNLSGGEKTVAALALLFAIHRIATIR 65
G + P LSGG + + +LL I + I+
Sbjct: 656 GDVYDPEGTLSGGSRNTSE-SLLVDIQKYNQIQ 687
>CGD|CAL0000340 [details] [associations]
symbol:SMC2 species:5476 "Candida albicans" [GO:0003680 "AT
DNA binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0000939 "condensed chromosome inner kinetochore" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000799 "nuclear condensin complex" evidence=IEA]
[GO:0070058 "tRNA gene clustering" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0000340
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:AACQ01000103 EMBL:AACQ01000102
KO:K06674 PANTHER:PTHR18937:SF9 RefSeq:XP_714465.1
RefSeq:XP_714514.1 ProteinModelPortal:Q59Y26 STRING:Q59Y26
GeneID:3643867 GeneID:3643918 KEGG:cal:CaO19.11106
KEGG:cal:CaO19.3623 Uniprot:Q59Y26
Length = 1171
Score = 116 (45.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 112 QPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD---NTNIG 157
+ + LSGG++++ AL+L+ A+ + PAP ++LDE+DAALD NIG
Sbjct: 1080 ESLVELSGGQRSLIALSLIMALLQFKPAPMYILDEVDAALDLSHTQNIG 1128
Score = 53 (23.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 35 RFQPMTNLSGGEKT--VAALALLFAIHRIATIRSLGLEDL 72
+F +T L+G K+ + A+ + I ++T+R+ L+DL
Sbjct: 26 QFNAITGLNGSGKSNILDAICFVLGIASMSTVRASNLQDL 65
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 33 GKRFQPMTNLSGGEKTVAALALL 55
G + P NLSGG + + LL
Sbjct: 657 GDIYDPEGNLSGGSRRNNSTILL 679
>RGD|62006 [details] [associations]
symbol:Smc3 "structural maintenance of chromosomes 3"
species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=ISO;ISS] [GO:0000800 "lateral element" evidence=ISO]
[GO:0000922 "spindle pole" evidence=ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006275 "regulation of DNA
replication" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=ISO;ISS] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007067 "mitosis" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO;ISS] [GO:0007165 "signal transduction"
evidence=ISO;ISS] [GO:0016363 "nuclear matrix" evidence=ISO;ISS]
[GO:0019827 "stem cell maintenance" evidence=ISO] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0034991
"nuclear meiotic cohesin complex" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0045502 "dynein
binding" evidence=ISO;ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:62006 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0006275 GO:GO:0006281 GO:GO:0000785 GO:GO:0016363
GO:GO:0005604 GO:GO:0000922 GO:GO:0051276 GO:GO:0045502
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
HOVERGEN:HBG039849 EMBL:U82626 IPI:IPI00201289 UniGene:Rn.11074
ProteinModelPortal:P97690 STRING:P97690 PhosphoSite:P97690
PRIDE:P97690 UCSC:RGD:62006 ArrayExpress:P97690
Genevestigator:P97690 GermOnline:ENSRNOG00000014173 Uniprot:P97690
Length = 1191
Score = 130 (50.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1088 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1147
Query: 150 ALD 152
ALD
Sbjct: 1148 ALD 1150
>UNIPROTKB|P97690 [details] [associations]
symbol:Smc3 "Structural maintenance of chromosomes protein
3" species:10116 "Rattus norvegicus" [GO:0051276 "chromosome
organization" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 RGD:62006
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0051301 GO:GO:0007067 GO:GO:0007052 GO:GO:0006275
GO:GO:0006281 GO:GO:0000785 GO:GO:0016363 GO:GO:0005604
GO:GO:0000922 GO:GO:0051276 GO:GO:0045502 eggNOG:COG1196
SUPFAM:SSF75553 GO:GO:0030893 HOGENOM:HOG000166512
HOVERGEN:HBG039849 EMBL:U82626 IPI:IPI00201289 UniGene:Rn.11074
ProteinModelPortal:P97690 STRING:P97690 PhosphoSite:P97690
PRIDE:P97690 UCSC:RGD:62006 ArrayExpress:P97690
Genevestigator:P97690 GermOnline:ENSRNOG00000014173 Uniprot:P97690
Length = 1191
Score = 130 (50.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1088 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1147
Query: 150 ALD 152
ALD
Sbjct: 1148 ALD 1150
>UNIPROTKB|O93309 [details] [associations]
symbol:smc3 "Structural maintenance of chromosomes protein
3" species:8355 "Xenopus laevis" [GO:0000785 "chromatin"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=ISS]
[GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000775 GO:GO:0051301 GO:GO:0007067 GO:GO:0006275
GO:GO:0006281 GO:GO:0000785 GO:GO:0051276 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039849 EMBL:BC094474 EMBL:AF051785
UniGene:Xl.290 UniGene:Xl.75355 ProteinModelPortal:O93309
IntAct:O93309 Uniprot:O93309
Length = 1209
Score = 130 (50.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1080 PSVDQFTGVGIRVSFTGKQAEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1139
Query: 150 ALD 152
ALD
Sbjct: 1140 ALD 1142
>UNIPROTKB|G3N365 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
GeneTree:ENSGT00580000081628 EMBL:DAAA02059205
Ensembl:ENSBTAT00000063829 Uniprot:G3N365
Length = 1216
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1087 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1146
Query: 150 ALD 152
ALD
Sbjct: 1147 ALD 1149
>ZFIN|ZDB-GENE-030131-3196 [details] [associations]
symbol:smc3 "structural maintenance of chromosomes
3" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IMP] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-030131-3196 GO:GO:0005524 GO:GO:0005694 HSSP:P58301
GO:GO:0007064 SUPFAM:SSF75553 KO:K06669 CTD:9126 HOVERGEN:HBG039849
EMBL:BC044408 IPI:IPI00616384 RefSeq:NP_999854.1 UniGene:Dr.24937
ProteinModelPortal:Q803N2 STRING:Q803N2 PRIDE:Q803N2 GeneID:324475
KEGG:dre:324475 InParanoid:Q803N2 NextBio:20808789
ArrayExpress:Q803N2 Bgee:Q803N2 Uniprot:Q803N2
Length = 1216
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1087 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1146
Query: 150 ALD 152
ALD
Sbjct: 1147 ALD 1149
>UNIPROTKB|F1NEA6 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0051276 SUPFAM:SSF75553 GeneTree:ENSGT00580000081628
EMBL:AADN02030887 EMBL:AADN02030888 IPI:IPI00684346
Ensembl:ENSGALT00000033118 ArrayExpress:F1NEA6 Uniprot:F1NEA6
Length = 1217
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1088 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1147
Query: 150 ALD 152
ALD
Sbjct: 1148 ALD 1150
>UNIPROTKB|A7Z065 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9913 "Bos taurus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0007052 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 GO:GO:0030893 OMA:NKVLEHF IPI:IPI00698576
UniGene:Bt.5290 HOVERGEN:HBG039849 GeneTree:ENSGT00580000081628
EMBL:DAAA02059205 EMBL:BC153263 SMR:A7Z065 STRING:A7Z065
Ensembl:ENSBTAT00000046231 InParanoid:A7Z065 Uniprot:A7Z065
Length = 1217
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1088 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1147
Query: 150 ALD 152
ALD
Sbjct: 1148 ALD 1150
>UNIPROTKB|E2R7T4 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553 KO:K06669 OMA:NKVLEHF
CTD:9126 GeneTree:ENSGT00580000081628 EMBL:AAEX03015526
RefSeq:XP_851818.2 ProteinModelPortal:E2R7T4
Ensembl:ENSCAFT00000017137 GeneID:486886 KEGG:cfa:486886
Uniprot:E2R7T4
Length = 1217
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1088 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1147
Query: 150 ALD 152
ALD
Sbjct: 1148 ALD 1150
>UNIPROTKB|Q9UQE7 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IEA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IEA] [GO:0036033
"mediator complex binding" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0007052 "mitotic spindle organization"
evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=IMP;NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0008278 "cohesin complex"
evidence=NAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007165 "signal transduction" evidence=IDA]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0007126 "meiosis" evidence=IDA]
[GO:0006275 "regulation of DNA replication" evidence=IMP]
[GO:0000785 "chromatin" evidence=IDA] [GO:0030893 "meiotic cohesin
complex" evidence=IDA] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0007067 "mitosis" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007091 "metaphase/anaphase
transition of mitotic cell cycle" evidence=TAS] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0007165 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0000775 GO:GO:0051301 GO:GO:0007052
EMBL:CH471066 GO:GO:0006281 GO:GO:0000785 Reactome:REACT_111183
GO:GO:0016363 GO:GO:0005604 GO:GO:0000922 GO:GO:0003777
GO:GO:0032876 GO:GO:0007091 GO:GO:0000236 GO:GO:0045502
GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
Orphanet:199 GO:GO:0030893 EMBL:AL359260 HOGENOM:HOG000166512
KO:K06669 OMA:NKVLEHF CTD:9126 HOVERGEN:HBG039849 OrthoDB:EOG4B5P4C
EMBL:AF020043 EMBL:AK289771 EMBL:AF067163 EMBL:AJ005015
IPI:IPI00219420 RefSeq:NP_005436.1 UniGene:Hs.24485
ProteinModelPortal:Q9UQE7 SMR:Q9UQE7 DIP:DIP-29200N IntAct:Q9UQE7
MINT:MINT-3083875 STRING:Q9UQE7 PhosphoSite:Q9UQE7 DMDM:29337005
PaxDb:Q9UQE7 PRIDE:Q9UQE7 Ensembl:ENST00000361804 GeneID:9126
KEGG:hsa:9126 UCSC:uc001kze.3 GeneCards:GC10P112318 HGNC:HGNC:2468
HPA:HPA037411 MIM:606062 MIM:610759 neXtProt:NX_Q9UQE7
PharmGKB:PA26966 InParanoid:Q9UQE7 ChiTaRS:SMC3 GenomeRNAi:9126
NextBio:34209 Bgee:Q9UQE7 CleanEx:HS_SMC3 Genevestigator:Q9UQE7
GermOnline:ENSG00000108055 Uniprot:Q9UQE7
Length = 1217
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1088 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1147
Query: 150 ALD 152
ALD
Sbjct: 1148 ALD 1150
>UNIPROTKB|Q5R4K5 [details] [associations]
symbol:SMC3 "Structural maintenance of chromosomes protein
3" species:9601 "Pongo abelii" [GO:0000785 "chromatin"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0030893 "meiotic cohesin complex" evidence=ISS]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0051301 GO:GO:0007067 GO:GO:0007052
GO:GO:0006275 GO:GO:0006281 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 GO:GO:0030893 KO:K06669 OMA:NKVLEHF CTD:9126
HOVERGEN:HBG039849 GeneTree:ENSGT00580000081628 EMBL:CR861241
RefSeq:NP_001126947.1 UniGene:Pab.18502 ProteinModelPortal:Q5R4K5
SMR:Q5R4K5 PRIDE:Q5R4K5 Ensembl:ENSPPYT00000003185 GeneID:100173965
KEGG:pon:100173965 InParanoid:Q5R4K5 Uniprot:Q5R4K5
Length = 1217
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1088 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1147
Query: 150 ALD 152
ALD
Sbjct: 1148 ALD 1150
>MGI|MGI:1339795 [details] [associations]
symbol:Smc3 "structural maintenance of chromosomes 3"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000785 "chromatin" evidence=ISO] [GO:0000800
"lateral element" evidence=IDA] [GO:0000922 "spindle pole"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006275 "regulation of DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0016363 "nuclear matrix" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=IMP] [GO:0030893 "meiotic cohesin complex"
evidence=ISO;IDA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IDA] [GO:0036033 "mediator complex
binding" evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 MGI:MGI:1339795 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0005654 GO:GO:0000775 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0006275 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0016363 GO:GO:0005604 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0019827 GO:GO:0045502
GO:GO:0000800 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0036033
GO:GO:0034991 PDB:2WD5 PDBsum:2WD5 HOGENOM:HOG000166512 KO:K06669
OMA:NKVLEHF CTD:9126 HOVERGEN:HBG039849 OrthoDB:EOG4B5P4C
ChiTaRS:SMC3 EMBL:AF141294 EMBL:AF047601 EMBL:Y15128 EMBL:AK005647
IPI:IPI00132122 RefSeq:NP_031816.2 UniGene:Mm.14910
ProteinModelPortal:Q9CW03 SMR:Q9CW03 DIP:DIP-57028N IntAct:Q9CW03
STRING:Q9CW03 PhosphoSite:Q9CW03 PaxDb:Q9CW03 PRIDE:Q9CW03
Ensembl:ENSMUST00000025930 GeneID:13006 KEGG:mmu:13006
GeneTree:ENSGT00580000081628 InParanoid:Q9CW03
EvolutionaryTrace:Q9CW03 NextBio:282832 Bgee:Q9CW03 CleanEx:MM_SMC3
Genevestigator:Q9CW03 GermOnline:ENSMUSG00000024974 Uniprot:Q9CW03
Length = 1217
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1088 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1147
Query: 150 ALD 152
ALD
Sbjct: 1148 ALD 1150
>UNIPROTKB|D4A1B9 [details] [associations]
symbol:Smc3 "Structural maintenance of chromosomes protein
3" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0036033 "mediator complex
binding" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051276 "chromosome organization" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:62006 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0007165 GO:GO:0007052 GO:GO:0000785 GO:GO:0016363
GO:GO:0000922 GO:GO:0032876 GO:GO:0051276 GO:GO:0000800
SUPFAM:SSF75553 EMBL:CH473986 GO:GO:0030893 KO:K06669 CTD:9126
OrthoDB:EOG4B5P4C GeneTree:ENSGT00580000081628 UniGene:Rn.11074
IPI:IPI00780283 RefSeq:NP_113771.2 SMR:D4A1B9
Ensembl:ENSRNOT00000019560 GeneID:29486 KEGG:rno:29486
NextBio:609354 Uniprot:D4A1B9
Length = 1217
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1088 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1147
Query: 150 ALD 152
ALD
Sbjct: 1148 ALD 1150
>UNIPROTKB|F1NYB2 [details] [associations]
symbol:SMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007052 "mitotic spindle organization" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0005737 GO:GO:0007165
GO:GO:0007052 GO:GO:0000785 GO:GO:0016363 GO:GO:0000922
GO:GO:0032876 GO:GO:0051276 GO:GO:0000800 SUPFAM:SSF75553
GO:GO:0030893 OMA:NKVLEHF GeneTree:ENSGT00580000081628
EMBL:AADN02030887 EMBL:AADN02030888 IPI:IPI00598955
Ensembl:ENSGALT00000013979 ArrayExpress:F1NYB2 Uniprot:F1NYB2
Length = 1219
Score = 130 (50.8 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 92 PEEPYLQGVNYNCVAPGKR--FQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDA 149
P GV GK+ + M LSGG+K++ ALAL+FAI PAPF++ DEID
Sbjct: 1090 PSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQ 1149
Query: 150 ALD 152
ALD
Sbjct: 1150 ALD 1152
>FB|FBgn0015615 [details] [associations]
symbol:Cap "Chromosome-associated protein" species:7227
"Drosophila melanogaster" [GO:0008278 "cohesin complex"
evidence=ISS;NAS] [GO:0007062 "sister chromatid cohesion"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0001737 "establishment of imaginal
disc-derived wing hair orientation" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0022008 GO:GO:0046331
GO:GO:0051276 GO:GO:0001737 GO:GO:0008278 eggNOG:COG1196
SUPFAM:SSF75553 HSSP:Q9X0R4 EMBL:U30492 PIR:S70553
ProteinModelPortal:Q24098 SMR:Q24098 STRING:Q24098 PaxDb:Q24098
PRIDE:Q24098 FlyBase:FBgn0015615 InParanoid:Q24098
OrthoDB:EOG4KKWHV ArrayExpress:Q24098 Bgee:Q24098 Uniprot:Q24098
Length = 1231
Score = 128 (50.1 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 99 GVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGK 158
G+ + + M LSGG+K++ ALAL+F+I PAPF++ DEID ALD +
Sbjct: 1111 GIRVSFTGVEAEMREMNQLSGGQKSLVALALIFSIQKCDPAPFYLFDEIDQALDAMHRKA 1170
Query: 159 VASYI 163
VA+ I
Sbjct: 1171 VANMI 1175
>ASPGD|ASPL0000008486 [details] [associations]
symbol:sudA species:162425 "Emericella nidulans"
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0000785
"chromatin" evidence=ISS] [GO:0007067 "mitosis" evidence=IGI;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008278
"cohesin complex" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0051301 GO:GO:0007067
EMBL:AACD01000107 EMBL:BN001301 GO:GO:0051276 eggNOG:COG1196
SUPFAM:SSF75553 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
OrthoDB:EOG4TB7KF EMBL:U40146 PIR:S65799 RefSeq:XP_663968.1
ProteinModelPortal:Q00737 STRING:Q00737 GeneID:2871258
KEGG:ani:AN6364.2 Uniprot:Q00737
Length = 1215
Score = 122 (48.0 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 112 QPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD 152
Q + LSGG+K++ ALAL+FAI + PAPF++ DEIDA LD
Sbjct: 1108 QRIQQLSGGQKSLCALALVFAIQACDPAPFYLFDEIDANLD 1148
>DICTYBASE|DDB_G0284499 [details] [associations]
symbol:smc2 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA;ISS] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0284499 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 EMBL:AAFI02000066 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HSSP:P32908 OMA:CQNGKIP RefSeq:XP_638528.1
ProteinModelPortal:Q54PK4 STRING:Q54PK4 PRIDE:Q54PK4
EnsemblProtists:DDB0219933 GeneID:8624621 KEGG:ddi:DDB_G0284499
ProtClustDB:CLSZ2430256 Uniprot:Q54PK4
Length = 1184
Score = 117 (46.2 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 89 PENPEEPYLQGVNYNCVAPGKRF-QPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEI 147
PE E L G+ VA G + + ++ LSGG+K++ AL+L+ ++ + PAP ++LDEI
Sbjct: 1059 PEGQNE--LFGLEVK-VAFGDVWKETLSELSGGQKSLLALSLILSLLLFKPAPMYILDEI 1115
Query: 148 DAALD---NTNIG 157
DAALD NIG
Sbjct: 1116 DAALDLSHTQNIG 1128
Score = 37 (18.1 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 14/66 (21%), Positives = 27/66 (40%)
Query: 22 LQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHRIATIRSLGLEDLRSMALAQNQ 81
L G+ +N P K F + + G VA L L + + L ++ + ++
Sbjct: 503 LSGLEFNYTDPSKSFD-RSKVKG---IVANLITLKDVETATALEICASGKLYNIVIEDDE 558
Query: 82 SAQAFL 87
+ +A L
Sbjct: 559 TGKALL 564
Score = 36 (17.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 33 GKRFQPMTNLSGGEKTVAALALLFAIHRI 61
G + P +L+GG + + ++L I R+
Sbjct: 654 GDEYNPAGSLTGGSRPPSG-SILTQIQRL 681
>CGD|CAL0004031 [details] [associations]
symbol:SMC3 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0030437 "ascospore formation" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0007064 "mitotic sister chromatid cohesion" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
EMBL:AACQ01000026 SUPFAM:SSF75553 KO:K06669 RefSeq:XP_720093.1
ProteinModelPortal:Q5AEZ0 STRING:Q5AEZ0 GeneID:3638190
KEGG:cal:CaO19.7895 CGD:CAL0062457 Uniprot:Q5AEZ0
Length = 1240
Score = 118 (46.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 112 QPMTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALD 152
Q + LSGG+K++ A+AL+FAI + PAPF++ DEID+ LD
Sbjct: 1116 QRIEQLSGGQKSLCAIALIFAIQNCDPAPFYLFDEIDSNLD 1156
>SGD|S000003610 [details] [associations]
symbol:SMC3 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0007130 "synaptonemal
complex assembly" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IMP] [GO:0051276 "chromosome organization"
evidence=IEA] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 SGD:S000003610 Pfam:PF02463
GO:GO:0005524 GO:GO:0051301 EMBL:BK006943 GO:GO:0016887 EMBL:X88851
GO:GO:0030437 GO:GO:0007131 GO:GO:0007130 GO:GO:0007064
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0051177 GO:GO:0034990
HOGENOM:HOG000166512 KO:K06669 GeneTree:ENSGT00580000081628
OrthoDB:EOG4TB7KF EMBL:Y14278 EMBL:Z49349 PIR:S56850
RefSeq:NP_012461.1 ProteinModelPortal:P47037 SMR:P47037
DIP:DIP-2991N IntAct:P47037 MINT:MINT-435389 STRING:P47037
PaxDb:P47037 PeptideAtlas:P47037 EnsemblFungi:YJL074C GeneID:853371
KEGG:sce:YJL074C CYGD:YJL074c OMA:NIRMENI NextBio:973810
Genevestigator:P47037 GermOnline:YJL074C Uniprot:P47037
Length = 1230
Score = 117 (46.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 117 LSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI 163
LSGG+KTV A+AL+ AI PA F++ DEIDAALD VA+ +
Sbjct: 1126 LSGGQKTVCAIALILAIQMVDPASFYLFDEIDAALDKQYRTAVATLL 1172
>WB|WBGene00003367 [details] [associations]
symbol:mix-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0042464 "dosage
compensation by hypoactivation of X chromosome" evidence=IMP]
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000775
"chromosome, centromeric region" evidence=IDA] [GO:0046536 "dosage
compensation complex" evidence=IPI] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0000775
GO:GO:0051301 GO:GO:0002119 GO:GO:0040039 GO:GO:0000793
GO:GO:0007076 EMBL:Z46935 GO:GO:0042464 eggNOG:COG1196
GO:GO:0046536 SUPFAM:SSF75553 EMBL:U96387 PIR:T23744 PIR:T23981
RefSeq:NP_496331.1 UniGene:Cel.8608 ProteinModelPortal:Q09591
SMR:Q09591 IntAct:Q09591 STRING:Q09591 PaxDb:Q09591
EnsemblMetazoa:M106.1 GeneID:174669 KEGG:cel:CELE_M106.1
UCSC:M106.1 CTD:174669 WormBase:M106.1 GeneTree:ENSGT00550000074857
HOGENOM:HOG000016791 InParanoid:Q09591 KO:K06674 OMA:KSYQKHT
NextBio:884988 PANTHER:PTHR18937:SF9 Uniprot:Q09591
Length = 1244
Score = 116 (45.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 83 AQAFLGPENPE-EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPF 141
A A L P PE + +G+ G + LSGG++++ AL+L+ A+ + PAP
Sbjct: 1067 AHASLVP--PEGKTVCEGLEVKVSFGGVVKDSLHELSGGQRSLVALSLILAMLKFKPAPL 1124
Query: 142 FVLDEIDAALD---NTNIG 157
++LDE+DAALD NIG
Sbjct: 1125 YILDEVDAALDLSHTANIG 1143
>UNIPROTKB|Q09591 [details] [associations]
symbol:mix-1 "Mitotic chromosome and
X-chromosome-associated protein mix-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0009792
GO:GO:0000775 GO:GO:0051301 GO:GO:0002119 GO:GO:0040039
GO:GO:0000793 GO:GO:0007076 EMBL:Z46935 GO:GO:0042464
eggNOG:COG1196 GO:GO:0046536 SUPFAM:SSF75553 EMBL:U96387 PIR:T23744
PIR:T23981 RefSeq:NP_496331.1 UniGene:Cel.8608
ProteinModelPortal:Q09591 SMR:Q09591 IntAct:Q09591 STRING:Q09591
PaxDb:Q09591 EnsemblMetazoa:M106.1 GeneID:174669
KEGG:cel:CELE_M106.1 UCSC:M106.1 CTD:174669 WormBase:M106.1
GeneTree:ENSGT00550000074857 HOGENOM:HOG000016791 InParanoid:Q09591
KO:K06674 OMA:KSYQKHT NextBio:884988 PANTHER:PTHR18937:SF9
Uniprot:Q09591
Length = 1244
Score = 116 (45.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 83 AQAFLGPENPE-EPYLQGVNYNCVAPGKRFQPMTNLSGGEKTVAALALLFAIHSYHPAPF 141
A A L P PE + +G+ G + LSGG++++ AL+L+ A+ + PAP
Sbjct: 1067 AHASLVP--PEGKTVCEGLEVKVSFGGVVKDSLHELSGGQRSLVALSLILAMLKFKPAPL 1124
Query: 142 FVLDEIDAALD---NTNIG 157
++LDE+DAALD NIG
Sbjct: 1125 YILDEVDAALDLSHTANIG 1143
>POMBASE|SPAC10F6.09c [details] [associations]
symbol:psm3 "mitotic cohesin complex subunit Psm3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000794 "condensed nuclear chromosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005694 "chromosome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0008278 "cohesin complex" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISM] [GO:0030892 "mitotic cohesin
complex" evidence=NAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 PomBase:SPAC10F6.09c Pfam:PF02463
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0016567 GO:GO:0000790
GO:GO:0000794 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030892 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF PIR:T37503
RefSeq:NP_593260.1 ProteinModelPortal:O42649 IntAct:O42649
STRING:O42649 EnsemblFungi:SPAC10F6.09c.1 GeneID:2543010
KEGG:spo:SPAC10F6.09c OrthoDB:EOG4TB7KF NextBio:20804043
Uniprot:O42649
Length = 1194
Score = 111 (44.1 bits), Expect = 0.00048, P = 0.00048
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 114 MTNLSGGEKTVAALALLFAIHSYHPAPFFVLDEIDAALDNTNIGKVASYI 163
+ LSGG+K++ AL L+FAI PAPF +LDE DA LD +A+ +
Sbjct: 1094 INQLSGGQKSLCALTLIFAIQRCDPAPFNILDECDANLDAQYRSAIAAMV 1143
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 163 163 0.00084 107 3 11 22 0.39 32
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 114
No. of states in DFA: 529 (56 KB)
Total size of DFA: 119 KB (2077 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 14.51u 0.08s 14.59t Elapsed: 00:00:09
Total cpu time: 14.52u 0.08s 14.60t Elapsed: 00:00:10
Start: Thu Aug 15 15:06:49 2013 End: Thu Aug 15 15:06:59 2013
WARNINGS ISSUED: 1