RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17531
         (255 letters)



>d1wpla_ d.96.1.1 (A:) GTP cyclohydrolase I {Rat (Rattus
          norvegicus) [TaxId: 10116]}
          Length = 194

 Score = 25.3 bits (55), Expect = 7.3
 Identities = 7/55 (12%), Positives = 13/55 (23%)

Query: 27 QRLGIYWEEKVSWKTNDYGNYGAPPPSQGGYEEMCENCWLHSDSSTKQHLQNVYG 81
           R     +           +          ++EM     +   S  + HL    G
Sbjct: 40 WRAATAMQFFTKGYQETISDVLNDAIFDEDHDEMVIVKDIDMFSMCEHHLVPFVG 94


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.136    0.410 

Gapped
Lambda     K      H
   0.267   0.0566    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 881,548
Number of extensions: 37826
Number of successful extensions: 78
Number of sequences better than 10.0: 1
Number of HSP's gapped: 78
Number of HSP's successfully gapped: 5
Length of query: 255
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 172
Effective length of database: 1,268,006
Effective search space: 218097032
Effective search space used: 218097032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.2 bits)