BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17531
(255 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9IA79|BI1_PAROL Probable Bax inhibitor 1 OS=Paralichthys olivaceus GN=tmbim6 PE=2
SV=1
Length = 237
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 101/156 (64%), Gaps = 3/156 (1%)
Query: 71 STKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMSTKNQI 130
ST+ HL+NVY L + M A AG+Y+ + +FQ + LS +G+ G + ++ T +
Sbjct: 22 STQVHLKNVYSSLAVCMFVAAAGSYVHVVTRLFQGGM---LSVLGSLGMMFWLAMTPHNS 78
Query: 131 NSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIFAREG 190
+ + R GF TG+GL P L+ I +NPSI+VTAF+ T+++FV FTL+A++A+
Sbjct: 79 ETEKKRLAILAGFAFLTGVGLCPTLDFVIAINPSIIVTAFLGTSVIFVCFTLSALYAKRR 138
Query: 191 QWIYIGGSLMTMLSTLITLSLANLFFGSKLLFDRYL 226
++++GG+LM+ LS L +S+ N+FFGS +LF ++
Sbjct: 139 SYLFLGGTLMSGLSILFLMSMMNMFFGSVMLFKAHM 174
>sp|Q66RM2|BI1_PIG Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1
Length = 237
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 100/162 (61%), Gaps = 3/162 (1%)
Query: 67 HSDSSTKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMST 126
H ST+QHL+ VY L M A AGAY+ + Q+ L+ L S+G +I++M+T
Sbjct: 18 HITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGSLGL---MIWLMAT 74
Query: 127 KNQINSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIF 186
+ + + R G GF TG+GLGP L++ I +NPSI+ TAFM T ++F FTL+A++
Sbjct: 75 PHSHETEQKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTLSALY 134
Query: 187 AREGQWIYIGGSLMTMLSTLITLSLANLFFGSKLLFDRYLLV 228
AR ++++GG LM+ +S ++ SL NLFFGS LF L V
Sbjct: 135 ARRRSYLFLGGILMSAMSLMVLSSLGNLFFGSIWLFQANLYV 176
>sp|Q0V882|BI1_BOVIN Bax inhibitor 1 OS=Bos taurus GN=TMBIM6 PE=2 SV=1
Length = 236
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 98/157 (62%), Gaps = 3/157 (1%)
Query: 67 HSDSSTKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMST 126
H ST+QHL+ VY L M A AGAY+ + Q+ L+ L S+G +I++M+T
Sbjct: 18 HITPSTQQHLKKVYASFALCMFVAAAGAYIHVVTHFIQAGLLSALGSLGL---MIWLMAT 74
Query: 127 KNQINSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIF 186
+ + + R G GF TG+GLGP L++ I +NPSI+ TAFM T ++F FTL+A++
Sbjct: 75 PHSHETEQKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTLSALY 134
Query: 187 AREGQWIYIGGSLMTMLSTLITLSLANLFFGSKLLFD 223
AR ++++GG LM+ +S ++ SL NLFFGS LF
Sbjct: 135 ARRRSYLFLGGILMSAMSLMLLSSLGNLFFGSVWLFQ 171
>sp|Q9D2C7|BI1_MOUSE Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2 SV=1
Length = 237
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
Query: 67 HSDSSTKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMST 126
H ST+QHL+ VY L M A AGAY+ + Q+ L+ L S+ +I++M+T
Sbjct: 18 HITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLAL---MIWLMAT 74
Query: 127 KNQINSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIF 186
+ + + R G GF TG+GLGP LE+ I VNPSI+ TAFM T ++F F+L+A++
Sbjct: 75 PHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAVNPSILPTAFMGTAMIFTCFSLSALY 134
Query: 187 AREGQWIYIGGSLMTMLSTLITLSLANLFFGSKLLFD 223
AR ++++GG LM+ +S ++ SL NLFFGS LF
Sbjct: 135 ARRRSYLFLGGILMSAMSLMLLSSLGNLFFGSIWLFQ 171
>sp|P55061|BI1_HUMAN Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=2
Length = 237
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 3/162 (1%)
Query: 67 HSDSSTKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMST 126
H ST+QHL+ VY L M A AGAY+ + Q+ L LS++G+ +I++M+T
Sbjct: 18 HITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGL---LSALGSLILMIWLMAT 74
Query: 127 KNQINSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIF 186
+ + + R G GF TG+GLGP LE I VNPSI+ TAFM T ++F FTL+A++
Sbjct: 75 PHSHETEQKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILPTAFMGTAMIFTCFTLSALY 134
Query: 187 AREGQWIYIGGSLMTMLSTLITLSLANLFFGSKLLFDRYLLV 228
AR ++++GG LM+ LS L+ SL N+FFGS LF L V
Sbjct: 135 ARRRSYLFLGGILMSALSLLLLSSLGNVFFGSIWLFQANLYV 176
>sp|Q5R7R1|BI1_PONAB Bax inhibitor 1 OS=Pongo abelii GN=TMBIM6 PE=2 SV=2
Length = 237
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 3/162 (1%)
Query: 67 HSDSSTKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMST 126
H ST+QHL+ VY L M A AGAY+ + Q+ L LS++G+ +I++M+T
Sbjct: 18 HITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGL---LSALGSLILMIWLMAT 74
Query: 127 KNQINSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIF 186
+ + + R G GF TG+GLGP LE I VNPSI+ TAFM T ++F FTL+A++
Sbjct: 75 PHSHETEQKRLGLLAGFAFLTGVGLGPALEFCITVNPSILPTAFMGTAMIFTCFTLSALY 134
Query: 187 AREGQWIYIGGSLMTMLSTLITLSLANLFFGSKLLFDRYLLV 228
AR ++++GG LM+ LS L+ SL N+FFGS LF L V
Sbjct: 135 ARRRSYLFLGGILMSALSLLLLSSLGNVFFGSIWLFQANLYV 176
>sp|P55062|BI1_RAT Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6 PE=2 SV=2
Length = 237
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 95/157 (60%), Gaps = 3/157 (1%)
Query: 67 HSDSSTKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMST 126
H ST+QHL+ VY L M A AGAY+ + Q+ L+ L ++ +I +M+T
Sbjct: 18 HITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGALAL---MICLMAT 74
Query: 127 KNQINSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIF 186
+ + + R G GF TG+GLGP LE+ I +NPSI+ TAFM T ++F F+L+A++
Sbjct: 75 PHSHETEQKRLGLLAGFAFLTGVGLGPALELCIAINPSILPTAFMGTAMIFTCFSLSALY 134
Query: 187 AREGQWIYIGGSLMTMLSTLITLSLANLFFGSKLLFD 223
AR ++++GG LM+ +S + SL NLFFGS LF
Sbjct: 135 ARRRSYLFLGGILMSAMSLMFVSSLGNLFFGSIWLFQ 171
>sp|Q9VSH3|BI1_DROME Probable Bax inhibitor 1 OS=Drosophila melanogaster GN=CG7188 PE=2
SV=1
Length = 245
Score = 71.2 bits (173), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 4/147 (2%)
Query: 72 TKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMSTKNQIN 131
++HL VY L A GA LQ+ + L + + V G Y KN
Sbjct: 27 VREHLSKVYMVLGSTAAATAMGAMLQMRDFLDLGVLAAVATLVLVLGLHFYKDDGKNYYT 86
Query: 132 SNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIFAREGQ 191
R G F C+G LGPLL +NP+I+++A T + F+S +L+A+ A +G+
Sbjct: 87 ----RLGMLYAFGFCSGQTLGPLLGYICSINPAIILSALTGTFVTFISLSLSALLAEQGK 142
Query: 192 WIYIGGSLMTMLSTLITLSLANLFFGS 218
++Y+GG L+++++T+ LSL N+ F S
Sbjct: 143 YLYLGGMLVSVINTMALLSLFNMVFKS 169
>sp|Q54K40|BI1_DICDI Bax inhibitor 1 homolog OS=Dictyostelium discoideum GN=DDB_G0287617
PE=3 SV=1
Length = 254
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 71 STKQHLQNVYGCLTLGMLAATAGAYLQ--LTQAMFQSTLVMLLSSVGAFGFLIYVMSTKN 128
STKQ L VY L +G+L AT G + + F TL++++ S F K
Sbjct: 35 STKQTLTKVYCALAIGILTATVGVLFSMFIYRPGFLMTLLLVIGSAILFATTPRTQDYKT 94
Query: 129 QINSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIFAR 188
Q+ R F T TG+ L+E+ + +N SIV+ AFM T +F+SFTL ++
Sbjct: 95 QVK----RFTLFNLVTFVTGMSSSGLIELYMDINSSIVLNAFMATCGIFISFTLFSLLTN 150
Query: 189 EGQWIYIGGSLMTMLSTLITLSLANLFFG 217
+ +I+IG SL ++ + L+L LF G
Sbjct: 151 KRLYIFIGSSLASLSIGIFVLALTRLFGG 179
>sp|Q9LD45|BI1_ARATH Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1
Length = 247
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 71 STKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMSTKNQI 130
+ + HL+ VY L ++A+ GAYL + + +L+++G G +I+++S
Sbjct: 31 AVQNHLKRVYLTLCCALVASAFGAYLHVLW-----NIGGILTTIGCIGTMIWLLSCPPY- 84
Query: 131 NSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIFAREG 190
++ R + G +GPL+++AI V+PSI++TAF+ T + FV F+ AA+ AR
Sbjct: 85 -EHQKRLSLLFVSAVLEGASVGPLIKVAIDVDPSILITAFVGTAIAFVCFSAAAMLARRR 143
Query: 191 Q 191
+
Sbjct: 144 E 144
>sp|Q9MBD8|BI1_ORYSJ Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN=BI1 PE=2 SV=1
Length = 249
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 71 STKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMSTKNQI 130
+ + HL+ VY L + + A+ GAYL + A+ ++ +L VG+ +L V +
Sbjct: 32 AVQSHLKLVYLTLCVALAASAVGAYLHV--ALNIGGMLTMLGCVGSIAWLFSV-----PV 84
Query: 131 NSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPSIVVTAFMLTTLLFVSFTLAAIFAREG 190
R R G + L G +GPL+++A+ + SI+VTAF+ T + F FT AAI A+
Sbjct: 85 FEERKRFGILLAAALLEGASVGPLIKLAVDFDSSILVTAFVGTAIAFGCFTCAAIVAKRR 144
Query: 191 QW 192
++
Sbjct: 145 EY 146
>sp|Q9PIQ8|Y236_CAMJE Uncharacterized protein Cj0236c OS=Campylobacter jejuni subsp.
jejuni serotype O:2 (strain NCTC 11168) GN=Cj0236c PE=3
SV=1
Length = 231
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 69 DSSTKQHLQNVYGCLTLGMLAATAGAYL---QLTQAMFQSTLVMLLSSVGAFGFLIYVMS 125
S ++ Y +LAAT GAY+ L QS + + G L +
Sbjct: 19 SSELSIFIKQTYQLFAASLLAATVGAYVGIFALASFFIQSQVTFWILFAVEIGLLFALQW 78
Query: 126 TKNQINSNRNRTGAFIGFTLCTGIGLGPLLEMAIVVNPS---IVVTAFMLTTLLFVSFTL 182
K + N GFT C+G+ L PLL ++++ P+ I+ AF LTT+ F ++
Sbjct: 79 KKREAPLN---LVLLFGFTFCSGLTLTPLL-ISVLALPAGGIIIAQAFALTTVAFAGLSV 134
Query: 183 AAIFAREGQWIYIGGSLMTMLSTLITLSLANLFFGSKLL 221
A+ ++ + +G +L +L ++ SL NLFF S ++
Sbjct: 135 FAMNTKK-DFTVMGKALFIVLIVIVAASLLNLFFQSSIV 172
>sp|C0ZPK5|FTSH_RHOE4 ATP-dependent zinc metalloprotease FtsH OS=Rhodococcus erythropolis
(strain PR4 / NBRC 100887) GN=ftsH PE=3 SV=1
Length = 854
Score = 32.3 bits (72), Expect = 3.2, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 19 GPSPIPVEQRLGIYWEEKVSWKTNDYGNYGAPPPSQGGYEE 59
G +P P Q G Y + + D G YG P P Q Y E
Sbjct: 742 GQNPTPPNQSQGQYGQPQHGQPQPDQGQYGQPHPGQQAYPE 782
>sp|Q9KSA1|Y1358_VIBCH Uncharacterized membrane protein VC_1358 OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=VC_1358 PE=3 SV=1
Length = 223
Score = 32.3 bits (72), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 66 LHSDSSTKQHLQNVYGCLTLGMLAATAGAYLQLTQAMFQSTLVMLLSSVGAFGFLIYVMS 125
L T + L+N Y L++ ++ + A + + S +V L+ + A G L +VM
Sbjct: 12 LERTLETNKVLKNTYFLLSMTLVTSAIAAMATMAIGI--SPIVALVMQLAAIGILFFVM- 68
Query: 126 TKNQINSNRNRTGAFIGFTLCTGIGLGPLLEM--AIVVNPSIVVTAFMLTTLLFVSFTLA 183
INS+ F+ FT G LGP+L A+ P ++ A LT ++F+ +
Sbjct: 69 -PKAINSSSGLVWTFV-FTGLMGGALGPMLNFYAAMPNGPIVIAQALGLTGMVFLGLSAY 126
Query: 184 AIFAREGQWIYIGGSLMTMLSTLITLSLANLFFGSKL 220
I +++ + ++ L L +I +L N+F GS +
Sbjct: 127 TITSKK-DFSFMRNFLFAGLIIVIVAALINIFVGSTV 162
>sp|Q49P94|GAAP_VACCL Golgi anti-apoptotic protein OS=Vaccinia virus (strain Lister)
GN=L6 PE=1 SV=1
Length = 237
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 28/147 (19%)
Query: 42 NDYGNYGAPPPSQGGYEEMCENCWLHSDSSTKQHLQNVYGCLTLGMLAATAGA----YLQ 97
D NYG+ S + M L+ VYG L L L TA Y
Sbjct: 13 EDDFNYGSSVASASVHIRM-------------AFLRKVYGILCLQFLLTTATTAVFLYFD 59
Query: 98 LTQAMFQSTLVMLLSSV-GAFGFLIYVMSTKNQINSNRNRTGAFI--GFTLCTGIGLGPL 154
+ Q + V++L+S+ G+ G LI+ ++ ++ +++ ++ GFTL + L +
Sbjct: 60 CMRTFIQGSPVLILASMFGSIG-LIFALT----LHRHKHPLNLYLLCGFTLSESLTLASV 114
Query: 155 LEMAIVVNPSIVVTAFMLTTLLFVSFT 181
+ + +V+ AFMLTT F++ T
Sbjct: 115 VTF---YDVHVVMQAFMLTTAAFLALT 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,821,394
Number of Sequences: 539616
Number of extensions: 3355466
Number of successful extensions: 8177
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 8142
Number of HSP's gapped (non-prelim): 43
length of query: 255
length of database: 191,569,459
effective HSP length: 115
effective length of query: 140
effective length of database: 129,513,619
effective search space: 18131906660
effective search space used: 18131906660
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)