RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17528
(366 letters)
>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 361
Score = 60.2 bits (145), Expect = 1e-10
Identities = 46/280 (16%), Positives = 77/280 (27%), Gaps = 85/280 (30%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
I ITG GF+GS +V +++ + ++ I + + + ++
Sbjct: 3 ILITGGAGFIGSAVVRHIIK---NTQDTVVNIDKLTYAGNLESLSDISESNRYNFE---- 55
Query: 111 PNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEELL 170
DI + + F D
Sbjct: 56 -----HADICDSAEITRIFEQYQPD----------------------------------- 75
Query: 171 ISQTTIIFHIAATVRFDEHIR---TAYNINVKGTQTILALAKRM--------KGLKSFVH 219
+ H+AA D I N+ GT +L +A++ K F H
Sbjct: 76 -----AVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHH 130
Query: 220 VSTAYCNCDRKFIAEKFYPPVFTAEELSALVAHASDEEIALLNEHIIGGKPNSYTLTKAT 279
+ST D E E + Y+ +KA+
Sbjct: 131 ISTDEVYGDLPHPDEVENSVTLPLFT-----------------ETTAYAPSSPYSASKAS 173
Query: 280 AEDLVRQVGHE--LPICVLRPSIVFPTLQEP---MPLWIK 314
++ LVR LP V S + P +PL I
Sbjct: 174 SDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVIL 213
>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 312
Score = 56.2 bits (135), Expect = 1e-09
Identities = 51/319 (15%), Positives = 86/319 (26%), Gaps = 101/319 (31%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
I ITG GF+GS L +KL+ ++ V D
Sbjct: 4 ILITGGAGFVGSHLTDKLMMDGHEVT-------------------------VVDNF---F 35
Query: 111 PNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEELL 170
V+ I H + N V + + +E
Sbjct: 36 TGRKRNVEHWIGHENFELINHDVVEPLYIEV----------------------------- 66
Query: 171 ISQTTIIFHIAATVRFDEHIR---TAYNINVKGTQTILALAKRMKGLKSFVHVSTA--YC 225
I+H+A+ ++ N GT +L LAKR+ + ST+ Y
Sbjct: 67 ----DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYG 120
Query: 226 NCDRKFIAEKFYPPVFTAEELSALVAHASDEEIALLNEHIIGGKPNSYTLTKATAEDLVR 285
+ + +E ++ V + Y K AE +
Sbjct: 121 DPEVHPQSEDYWGHVNPIGPRAC------------------------YDEGKRVAETMCY 156
Query: 286 QVG--HELPICVLRPSIVF-PTLQEPMPLWIKGFNGVMALALGAGTGLIRVVQTDPNISM 342
+ + V R F P + + F L A G V + +
Sbjct: 157 AYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNF------ILQALQGEPLTVYGSGSQTR 210
Query: 343 DVVPGDRVINAMAALAWYF 361
++N + AL
Sbjct: 211 AFQYVSDLVNGLVALMNSN 229
>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli
[TaxId: 562]}
Length = 357
Score = 56.0 bits (134), Expect = 2e-09
Identities = 37/282 (13%), Positives = 66/282 (23%), Gaps = 80/282 (28%)
Query: 50 TIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLE 109
ITG TG GS L E LL ++ I R + FN D +
Sbjct: 3 VALITGVTGQDGSYLAEFLLEKGYEVHGIK-------------RRASSFNTERVDHIYQ- 48
Query: 110 CPNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEEL 169
D + ++ + D L + D V
Sbjct: 49 --------DPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVY----------------- 83
Query: 170 LISQTTIIFHIAATVRFDEHIRTAYNINVKGTQTILALAKR--MKGLKSFVHVSTA--YC 225
+ ++ E +++ GT +L + ++ F ST+ Y
Sbjct: 84 ------NLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYG 137
Query: 226 NCDRKFIAEKFYPPVFTAEELSALVAHASDEEIALLNEHIIGGKPNSYTLTKATAEDLVR 285
E + + Y + K A +
Sbjct: 138 LVQEIPQKE----------------------------TTPFYPR-SPYAVAKLYAYWITV 168
Query: 286 QVGHE--LPICVLRPSIVFPTLQEPMPLWIKGFNGVMALALG 325
+ C + + K + +A G
Sbjct: 169 NYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQG 210
>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia
pseudotuberculosis [TaxId: 633]}
Length = 356
Score = 49.8 bits (117), Expect = 2e-07
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 45 FYKDQTIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFD 104
F++ + +F+TG TGF G L L ++ L T S T RV + + D
Sbjct: 5 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGD 64
>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 232
Score = 47.5 bits (111), Expect = 7e-07
Identities = 17/110 (15%), Positives = 39/110 (35%), Gaps = 3/110 (2%)
Query: 37 ETLSPIQEFYK--DQTIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRV 94
E LS ++E ++ ++++FI GA+G G +L++++L K+ L+ R + +
Sbjct: 1 EALSKLREDFRMQNKSVFILGASGETGRVLLKEILE-QGLFSKVTLIGRRKLTFDEEAYK 59
Query: 95 YNYFNDAVFDRMRLECPNYADKVDIGITHRVYNYFNDAVFDRMRLECPNY 144
F+++ + A
Sbjct: 60 NVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVL 109
>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose
epimerase/reductase (GDP-fucose synthetase) {Escherichia
coli [TaxId: 562]}
Length = 315
Score = 46.8 bits (110), Expect = 2e-06
Identities = 25/257 (9%), Positives = 61/257 (23%), Gaps = 100/257 (38%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
+FI G G +GS + +L + + V
Sbjct: 5 VFIAGHRGMVGSAIRRQLEQ-------------------------RGDVELVLRTR---- 35
Query: 111 PNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEELL 170
D++++ + V+++F +++D V
Sbjct: 36 ----DELNLLDSRAVHDFFAS--------------ERIDQVY------------------ 59
Query: 171 ISQTTIIFHIAATVRFDEHIRTAYNINVKGTQTILALAKRMKGLKSFVHVST--AYCNCD 228
+ V + + N+ I+ A + + + + + Y
Sbjct: 60 ----LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQ-NDVNKLLFLGSSCIYPKLA 114
Query: 229 RKFIAEKFYPPVFTAEELSALVAHASDEEIALLNEHIIGGKPNS-YTLTKATAEDLVRQV 287
++ +AE N Y + K L
Sbjct: 115 KQPMAESELLQGTLE-------------------------PTNEPYAIAKIAGIKLCESY 149
Query: 288 GHE--LPICVLRPSIVF 302
+ + P+ ++
Sbjct: 150 NRQYGRDYRSVMPTNLY 166
>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 341
Score = 46.9 bits (110), Expect = 2e-06
Identities = 25/176 (14%), Positives = 56/176 (31%), Gaps = 10/176 (5%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRM 106
+ + ITG GF+GS L+E LL+ ++ + L G V + ++ +
Sbjct: 15 QPKVWLITGVAGFIGSNLLETLLKLDQKV--VGLDNFATGHQRNLDEVRSLVSEKQWSNF 72
Query: 107 RLECPNYADKVDIGITHRVYNYFNDAVFD---RMRLECPNYADKVDIVCGQLEADTFGLS 163
+ + + D +Y + P ++ +I G L
Sbjct: 73 KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNID-GFLNMLIAARD 131
Query: 164 ARDEELLISQTTIIFHIAATVRFDE----HIRTAYNINVKGTQTILALAKRMKGLK 215
A+ + + ++ + + E + Y + + + R G
Sbjct: 132 AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFS 187
>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptomyces venezuelae [TaxId: 54571]}
Length = 322
Score = 46.0 bits (108), Expect = 3e-06
Identities = 44/272 (16%), Positives = 70/272 (25%), Gaps = 85/272 (31%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
+ +TG GF+GS V +LL + D V L
Sbjct: 3 LLVTGGAGFIGSHFVRQLLA---------------------GAYPDVPADEVIVLDSLTY 41
Query: 111 PNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEELL 170
+ + + + D L +
Sbjct: 42 AGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFA----------------- 84
Query: 171 ISQTTIIFHIAATVRFDEHIRTAYNINVKGTQTILALAKRMKGLKSFVHVS--TAYCNCD 228
+ R NV+GTQT+L A G+ VHVS Y + D
Sbjct: 85 --------AESHVDRSIAGASVFTETNVQGTQTLLQCAVD-AGVGRVVHVSTNQVYGSID 135
Query: 229 RKFIAEKFYPPVFTAEELSALVAHASDEEIALLNEHIIGGKPNS-YTLTKATAEDLVRQV 287
E +PNS Y +KA ++ + R
Sbjct: 136 SGSWTESSPL------------------------------EPNSPYAASKAGSDLVARAY 165
Query: 288 GHE--LPICVLRPSIVFPTLQEP---MPLWIK 314
L + + R + Q P +PL++
Sbjct: 166 HRTYGLDVRITRCCNNYGPYQHPEKLIPLFVT 197
>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 347
Score = 45.4 bits (106), Expect = 5e-06
Identities = 39/281 (13%), Positives = 64/281 (22%), Gaps = 79/281 (28%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
ITG TG GS L E LL ++
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGYEV----------------------------------- 28
Query: 111 PNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEELL 170
GI R ++ + + + + + G L T + +E
Sbjct: 29 --------HGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80
Query: 171 ISQTTIIFHIAATVRFDEHIRTAYNINVKGTQTILALAKR--MKGLKSFVHVSTA--YCN 226
+ + FD T +++ GT +L K + F ST+ Y
Sbjct: 81 TEIYNLGAQSHVKISFDLAEYT-ADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGK 139
Query: 227 CDRKFIAEKFYPPVFTAEELSALVAHASDEEIALLNEHIIGGKPNSYTLTKATAEDLVRQ 286
E + + Y K A +V
Sbjct: 140 VQEIPQKE----------------------------TTPFYPR-SPYGAAKLYAYWIVVN 170
Query: 287 VGHE--LPICVLRPSIVFPTLQEPMPLWIKGFNGVMALALG 325
L + + K V + LG
Sbjct: 171 FREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLG 211
>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces
salmonicolor [TaxId: 5005]}
Length = 342
Score = 43.3 bits (100), Expect = 3e-05
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+ + +TGA GF+ S +VE+LL
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLE 33
>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 212
Score = 42.4 bits (98), Expect = 3e-05
Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Query: 49 QTIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRL 108
+ + + GATG G L++++L P + K+I R + + ++
Sbjct: 3 KRVLLAGATGLTGEHLLDRILS-EPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDG 61
Query: 109 ECPNYADKVDIGITHRVYNYFNDAVFDRMRLECPNY 144
+ I AV + L
Sbjct: 62 SIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKR 97
>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240
(T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 252
Score = 42.9 bits (99), Expect = 3e-05
Identities = 14/106 (13%), Positives = 30/106 (28%), Gaps = 4/106 (3%)
Query: 50 TIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQ---RVYNYFNDAVFDRM 106
T+ +TGA+G G ++ +KL + L+R+ V+
Sbjct: 5 TVLVTGASGRTGQIVYKKLKEGSDKFV-AKGLVRSAQGKEKIGGEADVFIGDITDADSIN 63
Query: 107 RLECPNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVC 152
A + ++ F+ R + +
Sbjct: 64 PAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDW 109
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 41.7 bits (96), Expect = 9e-05
Identities = 29/264 (10%), Positives = 67/264 (25%), Gaps = 9/264 (3%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
I + GATG++G + + L ++ ++ Q + ++
Sbjct: 6 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 65
Query: 111 PNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEELL 170
+ + + V + A K + FG + +
Sbjct: 66 DHASLVEAVKNVDVVISTV--GSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAV 123
Query: 171 ISQTTIIFHIAATVRFDEHIRTAYNINVKGTQTILALAKRMKGLKSFVHVSTAYCNCDRK 230
++ A R E Y A + ++ +
Sbjct: 124 EPAKSVFEVKAKVRRAIEAEGIPYTYVSSNC-----FAGYFLRSLAQAGLTAPPRDKVVI 178
Query: 231 FIAEKFYPPVFTAEELSALVAHASDEEIALLNEHIIGGKPNSYTLTKATAEDLVRQVGHE 290
E++ A D+ L + N+ +L + +++
Sbjct: 179 LGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNEL-VALWEKKIDKT 237
Query: 291 LPICVLRPSIVFPTLQE-PMPLWI 313
L + V + + P P I
Sbjct: 238 LEKAYVPEEEVLKLIADTPFPANI 261
>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 363
Score = 41.5 bits (96), Expect = 1e-04
Identities = 31/274 (11%), Positives = 70/274 (25%), Gaps = 82/274 (29%)
Query: 43 QEFY--KDQTIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFND 100
++++ ++ I ITGA GF+ S + +L + +I + + D
Sbjct: 8 EQYWPSENLKISITGAGGFIASHIARRLKH---EGHYVIASDWKKN--------EHMTED 56
Query: 101 AVFDRMRLECPNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTF 160
D VD+ + + VD V
Sbjct: 57 MFCDEF--------HLVDLRVMENCLKVT----------------EGVDHVFNL------ 86
Query: 161 GLSARDEELLISQTTIIFHIAATVRFDEHIRTAYNINVKGTQTILALAKRMKGLKSFVHV 220
+ + N + ++ A R+ G+K F +
Sbjct: 87 ----------------AADMGGMGFIQSNHSVIMYNNTMISFNMIE-AARINGIKRFFYA 129
Query: 221 STAYCNCDRKFIAEKFYPPVFTAEELSALVAHASDEEIALLNEHIIGGKPNSYTLTKATA 280
S+A + K + + + +++ L K
Sbjct: 130 SSACIYPEFKQLETTNVSLKES--------------------DAWPAEPQDAFGLEKLAT 169
Query: 281 EDLVRQVGHE--LPICVLRPSIVFPTLQEPMPLW 312
E+L + + + + R ++
Sbjct: 170 EELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGR 203
>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Escherichia coli [TaxId:
562]}
Length = 338
Score = 39.9 bits (92), Expect = 3e-04
Identities = 30/194 (15%), Positives = 59/194 (30%), Gaps = 58/194 (29%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
+ +TG +G++GS +LL+ + IIL S+ +
Sbjct: 3 VLVTGGSGYIGSHTCVQLLQNGHDV--IILDNLCNSKRSVLPVIER-------------- 46
Query: 111 PNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEELL 170
+ + + + + + + +D V
Sbjct: 47 ----------LGGKHPTFVEGDIRNEALMTEILHDHAIDTV------------------- 77
Query: 171 ISQTTIIFHIAATVRFDEHIR---TAYNINVKGTQTILALAKRMKGLKSFVHVS--TAYC 225
H A E ++ Y+ NV GT +++ A R +K+F+ S T Y
Sbjct: 78 -------IHFAGLKAVGESVQKPLEYYDNNVNGTLRLIS-AMRAANVKNFIFSSSATVYG 129
Query: 226 NCDRKFIAEKFYPP 239
+ + E F
Sbjct: 130 DQPKIPYVESFPTG 143
>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA
{Aspergillus nidulans [TaxId: 162425]}
Length = 350
Score = 40.0 bits (92), Expect = 3e-04
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+ +TI + GATG G+ L+
Sbjct: 2 QKKTIAVVGATGRQGASLIRVAAA 25
>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 393
Score = 39.6 bits (90), Expect = 5e-04
Identities = 11/91 (12%), Positives = 23/91 (25%), Gaps = 4/91 (4%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
+ + G G+ G L + ++ + L+R + R +
Sbjct: 4 VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63
Query: 111 PNYAD----KVDIGITHRVYNYFNDAVFDRM 137
DI + F D +
Sbjct: 64 LTGKSIELYVGDICDFEFLAESFKSFEPDSV 94
>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB)
{Streptococcus suis, serotype 2 [TaxId: 1307]}
Length = 346
Score = 39.2 bits (90), Expect = 5e-04
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 50 TIFITGATGFLGSLLVEKLLRCCPQIRKIIL 80
I +TG GF+GS V + P + +L
Sbjct: 4 NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL 34
>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi
[TaxId: 90370]}
Length = 338
Score = 39.3 bits (90), Expect = 5e-04
Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 6/99 (6%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRV-----YNYFNDAVFDR 105
+ ITG GFLGS L L + L R G+T + + + + + ++
Sbjct: 3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK-GATDNLHWLSSLGNFEFVHGDIRNK 61
Query: 106 MRLECPNYADKVDIGITHRVYNYFNDAVFDRMRLECPNY 144
+ D ++ + N
Sbjct: 62 NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINV 100
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 339
Score = 39.3 bits (90), Expect = 6e-04
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 7/88 (7%)
Query: 50 TIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLE 109
ITG TG GS L E LL ++ +I +T +Y ++ M+L
Sbjct: 3 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN-FNTQRINHIYIDPHNVNKALMKL- 60
Query: 110 CPNYADKVDIGITHRVYNYFNDAVFDRM 137
D+ + + + D +
Sbjct: 61 -----HYADLTDASSLRRWIDVIKPDEV 83
>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 347
Score = 38.9 bits (89), Expect = 6e-04
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 50 TIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRV-------YNYFNDAV 102
+ +TG G++GS V +L+ ++ + + R+ ++ +
Sbjct: 3 IVLVTGGAGYIGSHTVVELIENGYDC--VVADNLSNSTYDSVARLEVLTKHHIPFYEVDL 60
Query: 103 FDRMRLECPNYADKVD 118
DR LE K+D
Sbjct: 61 CDRKGLEKVFKEYKID 76
>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant
arborvitae (Thuja plicata) [TaxId: 3316]}
Length = 312
Score = 38.2 bits (87), Expect = 0.001
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
K + I G TG++G +V +
Sbjct: 2 KKSRVLIVGGTGYIGKRIVNASIS 25
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 205
Score = 37.3 bits (85), Expect = 0.001
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 49 QTIFITGATGFLGSLLVEKLLR 70
+ I I GATG G + + ++
Sbjct: 4 KKIAIFGATGQTGLTTLAQAVQ 25
>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA
(PrmI) {Escherichia coli [TaxId: 562]}
Length = 342
Score = 37.6 bits (85), Expect = 0.002
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 51 IFITGATGFLGSLLVEKLLR 70
+ I G GF+G+ L E+LLR
Sbjct: 3 VLILGVNGFIGNHLTERLLR 22
>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 321
Score = 37.7 bits (86), Expect = 0.002
Identities = 35/314 (11%), Positives = 71/314 (22%), Gaps = 84/314 (26%)
Query: 50 TIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLE 109
+ +TG TG G+ L + LL +G
Sbjct: 2 SALVTGITGQDGAYLAKLLLE--------------KG----------------------- 24
Query: 110 CPNYADKVDIGITHRVYNYFNDA-VFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEE 168
+RV+ R RL + G + AD + +
Sbjct: 25 -------------YRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDM-ADACSVQRAVIK 70
Query: 169 LLISQTTIIFHIAATVRFDEHIRTAYNINVKGTQTILALAKRMKGLKSFVHVSTAYCNCD 228
+ + + T ++ G +L ++ F ST+
Sbjct: 71 AQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGL 130
Query: 229 RKFIAEKFYPPVFTAEELSALVAHASDEEIALLNEHIIGGKPNSYTLTKATAEDLVRQVG 288
+ + +E+ + Y + K +
Sbjct: 131 IQAERQ---------------------------DENTPFYPRSPYGVAKLYGHWITVNYR 163
Query: 289 HE--LPICVLRPSIVFPTLQEPMPLWIKGFNGVMALALGAGTGLIRVVQTDPNISMDVVP 346
L L+ + K + V + LG + + + D
Sbjct: 164 ESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLG---KQQELRLGNVDAKRDWGF 220
Query: 347 GDRVINAMAALAWY 360
+ AM +
Sbjct: 221 AGDYVEAMWLMLQQ 234
>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 346
Score = 37.4 bits (85), Expect = 0.002
Identities = 12/80 (15%), Positives = 25/80 (31%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
+ +TG G++GS V +LL I + + E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 111 PNYADKVDIGITHRVYNYFN 130
+ D+ + + Y++
Sbjct: 65 MDILDQGALQRLFKKYSFMA 84
>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase
(UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId:
5691]}
Length = 383
Score = 36.7 bits (83), Expect = 0.003
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 51 IFITGATGFLGSLLVEKLLR 70
+ + G G++GS V LLR
Sbjct: 5 VLVCGGAGYIGSHFVRALLR 24
>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase
{Escherichia coli [TaxId: 562]}
Length = 307
Score = 35.8 bits (80), Expect = 0.005
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 51 IFITGATGFLGSLLVEKLLR 70
I +TG GF+GS +V+ L
Sbjct: 2 IIVTGGAGFIGSNIVKALND 21
>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 281
Score = 36.0 bits (81), Expect = 0.006
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSIT--QRVYNYFNDAVFDRMRL 108
I ITGA G LG + ++L + + ++ IT V +FN+ + +
Sbjct: 4 ILITGANGQLGREIQKQLKG-----KNVEVIPTDVQDLDITNVLAVNKFFNEKKPNVVIN 58
Query: 109 ECPNYA 114
+ A
Sbjct: 59 CAAHTA 64
>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase
(RmlD) {Salmonella enterica serovar typhimurium [TaxId:
90371]}
Length = 298
Score = 34.9 bits (78), Expect = 0.010
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 51 IFITGATGFLGSLLVEKLLR 70
I + G TG +G L L
Sbjct: 3 ILLFGKTGQVGWELQRSLAP 22
>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde
dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}
Length = 183
Score = 33.8 bits (76), Expect = 0.015
Identities = 25/176 (14%), Positives = 48/176 (27%), Gaps = 11/176 (6%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
I + GA+G+ G+ +V +LL PQ +I ++ R + V+ + +
Sbjct: 8 IAVLGASGYTGAEIV-RLLANHPQF-RIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVK 65
Query: 111 PNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEELL 170
VD + + ++ +L
Sbjct: 66 DADFSNVDAVF----CCLPHGTTQEIIKGLPQELKIVDLSADFRLRDINEYAEWYGHSHR 121
Query: 171 ISQTTIIFHIAATVRFDEHIRTAYNINVKG---TQTILALA--KRMKGLKSFVHVS 221
+ T IR A + G + A+ M GL +
Sbjct: 122 APELQQEAVYGLTEVLRNEIRNARLVANPGLVKGASGQAVQNLNLMMGLPENTGLQ 177
>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 248
Score = 33.5 bits (75), Expect = 0.026
Identities = 17/94 (18%), Positives = 34/94 (36%)
Query: 50 TIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLE 109
+I ITG LG LV+ LL + + R R + + ++ + L
Sbjct: 4 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLR 63
Query: 110 CPNYADKVDIGITHRVYNYFNDAVFDRMRLECPN 143
+ DK+ I + + +F+ + +
Sbjct: 64 NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS 97
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st
ketoreductase module {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 259
Score = 30.7 bits (68), Expect = 0.24
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 43 QEFYKDQTIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRT 84
E+ T+ +TG TG +G + L R ++L+ R+
Sbjct: 4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGA--PHLLLVSRS 43
>d1of5b_ d.17.4.2 (B:) mRNA transport regulator MTR2 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 165
Score = 28.3 bits (63), Expect = 0.86
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 162 LSARDEELLISQTTIIFHIAATVRFDE 188
L+ D + T+I ++ VRFDE
Sbjct: 67 LTGVDYHAIPGSGTLICNVNCKVRFDE 93
>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol
dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}
Length = 187
Score = 28.1 bits (61), Expect = 1.2
Identities = 11/106 (10%), Positives = 29/106 (27%), Gaps = 4/106 (3%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRM 106
+QT+ ++GA G GSL + + ++ DA +
Sbjct: 30 SNQTMVVSGAAGACGSLAG----QIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYK 85
Query: 107 RLECPNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVC 152
+ G ++ + + + + + +
Sbjct: 86 TGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQ 131
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin
dehydrogenase {Methylobacterium extorquens [TaxId:
408]}
Length = 191
Score = 27.9 bits (61), Expect = 1.4
Identities = 5/28 (17%), Positives = 9/28 (32%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLRCCPQ 74
K + + TG +G L +
Sbjct: 22 KGKKAVVLAGTGPVGMRSAALLAGEGAE 49
>d2g17a1 c.2.1.3 (A:1-153,A:309-334)
N-acetyl-gamma-glutamyl-phosphate reductase ArgC
{Salmonella typhimurium [TaxId: 90371]}
Length = 179
Score = 27.3 bits (59), Expect = 2.4
Identities = 21/167 (12%), Positives = 40/167 (23%), Gaps = 15/167 (8%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
I GA+G+ G+ LV + P + L ++ + +D +
Sbjct: 4 TLIVGASGYAGAELV-SYVNRHPHMTITAL-----TVSAQSNDAGKLISDLHPQLKGIVD 57
Query: 111 PNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEE-- 168
D+ + A + + + V L E
Sbjct: 58 LPLQPMSDVRDFSADVDVVFLATAHEVSHDLAPQFLQAGCVVFDLSGAFRVNDRAFYEKY 117
Query: 169 ----LLISQTTIIFHIAATVRFDEHIRTAYNINVKG---TQTILALA 208
+ + + TA I V G A+
Sbjct: 118 YGFTHQYPELLEQAVYGLAEWNVDKLNTANLIAVPGLLKGAAAQAVQ 164
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 27.3 bits (60), Expect = 2.6
Identities = 11/65 (16%), Positives = 21/65 (32%), Gaps = 7/65 (10%)
Query: 265 IIGGKPNSYTLTKATAEDLVRQVGHELPICVLRPSIVFPTLQEPMPLWIKGFNGVMALAL 324
+ + + + D V + P +++P + F G L
Sbjct: 51 VKSSNGALFLVLRPLLVDYVMSMPR-------GPQVIYPKDAAQIVHEGDIFPGARVLEA 103
Query: 325 GAGTG 329
GAG+G
Sbjct: 104 GAGSG 108
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 97
Score = 26.0 bits (56), Expect = 2.9
Identities = 11/43 (25%), Positives = 14/43 (32%)
Query: 235 KFYPPVFTAEELSALVAHASDEEIALLNEHIIGGKPNSYTLTK 277
+ Y PVF + L S EE L P +Y
Sbjct: 1 RSYGPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKM 43
>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 144
Score = 26.3 bits (57), Expect = 4.2
Identities = 14/79 (17%), Positives = 25/79 (31%), Gaps = 3/79 (3%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
+ + GATG +G LV L + ++ LL + S QR+ + +
Sbjct: 5 VAVVGATGSVGEALVGLLDERDFPLHRLHLL---ASAESAGQRMGFAESSLRVGDVDSFD 61
Query: 111 PNYADKVDIGITHRVYNYF 129
+ V
Sbjct: 62 FSSVGLAFFAAAAEVSRAH 80
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus
bisporus) [TaxId: 5341]}
Length = 260
Score = 26.6 bits (58), Expect = 4.5
Identities = 5/25 (20%), Positives = 11/25 (44%)
Query: 46 YKDQTIFITGATGFLGSLLVEKLLR 70
+ ++TI +TG +G +
Sbjct: 7 FVNKTIIVTGGNRGIGLAFTRAVAA 31
>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Thermotoga maritima [TaxId: 2336]}
Length = 234
Score = 26.6 bits (58), Expect = 4.9
Identities = 4/24 (16%), Positives = 13/24 (54%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+D+ + + A+ +G + + L +
Sbjct: 3 RDKGVLVLAASRGIGRAVADVLSQ 26
>d1vkna1 c.2.1.3 (A:1-144,A:308-339)
N-acetyl-gamma-glutamyl-phosphate reductase ArgC
{Thermotoga maritima [TaxId: 2336]}
Length = 176
Score = 26.0 bits (56), Expect = 5.5
Identities = 26/161 (16%), Positives = 49/161 (30%), Gaps = 12/161 (7%)
Query: 51 IFITGATGFLGSLLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNYFNDAVFDRMRLEC 110
I GATG+ G LV +LL+ P+ + L RT + + + +++ E
Sbjct: 4 AGIIGATGYTGLELV-RLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEK 62
Query: 111 PNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVCGQLEADTFGLSARDEELL 170
+ V +Y +++ +D+ D + L
Sbjct: 63 VSKNCDVLFTALPAGASYDLVRELKGVKI--------IDLGADFRFDDPGVYREWYGKEL 114
Query: 171 ISQTTIIFHIAATVRFDEHIRTAYNINVKG---TQTILALA 208
I E I+ A + G + A+
Sbjct: 115 SGYENIKRVYGLPELHREEIKNAQVVGNPGLVKGASGQAVQ 155
>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 26.4 bits (57), Expect = 5.8
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
K ITG LG E+L+
Sbjct: 4 KGLVAVITGGASGLGLATAERLVG 27
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly
(Drosophila lebanonensis) [TaxId: 7225]}
Length = 254
Score = 26.2 bits (57), Expect = 6.1
Identities = 4/24 (16%), Positives = 11/24 (45%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
++ + A G +G +L++
Sbjct: 4 TNKNVIFVAALGGIGLDTSRELVK 27
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein
reductase {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 237
Score = 26.2 bits (57), Expect = 6.1
Identities = 4/24 (16%), Positives = 12/24 (50%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+++ +TG +G + ++L
Sbjct: 6 VSRSVLVTGGNRGIGLAIAQRLAA 29
>d1bdba_ c.2.1.2 (A:)
Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
{Pseudomonas sp., lb400 [TaxId: 306]}
Length = 276
Score = 26.1 bits (57), Expect = 6.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
K + + ITG LG LV++ +
Sbjct: 4 KGEAVLITGGASGLGRALVDRFVA 27
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium
aquaticum [TaxId: 144185]}
Length = 258
Score = 26.2 bits (57), Expect = 6.2
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
D+ + ITG LG +L
Sbjct: 3 TDRVVLITGGGSGLGRATAVRLAA 26
>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Escherichia coli [TaxId: 562]}
Length = 243
Score = 26.3 bits (57), Expect = 6.7
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+ + +TGA+ +G + E L
Sbjct: 3 EGKIALVTGASRGIGRAIAETLAA 26
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer
{Caenorhabditis elegans [TaxId: 6239]}
Length = 250
Score = 26.0 bits (56), Expect = 6.9
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
++ +TGA +G LV++L++
Sbjct: 2 SPGSVVVTGANRGIGLGLVQQLVK 25
>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 259
Score = 26.1 bits (57), Expect = 6.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
K +T+ +TG T +G +VE+
Sbjct: 7 KAKTVLVTGGTKGIGHAIVEEFAG 30
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 25.9 bits (56), Expect = 7.5
Identities = 5/24 (20%), Positives = 13/24 (54%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+ + + +TGA+ +G + L +
Sbjct: 13 QGKKVIVTGASKGIGREMAYHLAK 36
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase
{Thermus thermophilus [TaxId: 274]}
Length = 242
Score = 25.7 bits (56), Expect = 7.6
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
KD+ + ITGA +G +E +
Sbjct: 4 KDKAVLITGAAHGIGRATLELFAK 27
>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 256
Score = 25.9 bits (56), Expect = 7.9
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+T ITG+ +G E +R
Sbjct: 4 DGKTALITGSARGIGRAFAEAYVR 27
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga
maritima [TaxId: 2336]}
Length = 251
Score = 25.8 bits (56), Expect = 8.2
Identities = 5/24 (20%), Positives = 11/24 (45%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+ + +TG + LG + + L
Sbjct: 4 RGRVALVTGGSRGLGFGIAQGLAE 27
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium
[TaxId: 1404]}
Length = 261
Score = 25.9 bits (56), Expect = 8.5
Identities = 5/24 (20%), Positives = 12/24 (50%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+ + + ITG++ LG + +
Sbjct: 6 EGKVVVITGSSTGLGKSMAIRFAT 29
>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of
estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 302
Score = 25.7 bits (56), Expect = 8.7
Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 40 SPIQEFYKDQTIFITGATGFLGSLLVEKLLR 70
SP++ + + + +TGA G LG
Sbjct: 1 SPLR--FDGRVVLVTGAGGGLGRAYALAFAE 29
>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter
oxydans [TaxId: 442]}
Length = 260
Score = 25.9 bits (56), Expect = 8.8
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+ +TGA G +G +L
Sbjct: 4 NGKVCLVTGAGGNIGLATALRLAE 27
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 25.7 bits (56), Expect = 9.0
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+D+ +TGA+G +G+ + L++
Sbjct: 9 RDRLALVTGASGGIGAAVARALVQ 32
>d2f2ab1 a.182.1.2 (B:294-400) Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B, GatB, C-terminal domain
{Staphylococcus aureus [TaxId: 1280]}
Length = 107
Score = 24.6 bits (53), Expect = 9.0
Identities = 7/38 (18%), Positives = 14/38 (36%)
Query: 158 DTFGLSARDEELLISQTTIIFHIAATVRFDEHIRTAYN 195
+ GL A D +L + +T+ ++ N
Sbjct: 12 NELGLPAYDAHVLTLTKEMSDFFESTIEHGADVKLTSN 49
>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 259
Score = 25.5 bits (55), Expect = 9.1
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLRCCPQIRKIILLIRT 84
+TGA+ G L +L R +++ R+
Sbjct: 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARS 42
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 25.6 bits (55), Expect = 9.2
Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 6/107 (5%)
Query: 51 IFITGATGFLGS---LLVEKLLRCCPQIRKIILLIRTRGSTSITQRVYNY--FNDAVFDR 105
I +T TGFLG+ L+ +L KI ++ G S+ ++
Sbjct: 3 IAVTLLTGFLGAGKTTLLRHILN-EQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTN 61
Query: 106 MRLECPNYADKVDIGITHRVYNYFNDAVFDRMRLECPNYADKVDIVC 152
+ C + D + + FDR+ +EC AD I+
Sbjct: 62 GCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQ 108
>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol
dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId:
35933]}
Length = 268
Score = 25.8 bits (56), Expect = 9.2
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 47 KDQTIFITGATGFLGSLLVEKLLR 70
+D+ ITG G +G + +R
Sbjct: 5 QDKVAIITGGAGGIGETTAKLFVR 28
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 25.7 bits (55), Expect = 9.8
Identities = 4/22 (18%), Positives = 9/22 (40%)
Query: 249 LVAHASDEEIALLNEHIIGGKP 270
++ + E A + + KP
Sbjct: 215 MLTPVAINEGAAFVDTVFANKP 236
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.139 0.415
Gapped
Lambda K H
0.267 0.0458 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,412,015
Number of extensions: 66252
Number of successful extensions: 270
Number of sequences better than 10.0: 1
Number of HSP's gapped: 268
Number of HSP's successfully gapped: 88
Length of query: 366
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 279
Effective length of database: 1,213,086
Effective search space: 338450994
Effective search space used: 338450994
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (24.9 bits)