BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17532
(461 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 200/288 (69%), Positives = 237/288 (82%), Gaps = 1/288 (0%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIG 173
+QL+EVKA+GRFG VWKA+ NE VAVKIF +QDKQSWQ+E E++ LP M+H+NIL++IG
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 174 AEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
AEKRG S+ + WLITA+HE+GSL DFLK N+V+W +LC IA +M++GL +LHE+I P
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDI-PGL 144
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
D +KPA++HRD KS NVLLK++LTA IADFGLAL FE GK GDTHGQVGTRRYMAPEV
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQE 353
LEGAINF RDAFLRIDMYA LVLWELASRC++ P EY LPF E+G HPSLEDMQE
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQE 264
Query: 354 AVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVER 401
VVHKK RP L + W++HAGM LC+T+EECWDHDAEARLSA CV ER
Sbjct: 265 VVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGER 312
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 421 bits (1081), Expect = e-118, Method: Compositional matrix adjust.
Identities = 193/289 (66%), Positives = 237/289 (82%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYI 172
S+QL+E+KA+GRFG VWKA+ N+ VAVKIF +QDKQSWQSE+EIF P M+H+N+L++I
Sbjct: 16 SLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFI 75
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
AEKRG ++ E WLITA+H++GSL D+LK NI+TW +LC +A +MS+GL +LHE++
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
+ + +KP++AHRDFKS NVLLKSDLTA +ADFGLA+ FEPGKP GDTHGQVGTRRYMAPE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQ 352
VLEGAINF RDAFLRIDMYA LVLWEL SRC + P EY LPF E+G HPSLE++Q
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQ 255
Query: 353 EAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVER 401
E VVHKK+RPT+ + W +H G+ LC T+EECWDHDAEARLSA CV ER
Sbjct: 256 EVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAGCVEER 304
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 254 bits (649), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 133/308 (43%), Positives = 194/308 (62%), Gaps = 16/308 (5%)
Query: 107 PQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHD 166
P +++L+E+ +GR+GAV+K VAVK+F ++Q++ +E+ I+++P MEHD
Sbjct: 8 PSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHD 67
Query: 167 NILRYI-GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
NI R+I G E+ E+ L+ Y+ GSL +L + W CR+A S+++GL +L
Sbjct: 68 NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYL 127
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL------LFEPGKPCGDT 279
H E LP + D YKPA++HRD S NVL+K+D T I+DFGL++ L PG+
Sbjct: 128 HTE-LP-RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA 185
Query: 280 HGQVGTRRYMAPEVLEGAINFSRD---AFLRIDMYACALVLWELASRCSSVSPPPG--EY 334
+VGT RYMAPEVLEGA+N RD A ++DMYA L+ WE+ RC+ + P EY
Sbjct: 186 ISEVGTIRYMAPEVLEGAVNL-RDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244
Query: 335 RLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHA-GMLALCDTMEECWDHDAEARL 393
++ F EVG+HP+ EDMQ V +K RP PE WK+++ + +L +T+E+CWD DAEARL
Sbjct: 245 QMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARL 304
Query: 394 SASCVVER 401
+A ER
Sbjct: 305 TAQXAEER 312
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 238 bits (606), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 178/288 (61%), Gaps = 7/288 (2%)
Query: 111 CRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR 170
R+I L E +GRFG VW+ K++ E VAVKIF ++++SW E EI++ + H+NIL
Sbjct: 41 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 100
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
+I A+ + T+ WL++ YHE GSL D+L VT E + ++ALS + GL HLH EI+
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 160
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT--HGQVGTRRY 288
+ KPA+AHRD KS N+L+K + T IAD GLA+ + D + +VGT+RY
Sbjct: 161 GTQG---KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 289 MAPEVLEGAINFSR-DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
MAPEVL+ +IN ++F R D+YA LV WE+A RC S+ +Y+LP+ V PS
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC-SIGGIHEDYQLPYYDLVPSDPS 276
Query: 348 LEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+E+M++ V +KLRP +P W+ + + M ECW + ARL+A
Sbjct: 277 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 324
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 238 bits (606), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 178/288 (61%), Gaps = 7/288 (2%)
Query: 111 CRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR 170
R+I L E +GRFG VW+ K++ E VAVKIF ++++SW E EI++ + H+NIL
Sbjct: 28 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 87
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
+I A+ + T+ WL++ YHE GSL D+L VT E + ++ALS + GL HLH EI+
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 147
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT--HGQVGTRRY 288
+ KPA+AHRD KS N+L+K + T IAD GLA+ + D + +VGT+RY
Sbjct: 148 GTQG---KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 289 MAPEVLEGAINFSR-DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
MAPEVL+ +IN ++F R D+YA LV WE+A RC S+ +Y+LP+ V PS
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC-SIGGIHEDYQLPYYDLVPSDPS 263
Query: 348 LEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+E+M++ V +KLRP +P W+ + + M ECW + ARL+A
Sbjct: 264 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 311
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 178/288 (61%), Gaps = 7/288 (2%)
Query: 111 CRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR 170
R+I L E +GRFG VW+ K++ E VAVKIF ++++SW E EI++ + H+NIL
Sbjct: 3 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 62
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
+I A+ + T+ WL++ YHE GSL D+L VT E + ++ALS + GL HLH EI+
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT--HGQVGTRRY 288
+ KPA+AHRD KS N+L+K + T IAD GLA+ + D + +VGT+RY
Sbjct: 123 GTQG---KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 289 MAPEVLEGAINFSR-DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
MAPEVL+ +IN ++F R D+YA LV WE+A RC S+ +Y+LP+ V PS
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC-SIGGIHEDYQLPYYDLVPSDPS 238
Query: 348 LEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+E+M++ V +KLRP +P W+ + + M ECW + ARL+A
Sbjct: 239 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 286
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 237 bits (605), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 178/288 (61%), Gaps = 7/288 (2%)
Query: 111 CRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR 170
R+I L E +GRFG VW+ K++ E VAVKIF ++++SW E EI++ + H+NIL
Sbjct: 8 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 67
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
+I A+ + T+ WL++ YHE GSL D+L VT E + ++ALS + GL HLH EI+
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 127
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT--HGQVGTRRY 288
+ KPA+AHRD KS N+L+K + T IAD GLA+ + D + +VGT+RY
Sbjct: 128 GTQG---KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 289 MAPEVLEGAINFSR-DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
MAPEVL+ +IN ++F R D+YA LV WE+A RC S+ +Y+LP+ V PS
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC-SIGGIHEDYQLPYYDLVPSDPS 243
Query: 348 LEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+E+M++ V +KLRP +P W+ + + M ECW + ARL+A
Sbjct: 244 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 291
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 237 bits (605), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 178/288 (61%), Gaps = 7/288 (2%)
Query: 111 CRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR 170
R+I L E +GRFG VW+ K++ E VAVKIF ++++SW E EI++ + H+NIL
Sbjct: 2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 61
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
+I A+ + T+ WL++ YHE GSL D+L VT E + ++ALS + GL HLH EI+
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT--HGQVGTRRY 288
+ KPA+AHRD KS N+L+K + T IAD GLA+ + D + +VGT+RY
Sbjct: 122 GTQG---KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 289 MAPEVLEGAINFSR-DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
MAPEVL+ +IN ++F R D+YA LV WE+A RC S+ +Y+LP+ V PS
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC-SIGGIHEDYQLPYYDLVPSDPS 237
Query: 348 LEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+E+M++ V +KLRP +P W+ + + M ECW + ARL+A
Sbjct: 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 285
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 178/288 (61%), Gaps = 7/288 (2%)
Query: 111 CRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR 170
R+I L E +GRFG VW+ K++ E VAVKIF ++++SW E EI++ + H+NIL
Sbjct: 5 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 64
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
+I A+ + T+ WL++ YHE GSL D+L VT E + ++ALS + GL HLH EI+
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 124
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT--HGQVGTRRY 288
+ KPA+AHRD KS N+L+K + T IAD GLA+ + D + +VGT+RY
Sbjct: 125 GTQG---KPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 289 MAPEVLEGAINFSR-DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
MAPEVL+ +IN ++F R D+YA LV WE+A RC S+ +Y+LP+ V PS
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC-SIGGIHEDYQLPYYDLVPSDPS 240
Query: 348 LEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+E+M++ V +KLRP +P W+ + + M ECW + ARL+A
Sbjct: 241 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTA 288
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 228 bits (580), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 172/288 (59%), Gaps = 7/288 (2%)
Query: 111 CRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR 170
+ IQ+V+ +GR+G VW K++ E VAVK+F ++ SW E EI++ M H+NIL
Sbjct: 36 AKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILG 95
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
+I A+ +G T+ +LIT YHE GSL D+LK + + + ++A S GL HLH EI
Sbjct: 96 FIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT--HGQVGTRRY 288
+ KPA+AHRD KS N+L+K + T IAD GLA+ F D + +VGT+RY
Sbjct: 156 STQG---KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 289 MAPEVLEGAINFSR-DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
M PEVL+ ++N + +++ DMY+ L+LWE+A RC S EY+LP+ V PS
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVS-GGIVEEYQLPYHDLVPSDPS 271
Query: 348 LEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
EDM+E V KKLRP+ P W + + M ECW H+ +RL+A
Sbjct: 272 YEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTA 319
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 219 bits (557), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 168/287 (58%), Gaps = 7/287 (2%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRY 171
R I L+E +GR+G VW+ ++ ENVAVKIF +D++SW E E++ + H+NIL +
Sbjct: 37 RQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 96
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILP 231
I ++ T+ WLIT YHE GSL D+L+ + RI LS++ GL HLH EI
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHG--QVGTRRYM 289
+ KPA+AHRD KS N+L+K + IAD GLA++ D +VGT+RYM
Sbjct: 157 TQG---KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 213
Query: 290 APEVLEGAINFS-RDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APEVL+ I D++ R+D++A LVLWE+A R S + +Y+ PF V + PS
Sbjct: 214 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVS-NGIVEDYKPPFYDVVPNDPSF 272
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
EDM++ V + RP +P W + +L M+ECW + ARL+A
Sbjct: 273 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 319
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/287 (40%), Positives = 168/287 (58%), Gaps = 7/287 (2%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRY 171
R I L+E +GR+G VW+ ++ ENVAVKIF +D++SW E E++ + H+NIL +
Sbjct: 8 RDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 67
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILP 231
I ++ T+ WLIT YHE GSL D+L+ + RI LS++ GL HLH EI
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHG--QVGTRRYM 289
+ KPA+AHRD KS N+L+K + IAD GLA++ D +VGT+RYM
Sbjct: 128 TQG---KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 290 APEVLEGAINFS-RDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APEVL+ I D++ R+D++A LVLWE+A R S + +Y+ PF V + PS
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVS-NGIVEDYKPPFYDVVPNDPSF 243
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
EDM++ V + RP +P W + +L M+ECW + ARL+A
Sbjct: 244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 167/285 (58%), Gaps = 7/285 (2%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIG 173
I L+E +GR+G VW+ ++ ENVAVKIF +D++SW E E++ + H+NIL +I
Sbjct: 10 ITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIA 69
Query: 174 AEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
++ T+ WLIT YHE GSL D+L+ + RI LS++ GL HLH EI +
Sbjct: 70 SDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHG--QVGTRRYMAP 291
KPA+AHRD KS N+L+K + IAD GLA++ D +VGT+RYMAP
Sbjct: 130 G---KPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 292 EVLEGAINFS-RDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLED 350
EVL+ I D++ R+D++A LVLWE+A R S + +Y+ PF V + PS ED
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVS-NGIVEDYKPPFYDVVPNDPSFED 245
Query: 351 MQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
M++ V + RP +P W + +L M+ECW + ARL+A
Sbjct: 246 MRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTA 290
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/288 (42%), Positives = 168/288 (58%), Gaps = 7/288 (2%)
Query: 111 CRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR 170
R + LVE +GR+G VW+ + E+VAVKIF +D+QSW E EI+ + HDNIL
Sbjct: 7 ARQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILG 66
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
+I ++ + T+ WLIT YHE GSL DFL+ + R+A+S + GL HLH EI
Sbjct: 67 FIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHG--QVGTRRY 288
+ KPA+AHRDFKS NVL+KS+L IAD GLA++ G D +VGT+RY
Sbjct: 127 GTQG---KPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRY 183
Query: 289 MAPEVLEGAINFS-RDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
MAPEVL+ I +++ D++A LVLWE+A R + V+ +YR PF V + PS
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARR-TIVNGIVEDYRPPFYDVVPNDPS 242
Query: 348 LEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
EDM++ V + PT+P + L M ECW + ARL+A
Sbjct: 243 FEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTA 290
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVK-----IFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
+G FG V+K N VAVK + + ++ Q +QEI + +H+N++ +G
Sbjct: 40 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 99
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNI----VTWEQLCRIALSMSKGLMHLHEEILP 231
G+ + L+ Y GSL D L C ++W C+IA + G+ LHE
Sbjct: 100 SDGD----DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--- 152
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
HRD KS N+LL TA I+DFGLA E VGT YMAP
Sbjct: 153 --------HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAP 204
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLP 337
E L G I + D+Y+ +VL E+ + P E+R P
Sbjct: 205 EALRGEIT------PKSDIYSFGVVLLEIITGL----PAVDEHREP 240
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVK-----IFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
+G FG V+K N VAVK + + ++ Q +QEI + +H+N++ +G
Sbjct: 40 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 99
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNI----VTWEQLCRIALSMSKGLMHLHEEILP 231
G+ + L+ Y GSL D L C ++W C+IA + G+ LHE
Sbjct: 100 SDGD----DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--- 152
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
HRD KS N+LL TA I+DFGLA E VGT YMAP
Sbjct: 153 --------HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAP 204
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLP 337
E L G I + D+Y+ +VL E+ + P E+R P
Sbjct: 205 EALRGEIT------PKSDIYSFGVVLLEIITGL----PAVDEHREP 240
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVK-----IFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
+G FG V+K N VAVK + + ++ Q +QEI + +H+N++ +G
Sbjct: 34 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS 93
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNI----VTWEQLCRIALSMSKGLMHLHEEILP 231
G+ + L+ Y GSL D L C ++W C+IA + G+ LHE
Sbjct: 94 SDGD----DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN--- 146
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
HRD KS N+LL TA I+DFGLA E VGT YMAP
Sbjct: 147 --------HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAP 198
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLP 337
E L G I + D+Y+ +VL E+ + P E+R P
Sbjct: 199 EALRGEIT------PKSDIYSFGVVLLEIITGL----PAVDEHREP 234
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVK-----IFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
+G FG V+K N VAVK + + ++ Q +QEI +H+N++ +G
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFS 90
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNI----VTWEQLCRIALSMSKGLMHLHEEILP 231
G+ + L+ Y GSL D L C ++W C+IA + G+ LHE
Sbjct: 91 SDGD----DLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN--- 143
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
HRD KS N+LL TA I+DFGLA E VGT Y AP
Sbjct: 144 --------HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLP 337
E L G I + D+Y+ +VL E+ + P E+R P
Sbjct: 196 EALRGEIT------PKSDIYSFGVVLLEIITGL----PAVDEHREP 231
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 29/217 (13%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQ---EIFKLPHMEHDNILR 170
+ + E G FG V +A++ +VAVKI + QD + + + E+ + + H NI+
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQL-----CRIALSMSKGLMHL 225
++GA + ++ ++T Y RGSL L + EQL +A ++KG+ +L
Sbjct: 99 FMGAVTQPPNLS----IVTEYLSRGSLYRLLHKSGAR-EQLDERRRLSMAYDVAKGMNYL 153
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
H P + HRD KS N+L+ T + DFGL+ L + GT
Sbjct: 154 HNR---------NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGT 202
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+MAPEVL + + D+Y+ ++LWELA+
Sbjct: 203 PEWMAPEVLRDEPSNEKS-----DVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 29/217 (13%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQ---EIFKLPHMEHDNILR 170
+ + E G FG V +A++ +VAVKI + QD + + + E+ + + H NI+
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQL-----CRIALSMSKGLMHL 225
++GA + ++ ++T Y RGSL L + EQL +A ++KG+ +L
Sbjct: 99 FMGAVTQPPNLS----IVTEYLSRGSLYRLLHKSGAR-EQLDERRRLSMAYDVAKGMNYL 153
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
H P + HR+ KS N+L+ T + DFGL+ L + GT
Sbjct: 154 HNR---------NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGT 202
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+MAPEVL + + D+Y+ ++LWELA+
Sbjct: 203 PEWMAPEVLRDEPSNEKS-----DVYSFGVILWELAT 234
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 21/216 (9%)
Query: 114 IQLVEVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLP-HMEHDNILR 170
+LVE+ G +G V+K + + A+K+ + + + +QEI L + H NI
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 171 YIGA--EKRGESIHTEFWLITAYHERGSLCDFLK---CNIVTWEQLCRIALSMSKGLMHL 225
Y GA +K + + WL+ + GS+ D +K N + E + I + +GL HL
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
H+ V HRD K NVLL + + DFG++ + + G + +GT
Sbjct: 146 HQH-----------KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD--RTVGRRNTFIGT 192
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELA 321
+MAPEV+ N + D+++ + E+A
Sbjct: 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 52/287 (18%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFL--MQDKQSWQSEQEIFKLPHMEHDNIL 169
SI+LV+ G+FG VW + N VAVK Q++ E + K ++HD ++
Sbjct: 14 SIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMK--TLQHDKLV 71
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN---IVTWEQLCRIALSMSKGLMHLH 226
R R E I+ +IT Y +GSL DFLK + V +L + +++G+ ++
Sbjct: 72 RLYAVVTREEPIY----IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 127
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD ++ NVL+ L IADFGLA + E + G
Sbjct: 128 -----------RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA-REGAKFPI 175
Query: 287 RYMAPEVLEGAINFSRDAF-LRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDH 345
++ APE AINF F ++ D+++ ++L+E+ + P PG
Sbjct: 176 KWTAPE----AINFG--CFTIKSDVWSFGILLYEIVTYGK--IPYPGR------------ 215
Query: 346 PSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
+ D+ A+ P + + L D M+ CW AE R
Sbjct: 216 -TNADVMTALSQGYRMPRVENCPDE------LYDIMKMCWKEKAEER 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 131/297 (44%), Gaps = 56/297 (18%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+ I++ EV +G FG V KAK++ ++VA+K + ++ E+ +L + H NI++
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERK-AFIVELRQLSRVNHPNIVKL 67
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCN----IVTWEQLCRIALSMSKGLMHLHE 227
GA L+ Y E GSL + L T L S+G+ +LH
Sbjct: 68 YGA------CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH- 120
Query: 228 EILPNKADSYKP-AVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTH--GQV 283
S +P A+ HRD K N+LL + T I DFG A + TH
Sbjct: 121 --------SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-------THMTNNK 165
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVG 343
G+ +MAPEV EG+ N+S + D+++ ++LWE+ +R R PF E+G
Sbjct: 166 GSAAWMAPEVFEGS-NYSE----KCDVFSWGIILWEVITR-----------RKPFD-EIG 208
Query: 344 DHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
P+ M VH RP L + + L M CW D R S +V+
Sbjct: 209 G-PAFRIMW--AVHNGTRPPLIKNLPKPIESL-----MTRCWSKDPSQRPSMEEIVK 257
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 131/297 (44%), Gaps = 56/297 (18%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+ I++ EV +G FG V KAK++ ++VA+K + ++ E+ +L + H NI++
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERK-AFIVELRQLSRVNHPNIVKL 66
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCN----IVTWEQLCRIALSMSKGLMHLHE 227
GA L+ Y E GSL + L T L S+G+ +LH
Sbjct: 67 YGA------CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH- 119
Query: 228 EILPNKADSYKP-AVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTH--GQV 283
S +P A+ HRD K N+LL + T I DFG A + TH
Sbjct: 120 --------SMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ-------THMTNNK 164
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVG 343
G+ +MAPEV EG+ N+S + D+++ ++LWE+ +R R PF E+G
Sbjct: 165 GSAAWMAPEVFEGS-NYSE----KCDVFSWGIILWEVITR-----------RKPFD-EIG 207
Query: 344 DHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
P+ M VH RP L + + L M CW D R S +V+
Sbjct: 208 G-PAFRIMW--AVHNGTRPPLIKNLPKPIESL-----MTRCWSKDPSQRPSMEEIVK 256
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQD---KQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
G FG V+K K+ + VAVKI + D +Q E+ L H NIL ++G +
Sbjct: 45 GSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNKAD 235
++T + E SL L ++ QL IA ++G+ +LH +
Sbjct: 104 -----DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK------- 151
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
+ HRD KSNN+ L LT I DFGLA + G+ +MAPEV+
Sbjct: 152 ----NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 296 GAIN--FSRDAFLRIDMYACALVLWELAS 322
N FS + D+Y+ +VL+EL +
Sbjct: 208 MQDNNPFS----FQSDVYSYGIVLYELMT 232
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 28/209 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 21 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 76
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L + +E +L IA ++G+ +LH +
Sbjct: 77 ----STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK----- 127
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
++ HRD KSNN+ L D T I DFGLA + G+ +MAPEV
Sbjct: 128 ------SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 181
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELAS 322
+ + S + D+YA +VL+EL +
Sbjct: 182 IR--MQDSNPYSFQSDVYAFGIVLYELMT 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 22 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 77
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L +E +L IA ++G+ +LH +
Sbjct: 78 ----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK----- 128
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
++ HRD KSNN+ L DLT I DFGLA + G+ +MAPEV
Sbjct: 129 ------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELAS 322
+ + + D+YA +VL+EL +
Sbjct: 183 IR--MQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 19 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 74
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L +E +L IA ++G+ +LH +
Sbjct: 75 ----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK----- 125
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
++ HRD KSNN+ L DLT I DFGLA + G+ +MAPEV
Sbjct: 126 ------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 179
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELAS 322
+ + + D+YA +VL+EL +
Sbjct: 180 IR--MQDKNPYSFQSDVYAFGIVLYELMT 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 22 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 77
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L +E +L IA ++G+ +LH +
Sbjct: 78 ----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK----- 128
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
++ HRD KSNN+ L DLT I DFGLA + G+ +MAPEV
Sbjct: 129 ------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 182
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELAS 322
+ + + D+YA +VL+EL +
Sbjct: 183 IR--MQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 45 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 100
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L +E +L IA ++G+ +LH +
Sbjct: 101 ----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK----- 151
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
++ HRD KSNN+ L DLT I DFGLA + G+ +MAPEV
Sbjct: 152 ------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 205
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELAS 322
+ + + D+YA +VL+EL +
Sbjct: 206 IR--MQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 50/286 (17%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFL--MQDKQSWQSEQEIFKLPHMEHDNIL 169
SI+LV+ G+FG VW + N VAVK Q++ E + K ++HD ++
Sbjct: 13 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMK--TLQHDKLV 70
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN---IVTWEQLCRIALSMSKGLMHLH 226
R + E I+ +IT + +GSL DFLK + V +L + +++G+ ++
Sbjct: 71 RLYAVVTKEEPIY----IITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 126
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD ++ NVL+ L IADFGLA + E + G
Sbjct: 127 -----------RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA-REGAKFPI 174
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHP 346
++ APE AINF ++ ++++ ++L+E+ + P PG
Sbjct: 175 KWTAPE----AINFGCFT-IKSNVWSFGILLYEIVTYGK--IPYPGR------------- 214
Query: 347 SLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
+ D+ A+ P + + L D M+ CW AE R
Sbjct: 215 TNADVMSALSQGYRMPRMENCPDE------LYDIMKMCWKEKAEER 254
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 17 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 72
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L +E +L IA ++G+ +LH +
Sbjct: 73 ----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK----- 123
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
++ HRD KSNN+ L DLT I DFGLA + G+ +MAPEV
Sbjct: 124 ------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELAS 322
+ + + D+YA +VL+EL +
Sbjct: 178 IR--MQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 32/211 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 33 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 88
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L + +E +L IA ++G+ +LH +
Sbjct: 89 ----STKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK----- 139
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ--VGTRRYMAP 291
++ HRD KSNN+ L D T I DFGLA E + G + G+ +MAP
Sbjct: 140 ------SIIHRDLKSNNIFLHEDNTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAP 191
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELAS 322
EV+ + S + D+YA +VL+EL +
Sbjct: 192 EVIR--MQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 44 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 99
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L +E +L IA ++G+ +LH +
Sbjct: 100 ----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK----- 150
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
++ HRD KSNN+ L DLT I DFGLA + G+ +MAPEV
Sbjct: 151 ------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 204
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELAS 322
+ + + D+YA +VL+EL +
Sbjct: 205 IR--MQDKNPYSFQSDVYAFGIVLYELMT 231
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 17 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 72
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L +E +L IA ++G+ +LH +
Sbjct: 73 ----STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK----- 123
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
++ HRD KSNN+ L DLT I DFGLA + G+ +MAPEV
Sbjct: 124 ------SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV 177
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELAS 322
+ + + D+YA +VL+EL +
Sbjct: 178 IR--MQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 32/211 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 33 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 88
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L + +E +L IA ++G+ +LH +
Sbjct: 89 ----STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK----- 139
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ--VGTRRYMAP 291
++ HRD KSNN+ L D T I DFGLA E + G + G+ +MAP
Sbjct: 140 ------SIIHRDLKSNNIFLHEDNTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAP 191
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELAS 322
EV+ + S + D+YA +VL+EL +
Sbjct: 192 EVIR--MQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 32/211 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 17 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 72
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L +E +L IA ++G+ +LH +
Sbjct: 73 ----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK----- 123
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ--VGTRRYMAP 291
++ HRD KSNN+ L DLT I DFGLA E + G + G+ +MAP
Sbjct: 124 ------SIIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAP 175
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELAS 322
EV+ + + D+YA +VL+EL +
Sbjct: 176 EVIR--MQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 32/211 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 37 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 92
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L +E +L IA ++G+ +LH +
Sbjct: 93 ----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK----- 143
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ--VGTRRYMAP 291
++ HRD KSNN+ L DLT I DFGLA E + G + G+ +MAP
Sbjct: 144 ------SIIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAP 195
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELAS 322
EV+ + + D+YA +VL+EL +
Sbjct: 196 EVIR--MQDKNPYSFQSDVYAFGIVLYELMT 224
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 32/211 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLM-----QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V+K K+ + VAVK+ + Q Q++++E + + H NIL ++G
Sbjct: 45 GSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLR--KTRHVNILLFMGY- 100
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLHEEILPNK 233
S + ++T + E SL L +E +L IA ++G+ +LH +
Sbjct: 101 ----STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK----- 151
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ--VGTRRYMAP 291
++ HRD KSNN+ L DLT I DFGLA E + G + G+ +MAP
Sbjct: 152 ------SIIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRWSGSHQFEQLSGSILWMAP 203
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELAS 322
EV+ + + D+YA +VL+EL +
Sbjct: 204 EVIR--MQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 109/246 (44%), Gaps = 51/246 (20%)
Query: 119 VKAQGRFGAVW--KAKFKNENVAVKIF-LMQDKQSWQSE---QEIFKLPHMEHDNILR-Y 171
V +G FG V K K + AVK+ Q KQ E +E+ L ++H NI++ Y
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQL-----CRIALSMSKGLMHLH 226
E +G F+L+ + G L D I++ ++ RI + G+ ++H
Sbjct: 93 EFFEDKGY-----FYLVGEVYTGGELFD----EIISRKRFSEVDAARIIRQVLSGITYMH 143
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGLALLFEPGKPCGDTHGQV 283
K + HRD K N+LL+S D I DFGL+ FE K D ++
Sbjct: 144 -----------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD---KI 189
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP---PGEYRLPFSA 340
GT Y+APEVL G + + D+++ ++L+ L S C PP EY +
Sbjct: 190 GTAYYIAPEVLHGTYD------EKCDVWSTGVILYILLSGC----PPFNGANEYDILKKV 239
Query: 341 EVGDHP 346
E G +
Sbjct: 240 EKGKYT 245
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 119/275 (43%), Gaps = 58/275 (21%)
Query: 90 YFNPVPTLEPHPTSPPSPQ-QGCRSIQLVEVKAQGRFGAVW--KAKFKNENVAVKIF-LM 145
YF H T+ S + +G R V +G FG V K K + AVK+
Sbjct: 15 YFQGPGMFVQHSTAIFSDRYKGQR------VLGKGSFGEVILCKDKITGQECAVKVISKR 68
Query: 146 QDKQSWQSE---QEIFKLPHMEHDNILR-YIGAEKRGESIHTEFWLITAYHERGSLCDFL 201
Q KQ E +E+ L ++H NI++ Y E +G F+L+ + G L D
Sbjct: 69 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGY-----FYLVGEVYTGGELFD-- 121
Query: 202 KCNIVTWEQL-----CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS- 255
I++ ++ RI + G+ ++H K + HRD K N+LL+S
Sbjct: 122 --EIISRKRFSEVDAARIIRQVLSGITYMH-----------KNKIVHRDLKPENLLLESK 168
Query: 256 --DLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYAC 313
D I DFGL+ FE K D ++GT Y+APEVL G + + D+++
Sbjct: 169 SKDANIRIIDFGLSTHFEASKKMKD---KIGTAYYIAPEVLHGTYD------EKCDVWST 219
Query: 314 ALVLWELASRCSSVSPP---PGEYRLPFSAEVGDH 345
++L+ L S C PP EY + E G +
Sbjct: 220 GVILYILLSGC----PPFNGANEYDILKKVEKGKY 250
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 57/285 (20%)
Query: 126 GAVWKAKFKNENVAVKIFLMQD---KQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIH 182
G +WK +++ ++ VK+ ++D ++S +E +L H N+L +GA + + H
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 183 TEFWLITAYHERGSLCDFLKCN---IVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKP 239
LIT + GSL + L +V Q + AL M++G+ LH + +P
Sbjct: 84 PT--LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---------TLEP 132
Query: 240 AVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAIN 299
+ S +V++ D+TA I+ + F+ + G++ ++APE L+
Sbjct: 133 LIPRHALNSRSVMIDEDMTARISMADVKFSFQ-------SPGRMYAPAWVAPEALQKK-- 183
Query: 300 FSRDAFLR-IDMYACALVLWELASRCSSVSPPPGEYRLPFS----AEVGDHPSLEDMQEA 354
D R DM++ A++LWEL +R +PF+ E+G +LE
Sbjct: 184 -PEDTNRRSADMWSFAVLLWELVTR-----------EVPFADLSNMEIGMKVALEG---- 227
Query: 355 VVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVV 399
LRPT+P H L M+ C + D R +V
Sbjct: 228 -----LRPTIPPGISPHVSKL-----MKICMNEDPAKRPKFDMIV 262
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 109/245 (44%), Gaps = 51/245 (20%)
Query: 119 VKAQGRFGAVW--KAKFKNENVAVKIF-LMQDKQSWQSE---QEIFKLPHMEHDNILR-Y 171
V +G FG V K K + AVK+ Q KQ E +E+ L ++H NI++ Y
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQL-----CRIALSMSKGLMHLH 226
E +G F+L+ + G L D I++ ++ RI + G+ ++H
Sbjct: 117 EFFEDKGY-----FYLVGEVYTGGELFD----EIISRKRFSEVDAARIIRQVLSGITYMH 167
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGLALLFEPGKPCGDTHGQV 283
K + HRD K N+LL+S D I DFGL+ FE K D ++
Sbjct: 168 -----------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD---KI 213
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP---PGEYRLPFSA 340
GT Y+APEVL G + + D+++ ++L+ L S C PP EY +
Sbjct: 214 GTAYYIAPEVLHGTYD------EKCDVWSTGVILYILLSGC----PPFNGANEYDILKKV 263
Query: 341 EVGDH 345
E G +
Sbjct: 264 EKGKY 268
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 109/245 (44%), Gaps = 51/245 (20%)
Query: 119 VKAQGRFGAVW--KAKFKNENVAVKIF-LMQDKQSWQSE---QEIFKLPHMEHDNILR-Y 171
V +G FG V K K + AVK+ Q KQ E +E+ L ++H NI++ Y
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQL-----CRIALSMSKGLMHLH 226
E +G F+L+ + G L D I++ ++ RI + G+ ++H
Sbjct: 116 EFFEDKGY-----FYLVGEVYTGGELFD----EIISRKRFSEVDAARIIRQVLSGITYMH 166
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGLALLFEPGKPCGDTHGQV 283
K + HRD K N+LL+S D I DFGL+ FE K D ++
Sbjct: 167 -----------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKD---KI 212
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP---PGEYRLPFSA 340
GT Y+APEVL G + + D+++ ++L+ L S C PP EY +
Sbjct: 213 GTAYYIAPEVLHGTYD------EKCDVWSTGVILYILLSGC----PPFNGANEYDILKKV 262
Query: 341 EVGDH 345
E G +
Sbjct: 263 EKGKY 267
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 117 VEVKAQGRFGAVWKAKFKNEN--VAVKIFLM------QDKQSWQSEQEIFKLPHMEHDNI 168
++ +G+F V+KA+ KN N VA+K + +D + + +EI L + H NI
Sbjct: 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 74
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMHLH 226
+ + A +I F + L +K N ++T + L +GL +LH
Sbjct: 75 IGLLDAFGHKSNISLVFDFMET-----DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
+ + HRD K NN+LL + +ADFGLA F G P QV TR
Sbjct: 130 QH-----------WILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQVVTR 176
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRC 324
Y APE+L GA R + +DM+A +L EL R
Sbjct: 177 WYRAPELLFGA----RMYGVGVDMWAVGCILAELLLRV 210
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 37/226 (16%)
Query: 118 EVKAQGRFGAVWKAKFK--NENVAVKIFLMQDKQSWQS-EQEIFKLPHMEHDNILRYIGA 174
EV +G FG K + E + +K + D+++ ++ +E+ + +EH N+L++IG
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 175 EKRGESIHTEFWLITAYHERGSLCDFLKC--NIVTWEQLCRIALSMSKGLMHLHEEILPN 232
+ + ++ IT Y + G+L +K + W Q A ++ G+ +LH
Sbjct: 76 LYKDKRLN----FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---- 127
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF--EPGKPCG----------DTH 280
+ HRD S+N L++ + +ADFGLA L E +P G +
Sbjct: 128 -------NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 281 GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSS 326
VG +MAPE++ G R ++D+++ +VL E+ R ++
Sbjct: 181 TVVGNPYWMAPEMING-----RSYDEKVDVFSFGIVLCEIIGRVNA 221
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 20 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 76
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 77 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 132 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFP 179
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 180 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 22 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 78
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 79 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 133
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 134 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFP 181
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 182 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 23 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 79
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 80 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 134
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 135 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFP 182
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 183 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 222
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 70
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 71 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 126 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFP 173
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 174 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 16 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 72
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 73 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 127
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 128 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFP 175
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 176 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 215
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 70
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 71 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 126 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFP 173
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 174 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 15 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 71
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 72 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 126
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 127 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-REGAKFP 174
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 175 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 24 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 80
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 81 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 135
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 136 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFP 183
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 184 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 223
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 19 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 75
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 76 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 130
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 131 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFP 178
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 179 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 51/245 (20%)
Query: 119 VKAQGRFGAVW--KAKFKNENVAVKIF-LMQDKQSWQSE---QEIFKLPHMEHDNILR-Y 171
V +G FG V K K + AVK+ Q KQ E +E+ L ++H NI + Y
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQL-----CRIALSMSKGLMHLH 226
E +G F+L+ + G L D I++ ++ RI + G+ + H
Sbjct: 93 EFFEDKGY-----FYLVGEVYTGGELFD----EIISRKRFSEVDAARIIRQVLSGITYXH 143
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGLALLFEPGKPCGDTHGQV 283
K + HRD K N+LL+S D I DFGL+ FE K D ++
Sbjct: 144 -----------KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKD---KI 189
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP---PGEYRLPFSA 340
GT Y+APEVL G + + D+++ ++L+ L S C PP EY +
Sbjct: 190 GTAYYIAPEVLHGTYD------EKCDVWSTGVILYILLSGC----PPFNGANEYDILKKV 239
Query: 341 EVGDH 345
E G +
Sbjct: 240 EKGKY 244
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 20 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 76
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 77 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 132 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFP 179
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 180 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 219
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 9 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 65
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKC---NIVTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 66 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 120
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 121 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFP 168
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 169 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 208
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKS-LKQGSMSPDAFLAEANLMK--QLQHQRL 70
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 71 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 126 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFP 173
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 174 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 51/286 (17%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFK-NENVAVKIFL--MQDKQSWQSEQEIFKLPHMEHDNIL 169
S+QL++ G+FG VW + N VA+K +S+ E +I K ++HD ++
Sbjct: 10 SLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMK--KLKHDKLV 67
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLK---CNIVTWEQLCRIALSMSKGLMHLH 226
+ +++T Y +GSL DFLK + L +A ++ G+ ++
Sbjct: 68 QLYAVVS-----EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD +S N+L+ + L IADFGLA L E + G
Sbjct: 123 -----------RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTA-RQGAKFPI 170
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHP 346
++ APE A + R ++ D+++ ++L EL ++ R+P+ + +
Sbjct: 171 KWTAPE----AALYGRFT-IKSDVWSFGILLTELVTKG----------RVPYPG-MNNRE 214
Query: 347 SLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
LE V + R P+ ++L + M CW D E R
Sbjct: 215 VLEQ-----VERGYRMPCPQDCP-----ISLHELMIHCWKKDPEER 250
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 55/295 (18%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIFLMQDKQS--------WQSEQEIFKLPHMEHDNILR 170
+G FG V K + + VA+K ++ D + + ++E+F + ++ H NI++
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
G + EF + R L D K + + W R+ L ++ G+ ++ +
Sbjct: 88 LYGLMHNPPRMVMEFVPCGDLYHR--LLD--KAHPIKWSVKLRLMLDIALGIEYMQNQ-- 141
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKS-----DLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
P + HRD +S N+ L+S + A +ADFGL+ + G +G
Sbjct: 142 -------NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHSVSGLLGN 189
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDH 345
++MAPE + GA S + D Y+ A++L+ + + GE PF
Sbjct: 190 FQWMAPETI-GAEEESYTE--KADTYSFAMILYTILT---------GEG--PFDEYSYGK 235
Query: 346 PSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
+M + + LRPT+PE L + +E CW D + R S +V+
Sbjct: 236 IKFINM---IREEGLRPTIPEDCPPR-----LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 115/272 (42%), Gaps = 53/272 (19%)
Query: 121 AQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQS--EQEIFKLPHMEHDNILRYIGAEK 176
+G FG V+K E VA+KI +++ + +QEI L + I RY G+
Sbjct: 28 GKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSYL 87
Query: 177 RGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADS 236
+ T+ W+I Y GS D LK + + I + KGL +LH E
Sbjct: 88 KS----TKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSE-------- 135
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ----VGTRRYMAPE 292
HRD K+ NVLL +ADFG+A DT + VGT +MAPE
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVA------GQLTDTQIKRNXFVGTPFWMAPE 186
Query: 293 VL-EGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY---RLPFSAEVGDHPSL 348
V+ + A +F + D+++ + ELA PP + R+ F P+L
Sbjct: 187 VIKQSAYDF------KADIWSLGITAIELAKG----EPPNSDLHPMRVLFLIPKNSPPTL 236
Query: 349 E--------DMQEAVVHK--KLRPTLPETWKQ 370
E + EA ++K + RPT E K
Sbjct: 237 EGQHSKPFKEFVEACLNKDPRFRPTAKELLKH 268
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 34/216 (15%)
Query: 119 VKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRYIGAE 175
+ +G FG V+K + + VAVK + Q Q + E+ + H N+LR
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRL---- 100
Query: 176 KRGESIH-TEFWLITAYHERGSLCDFLKCNI-----VTWEQLCRIALSMSKGLMHLHEEI 229
RG + TE L+ Y GS+ L+ + W + RIAL ++GL +LH
Sbjct: 101 -RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH--- 156
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH---GQVGTR 286
D P + HRD K+ N+LL + A + DFGLA L + D H GT
Sbjct: 157 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD----YKDXHVXXAVRGTI 207
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++APE L + + D++ ++L EL +
Sbjct: 208 GHIAPEYLSTGKSSE-----KTDVFGYGVMLLELIT 238
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 27/204 (13%)
Query: 123 GRFGAV--WKAKFKNENVAVKIFLMQDKQSW----QSEQEIFKLPHMEHDNILRYIGAEK 176
G FG V + + VAVKI Q +S + ++EI L H +I++
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI- 80
Query: 177 RGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADS 236
S T+F+++ Y G L D++ C+ L ++IL
Sbjct: 81 ---STPTDFFMVMEYVSGGELFDYI----------CKHGRVEEMEARRLFQQILSAVDYC 127
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEG 296
++ V HRD K NVLL + + A IADFGL+ + G+ D+ G+ Y APEV+ G
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS---CGSPNYAAPEVISG 184
Query: 297 AINFSRDAFLRIDMYACALVLWEL 320
+ A +D+++C ++L+ L
Sbjct: 185 RLY----AGPEVDIWSCGVILYAL 204
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+FG VW + VAVK L Q S + +E + K ++H +
Sbjct: 10 TLKLVERLGAGQFGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMK--QLQHQRL 66
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 67 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 121
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HR+ ++ N+L+ L+ IADFGLA L E + G
Sbjct: 122 EER-----------NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTA-REGAKFP 169
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 170 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 123/290 (42%), Gaps = 61/290 (21%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+ ++L++ +G FG V ++ VAVK + D + E + + H N+++
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 172 IGA---EKRGESIHTEFWLITAYHERGSLCDFLKC---NIVTWEQLCRIALSMSKGLMHL 225
+G EK G +++T Y +GSL D+L+ +++ + L + +L + + + +L
Sbjct: 252 LGVIVEEKGG------LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
HRD + NVL+ D A ++DFGL + DT G++
Sbjct: 306 EGN-----------NFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDT-GKLPV 350
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDH 345
++ APE L FS + D+++ ++LWE+ S P R+P
Sbjct: 351 -KWTAPEALREK-KFSTKS----DVWSFGILLWEIYSFGRVPYP-----RIPL------- 392
Query: 346 PSLEDMQEAVVHKKLRPTLPETWKQHAGML---ALCDTMEECWDHDAEAR 392
K + P + + +K A A+ D M+ CW DA R
Sbjct: 393 ------------KDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATR 430
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 26/223 (11%)
Query: 107 PQQGCRSIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLP 161
P + Q VE +G +G V+KA K E VA+K I L + + S +EI L
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 162 HMEHDNILRYIGAEKRGESIHTEFWLITAYHERG-SLCDFLKCNIVTWEQLCRIALSMSK 220
+ H NI++ + + IHTE L + L DF+ + +T I L + K
Sbjct: 61 ELNHPNIVKLL------DVIHTENKLYLVFEFLSMDLKDFMDASALTG-----IPLPLIK 109
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
+ ++L A + V HRD K N+L+ ++ +ADFGLA F G P
Sbjct: 110 SYLF---QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYX 164
Query: 281 GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
+V T Y APE+L G +S +D+++ + E+ +R
Sbjct: 165 HEVVTLWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 203
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 26/272 (9%)
Query: 115 QLVEVKAQGRFGAVWKAKF---KNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNIL 169
+L EV G AV +A + K E VA+K ++ Q+ E +EI + H NI+
Sbjct: 13 ELQEVIGSGA-TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
Y + + E WL+ GS+ D +K + E + + + + E+
Sbjct: 72 SYYTSF----VVKDELWLVMKLLSGGSVLDIIKHIVAKGEH--KSGVLDESTIATILREV 125
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTR 286
L +K HRD K+ N+LL D + IADFG++ G + VGT
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHP 346
+MAPEV+E + + D+++ + ELA+ + P L + + D P
Sbjct: 186 CWMAPEVMEQVRGYD----FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ-NDPP 240
Query: 347 SLEDMQEAVVHKKLRPTLPETWKQHAGMLALC 378
SLE V K++ +++++ M++LC
Sbjct: 241 SLE---TGVQDKEMLKKYGKSFRK---MISLC 266
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 20/177 (11%)
Query: 121 AQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQSE-QEIFKLPHMEHDNILRYIGAEKR 177
+G G V A K + VAVK ++ +Q + E+ + HDN++ +
Sbjct: 54 GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLV 113
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ + E G+L D + + EQ+ + LS+ + L +LH +
Sbjct: 114 GD----ELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ--------- 160
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
V HRD KS+++LL SD ++DFG + K VGT +MAPEV+
Sbjct: 161 --GVIHRDIKSDSILLTSDGRIKLSDFGFCA--QVSKEVPKRKXLVGTPYWMAPEVI 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 101/241 (41%), Gaps = 45/241 (18%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKF------KNENVAVKIFLM----QDKQSWQSEQEIFKLP 161
R ++ + +G FG V + E VAVK Q + W+ E +I +
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT- 72
Query: 162 HMEHDNILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSK 220
+ H++I++Y G E +GE L+ Y GSL D+L + + QL A + +
Sbjct: 73 -LYHEHIIKYKGCCEDQGEK---SLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICE 128
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
G+ +LH + HR+ + NVLL +D I DFGLA K + H
Sbjct: 129 GMAYLHSQ-----------HYIHRNLAARNVLLDNDRLVKIGDFGLA------KAVPEGH 171
Query: 281 GQVGTRR-------YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
R + APE L+ + D+++ + L+EL + C S PP +
Sbjct: 172 EYYRVREDGDSPVFWYAPECLK-----EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK 226
Query: 334 Y 334
+
Sbjct: 227 F 227
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 119/272 (43%), Gaps = 26/272 (9%)
Query: 115 QLVEVKAQGRFGAVWKAKF---KNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNIL 169
+L EV G AV +A + K E VA+K ++ Q+ E +EI + H NI+
Sbjct: 18 ELQEVIGSGA-TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
Y + + E WL+ GS+ D +K + E + + + + E+
Sbjct: 77 SYYTSF----VVKDELWLVMKLLSGGSVLDIIKHIVAKGEH--KSGVLDESTIATILREV 130
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTR 286
L +K HRD K+ N+LL D + IADFG++ G + VGT
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHP 346
+MAPEV+E + + D+++ + ELA+ + P L + + D P
Sbjct: 191 CWMAPEVMEQVRGYD----FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ-NDPP 245
Query: 347 SLEDMQEAVVHKKLRPTLPETWKQHAGMLALC 378
SLE V K++ +++++ M++LC
Sbjct: 246 SLET---GVQDKEMLKKYGKSFRK---MISLC 271
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 45/241 (18%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKF------KNENVAVKIFLM----QDKQSWQSEQEIFKLP 161
R ++ + +G FG V + E VAVK Q + W+ E +I +
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRT- 72
Query: 162 HMEHDNILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSK 220
+ H++I++Y G E +GE L+ Y GSL D+L + + QL A + +
Sbjct: 73 -LYHEHIIKYKGCCEDQGEK---SLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICE 128
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
G+ +LH A Y HR+ + NVLL +D I DFGLA K + H
Sbjct: 129 GMAYLH-------AQHY----IHRNLAARNVLLDNDRLVKIGDFGLA------KAVPEGH 171
Query: 281 GQVGTRR-------YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
R + APE L+ + D+++ + L+EL + C S PP +
Sbjct: 172 EYYRVREDGDSPVFWYAPECLK-----EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK 226
Query: 334 Y 334
+
Sbjct: 227 F 227
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 117 VEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQS--EQEIFKLPHMEHDNILRYI 172
+E +G FG V+K + VA+KI +++ + +QEI L + + +Y
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
G+ +G ++ W+I Y GS D L+ Q+ + + KGL +LH E
Sbjct: 88 GSYLKG----SKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE---- 139
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
HRD K+ NVLL +ADFG+A + +T VGT +MAPE
Sbjct: 140 -------KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPE 190
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELA 321
V++ + S + D+++ + ELA
Sbjct: 191 VIQQSAYDS-----KADIWSLGITAIELA 214
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 125/295 (42%), Gaps = 55/295 (18%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIFLMQDKQS--------WQSEQEIFKLPHMEHDNILR 170
+G FG V K + + VA+K ++ D + + ++E+F + ++ H NI++
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
G + EF + R L D K + + W R+ L ++ G+ ++ +
Sbjct: 88 LYGLMHNPPRMVMEFVPCGDLYHR--LLD--KAHPIKWSVKLRLMLDIALGIEYMQNQ-- 141
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKS-----DLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
P + HRD +S N+ L+S + A +ADFG + + G +G
Sbjct: 142 -------NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-----QQSVHSVSGLLGN 189
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDH 345
++MAPE + GA S + D Y+ A++L+ + + GE PF
Sbjct: 190 FQWMAPETI-GAEEESYTE--KADTYSFAMILYTILT---------GEG--PFDEYSYGK 235
Query: 346 PSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
+M + + LRPT+PE L + +E CW D + R S +V+
Sbjct: 236 IKFINM---IREEGLRPTIPEDCPPR-----LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 34/227 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNI 168
+++LVE G+ G VW + VAVK L Q S + +E + K ++H +
Sbjct: 14 TLKLVERLGAGQAGEVWMGYYNGHTKVAVK-SLKQGSMSPDAFLAEANLMK--QLQHQRL 70
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHL 225
+R ++IT Y E GSL DFLK +T +L +A +++G+ +
Sbjct: 71 VRLYAV-----VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
E HRD ++ N+L+ L+ IADFGLA L E + G
Sbjct: 126 EER-----------NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTA-REGAKFP 173
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
++ APE AIN+ ++ D+++ ++L E+ + P PG
Sbjct: 174 IKWTAPE----AINYGTFT-IKSDVWSFGILLTEIVTHGR--IPYPG 213
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 168 ILRYIGAEKRGESIHTEFWLITAY-HERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLH 226
I++ + + IHTE L + H L F+ + +T I L + K +
Sbjct: 63 IVKLL------DVIHTENKLYLVFEHVHQDLKTFMDASALTG-----IPLPLIKSYLF-- 109
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 110 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTL 166
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 WYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 199
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 39/247 (15%)
Query: 92 NPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQ----- 146
NP PT+ P I+ +V +G FG V KA+ K + + + + +
Sbjct: 3 NPDPTI--------YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA 54
Query: 147 ---DKQSWQSEQEIF-KLPHMEHDNILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFL 201
D + + E E+ KL H H NI+ +GA E RG +L Y G+L DFL
Sbjct: 55 SKDDHRDFAGELEVLCKLGH--HPNIINLLGACEHRGY-----LYLAIEYAPHGNLLDFL 107
Query: 202 -KCNIVTWEQLCRIALSM-----SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS 255
K ++ + IA S S+ L+H ++ + HRD + N+L+
Sbjct: 108 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 167
Query: 256 DLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACAL 315
+ A IADFGL+ E T G++ R+MA E L ++ + D+++ +
Sbjct: 168 NYVAKIADFGLSRGQEV--YVKKTMGRLPV-RWMAIESLNYSVYTTNS-----DVWSYGV 219
Query: 316 VLWELAS 322
+LWE+ S
Sbjct: 220 LLWEIVS 226
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 36/223 (16%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN-----VAVKI----FLMQDKQSWQSEQEIFKLPHME 164
+++ EV G FG V + + K VA+K + + ++ + SE I + E
Sbjct: 18 VKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI--MGQFE 75
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGL 222
H NI+R G + ++T + E G+L FL+ N T QL + ++ G+
Sbjct: 76 HPNIIRLEGVVTNSMPVM----ILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGM 131
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ 282
+L E SY HRD + N+L+ S+L ++DFGL+ E
Sbjct: 132 RYLAEM-------SY----VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
Query: 283 VGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+G + R+ APE AI F R D ++ +V+WE+ S
Sbjct: 181 LGGKIPIRWTAPE----AIAF-RKFTSASDAWSYGIVMWEVMS 218
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 168 ILRYIGAEKRGESIHTEFWLITAY-HERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLH 226
I++ + + IHTE L + H L F+ + +T I L + K +
Sbjct: 67 IVKLL------DVIHTENKLYLVFEHVDQDLKKFMDASALTG-----IPLPLIKSYLF-- 113
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 114 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 170
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 171 WYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 203
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L DF+ + +T I L + K +
Sbjct: 64 IVKLL------DVIHTENKLYLVFEFLHQ-DLKDFMDASALTG-----IPLPLIKSYLF- 110
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 111 --QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 200
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 39/247 (15%)
Query: 92 NPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQ----- 146
NP PT+ P I+ +V +G FG V KA+ K + + + + +
Sbjct: 13 NPDPTI--------YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA 64
Query: 147 ---DKQSWQSEQEIF-KLPHMEHDNILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFL 201
D + + E E+ KL H H NI+ +GA E RG +L Y G+L DFL
Sbjct: 65 SKDDHRDFAGELEVLCKLGH--HPNIINLLGACEHRGY-----LYLAIEYAPHGNLLDFL 117
Query: 202 -KCNIVTWEQLCRIALSM-----SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS 255
K ++ + IA S S+ L+H ++ + HRD + N+L+
Sbjct: 118 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 177
Query: 256 DLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACAL 315
+ A IADFGL+ E T G++ R+MA E L ++ + D+++ +
Sbjct: 178 NYVAKIADFGLSRGQEV--YVKKTMGRLPV-RWMAIESLNYSVYTTNS-----DVWSYGV 229
Query: 316 VLWELAS 322
+LWE+ S
Sbjct: 230 LLWEIVS 236
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 36/223 (16%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN-----VAVKI----FLMQDKQSWQSEQEIFKLPHME 164
+++ EV G FG V + + K VA+K + + ++ + SE I + E
Sbjct: 16 VKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI--MGQFE 73
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGL 222
H NI+R G + ++T + E G+L FL+ N T QL + ++ G+
Sbjct: 74 HPNIIRLEGVVTNSMPVM----ILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGM 129
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ 282
+L E SY HRD + N+L+ S+L ++DFGL+ E
Sbjct: 130 RYLAEM-------SY----VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 283 VGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+G + R+ APE AI F R D ++ +V+WE+ S
Sbjct: 179 LGGKIPIRWTAPE----AIAF-RKFTSASDAWSYGIVMWEVMS 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 121 AQGRFGAVWKAK--FKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
+G FG V K K + AVK+ ++K + +E+ L ++H NI++
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL 90
Query: 176 KRGESIHTEFWLITAYHERGSLCD-FLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKA 234
+ S F+++ + G L D +K + RI + G+ ++H
Sbjct: 91 EDSSS----FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH-------- 138
Query: 235 DSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
K + HRD K N+LL+S D I DFGL+ F+ D ++GT Y+AP
Sbjct: 139 ---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD---RIGTAYYIAP 192
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP---PGEYRLPFSAEVGDH 345
EVL G + + D+++ ++L+ L S +PP EY + E G +
Sbjct: 193 EVLRGTYD------EKCDVWSAGVILYILLSG----TPPFYGKNEYDILKRVETGKY 239
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 125/295 (42%), Gaps = 55/295 (18%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIFLMQDKQS--------WQSEQEIFKLPHMEHDNILR 170
+G FG V K + + VA+K ++ D + + ++E+F + ++ H NI++
Sbjct: 28 GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
G + EF + R L D K + + W R+ L ++ G+ ++ +
Sbjct: 88 LYGLMHNPPRMVMEFVPCGDLYHR--LLD--KAHPIKWSVKLRLMLDIALGIEYMQNQ-- 141
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKS-----DLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
P + HRD +S N+ L+S + A +ADF L+ + G +G
Sbjct: 142 -------NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHSVSGLLGN 189
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDH 345
++MAPE + GA S + D Y+ A++L+ + + GE PF
Sbjct: 190 FQWMAPETI-GAEEESYTE--KADTYSFAMILYTILT---------GEG--PFDEYSYGK 235
Query: 346 PSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
+M + + LRPT+PE L + +E CW D + R S +V+
Sbjct: 236 IKFINM---IREEGLRPTIPEDCPPR-----LRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 11 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++T Y +GSL DFLK + + QL +A ++ G+ ++
Sbjct: 71 VSEEP--------IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 120
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 121 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKW 170
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 171 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 213
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW D E R
Sbjct: 214 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEER 248
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++T Y +GSL DFLK + + QL +A ++ G+ ++
Sbjct: 82 VSEEP--------IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 132 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKW 181
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 182 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 224
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW D E R
Sbjct: 225 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEER 259
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 119 VKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRYIGAE 175
+ +G FG V+K + + VAVK + Q Q + E+ + H N+LR
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL---- 92
Query: 176 KRGESIH-TEFWLITAYHERGSLCDFLKCNI-----VTWEQLCRIALSMSKGLMHLHEEI 229
RG + TE L+ Y GS+ L+ + W + RIAL ++GL +LH
Sbjct: 93 -RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH--- 148
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALL--FEPGKPCGDTHGQVGTRR 287
D P + HRD K+ N+LL + A + DFGLA L ++ G +G
Sbjct: 149 -----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIG--- 200
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++APE L + + D++ ++L EL +
Sbjct: 201 HIAPEYLSTGKSSE-----KTDVFGYGVMLLELIT 230
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 118/284 (41%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 13 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++T Y +GSL DFLK + + QL +A ++ G+ ++
Sbjct: 73 VSEEP--------IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 122
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 123 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKW 172
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 173 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 215
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW D E R
Sbjct: 216 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEER 250
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 28/221 (12%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHME 164
G + Q VE +G +G V+KA K E VA+K I L + + S +EI L +
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 165 HDNILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGL 222
H NI++ + + IHTE +L+ + + L F+ + +T I L + K
Sbjct: 61 HPNIVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSY 108
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ 282
+ ++L A + V HRD K N+L+ ++ +ADFGLA F G P +
Sbjct: 109 LF---QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHE 163
Query: 283 VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
V T Y APE+L G +S +D+++ + E+ +R
Sbjct: 164 VVTLWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 200
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 121 AQGRFGAVWKAK--FKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
+G FG V K K + AVK+ ++K + +E+ L ++H NI++
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL 90
Query: 176 KRGESIHTEFWLITAYHERGSLCD-FLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKA 234
+ S F+++ + G L D +K + RI + G+ ++H
Sbjct: 91 EDSSS----FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH-------- 138
Query: 235 DSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
K + HRD K N+LL+S D I DFGL+ F+ D ++GT Y+AP
Sbjct: 139 ---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD---RIGTAYYIAP 192
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP---PGEYRLPFSAEVGDH 345
EVL G + + D+++ ++L+ L S +PP EY + E G +
Sbjct: 193 EVLRGTYD------EKCDVWSAGVILYILLSG----TPPFYGKNEYDILKRVETGKY 239
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 40/237 (16%)
Query: 121 AQGRFGAVWKAK--FKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
+G FG V K K + AVK+ ++K + +E+ L ++H NI++
Sbjct: 31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL 90
Query: 176 KRGESIHTEFWLITAYHERGSLCD-FLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKA 234
+ S F+++ + G L D +K + RI + G+ ++H
Sbjct: 91 EDSSS----FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH-------- 138
Query: 235 DSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
K + HRD K N+LL+S D I DFGL+ F+ D ++GT Y+AP
Sbjct: 139 ---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD---RIGTAYYIAP 192
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP---PGEYRLPFSAEVGDH 345
EVL G + + D+++ ++L+ L S +PP EY + E G +
Sbjct: 193 EVLRGTYD------EKCDVWSAGVILYILLSG----TPPFYGKNEYDILKRVETGKY 239
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 45/241 (18%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKF------KNENVAVKIFLM----QDKQSWQSEQEIFKLP 161
R ++ + +G FG V + E VAVK Q + W+ E +I +
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRT- 89
Query: 162 HMEHDNILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSK 220
+ H++I++Y G E G + L+ Y GSL D+L + + QL A + +
Sbjct: 90 -LYHEHIIKYKGCCEDAGAA---SLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICE 145
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
G+ +LH A Y HRD + NVLL +D I DFGLA K + H
Sbjct: 146 GMAYLH-------AQHY----IHRDLAARNVLLDNDRLVKIGDFGLA------KAVPEGH 188
Query: 281 GQVGTRR-------YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
R + APE L+ + D+++ + L+EL + C S PP +
Sbjct: 189 EXYRVREDGDSPVFWYAPECLK-----EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK 243
Query: 334 Y 334
+
Sbjct: 244 F 244
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 30/219 (13%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMH 224
I++ + + IHTE L + +FL ++ T+ L I L + K +
Sbjct: 67 IVKLL------DVIHTENKLYLVF-------EFLHQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V
Sbjct: 114 ---QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV 168
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
T Y APE+L G +S +D+++ + E+ +R
Sbjct: 169 TLWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 30/225 (13%)
Query: 107 PQQGCRSIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLP 161
P + Q VE +G +G V+KA K E VA+K I L + + S +EI L
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 162 HMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSM 218
+ H NI++ + + IHTE L + +FL ++ + L I L +
Sbjct: 61 ELNHPNIVKLL------DVIHTENKLYLVF-------EFLSMDLKKFMDASALTGIPLPL 107
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
K + ++L A + V HRD K N+L+ ++ +ADFGLA F G P
Sbjct: 108 IKSYLF---QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRT 162
Query: 279 THGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
+V T Y APE+L G +S +D+++ + E+ +R
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 203
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERG-SLCDFLKCNIVTWEQLCRIALSMSKGLMHLH 226
I++ + + IHTE L + L DF+ + +T I L + K +
Sbjct: 66 IVKLL------DVIHTENKLYLVFEFLSMDLKDFMDASALTG-----IPLPLIKSYLF-- 112
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 113 -QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTL 169
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 170 WYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 202
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 107/216 (49%), Gaps = 32/216 (14%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+ ++L++ +G FG V ++ VAVK + D + E + + H N+++
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 70
Query: 172 IGA--EKRGESIHTEFWLITAYHERGSLCDFLKC---NIVTWEQLCRIALSMSKGLMHLH 226
+G E++G +++T Y +GSL D+L+ +++ + L + +L + + + +L
Sbjct: 71 LGVIVEEKGG-----LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL- 124
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
+ +++ HRD + NVL+ D A ++DFGL + DT G++
Sbjct: 125 ------EGNNF----VHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDT-GKLPV- 169
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ APE L A FS + D+++ ++LWE+ S
Sbjct: 170 KWTAPEALREAA-FSTKS----DVWSFGILLWEIYS 200
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 32/211 (15%)
Query: 121 AQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNILRYIGA 174
G FGAV+ A+ +E VA+K KQS + Q+I K L + H N ++Y G
Sbjct: 63 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC 122
Query: 175 EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMS--KGLMHLHEEILPN 232
R HT WL+ Y GS D L+ + +++ A++ +GL +LH
Sbjct: 123 YLRE---HTA-WLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---- 173
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
+ HRD K+ N+LL + DFG A + P VGT +MAPE
Sbjct: 174 -------NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF------VGTPYWMAPE 220
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELASR 323
V+ D ++D+++ + ELA R
Sbjct: 221 VILAMDEGQYDG--KVDVWSLGITCIELAER 249
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 118/284 (41%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + K+ H + +
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++T Y +GSL DFLK + + QL +A ++ G+ ++
Sbjct: 82 VSEEP--------IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 132 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKW 181
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 182 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 224
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW D E R
Sbjct: 225 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEER 259
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 107 PQQGCRSIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLP 161
P + Q VE +G +G V+KA K E VA+K I L + + S +EI L
Sbjct: 1 PLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 162 HMEHDNILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMS 219
+ H NI++ + + IHTE +L+ + + L F+ + +T I L +
Sbjct: 61 ELNHPNIVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLI 108
Query: 220 KGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT 279
K + ++L A + V HRD K N+L+ ++ +ADFGLA F G P
Sbjct: 109 KSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTY 163
Query: 280 HGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
+V T Y APE+L G +S +D+++ + E+ +R
Sbjct: 164 XHEVVTLWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 28/225 (12%)
Query: 106 SPQQGCRSIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKL 160
P + Q VE +G +G V+KA K E VA+K I L + + S +EI L
Sbjct: 1 GPLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 60
Query: 161 PHMEHDNILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSM 218
+ H NI++ + + IHTE +L+ + + L F+ + +T I L +
Sbjct: 61 KELNHPNIVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPL 108
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
K + ++L A + V HRD K N+L+ ++ +ADFGLA F G P
Sbjct: 109 IKSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRT 163
Query: 279 THGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
+V T Y APE+L G +S +D+++ + E+ +R
Sbjct: 164 YXHEVVTLWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 204
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 24/213 (11%)
Query: 113 SIQLVEVKAQGRFGAVWKAKF-KNENVAVKIFL--MQDKQSWQSEQEIFKLPHMEHDNIL 169
S++L + G+FG VW A + K+ VAVK +++ +E + K ++HD ++
Sbjct: 16 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT--LQHDKLV 73
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
+ + A E I+ +IT + +GSL DFLK + + + L + L+ +I
Sbjct: 74 K-LHAVVTKEPIY----IITEFMAKGSLLDFLKSDEGSKQPLPK--------LIDFSAQI 120
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYM 289
A + HRD ++ N+L+ + L IADFGLA + E + G ++
Sbjct: 121 AEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA-REGAKFPIKWT 179
Query: 290 APEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
APE AINF ++ D+++ ++L E+ +
Sbjct: 180 APE----AINFGSFT-IKSDVWSFGILLMEIVT 207
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 139 AVKIFLMQDKQSWQSEQ-EIFKLPHMEHDNILRYIGAE------KRGESIHTEFWLITAY 191
AVKI + S+ +E+ + + ++ +ILR + K +T F+L+
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 192 HERGSLCDFLKCNIVTWEQLCR-IALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNN 250
++G L D+L + E+ R I ++ + + LH K + HRD K N
Sbjct: 106 MKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH-----------KLNIVHRDLKPEN 154
Query: 251 VLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLR-ID 309
+LL D+ + DFG + +PG+ + GT Y+APE++E ++N + + + +D
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLREV---CGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 310 MYACALVLWELASRCSSVSPP 330
M++ ++++ L + SPP
Sbjct: 212 MWSTGVIMYTLLAG----SPP 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 27/201 (13%)
Query: 139 AVKIFLMQDKQSWQSEQ-EIFKLPHMEHDNILRYIGAE------KRGESIHTEFWLITAY 191
AVKI + S+ +E+ + + ++ +ILR + K +T F+L+
Sbjct: 33 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 92
Query: 192 HERGSLCDFLKCNIVTWEQLCR-IALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNN 250
++G L D+L + E+ R I ++ + + LH K + HRD K N
Sbjct: 93 MKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH-----------KLNIVHRDLKPEN 141
Query: 251 VLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLR-ID 309
+LL D+ + DFG + +PG+ + GT Y+APE++E ++N + + + +D
Sbjct: 142 ILLDDDMNIKLTDFGFSCQLDPGEKLREV---CGTPSYLAPEIIECSMNDNHPGYGKEVD 198
Query: 310 MYACALVLWELASRCSSVSPP 330
M++ ++++ L + SPP
Sbjct: 199 MWSTGVIMYTLLAG----SPP 215
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 24/213 (11%)
Query: 113 SIQLVEVKAQGRFGAVWKAKF-KNENVAVKIFL--MQDKQSWQSEQEIFKLPHMEHDNIL 169
S++L + G+FG VW A + K+ VAVK +++ +E + K ++HD ++
Sbjct: 189 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT--LQHDKLV 246
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
+ + A E I+ +IT + +GSL DFLK + + + L + L+ +I
Sbjct: 247 K-LHAVVTKEPIY----IITEFMAKGSLLDFLKSDEGSKQPLPK--------LIDFSAQI 293
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYM 289
A + HRD ++ N+L+ + L IADFGLA + E + G ++
Sbjct: 294 AEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA-REGAKFPIKWT 352
Query: 290 APEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
APE AINF ++ D+++ ++L E+ +
Sbjct: 353 APE----AINFGSFT-IKSDVWSFGILLMEIVT 380
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 118/271 (43%), Gaps = 43/271 (15%)
Query: 117 VEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQS--EQEIFKLPHMEHDNILRYI 172
+E +G FG V+K + VA+KI +++ + +QEI L + + +Y
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
G+ + T+ W+I Y GS D L+ + Q+ I + KGL +LH E
Sbjct: 92 GSYLK----DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---- 143
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
HRD K+ NVLL +ADFG+A + +T VGT +MAPE
Sbjct: 144 -------KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPE 194
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY---RLPFSAEVGDHPSLE 349
V++ + S + D+++ + ELA PP E ++ F + P+LE
Sbjct: 195 VIKQSAYDS-----KADIWSLGITAIELARG----EPPHSELHPMKVLFLIPKNNPPTLE 245
Query: 350 --------DMQEAVVHKK--LRPTLPETWKQ 370
+ EA ++K+ RPT E K
Sbjct: 246 GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 276
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 27/204 (13%)
Query: 123 GRFGAV--WKAKFKNENVAVKIFLMQDKQSW----QSEQEIFKLPHMEHDNILRYIGAEK 176
G FG V + + VAVKI Q +S + ++EI L H +I++
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI- 80
Query: 177 RGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADS 236
S T+F+++ Y G L D++ C+ L ++IL
Sbjct: 81 ---STPTDFFMVMEYVSGGELFDYI----------CKHGRVEEMEARRLFQQILSAVDYC 127
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEG 296
++ V HRD K NVLL + + A IADFGL+ + G+ + G+ Y APEV+ G
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS---CGSPNYAAPEVISG 184
Query: 297 AINFSRDAFLRIDMYACALVLWEL 320
+ A +D+++C ++L+ L
Sbjct: 185 RLY----AGPEVDIWSCGVILYAL 204
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 61/307 (19%)
Query: 101 PTSPPSPQQGCR--------SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFL---MQDK 148
PTS P Q + S++L QG FG VW + VA+K M +
Sbjct: 166 PTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE 225
Query: 149 QSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW 208
Q Q + KL H + + + E +++T Y +GSL DFLK + +
Sbjct: 226 AFLQEAQVMKKLRHEKLVQLYAVVSEEP--------IYIVTEYMSKGSLLDFLKGEMGKY 277
Query: 209 ---EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
QL +A ++ G+ ++ + HRD ++ N+L+ +L +ADFG
Sbjct: 278 LRLPQLVDMAAQIASGMAYVE-----------RMNYVHRDLRAANILVGENLVCKVADFG 326
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
L L E + G ++ APE A + R ++ D+++ ++L EL ++
Sbjct: 327 LGRLIEDNEYTA-RQGAKFPIKWTAPE----AALYGRFT-IKSDVWSFGILLTELTTKG- 379
Query: 326 SVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECW 385
R+P+ V + + D E P PE +L D M +CW
Sbjct: 380 ---------RVPYPGMV--NREVLDQVERGYRMPCPPECPE---------SLHDLMCQCW 419
Query: 386 DHDAEAR 392
D E R
Sbjct: 420 RKDPEER 426
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 117/284 (41%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++T Y +GSL DFLK + + QL +A ++ G+ ++
Sbjct: 82 VSEEP--------IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD + N+L+ +L +ADFGLA L E + G ++
Sbjct: 132 ---------RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKW 181
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 182 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 224
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW D E R
Sbjct: 225 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEER 259
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 134/304 (44%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIF-------LMQDKQSWQSEQEIFKLPHMEHD 166
+ L E+ G FG V++A + + VAVK + Q ++ + E ++F + ++H
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM--LKHP 66
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLH 226
NI+ G + L+ + G L L + + L A+ +++G+ +LH
Sbjct: 67 NIIALRGVCLK----EPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH 122
Query: 227 EE-ILPNKADSYKPAVAHRDFKSNNVLL-----KSDLT---AAIADFGLALLFEPGKPCG 277
+E I+P + HRD KS+N+L+ DL+ I DFGLA +
Sbjct: 123 DEAIVP---------IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM- 172
Query: 278 DTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLP 337
G +MAPEV+ ++ FS+ + D+++ ++LWEL + GE +P
Sbjct: 173 ---SAAGAYAWMAPEVIRASM-FSKGS----DVWSYGVLLWELLT---------GE--VP 213
Query: 338 FSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
F G + V KL +P T + ME+CW+ D +R S +
Sbjct: 214 FRGIDG-----LAVAYGVAMNKLALPIPSTCPE-----PFAKLMEDCWNPDPHSRPSFTN 263
Query: 398 VVER 401
++++
Sbjct: 264 ILDQ 267
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 26/218 (11%)
Query: 121 AQGRFGAVWKAKFKNE--NVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGA-- 174
+G FG V++AK K + N A+K + +++ + + +E+ L +EH I+RY A
Sbjct: 14 GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWL 73
Query: 175 -EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW-EQLCRIALSMSKGLMHLHEEILPN 232
+ E + + Y + LC K N+ W C I +H+ +I
Sbjct: 74 EKNTTEKLQPSSPKVYLYIQM-QLCR--KENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA----------LLFEPGKPCGDTHGQ 282
+ + HRD K +N+ D + DFGL + P GQ
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ 190
Query: 283 VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
VGT+ YM+PE + G ++S ++D+++ L+L+EL
Sbjct: 191 VGTKLYMSPEQIHGN-SYSH----KVDIFSLGLILFEL 223
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 121 AQGRFGAVWKAKFKN-ENVAVKIFLMQDKQSWQSEQEIFK-LPHMEHDNILRYIG-AEKR 177
G FG V+K ++ VA+K + Q + + + L H +++ IG ++R
Sbjct: 48 GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCN-----IVTWEQLCRIALSMSKGLMHLHEEILPN 232
E I LI Y E G+L L + ++WEQ I + ++GL +LH
Sbjct: 108 NEMI-----LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---- 158
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV---GTRRYM 289
A+ HRD KS N+LL + I DFG++ + G G TH GT Y+
Sbjct: 159 -------AIIHRDVKSINILLDENFVPKITDFGIS---KKGTELGQTHLXXVVKGTLGYI 208
Query: 290 APE-VLEGAINFSRDAFLRIDMYACALVLWE-LASRCSSVSPPPGEY--RLPFSAEVGDH 345
PE ++G + + D+Y+ +VL+E L +R + V P E ++ E ++
Sbjct: 209 DPEYFIKGRLT------EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 346 PSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVV 399
LE + + + K+R PE+ ++ DT +C +E R S V+
Sbjct: 263 GQLEQIVDPNLADKIR---PESLRKFG------DTAVKCLALSSEDRPSMGDVL 307
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 26/209 (12%)
Query: 117 VEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQS--EQEIFKLPHMEHDNILRYI 172
+E +G FG V+K + VA+KI +++ + +QEI L + + +Y
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
G+ + T+ W+I Y GS D L+ + Q+ I + KGL +LH E
Sbjct: 72 GSYLK----DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---- 123
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
HRD K+ NVLL +ADFG+A + +T VGT +MAPE
Sbjct: 124 -------KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF--VGTPFWMAPE 174
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELA 321
V++ + S + D+++ + ELA
Sbjct: 175 VIKQSAYDS-----KADIWSLGITAIELA 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 28/225 (12%)
Query: 106 SPQQGCRSIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKL 160
P + Q VE +G +G V+KA K E VA+K I L + + S +EI L
Sbjct: 1 GPLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 60
Query: 161 PHMEHDNILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSM 218
+ H NI++ + + IHTE +L+ + + L F+ + +T I L +
Sbjct: 61 KELNHPNIVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPL 108
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
K + ++L A + V HRD K N+L+ ++ +ADFGLA F G P
Sbjct: 109 IKSYLF---QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRT 163
Query: 279 THGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
+V T Y APE+L G +S +D+++ + E+ +R
Sbjct: 164 YTHEVVTLWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 204
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 32/211 (15%)
Query: 121 AQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNILRYIGA 174
G FGAV+ A+ +E VA+K KQS + Q+I K L + H N ++Y G
Sbjct: 24 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC 83
Query: 175 EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMS--KGLMHLHEEILPN 232
R HT WL+ Y GS D L+ + +++ A++ +GL +LH
Sbjct: 84 YLRE---HTA-WLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---- 134
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
+ HRD K+ N+LL + DFG A + P VGT +MAPE
Sbjct: 135 -------NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF------VGTPYWMAPE 181
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELASR 323
V+ D ++D+++ + ELA R
Sbjct: 182 VILAMDEGQYDG--KVDVWSLGITCIELAER 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 61/307 (19%)
Query: 101 PTSPPSPQQGCR--------SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIF---LMQDK 148
PTS P Q + S++L QG FG VW + VA+K M +
Sbjct: 248 PTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 307
Query: 149 QSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW 208
Q Q + KL H + + + E +++T Y +GSL DFLK +
Sbjct: 308 AFLQEAQVMKKLRHEKLVQLYAVVSEEP--------IYIVTEYMSKGSLLDFLKGETGKY 359
Query: 209 ---EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
QL +A ++ G+ ++ + HRD ++ N+L+ +L +ADFG
Sbjct: 360 LRLPQLVDMAAQIASGMAYVE-----------RMNYVHRDLRAANILVGENLVCKVADFG 408
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
LA L E + G ++ APE A + R ++ D+++ ++L EL ++
Sbjct: 409 LARLIEDNEYTA-RQGAKFPIKWTAPE----AALYGRFT-IKSDVWSFGILLTELTTKG- 461
Query: 326 SVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECW 385
R+P+ V + + D E P PE+ L D M +CW
Sbjct: 462 ---------RVPYPGMV--NREVLDQVERGYRMPCPPECPES---------LHDLMCQCW 501
Query: 386 DHDAEAR 392
+ E R
Sbjct: 502 RKEPEER 508
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++ Y +GSL DFLK + + QL +A ++ G+ ++
Sbjct: 82 VSEEP--------IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 132 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTA-RQGAKFPIKW 181
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 182 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 224
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW D E R
Sbjct: 225 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEER 259
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 27/201 (13%)
Query: 139 AVKIFLMQDKQSWQSEQ-EIFKLPHMEHDNILRYIGAE------KRGESIHTEFWLITAY 191
AVKI + S+ +E+ + + ++ +ILR + K +T F+L+
Sbjct: 46 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 105
Query: 192 HERGSLCDFLKCNIVTWEQLCR-IALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNN 250
++G L D+L + E+ R I ++ + + LH K + HRD K N
Sbjct: 106 MKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH-----------KLNIVHRDLKPEN 154
Query: 251 VLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLR-ID 309
+LL D+ + DFG + +PG+ GT Y+APE++E ++N + + + +D
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLRSV---CGTPSYLAPEIIECSMNDNHPGYGKEVD 211
Query: 310 MYACALVLWELASRCSSVSPP 330
M++ ++++ L + SPP
Sbjct: 212 MWSTGVIMYTLLAG----SPP 228
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 130/316 (41%), Gaps = 64/316 (20%)
Query: 116 LVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE-QEIFKLPHMEHDNILRYIGA 174
++E +G +G+V+KA K V I + + Q +EI + + ++++Y G+
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 175 EKRGESIHTEFWLITAYHERGSLCDF--LKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
+ +T+ W++ Y GS+ D L+ +T +++ I S KGL +LH
Sbjct: 93 YFK----NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH------ 142
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
+ + HRD K+ N+LL ++ A +ADFG+A + + +GT +MAPE
Sbjct: 143 ----FMRKI-HRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPE 195
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWEL---ASRCSSVSPPPGEY---RLPFSAEVGDHP 346
V++ Y C +W L A + PP + R F P
Sbjct: 196 VIQEI------------GYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP 243
Query: 347 SLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE------ 400
+ PE W + D +++C E R +A+ +++
Sbjct: 244 TFRK--------------PELWSDN-----FTDFVKQCLVKSPEQRATATQLLQHPFVRS 284
Query: 401 -RGMLALCDTMEECWD 415
+G+ L D + E D
Sbjct: 285 AKGVSILRDLINEAMD 300
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 71 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 117
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 118 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 174 LWYRAPEILLGXKYYST----AVDIWSLGCIFAEMVTR 207
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 39/247 (15%)
Query: 92 NPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQ----- 146
NP PT+ P I+ +V +G FG V KA+ K + + + + +
Sbjct: 10 NPDPTI--------YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA 61
Query: 147 ---DKQSWQSEQEIF-KLPHMEHDNILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFL 201
D + + E E+ KL H H NI+ +GA E RG +L Y G+L DFL
Sbjct: 62 SKDDHRDFAGELEVLCKLGH--HPNIINLLGACEHRGY-----LYLAIEYAPHGNLLDFL 114
Query: 202 -KCNIVTWEQLCRIALSM-----SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS 255
K ++ + IA S S+ L+H ++ + HR+ + N+L+
Sbjct: 115 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGE 174
Query: 256 DLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACAL 315
+ A IADFGL+ E T G++ R+MA E L ++ + D+++ +
Sbjct: 175 NYVAKIADFGLSRGQEV--YVKKTMGRLPV-RWMAIESLNYSVYTTNS-----DVWSYGV 226
Query: 316 VLWELAS 322
+LWE+ S
Sbjct: 227 LLWEIVS 233
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 106/216 (49%), Gaps = 32/216 (14%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+ ++L++ +G FG V ++ VAVK + D + E + + H N+++
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 172 IGA--EKRGESIHTEFWLITAYHERGSLCDFLKC---NIVTWEQLCRIALSMSKGLMHLH 226
+G E++G +++T Y +GSL D+L+ +++ + L + +L + + + +L
Sbjct: 65 LGVIVEEKGG-----LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL- 118
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
+ +++ HRD + NVL+ D A ++DFGL + DT G++
Sbjct: 119 ------EGNNF----VHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDT-GKLPV- 163
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ APE L FS + D+++ ++LWE+ S
Sbjct: 164 KWTAPEALREK-KFSTKS----DVWSFGILLWEIYS 194
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 71 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 117
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 118 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 173
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 174 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 207
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+ ++L++ +G FG V ++ VAVK + D + E + + H N+++
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-IKNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 172 IGA---EKRGESIHTEFWLITAYHERGSLCDFLKC---NIVTWEQLCRIALSMSKGLMHL 225
+G EK G +++T Y +GSL D+L+ +++ + L + +L + + + +L
Sbjct: 80 LGVIVEEKGG------LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ +++ HRD + NVL+ D A ++DFGL + DT G++
Sbjct: 134 -------EGNNF----VHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDT-GKLPV 178
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ APE L FS + D+++ ++LWE+ S
Sbjct: 179 -KWTAPEALREK-KFSTKS----DVWSFGILLWEIYS 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN-----VAVKIFLM--QDKQSWQSEQEIFKLPHMEHD 166
I + V G FG V + K VA+K + +KQ E + +H
Sbjct: 24 ITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 83
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMH 224
NI+ G + + + ++T Y E GSL FLK N T QL + +S G+ +
Sbjct: 84 NIIHLEGVVTKSKPVM----IVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKY 139
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCG-DTHGQV 283
L + HRD + N+L+ S+L ++DFGL+ + E T G
Sbjct: 140 LSDM-----------GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 188
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
R+ APE AI F R D+++ +V+WE+ S
Sbjct: 189 IPIRWTAPE----AIAF-RKFTSASDVWSYGIVMWEVVS 222
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 101/219 (46%), Gaps = 30/219 (13%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMH 224
I++ + + IHTE L + +FL ++ + L I L + K +
Sbjct: 65 IVKLL------DVIHTENKLYLVF-------EFLSMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V
Sbjct: 112 ---QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVV 166
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
T Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 TLWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 201
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 85
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V+ L +A +S + +L
Sbjct: 86 -EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----------- 133
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 188
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 189 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 56/290 (19%)
Query: 119 VKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAE 175
V +G +G V+ + + V + I + ++ S S+ +EI H++H NI++Y+G+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 87
Query: 176 KRGESIHTEFWLITAYHER---GSLCDFLKCN---IVTWEQLCRI-ALSMSKGLMHLHEE 228
+E I + E+ GSL L+ + EQ + +GL +LH+
Sbjct: 88 ------FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKS-DLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
+ HRD K +NVL+ + I+DFG + PC +T GT +
Sbjct: 142 -----------QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQ 188
Query: 288 YMAPEVLE-GAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHP 346
YMAPE+++ G + + A D+++ + E+A+ PP E P +A
Sbjct: 189 YMAPEIIDKGPRGYGKAA----DIWSLGCTIIEMATG----KPPFYELGEPQAAMF---- 236
Query: 347 SLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSAS 396
V K+ P +PE+ A L +C++ D + R A+
Sbjct: 237 -------KVGMFKVHPEIPESMSAEAKAFIL-----KCFEPDPDKRACAN 274
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V+ +K ++ V + +++ E +E + ++H N+++ +G +
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC----T 98
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
+ F+++T Y G+L D+L+ CN VT L +A +S + +L
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE----------- 147
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 202
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 203 L--AYNTFS----IKSDVWAFGVLLWEIATY--GMSPYPG 234
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 66 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 112
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 113 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 169 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 202
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 64 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 110
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 111 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 LWYRAPEILLGXKYYST----AVDIWSLGCIFAEMVTR 200
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 61/307 (19%)
Query: 101 PTSPPSPQQGCR--------SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIF---LMQDK 148
PTS P Q + S++L QG FG VW + VA+K M +
Sbjct: 165 PTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 224
Query: 149 QSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW 208
Q Q + KL H + + + E +++T Y +GSL DFLK +
Sbjct: 225 AFLQEAQVMKKLRHEKLVQLYAVVSEEP--------IYIVTEYMSKGSLLDFLKGETGKY 276
Query: 209 ---EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
QL +A ++ G+ ++ + HRD ++ N+L+ +L +ADFG
Sbjct: 277 LRLPQLVDMAAQIASGMAYVE-----------RMNYVHRDLRAANILVGENLVCKVADFG 325
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
LA L E + G ++ APE A + R ++ D+++ ++L EL ++
Sbjct: 326 LARLIEDNEYTA-RQGAKFPIKWTAPE----AALYGRFT-IKSDVWSFGILLTELTTKG- 378
Query: 326 SVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECW 385
R+P+ V + + D E P PE +L D M +CW
Sbjct: 379 ---------RVPYPGMV--NREVLDQVERGYRMPCPPECPE---------SLHDLMCQCW 418
Query: 386 DHDAEAR 392
+ E R
Sbjct: 419 RKEPEER 425
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 123/307 (40%), Gaps = 61/307 (19%)
Query: 101 PTSPPSPQQGCR--------SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIF---LMQDK 148
PTS P Q + S++L QG FG VW + VA+K M +
Sbjct: 165 PTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 224
Query: 149 QSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW 208
Q Q + KL H + + + E +++T Y +GSL DFLK +
Sbjct: 225 AFLQEAQVMKKLRHEKLVQLYAVVSEEP--------IYIVTEYMSKGSLLDFLKGETGKY 276
Query: 209 ---EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
QL +A ++ G+ ++ + HRD ++ N+L+ +L +ADFG
Sbjct: 277 LRLPQLVDMAAQIASGMAYVE-----------RMNYVHRDLRAANILVGENLVCKVADFG 325
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
LA L E + G ++ APE A + R ++ D+++ ++L EL ++
Sbjct: 326 LARLIEDNEYTA-RQGAKFPIKWTAPE----AALYGRFT-IKSDVWSFGILLTELTTKG- 378
Query: 326 SVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECW 385
R+P+ V + + D E P PE +L D M +CW
Sbjct: 379 ---------RVPYPGMV--NREVLDQVERGYRMPCPPECPE---------SLHDLMCQCW 418
Query: 386 DHDAEAR 392
+ E R
Sbjct: 419 RKEPEER 425
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 67 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 113
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 114 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 169
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 170 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 66 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 112
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 113 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 169 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 63 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 109
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 110 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 165
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 166 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 199
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++ Y +GSL DFLK + + QL +A ++ G+ ++
Sbjct: 82 VSEEP--------IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 132 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKW 181
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 182 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 224
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW D E R
Sbjct: 225 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEER 259
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 64 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 110
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 111 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 200
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 80
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V+ L +A +S + +L
Sbjct: 81 -EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----------- 128
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 183
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 184 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 215
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 64 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 110
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 111 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 200
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 117 VEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQS--EQEIFKLPHMEHDNILRYI 172
+E +G FG V+K + VA+KI +++ + +QEI L + + +Y
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
G+ + T+ W+I Y GS D L+ + Q+ I + KGL +LH E
Sbjct: 87 GSYLK----DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---- 138
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ----VGTRRY 288
HRD K+ NVLL +ADFG+A DT + VGT +
Sbjct: 139 -------KKIHRDIKAANVLLSEHGEVKLADFGVA------GQLTDTQIKRNXFVGTPFW 185
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELA 321
MAPEV++ + S + D+++ + ELA
Sbjct: 186 MAPEVIKQSAYDS-----KADIWSLGITAIELA 213
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 66 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 112
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 113 --QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 168
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 169 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 65 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 111
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 112 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 168 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 65 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 111
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 112 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 168 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 201
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++T Y +G L DFLK + + QL +A ++ G+ ++
Sbjct: 82 VSEEP--------IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 132 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKW 181
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 182 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 224
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW D E R
Sbjct: 225 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEER 259
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAV-KIFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+ KI L + + S +EI L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 64 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 110
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 111 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 200
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAV-KIFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+ KI L + + S +EI L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 63 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 109
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 110 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 166 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 64 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 110
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 111 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 200
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 80
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V+ L +A +S + +L
Sbjct: 81 -EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----------- 128
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 183
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 184 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 215
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 63 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 109
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 110 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 166 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 65 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 111
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 112 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 167
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 168 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 201
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G+FG V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 78
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V+ L +A +S + +L
Sbjct: 79 -EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----------- 126
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT G + ++ APE
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTXTAHAGAKFPIKWTAPES 181
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 182 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 213
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 63 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 109
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 110 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 165
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 166 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 199
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 15 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++T Y +GSL DFLK + QL +A ++ G+ ++
Sbjct: 75 VSEEP--------IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 124
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 125 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKW 174
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 175 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 217
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW + E R
Sbjct: 218 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEER 252
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 97 LEPHPTSPPS-------PQQGCRSIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ 146
++PH P+ + +I + +V G FG V + K + ++V I ++
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 147 ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK 202
+KQ E + +H NI+R G + + + ++T Y E GSL FL+
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----IVTEYMENGSLDSFLR 138
Query: 203 CNIVTWE--QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA 260
+ + QL + ++ G+ +L + HRD + N+L+ S+L
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDM-----------GYVHRDLAARNILINSNLVCK 187
Query: 261 IADFGLALLFEPG-KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
++DFGLA + E + T G R+ +PE AI + R D+++ +VLWE
Sbjct: 188 VSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWE 242
Query: 320 LAS 322
+ S
Sbjct: 243 VMS 245
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 65 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 111
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 112 --QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 167
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 168 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 64 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 110
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 111 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 200
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 85
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 86 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 133
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 188
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 189 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 220
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 63 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 109
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 110 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 165
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 166 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 199
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 117/284 (41%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++ Y +GSL DFLK + + QL +A ++ G+ ++
Sbjct: 82 VSEEP--------IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 132 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKW 181
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 182 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 224
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW D E R
Sbjct: 225 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEER 259
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 85
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 86 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 133
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 188
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 189 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 220
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 64 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 110
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L A + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 111 --QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVT 166
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 200
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 118/275 (42%), Gaps = 51/275 (18%)
Query: 117 VEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQS--EQEIFKLPHMEHDNILRYI 172
+E +G FG V+K + VA+KI +++ + +QEI L + + +Y
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
G+ + T+ W+I Y GS D L+ + Q+ I + KGL +LH E
Sbjct: 72 GSYLK----DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---- 123
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ----VGTRRY 288
HRD K+ NVLL +ADFG+A DT + VGT +
Sbjct: 124 -------KKIHRDIKAANVLLSEHGEVKLADFGVA------GQLTDTQIKRNXFVGTPFW 170
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY---RLPFSAEVGDH 345
MAPEV++ + S + D+++ + ELA PP E ++ F +
Sbjct: 171 MAPEVIKQSAYDS-----KADIWSLGITAIELARG----EPPHSELHPMKVLFLIPKNNP 221
Query: 346 PSLE--------DMQEAVVHKK--LRPTLPETWKQ 370
P+LE + EA ++K+ RPT E K
Sbjct: 222 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 48/281 (17%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 19 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILP 231
+ E +++T Y +GSL DFLK + +L + L+ + +I
Sbjct: 79 VSEEP--------IYIVTEYMNKGSLLDFLKGETGKYLRLPQ--------LVDMSAQIAS 122
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
A + HRD ++ N+L+ +L +ADFGLA L E + G ++ AP
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAP 181
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDM 351
E A + R ++ D+++ ++L EL ++ R+P+ V + + D
Sbjct: 182 E----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREVLDQ 224
Query: 352 QEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
E P PE+ L D M +CW + E R
Sbjct: 225 VERGYRMPCPPECPES---------LHDLMCQCWRKEPEER 256
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 111/291 (38%), Gaps = 47/291 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
QG G V+ A V I M +Q + E EI + ++ NI+ Y+ +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ Y GSL D + + Q+ + + L LH
Sbjct: 89 GD----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--------- 135
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGA 297
V HRD KS+N+LL D + + DFG P + T VGT +MAPEV+
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVV--- 188
Query: 298 INFSRDAFL-RIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVV 356
+R A+ ++D+++ ++ E+ G+ P L + +
Sbjct: 189 ---TRKAYGPKVDIWSLGIMAIEMIE--------------------GEPPYLNENPLRAL 225
Query: 357 HKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVERGMLALC 407
+ PE D + C D D E R SA +++ L +
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 84
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 85 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 132
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 187
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 188 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 219
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 82
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 83 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 130
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 185
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 186 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 217
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 93
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 94 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 141
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 196
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 197 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 228
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 82
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 83 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 130
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 185
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 186 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 217
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 56/290 (19%)
Query: 119 VKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAE 175
V +G +G V+ + + V + I + ++ S S+ +EI H++H NI++Y+G+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS- 73
Query: 176 KRGESIHTEFWLITAYHER---GSLCDFLKCN---IVTWEQLCRI-ALSMSKGLMHLHEE 228
+E I + E+ GSL L+ + EQ + +GL +LH+
Sbjct: 74 ------FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKS-DLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
+ HRD K +NVL+ + I+DFG + PC +T GT +
Sbjct: 128 -----------QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETF--TGTLQ 174
Query: 288 YMAPEVLE-GAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHP 346
YMAPE+++ G + + A D+++ + E+A+ PP E P +A
Sbjct: 175 YMAPEIIDKGPRGYGKAA----DIWSLGCTIIEMATG----KPPFYELGEPQAAMF---- 222
Query: 347 SLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSAS 396
V K+ P +PE+ A L +C++ D + R A+
Sbjct: 223 -------KVGMFKVHPEIPESMSAEAKAFIL-----KCFEPDPDKRACAN 260
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 42/227 (18%)
Query: 105 PSPQQGCRSIQLVEVKAQGRFGAV---WKAKFKNENVAVKIF------LMQDKQSWQSEQ 155
P QG R + G +G+V + A+ + + VAVK L+ +++++
Sbjct: 19 PQRLQGLRPV------GSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYR--- 68
Query: 156 EIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCR 213
E+ L H++H+N++ + SI +E +L+T L + +KC ++ E +
Sbjct: 69 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQF 127
Query: 214 IALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPG 273
+ + +GL ++H + HRD K +NV + D I DFGLA
Sbjct: 128 LVYQLLRGLKYIH-----------SAGIIHRDLKPSNVAVNEDCELRILDFGLA-----R 171
Query: 274 KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
+ + G V TR Y APE++ +++++ +D+++ ++ EL
Sbjct: 172 QADEEMTGYVATRWYRAPEIMLNWMHYNQT----VDIWSVGCIMAEL 214
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 80
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 81 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 128
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 183
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 184 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 215
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 121 AQGRFGAVWKAKFK--NENVAVKIFLMQDKQSW---QSEQEIFKLPHMEHDNILRYIGAE 175
QG FG V+KA+ + + VA+K LM++++ + +EI L ++H+N++ I
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC 86
Query: 176 KRGESIHTE----FWLITAYHERGSLCDFLKCNIV--TWEQLCRIALSMSKGLMHLHEEI 229
+ S + +L+ + E L L +V T ++ R+ + GL ++H
Sbjct: 87 RTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH--- 142
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH--GQVGTRR 287
+ + HRD K+ NVL+ D +ADFGLA F K +V T
Sbjct: 143 --------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEV 342
Y PE+L G RD ID++ ++ E+ +R + +++L +++
Sbjct: 195 YRPPELLLG----ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 245
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 81
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 82 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 129
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH----GQVGTRRYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G ++ APE
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAPAGAKFPIKWTAPES 184
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 185 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 216
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 42/227 (18%)
Query: 105 PSPQQGCRSIQLVEVKAQGRFGAV---WKAKFKNENVAVKIF------LMQDKQSWQSEQ 155
P QG R + G +G+V + A+ + + VAVK L+ +++++
Sbjct: 27 PQRLQGLRPV------GSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYR--- 76
Query: 156 EIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCR 213
E+ L H++H+N++ + SI +E +L+T L + +KC ++ E +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKCQALSDEHVQF 135
Query: 214 IALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPG 273
+ + +GL ++H + HRD K +NV + D I DFGLA
Sbjct: 136 LVYQLLRGLKYIH-----------SAGIIHRDLKPSNVAVNEDSELRILDFGLA-----R 179
Query: 274 KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
+ + G V TR Y APE++ +++++ +D+++ ++ EL
Sbjct: 180 QADEEMTGYVATRWYRAPEIMLNWMHYNQT----VDIWSVGCIMAEL 222
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 123 GRFGAV--WKAKFKNENVAVKIFLMQDKQSW----QSEQEIFKLPHMEHDNILRYIGAEK 176
G FG V K + VAVKI Q +S + +EI L H +I++
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI- 85
Query: 177 RGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADS 236
S ++ +++ Y G L D++ C+ K L ++IL
Sbjct: 86 ---STPSDIFMVMEYVSGGELFDYI----------CKNGRLDEKESRRLFQQILSGVDYC 132
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEG 296
++ V HRD K NVLL + + A IADFGL+ + G+ + G+ Y APEV+ G
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS---CGSPNYAAPEVISG 189
Query: 297 AINFSRDAFLRIDMYACALVLWEL 320
+ A +D+++ ++L+ L
Sbjct: 190 RLY----AGPEVDIWSSGVILYAL 209
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 80
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 81 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 128
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 183
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 184 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 215
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 121 AQGRFGAVWKAKFK--NENVAVKIFLMQDKQS---WQSEQEIFKLPHMEHDNILRYIGAE 175
QG FG V+KA+ + + VA+K LM++++ + +EI L ++H+N++ I
Sbjct: 26 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC 85
Query: 176 KRGESIHTE----FWLITAYHERGSLCDFLKCNIV--TWEQLCRIALSMSKGLMHLHEEI 229
+ S + +L+ + E L L +V T ++ R+ + GL ++H
Sbjct: 86 RTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH--- 141
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPC--GDTHGQVGTRR 287
+ + HRD K+ NVL+ D +ADFGLA F K +V T
Sbjct: 142 --------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 193
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEV 342
Y PE+L G RD ID++ ++ E+ +R + +++L +++
Sbjct: 194 YRPPELLLG----ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 244
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 97 LEPHPTSPPS-------PQQGCRSIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ 146
++PH P+ + +I + +V G FG V + K + ++V I ++
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 147 ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK 202
+KQ E + +H NI+R G + + + ++T Y E GSL FL+
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----IVTEYMENGSLDSFLR 138
Query: 203 CNIVTWE--QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA 260
+ + QL + ++ G+ +L + HRD + N+L+ S+L
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDM-----------GYVHRDLAARNILINSNLVCK 187
Query: 261 IADFGLALLFEPG-KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
++DFGL+ + E + T G R+ +PE AI + R D+++ +VLWE
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWE 242
Query: 320 LAS 322
+ S
Sbjct: 243 VMS 245
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 82
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 83 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 130
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH----GQVGTRRYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G ++ APE
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAPAGAKFPIKWTAPES 185
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 186 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 217
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 121 AQGRFGAVWKAKFK--NENVAVKIFLMQDKQSW---QSEQEIFKLPHMEHDNILRYIGAE 175
QG FG V+KA+ + + VA+K LM++++ + +EI L ++H+N++ I
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC 86
Query: 176 KRGESIHTE----FWLITAYHERGSLCDFLKCNIV--TWEQLCRIALSMSKGLMHLHEEI 229
+ S + +L+ + E L L +V T ++ R+ + GL ++H
Sbjct: 87 RTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH--- 142
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPC--GDTHGQVGTRR 287
+ + HRD K+ NVL+ D +ADFGLA F K +V T
Sbjct: 143 --------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEV 342
Y PE+L G RD ID++ ++ E+ +R + +++L +++
Sbjct: 195 YRPPELLLG----ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 245
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 50/261 (19%)
Query: 82 YRQRKLGSYFNPVPTLEPHPTSPPSPQQGCRS---------IQLVEVKAQGRFGAVWKAK 132
Y Q KL P P P + P + RS I + ++ G G V +
Sbjct: 15 YFQGKL-----PEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGR 69
Query: 133 FK---NENVAVKI------FLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHT 183
+ +V V I + + ++ + SE I + +H NI+R G RG
Sbjct: 70 LRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI--MGQFDHPNIIRLEGVVTRGRLA-- 125
Query: 184 EFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAV 241
++T Y E GSL FL+ + T QL + + G+ +L +
Sbjct: 126 --MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD-----------LGY 172
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFE--PGKPCGDTHGQVGTRRYMAPEVLEGAIN 299
HRD + NVL+ S+L ++DFGL+ + E P T G++ R+ APE AI
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPI-RWTAPE----AIA 227
Query: 300 FSRDAFLRIDMYACALVLWEL 320
F R D+++ +V+WE+
Sbjct: 228 F-RTFSSASDVWSFGVVMWEV 247
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 50/261 (19%)
Query: 82 YRQRKLGSYFNPVPTLEPHPTSPPSPQQGCRS---------IQLVEVKAQGRFGAVWKAK 132
Y Q KL P P P + P + RS I + ++ G G V +
Sbjct: 15 YFQGKL-----PEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGR 69
Query: 133 FK---NENVAVKI------FLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHT 183
+ +V V I + + ++ + SE I + +H NI+R G RG
Sbjct: 70 LRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI--MGQFDHPNIIRLEGVVTRGRLA-- 125
Query: 184 EFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAV 241
++T Y E GSL FL+ + T QL + + G+ +L +
Sbjct: 126 --MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD-----------LGY 172
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFE--PGKPCGDTHGQVGTRRYMAPEVLEGAIN 299
HRD + NVL+ S+L ++DFGL+ + E P T G++ R+ APE AI
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPI-RWTAPE----AIA 227
Query: 300 FSRDAFLRIDMYACALVLWEL 320
F R D+++ +V+WE+
Sbjct: 228 F-RTFSSASDVWSFGVVMWEV 247
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 107/235 (45%), Gaps = 29/235 (12%)
Query: 121 AQGRFGAVWKAKFK--NENVAVKIFLMQDKQSW---QSEQEIFKLPHMEHDNILRYIGAE 175
QG FG V+KA+ + + VA+K LM++++ + +EI L ++H+N++ I
Sbjct: 27 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEIC 86
Query: 176 KRGESIHTE----FWLITAYHERGSLCDFLKCNIV--TWEQLCRIALSMSKGLMHLHEEI 229
+ S + +L+ + E L L +V T ++ R+ + GL ++H
Sbjct: 87 RTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH--- 142
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPC--GDTHGQVGTRR 287
+ + HRD K+ NVL+ D +ADFGLA F K +V T
Sbjct: 143 --------RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEV 342
Y PE+L G RD ID++ ++ E+ +R + +++L +++
Sbjct: 195 YRPPELLLG----ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 97 LEPHPTSPPS-------PQQGCRSIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ 146
++PH P+ + +I + +V G FG V + K + ++V I ++
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 147 ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK 202
+KQ E + +H NI+R G + + + ++T Y E GSL FL+
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----IVTEYMENGSLDSFLR 138
Query: 203 CNIVTWE--QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA 260
+ + QL + ++ G+ +L + HRD + N+L+ S+L
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDM-----------GYVHRDLAARNILINSNLVCK 187
Query: 261 IADFGLALLFEPG-KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
++DFGL+ + E + T G R+ +PE AI + R D+++ +VLWE
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWE 242
Query: 320 LAS 322
+ S
Sbjct: 243 VMS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 97 LEPHPTSPPS-------PQQGCRSIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ 146
++PH P+ + +I + +V G FG V + K + ++V I ++
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 147 ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK 202
+KQ E + +H NI+R G + + + ++T Y E GSL FL+
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----IVTEYMENGSLDSFLR 138
Query: 203 CNIVTWE--QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA 260
+ + QL + ++ G+ +L + HRD + N+L+ S+L
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDM-----------GFVHRDLAARNILINSNLVCK 187
Query: 261 IADFGLALLFEPG-KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
++DFGL+ + E + T G R+ +PE AI + R D+++ +VLWE
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWE 242
Query: 320 LAS 322
+ S
Sbjct: 243 VMS 245
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 48/281 (17%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 19 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILP 231
+ E +++T Y +GSL DFLK + +L + L+ + +I
Sbjct: 79 VSEEP--------IYIVTEYMNKGSLLDFLKGETGKYLRLPQ--------LVDMSAQIAS 122
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
A + HRD ++ N+L+ +L +ADFGLA L E + G ++ AP
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTA-RQGAKFPIKWTAP 181
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDM 351
E A + R ++ D+++ ++L EL ++ R+P+ V + + D
Sbjct: 182 E----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREVLDQ 224
Query: 352 QEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
E P PE+ L D M +CW + E R
Sbjct: 225 VERGYRMPCPPECPES---------LHDLMCQCWRKEPEER 256
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 97 LEPHPTSPPS-------PQQGCRSIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ 146
++PH P+ + +I + +V G FG V + K + ++V I ++
Sbjct: 21 VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 80
Query: 147 ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK 202
+KQ E + +H NI+R G + + + ++T Y E GSL FL+
Sbjct: 81 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----IVTEYMENGSLDSFLR 136
Query: 203 CNIVTWE--QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA 260
+ + QL + ++ G+ +L + HRD + N+L+ S+L
Sbjct: 137 KHDAQFTVIQLVGMLRGIASGMKYLSDM-----------GYVHRDLAARNILINSNLVCK 185
Query: 261 IADFGLALLFEPG-KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
++DFGL+ + E + T G R+ +PE AI + R D+++ +VLWE
Sbjct: 186 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWE 240
Query: 320 LAS 322
+ S
Sbjct: 241 VMS 243
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 97 LEPHPTSPPS-------PQQGCRSIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ 146
++PH P+ + +I + +V G FG V + K + ++V I ++
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 147 ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK 202
+KQ E + +H NI+R G + + + ++T Y E GSL FL+
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----IVTEYMENGSLDSFLR 138
Query: 203 CNIVTWE--QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA 260
+ + QL + ++ G+ +L + HRD + N+L+ S+L
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDM-----------GYVHRDLAARNILINSNLVCK 187
Query: 261 IADFGLALLFEPG-KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
++DFGL+ + E + T G R+ +PE AI + R D+++ +VLWE
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWE 242
Query: 320 LAS 322
+ S
Sbjct: 243 VMS 245
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 113 SIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDN 167
+ Q VE +G +G V+KA K E VA+K I L + + S +EI L + H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 168 ILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHL 225
I++ + + IHTE +L+ + + L F+ + +T I L + K +
Sbjct: 64 IVKLL------DVIHTENKLYLVFEFLHQ-DLKKFMDASALTG-----IPLPLIKSYLF- 110
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
++L + + V HRD K N+L+ ++ +ADFGLA F G P +V T
Sbjct: 111 --QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVT 166
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
Y APE+L G +S +D+++ + E+ +R
Sbjct: 167 LWYRAPEILLGCKYYST----AVDIWSLGCIFAEMVTR 200
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 106/243 (43%), Gaps = 37/243 (15%)
Query: 97 LEPHPTSPPS-------PQQGCRSIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ 146
++PH P+ + +I + +V G FG V + K + ++V I ++
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 147 ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK 202
+KQ E + +H NI+R G + + + ++T Y E GSL FL+
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----IVTEYMENGSLDSFLR 138
Query: 203 CNIVTWE--QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA 260
+ + QL + ++ G+ +L + HRD + N+L+ S+L
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDM-----------GYVHRDLAARNILINSNLVCK 187
Query: 261 IADFGLALLFEPG-KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
++DFGL+ + E + T G R+ +PE AI + R D+++ +VLWE
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWE 242
Query: 320 LAS 322
+ S
Sbjct: 243 VMS 245
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 78
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V+ L +A +S + +L
Sbjct: 79 -EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----------- 126
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT G + ++ APE
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTFTAHAGAKFPIKWTAPES 181
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 182 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 213
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 110/261 (42%), Gaps = 52/261 (19%)
Query: 126 GAVWKAKFKNENVAVKIFLMQD---KQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIH 182
G +WK +++ ++ VK+ ++D ++S +E +L H N+L +GA + + H
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 183 TEFWLITAYHERGSLCDFLKCN---IVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKP 239
LIT + GSL + L +V Q + AL ++G LH + +P
Sbjct: 84 PT--LITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH---------TLEP 132
Query: 240 AVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAIN 299
+ S +V + D TA I+ + F+ + G+ ++APE L+
Sbjct: 133 LIPRHALNSRSVXIDEDXTARISXADVKFSFQ-------SPGRXYAPAWVAPEALQKK-- 183
Query: 300 FSRDAFLR-IDMYACALVLWELASRCSSVSPPPGEYRLPFS----AEVGDHPSLEDMQEA 354
D R D ++ A++LWEL +R +PF+ E+G +LE
Sbjct: 184 -PEDTNRRSADXWSFAVLLWELVTR-----------EVPFADLSNXEIGXKVALEG---- 227
Query: 355 VVHKKLRPTLPETWKQHAGML 375
LRPT+P H L
Sbjct: 228 -----LRPTIPPGISPHVSKL 243
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 12 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E ++T Y +GSL DFLK + QL +A ++ G+ ++
Sbjct: 72 VSEEP--------IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE-- 121
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 122 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTA-RQGAKFPIKW 171
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 172 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 214
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW + E R
Sbjct: 215 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKEPEER 249
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ----DKQSWQSEQEIFKLPHMEH 165
+I + +V G FG V + K + ++V I ++ +KQ E + +H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 166 DNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV--TWEQLCRIALSMSKGLM 223
NI+R G + + + ++T Y E GSL FL+ + T QL + ++ G+
Sbjct: 94 PNIIRLEGVVTKSKPVM----IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 149
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPG-KPCGDTHGQ 282
+L + HRD + N+L+ S+L ++DFGL+ + E + T G
Sbjct: 150 YLSDM-----------GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 283 VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
R+ +PE AI + R D+++ +VLWE+ S
Sbjct: 199 KIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ----DKQSWQSEQEIFKLPHMEH 165
+I + +V G FG V + K + ++V I ++ +KQ E + +H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 166 DNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV--TWEQLCRIALSMSKGLM 223
NI+R G + + + ++T Y E GSL FL+ + T QL + ++ G+
Sbjct: 77 PNIIRLEGVVTKSKPVM----IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPG-KPCGDTHGQ 282
+L + HRD + N+L+ S+L ++DFGL+ + E + T G
Sbjct: 133 YLSDM-----------GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 283 VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
R+ +PE AI + R D+++ +VLWE+ S
Sbjct: 182 KIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWEVMS 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 26/227 (11%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGA-- 174
+E+ G FG V+KAK + + I ++ + ++E+E+ L ++H NI+ Y G
Sbjct: 17 IELIGSGGFGQVFKAKHRIDGKTYVIRRVK-YNNEKAEREVKALAKLDHVNIVHYNGCWD 75
Query: 175 ------EKRGESIHTEFW---LITAYHERGSLCDFLK---CNIVTWEQLC--RIALSMSK 220
E +S+ + + + C F++ C+ T EQ R + K
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 135
Query: 221 GL-MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT 279
L + L E+I + + HRD K +N+ L I DFGL K G
Sbjct: 136 VLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL---KNDGKR 192
Query: 280 HGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSS 326
GT RYM+PE + S+D +D+YA L+L EL C +
Sbjct: 193 TRSKGTLRYMSPEQIS-----SQDYGKEVDLYALGLILAELLHVCDT 234
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 231 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 287
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V+ L +A +S + +L
Sbjct: 288 -EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----------- 335
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HR+ + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 390
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 391 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 422
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 105/220 (47%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 85
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 86 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 133
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT G + ++ APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTXTAHAGAKFPIKWTAPES 188
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 189 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 220
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 105/243 (43%), Gaps = 37/243 (15%)
Query: 97 LEPHPTSPPS-------PQQGCRSIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ 146
++PH P+ + +I + +V G FG V + K + ++V I ++
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 147 ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK 202
+KQ E + +H NI+R G + + + ++T Y E GSL FL+
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----IVTEYMENGSLDSFLR 138
Query: 203 CNIVTWE--QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA 260
+ + QL + ++ G+ +L + HRD + N+L+ S+L
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDM-----------GYVHRDLAARNILINSNLVCK 187
Query: 261 IADFGLALLFEPG-KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
++DFGL + E + T G R+ +PE AI + R D+++ +VLWE
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWE 242
Query: 320 LAS 322
+ S
Sbjct: 243 VMS 245
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 40/216 (18%)
Query: 113 SIQLVEVKAQGRFGAVWKAKF-KNENVAVKIFL--MQDKQSWQSEQEIFKLPHMEHDNIL 169
S++L + G+FG VW A + K+ VAVK +++ +E + K ++HD ++
Sbjct: 183 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKT--LQHDKLV 240
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
+ + A E I+ +IT + +GSL DFLK + + + L + L+ +I
Sbjct: 241 K-LHAVVTKEPIY----IITEFMAKGSLLDFLKSDEGSKQPLPK--------LIDFSAQI 287
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR--- 286
A + HRD ++ N+L+ + L IADFGLA +VG +
Sbjct: 288 AEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA--------------RVGAKFPI 333
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ APE AINF ++ D+++ ++L E+ +
Sbjct: 334 KWTAPE----AINFGSFT-IKSDVWSFGILLMEIVT 364
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 115 QLVEVKAQGRFGAVWKAKFKNENVAV--KIFLMQDKQSWQSE--QEIFKLPHMEHDNILR 170
Q +E +G +G V+KAK + +I L + + S +EI L + H NI+
Sbjct: 24 QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
I + IH+E L + +F++ ++ + L S+ ++L++ +L
Sbjct: 84 LI------DVIHSERCLTLVF-------EFMEKDLKKVLDENKTGLQDSQIKIYLYQ-LL 129
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
A ++ + HRD K N+L+ SD +ADFGLA F G P +V T Y A
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRA 187
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
P+VL G+ +S +D+++ + E+ +
Sbjct: 188 PDVLMGSKKYSTS----VDIWSIGCIFAEMIT 215
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 98/237 (41%), Gaps = 45/237 (18%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKF------KNENVAVKIFLM----QDKQSWQSEQEIFKLP 161
R ++ + +G FG V + E VAVK Q + WQ E EI +
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT- 66
Query: 162 HMEHDNILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSK 220
+ H++I++Y G E +GE L+ Y GSL D+L + V QL A + +
Sbjct: 67 -LYHEHIVKYKGCCEDQGEK---SVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICE 122
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
G+ +LH A Y HR + NVLL +D I DFGLA K + H
Sbjct: 123 GMAYLH-------AQHY----IHRALAARNVLLDNDRLVKIGDFGLA------KAVPEGH 165
Query: 281 GQVGTRR-------YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
R + APE L+ + D+++ + L+EL + C S P
Sbjct: 166 EYYRVREDGDSPVFWYAPECLKEC-----KFYYASDVWSFGVTLYELLTYCDSNQSP 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 54/258 (20%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSE--QEIFK----LPHMEHD 166
+L++ +G F V A+ + VAVKI DK S Q++F+ + + H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKII---DKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 167 NILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIAL-SMSKGLM 223
NI++ E I TE +L+ Y G + D+L + E+ R + +
Sbjct: 74 NIVKLF------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV 283
+ H++ + HRD K+ N+LL +D+ IADFG + F G DT
Sbjct: 128 YCHQKF-----------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DTF--C 173
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVG 343
G+ Y APE+ +G + +D+++ ++L+ L S LPF
Sbjct: 174 GSPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS-----------LPF----- 213
Query: 344 DHPSLEDMQEAVVHKKLR 361
D +L++++E V+ K R
Sbjct: 214 DGQNLKELRERVLRGKYR 231
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 98/237 (41%), Gaps = 45/237 (18%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKF------KNENVAVKIFLM----QDKQSWQSEQEIFKLP 161
R ++ + +G FG V + E VAVK Q + WQ E EI +
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRT- 67
Query: 162 HMEHDNILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSK 220
+ H++I++Y G E +GE L+ Y GSL D+L + V QL A + +
Sbjct: 68 -LYHEHIVKYKGCCEDQGEK---SVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICE 123
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
G+ +LH A Y HR + NVLL +D I DFGLA K + H
Sbjct: 124 GMAYLH-------AQHY----IHRALAARNVLLDNDRLVKIGDFGLA------KAVPEGH 166
Query: 281 GQVGTRR-------YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
R + APE L+ + D+++ + L+EL + C S P
Sbjct: 167 EYYRVREDGDSPVFWYAPECLKEC-----KFYYASDVWSFGVTLYELLTYCDSNQSP 218
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 32/211 (15%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDK----QSWQSEQEIFKLPHMEHDNIL 169
LV+ +G +G V A + E VAVKI M+ ++ + E I K+ + H+N++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM--LNHENVV 67
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEE 228
++ G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 68 KFYGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-- 121
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD K N+LL I+DFGLA +F + GT Y
Sbjct: 122 ---------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 289 MAPEVLEGAINFSRDAFLR--IDMYACALVL 317
+APE+L+ R F +D+++C +VL
Sbjct: 173 VAPELLK------RREFHAEPVDVWSCGIVL 197
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 80
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++I + G+L D+L+ CN V+ L +A +S + +L
Sbjct: 81 -EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----------- 128
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 183
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 184 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 215
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 80
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++I + G+L D+L+ CN V+ L +A +S + +L
Sbjct: 81 -EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----------- 128
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 183
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 184 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 215
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 122/307 (39%), Gaps = 61/307 (19%)
Query: 101 PTSPPSPQQGCR--------SIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIF---LMQDK 148
PTS P Q + S++L QG FG VW + VA+K M +
Sbjct: 165 PTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 224
Query: 149 QSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW 208
Q Q + KL H + + + E +++ Y +GSL DFLK +
Sbjct: 225 AFLQEAQVMKKLRHEKLVQLYAVVSEEP--------IYIVGEYMSKGSLLDFLKGETGKY 276
Query: 209 ---EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
QL +A ++ G+ ++ + HRD ++ N+L+ +L +ADFG
Sbjct: 277 LRLPQLVDMAAQIASGMAYVE-----------RMNYVHRDLRAANILVGENLVCKVADFG 325
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
LA L E + G ++ APE A + R ++ D+++ ++L EL ++
Sbjct: 326 LARLIEDNEYTA-RQGAKFPIKWTAPE----AALYGRFT-IKSDVWSFGILLTELTTKG- 378
Query: 326 SVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECW 385
R+P+ V + + D E P PE +L D M +CW
Sbjct: 379 ---------RVPYPGMV--NREVLDQVERGYRMPCPPECPE---------SLHDLMCQCW 418
Query: 386 DHDAEAR 392
+ E R
Sbjct: 419 RKEPEER 425
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 54/258 (20%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSE--QEIFK----LPHMEHD 166
+L++ +G F V A+ + VAVKI DK S Q++F+ + + H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKII---DKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 167 NILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIAL-SMSKGLM 223
NI++ E I TE +L+ Y G + D+L + E+ R + +
Sbjct: 74 NIVKLF------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV 283
+ H++ + HRD K+ N+LL +D+ IADFG + F G DT
Sbjct: 128 YCHQKF-----------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DTF--C 173
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVG 343
G+ Y APE+ +G + +D+++ ++L+ L S LPF
Sbjct: 174 GSPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS-----------LPF----- 213
Query: 344 DHPSLEDMQEAVVHKKLR 361
D +L++++E V+ K R
Sbjct: 214 DGQNLKELRERVLRGKYR 231
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 54/284 (19%)
Query: 117 VEVK-AQGRFGAVWKAKFKNEN-VAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRY 171
+EVK QG FG VW + VA+K M + Q Q + KL H + +
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLHEE 228
+ E +++ Y +G L DFLK + + QL +A ++ G+ ++
Sbjct: 82 VSEEP--------IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE-- 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD ++ N+L+ +L +ADFGLA L E + G ++
Sbjct: 132 ---------RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKW 181
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
APE A + R ++ D+++ ++L EL ++ R+P+ V + +
Sbjct: 182 TAPE----AALYGRFT-IKSDVWSFGILLTELTTKG----------RVPYPGMV--NREV 224
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEAR 392
D E P PE+ L D M +CW D E R
Sbjct: 225 LDQVERGYRMPCPPECPES---------LHDLMCQCWRKDPEER 259
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 32/211 (15%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDK----QSWQSEQEIFKLPHMEHDNIL 169
LV+ +G +G V A + E VAVKI M+ ++ + E I K+ + H+N++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM--LNHENVV 68
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEE 228
++ G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 69 KFYGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-- 122
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD K N+LL I+DFGLA +F + GT Y
Sbjct: 123 ---------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
Query: 289 MAPEVLEGAINFSRDAFLR--IDMYACALVL 317
+APE+L+ R F +D+++C +VL
Sbjct: 174 VAPELLK------RREFHAEPVDVWSCGIVL 198
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 115 QLVEVKAQGRFGAVWKAKFKNENVAV--KIFLMQDKQSWQSE--QEIFKLPHMEHDNILR 170
Q +E +G +G V+KAK + +I L + + S +EI L + H NI+
Sbjct: 24 QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
I + IH+E L + +F++ ++ + L S+ ++L++ +L
Sbjct: 84 LI------DVIHSERCLTLVF-------EFMEKDLKKVLDENKTGLQDSQIKIYLYQ-LL 129
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
A ++ + HRD K N+L+ SD +ADFGLA F G P +V T Y A
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYRA 187
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
P+VL G+ +S +D+++ + E+ +
Sbjct: 188 PDVLMGSKKYSTS----VDIWSIGCIFAEMIT 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 110/291 (37%), Gaps = 47/291 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
QG G V+ A V I M +Q + E EI + ++ NI+ Y+ +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ Y GSL D + + Q+ + + L LH
Sbjct: 89 GD----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--------- 135
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGA 297
V HRD KS+N+LL D + + DFG P + VGT +MAPEV+
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSEMVGTPYWMAPEVV--- 188
Query: 298 INFSRDAFL-RIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVV 356
+R A+ ++D+++ ++ E+ G+ P L + +
Sbjct: 189 ---TRKAYGPKVDIWSLGIMAIEMIE--------------------GEPPYLNENPLRAL 225
Query: 357 HKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVERGMLALC 407
+ PE D + C D D E R SA +++ L +
Sbjct: 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 49/294 (16%)
Query: 121 AQGRFGAVWKAKFKN-ENVAVKIFLMQDKQSWQSEQEIFK-LPHMEHDNILRYIG-AEKR 177
G FG V+K ++ VA+K + Q + + + L H +++ IG ++R
Sbjct: 48 GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCN-----IVTWEQLCRIALSMSKGLMHLHEEILPN 232
E I LI Y E G+L L + ++WEQ I + ++GL +LH
Sbjct: 108 NEMI-----LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---- 158
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV---GTRRYM 289
A+ HRD KS N+LL + I DFG++ + G TH GT Y+
Sbjct: 159 -------AIIHRDVKSINILLDENFVPKITDFGIS---KKGTELDQTHLXXVVKGTLGYI 208
Query: 290 APE-VLEGAINFSRDAFLRIDMYACALVLWE-LASRCSSVSPPPGEY--RLPFSAEVGDH 345
PE ++G + + D+Y+ +VL+E L +R + V P E ++ E ++
Sbjct: 209 DPEYFIKGRLT------EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 346 PSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVV 399
LE + + + K+R PE+ ++ DT +C +E R S V+
Sbjct: 263 GQLEQIVDPNLADKIR---PESLRKFG------DTAVKCLALSSEDRPSMGDVL 307
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 228 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 284
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 285 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 332
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HR+ + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 387
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 388 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 419
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 32/211 (15%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDK----QSWQSEQEIFKLPHMEHDNIL 169
LV+ +G +G V A + E VAVKI M+ ++ + E I K+ + H+N++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM--LNHENVV 67
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEE 228
++ G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 68 KFYGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH-- 121
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD K N+LL I+DFGLA +F + GT Y
Sbjct: 122 ---------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 289 MAPEVLEGAINFSRDAFLR--IDMYACALVL 317
+APE+L+ R F +D+++C +VL
Sbjct: 173 VAPELLK------RREFHAEPVDVWSCGIVL 197
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 85
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++I + G+L D+L+ CN V L +A +S + +L
Sbjct: 86 -EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 133
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 188
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 189 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 220
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 106/220 (48%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 270 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 326
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++IT + G+L D+L+ CN V L +A +S + +L
Sbjct: 327 -EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 374
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HR+ + N L+ + +ADFGL+ L GDT+ G + ++ APE
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-----TGDTYTAHAGAKFPIKWTAPES 429
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 430 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 461
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 113/270 (41%), Gaps = 52/270 (19%)
Query: 102 TSPPSPQQGCRSIQLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQ--SEQEI 157
TS Q + +L + +G F V A+ VAVKI DK S Q++
Sbjct: 5 TSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKII---DKTQLNPTSLQKL 61
Query: 158 FK----LPHMEHDNILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQL 211
F+ + + H NI++ E I TE +L+ Y G + D+L + E+
Sbjct: 62 FREVRIMKILNHPNIVKLF------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE 115
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFE 271
R +I+ ++ + HRD K+ N+LL D+ IADFG + F
Sbjct: 116 ARAKF----------RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT 165
Query: 272 PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPP 331
G DT G+ Y APE+ +G + +D+++ ++L+ L S
Sbjct: 166 VGNKL-DTF--CGSPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS------- 211
Query: 332 GEYRLPFSAEVGDHPSLEDMQEAVVHKKLR 361
LPF D +L++++E V+ K R
Sbjct: 212 ----LPF-----DGQNLKELRERVLRGKYR 232
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 30/219 (13%)
Query: 114 IQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ----DKQSWQSEQEIFKLPHMEHD 166
I++ +V G FG V + K + V I ++ DKQ E + +H
Sbjct: 31 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 90
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMH 224
NI+ G + + + +IT Y E GSL FL+ N T QL + + G+ +
Sbjct: 91 NIIHLEGVVTKCKPVM----IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKY 146
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCG-DTHGQV 283
L + + HRD + N+L+ S+L ++DFG++ + E T G
Sbjct: 147 LSDM-----------SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 195
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
R+ APE AI + R D+++ +V+WE+ S
Sbjct: 196 IPIRWTAPE----AIAY-RKFTSASDVWSYGIVMWEVMS 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 36 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 93
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LKC ++ + +C + +GL ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKCQHLSNDHICYFLYQILRGLKYIHS------ 146
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 147 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 202 IMLNSKGYTKS----IDIWSVGCILAEMLS 227
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 27/204 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
QG G V+ A V I M +Q + E EI + ++ NI+ Y+ +
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ Y GSL D + + Q+ + + L LH
Sbjct: 89 GD----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--------- 135
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGA 297
V HRD KS+N+LL D + + DFG P + VGT +MAPEV+
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSXMVGTPYWMAPEVV--- 188
Query: 298 INFSRDAFL-RIDMYACALVLWEL 320
+R A+ ++D+++ ++ E+
Sbjct: 189 ---TRKAYGPKVDIWSLGIMAIEM 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 115 QLVEVKAQGRFGAVWKAKFK--NENVAVKIFLMQDKQ--SWQSEQEIFKLPHMEHDNILR 170
QL + +G +G V A K E VA+K DK + ++ +EI L H +H+NI+
Sbjct: 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIIT 73
Query: 171 YIGAEKRGESIHT--EFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEE 228
+ R +S E ++I + L + +++ + + + + LH
Sbjct: 74 IFNIQ-RPDSFENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEP-----GKPCGDTHGQ- 282
V HRD K +N+L+ S+ + DFGLA + + +P G G
Sbjct: 132 -----------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 283 --VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
V TR Y APEV+ + +SR +D+++C +L EL R
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSR----AMDVWSCGCILAELFLR 219
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 52 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 109
Query: 176 KRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
R +I + +L+T H G+ L LK ++ + +C + +GL ++H
Sbjct: 110 IRAPTIEQMKDVYLVT--HLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---- 163
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAP 291
V HRD K +N+LL + I DFGLA + +P G V TR Y AP
Sbjct: 164 -------NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELAS 322
E++ + +++ ID+++ +L E+ S
Sbjct: 217 EIMLNSKGYTKS----IDIWSVGCILAEMLS 243
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 27/204 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
QG G V+ A V I M +Q + E EI + ++ NI+ Y+ +
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ Y GSL D + + Q+ + + L LH
Sbjct: 90 GD----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--------- 136
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGA 297
V HRD KS+N+LL D + + DFG P + VGT +MAPEV+
Sbjct: 137 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSXMVGTPYWMAPEVV--- 189
Query: 298 INFSRDAFL-RIDMYACALVLWEL 320
+R A+ ++D+++ ++ E+
Sbjct: 190 ---TRKAYGPKVDIWSLGIMAIEM 210
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
+G G V A+ K+ V + +M ++ + E E+ + +H N++ +
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
GE E W++ + + G+L D + + EQ+ + ++ + L +LH +
Sbjct: 114 GE----ELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ--------- 160
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGA 297
V HRD KS+++LL D ++DFG P VGT +MAPEV+ +
Sbjct: 161 --GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKXLVGTPYWMAPEVISRS 216
Query: 298 INFSRDAFLRIDMYACALVLWELA 321
+ + +D+++ +++ E+
Sbjct: 217 LYAT-----EVDIWSLGIMVIEMV 235
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 115 QLVEVKAQGRFGAVWKAKFK--NENVAVKIFLMQDKQ--SWQSEQEIFKLPHMEHDNILR 170
QL + +G +G V A K E VA+K DK + ++ +EI L H +H+NI+
Sbjct: 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIIT 73
Query: 171 YIGAEKRGESIHT--EFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEE 228
+ R +S E ++I + L + +++ + + + + LH
Sbjct: 74 IFNIQ-RPDSFENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEP-----GKPCGDTHGQ- 282
V HRD K +N+L+ S+ + DFGLA + + +P G G
Sbjct: 132 -----------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 283 --VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
V TR Y APEV+ + +SR +D+++C +L EL R
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSR----AMDVWSCGCILAELFLR 219
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 39/227 (17%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIG--- 173
+E+ G FG V+KAK + + I ++ + ++E+E+ L ++H NI+ Y G
Sbjct: 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVK-YNNEKAEREVKALAKLDHVNIVHYNGCWD 74
Query: 174 --------AEKRGESIHTE-FWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSM----S 219
+ K T+ ++ + ++G+L +++ E+L ++ AL + +
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQIT 132
Query: 220 KGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT 279
KG+ ++H + L N RD K +N+ L I DFGL K G
Sbjct: 133 KGVDYIHSKKLIN-----------RDLKPSNIFLVDTKQVKIGDFGLVTSL---KNDGKR 178
Query: 280 HGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSS 326
GT RYM+PE + S+D +D+YA L+L EL C +
Sbjct: 179 XRSKGTLRYMSPEQIS-----SQDYGKEVDLYALGLILAELLHVCDT 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 115 QLVEVKAQGRFGAVWKAKFK--NENVAVKIFLMQDKQ--SWQSEQEIFKLPHMEHDNILR 170
QL + +G +G V A K E VA+K DK + ++ +EI L H +H+NI+
Sbjct: 14 QLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIIT 73
Query: 171 YIGAEKRGESIHT--EFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEE 228
+ R +S E ++I + L + +++ + + + + LH
Sbjct: 74 IFNIQ-RPDSFENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEP-----GKPCGDTHGQ- 282
V HRD K +N+L+ S+ + DFGLA + + +P G G
Sbjct: 132 -----------NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 283 --VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
V TR Y APEV+ + +SR +D+++C +L EL R
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSR----AMDVWSCGCILAELFLR 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 30/219 (13%)
Query: 114 IQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ----DKQSWQSEQEIFKLPHMEHD 166
I++ +V G FG V + K + V I ++ DKQ E + +H
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMH 224
NI+ G + + + +IT Y E GSL FL+ N T QL + + G+ +
Sbjct: 70 NIIHLEGVVTKCKPVM----IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKY 125
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCG-DTHGQV 283
L + SY HRD + N+L+ S+L ++DFG++ + E T G
Sbjct: 126 LSDM-------SY----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 174
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
R+ APE AI + R D+++ +V+WE+ S
Sbjct: 175 IPIRWTAPE----AIAY-RKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 96/219 (43%), Gaps = 30/219 (13%)
Query: 114 IQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ----DKQSWQSEQEIFKLPHMEHD 166
I++ +V G FG V + K + V I ++ DKQ E + +H
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMH 224
NI+ G + + + +IT Y E GSL FL+ N T QL + + G+ +
Sbjct: 76 NIIHLEGVVTKCKPVM----IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKY 131
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCG-DTHGQV 283
L + SY HRD + N+L+ S+L ++DFG++ + E T G
Sbjct: 132 LSDM-------SY----VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK 180
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
R+ APE AI + R D+++ +V+WE+ S
Sbjct: 181 IPIRWTAPE----AIAY-RKFTSASDVWSYGIVMWEVMS 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 39/248 (15%)
Query: 100 HPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKA--KFKNENVAVKIF----LMQDKQSWQS 153
+P S + + Q+V+ +G FG V A + VA+KI L + +
Sbjct: 1 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 60
Query: 154 EQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCR 213
E+EI L + H +I++ K + I ++ + L D++ EQ R
Sbjct: 61 EREISYLRLLRHPHIIKLYDVIKSKDEI-----IMVIEYAGNELFDYIVQRDKMSEQEAR 115
Query: 214 IALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPG 273
++I+ ++ + HRD K N+LL L IADFGL+ + G
Sbjct: 116 ----------RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165
Query: 274 KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+ G+ Y APEV+ G + A +D+++C ++L+ + R
Sbjct: 166 NFLKTS---CGSPNYAAPEVISGKLY----AGPEVDVWSCGVILYVMLCR---------- 208
Query: 334 YRLPFSAE 341
RLPF E
Sbjct: 209 -RLPFDDE 215
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 33/188 (17%)
Query: 140 VKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCD 199
+ I M K+ +S +E+ L +M+H NI++Y + + S+ +++ Y E G L
Sbjct: 57 INISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSL----YIVMDYCEGGDLFK 112
Query: 200 FL---KCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSD 256
+ K + +Q+ + + L H+H+ + HRD KS N+ L D
Sbjct: 113 RINAQKGVLFQEDQILDWFVQICLALKHVHDR-----------KILHRDIKSQNIFLTKD 161
Query: 257 LTAAIADFGLALLF----EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYA 312
T + DFG+A + E + C +GT Y++PE+ E ++ D++A
Sbjct: 162 GTVQLGDFGIARVLNSTVELARAC------IGTPYYLSPEICENKPYNNKS-----DIWA 210
Query: 313 CALVLWEL 320
VL+EL
Sbjct: 211 LGCVLYEL 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 54/258 (20%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSE--QEIFK----LPHMEHD 166
+L++ +G F V A+ + VAV+I DK S Q++F+ + + H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVRII---DKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 167 NILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIAL-SMSKGLM 223
NI++ E I TE +L+ Y G + D+L + E+ R + +
Sbjct: 74 NIVKLF------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV 283
+ H++ + HRD K+ N+LL +D+ IADFG + F G DT
Sbjct: 128 YCHQKF-----------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DTF--C 173
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVG 343
G+ Y APE+ +G + +D+++ ++L+ L S LPF
Sbjct: 174 GSPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS-----------LPF----- 213
Query: 344 DHPSLEDMQEAVVHKKLR 361
D +L++++E V+ K R
Sbjct: 214 DGQNLKELRERVLRGKYR 231
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 27/204 (13%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
QG G V+ A V I M +Q + E EI + ++ NI+ Y+ +
Sbjct: 30 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ Y GSL D + + Q+ + + L LH
Sbjct: 90 GD----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN--------- 136
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGA 297
V HR+ KS+N+LL D + + DFG P + T VGT +MAPEV+
Sbjct: 137 --QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVV--- 189
Query: 298 INFSRDAFL-RIDMYACALVLWEL 320
+R A+ ++D+++ ++ E+
Sbjct: 190 ---TRKAYGPKVDIWSLGIMAIEM 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 70 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 122 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 175 PELLK------RREFHAEPVDVWSCGIVL 197
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 102/248 (41%), Gaps = 39/248 (15%)
Query: 100 HPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKA--KFKNENVAVKIF----LMQDKQSWQS 153
+P S + + Q+V+ +G FG V A + VA+KI L + +
Sbjct: 2 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 61
Query: 154 EQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCR 213
E+EI L + H +I++ K + I ++ + L D++ EQ R
Sbjct: 62 EREISYLRLLRHPHIIKLYDVIKSKDEI-----IMVIEYAGNELFDYIVQRDKMSEQEAR 116
Query: 214 IALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPG 273
++I+ ++ + HRD K N+LL L IADFGL+ + G
Sbjct: 117 ----------RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 166
Query: 274 KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+ G+ Y APEV+ G + A +D+++C ++L+ + R
Sbjct: 167 NFLKTS---CGSPNYAAPEVISGKLY----AGPEVDVWSCGVILYVMLCR---------- 209
Query: 334 YRLPFSAE 341
RLPF E
Sbjct: 210 -RLPFDDE 216
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 71 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 122
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 123 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 176 PELLK------RREFHAEPVDVWSCGIVL 198
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 116/263 (44%), Gaps = 41/263 (15%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQS----EQEIFKLPHMEHDNI 168
++V+ G V+ A+ N VA+K + ++ ++ E+E+ + H NI
Sbjct: 14 KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI-VTWEQLCRIALSMSKGLMHLHE 227
+ I ++ + ++L+ Y E +L ++++ + ++ + + G+ H H+
Sbjct: 74 VSMIDVDEEDDC----YYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD 129
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
+ HRD K N+L+ S+ T I DFG+A H +GT +
Sbjct: 130 -----------MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNH-VLGTVQ 177
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
Y +PE +G + D D+Y+ +VL+E+ V P PF+ E +
Sbjct: 178 YFSPEQAKGE---ATDECT--DIYSIGIVLYEML-----VGEP------PFNGETAVSIA 221
Query: 348 LEDMQEAV--VHKKLRPTLPETW 368
++ +Q++V V +R +P++
Sbjct: 222 IKHIQDSVPNVTTDVRKDIPQSL 244
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 20/148 (13%)
Query: 185 FWLITAYHERGSLCDFLKCNIVTWEQLCR-IALSMSKGLMHLHEEILPNKADSYKPAVAH 243
+L+ +G L D+L + E+ R I S+ + + LH + H
Sbjct: 175 MFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN-----------NIVH 223
Query: 244 RDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRD 303
RD K N+LL ++ ++DFG + EPG+ + G G Y+APE+L+ +++ +
Sbjct: 224 RDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPG---YLAPEILKCSMDETHP 280
Query: 304 AFLR-IDMYACALVLWELASRCSSVSPP 330
+ + +D++AC ++L+ L + SPP
Sbjct: 281 GYGKEVDLWACGVILFTLLAG----SPP 304
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 52/257 (20%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQ--SEQEIFK----LPHMEHD 166
+L++ +G F V A+ VA+KI DK S Q++F+ + + H
Sbjct: 18 RLLKTIGKGNFAKVKLARHILTGREVAIKII---DKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 167 NILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMH 224
NI++ E I TE +LI Y G + D+L + E+ R
Sbjct: 75 NIVKLF------EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-------- 120
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
+I+ ++ + HRD K+ N+LL +D+ IADFG + F G G G
Sbjct: 121 --RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDAFCG 175
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGD 344
Y APE+ +G + +D+++ ++L+ L S LPF D
Sbjct: 176 APPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS-----------LPF-----D 215
Query: 345 HPSLEDMQEAVVHKKLR 361
+L++++E V+ K R
Sbjct: 216 GQNLKELRERVLRGKYR 232
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
+G G V A ++ V + M ++ + E E+ + +H+N++ +
Sbjct: 160 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV 219
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ + E G+L D + + EQ+ + L++ + L LH +
Sbjct: 220 GD----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--------- 266
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
V HRD KS+++LL D ++DFG + K VGT +MAPE++
Sbjct: 267 --GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELI 319
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 110/257 (42%), Gaps = 52/257 (20%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQ--SEQEIFK----LPHMEHD 166
+L++ +G F V A+ VA+KI DK S Q++F+ + + H
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTGREVAIKII---DKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 167 NILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMH 224
NI++ E I TE +LI Y G + D+L + E+ R
Sbjct: 72 NIVKLF------EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-------- 117
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
+I+ ++ + HRD K+ N+LL +D+ IADFG + F G G G
Sbjct: 118 --RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG---GKLDTFCG 172
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGD 344
+ Y APE+ +G + +D+++ ++L+ L S LPF D
Sbjct: 173 SPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS-----------LPF-----D 212
Query: 345 HPSLEDMQEAVVHKKLR 361
+L++++E V+ K R
Sbjct: 213 GQNLKELRERVLRGKYR 229
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 36/243 (14%)
Query: 94 VPTLEPHPTSPPSPQQGC---RSIQLVEVKAQGRFGAVWKAKFKNEN------VAVKIF- 143
V L P T+P Q ++ V+V G FG V+K + E VA+KI
Sbjct: 17 VEPLTPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN 76
Query: 144 -LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL- 201
K + + E + M+H +++R +G + L+T G L +++
Sbjct: 77 ETTGPKANVEFMDEALIMASMDHPHLVRLLGV-----CLSPTIQLVTQLMPHGCLLEYVH 131
Query: 202 --KCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA 259
K NI + + L + ++KG+M+L E L HRD + NVL+KS
Sbjct: 132 EHKDNIGS-QLLLNWCVQIAKGMMYLEERRL-----------VHRDLAARNVLVKSPNHV 179
Query: 260 AIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
I DFGLA L E + + G ++MA E + R + D+++ + +WE
Sbjct: 180 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH-----YRKFTHQSDVWSYGVTIWE 234
Query: 320 LAS 322
L +
Sbjct: 235 LMT 237
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 78
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++I + G+L D+L+ CN V+ L +A +S + +L
Sbjct: 79 -EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE----------- 126
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT G + ++ APE
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTXTAHAGAKFPIKWTAPES 181
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 182 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 213
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 70 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 122 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 175 PELLK------RREFHAEPVDVWSCGIVL 197
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
+G G V A ++ V + M ++ + E E+ + +H+N++ +
Sbjct: 38 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV 97
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ + E G+L D + + EQ+ + L++ + L LH +
Sbjct: 98 GD----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--------- 144
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
V HRD KS+++LL D ++DFG + K VGT +MAPE++
Sbjct: 145 --GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELI 197
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 71 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 122
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 123 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 176 PELLK------RREFHAEPVDVWSCGIVL 198
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 71 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 122
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 123 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 176 PELLK------RREFHAEPVDVWSCGIVL 198
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 71 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 122
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 123 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 176 PELLK------RREFHAEPVDVWSCGIVL 198
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
+G G V A ++ V + M ++ + E E+ + +H+N++ +
Sbjct: 40 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV 99
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ + E G+L D + + EQ+ + L++ + L LH +
Sbjct: 100 GD----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--------- 146
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
V HRD KS+++LL D ++DFG + K VGT +MAPE++
Sbjct: 147 --GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELI 199
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 70 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 122 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 175 PELLK------RREFHAEPVDVWSCGIVL 197
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 52/257 (20%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSE--QEIFK----LPHMEHD 166
+L++ +G F V A+ + VAVKI DK S Q++F+ + + H
Sbjct: 10 RLLKTIGKGNFAKVKLARHILTGKEVAVKII---DKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 167 NILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMH 224
NI++ E I TE +L+ Y G + D+L + E+ R
Sbjct: 67 NIVKLF------EVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF-------- 112
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
+I+ ++ + HRD K+ N+LL +D+ IADFG + F G DT G
Sbjct: 113 --RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL-DTF--CG 167
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGD 344
+ Y APE+ +G + +D+++ ++L+ L S LPF D
Sbjct: 168 SPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS-----------LPF-----D 207
Query: 345 HPSLEDMQEAVVHKKLR 361
+L++++E V+ K R
Sbjct: 208 GQNLKELRERVLRGKYR 224
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 115 QLVEVKAQGRFGAVWKA--KFKNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNI 168
Q+V+ +G FG V A + VA+KI L + + E+EI L + H +I
Sbjct: 7 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 66
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEE 228
++ K + I ++ + L D++ EQ R ++
Sbjct: 67 IKLYDVIKSKDEI-----IMVIEYAGNELFDYIVQRDKMSEQEAR----------RFFQQ 111
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
I+ ++ + HRD K N+LL L IADFGL+ + G + G+ Y
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNY 168
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAE 341
APEV+ G + A +D+++C ++L+ + R RLPF E
Sbjct: 169 AAPEVISGKLY----AGPEVDVWSCGVILYVMLCR-----------RLPFDDE 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 70 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 122 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVA 174
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 175 PELLK------RREFHAEPVDVWSCGIVL 197
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 38/220 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYIGAEKRGES 180
G++G V++ +K ++ V + +++ E +E + ++H N+++ +G R
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--- 81
Query: 181 IHTEFWLITAYHERGSLCDFLK-CNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
F++I + G+L D+L+ CN V L +A +S + +L
Sbjct: 82 -EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----------- 129
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-GQVGTR---RYMAPEV 293
K HRD + N L+ + +ADFGL+ L GDT G + ++ APE
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-----TGDTXTAHAGAKFPIKWTAPES 184
Query: 294 LEGAIN-FSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L A N FS ++ D++A ++LWE+A+ +SP PG
Sbjct: 185 L--AYNKFS----IKSDVWAFGVLLWEIATY--GMSPYPG 216
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 54/258 (20%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSE--QEIFK----LPHMEHD 166
+L++ +G F V A+ + VAV+I DK S Q++F+ + + H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVRII---DKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 167 NILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIAL-SMSKGLM 223
NI++ E I TE +L+ Y G + D+L + E+ R + +
Sbjct: 74 NIVKLF------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV 283
+ H++ + HRD K+ N+LL +D+ IADFG + F G +
Sbjct: 128 YCHQKF-----------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEF---C 173
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVG 343
G+ Y APE+ +G + +D+++ ++L+ L S LPF
Sbjct: 174 GSPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS-----------LPF----- 213
Query: 344 DHPSLEDMQEAVVHKKLR 361
D +L++++E V+ K R
Sbjct: 214 DGQNLKELRERVLRGKYR 231
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 39/233 (16%)
Query: 115 QLVEVKAQGRFGAVWKA--KFKNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNI 168
Q+V+ +G FG V A + VA+KI L + + E+EI L + H +I
Sbjct: 11 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI 70
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEE 228
++ K + I ++ + L D++ EQ R ++
Sbjct: 71 IKLYDVIKSKDEI-----IMVIEYAGNELFDYIVQRDKMSEQEAR----------RFFQQ 115
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
I+ ++ + HRD K N+LL L IADFGL+ + G + G+ Y
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNY 172
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAE 341
APEV+ G + A +D+++C ++L+ + R RLPF E
Sbjct: 173 AAPEVISGKLY----AGPEVDVWSCGVILYVMLCR-----------RLPFDDE 210
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
+G G V A ++ V + M ++ + E E+ + +H+N++ +
Sbjct: 29 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV 88
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ + E G+L D + + EQ+ + L++ + L LH +
Sbjct: 89 GD----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--------- 135
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
V HRD KS+++LL D ++DFG + K VGT +MAPE++
Sbjct: 136 --GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELI 188
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 68
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 69 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 120
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 121 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 173
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 174 PELLK------RREFHAEPVDVWSCGIVL 196
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 70 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 122 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 175 PELLK------RREFHAEPVDVWSCGIVL 197
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 33/256 (12%)
Query: 79 YWYYRQRKLGSYFNPVPTLEPH-PTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFK--- 134
Y++++ +Y +P +P+ + + I++ V G FG V + K
Sbjct: 9 YFHFKFPGTKTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPG 68
Query: 135 NENVAVKIFLMQ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITA 190
+VAV I ++ +KQ E + +H N++ G RG+ + ++
Sbjct: 69 KRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPV----MIVIE 124
Query: 191 YHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKS 248
+ E G+L FL+ + T QL + ++ G+ +L + HRD +
Sbjct: 125 FMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADM-----------GYVHRDLAA 173
Query: 249 NNVLLKSDLTAAIADFGLALLFE--PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFL 306
N+L+ S+L ++DFGL+ + E P T G++ R+ APE ++ R
Sbjct: 174 RNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPV-RWTAPEAIQ-----YRKFTS 227
Query: 307 RIDMYACALVLWELAS 322
D+++ +V+WE+ S
Sbjct: 228 ASDVWSYGIVMWEVMS 243
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
+G G V A ++ V + M ++ + E E+ + +H+N++ +
Sbjct: 33 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV 92
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ + E G+L D + + EQ+ + L++ + L LH +
Sbjct: 93 GD----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--------- 139
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
V HRD KS+++LL D ++DFG + K VGT +MAPE++
Sbjct: 140 --GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELI 192
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 71 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 122
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 123 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 176 PELLK------RREFHAEPVDVWSCGIVL 198
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 70 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 122 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 175 PELLK------RREFHAEPVDVWSCGIVL 197
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 70 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 122 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 175 PELLK------RREFHAEPVDVWSCGIVL 197
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 70 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 122 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 175 PELLK------RREFHAEPVDVWSCGIVL 197
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 49/297 (16%)
Query: 121 AQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQSE-------QEIFKLPHMEHDNILRY 171
G +G+V A K E VA+K + +QSE +E+ L HM+H+N++
Sbjct: 33 GSGAYGSVCSAIDKRSGEKVAIKKL----SRPFQSEIFAKRAYRELLLLKHMQHENVIGL 88
Query: 172 IGAEKRGESIHT--EFWLITAYHERGSLCDFLKCNIVTW--EQLCRIALSMSKGLMHLHE 227
+ S+ +F+L+ + + D K + + E++ + M KGL ++H
Sbjct: 89 LDVFTPASSLRNFYDFYLVMPFMQ----TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS 144
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
V HRD K N+ + D I DFGLA + G V TR
Sbjct: 145 -----------AGVVHRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYVVTRW 188
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
Y APEV+ +++++ +D+++ ++ E+ + + +L +V P
Sbjct: 189 YRAPEVILSWMHYNQ----TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 244
Query: 348 LEDMQEA--VVHKKLRPTLPETWKQHAGML------ALCDTMEECWDHDAEARLSAS 396
E +Q+ K +LP+T ++ L D +E+ + D + RL+A+
Sbjct: 245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 301
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 70 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 122 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 175 PELLK------RREFHAEPVDVWSCGIVL 197
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 70
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 71 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 122
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 123 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 176 PELLK------RREFHAEPVDVWSCGIVL 198
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 20/177 (11%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAEKR 177
+G G V A ++ V + M ++ + E E+ + +H+N++ +
Sbjct: 83 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV 142
Query: 178 GESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSY 237
G+ E W++ + E G+L D + + EQ+ + L++ + L LH +
Sbjct: 143 GD----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ--------- 189
Query: 238 KPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
V HRD KS+++LL D ++DFG + K VGT +MAPE++
Sbjct: 190 --GVIHRDIKSDSILLTHDGRVKLSDFGFCA--QVSKEVPRRKXLVGTPYWMAPELI 242
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ A+++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNAMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G +G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKF 70
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 71 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 122
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 123 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 175
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 176 PELLK------RREFHAEPVDVWSCGIVL 198
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 39/225 (17%)
Query: 117 VEVKAQGRFGAVWKAKFK--NENVAVKIFLMQDKQSW---QSEQEIFKLPHMEHDNILRY 171
+E +G +G V+KAK + +E VA+K + D + +EI L ++H NI+R
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCD------FLKCN-IVTWEQLCRIALSMSKGLMH 224
+ +H++ L + CD F CN + E + + KGL
Sbjct: 67 ------HDVLHSDKKLTLVFE----FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
H V HRD K N+L+ + +ADFGLA F G P +V
Sbjct: 117 CHSR-----------NVLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVV 163
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSP 329
T Y P+VL GA +S IDM++ + ELA+ + P
Sbjct: 164 TLWYRPPDVLFGAKLYSTS----IDMWSAGCIFAELANAARPLFP 204
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 102/239 (42%), Gaps = 43/239 (17%)
Query: 96 TLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNEN------VAVKIFL--MQD 147
T E HP+ C + Q +V G FG V+K K + VA+K +
Sbjct: 38 TTEIHPS--------CVTRQ--KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE 87
Query: 148 KQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL--KCNI 205
KQ E + H NI+R G + + +IT Y E G+L FL K
Sbjct: 88 KQRVDFLGEAGIMGQFSHHNIIRLEGVISK----YKPMMIITEYMENGALDKFLREKDGE 143
Query: 206 VTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
+ QL + ++ G+ +L HRD + N+L+ S+L ++DFG
Sbjct: 144 FSVLQLVGMLRGIAAGMKYLANM-----------NYVHRDLAARNILVNSNLVCKVSDFG 192
Query: 266 LALLFE--PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
L+ + E P + G++ R+ APE AI++ R D+++ +V+WE+ +
Sbjct: 193 LSRVLEDDPEATYTTSGGKIPI-RWTAPE----AISY-RKFTSASDVWSFGIVMWEVMT 245
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 49/297 (16%)
Query: 121 AQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQSE-------QEIFKLPHMEHDNILRY 171
G +G+V A K E VA+K + +QSE +E+ L HM+H+N++
Sbjct: 51 GSGAYGSVCSAIDKRSGEKVAIKKL----SRPFQSEIFAKRAYRELLLLKHMQHENVIGL 106
Query: 172 IGAEKRGESIHT--EFWLITAYHERGSLCDFLKCNIVTW--EQLCRIALSMSKGLMHLHE 227
+ S+ +F+L+ + + D K + + E++ + M KGL ++H
Sbjct: 107 LDVFTPASSLRNFYDFYLVMPFMQ----TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS 162
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
V HRD K N+ + D I DFGLA + G V TR
Sbjct: 163 -----------AGVVHRDLKPGNLAVNEDCELKILDFGLA-----RHADAEMTGYVVTRW 206
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
Y APEV+ +++++ +D+++ ++ E+ + + +L +V P
Sbjct: 207 YRAPEVILSWMHYNQ----TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 262
Query: 348 LEDMQEA--VVHKKLRPTLPETWKQHAGML------ALCDTMEECWDHDAEARLSAS 396
E +Q+ K +LP+T ++ L D +E+ + D + RL+A+
Sbjct: 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 319
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 104/227 (45%), Gaps = 42/227 (18%)
Query: 105 PSPQQGCRSIQLVEVKAQGRFGAV---WKAKFKNENVAVKIF------LMQDKQSWQSEQ 155
P QG R + G +G+V + A+ + + VAVK L+ +++++
Sbjct: 27 PQRLQGLRPV------GSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYR--- 76
Query: 156 EIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCR 213
E+ L H++H+N++ + SI +E +L+T L + +K ++ E +
Sbjct: 77 ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQF 135
Query: 214 IALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPG 273
+ + +GL ++H + HRD K +NV + D I DFGLA
Sbjct: 136 LVYQLLRGLKYIH-----------SAGIIHRDLKPSNVAVNEDSELRILDFGLA-----R 179
Query: 274 KPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
+ + G V TR Y APE++ +++++ +D+++ ++ EL
Sbjct: 180 QADEEMTGYVATRWYRAPEIMLNWMHYNQT----VDIWSVGCIMAEL 222
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 110/258 (42%), Gaps = 54/258 (20%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSE--QEIFK----LPHMEHD 166
+L++ +G F V A+ + VAVKI DK S Q++F+ + + H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKII---DKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 167 NILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIAL-SMSKGLM 223
NI++ E I TE +L+ Y G + D+L + E+ R + +
Sbjct: 74 NIVKLF------EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ 127
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV 283
+ H++ + HRD K+ N+LL +D+ IADFG + F G
Sbjct: 128 YCHQKF-----------IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DAFC 173
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVG 343
G Y APE+ +G + +D+++ ++L+ L S LPF
Sbjct: 174 GAPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS-----------LPF----- 213
Query: 344 DHPSLEDMQEAVVHKKLR 361
D +L++++E V+ K R
Sbjct: 214 DGQNLKELRERVLRGKYR 231
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 37/243 (15%)
Query: 97 LEPHPTSPPS-------PQQGCRSIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ 146
++PH P+ + +I + +V G FG V + K + ++V I ++
Sbjct: 23 VDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 147 ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK 202
+KQ E + +H NI+R G + + + ++T E GSL FL+
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----IVTEXMENGSLDSFLR 138
Query: 203 CNIVTWE--QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA 260
+ + QL + ++ G+ +L + HRD + N+L+ S+L
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDM-----------GAVHRDLAARNILINSNLVCK 187
Query: 261 IADFGLALLFEPGKPCG-DTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
++DFGL+ + E T G R+ +PE AI + R D+++ +VLWE
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWE 242
Query: 320 LAS 322
+ S
Sbjct: 243 VMS 245
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 49/287 (17%)
Query: 111 CRSIQLVEVKAQGRFGAVWKA--KFKNENVAVK-IF--LMQDKQSWQSEQEIFKLPHME- 164
R +LV+ +G +G VWK+ + E VAVK IF + ++ +EI L +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMH 224
H+NI+ + + + +L+ Y E L ++ NI+ + + K + +
Sbjct: 68 HENIVNLLNVLRADND--RDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKY 124
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF-------------- 270
LH + HRD K +N+LL ++ +ADFGL+ F
Sbjct: 125 LHS-----------GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSI 173
Query: 271 -EPGKPCGDTH----GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
E + D V TR Y APE+L G+ +++ IDM++ +L E+ C
Sbjct: 174 NENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKG----IDMWSLGCILGEIL--CG 227
Query: 326 SVSPPPGEYRLPFSAEVG--DHPSLEDMQEAVVHKKLRPTLPETWKQ 370
P +G D PS ED++ + T+ E+ K+
Sbjct: 228 KPIFPGSSTMNQLERIIGVIDFPSNEDVES--IQSPFAKTMIESLKE 272
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 37/243 (15%)
Query: 97 LEPHPTSPPS-------PQQGCRSIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ 146
++PH P+ + +I + +V G FG V + K + ++V I ++
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 147 ----DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK 202
+KQ E + +H NI+R G + + + ++T E GSL FL+
Sbjct: 83 VGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM----IVTEXMENGSLDSFLR 138
Query: 203 CNIVTWE--QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA 260
+ + QL + ++ G+ +L + HRD + N+L+ S+L
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSDM-----------GYVHRDLAARNILINSNLVCK 187
Query: 261 IADFGLALLFEPGKPCG-DTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
++DFGL+ + E T G R+ +PE AI + R D+++ +VLWE
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWE 242
Query: 320 LAS 322
+ S
Sbjct: 243 VMS 245
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 95/239 (39%), Gaps = 28/239 (11%)
Query: 93 PVPTLEPHPTSPPSPQQGCRSIQLVEVK-AQGRFGAVWKAKFKNENV-----AVKIF-LM 145
PVP +P P + +E K +G+F V++A + V V+IF LM
Sbjct: 12 PVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLM 71
Query: 146 QDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI 205
K +EI L + H N+++Y + ++ L A + F K
Sbjct: 72 DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKR 131
Query: 206 VTWEQLC-RIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADF 264
+ E+ + + + L H+H V HRD K NV + + + D
Sbjct: 132 LIPERTVWKYFVQLCSALEHMHSR-----------RVMHRDIKPANVFITATGVVKLGDL 180
Query: 265 GLALLFEPGKPCGDTHGQVGTRRYMAPE-VLEGAINFSRDAFLRIDMYACALVLWELAS 322
GL F H VGT YM+PE + E NF + D+++ +L+E+A+
Sbjct: 181 GLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNF------KSDIWSLGCLLYEMAA 231
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 30/220 (13%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFK---NENVAVKIFLMQ----DKQSWQSEQEIFKLPHMEH 165
+I + +V G FG V + K + ++V I ++ +KQ E + +H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 166 DNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV--TWEQLCRIALSMSKGLM 223
NI+R G + + + ++T E GSL FL+ + T QL + ++ G+
Sbjct: 77 PNIIRLEGVVTKSKPVM----IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPG-KPCGDTHGQ 282
+L + HRD + N+L+ S+L ++DFGL+ + E + T G
Sbjct: 133 YLSDM-----------GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 283 VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
R+ +PE AI + R D+++ +VLWE+ S
Sbjct: 182 KIPIRWTSPE----AIAY-RKFTSASDVWSYGIVLWEVMS 216
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 30/234 (12%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK--NENVAVKIFLMQDKQSWQSEQEIFK-----LPHME 164
R ++ + +G FG+V ++ +N + + Q + S +Q F+ L +
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 66
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGL 222
D I++Y G E L+ Y G L DFL+ + + +L + + KG+
Sbjct: 67 SDFIVKYRGVSY--GPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 124
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-- 280
+L HRD + N+L++S+ IADFGLA L K
Sbjct: 125 EYLGSR-----------RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREP 173
Query: 281 GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
GQ Y APE L I FSR + D+++ +VL+EL + C P E+
Sbjct: 174 GQSPIFWY-APESLSDNI-FSRQS----DVWSFGVVLYELFTYCDKSCSPSAEF 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 114/258 (44%), Gaps = 56/258 (21%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQL 211
Q E EI L ++H NI++ + E H +++ E G L + IV+ +
Sbjct: 66 QIEAEIEVLKSLDHPNIIKIF---EVFEDYHN-MYIVMETCEGGELLE----RIVSAQAR 117
Query: 212 CRIALSMSKGLM-HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLA 267
+ ++S+G + L ++++ A + V H+D K N+L + + I DFGLA
Sbjct: 118 GK---ALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Query: 268 LLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSV 327
LF+ + + GT YMAPEV F RD + D+++ +V++ L + C
Sbjct: 175 ELFKSDEHSTNA---AGTALYMAPEV------FKRDVTFKCDIWSAGVVMYFLLTGC--- 222
Query: 328 SPPPGEYRLPFSAEVGDHPSLEDMQEAVVHK------KLRPTLPETWKQHAGMLALCDTM 381
LPF+ SLE++Q+ +K + RP P+ D +
Sbjct: 223 --------LPFTG-----TSLEEVQQKATYKEPNYAVECRPLTPQA----------VDLL 259
Query: 382 EECWDHDAEARLSASCVV 399
++ D E R SA+ V+
Sbjct: 260 KQMLTKDPERRPSAAQVL 277
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN------VAVKIF--LMQDKQSWQSEQEIFKLPHMEH 165
++ V+V G FG V+K + E VA+KI K + + E + M+H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 166 DNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGL 222
+++R +G + L+T G L +++ K NI + + L + ++KG+
Sbjct: 77 PHLVRLLGV-----CLSPTIQLVTQLMPHGCLLEYVHEHKDNIGS-QLLLNWCVQIAKGM 130
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ 282
M+L E L HRD + NVL+KS I DFGLA L E + + G
Sbjct: 131 MYLEERRL-----------VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 179
Query: 283 VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++MA E + R + D+++ + +WEL +
Sbjct: 180 KMPIKWMALECIH-----YRKFTHQSDVWSYGVTIWELMT 214
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 42/230 (18%)
Query: 117 VEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+ V QG FG V KA+ + A+K +++ E+ L + H ++RY A
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 175 --EKR-------GESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLM 223
E+R + ++ Y E G+L D + + + + R+ + + L
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA---------LLFE--- 271
++H + + HRD K N+ + I DFGLA L +
Sbjct: 131 YIHSQ-----------GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 272 -PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
PG T +GT Y+A EVL+G +++ +IDMY+ ++ +E+
Sbjct: 180 LPGSSDNLTSA-IGTAMYVATEVLDGTGHYNE----KIDMYSLGIIFFEM 224
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 43/233 (18%)
Query: 106 SPQQGC--RSIQLVEVKAQGRFGAVWKAKFKNE-----NVAVKIF----LMQDKQSWQSE 154
SPQ G + L + +G FG V++ + N NVAVK + +K+ + SE
Sbjct: 16 SPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSE 75
Query: 155 QEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI 214
I K +++H +I++ IG + + W+I + G L +L+ N + + L +
Sbjct: 76 AVIMK--NLDHPHIVKLIGIIEEEPT-----WIIMELYPYGELGHYLERNKNSLKVLTLV 128
Query: 215 ALSMSKGLMHLHEEILPNKADSYKPAV--AHRDFKSNNVLLKSDLTAAIADFGLALLFEP 272
S+ KA +Y ++ HRD N+L+ S + DFGL+ E
Sbjct: 129 LYSLQIC-----------KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 177
Query: 273 GKPCGDTHGQVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
D + TR ++M+PE +INF R D++ A+ +WE+ S
Sbjct: 178 ----EDYYKASVTRLPIKWMSPE----SINFRRFTTAS-DVWMFAVCMWEILS 221
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 114/271 (42%), Gaps = 67/271 (24%)
Query: 117 VEVKAQGRFGAVWKAKFKNE--NVAVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYI 172
++ +G FG V++AK K + N A+K + +++ + + +E+ L +EH I+RY
Sbjct: 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 70
Query: 173 GA------EKRGESIHTEFWL------------------------ITAYHERGSLCDFL- 201
A EK E + E WL + + + ++
Sbjct: 71 NAWLETPPEKWQEEM-DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129
Query: 202 ---KCNIVTWEQLCR---IALSMSK---------GL-MHLHEEILPNKADSYKPAVAHRD 245
K + QLCR + M++ G+ +H+ +I + + HRD
Sbjct: 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRD 189
Query: 246 FKSNNVLLKSDLTAAIADFGLALLFEPGK---------PCGDTH-GQVGTRRYMAPEVLE 295
K +N+ D + DFGL + + P TH GQVGT+ YM+PE +
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIH 249
Query: 296 GAINFSRDAFLRIDMYACALVLWELASRCSS 326
G N+S ++D+++ L+L+EL S+
Sbjct: 250 GN-NYSH----KVDIFSLGLILFELLYSFST 275
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 32 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 89
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 142
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 143 -----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 198 IMLNSKGYTKS----IDIWSVGCILAEMLS 223
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 115 QLVEVKAQGRFGAVW--KAKFKNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNI 168
Q V+ G +G V K K A+KI + S E+ L ++H NI
Sbjct: 24 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 83
Query: 169 LRY--IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLH 226
++ +KR ++L+ + G L D I+ ++ + ++ +
Sbjct: 84 MKLYEFFEDKRN------YYLVMEVYRGGELFD----EIILRQKFSEVDAAV------IM 127
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGLALLFEPGKPCGDTHGQV 283
+++L +K + HRD K N+LL+S D I DFGL+ FE G G ++
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKERL 184
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
GT Y+APEVL + + D+++C ++L+ L
Sbjct: 185 GTAYYIAPEVLRKKYD------EKCDVWSCGVILYIL 215
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 32 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 89
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 142
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 143 -----ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 198 IMLNSKGYTKS----IDIWSVGCILAEMLS 223
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 36/223 (16%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN-----VAVKI----FLMQDKQSWQSEQEIFKLPHME 164
+++ +V G FG V K VA+K + + ++ + SE I + +
Sbjct: 35 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI--MGQFD 92
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGL 222
H N++ G + T +IT + E GSL FL+ N T QL + ++ G+
Sbjct: 93 HPNVIHLEGVVTKS----TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGM 148
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ 282
+L + HRD + N+L+ S+L ++DFGL+ E
Sbjct: 149 KYLADM-----------NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 283 VGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+G + R+ APE ++ R D+++ +V+WE+ S
Sbjct: 198 LGGKIPIRWTAPEAIQ-----YRKFTSASDVWSYGIVMWEVMS 235
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 32 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 89
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 142
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 143 -----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 198 IMLNSKGYTKS----IDIWSVGCILAEMLS 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 36 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 93
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 146
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 147 -----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 202 IMLNSKGYTKS----IDIWSVGCILAEMLS 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 34 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 91
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 92 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 144
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 145 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 200 IMLNSKGYTKS----IDIWSVGCILAEMLS 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 36 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 93
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 146
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 147 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 202 IMLNSKGYTKS----IDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 37 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 94
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 95 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 147
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 148 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 203 IMLNSKGYTKS----IDIWSVGCILAEMLS 228
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 32/211 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSE-------QEIFKLPHMEHDNILRYIG 173
G +GAV A + K+ + + + +QSE +E+ L HM H+N++ +
Sbjct: 34 GSGAYGAVCSAV--DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD 91
Query: 174 AEKRGESI--HTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILP 231
E++ T+F+L+ + L +K + +++ + M KGL ++H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH----- 145
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
+ HRD K N+ + D I DFGLA + + G V TR Y AP
Sbjct: 146 ------AAGIIHRDLKPGNLAVNEDCELKILDFGLA-----RQADSEMXGXVVTRWYRAP 194
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELAS 322
EV+ + +++ +D+++ ++ E+ +
Sbjct: 195 EVILNWMRYTQ----TVDIWSVGCIMAEMIT 221
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 32 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 89
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 142
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 143 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 198 IMLNSKGYTKS----IDIWSVGCILAEMLS 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 131
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 132 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 179
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 180 ----RHTADEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 131
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 132 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 179
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 180 ----RHTADEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 225
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQSE--QEIFKLPHM 163
R ++ + +G FG V ++ E VAVK + + ++ +EI L ++
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80
Query: 164 EHDNILRYIG--AEKRGESIHTEFWLITAYHERGSLCDFL--KCNIVTWEQLCRIALSMS 219
H+NI++Y G E G I LI + GSL ++L N + +Q + A+ +
Sbjct: 81 YHENIVKYKGICTEDGGNGIK----LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 220 KGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT 279
KG+ +L HRD + NVL++S+ I DFGL E K
Sbjct: 137 KGMDYLGSR-----------QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTV 185
Query: 280 HGQVGTRRY-MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
+ + APE L ++ D+++ + L EL + C S S P
Sbjct: 186 KDDRDSPVFWYAPECL-----MQSKFYIASDVWSFGVTLHELLTYCDSDSSP 232
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 116 LVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQS--WQSEQEIFKLPHMEHDNILRY 171
LV+ +G G V A + E VAVKI M+ ++EI + H+N++++
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF 69
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE-QLCRIALSMSKGLMHLHEEIL 230
G + G +I +L Y G L D ++ +I E R + G+++LH
Sbjct: 70 YGHRREG-NIQ---YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---- 121
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ HRD K N+LL I+DFGLA +F + GT Y+A
Sbjct: 122 -------GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA 174
Query: 291 PEVLEGAINFSRDAFLR--IDMYACALVL 317
PE+L+ R F +D+++C +VL
Sbjct: 175 PELLK------RREFHAEPVDVWSCGIVL 197
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 36 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIG-INDI 93
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 146
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 147 -----ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 202 IMLNSKGYTKS----IDIWSVGCILAEMLS 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 40/217 (18%)
Query: 118 EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
+V G FG V++AK E VA+K ++QDK+ E +I + ++H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIMR--KLDHCNIVR----- 77
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIV---TWEQLCRIALSMSKGLMHL------- 225
L ++ G D + N+V E + R+A S+ L
Sbjct: 78 -----------LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126
Query: 226 -HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTHGQV 283
++ + A + + HRD K N+LL D + DFG A G+P +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXI 183
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
+R Y APE++ GA +++ ID+++ VL EL
Sbjct: 184 CSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 216
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 98/232 (42%), Gaps = 33/232 (14%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQSE--QEIFKLPHM 163
R ++ + +G FG V ++ E VAVK + + ++ +EI L ++
Sbjct: 9 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 68
Query: 164 EHDNILRYIG--AEKRGESIHTEFWLITAYHERGSLCDFL--KCNIVTWEQLCRIALSMS 219
H+NI++Y G E G I LI + GSL ++L N + +Q + A+ +
Sbjct: 69 YHENIVKYKGICTEDGGNGIK----LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 124
Query: 220 KGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDT 279
KG+ +L HRD + NVL++S+ I DFGL E K
Sbjct: 125 KGMDYLGSR-----------QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTV 173
Query: 280 HGQVGTRRY-MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
+ + APE L ++ D+++ + L EL + C S S P
Sbjct: 174 KDDRDSPVFWYAPECL-----MQSKFYIASDVWSFGVTLHELLTYCDSDSSP 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 131
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 132 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 179
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 180 ----RHTADEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 52 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 109
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 110 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 163
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 164 ------NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 218 IMLNSKGYTKS----IDIWSVGCILAEMLS 243
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 40 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 97
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 98 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 150
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 151 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 206 IMLNSKGYTKS----IDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 32 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 89
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 142
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 143 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 198 IMLNSKGYTKS----IDIWSVGCILAEMLS 223
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKI----FLMQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V K + E ++KI +++DK QS Q + + ++H +I
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMHLH 226
+R +G G S+ L+T Y GSL D ++ + + + L + ++KG+ +L
Sbjct: 96 VRLLGLCP-GSSLQ----LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 150
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
E + HR+ + NVLLKS +ADFG+A L P
Sbjct: 151 EH-----------GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++MA E +I+F + + D+++ + +WEL +
Sbjct: 200 KWMALE----SIHFGKYTH-QSDVWSYGVTVWELMT 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 37 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 94
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 95 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 147
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 148 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 203 IMLNSKGYTKS----IDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 38 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 95
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 96 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 148
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 149 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 204 IMLNSKGYTKS----IDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 29 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 86
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 87 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 139
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 140 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 195 IMLNSKGYTKS----IDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 36 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 93
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 146
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 147 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 202 IMLNSKGYTKS----IDIWSVGCILAEMLS 227
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K L QDK+ E +I
Sbjct: 43 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIM 101
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 102 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 160 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 207 LVRGEP---NVSXICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 250
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 30 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 87
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 88 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 140
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 141 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 196 IMLNSKGYTKS----IDIWSVGCILAEMLS 221
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 30 GEGAYGMVCSA-YDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 87
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 88 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 140
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 141 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 196 IMLNSKGYTKS----IDIWSVGCILAEMLS 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 96 RTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 153
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 154 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 201
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ ++++ + +D+++ ++ EL +
Sbjct: 202 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYN----MTVDIWSVGCIMAELLT 247
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 29/215 (13%)
Query: 117 VEVKAQGRFGAVWKAKFKNENV--AVKIFLMQDKQSWQSE--QEIFKLPHMEHDNILRYI 172
+E G + V+K K V A+K + ++ S +EI + ++H+NI+R
Sbjct: 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLY 69
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGL-----MHLHE 227
+ IHTE L + +F+ ++ + R + +GL +
Sbjct: 70 ------DVIHTENKLTLVF-------EFMDNDLKKYMD-SRTVGNTPRGLELNLVKYFQW 115
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
++L A ++ + HRD K N+L+ + DFGLA F G P +V T
Sbjct: 116 QLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVTLW 173
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
Y AP+VL G+ +S ID+++C +L E+ +
Sbjct: 174 YRAPDVLMGSRTYSTS----IDIWSCGCILAEMIT 204
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K L QDK+ E +I
Sbjct: 45 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIM 103
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 104 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 161
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 162 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 208
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 209 LVRGEP---NVSYICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 252
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKI----FLMQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V K + E ++KI +++DK QS Q + + ++H +I
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMHLH 226
+R +G G S+ L+T Y GSL D ++ + + + L + ++KG+ +L
Sbjct: 78 VRLLGLCP-GSSLQ----LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 132
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
E + HR+ + NVLLKS +ADFG+A L P
Sbjct: 133 EH-----------GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++MA E +I+F + + D+++ + +WEL +
Sbjct: 182 KWMALE----SIHFGKYTH-QSDVWSYGVTVWELMT 212
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 86/212 (40%), Gaps = 32/212 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFK-----LPHMEHDNILRYIGAE 175
+G F V+K V V +QD++ +SE++ FK L ++H NI+R+ +
Sbjct: 35 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSW 94
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLK----CNIVTWEQLCRIALSMSKGLMHLHEEILP 231
+ L+T G+L +LK I CR L KGL LH
Sbjct: 95 ESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL---KGLQFLH----- 146
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDL-TAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ P + HRD K +N+ + + I D GLA L K +GT + A
Sbjct: 147 ----TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXA 198
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
PE E + S +D+YA E A+
Sbjct: 199 PEXYEEKYDES------VDVYAFGXCXLEXAT 224
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 36/217 (16%)
Query: 115 QLVEVKAQGRFGAVW--KAKFKNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNI 168
Q V+ G +G V K K A+KI + S E+ L ++H NI
Sbjct: 7 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 66
Query: 169 LRY--IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLH 226
++ +KR ++L+ + G L D I+ ++ + ++ +
Sbjct: 67 MKLYEFFEDKRN------YYLVMEVYRGGELFD----EIILRQKFSEVDAAV------IM 110
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGLALLFEPGKPCGDTHGQV 283
+++L +K + HRD K N+LL+S D I DFGL+ FE G G ++
Sbjct: 111 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKERL 167
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
GT Y+APEVL + + D+++C ++L+ L
Sbjct: 168 GTAYYIAPEVLRKKYD------EKCDVWSCGVILYIL 198
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQSW--QSEQEIFKLPHMEH 165
G R QL + +G +G V A + VA+K + Q++ ++ +EI L H
Sbjct: 42 GPRYTQLQYI-GEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRH 100
Query: 166 DNIL--RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLM 223
+N++ R I E++ + +++ E L LK ++ + +C + +GL
Sbjct: 101 ENVIGIRDILRASTLEAMR-DVYIVQDLME-TDLYKLLKSQQLSNDHICYFLYQILRGLK 158
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQ 282
++H V HRD K +N+L+ + I DFGLA + +P G
Sbjct: 159 YIH-----------SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 283 VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
V TR Y APE++ + +++ ID+++ +L E+ S
Sbjct: 208 VATRWYRAPEIMLNSKGYTKS----IDIWSVGCILAEMLS 243
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K ++QDK+ E +I
Sbjct: 47 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIM 105
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 106 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 163
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 164 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 210
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 211 LVRGEP---NVSYICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 254
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 54/258 (20%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSE--QEIFK----LPHMEHD 166
+L++ +G F V A+ + VAVKI DK S Q++F+ + H
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKII---DKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 167 NILRYIGAEKRGESIHTE--FWLITAYHERGSLCDFLKCNIVTWEQLCRIAL-SMSKGLM 223
NI++ E I TE +L+ Y G + D+L + E+ R + +
Sbjct: 74 NIVKLF------EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ 127
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV 283
+ H++ + HRD K+ N+LL +D IADFG + F G
Sbjct: 128 YCHQKF-----------IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKL---DAFC 173
Query: 284 GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVG 343
G Y APE+ +G + +D+++ ++L+ L S LPF
Sbjct: 174 GAPPYAAPELFQG----KKYDGPEVDVWSLGVILYTLVSGS-----------LPF----- 213
Query: 344 DHPSLEDMQEAVVHKKLR 361
D +L++++E V+ K R
Sbjct: 214 DGQNLKELRERVLRGKYR 231
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 96/225 (42%), Gaps = 39/225 (17%)
Query: 117 VEVKAQGRFGAVWKAKFK--NENVAVKIFLMQDKQSW---QSEQEIFKLPHMEHDNILRY 171
+E +G +G V+KAK + +E VA+K + D + +EI L ++H NI+R
Sbjct: 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCD------FLKCN-IVTWEQLCRIALSMSKGLMH 224
+ +H++ L + CD F CN + E + + KGL
Sbjct: 67 ------HDVLHSDKKLTLVFE----FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
H V HRD K N+L+ + +A+FGLA F G P +V
Sbjct: 117 CHSR-----------NVLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVV 163
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSP 329
T Y P+VL GA +S IDM++ + ELA+ + P
Sbjct: 164 TLWYRPPDVLFGAKLYSTS----IDMWSAGCIFAELANAGRPLFP 204
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 129
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 130 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDXELKILDFGLA- 177
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 178 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 129
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 130 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDXELKILDFGLA- 177
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 178 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 223
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K L QDK+ E +I
Sbjct: 43 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIM 101
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 102 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 159
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 160 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 207 LVRGEP---NVSYICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 250
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 34 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG-INDI 91
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 92 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 145
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 146 ------NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 200 IMLNSKGYTKS----IDIWSVGCILAEMLS 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 78 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 135
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 136 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDXELKILDFGLA- 183
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 184 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 72
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 73 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI 126
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 127 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 176 VKEPGESPIFWY-APESLTES-KFS----VASDVWSFGVVLYELFTYIEKSKSPPAEF 227
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 34/215 (15%)
Query: 117 VEVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR---- 170
+V G FG V++AK E VA+K ++QDK+ E +I + ++H NI+R
Sbjct: 53 TKVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIMR--KLDHCNIVRLRYF 109
Query: 171 -YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLH 226
Y EK+ E ++ ++ T Y + V + +L L S +H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTHGQVGT 285
+ HRD K N+LL D + DFG A G+P + +
Sbjct: 170 -------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICS 213
Query: 286 RRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
R Y APE++ GA +++ ID+++ VL EL
Sbjct: 214 RYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 244
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K ++QDK+ E +I
Sbjct: 28 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIM 86
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 87 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 144
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 145 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 191
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 192 LVRGEP---NVSXICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 235
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K ++QDK+ E +I
Sbjct: 17 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIM 75
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 76 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 133
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 134 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 180
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 181 LVRGEP---NVSXICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 224
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K L QDK+ E +I
Sbjct: 21 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIM 79
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 80 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 138 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 185 LVRGEP---NVSXICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 228
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 118 EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR----- 170
+V G FG V++AK E VA+K ++QDK+ E +I + ++H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIMR--KLDHCNIVRLRYFF 82
Query: 171 YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
Y EK+ E ++ ++ T Y + V + +L L S +H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD K N+LL D + DFG A G+P + +R
Sbjct: 142 ------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
Y APE++ GA +++ ID+++ VL EL
Sbjct: 187 YYRAPELIFGATDYTSS----IDVWSAGCVLAEL 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 41/225 (18%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +LC ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA------LLFEPGKPCGDTHGQVGTRRYM 289
+ HRD K +N+++KSD T I DFGLA + EP +V TR Y
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP---------EVVTRYYR 192
Query: 290 APEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
APEV+ G + + + +D+++ ++ E+ C + P +Y
Sbjct: 193 APEVILG-MGYKEN----VDLWSVGCIMGEMV--CHKILFPGRDY 230
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 118 EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR----- 170
+V G FG V++AK E VA+K ++QDK+ E +I + ++H NI+R
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIMR--KLDHCNIVRLRYFF 83
Query: 171 YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
Y EK+ E ++ ++ T Y + V + +L L S +H
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 142
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD K N+LL D + DFG A G+P + +R
Sbjct: 143 ------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 187
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
Y APE++ GA +++ ID+++ VL EL
Sbjct: 188 YYRAPELIFGATDYTSS----IDVWSAGCVLAEL 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 57/260 (21%)
Query: 81 YYRQRKLGSYFNPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAV 140
Y++ RKLGS + ++ S + ++V + +F K ++ ++N +
Sbjct: 38 YFKVRKLGS--------GAYGEVLLCKEKNGHSEKAIKVIKKSQFD---KGRYSDDNKNI 86
Query: 141 KIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDF 200
+ F + EI L ++H NI++ + + F+L+T ++E G L +
Sbjct: 87 EKF------HEEIYNEISLLKSLDHPNIIKLFDVFEDKKY----FYLVTEFYEGGELFE- 135
Query: 201 LKCNIVTWEQL--CRIALSMSK---GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS 255
I+ + C A M + G+ +LH K + HRD K N+LL++
Sbjct: 136 ---QIINRHKFDECDAANIMKQILSGICYLH-----------KHNIVHRDIKPENILLEN 181
Query: 256 D---LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYA 312
L I DFGL+ F D ++GT Y+APEVL+ N + D+++
Sbjct: 182 KNSLLNIKIVDFGLSSFFSKDYKLRD---RLGTAYYIAPEVLKKKYN------EKCDVWS 232
Query: 313 CALVLWELASRCSSVSPPPG 332
C ++++ L C PP G
Sbjct: 233 CGVIMYILL--CG--YPPFG 248
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 118 EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR----- 170
+V G FG V++AK E VA+K ++QDK+ E +I + ++H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIMR--KLDHCNIVRLRYFF 82
Query: 171 YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
Y EK+ E ++ ++ T Y + V + +L L S +H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD K N+LL D + DFG A G+P + +R
Sbjct: 142 ------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
Y APE++ GA +++ ID+++ VL EL
Sbjct: 187 YYRAPELIFGATDYTSS----IDVWSAGCVLAEL 216
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K ++QDK+ E +I
Sbjct: 21 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIM 79
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 80 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 137
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 138 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 185 LVRGEP---NVSXICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 228
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K L QDK+ E +I
Sbjct: 88 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIM 146
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 147 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 204
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 205 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 251
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 252 LVRGEP---NVSYICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 295
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA+K + Q++ ++ +EI L H+NI+ I
Sbjct: 34 GEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG-INDI 91
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA----- 145
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 146 ------NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 200 IMLNSKGYTKS----IDIWSVGCILAEMLS 225
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 43/232 (18%)
Query: 107 PQQGC--RSIQLVEVKAQGRFGAVWKAKFKNE-----NVAVKIF----LMQDKQSWQSEQ 155
PQ G + L + +G FG V++ + N NVAVK + +K+ + SE
Sbjct: 1 PQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEA 60
Query: 156 EIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIA 215
I K +++H +I++ IG + + W+I + G L +L+ N + + L +
Sbjct: 61 VIMK--NLDHPHIVKLIGIIEEEPT-----WIIMELYPYGELGHYLERNKNSLKVLTLVL 113
Query: 216 LSMSKGLMHLHEEILPNKADSYKPAV--AHRDFKSNNVLLKSDLTAAIADFGLALLFEPG 273
S+ KA +Y ++ HRD N+L+ S + DFGL+ E
Sbjct: 114 YSLQIC-----------KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED- 161
Query: 274 KPCGDTHGQVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
D + TR ++M+PE +INF R D++ A+ +WE+ S
Sbjct: 162 ---EDYYKASVTRLPIKWMSPE----SINFRRFTTAS-DVWMFAVCMWEILS 205
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGXVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K ++QDK+ E +I
Sbjct: 22 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIM 80
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 81 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 138
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 139 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 185
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 186 LVRGEP---NVSYICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 229
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 39/231 (16%)
Query: 106 SPQQGCRSIQLV-----EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIF 158
+P QG Q V +V G FG V++AK E VA+K L QDK+ E +I
Sbjct: 14 TPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-QDKRFKNRELQIM 72
Query: 159 KLPHMEHDNILR-----YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
+ ++H NI+R Y EK+ E ++ ++ T Y + V + +
Sbjct: 73 R--KLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK 130
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALL 269
L L S +H + HRD K N+LL D + DFG A
Sbjct: 131 LYMYQLFRSLAYIHSF-------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 177
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G+P + +R Y APE++ GA +++ ID+++ VL EL
Sbjct: 178 LVRGEP---NVSYICSRYYRAPELIFGATDYTSS----IDVWSAGCVLAEL 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 41/225 (18%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +LC ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA------LLFEPGKPCGDTHGQVGTRRYM 289
+ HRD K +N+++KSD T I DFGLA + EP +V TR Y
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP---------EVVTRYYR 192
Query: 290 APEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
APEV+ G + + + +D+++ ++ E+ C + P +Y
Sbjct: 193 APEVILG-MGYKEN----VDIWSVGCIMGEMV--CHKILFPGRDY 230
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 129
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 130 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 177
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 178 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 66 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 123
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 124 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 171
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 172 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 217
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 43/236 (18%)
Query: 103 SPPSPQQGC--RSIQLVEVKAQGRFGAVWKAKFKNE-----NVAVKIF----LMQDKQSW 151
S PQ G + L + +G FG V++ + N NVAVK + +K+ +
Sbjct: 1 SMGGPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKF 60
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQL 211
SE I K +++H +I++ IG + + W+I + G L +L+ N + + L
Sbjct: 61 MSEAVIMK--NLDHPHIVKLIGIIEEEPT-----WIIMELYPYGELGHYLERNKNSLKVL 113
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAV--AHRDFKSNNVLLKSDLTAAIADFGLALL 269
+ S+ KA +Y ++ HRD N+L+ S + DFGL+
Sbjct: 114 TLVLYSLQIC-----------KAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY 162
Query: 270 FEPGKPCGDTHGQVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
E D + TR ++M+PE +INF R D++ A+ +WE+ S
Sbjct: 163 IED----EDYYKASVTRLPIKWMSPE----SINFRRFTTAS-DVWMFAVCMWEILS 209
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 126
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 127 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 174
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 175 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 118 EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR----- 170
+V G FG V++AK E VA+K ++QDK+ E +I + ++H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIMR--KLDHCNIVRLRYFF 82
Query: 171 YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
Y EK+ E ++ ++ T Y + V + +L L S +H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD K N+LL D + DFG A G+P + +R
Sbjct: 142 ------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSR 186
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
Y APE++ GA +++ ID+++ VL EL
Sbjct: 187 YYRAPELIFGATDYTSS----IDVWSAGCVLAEL 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 144
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 145 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 192
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 193 ----RHTDDEMXGXVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 238
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 34/214 (15%)
Query: 118 EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR----- 170
+V G FG V++AK E VA+K ++QDK+ E +I + ++H NI+R
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKK-VLQDKRFKNRELQIMR--KLDHCNIVRLRYFF 86
Query: 171 YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
Y EK+ E ++ ++ T Y + V + +L L S +H
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 145
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD K N+LL D + DFG A G+P + +R
Sbjct: 146 ------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 190
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
Y APE++ GA +++ ID+++ VL EL
Sbjct: 191 YYRAPELIFGATDYTSS----IDVWSAGCVLAEL 220
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 121 AQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAE 175
+G +G V A + N N VA++ + Q++ ++ +EI L H+NI+ I
Sbjct: 36 GEGAYGMVCSA-YDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIG-INDI 93
Query: 176 KRGESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
R +I + +++ E L LK ++ + +C + +GL ++H
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS------ 146
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP-CGDTHGQVGTRRYMAPE 292
V HRD K +N+LL + I DFGLA + +P G V TR Y APE
Sbjct: 147 -----ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ + +++ ID+++ +L E+ S
Sbjct: 202 IMLNSKGYTKS----IDIWSVGCILAEMLS 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 126
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 127 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDSELKILDFGLA- 174
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 175 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 74 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 131
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 132 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 179
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 180 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 90 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 147
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 148 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 195
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 196 ----RHTDDEMXGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 241
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 126
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 127 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 174
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 175 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 64 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 121
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 122 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 169
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 170 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 64 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 121
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 122 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 169
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 170 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 215
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 120
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 121 DHVQFLIYQILRGLKYIHS------AD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 168
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 169 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 214
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 130
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 131 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDSELKILDFGLA- 178
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 179 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 129
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 130 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 177
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 178 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 77 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 134
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 135 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 182
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 183 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 228
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 126
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 127 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 174
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 175 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 121 AQGRFGAVWKAKFKNENV---AVKI--FLMQDKQSWQSEQEIFKLPHMEHDNILR-YIGA 174
+G +G V A K + A KI + ++D ++ E EI K ++H NI+R Y
Sbjct: 18 GRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK--SLDHPNIIRLYETF 75
Query: 175 EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKA 234
E +T+ +L+ G L +E++ + + +++L A
Sbjct: 76 ED-----NTDIYLVMELCTGGEL----------FERVVHKRVFRESDAARIMKDVLSAVA 120
Query: 235 DSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
+K VAHRD K N L +D + + DFGLA F+PGK +VGT Y++P
Sbjct: 121 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM---RTKVGTPYYVSP 177
Query: 292 EVLEG 296
+VLEG
Sbjct: 178 QVLEG 182
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 130
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 131 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 178
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 179 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 224
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 144
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 145 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 192
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 193 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 238
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 78 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 135
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 136 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 183
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 184 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 229
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 65 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 122
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 123 DHVQFLIYQILRGLKYIHS------AD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 170
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 171 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 86 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 143
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 144 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 191
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 192 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 136
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 137 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 184
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 185 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 230
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 115/278 (41%), Gaps = 31/278 (11%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK--NENVAVKIFLMQDKQSWQSEQEIFK-----LPHME 164
R ++ + +G FG+V ++ +N + + Q + S +Q F+ L +
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 69
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGL 222
D I++Y G L+ Y G L DFL+ + + +L + + KG+
Sbjct: 70 SDFIVKYRGVSY--GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 127
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-- 280
+L HRD + N+L++S+ IADFGLA L K
Sbjct: 128 EYLGSR-----------RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 176
Query: 281 GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSA 340
GQ Y APE L I FSR + D+++ +VL+EL + C P E+ +
Sbjct: 177 GQSPIFWY-APESLSDNI-FSRQS----DVWSFGVVLYELFTYCDKSCSPSAEFLRMMGS 230
Query: 341 EVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALC 378
E D P+L + E + + P P + ++ LC
Sbjct: 231 ER-DVPALSRLLELLEEGQRLPAPPACPAEVHELMKLC 267
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 120
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 121 DHVQFLIYQILRGLKYIHS------AD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 168
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 169 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 214
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 136
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 137 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 184
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 185 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 79 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 136
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 137 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 184
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 185 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 230
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 144
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 145 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 192
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 193 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 238
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 90 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 147
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 148 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 195
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 196 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 241
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 121 AQGRFGAVWKAKFKNENV---AVKI--FLMQDKQSWQSEQEIFKLPHMEHDNILR-YIGA 174
+G +G V A K + A KI + ++D ++ E EI K ++H NI+R Y
Sbjct: 35 GRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK--SLDHPNIIRLYETF 92
Query: 175 EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKA 234
E +T+ +L+ G L +E++ + + +++L A
Sbjct: 93 ED-----NTDIYLVMELCTGGEL----------FERVVHKRVFRESDAARIMKDVLSAVA 137
Query: 235 DSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
+K VAHRD K N L +D + + DFGLA F+PGK +VGT Y++P
Sbjct: 138 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM---RTKVGTPYYVSP 194
Query: 292 EVLEG 296
+VLEG
Sbjct: 195 QVLEG 199
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 86 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 143
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 144 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 191
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 192 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 237
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 30/234 (12%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK--NENVAVKIFLMQDKQSWQSEQEIFK-----LPHME 164
R ++ + +G FG+V ++ +N + + Q + S +Q F+ L +
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 70
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGL 222
D I++Y G L+ Y G L DFL+ + + +L + + KG+
Sbjct: 71 SDFIVKYRGVSY--GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 128
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-- 280
+L HRD + N+L++S+ IADFGLA L K
Sbjct: 129 EYLGSR-----------RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 177
Query: 281 GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
GQ Y APE L I FSR + D+++ +VL+EL + C P E+
Sbjct: 178 GQSPIFWY-APESLSDNI-FSRQS----DVWSFGVVLYELFTYCDKSCSPSAEF 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 130
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 131 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 178
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 179 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 224
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 30/234 (12%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK--NENVAVKIFLMQDKQSWQSEQEIFK-----LPHME 164
R ++ + +G FG+V ++ +N + + Q + S +Q F+ L +
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGL 222
D I++Y G L+ Y G L DFL+ + + +L + + KG+
Sbjct: 83 SDFIVKYRGVSY--GPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-- 280
+L HRD + N+L++S+ IADFGLA L K
Sbjct: 141 EYLGSR-----------RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP 189
Query: 281 GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
GQ Y APE L I FSR + D+++ +VL+EL + C P E+
Sbjct: 190 GQSPIFWY-APESLSDNI-FSRQS----DVWSFGVVLYELFTYCDKSCSPSAEF 237
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 130
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 131 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 178
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 179 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 224
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 42/223 (18%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILR---Y 171
+G+FG V+ A+ K + VA+K+ + ++ Q +EI H+ H NILR Y
Sbjct: 32 GKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNY 91
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQ-LCRIALSMSKGLMHLHEEIL 230
+R +LI Y RG L L+ + EQ I ++ LM+ H +
Sbjct: 92 FYDRRR-------IYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK-- 142
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
V HRD K N+LL IADFG ++ P GT Y+
Sbjct: 143 ---------KVIHRDIKPENLLLGLKGELKIADFGWSV----HAPSLRRKTMCGTLDYLP 189
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
PE++EG ++ ++D++ ++ +EL V PP E
Sbjct: 190 PEMIEGRMHNE-----KVDLWCIGVLCYELL-----VGNPPFE 222
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 40/236 (16%)
Query: 116 LVEVKAQGRFGAVWKAKFKNEN---VAVKIFLMQDKQSWQSEQEIFK-----LPHMEHDN 167
L ++ +G FG+V + K E+ + V + M+ S Q E E F + H N
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 168 ILRYIGA--EKRGESIHTEFWLITAYHERGSLCDFLKCNI-------VTWEQLCRIALSM 218
++R +G E + I +I + + G L +L + + + L + + +
Sbjct: 98 VIRLLGVCIEMSSQGIPKPM-VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
+ G+ E L N+ HRD + N +L+ D+T +ADFGL+ G
Sbjct: 157 ALGM-----EYLSNRN------FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY-- 203
Query: 279 THGQVGTR--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
G++ +++A E L + S+ D++A + +WE+A+R ++P PG
Sbjct: 204 RQGRIAKMPVKWIAIESLADRVYTSKS-----DVWAFGVTMWEIATR--GMTPYPG 252
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCAKLTD 120
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 121 DHVQFLIYQILRGLKYIHS------AD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 168
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 169 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 214
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMAGFVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 100
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 101 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 155 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 203
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 204 VKEPGESPIFWY-APESLTES-KFS----VASDVWSFGVVLYELFTYIEKSKSPPAEF 255
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMAGFVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 9 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 68
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 69 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 123 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 171
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 172 VKEPGESPIFWY-APESLTES-KFSVAS----DVWSFGVVLYELFTYIEKSKSPPAEF 223
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 8 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 67
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 68 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 122 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 170
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 171 VKEPGESPIFWY-APESLTES-KFSVAS----DVWSFGVVLYELFTYIEKSKSPPAEF 222
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 70 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 124 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 173 VKEPGESPIFWY-APESLTES-KFSVAS----DVWSFGVVLYELFTYIEKSKSPPAEF 224
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 14 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 73
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 74 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 128 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 176
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 177 VKEPGESPIFWY-APESLTES-KFSVAS----DVWSFGVVLYELFTYIEKSKSPPAEF 228
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 120
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 121 DHVQFLIYQILRGLKYIHS------AD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 168
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 169 ----RHTDDEMAGFVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 214
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 70 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 124 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 173 VKEPGESPIFWY-APESLTES-KFS----VASDVWSFGVVLYELFTYIEKSKSPPAEF 224
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 16 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 75
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 76 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 129
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 130 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 178
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 179 VKEPGESPIFWY-APESLTES-KFS----VASDVWSFGVVLYELFTYIEKSKSPPAEF 230
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 15 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 74
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 75 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 129 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 177
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 178 VKEPGESPIFWY-APESLTES-KFS----VASDVWSFGVVLYELFTYIEKSKSPPAEF 229
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 72
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 73 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 127 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 176 VKEPGESPIFWY-APESLTES-KFS----VASDVWSFGVVLYELFTYIEKSKSPPAEF 227
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 175 EKRGESIHTEFWLITAYHERGSLCDFL-KCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y RG + L K + ++ ++ L + H +
Sbjct: 82 FHDA----TRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK----- 132
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 133 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLXGTLDYLPPEM 182
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 183 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 212
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 35/214 (16%)
Query: 118 EVKAQGRFGAVWKAKF-KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR-----Y 171
+V G FG V++AK +++ VA+K L QDK+ E +I ++ ++H N++ Y
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVL-QDKRFKNRELQIMRI--VKHPNVVDLKAFFY 102
Query: 172 IGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLH-E 227
+K+ E ++ E+ T Y R S ++ +M L+ L+
Sbjct: 103 SNGDKKDEVFLNLVLEYVPETVY--RAS------------RHYAKLKQTMPMLLIKLYMY 148
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLK-SDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
++L + A + + HRD K N+LL + DFG A + G+P + +R
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXICSR 205
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
Y APE++ GA N++ + ID+++ V+ EL
Sbjct: 206 YYRAPELIFGATNYTTN----IDIWSTGCVMAEL 235
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 88
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 89 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 145
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
+L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 146 KYLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEXXSVHN 192
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 193 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 236
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 237 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 285
Query: 398 VVER 401
+V R
Sbjct: 286 LVSR 289
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ KN +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 17 GKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 77 FHDS----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 127
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 128 ------KVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEM 177
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 178 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 207
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 17 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 76
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 77 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 130
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 131 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 179
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 180 VKEPGESPIFWY-APESLTES-KFS----VASDVWSFGVVLYELFTYIEKSKSPPAEF 231
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 86/174 (49%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I D+GLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDYGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 38/263 (14%)
Query: 89 SYFNPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAK---FKNENVAVKIFLM 145
SY PT P+ P+ ++Q + G FG V +A E+ +K+ +
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRN---NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 146 QDKQSWQSEQ------EIFKLPHM-EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLC 198
K + +++ E+ + H+ +H+NI+ +GA G + +IT Y G L
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV----LVITEYCCYGDLL 138
Query: 199 DFL--KCNIVTWEQLCRIALSM--SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLK 254
+FL K ++ + IA S ++ L+H ++ A HRD + NVLL
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 255 SDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRR----YMAPEVLEGAINFSRDAFLRID 309
+ A I DFGLA D++ V G R +MAPE + F ++ D
Sbjct: 199 NGHVAKIGDFGLAR-----DIMNDSNYIVKGNARLPVKWMAPESI-----FDCVYTVQSD 248
Query: 310 MYACALVLWELASRCSSVSPPPG 332
+++ ++LWE+ S ++P PG
Sbjct: 249 VWSYGILLWEIFSL--GLNPYPG 269
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 87
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 88 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 142 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 191 VKEPGESPIFWY-APESLTES-KFSVAS----DVWSFGVVLYELFTYIEKSKSPPAEF 242
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 87
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 88 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 142 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 191 VKEPGESPIFWY-APESLTES-KFSVAS----DVWSFGVVLYELFTYIEKSKSPPAEF 242
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 35/217 (16%)
Query: 115 QLVEVKAQGRFGAVWK-------AKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDN 167
QL E +G F V + ++ + + K +D Q + E I +L ++H N
Sbjct: 25 QLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRL--LKHPN 82
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
I+R + + F L+T G L + +IV E S H +
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTG----GELFE----DIVAREYYSEADAS------HCIQ 128
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCGDTHGQVG 284
+IL ++ V HRD K N+LL S L A +ADFGLA+ E + G G
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA--WFGFAG 186
Query: 285 TRRYMAPEVLEGAINFSRDAFLR-IDMYACALVLWEL 320
T Y++PEVL +D + + +D++AC ++L+ L
Sbjct: 187 TPGYLSPEVLR------KDPYGKPVDLWACGVILYIL 217
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 38/263 (14%)
Query: 89 SYFNPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAK---FKNENVAVKIFLM 145
SY PT P+ P+ ++Q + G FG V +A E+ +K+ +
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRN---NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 146 QDKQSWQSEQ------EIFKLPHM-EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLC 198
K + +++ E+ + H+ +H+NI+ +GA G + +IT Y G L
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV----LVITEYCCYGDLL 138
Query: 199 DFL--KCNIVTWEQLCRIALSM--SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLK 254
+FL K ++ + IA S ++ L+H ++ A HRD + NVLL
Sbjct: 139 NFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198
Query: 255 SDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRR----YMAPEVLEGAINFSRDAFLRID 309
+ A I DFGLA D++ V G R +MAPE + F ++ D
Sbjct: 199 NGHVAKIGDFGLAR-----DIMNDSNYIVKGNARLPVKWMAPESI-----FDCVYTVQSD 248
Query: 310 MYACALVLWELASRCSSVSPPPG 332
+++ ++LWE+ S ++P PG
Sbjct: 249 VWSYGILLWEIFSL--GLNPYPG 269
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 51 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 108
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 109 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 165
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
+L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 166 KYLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHN 212
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 213 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 256
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 257 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 305
Query: 398 VVER 401
+V R
Sbjct: 306 LVSR 309
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 30 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 88
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +LC ++ + E++ + M G+ HLH
Sbjct: 89 QKSLE-EFQDVYIVMELMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 138
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 139 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 189
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
V+ G + + + +D+++ ++ E+ C + P +Y
Sbjct: 190 VILG-MGYKEN----VDLWSVGCIMGEMV--CHKILFPGRDY 224
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 24 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 81
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 82 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 138
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
+L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 139 KYLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHN 185
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 186 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 229
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 230 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 278
Query: 398 VVER 401
+V R
Sbjct: 279 LVSR 282
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 175 EKRGESIHTEFWLITAYHERGSLCDFL-KCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y RG + L K + ++ ++ L + H +
Sbjct: 82 FHDA----TRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK----- 132
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 133 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 182
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 183 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 212
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 41 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 99
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +LC ++ + E++ + M G+ HLH
Sbjct: 100 QKSLE-EFQDVYIVMELMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 149
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 150 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 200
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
V+ G + + + +D+++ ++ E+ C + P +Y
Sbjct: 201 VILG-MGYKEN----VDLWSVGCIMGEMV--CHKILFPGRDY 235
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 50 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 107
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 108 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 164
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
+L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 165 KYLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHN 211
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 212 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 255
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 256 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 304
Query: 398 VVER 401
+V R
Sbjct: 305 LVSR 308
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTP 94
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 95 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 84
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 85 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 141
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
+L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 142 KYLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHN 188
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 189 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 232
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 233 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 281
Query: 398 VVER 401
+V R
Sbjct: 282 LVSR 285
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 42/230 (18%)
Query: 117 VEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+ V QG FG V KA+ + A+K +++ E+ L + H ++RY A
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 175 --EKR-------GESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLM 223
E+R + ++ Y E +L D + + + + R+ + + L
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA---------LLFE--- 271
++H + + HRD K N+ + I DFGLA L +
Sbjct: 131 YIHSQ-----------GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 272 -PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
PG T +GT Y+A EVL+G +++ +IDMY+ ++ +E+
Sbjct: 180 LPGSSDNLTSA-IGTAMYVATEVLDGTGHYNE----KIDMYSLGIIFFEM 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 89
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 90 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
+L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 147 KYLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHN 193
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 194 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 237
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 238 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 286
Query: 398 VVER 401
+V R
Sbjct: 287 LVSR 290
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 61/319 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 148
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 149 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 205
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 206 KFLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHN 252
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 253 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 296
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 297 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 345
Query: 398 VVERGMLALCDTMEECWDH 416
+V R + E + H
Sbjct: 346 LVSRISAIFSTFIGEHYVH 364
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 86
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 87 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 143
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
+L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 144 KYLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHN 190
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 191 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 234
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 235 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 283
Query: 398 VVER 401
+V R
Sbjct: 284 LVSR 287
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 70 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 124 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 173 VKEPGESPIFWY-APESLTES-KFSVAS----DVWSFGVVLYELFTYIEKSKSPPAEF 224
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 88
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 89 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 145
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
+L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 146 KYLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHN 192
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 193 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 236
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 237 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 285
Query: 398 VVER 401
+V R
Sbjct: 286 LVSR 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 87
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 88 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 144
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
+L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 145 KYLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHN 191
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 192 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 235
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 236 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 284
Query: 398 VVER 401
+V R
Sbjct: 285 LVSR 288
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN-----VAVKI----FLMQDKQSWQSEQEIFKLPHME 164
+++ +V G FG V K VA+K + + ++ + SE I + +
Sbjct: 9 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI--MGQFD 66
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGL 222
H N++ G + T +IT + E GSL FL+ N T QL + ++ G+
Sbjct: 67 HPNVIHLEGVVTKS----TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGM 122
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ 282
+L + HR + N+L+ S+L ++DFGL+ E
Sbjct: 123 KYLADM-----------NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 283 VGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+G + R+ APE ++ R D+++ +V+WE+ S
Sbjct: 172 LGGKIPIRWTAPEAIQ-----YRKFTSASDVWSYGIVMWEVMS 209
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 124/304 (40%), Gaps = 61/304 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 89
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 90 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
+L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 147 KYLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEYYSVHN 193
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 194 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 237
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 238 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 286
Query: 398 VVER 401
+V R
Sbjct: 287 LVSR 290
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNE-NVAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNI 168
I L++ G+FG V K+K + +VAVK+ K+ SE E F+ + + H +
Sbjct: 10 ITLLKELGSGQFGVVKLGKWKGQYDVAVKMI----KEGSMSEDEFFQEAQTMMKLSHPKL 65
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMHLH 226
+++ G + I +++T Y G L ++L+ + E QL + + +G+ L
Sbjct: 66 VKFYGVCSKEYPI----YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE 121
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
HRD + N L+ DL ++DFG+ + VGT+
Sbjct: 122 SH-----------QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS----VGTK 166
Query: 287 ---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ APEV +S + D++A +++WE+ S
Sbjct: 167 FPVKWSAPEVFH-YFKYSSKS----DVWAFGILMWEVFS 200
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 61/319 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 37 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 94
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 95 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 151
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 152 KFLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHN 198
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 199 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 242
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 243 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 291
Query: 398 VVERGMLALCDTMEECWDH 416
+V R + E + H
Sbjct: 292 LVSRISAIFSTFIGEHYVH 310
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 61/319 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 89
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 90 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 147 KFLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHN 193
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 194 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 237
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 238 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 286
Query: 398 VVERGMLALCDTMEECWDH 416
+V R + E + H
Sbjct: 287 LVSRISAIFSTFIGEHYVH 305
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 20/106 (18%)
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCG 277
+ GL HLH+ + +RD K NVLL D I+D GLA+ + G+
Sbjct: 298 IVSGLEHLHQR-----------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-- 344
Query: 278 DTHGQVGTRRYMAPEVLEG-AINFSRDAFLRIDMYACALVLWELAS 322
T G GT +MAPE+L G +FS +D +A + L+E+ +
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFS------VDYFALGVTLYEMIA 384
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 33/209 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 74 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 132
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 133 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 182
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 183 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 233
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELA 321
V+ G + + + +D+++ ++ E+
Sbjct: 234 VILG-MGYKEN----VDIWSVGCIMGEMV 257
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 34/214 (15%)
Query: 118 EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR----- 170
+V G FG V++AK E VA+K ++Q K E +I + ++H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK-VLQGKAFKNRELQIMR--KLDHCNIVRLRYFF 82
Query: 171 YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
Y EK+ E ++ ++ T Y + V + +L L S +H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD K N+LL D + DFG A G+P + +R
Sbjct: 142 ------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSR 186
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
Y APE++ GA +++ ID+++ VL EL
Sbjct: 187 YYRAPELIFGATDYTSS----IDVWSAGCVLAEL 216
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 20/106 (18%)
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCG 277
+ GL HLH+ + +RD K NVLL D I+D GLA+ + G+
Sbjct: 298 IVSGLEHLHQR-----------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-- 344
Query: 278 DTHGQVGTRRYMAPEVLEG-AINFSRDAFLRIDMYACALVLWELAS 322
T G GT +MAPE+L G +FS +D +A + L+E+ +
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFS------VDYFALGVTLYEMIA 384
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 43 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 103 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 153
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 154 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPPEM 203
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 204 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 61/319 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 89
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 90 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 146
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 147 KFLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHN 193
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 194 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 237
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 238 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 286
Query: 398 VVERGMLALCDTMEECWDH 416
+V R + E + H
Sbjct: 287 LVSRISAIFSTFIGEHYVH 305
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 184 EFWLITAYHERGSLCDFLK-CNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVA 242
E + + + GSL LK + E L ++++++ +GL +L E K +
Sbjct: 88 EISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE----------KHQIM 137
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD-THGQVGTRRYMAPEVLEGAINFS 301
HRD K +N+L+ S + DFG++ G+ + VGTR YMAPE L+G ++S
Sbjct: 138 HRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMAPERLQGT-HYS 191
Query: 302 RDAFLRIDMYACALVLWELASRCSSVSPP 330
++ D+++ L L ELA + PP
Sbjct: 192 ----VQSDIWSMGLSLVELAVGRYPIPPP 216
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 20/103 (19%)
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
GL HLH+ + +RD K NVLL D I+D GLA+ + G+ T
Sbjct: 301 GLEHLHQR-----------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT--KTK 347
Query: 281 GQVGTRRYMAPEVLEG-AINFSRDAFLRIDMYACALVLWELAS 322
G GT +MAPE+L G +FS +D +A + L+E+ +
Sbjct: 348 GYAGTPGFMAPELLLGEEYDFS------VDYFALGVTLYEMIA 384
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 61/319 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 87
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 88 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 144
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 145 KFLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHN 191
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 192 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 235
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 236 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 284
Query: 398 VVERGMLALCDTMEECWDH 416
+V R + E + H
Sbjct: 285 LVSRISAIFSTFIGEHYVH 303
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLH------ 226
K+GE++ ++ + G C F+ C + ++L I M+ G +H H
Sbjct: 230 KQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 288
Query: 227 ----------EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPC 276
EI+ + V +RD K N+LL I+D GLA F KP
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 347
Query: 277 GDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H VGT YMAPEVL+ + + A D ++ +L++L
Sbjct: 348 ---HASVGTHGYMAPEVLQKGVAYDSSA----DWFSLGCMLFKL 384
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLH------ 226
K+GE++ ++ + G C F+ C + ++L I M+ G +H H
Sbjct: 230 KQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 288
Query: 227 ----------EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPC 276
EI+ + V +RD K N+LL I+D GLA F KP
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 347
Query: 277 GDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H VGT YMAPEVL+ + + A D ++ +L++L
Sbjct: 348 ---HASVGTHGYMAPEVLQKGVAYDSSA----DWFSLGCMLFKL 384
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQ-LCRIALSMSKGLMHLHEEILPNKADSYKPAVA 242
E + + + GSL LK EQ L ++++++ KGL +L E K +
Sbjct: 140 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE----------KHKIM 189
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD-THGQVGTRRYMAPEVLEGAINFS 301
HRD K +N+L+ S + DFG++ G+ + VGTR YM+PE L+G ++S
Sbjct: 190 HRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGT-HYS 243
Query: 302 RDAFLRIDMYACALVLWELASRCSSVSPPPG-EYRLPFSAEV-GD 344
++ D+++ L L E+A + PP E L F +V GD
Sbjct: 244 ----VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 284
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 61/319 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 90
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 91 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 147
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHG 281
L + HRD + N +L T +ADFGLA +++ K H
Sbjct: 148 KFLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD--KEFDSVHN 194
Query: 282 QVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPF 338
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 195 KTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP-------- 238
Query: 339 SAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSASC 397
+P + V + R L PE L + M +CW AE R S S
Sbjct: 239 ------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFSE 287
Query: 398 VVERGMLALCDTMEECWDH 416
+V R + E + H
Sbjct: 288 LVSRISAIFSTFIGEHYVH 306
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 20/106 (18%)
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCG 277
+ GL HLH+ + +RD K NVLL D I+D GLA+ + G+
Sbjct: 298 IVSGLEHLHQR-----------NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-- 344
Query: 278 DTHGQVGTRRYMAPEVLEG-AINFSRDAFLRIDMYACALVLWELAS 322
T G GT +MAPE+L G +FS +D +A + L+E+ +
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFS------VDYFALGVTLYEMIA 384
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +LC ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHG---QVGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + +V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPEVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLH------ 226
K+GE++ ++ + G C F+ C + ++L I M+ G +H H
Sbjct: 230 KQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 288
Query: 227 ----------EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPC 276
EI+ + V +RD K N+LL I+D GLA F KP
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 347
Query: 277 GDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H VGT YMAPEVL+ + + A D ++ +L++L
Sbjct: 348 ---HASVGTHGYMAPEVLQKGVAYDSSA----DWFSLGCMLFKL 384
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 121 AQGRFGAVWKAKFK--NENVAVKIFLMQDKQSW--QSEQEIFKLPHMEHDNILRYIGAEK 176
+G + V+K K K + VA+K ++ ++ + +E+ L ++H NI+
Sbjct: 11 GEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL----- 65
Query: 177 RGESIHTE--FWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
+ IHTE L+ Y ++ L +L NI+ + + +GL + H +
Sbjct: 66 -HDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---- 119
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
V HRD K N+L+ +ADFGLA P +V T Y P+
Sbjct: 120 -------KVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPD 170
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
+L G+ ++S +IDM+ + +E+A+
Sbjct: 171 ILLGSTDYST----QIDMWGVGCIFYEMAT 196
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 117 VEVKAQGRFGAVWKAKFK-NENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDNILRYI 172
+E +G +G V+KA+ E A+K I L ++ + S +EI L ++H NI++
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
+ IHT+ L+ + + L ++ +C L L + +L
Sbjct: 67 ------DVIHTKKRLVLVF-------EHLDQDLKKLLDVCEGGLESVTAKSFLLQ-LLNG 112
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
A + V HRD K N+L+ + IADFGLA F G P +V T Y AP+
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPD 170
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
VL G+ +S ID+++ + E+ +
Sbjct: 171 VLMGSKKYSTT----IDIWSVGCIFAEMVN 196
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 112/285 (39%), Gaps = 46/285 (16%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHD 166
+V +G+FG V+ A+ K +A+K+ L ++ Q +EI H+ H
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 167 NILR---YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALS-MSKGL 222
NILR Y KR +L+ + RG L L+ + EQ + ++ L
Sbjct: 75 NILRMYNYFHDRKR-------IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ 282
+ HE V HRD K N+L+ IADFG ++ P
Sbjct: 128 HYCHER-----------KVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXM 172
Query: 283 VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG--EYRLPFSA 340
GT Y+ PE++EG + ++D++ ++ +E P +R +
Sbjct: 173 CGTLDYLPPEMIEGKTHDE-----KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 341 EVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECW 385
++ P L D + ++ K LR P+ L L ME W
Sbjct: 228 DLKFPPFLSDGSKDLISKLLRYHPPQR-------LPLKGVMEHPW 265
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTW---EQLCRIALSMSKGLMHLH------ 226
K+GE++ ++ + G C F+ C + ++L I M+ G +H H
Sbjct: 229 KQGETLALNERIMLSLVSTGD-CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 287
Query: 227 ----------EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPC 276
EI+ + V +RD K N+LL I+D GLA F KP
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP- 346
Query: 277 GDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H VGT YMAPEVL+ + + A D ++ +L++L
Sbjct: 347 ---HASVGTHGYMAPEVLQKGVAYDSSA----DWFSLGCMLFKL 383
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 117 VEVKAQGRFGAVWKAKFK-NENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDNILRYI 172
+E +G +G V+KA+ E A+K I L ++ + S +EI L ++H NI++
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 173 GAEKRGESIHTEFWLITAY-HERGSLCDFLKCNIVTWEQLC--RIALSMSKGLMHLHEEI 229
+ IHT+ L+ + H L L E + L + G+ + H+
Sbjct: 67 ------DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR- 119
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYM 289
V HRD K N+L+ + IADFGLA F G P +V T Y
Sbjct: 120 ----------RVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYR 167
Query: 290 APEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
AP+VL G+ +S ID+++ + E+ +
Sbjct: 168 APDVLMGSKKYSTT----IDIWSVGCIFAEMVN 196
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 29/207 (14%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAE 175
+G +G V K + K+ VA+K FL D + +EI L + H+N++ +
Sbjct: 34 GEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC 93
Query: 176 KRGESIHTEFWLITAYHERGSLCDF-LKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKA 234
K+ + ++L+ + + L D L N + ++ + + + G+ H
Sbjct: 94 KKKK----RWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH------ 143
Query: 235 DSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA-LLFEPGKPCGDTHGQVGTRRYMAPEV 293
+ HRD K N+L+ + DFG A L PG+ D +V TR Y APE+
Sbjct: 144 -----NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD---EVATRWYRAPEL 195
Query: 294 LEGAINFSRDAFLRIDMYACALVLWEL 320
L G + + + +D++A ++ E+
Sbjct: 196 LVGDVKYGK----AVDVWAIGCLVTEM 218
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 37 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 95
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 96 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 145
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 146 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 196
Query: 293 VLEG 296
V+ G
Sbjct: 197 VILG 200
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 94
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 95 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQ-LCRIALSMSKGLMHLHEEILPNKADSYKPAVA 242
E + + + GSL LK EQ L ++++++ KGL +L E K +
Sbjct: 105 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE----------KHKIM 154
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD-THGQVGTRRYMAPEVLEGAINFS 301
HRD K +N+L+ S + DFG++ G+ + VGTR YM+PE L+G ++S
Sbjct: 155 HRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGT-HYS 208
Query: 302 RDAFLRIDMYACALVLWELASRCSSVSPPPG-EYRLPFSAEV-GD 344
++ D+++ L L E+A + PP E L F +V GD
Sbjct: 209 ----VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 249
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 35 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 93
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 94 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 143
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 144 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 194
Query: 293 VLEG 296
V+ G
Sbjct: 195 VILG 198
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 43 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 102
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 103 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 153
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 154 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 203
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 204 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 233
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 94
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 95 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 37 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 95
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 96 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 145
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 146 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 196
Query: 293 VLEG 296
V+ G
Sbjct: 197 VILG 200
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 30 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 88
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 89 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 138
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 139 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 189
Query: 293 VLEG 296
V+ G
Sbjct: 190 VILG 193
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 146/349 (41%), Gaps = 55/349 (15%)
Query: 90 YFNPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQ 149
YF + E H T +P+ +++ G FG V+KA+ K +V ++ K
Sbjct: 19 YFQSMKQYE-HVTRDLNPEDFW---EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS 74
Query: 150 SWQSEQ---EIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI- 205
+ E EI L +H NI++ + A W++ + G++ D + +
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAF----YYENNLWILIEFCAGGAV-DAVMLELE 129
Query: 206 --VTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+T Q+ + L +LH+ NK + HRD K+ N+L D +AD
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHD----NK-------IIHRDLKAGNILFTLDGDIKLAD 178
Query: 264 FGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
FG++ + + +GT +MAPEV+ + R + D+++ + L E+A
Sbjct: 179 FGVSA--KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA-- 234
Query: 324 CSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAV-VHKKLRPTL--PETWKQHAGMLALCDT 380
+ PP H L M+ + + K PTL P W + D
Sbjct: 235 --EIEPP--------------HHELNPMRVLLKIAKSEPPTLAQPSRWSSN-----FKDF 273
Query: 381 MEECWDHDAEARLSASCVVERGMLALCDTMEECWDHDAEARLSASCVVE 429
+++C + + +AR + S +++ + + D+ + + AEA+ + VE
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFVTV-DSNKPIRELIAEAKAEVTEEVE 321
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 30 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 88
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 89 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 138
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 139 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 189
Query: 293 VLEG 296
V+ G
Sbjct: 190 VILG 193
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 74 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 132
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 133 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 182
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 183 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 233
Query: 293 VLEG 296
V+ G
Sbjct: 234 VILG 237
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 29 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 87
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +LC ++ + E++ + M G+ HLH
Sbjct: 88 QKTLEEFQDVYLVMELMD-ANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 137
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 138 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 188
Query: 293 VLEG 296
V+ G
Sbjct: 189 VILG 192
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 110/277 (39%), Gaps = 46/277 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILR---Y 171
+G+FG V+ A+ K +A+K+ L ++ Q +EI H+ H NILR Y
Sbjct: 23 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNY 82
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALS-MSKGLMHLHEEIL 230
KR +L+ + RG L L+ + EQ + ++ L + HE
Sbjct: 83 FHDRKR-------IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER-- 133
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
V HRD K N+L+ IADFG ++ P GT Y+
Sbjct: 134 ---------KVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLP 180
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG--EYRLPFSAEVGDHPSL 348
PE++EG + ++D++ ++ +E P +R + ++ P L
Sbjct: 181 PEMIEGKTHDE-----KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL 235
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECW 385
D + ++ K LR P+ L L ME W
Sbjct: 236 SDGSKDLISKLLRYHPPQR-------LPLKGVMEHPW 265
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 41/220 (18%)
Query: 115 QLVEVKAQGRFGAVWK-------AKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDN 167
QL E +G F V + ++ + + K +D Q + E I +L ++H N
Sbjct: 7 QLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL--LKHPN 64
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
I+R + + F L+T G L + +IV E S H +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTG----GELFE----DIVAREYYSEADAS------HCIQ 110
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCGDTH---G 281
+IL + + + HRD K N+LL S A +ADFGLA+ + GD G
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ-----GDQQAWFG 165
Query: 282 QVGTRRYMAPEVLEGAINFSRDAFLR-IDMYACALVLWEL 320
GT Y++PEVL +D + + +DM+AC ++L+ L
Sbjct: 166 FAGTPGYLSPEVLR------KDPYGKPVDMWACGVILYIL 199
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 78/192 (40%), Gaps = 37/192 (19%)
Query: 121 AQGRFGAVWKA--KFKNENVAVKIFL---------MQDKQSWQSEQEIFKLPHMEHDNIL 169
G FG VW A K KN+ V VK ++D + + EI L +EH NI+
Sbjct: 33 GSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANII 92
Query: 170 RYIGA-EKRGESIHTEFWLITAYHERG-SLCDFLKCNIVTWEQLCRIA---LSMSKGLMH 224
+ + E +G F L+ H G L F+ + E L L + G +
Sbjct: 93 KVLDIFENQGF-----FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR 147
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + + HRD K N+++ D T + DFG A E GK + G
Sbjct: 148 LKD-------------IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF---YTFCG 191
Query: 285 TRRYMAPEVLEG 296
T Y APEVL G
Sbjct: 192 TIEYCAPEVLMG 203
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 110/277 (39%), Gaps = 46/277 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILR---Y 171
+G+FG V+ A+ K +A+K+ L ++ Q +EI H+ H NILR Y
Sbjct: 24 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNY 83
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALS-MSKGLMHLHEEIL 230
KR +L+ + RG L L+ + EQ + ++ L + HE
Sbjct: 84 FHDRKR-------IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER-- 134
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
V HRD K N+L+ IADFG ++ P GT Y+
Sbjct: 135 ---------KVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLP 181
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG--EYRLPFSAEVGDHPSL 348
PE++EG + ++D++ ++ +E P +R + ++ P L
Sbjct: 182 PEMIEGKTHDE-----KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFL 236
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECW 385
D + ++ K LR P+ L L ME W
Sbjct: 237 SDGSKDLISKLLRYHPPQR-------LPLKGVMEHPW 266
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I FGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILGFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 146/349 (41%), Gaps = 55/349 (15%)
Query: 90 YFNPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQ 149
YF + E H T +P+ +++ G FG V+KA+ K +V ++ K
Sbjct: 19 YFQSMKQYE-HVTRDLNPEDFW---EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS 74
Query: 150 SWQSEQ---EIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI- 205
+ E EI L +H NI++ + A W++ + G++ D + +
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAF----YYENNLWILIEFCAGGAV-DAVMLELE 129
Query: 206 --VTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+T Q+ + L +LH+ NK + HRD K+ N+L D +AD
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHD----NK-------IIHRDLKAGNILFTLDGDIKLAD 178
Query: 264 FGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
FG++ + + +GT +MAPEV+ + R + D+++ + L E+A
Sbjct: 179 FGVSA--KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA-- 234
Query: 324 CSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAV-VHKKLRPTL--PETWKQHAGMLALCDT 380
+ PP H L M+ + + K PTL P W + D
Sbjct: 235 --EIEPP--------------HHELNPMRVLLKIAKSEPPTLAQPSRWSSN-----FKDF 273
Query: 381 MEECWDHDAEARLSASCVVERGMLALCDTMEECWDHDAEARLSASCVVE 429
+++C + + +AR + S +++ + + D+ + + AEA+ + VE
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFVTV-DSNKPIRELIAEAKAEVTEEVE 321
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 117 VEVKAQGRFGAVWKAKFK-NENVAVK-IFLMQDKQSWQSE--QEIFKLPHMEHDNILRYI 172
+E +G +G V+KA+ E A+K I L ++ + S +EI L ++H NI++
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
+ IHT+ L+ + + L ++ +C L L + +L
Sbjct: 67 ------DVIHTKKRLVLVF-------EHLDQDLKKLLDVCEGGLESVTAKSFLLQ-LLNG 112
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
A + V HRD K N+L+ + IADFGLA F G P ++ T Y AP+
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPD 170
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELAS 322
VL G+ +S ID+++ + E+ +
Sbjct: 171 VLMGSKKYSTT----IDIWSVGCIFAEMVN 196
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +K +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKXQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDXELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQ-LCRIALSMSKGLMHLHEEILPNKADSYKPAVA 242
E + + + GSL LK EQ L ++++++ KGL +L E K +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE----------KHKIM 127
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD-THGQVGTRRYMAPEVLEGAINFS 301
HRD K +N+L+ S + DFG++ G+ + VGTR YM+PE L+G ++S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGT-HYS 181
Query: 302 RDAFLRIDMYACALVLWELASRCSSVSPPPG-EYRLPFSAEV-GD 344
++ D+++ L L E+A + PP E L F +V GD
Sbjct: 182 ----VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 222
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 41/220 (18%)
Query: 115 QLVEVKAQGRFGAVWKA-------KFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDN 167
QL E +G F V + ++ + + K +D Q + E I +L ++H N
Sbjct: 7 QLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRL--LKHSN 64
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
I+R + + F L+T G L + +IV E S H +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTG----GELFE----DIVAREYYSEADAS------HCIQ 110
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCGDTH---G 281
+IL ++ V HRD K N+LL S A +ADFGLA+ + GD G
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-----GDQQAWFG 165
Query: 282 QVGTRRYMAPEVLEGAINFSRDAFLR-IDMYACALVLWEL 320
GT Y++PEVL ++A+ + +D++AC ++L+ L
Sbjct: 166 FAGTPGYLSPEVLR------KEAYGKPVDIWACGVILYIL 199
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 41/220 (18%)
Query: 115 QLVEVKAQGRFGAVWK-------AKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDN 167
QL E +G F V + ++ + + K +D Q + E I +L ++H N
Sbjct: 7 QLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRL--LKHPN 64
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
I+R + + F L+T G L + +IV E S H +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTG----GELFE----DIVAREYYSEADAS------HCIQ 110
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCGDTH---G 281
+IL + + + HRD K N+LL S A +ADFGLA+ + GD G
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ-----GDQQAWFG 165
Query: 282 QVGTRRYMAPEVLEGAINFSRDAFLR-IDMYACALVLWEL 320
GT Y++PEVL +D + + +DM+AC ++L+ L
Sbjct: 166 FAGTPGYLSPEVLR------KDPYGKPVDMWACGVILYIL 199
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVVAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +L ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLSQVIQMEL-DHERMSYLLYQMLVGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWEL 320
V+ G + + + +D+++ +++ E+
Sbjct: 196 VILG-MGYKEN----VDIWSVGVIMGEM 218
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 24/136 (17%)
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCGDTH 280
H ++IL + A + + HR+ K N+LL S A +ADFGLA+ + H
Sbjct: 132 HCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW---H 188
Query: 281 GQVGTRRYMAPEVLEGAINFSRDAFLR-IDMYACALVLWELASRCSSVSPPP----GEYR 335
G GT Y++PEVL+ +D + + +D++AC ++L+ L V PP ++R
Sbjct: 189 GFAGTPGYLSPEVLK------KDPYSKPVDIWACGVILYILL-----VGYPPFWDEDQHR 237
Query: 336 LPFSAEVG--DHPSLE 349
L + G D+PS E
Sbjct: 238 LYAQIKAGAYDYPSPE 253
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 27/161 (16%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNIL 169
G + LVE G F A+ + + QD++ Q E ++ +L H NIL
Sbjct: 41 GFSYVDLVEGLHDGHFYALKRILCHEQ---------QDREEAQREADMHRL--FNHPNIL 89
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFL-----KCNIVTWEQLCRIALSMSKGLMH 224
R + R E WL+ + +RG+L + + K N +T +Q+ + L + +GL
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
+H A Y AHRD K N+LL + + D G
Sbjct: 150 IH-------AKGY----AHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLAL-LFEPGKPCGDT 279
H +IL + + HRD K NVLL S +A + DFG+A+ L E G G
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG-- 191
Query: 280 HGQVGTRRYMAPEVLEGAINFSRDAFLR-IDMYACALVLWELASRC 324
G+VGT +MAPEV++ R+ + + +D++ C ++L+ L S C
Sbjct: 192 -GRVGTPHFMAPEVVK------REPYGKPVDVWGCGVILFILLSGC 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQ-LCRIALSMSKGLMHLHEEILPNKADSYKPAVA 242
E + + + GSL LK EQ L ++++++ KGL +L E K +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE----------KHKIM 127
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD-THGQVGTRRYMAPEVLEGAINFS 301
HRD K +N+L+ S + DFG++ G+ + VGTR YM+PE L+G ++S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGT-HYS 181
Query: 302 RDAFLRIDMYACALVLWELASRCSSVSPPPG-EYRLPFSAEV-GD 344
++ D+++ L L E+A + PP E L F +V GD
Sbjct: 182 ----VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 222
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 43/262 (16%)
Query: 83 RQRKLGSYFNPVPTLEPHPTSPPSPQQGCRSI------QLVEVKAQGRFGAVWKAKFKNE 136
R+R L +EP S +P Q I + ++V G FG V+K + E
Sbjct: 14 RKRTLRRLLQERELVEPLTPSGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPE 73
Query: 137 NVAVKI----FLMQDKQSWQSEQEI----FKLPHMEHDNILRYIGAEKRGESIHTEFWLI 188
VKI +++ S ++ +EI + + +++ ++ R +G + + LI
Sbjct: 74 GEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGI-----CLTSTVQLI 128
Query: 189 TAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRD 245
T G L D++ K NI + + L + ++KG+ +L + L HRD
Sbjct: 129 TQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYLEDRRL-----------VHRD 176
Query: 246 FKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR--RYMAPEVLEGAINFSRD 303
+ NVL+K+ I DFGLA L G + H + G ++MA E + I +
Sbjct: 177 LAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 234
Query: 304 AFLRIDMYACALVLWELASRCS 325
D+++ + +WEL + S
Sbjct: 235 -----DVWSYGVTVWELMTFGS 251
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 63/305 (20%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-----KNENVAVK----IFLMQDKQSWQSEQEIFKLPHME 164
+ EV +G FG V+ K + AVK I + + + +E I K
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK--DFS 90
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGL 222
H N+L +G R E ++ Y + G L +F++ + T + L L ++KG+
Sbjct: 91 HPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM 147
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA--LLFEPGKPCGDTH 280
L + HRD + N +L T +ADFGLA +L K H
Sbjct: 148 KFLASK-----------KFVHRDLAARNCMLDEKFTVKVADFGLARDML---DKEFDSVH 193
Query: 281 GQVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLP 337
+ G + ++MA E L+ ++ + D+++ ++LWEL +R +PP
Sbjct: 194 NKTGAKLPVKWMALESLQ-----TQKFTTKSDVWSFGVLLWELMTRG---APP------- 238
Query: 338 FSAEVGDHPSLEDMQEAVVHKKLRPTL-PETWKQHAGMLALCDTMEECWDHDAEARLSAS 396
+P + V + R L PE L + M +CW AE R S S
Sbjct: 239 -------YPDVNTFDITVYLLQGRRLLQPEYCPD-----PLYEVMLKCWHPKAEMRPSFS 286
Query: 397 CVVER 401
+V R
Sbjct: 287 ELVSR 291
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQ-LCRIALSMSKGLMHLHEEILPNKADSYKPAVA 242
E + + + GSL LK EQ L ++++++ KGL +L E K +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE----------KHKIM 127
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD-THGQVGTRRYMAPEVLEGAINFS 301
HRD K +N+L+ S + DFG++ G+ + VGTR YM+PE L+G ++S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGT-HYS 181
Query: 302 RDAFLRIDMYACALVLWELASRCSSVSPPPG-EYRLPFSAEV-GD 344
++ D+++ L L E+A + PP E L F +V GD
Sbjct: 182 ----VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 222
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQ-LCRIALSMSKGLMHLHEEILPNKADSYKPAVA 242
E + + + GSL LK EQ L ++++++ KGL +L E K +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE----------KHKIM 127
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD-THGQVGTRRYMAPEVLEGAINFS 301
HRD K +N+L+ S + DFG++ G+ + VGTR YM+PE L+G ++S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGT-HYS 181
Query: 302 RDAFLRIDMYACALVLWELASRCSSVSPPPG-EYRLPFSAEV-GD 344
++ D+++ L L E+A + PP E L F +V GD
Sbjct: 182 ----VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGD 222
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ ++ +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 11 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 70
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI Y GSL D+L+ + + +L + +
Sbjct: 71 HDNIVKYKGVCYSAGRRN------LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HR+ + N+L++++ I DFGL + K
Sbjct: 125 CKGMEYLGTK-----------RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 173
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 174 VKEPGESPIFWY-APESLTES-KFSVAS----DVWSFGVVLYELFTYIEKSKSPPAEF 225
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +LC ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTP 94
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +L ++ + E++ + M G+ HLH
Sbjct: 95 QKTLEEFQDVYLVMELMD-ANLXQVIQMEL-DHERMSYLLYQMLXGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 34/214 (15%)
Query: 118 EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR----- 170
+V G FG V++AK E VA+K ++Q K E +I + ++H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK-VLQGKAFKNRELQIMR--KLDHCNIVRLRYFF 82
Query: 171 YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
Y EK+ E ++ ++ T Y + V + +L L S +H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD K N+LL D + DFG A G+P + +R
Sbjct: 142 ------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSR 186
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
Y APE++ GA +++ ID+++ VL EL
Sbjct: 187 YYRAPELIFGATDYTSS----IDVWSAGCVLAEL 216
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 91/214 (42%), Gaps = 34/214 (15%)
Query: 118 EVKAQGRFGAVWKAKF--KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR----- 170
+V G FG V++AK E VA+K ++Q K E +I + ++H NI+R
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKK-VLQGKAFKNRELQIMR--KLDHCNIVRLRYFF 82
Query: 171 YIGAEKRGE---SIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
Y EK+ E ++ ++ T Y + V + +L L S +H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTA-AIADFGLALLFEPGKPCGDTHGQVGTR 286
+ HRD K N+LL D + DFG A G+P + +R
Sbjct: 142 ------------GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSYICSR 186
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
Y APE++ GA +++ ID+++ VL EL
Sbjct: 187 YYRAPELIFGATDYTSS----IDVWSAGCVLAEL 216
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 80 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 130
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 131 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEM 180
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 181 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 77 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 127
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 177
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 178 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 207
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 34 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 93
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 94 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 144
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 145 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 194
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 195 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 224
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 37 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 95
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +LC ++ + E++ + M G+ HLH
Sbjct: 96 QKSLE-EFQDVYIVMELMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 145
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 146 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 196
Query: 293 VLEG 296
V+ G
Sbjct: 197 VILG 200
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 40/228 (17%)
Query: 132 KFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAY 191
+F + + K +D Q + E I + ++H NI+R + + + F L+T
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTG- 89
Query: 192 HERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNV 251
G L + +IV E S H ++IL + A + + HR+ K N+
Sbjct: 90 ---GELFE----DIVAREFYSEADAS------HCIQQILESIAYCHSNGIVHRNLKPENL 136
Query: 252 LLKSDLTAA---IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLR- 307
LL S A +ADFGLA+ + HG GT Y++PEVL+ +D + +
Sbjct: 137 LLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYLSPEVLK------KDPYSKP 187
Query: 308 IDMYACALVLWELASRCSSVSPPP----GEYRLPFSAEVG--DHPSLE 349
+D++AC ++L+ L V PP ++RL + G D+PS E
Sbjct: 188 VDIWACGVILYILL-----VGYPPFWDEDQHRLYAQIKAGAYDYPSPE 230
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 146/349 (41%), Gaps = 55/349 (15%)
Query: 90 YFNPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQ 149
YF + E H T +P+ +++ G FG V+KA+ K +V ++ K
Sbjct: 19 YFQSMKQYE-HVTRDLNPEDFW---EIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS 74
Query: 150 SWQSEQ---EIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI- 205
+ E EI L +H NI++ + A W++ + G++ D + +
Sbjct: 75 EEELEDYMVEIDILASCDHPNIVKLLDAF----YYENNLWILIEFCAGGAV-DAVMLELE 129
Query: 206 --VTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+T Q+ + L +LH+ NK + HRD K+ N+L D +AD
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHD----NK-------IIHRDLKAGNILFTLDGDIKLAD 178
Query: 264 FGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
FG++ + + +GT +MAPEV+ + R + D+++ + L E+A
Sbjct: 179 FGVSA--KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA-- 234
Query: 324 CSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAV-VHKKLRPTL--PETWKQHAGMLALCDT 380
+ PP H L M+ + + K PTL P W + D
Sbjct: 235 --EIEPP--------------HHELNPMRVLLKIAKSEPPTLAQPSRWSSN-----FKDF 273
Query: 381 MEECWDHDAEARLSASCVVERGMLALCDTMEECWDHDAEARLSASCVVE 429
+++C + + +AR + S +++ + + D+ + + AEA+ + VE
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFVTV-DSNKPIRELIAEAKAEVTEEVE 321
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I D GLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDAGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 40/228 (17%)
Query: 132 KFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAY 191
+F + + K +D Q + E I + ++H NI+R + + + F L+T
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTG- 89
Query: 192 HERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNV 251
G L + +IV E S H ++IL + A + + HR+ K N+
Sbjct: 90 ---GELFE----DIVAREFYSEADAS------HCIQQILESIAYCHSNGIVHRNLKPENL 136
Query: 252 LLKSDLTAA---IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLR- 307
LL S A +ADFGLA+ + HG GT Y++PEVL+ +D + +
Sbjct: 137 LLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYLSPEVLK------KDPYSKP 187
Query: 308 IDMYACALVLWELASRCSSVSPPP----GEYRLPFSAEVG--DHPSLE 349
+D++AC ++L+ L V PP ++RL + G D+PS E
Sbjct: 188 VDIWACGVILYILL-----VGYPPFWDEDQHRLYAQIKAGAYDYPSPE 230
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DF LA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFYLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 78 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 128
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 129 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDTLCGTLDYLPPEM 178
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 179 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 40/228 (17%)
Query: 132 KFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAY 191
+F + + K +D Q + E I + ++H NI+R + + + F L+T
Sbjct: 32 EFAAKIINTKKLSARDFQKLEREARICR--KLQHPNIVRLHDSIQEESFHYLVFDLVTG- 88
Query: 192 HERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNV 251
G L + +IV E S H ++IL + A + + HR+ K N+
Sbjct: 89 ---GELFE----DIVAREFYSEADAS------HCIQQILESIAYCHSNGIVHRNLKPENL 135
Query: 252 LLKSDLTAA---IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLR- 307
LL S A +ADFGLA+ + HG GT Y++PEVL+ +D + +
Sbjct: 136 LLASKAKGAAVKLADFGLAIEVNDSEAW---HGFAGTPGYLSPEVLK------KDPYSKP 186
Query: 308 IDMYACALVLWELASRCSSVSPPP----GEYRLPFSAEVG--DHPSLE 349
+D++AC ++L+ L V PP ++RL + G D+PS E
Sbjct: 187 VDIWACGVILYILL-----VGYPPFWDEDQHRLYAQIKAGAYDYPSPE 229
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 77 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 127
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEM 177
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 178 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 207
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 38 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 96
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +LC ++ + E++ + M G+ HLH
Sbjct: 97 QKSLE-EFQDVYIVMELMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 146
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 147 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMVPFVVTRYYRAPE 197
Query: 293 VLEG 296
V+ G
Sbjct: 198 VILG 201
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 19 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 79 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 129
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 130 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEM 179
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 180 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 209
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +LC ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLCQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 77 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 127
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEM 177
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 178 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQ------SWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K + + ++ Q Q +E+ H+ H NILR G
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 80 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 130
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 131 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPPEM 180
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 181 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 78 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 128
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 129 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEM 178
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 179 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 208
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 80 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 130
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 131 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 180
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 181 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 210
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I D GLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDRGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 82 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 132
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 133 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEM 182
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 183 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 212
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 101/242 (41%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKFKN-------ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDN 167
+G FG V A+ E V V + +++D + + SE E+ K+ +H N
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKN 102
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I AY +G+L ++L+ +T++
Sbjct: 103 IINLLGACTQDGPL----YVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L +++G+ +L + HRD + NVL+ + IADFGLA
Sbjct: 159 LVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
T ++MAPE L F R + D+++ +++WE+ + SP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPY 260
Query: 331 PG 332
PG
Sbjct: 261 PG 262
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +KC +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKCQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I D GLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDGGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 77 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 127
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEM 177
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 178 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 207
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +K +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKXQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGLA
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDCELKILDFGLA- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 30/195 (15%)
Query: 137 NVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAY 191
NVAVK + ++ +E+ L + H NI+ + +++ + +L+
Sbjct: 51 NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 192 HERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNV 251
+ +LC + + E++ + M G+ HLH + HRD K +N+
Sbjct: 111 MD-ANLCQVIHMEL-DHERMSYLLYQMLCGIKHLH-----------SAGIIHRDLKPSNI 157
Query: 252 LLKSDLTAAIADFGLALLFEPGKPCGDTHGQ--VGTRRYMAPEVLEGAINFSRDAFLRID 309
++KSD T I DFGLA C + V TR Y APEV+ G + ++ + +D
Sbjct: 158 VVKSDCTLKILDFGLA-----RTACTNFMMTPYVVTRYYRAPEVILG-MGYAAN----VD 207
Query: 310 MYACALVLWELASRC 324
+++ ++ EL C
Sbjct: 208 IWSVGCIMGELVKGC 222
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 77 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 127
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTELCGTLDYLPPEM 177
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 178 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 207
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 33/208 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +L ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLSQVIQMEL-DHERMSYLLYQMLVGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWEL 320
V+ G + + + +D+++ +++ E+
Sbjct: 196 VILG-MGYKEN----VDIWSVGVIMGEM 218
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQ------SWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K + + ++ Q Q +E+ H+ H NILR G
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 77 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 127
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEM 177
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 178 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 207
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 22/149 (14%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQ-LCRIALSMSKGLMHLHEEILPNKADSYKPAVA 242
E + + + GSL LK EQ L ++++++ KGL +L E K +
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE----------KHKIM 127
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD-THGQVGTRRYMAPEVLEGAINFS 301
HRD K +N+L+ S + DFG++ G+ + VGTR YM+PE L+G ++S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGT-HYS 181
Query: 302 RDAFLRIDMYACALVLWELASRCSSVSPP 330
++ D+++ L L E+A + PP
Sbjct: 182 ----VQSDIWSMGLSLVEMAVGRYPIPPP 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 82 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 132
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 133 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 182
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 183 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 212
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 115 QLVEVKAQGRFGAVWK-------AKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDN 167
QL E +G F V + ++ + K +D Q + E I +L ++H N
Sbjct: 14 QLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL--LKHPN 71
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
I+R + + F L+T G L + +IV E S H +
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTG----GELFE----DIVAREYYSEADAS------HCIQ 117
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCGDTHGQVG 284
+IL ++ V HR+ K N+LL S L A +ADFGLA+ E + G G
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW--FGFAG 175
Query: 285 TRRYMAPEVLEGAINFSRDAFLR-IDMYACALVLWEL 320
T Y++PEVL +D + + +D++AC ++L+ L
Sbjct: 176 TPGYLSPEVLR------KDPYGKPVDLWACGVILYIL 206
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 32/149 (21%)
Query: 155 QEIFKLPHMEHDNILRYIG--AEKRGESIHTEFWLITAYHERGSLCD----FLKCNIVTW 208
+E+ L ++H NI++ +KR ++L+ ++ G L D +K N V
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRN------YYLVMECYKGGELFDEIIHRMKFNEVDA 138
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFG 265
+ + LS G+ +LH K + HRD K N+LL+S D I DFG
Sbjct: 139 AVIIKQVLS---GVTYLH-----------KHNIVHRDLKPENLLLESKEKDALIKIVDFG 184
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
L+ +FE K + ++GT Y+APEVL
Sbjct: 185 LSAVFENQKKMKE---RLGTAYYIAPEVL 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQ------SWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K + + ++ Q Q +E+ H+ H NILR G
Sbjct: 16 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 75
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 76 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 126
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 127 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 176
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 177 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQ------SWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K + + ++ Q Q +E+ H+ H NILR G
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 80 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 130
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 131 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEM 180
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 181 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 210
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQ------SWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K + + ++ Q Q +E+ H+ H NILR G
Sbjct: 14 GKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 73
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 74 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 124
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 125 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 174
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 175 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQ------SWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K + + ++ Q Q +E+ H+ H NILR G
Sbjct: 17 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 76
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 77 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 127
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 128 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTXLCGTLDYLPPEM 177
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 178 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQ------SWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K + + ++ Q Q +E+ H+ H NILR G
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 80 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 130
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 131 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 180
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 181 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 21 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 81 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 131
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE+
Sbjct: 132 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 181
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 182 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 211
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 39/214 (18%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIFLMQDKQSWQSE---QEIFKLPHMEHDNILRYIGAE 175
+G +G V+K + ++ VA+K FL + + +EI L ++H N++ +
Sbjct: 12 GEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF 71
Query: 176 KRGESIHTEFWLI--TAYHE-----RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEE 228
+R +H F T HE RG +K +TW+ L +
Sbjct: 72 RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS--ITWQTLQAVNFC----------- 118
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+K HRD K N+L+ + DFG A L P +V TR Y
Sbjct: 119 --------HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLT--GPSDYYDDEVATRWY 168
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+PE+L G + +D++A V EL S
Sbjct: 169 RSPELLVGDTQYGPP----VDVWAIGCVFAELLS 198
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQ------SWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ + + + ++ Q Q +E+ H+ H NILR G
Sbjct: 21 GKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 81 FHDA----TRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK----- 131
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S+ IADFG ++ P GT Y+ PE+
Sbjct: 132 ------RVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRDTLCGTLDYLPPEM 181
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 182 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGMPPFE 211
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 106 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 153
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 208
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 209 KSAXKSSDLWALGCIIYQLVA 229
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 72 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ S+ + DFGL+ E + G++
Sbjct: 127 LESK-----------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP 175
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 176 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 205
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 94
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +L ++ + E++ + M G+ HLH
Sbjct: 95 QKTLEEFQDVYLVMELMD-ANLXQVIQMEL-DHERMSYLLYQMLXGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 107 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 154
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT-----E 209
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 210 KSACKSSDLWALGCIIYQLVA 230
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQ------SWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ + + + ++ Q Q +E+ H+ H NILR G
Sbjct: 21 GKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 80
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 81 FHDA----TRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK----- 131
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S+ IADFG ++ P GT Y+ PE+
Sbjct: 132 ------RVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 181
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 182 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGMPPFE 211
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 29 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 87
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +L ++ + E++ + M G+ HLH
Sbjct: 88 QKTLEEFQDVYLVMELMD-ANLXQVIQMEL-DHERMSYLLYQMLXGIKHLHS-------- 137
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 138 ---AGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 188
Query: 293 VLEG 296
V+ G
Sbjct: 189 VILG 192
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKFKN-------ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDN 167
+G FG V A+ E V V + +++D + + SE E+ K+ +H N
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKN 102
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ +T++
Sbjct: 103 IINLLGACTQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L +++G+ +L + HRD + NVL+ + IADFGLA
Sbjct: 159 LVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
+T ++MAPE L F R + D+++ +++WE+ + SP
Sbjct: 208 NNIDYYKNTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPY 260
Query: 331 PG 332
PG
Sbjct: 261 PG 262
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 104 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 151
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT-----E 206
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 207 KSACKSSDLWALGCIIYQLVA 227
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 22 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 81
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 82 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 132
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG ++ P GT Y+ PE
Sbjct: 133 ------RVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEX 182
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG R ++D+++ ++ +E V PP E
Sbjct: 183 IEG-----RXHDEKVDLWSLGVLCYEFL-----VGKPPFE 212
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 18/105 (17%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEG 296
++ + HRD K N+LL +L IADFGL+ + G + G+ Y APEV+ G
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPEVING 181
Query: 297 AINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAE 341
+ A +D+++C +VL+ + RLPF E
Sbjct: 182 KLY----AGPEVDVWSCGIVLYVMLVG-----------RLPFDDE 211
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 83 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 130
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 185
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 186 KSACKSSDLWALGCIIYQLVA 206
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 84 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 131
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 186
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 187 KSACKSSDLWALGCIIYQLVA 207
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 34 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 91
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ E +A ++ + EI
Sbjct: 92 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 147
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRY 288
A HRD + N ++ D T I DFG+ ++E G + R+
Sbjct: 148 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 206
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
M+PE L+ + + D+++ +VLWE+A+
Sbjct: 207 MSPESLKDGVFTTYS-----DVWSFGVVLWEIAT 235
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 49/287 (17%)
Query: 123 GRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQ---EIFKLPHMEHDNILRYIGAEKRGE 179
G FG V+KA+ K +V ++ K + E EI L +H NI++ + A
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF---- 76
Query: 180 SIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHLHEEILPNKADS 236
W++ + G++ D + + +T Q+ + L +LH+ NK
Sbjct: 77 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHD----NK--- 128
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEG 296
+ HRD K+ N+L D +ADFG++ +GT +MAPEV+
Sbjct: 129 ----IIHRDLKAGNILFTLDGDIKLADFGVSAK-NTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 297 AINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAV- 355
+ R + D+++ + L E+A + PP H L M+ +
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEMA----EIEPP--------------HHELNPMRVLLK 225
Query: 356 VHKKLRPTL--PETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
+ K PTL P W + D +++C + + +AR + S +++
Sbjct: 226 IAKSEPPTLAQPSRWSSN-----FKDFLKKCLEKNVDARWTTSQLLQ 267
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 106 KLYFGLSYAKNGCLLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 153
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT-----E 208
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 209 KSASKSSDLWALGCIIYQLVA 229
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKFKN-------ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDN 167
+G FG V A+ E V V + +++D + + SE E+ K+ +H N
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKN 102
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ +T++
Sbjct: 103 IINLLGACTQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L +++G+ +L + HRD + NVL+ + IADFGLA
Sbjct: 159 LVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
T ++MAPE L F R + D+++ +++WE+ + SP
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPY 260
Query: 331 PG 332
PG
Sbjct: 261 PG 262
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKFKN-------ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDN 167
+G FG V A+ E V V + +++D + + SE E+ K+ +H N
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKN 102
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ +T++
Sbjct: 103 IINLLGACTQDGPL----YVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L +++G+ +L + HRD + NVL+ + IADFGLA
Sbjct: 159 LVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
T ++MAPE L F R + D+++ +++WE+ + SP
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPY 260
Query: 331 PG 332
PG
Sbjct: 261 PG 262
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKFKN-------ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDN 167
+G FG V A+ E V V + +++D + + SE E+ K+ +H N
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKN 102
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ +T++
Sbjct: 103 IINLLGACTQDGPL----YVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L +++G+ +L + HRD + NVL+ + IADFGLA
Sbjct: 159 LVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
T ++MAPE L F R + D+++ +++WE+ + SP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPY 260
Query: 331 PG 332
PG
Sbjct: 261 PG 262
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 111 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 158
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 213
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 214 KSACKSSDLWALGCIIYQLVA 234
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 40 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 100 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 154
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ S+ + DFGL+ E + G++
Sbjct: 155 LESK-----------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 203
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 204 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 233
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 38/238 (15%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFK------NENVAVKIFLMQDKQSWQS-EQEIFKLPHME 164
R ++ + +G FG+V ++ E VAVK ++ + E+EI L ++
Sbjct: 13 RHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 72
Query: 165 HDNILRYIG----AEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
HDNI++Y G A +R LI + GSL ++L+ + + +L + +
Sbjct: 73 HDNIVKYKGVCYSAGRRN------LKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI 126
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
KG+ +L + HRD + N+L++++ I DFGL + K
Sbjct: 127 CKGMEYLGTK-----------RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 279 TH--GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
G+ Y APE L + FS + D+++ +VL+EL + PP E+
Sbjct: 176 VKEPGESPIFWY-APESLTES-KFSVAS----DVWSFGVVLYELFTYIEKSKSPPAEF 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 106 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 153
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 208
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 209 KSACKSSDLWALGCIIYQLVA 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 82 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 129
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 184
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 185 KSACKSSDLWALGCIIYQLVA 205
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 107 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 154
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 209
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 210 KSACKSSDLWALGCIIYQLVA 230
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +L ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLSQVIQMEL-DHERMSYLLYQMLVGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 15 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 75 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 129
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ S+ + DFGL+ E + G++
Sbjct: 130 LESK-----------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 178
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 179 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 81 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 128
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 183
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 184 KSACKSSDLWALGCIIYQLVA 204
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAVL-DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTP 94
Query: 178 GESIH--TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+++ + +L+ + +L ++ + E++ + M G+ HLH
Sbjct: 95 QKTLEEFQDVYLVMELMD-ANLXQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDXTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 103 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 150
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT-----E 205
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 206 KSACKSSDLWALGCIIYQLVA 226
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 69 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 123
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ S+ + DFGL+ E + G++
Sbjct: 124 LESK-----------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 172
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 173 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 202
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 77 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ S+ + DFGL+ E + G++
Sbjct: 132 LESK-----------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 180
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 181 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 210
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 109 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 156
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 211
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 212 KSACKSSDLWALGCIIYQLVA 232
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 104 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 151
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 206
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 207 KSACKSSDLWALGCIIYQLVA 227
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 14 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 74 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 128
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ S+ + DFGL+ E + G++
Sbjct: 129 LESK-----------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 177
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 178 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 72 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ S+ + DFGL+ E + G++
Sbjct: 127 LESK-----------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 176 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 205
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 72 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 126
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ S+ + DFGL+ E + G++
Sbjct: 127 LESK-----------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 176 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 205
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 106 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 153
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 208
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 209 KSACKSSDLWALGCIIYQLVA 229
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 78 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 128
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IADFG + P GT Y+ PE+
Sbjct: 129 ------RVIHRDIKPENLLLGSAGELKIADFGWSC----HAPSSRRTTLSGTLDYLPPEM 178
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 179 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 208
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 104 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 151
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 206
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 207 KSACKSSDLWALGCIIYQLVA 227
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 104 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 151
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 206
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 207 KSACKSSDLWALGCIIYQLVA 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 106 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 153
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 208
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 209 KSACKSSDLWALGCIIYQLVA 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 27 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 84
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ E +A ++ + EI
Sbjct: 85 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRY 288
A HRD + N ++ D T I DFG+ ++E G + R+
Sbjct: 141 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 199
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
M+PE L+ + + D+++ +VLWE+A+
Sbjct: 200 MSPESLKDGVFTTYS-----DVWSFGVVLWEIAT 228
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 19 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 78
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 79 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 129
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IA+FG ++ P GT Y+ PE+
Sbjct: 130 ------RVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLPPEM 179
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 180 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 22/140 (15%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQ-LCRIALSMSKGLMHLHEEILPNKADSYKPAVA 242
E + + + GSL LK EQ L ++++++ KGL +L E K +
Sbjct: 81 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE----------KHKIM 130
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ-VGTRRYMAPEVLEGAINFS 301
HRD K +N+L+ S + DFG++ G+ + + VGTR YM+PE L+G ++S
Sbjct: 131 HRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDEMANEFVGTRSYMSPERLQGT-HYS 184
Query: 302 RDAFLRIDMYACALVLWELA 321
++ D+++ L L E+A
Sbjct: 185 ----VQSDIWSMGLSLVEMA 200
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 106 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 153
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 208
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 209 KSACKSSDLWALGCIIYQLVA 229
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 103 SPPSPQQGCRSIQLVEVKAQGRFGAV--WKAKFKNENVAVKI----FLMQDKQSWQSEQE 156
SP P Q C ++ E G FG V W + E VA+K ++++ W E +
Sbjct: 6 SPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQ 65
Query: 157 IFKLPHMEHDNIL--RYIGAEKRGESIHTEFWLITAYHERGSLCDFLK-----CNIVTWE 209
I K + H N++ R + + + + L Y E G L +L C + E
Sbjct: 66 IMK--KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK--E 121
Query: 210 QLCRIALS-MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLK---SDLTAAIADFG 265
R LS +S L +LHE + HRD K N++L+ L I D G
Sbjct: 122 GPIRTLLSDISSALRYLHEN-----------RIIHRDLKPENIVLQPGPQRLIHKIIDLG 170
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
A + G+ C + VGT +Y+APE+LE
Sbjct: 171 YAKELDQGELCTEF---VGTLQYLAPELLE 197
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 21 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 78
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ E +A ++ + EI
Sbjct: 79 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRY 288
A HRD + N ++ D T I DFG+ ++E G + R+
Sbjct: 135 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 193
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
M+PE L+ + + D+++ +VLWE+A+
Sbjct: 194 MSPESLKDGVFTTYS-----DVWSFGVVLWEIAT 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKFKN-------ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDN 167
+G FG V A+ E V V + +++D + + SE E+ K+ +H N
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG-KHKN 102
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ +T++
Sbjct: 103 IINLLGACTQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L +++G+ +L + HRD + NVL+ + IADFGLA
Sbjct: 159 LVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
T ++MAPE L F R + D+++ +++WE+ + SP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPY 260
Query: 331 PG 332
PG
Sbjct: 261 PG 262
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 103 SPPSPQQGCRSIQLVEVKAQGRFGAV--WKAKFKNENVAVKI----FLMQDKQSWQSEQE 156
SP P Q C ++ E G FG V W + E VA+K ++++ W E +
Sbjct: 5 SPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQ 64
Query: 157 IFKLPHMEHDNIL--RYIGAEKRGESIHTEFWLITAYHERGSLCDFLK-----CNIVTWE 209
I K + H N++ R + + + + L Y E G L +L C + E
Sbjct: 65 IMK--KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLK--E 120
Query: 210 QLCRIALS-MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLK---SDLTAAIADFG 265
R LS +S L +LHE + HRD K N++L+ L I D G
Sbjct: 121 GPIRTLLSDISSALRYLHEN-----------RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
A + G+ C + VGT +Y+APE+LE
Sbjct: 170 YAKELDQGELCTEF---VGTLQYLAPELLE 196
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 25 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 82
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ E +A ++ + EI
Sbjct: 83 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 138
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRY 288
A HRD + N ++ D T I DFG+ ++E G + R+
Sbjct: 139 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 197
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
M+PE L+ + + D+++ +VLWE+A+
Sbjct: 198 MSPESLKDGVFTTYS-----DVWSFGVVLWEIAT 226
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 28 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 85
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ E +A ++ + EI
Sbjct: 86 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRY 288
A HRD + N ++ D T I DFG+ ++E G + R+
Sbjct: 142 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 200
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
M+PE L+ + + D+++ +VLWE+A+
Sbjct: 201 MSPESLKDGVFTTYS-----DVWSFGVVLWEIAT 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 27 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 84
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ E +A ++ + EI
Sbjct: 85 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRY 288
A HRD + N ++ D T I DFG+ ++E G + R+
Sbjct: 141 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 199
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
M+PE L+ + + D+++ +VLWE+A+
Sbjct: 200 MSPESLKDGVFTTYS-----DVWSFGVVLWEIAT 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 88 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 135
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 190
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 191 KSACKSSDLWALGCIIYQLVA 211
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 18/121 (14%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+++ E L +I L+ K L HL E + + HRD K +N+LL + D
Sbjct: 120 DVIPEEILGKITLATVKALNHLKENL----------KIIHRDIKPSNILLDRSGNIKLCD 169
Query: 264 FGLA-LLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAF-LRIDMYACALVLWELA 321
FG++ L + D G R YMAPE ++ + SR + +R D+++ + L+ELA
Sbjct: 170 FGISGQLVDSIAKTRDA----GCRPYMAPERIDPSA--SRQGYDVRSDVWSLGITLYELA 223
Query: 322 S 322
+
Sbjct: 224 T 224
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAYHERGS-LCDFLKCNIVTW 208
++ +E+ L HM+H+N++ + S+ + +L+T H G+ L + +K +T
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT--HLMGADLNNIVKSQKLTD 124
Query: 209 EQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL 268
+ + + + +GL ++H AD + HRD K +N+ + D I DFGL
Sbjct: 125 DHVQFLIYQILRGLKYIH------SAD-----IIHRDLKPSNLAVNEDSELKILDFGLC- 172
Query: 269 LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ G V TR Y APE++ +++++ +D+++ ++ EL +
Sbjct: 173 ----RHTDDEMTGYVATRWYRAPEIMLNWMHYNQ----TVDIWSVGCIMAELLT 218
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 121 AQGRFGAVWKAKFKNEN--VAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+G+FG V+ A+ K +A+K+ L + Q +E+ H+ H NILR G
Sbjct: 20 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 79
Query: 175 EKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
T +LI Y G++ + K + ++ ++ L + H +
Sbjct: 80 FHDA----TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----- 130
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
V HRD K N+LL S IA+FG ++ P GT Y+ PE+
Sbjct: 131 ------RVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLPPEM 180
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+EG ++ ++D+++ ++ +E V PP E
Sbjct: 181 IEGRMHDE-----KVDLWSLGVLCYEFL-----VGKPPFE 210
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKFKN-------ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDN 167
+G FG V A+ E V V + +++D + + SE E+ K+ +H N
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKN 102
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ +T++
Sbjct: 103 IIHLLGACTQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L +++G+ +L + HRD + NVL+ + IADFGLA
Sbjct: 159 LVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
T ++MAPE L F R + D+++ +++WE+ + SP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPY 260
Query: 331 PG 332
PG
Sbjct: 261 PG 262
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 19/141 (13%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQLCR--IALSMSKGLMHLHEEILPNKADSYKPAV 241
+ + +Y + G L +++ I ++++ C + L +LH + +
Sbjct: 103 KLYFGLSYAKNGELLKYIR-KIGSFDETCTRFYTAEIVSALEYLHGK-----------GI 150
Query: 242 AHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFS 301
HRD K N+LL D+ I DFG A + P + VGT +Y++PE+L
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT-----E 205
Query: 302 RDAFLRIDMYACALVLWELAS 322
+ A D++A ++++L +
Sbjct: 206 KSACKSSDLWALGCIIYQLVA 226
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKFKN-------ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDN 167
+G FG V A+ E V V + +++D + + SE E+ K+ +H N
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKN 102
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ +T++
Sbjct: 103 IITLLGACTQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L +++G+ +L + HRD + NVL+ + IADFGLA
Sbjct: 159 LVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMKIADFGLARDI 207
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
T ++MAPE L F R + D+++ +++WE+ + SP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPY 260
Query: 331 PG 332
PG
Sbjct: 261 PG 262
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 85/212 (40%), Gaps = 33/212 (15%)
Query: 115 QLVEVKAQGRFGA--VWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYI 172
+LV+ G FG + + K NE VAVK +K ++EI + H NI+R+
Sbjct: 22 ELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF- 80
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
K T ++ Y G L +E++C ++++
Sbjct: 81 ---KEVILTPTHLAIVMEYASGGEL----------FERICNAGRFSEDEARFFFQQLISG 127
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLT--AAIADFGLALLFEPGKPCGDTHGQ----VGTR 286
+ ++ VAHRD K N LL IADFG + H Q VGT
Sbjct: 128 VSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYS-------KASVLHSQPKSAVGTP 180
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLW 318
Y+APEVL + A D+++C + L+
Sbjct: 181 AYIAPEVLLKKEYDGKVA----DVWSCGVTLY 208
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 100/242 (41%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKFKN-------ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDN 167
+G FG V A+ E V V + +++D + + SE E+ K+ +H N
Sbjct: 44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKN 102
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ +T++
Sbjct: 103 IINLLGACTQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L +++G+ +L + HRD + NVL+ + IADFGLA
Sbjct: 159 LVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMRIADFGLARDI 207
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
T ++MAPE L F R + D+++ +++WE+ + SP
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPY 260
Query: 331 PG 332
PG
Sbjct: 261 PG 262
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 22/213 (10%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 19 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 76
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ E +A ++ + EI
Sbjct: 77 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 132
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYM 289
A HRD + N ++ D T I DFG+ + R+M
Sbjct: 133 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 192
Query: 290 APEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+PE L+ + + D+++ +VLWE+A+
Sbjct: 193 SPESLKDGVFTTYS-----DVWSFGVVLWEIAT 220
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 24/214 (11%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 56 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 113
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ E +A ++ + EI
Sbjct: 114 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 169
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRY 288
A HRD + N ++ D T I DFG+ ++E G + R+
Sbjct: 170 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 228
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
M+PE L+ + + D+++ +VLWE+A+
Sbjct: 229 MSPESLKDGVFTTYS-----DVWSFGVVLWEIAT 257
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 22/213 (10%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 28 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 85
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ E +A ++ + EI
Sbjct: 86 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 141
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYM 289
A HRD + N ++ D T I DFG+ + R+M
Sbjct: 142 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 201
Query: 290 APEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+PE L+ + + D+++ +VLWE+A+
Sbjct: 202 SPESLKDGVFTTYS-----DVWSFGVVLWEIAT 229
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA-LLFEPGKPCGDTHGQVGTRRYMAPEVL 294
S++ + HRD K N+L+ + + DFG+A + + G T +GT +Y++PE
Sbjct: 132 SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 295 EGAINFSRDAFLRIDMYACALVLWEL 320
G S DA R D+Y+ VL+E+
Sbjct: 192 RGD---SVDA--RSDVYSLGCVLYEV 212
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 24/191 (12%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIG 173
++++V +G FG V K KN A K+F M+ W+ + E ++L G
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKN---ADKVFAMKILNKWEMLKRAETACFREERDVL-VNG 131
Query: 174 AEKRGESIHTEF------WLITAYHERGSLCDFL-KCNIVTWEQLCRIALSMSKGLMHLH 226
K ++H F +L+ Y+ G L L K E++ R L+
Sbjct: 132 DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLA--------- 182
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGT 285
E++ ++ HRD K +N+L+ + +ADFG L L E G + VGT
Sbjct: 183 -EMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV--QSSVAVGT 239
Query: 286 RRYMAPEVLEG 296
Y++PE+L+
Sbjct: 240 PDYISPEILQA 250
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 23/212 (10%)
Query: 117 VEVKAQGRFGAVWKAKF----KNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYI 172
V+V G FG V+K + +N + V I ++++ S ++ +EI ++ Y+
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSMSKGLMHLHEEIL 230
+ G + + L+T G L D ++ N + + L + ++KG+ +L + L
Sbjct: 82 -SRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRL 140
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
HRD + NVL+KS I DFGLA L + + G ++MA
Sbjct: 141 -----------VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMA 189
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
E + R + D+++ + +WEL +
Sbjct: 190 LESI-----LRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 452 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ S+ + DFGL+ E + G++
Sbjct: 507 LESK-----------RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 556 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 585
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 35/217 (16%)
Query: 115 QLVEVKAQGRFGAVWK--AKFKNENVAVKI-----FLMQDKQSWQSEQEIFKLPHMEHDN 167
QL E +G F V + K + A KI +D Q + E I +L ++H N
Sbjct: 34 QLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRL--LKHPN 91
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHE 227
I+R + + F L+T G L + +IV E S H
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTG----GELFE----DIVAREYYSEADAS------HCIH 137
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCGDTHGQVG 284
+IL + ++ + HRD K N+LL S A +ADFGLA+ + + G G
Sbjct: 138 QILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAW--FGFAG 195
Query: 285 TRRYMAPEVLEGAINFSRDAFLR-IDMYACALVLWEL 320
T Y++PEVL +D + + +D++AC ++L+ L
Sbjct: 196 TPGYLSPEVLR------KDPYGKPVDIWACGVILYIL 226
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +L ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLSQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 112/290 (38%), Gaps = 42/290 (14%)
Query: 117 VEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGA 174
+ V QG FG V KA+ + A+K +++ E+ L + H ++RY A
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 175 --EKR-------GESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLM 223
E+R + ++ Y E +L D + + + + R+ + + L
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA---------LLFE--- 271
++H + + HR+ K N+ + I DFGLA L +
Sbjct: 131 YIHSQ-----------GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 272 -PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
PG T +GT Y+A EVL+G +++ +ID Y+ ++ +E S+
Sbjct: 180 LPGSSDNLTSA-IGTAXYVATEVLDGTGHYNE----KIDXYSLGIIFFEXIYPFSTGXER 234
Query: 331 PGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
+ S + P +D + V K +R + + G L ++
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNS 284
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 43/245 (17%)
Query: 100 HPTSPPSPQQGCRSI------QLVEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQ 149
H S +P Q I + ++V G FG V+K + E VKI + +++
Sbjct: 3 HMASGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 62
Query: 150 SWQSEQEI----FKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---K 202
S ++ +EI + + +++ ++ R +G + + LIT G L D++ K
Sbjct: 63 SPKANKEILDEAYVMASVDNPHVCRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHK 117
Query: 203 CNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIA 262
NI + + L + ++KG+ +L + L HRD + NVL+K+ I
Sbjct: 118 DNIGS-QYLLNWCVQIAKGMNYLEDRRL-----------VHRDLAARNVLVKTPQHVKIT 165
Query: 263 DFGLALLFEPGKPCGDTHGQVGTR--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
DFGLA L G + H + G ++MA E + R + D+++ + +WEL
Sbjct: 166 DFGLAKLL--GAEEKEYHAEGGKVPIKWMALESI-----LHRIYTHQSDVWSYGVTVWEL 218
Query: 321 ASRCS 325
+ S
Sbjct: 219 MTFGS 223
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 52/247 (21%)
Query: 109 QGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQ------SEQEIFKLPH 162
+GC Q+V +A G + K K K E V V + +++D + + SE E+ K+
Sbjct: 91 EGCFG-QVVMAEAVG----IDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 144
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------I 205
+H NI+ +GA + + ++I Y +G+L ++L+
Sbjct: 145 -KHKNIINLLGACTQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 206 VTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
+T++ L +++G+ +L + HRD + NVL+ + IADFG
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMKIADFG 248
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
LA T ++MAPE L F R + D+++ +++WE+ +
Sbjct: 249 LARDINNIDYYKKTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG 303
Query: 326 SVSPPPG 332
SP PG
Sbjct: 304 --SPYPG 308
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 28/192 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQ----------DKQSWQSEQEIFKLPHM 163
+L+ V +G +G V++ + KIF M+ K + ++ E L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 164 EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL-KCNIVTWEQLCRIALSMSKGL 222
+H I+ I A + G + +LI Y G L L + I + C +S L
Sbjct: 79 KHPFIVDLIYAFQTG----GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ 282
HLH++ + +RD K N++L + DFGL E TH
Sbjct: 135 GHLHQK-----------GIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTF 181
Query: 283 VGTRRYMAPEVL 294
GT YMAPE+L
Sbjct: 182 CGTIEYMAPEIL 193
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 78/192 (40%), Gaps = 28/192 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQ----------DKQSWQSEQEIFKLPHM 163
+L+ V +G +G V++ + KIF M+ K + ++ E L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 164 EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL-KCNIVTWEQLCRIALSMSKGL 222
+H I+ I A + G + +LI Y G L L + I + C +S L
Sbjct: 79 KHPFIVDLIYAFQTG----GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ 282
HLH++ + +RD K N++L + DFGL E TH
Sbjct: 135 GHLHQK-----------GIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXF 181
Query: 283 VGTRRYMAPEVL 294
GT YMAPE+L
Sbjct: 182 CGTIEYMAPEIL 193
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 46/220 (20%)
Query: 136 ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLIT 189
E V V + +++D + + SE E+ K+ +H NI+ +GA + + ++I
Sbjct: 53 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKNIINLLGACTQDGPL----YVIV 107
Query: 190 AYHERGSLCDFLKCN-----------------IVTWEQLCRIALSMSKGLMHLHEEILPN 232
Y +G+L ++L+ +T++ L +++G+ +L +
Sbjct: 108 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---- 163
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
HRD + NVL+ + IADFGLA T ++MAPE
Sbjct: 164 -------KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 216
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L F R + D+++ +++WE+ + SP PG
Sbjct: 217 AL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPYPG 249
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 46/220 (20%)
Query: 136 ENVAVKIFLMQDKQSWQ------SEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLIT 189
E V V + +++D + + SE E+ K+ +H NI+ +GA + + ++I
Sbjct: 55 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KHKNIINLLGACTQDGPL----YVIV 109
Query: 190 AYHERGSLCDFLKCN-----------------IVTWEQLCRIALSMSKGLMHLHEEILPN 232
Y +G+L ++L+ +T++ L +++G+ +L +
Sbjct: 110 EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---- 165
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
HRD + NVL+ + IADFGLA T ++MAPE
Sbjct: 166 -------KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPE 218
Query: 293 VLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPG 332
L F R + D+++ +++WE+ + SP PG
Sbjct: 219 AL-----FDRVYTHQSDVWSFGVLMWEIFTLGG--SPYPG 251
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 52/247 (21%)
Query: 109 QGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQ------SEQEIFKLPH 162
+GC Q+V +A G + K K K E V V + +++D + + SE E+ K+
Sbjct: 37 EGCFG-QVVMAEAVG----IDKDKPK-EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 90
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------I 205
+H NI+ +GA + + ++I Y +G+L ++L+
Sbjct: 91 -KHKNIINLLGACTQDGPL----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 206 VTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
+T++ L +++G+ +L + HRD + NVL+ + IADFG
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQ-----------KCIHRDLAARNVLVTENNVMKIADFG 194
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
LA T ++MAPE L F R + D+++ +++WE+ +
Sbjct: 195 LARDINNIDYYKKTTNGRLPVKWMAPEAL-----FDRVYTHQSDVWSFGVLMWEIFTLGG 249
Query: 326 SVSPPPG 332
SP PG
Sbjct: 250 --SPYPG 254
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 137 NVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIH--TEFWLITAY 191
NVAVK + ++ +E+ L + H NI+ + +++ + +L+
Sbjct: 49 NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 108
Query: 192 HERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNV 251
+ +LC + + E++ + M G+ HLH + HRD K +N+
Sbjct: 109 MD-ANLCQVIHMEL-DHERMSYLLYQMLCGIKHLH-----------SAGIIHRDLKPSNI 155
Query: 252 LLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMY 311
++KSD T I DFGLA V TR Y APEV+ G + + + +D++
Sbjct: 156 VVKSDCTLKILDFGLA---RTASTNFMMTPYVVTRYYRAPEVILG-MGYKEN----VDIW 207
Query: 312 ACALVLWELA 321
+ ++ EL
Sbjct: 208 SVGCIMGELV 217
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 21 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 78
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ E +A ++ + EI
Sbjct: 79 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 134
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRY 288
A HRD + N + D T I DFG+ ++E G + R+
Sbjct: 135 ADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 193
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
M+PE L+ + + D+++ +VLWE+A+
Sbjct: 194 MSPESLKDGVFTTYS-----DVWSFGVVLWEIAT 222
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 34 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 91
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ +A ++ + EI
Sbjct: 92 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 147
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRY 288
A HRD + N ++ D T I DFG+ ++E G + R+
Sbjct: 148 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 206
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
M+PE L+ + + D+++ +VLWE+A+
Sbjct: 207 MSPESLKDGVFTTYS-----DVWSFGVVLWEIAT 235
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 48/266 (18%)
Query: 89 SYFNPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAK---FKNENVAVKIFLM 145
SY PT P+ P+ ++Q + G FG V +A E+ +K+ +
Sbjct: 18 SYTFIDPTQLPYNEKWEFPRN---NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 74
Query: 146 QDKQSWQSEQ------EIFKLPHM-EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLC 198
K + +++ E+ + H+ +H+NI+ +GA G + +IT Y G L
Sbjct: 75 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV----LVITEYCCYGDLL 130
Query: 199 DFLKCNIVTWEQLCRIALSMSKG-------LMHLHEEILPNKADSYKPAVAHRDFKSNNV 251
+FL+ + L G L+H ++ A HRD + NV
Sbjct: 131 NFLR-------RKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 183
Query: 252 LLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRR----YMAPEVLEGAINFSRDAFL 306
LL + A I DFGLA D++ V G R +MAPE + F +
Sbjct: 184 LLTNGHVAKIGDFGLAR-----DIMNDSNYIVKGNARLPVKWMAPESI-----FDCVYTV 233
Query: 307 RIDMYACALVLWELASRCSSVSPPPG 332
+ D+++ ++LWE+ S ++P PG
Sbjct: 234 QSDVWSYGILLWEIFSL--GLNPYPG 257
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 18/122 (14%)
Query: 202 KCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAI 261
K + + L +IA+S+ K L HLH ++ +V HRD K +NVL+ + +
Sbjct: 102 KGQTIPEDILGKIAVSIVKALEHLHSKL----------SVIHRDVKPSNVLINALGQVKM 151
Query: 262 ADFGLALLFEPGKPCGDTHGQV--GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
DFG++ G D + G + YMAPE + +N + ++ D+++ + + E
Sbjct: 152 CDFGIS-----GYLVDDVAKDIDAGCKPYMAPERINPELN-QKGYSVKSDIWSLGITMIE 205
Query: 320 LA 321
LA
Sbjct: 206 LA 207
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +L ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLSQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDATLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 80 CRLLGI-----CLTSTVQLITQLMPFGXLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 133
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 180
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 181 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 111/266 (41%), Gaps = 48/266 (18%)
Query: 89 SYFNPVPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAK---FKNENVAVKIFLM 145
SY PT P+ P+ ++Q + G FG V +A E+ +K+ +
Sbjct: 26 SYTFIDPTQLPYNEKWEFPRN---NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 146 QDKQSWQSEQ------EIFKLPHM-EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLC 198
K + +++ E+ + H+ +H+NI+ +GA G + +IT Y G L
Sbjct: 83 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV----LVITEYCCYGDLL 138
Query: 199 DFLKCNIVTWEQLCRIALSMSKG-------LMHLHEEILPNKADSYKPAVAHRDFKSNNV 251
+FL+ + L G L+H ++ A HRD + NV
Sbjct: 139 NFLR-------RKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 191
Query: 252 LLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRR----YMAPEVLEGAINFSRDAFL 306
LL + A I DFGLA D++ V G R +MAPE + F +
Sbjct: 192 LLTNGHVAKIGDFGLAR-----DIMNDSNYIVKGNARLPVKWMAPESI-----FDCVYTV 241
Query: 307 RIDMYACALVLWELASRCSSVSPPPG 332
+ D+++ ++LWE+ S ++P PG
Sbjct: 242 QSDVWSYGILLWEIFSL--GLNPYPG 265
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 184 EFWLITAYHERGSLCDFLKCNIVTWEQ-LCRIALSMSKGLMHLHEEILPNKADSYKPAVA 242
E + + + GSL LK EQ L ++++++ KGL +L E K +
Sbjct: 97 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE----------KHKIM 146
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD-THGQVGTRRYMAPEVLEGAINFS 301
HRD K +N+L+ S + DFG++ G+ + VGTR YM+PE L+G ++S
Sbjct: 147 HRDVKPSNILVNSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGT-HYS 200
Query: 302 RDAFLRIDMYACALVLWELA 321
++ D+++ L L E+A
Sbjct: 201 ----VQSDIWSMGLSLVEMA 216
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 112/294 (38%), Gaps = 53/294 (18%)
Query: 116 LVEVKAQGRFGAVWKAKFKNENVAVKIFLMQD------KQSWQSEQEIFKLPHMEHDNIL 169
L E +G FG V+ + + +N V + ++ K + E I K H NI+
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK--QYSHPNIV 175
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMHLHE 227
R IG + + I+ L+ G FL+ + + L ++ + G+ +L
Sbjct: 176 RLIGVCTQKQPIYIVMELVQG----GDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
+ HRD + N L+ I+DFG++ G + +
Sbjct: 232 K-----------CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK 280
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
+ APE A+N+ R + D+++ ++LWE FS +P+
Sbjct: 281 WTAPE----ALNYGRYSS-ESDVWSFGILLWE-----------------TFSLGASPYPN 318
Query: 348 LEDMQ-EAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
L + Q V K R PE A+ ME+CW ++ R S S + +
Sbjct: 319 LSNQQTREFVEKGGRLPCPELCPD-----AVFRLMEQCWAYEPGQRPSFSTIYQ 367
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIF---LMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKR 177
AQG A + A + NVA+K + ++ +E+ + + H NI+ +
Sbjct: 36 AQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 94
Query: 178 GESIHTEFWLITAYHE--RGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKAD 235
+S+ EF + E +L ++ + E++ + M G+ HLH
Sbjct: 95 QKSLE-EFQDVYIVMELMDANLSQVIQMEL-DHERMSYLLYQMLCGIKHLHS-------- 144
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ---VGTRRYMAPE 292
+ HRD K +N+++KSD T I DFGLA + G + V TR Y APE
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDCTLKILDFGLA------RTAGTSFMMTPYVVTRYYRAPE 195
Query: 293 VLEG 296
V+ G
Sbjct: 196 VILG 199
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 147 DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL----- 201
+KQ SE + + ++H NI+RY ++ + +T +++ Y E G L +
Sbjct: 48 EKQMLVSEVNLLR--ELKHPNIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTK 103
Query: 202 KCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAI 261
+ + E + R+ ++ L H ++D V HRD K NV L +
Sbjct: 104 ERQYLDEEFVLRVMTQLTLALKECHR-----RSDG-GHTVLHRDLKPANVFLDGKQNVKL 157
Query: 262 ADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
DFGLA + T VGT YM+PE + ++++ + D+++ +L+EL
Sbjct: 158 GDFGLARILNHDTSFAKTF--VGTPYYMSPEQM-NRMSYNEKS----DIWSLGCLLYEL 209
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 12 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 72 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ + + DFGL+ E + G++
Sbjct: 127 LESK-----------RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 176 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 205
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA-LLFEPGKPCGDTHGQVGTRRYMAPEVL 294
S++ + HRD K N+++ + + DFG+A + + G T +GT +Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 295 EGAINFSRDAFLRIDMYACALVLWEL 320
G S DA R D+Y+ VL+E+
Sbjct: 192 RGD---SVDA--RSDVYSLGCVLYEV 212
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 121 AQGRFGAVW----KAKFKNE---NVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDNIL 169
QG FG V+ K K+E VA+K M+++ + +E + K + H ++
Sbjct: 24 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH--VV 81
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
R +G +G+ L+T RG L +L+ +A ++ + EI
Sbjct: 82 RLLGVVSQGQPTLVIMELMT----RGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 137
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRY 288
A HRD + N ++ D T I DFG+ ++E G + R+
Sbjct: 138 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV-RW 196
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
M+PE L+ + + D+++ +VLWE+A+
Sbjct: 197 MSPESLKDGVFTTYS-----DVWSFGVVLWEIAT 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA-LLFEPGKPCGDTHGQVGTRRYMAPEVL 294
S++ + HRD K N+++ + + DFG+A + + G T +GT +Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 295 EGAINFSRDAFLRIDMYACALVLWEL 320
G S DA R D+Y+ VL+E+
Sbjct: 192 RGD---SVDA--RSDVYSLGCVLYEV 212
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 28/217 (12%)
Query: 118 EVKAQGRFGA-VWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEK 176
+V G G V++ F N +VAVK L + E ++ + EH N++RY EK
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESD-EHPNVIRYFCTEK 88
Query: 177 RGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIAL--SMSKGLMHLHEEILPNKA 234
+ + L A +L ++++ L I L + GL HLH
Sbjct: 89 DRQFQYIAIELCAA-----TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH-------- 135
Query: 235 DSYKPAVAHRDFKSNNVLLK-----SDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
+ HRD K +N+L+ + A I+DFGL G+ V GT +
Sbjct: 136 ---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
+APE+L + + + +D+++ V + + S S
Sbjct: 193 IAPEML--SEDCKENPTYTVDIFSAGCVFYYVISEGS 227
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 42/227 (18%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIF-----LMQDKQSWQSEQEIFKLPHMEHDN 167
+++E G +G V A+ + VA+K ++ + + E +I K H +HDN
Sbjct: 58 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK--HFKHDN 115
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---------VTWEQLCRIALSM 218
I+ I R + EF + + D ++ ++ +T E + +
Sbjct: 116 IIA-IKDILRPTVPYGEFKSVYV------VLDLMESDLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA--LLFEPGKPC 276
+GL ++H V HRD K +N+L+ + I DFG+A L P +
Sbjct: 169 LRGLKYMHSA-----------QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 217
Query: 277 GDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
V TR Y APE++ +++ ID+++ + E+ +R
Sbjct: 218 YFMTEYVATRWYRAPELMLSLHEYTQ----AIDLWSVGCIFGEMLAR 260
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA-LLFEPGKPCGDTHGQVGTRRYMAPEVL 294
S++ + HRD K N+++ + + DFG+A + + G T +GT +Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 295 EGAINFSRDAFLRIDMYACALVLWEL 320
G S DA R D+Y+ VL+E+
Sbjct: 192 RGD---SVDA--RSDVYSLGCVLYEV 212
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 55/243 (22%)
Query: 121 AQGRFGAVWKAKF---------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDN 167
+G FG V A+ + VAVK+ +D SE E+ K+ +H N
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKN 95
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ ++ +
Sbjct: 96 IINLLGACTQDGPL----YVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-L 269
L A +++G+ +L + HRD + NVL+ D IADFGLA +
Sbjct: 152 LVSCAYQVARGMEYLASK-----------KCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSP 329
T+G++ ++MAPE L F R + D+++ ++LWE+ + SP
Sbjct: 201 HHIDXXKKTTNGRLPV-KWMAPEAL-----FDRIYTHQSDVWSFGVLLWEIFTLGG--SP 252
Query: 330 PPG 332
PG
Sbjct: 253 YPG 255
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA-LLFEPGKPCGDTHGQVGTRRYMAPEVL 294
S++ + HRD K N+++ + + DFG+A + + G T +GT +Y++PE
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 295 EGAINFSRDAFLRIDMYACALVLWEL 320
G S DA R D+Y+ VL+E+
Sbjct: 192 RGD---SVDA--RSDVYSLGCVLYEV 212
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 32/228 (14%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKFKN--ENVAVKIFLMQDKQSWQ-SEQEIFKLPHMEHD 166
G R + L + G G V+ A + + VA+K ++ D QS + + +EI + ++HD
Sbjct: 10 GSRYMDLKPLGCGGN-GLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHD 68
Query: 167 NILRYIGAEKRGESIHTE----------FWLITAYHERGSLCDFLKCNIVTWEQLCRIAL 216
NI++ S T+ +++ Y E L + L+ + E
Sbjct: 69 NIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMY 127
Query: 217 SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS-DLTAAIADFGLALLFEPGKP 275
+ +GL ++H V HRD K N+ + + DL I DFGLA + +P
Sbjct: 128 QLLRGLKYIH-----------SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYS 176
Query: 276 C-GDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
G + T+ Y +P +L N+++ IDM+A + E+ +
Sbjct: 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTK----AIDMWAAGCIFAEMLT 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 82 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 135
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 136 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 182
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 183 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V + G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 27 IKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 87 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 140
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 141 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 187
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 188 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V + G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 20 IKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 80 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 133
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 180
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 181 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 105/247 (42%), Gaps = 49/247 (19%)
Query: 113 SIQLVEVKAQGRFGAVWKAK---FKNENVAVKIFLMQDKQSWQSEQ------EIFKLPHM 163
++Q + G FG V +A E+ +K+ + K + +++ E+ + H+
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 164 -EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW------------EQ 210
+H+NI+ +GA G + +IT Y G L +FL+ EQ
Sbjct: 107 GQHENIVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L S+ L+H ++ A HRD + NVLL + A I DFGLA
Sbjct: 163 LS------SRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-- 214
Query: 271 EPGKPCGDTHGQV-GTRR----YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
D++ V G R +MAPE + F ++ D+++ ++LWE+ S
Sbjct: 215 ---DIMNDSNYIVKGNARLPVKWMAPESI-----FDCVYTVQSDVWSYGILLWEIFSL-- 264
Query: 326 SVSPPPG 332
++P PG
Sbjct: 265 GLNPYPG 271
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 30 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 89
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 90 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 143
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 144 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 190
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 191 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 227
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 45 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 104
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 105 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 158
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 159 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 205
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 206 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 242
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 33/234 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQ---DKQSWQSEQEIFKLPHMEHDNILR 170
+++ E+ +GRFG V+ ++ E VA+++ ++ + Q ++E+ H+N++
Sbjct: 35 LEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVL 93
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEIL 230
++GA + +IT SLC V + +I L ++K + +EI+
Sbjct: 94 FMGACMSPPHLA----IIT------SLCKGRTLYSVVRD--AKIVLDVNK-TRQIAQEIV 140
Query: 231 PNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL---ALLFEPGKPCGDTHGQVGTRR 287
+ + H+D KS NV + I DFGL + + + G+ Q G
Sbjct: 141 KGMGYLHAKGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLC 199
Query: 288 YMAPEVL--------EGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
++APE++ E + FS+ + D++A + +EL +R P E
Sbjct: 200 HLAPEIIRQLSPDTEEDKLPFSKHS----DVFALGTIWYELHAREWPFKTQPAE 249
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 83 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 136
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 137 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 183
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 184 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 80 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 133
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 180
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 181 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 120/295 (40%), Gaps = 57/295 (19%)
Query: 119 VKAQGRFGAVWKAKFKNE-----NVAVK----IFLMQDKQSWQSEQEIFKLPHMEHDNIL 169
V +G FG V+ ++ ++ A+K I MQ +++ E + + + H N+L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMR--GLNHPNVL 85
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKC--NIVTWEQLCRIALSMSKGLMHLHE 227
IG E + ++ Y G L F++ T + L L +++G+ +L E
Sbjct: 86 ALIGIMLPPEGLPH---VLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA---LLFEPGKPCGDTHGQVG 284
+ HRD + N +L T +ADFGLA L E H ++
Sbjct: 143 Q-----------KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGD 344
++ A E L+ F+ + D+++ ++LWEL +R + PP + PF
Sbjct: 192 V-KWTALESLQ-TYRFTTKS----DVWSFGVLLWELLTRGA----PPYRHIDPF------ 235
Query: 345 HPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVV 399
D+ + + P PE +L M++CW+ D R + +V
Sbjct: 236 -----DLTHFLAQGRRLPQ-PEYCPD-----SLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 236 SYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA-LLFEPGKPCGDTHGQVGTRRYMAPEVL 294
S++ + HRD K N+++ + + DFG+A + + G T +GT +Y++PE
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
Query: 295 EGAINFSRDAFLRIDMYACALVLWEL 320
G S DA R D+Y+ VL+E+
Sbjct: 209 RGD---SVDA--RSDVYSLGCVLYEV 229
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 27 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 87 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 140
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 141 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 187
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 188 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 83 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 136
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 137 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 183
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 184 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 112/294 (38%), Gaps = 53/294 (18%)
Query: 116 LVEVKAQGRFGAVWKAKFKNENVAVKIFLMQD------KQSWQSEQEIFKLPHMEHDNIL 169
L E +G FG V+ + + +N V + ++ K + E I K H NI+
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK--QYSHPNIV 175
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN--IVTWEQLCRIALSMSKGLMHLHE 227
R IG + + I+ L+ G FL+ + + L ++ + G+ +L
Sbjct: 176 RLIGVCTQKQPIYIVMELVQG----GDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
+ HRD + N L+ I+DFG++ G + +
Sbjct: 232 K-----------CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK 280
Query: 288 YMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPS 347
+ APE A+N+ R + D+++ ++LWE FS +P+
Sbjct: 281 WTAPE----ALNYGRYSS-ESDVWSFGILLWE-----------------TFSLGASPYPN 318
Query: 348 LEDMQ-EAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
L + Q V K R PE A+ ME+CW ++ R S S + +
Sbjct: 319 LSNQQTREFVEKGGRLPCPELCPD-----AVFRLMEQCWAYEPGQRPSFSTIYQ 367
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 83 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 136
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 137 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 183
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 184 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 16/121 (13%)
Query: 202 KCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAI 261
K + + L +IA+S+ K L HLH ++ +V HRD K +NVL+ + +
Sbjct: 146 KGQTIPEDILGKIAVSIVKALEHLHSKL----------SVIHRDVKPSNVLINALGQVKM 195
Query: 262 ADFGLA-LLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
DFG++ L + D G + YMAPE + +N + ++ D+++ + + EL
Sbjct: 196 CDFGISGYLVDSVAKTIDA----GCKPYMAPERINPELN-QKGYSVKSDIWSLGITMIEL 250
Query: 321 A 321
A
Sbjct: 251 A 251
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 45/198 (22%)
Query: 154 EQEIFKLPHMEHDNILR---YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
E EI L + H I++ + AE +++++ E G L D + N E
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE--------DYYIVLELMEGGELFDKVVGNKRLKEA 114
Query: 211 LCRIAL-SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGL 266
C++ M + +LHE + HRD K NVLL S D I DFG
Sbjct: 115 TCKLYFYQMLLAVQYLHEN-----------GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 267 ALLFEPGKPCGDT---HGQVGTRRYMAPEVL--EGAINFSRDAFLRIDMYACALVLWELA 321
+ K G+T GT Y+APEVL G ++R +D ++ ++L+
Sbjct: 164 S------KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNR----AVDCWSLGVILF--- 210
Query: 322 SRCSSVSPPPGEYRLPFS 339
C S PP E+R S
Sbjct: 211 -ICLSGYPPFSEHRTQVS 227
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 45/198 (22%)
Query: 154 EQEIFKLPHMEHDNILR---YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
E EI L + H I++ + AE +++++ E G L D + N E
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE--------DYYIVLELMEGGELFDKVVGNKRLKEA 114
Query: 211 LCRIAL-SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGL 266
C++ M + +LHE + HRD K NVLL S D I DFG
Sbjct: 115 TCKLYFYQMLLAVQYLHEN-----------GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 267 ALLFEPGKPCGDT---HGQVGTRRYMAPEVL--EGAINFSRDAFLRIDMYACALVLWELA 321
+ K G+T GT Y+APEVL G ++R +D ++ ++L+
Sbjct: 164 S------KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNR----AVDCWSLGVILF--- 210
Query: 322 SRCSSVSPPPGEYRLPFS 339
C S PP E+R S
Sbjct: 211 -ICLSGYPPFSEHRTQVS 227
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 45/198 (22%)
Query: 154 EQEIFKLPHMEHDNILR---YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
E EI L + H I++ + AE +++++ E G L D + N E
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAE--------DYYIVLELMEGGELFDKVVGNKRLKEA 120
Query: 211 LCRIAL-SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGL 266
C++ M + +LHE + HRD K NVLL S D I DFG
Sbjct: 121 TCKLYFYQMLLAVQYLHEN-----------GIIHRDLKPENVLLSSQEEDCLIKITDFGH 169
Query: 267 ALLFEPGKPCGDT---HGQVGTRRYMAPEVL--EGAINFSRDAFLRIDMYACALVLWELA 321
+ K G+T GT Y+APEVL G ++R +D ++ ++L+
Sbjct: 170 S------KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNR----AVDCWSLGVILF--- 216
Query: 322 SRCSSVSPPPGEYRLPFS 339
C S PP E+R S
Sbjct: 217 -ICLSGYPPFSEHRTQVS 233
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 55/243 (22%)
Query: 121 AQGRFGAVWKAKF---------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDN 167
+G FG V A+ + VAVK+ +D SE E+ K+ +H N
Sbjct: 26 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKN 84
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ ++ +
Sbjct: 85 IINLLGACTQDGPL----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-L 269
L A +++G+ +L + HRD + NVL+ D IADFGLA +
Sbjct: 141 LVSCAYQVARGMEYLASK-----------KCIHRDLAARNVLVTEDNVMKIADFGLARDI 189
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSP 329
T+G++ ++MAPE L F R + D+++ ++LWE+ + SP
Sbjct: 190 HHIDYYKKTTNGRLPV-KWMAPEAL-----FDRIYTHQSDVWSFGVLLWEIFTLGG--SP 241
Query: 330 PPG 332
PG
Sbjct: 242 YPG 244
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 45/198 (22%)
Query: 154 EQEIFKLPHMEHDNILR---YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
E EI L + H I++ + AE +++++ E G L D + N E
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAE--------DYYIVLELMEGGELFDKVVGNKRLKEA 113
Query: 211 LCRIAL-SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGL 266
C++ M + +LHE + HRD K NVLL S D I DFG
Sbjct: 114 TCKLYFYQMLLAVQYLHEN-----------GIIHRDLKPENVLLSSQEEDCLIKITDFGH 162
Query: 267 ALLFEPGKPCGDT---HGQVGTRRYMAPEVL--EGAINFSRDAFLRIDMYACALVLWELA 321
+ K G+T GT Y+APEVL G ++R +D ++ ++L+
Sbjct: 163 S------KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNR----AVDCWSLGVILF--- 209
Query: 322 SRCSSVSPPPGEYRLPFS 339
C S PP E+R S
Sbjct: 210 -ICLSGYPPFSEHRTQVS 226
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 55/243 (22%)
Query: 121 AQGRFGAVWKAKF---------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDN 167
+G FG V A+ + VAVK+ +D SE E+ K+ +H N
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKN 95
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ ++ +
Sbjct: 96 IINLLGACTQDGPL----YVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-L 269
L A +++G+ +L + HRD + NVL+ D IADFGLA +
Sbjct: 152 LVSCAYQVARGMEYLASK-----------KCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSP 329
T+G++ ++MAPE L F R + D+++ ++LWE+ + SP
Sbjct: 201 HHIDYYKKTTNGRLPV-KWMAPEAL-----FDRIYTHQSDVWSFGVLLWEIFTLGG--SP 252
Query: 330 PPG 332
PG
Sbjct: 253 YPG 255
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 31/243 (12%)
Query: 115 QLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHM---EHDNILRY 171
++V G FG V+KAK K +++ K + E I ++ + +H I++
Sbjct: 14 EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 73
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHLHEE 228
+GA + W++ + G++ D + + +T Q+ + M + L LH +
Sbjct: 74 LGAYYHD----GKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD K+ NVL+ + +ADFG++ + K +GT +
Sbjct: 129 -----------RIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYW 175
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY---RLPFSAEVGDH 345
MAPEV+ + D+++ + L E+A + PP E R+ D
Sbjct: 176 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMA----QIEPPHHELNPMRVLLKIAKSDP 231
Query: 346 PSL 348
P+L
Sbjct: 232 PTL 234
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 45/198 (22%)
Query: 154 EQEIFKLPHMEHDNILR---YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
E EI L + H I++ + AE +++++ E G L D + N E
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAE--------DYYIVLELMEGGELFDKVVGNKRLKEA 114
Query: 211 LCRIAL-SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGL 266
C++ M + +LHE + HRD K NVLL S D I DFG
Sbjct: 115 TCKLYFYQMLLAVQYLHEN-----------GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163
Query: 267 ALLFEPGKPCGDT---HGQVGTRRYMAPEVL--EGAINFSRDAFLRIDMYACALVLWELA 321
+ K G+T GT Y+APEVL G ++R +D ++ ++L+
Sbjct: 164 S------KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNR----AVDCWSLGVILF--- 210
Query: 322 SRCSSVSPPPGEYRLPFS 339
C S PP E+R S
Sbjct: 211 -ICLSGYPPFSEHRTQVS 227
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 55/243 (22%)
Query: 121 AQGRFGAVWKAKF---------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDN 167
+G FG V A+ + VAVK+ +D SE E+ K+ +H N
Sbjct: 22 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKN 80
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ ++ +
Sbjct: 81 IINLLGACTQDGPL----YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-L 269
L A +++G+ +L + HRD + NVL+ D IADFGLA +
Sbjct: 137 LVSCAYQVARGMEYLASK-----------KCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSP 329
T+G++ ++MAPE L F R + D+++ ++LWE+ + SP
Sbjct: 186 HHIDYYKKTTNGRLPV-KWMAPEAL-----FDRIYTHQSDVWSFGVLLWEIFTLGG--SP 237
Query: 330 PPG 332
PG
Sbjct: 238 YPG 240
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 55/243 (22%)
Query: 121 AQGRFGAVWKAKF---------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDN 167
+G FG V A+ + VAVK+ +D SE E+ K+ +H N
Sbjct: 30 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKN 88
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ ++ +
Sbjct: 89 IINLLGACTQDGPL----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-L 269
L A +++G+ +L + HRD + NVL+ D IADFGLA +
Sbjct: 145 LVSCAYQVARGMEYLASK-----------KCIHRDLAARNVLVTEDNVMKIADFGLARDI 193
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSP 329
T+G++ ++MAPE L F R + D+++ ++LWE+ + SP
Sbjct: 194 HHIDYYKKTTNGRLPV-KWMAPEAL-----FDRIYTHQSDVWSFGVLLWEIFTLGG--SP 245
Query: 330 PPG 332
PG
Sbjct: 246 YPG 248
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 55/243 (22%)
Query: 121 AQGRFGAVWKAKF---------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDN 167
+G FG V A+ + VAVK+ +D SE E+ K+ +H N
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKN 95
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ ++ +
Sbjct: 96 IINLLGACTQDGPL----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-L 269
L A +++G+ +L + HRD + NVL+ D IADFGLA +
Sbjct: 152 LVSCAYQVARGMEYLASK-----------KCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSP 329
T+G++ ++MAPE L F R + D+++ ++LWE+ + SP
Sbjct: 201 HHIDYYKKTTNGRLPV-KWMAPEAL-----FDRIYTHQSDVWSFGVLLWEIFTLGG--SP 252
Query: 330 PPG 332
PG
Sbjct: 253 YPG 255
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKF---------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDN 167
+G FG V A+ + VAVK+ +D SE E+ K+ +H N
Sbjct: 37 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKN 95
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ ++ +
Sbjct: 96 IINLLGACTQDGPL----YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L A +++G+ +L + HRD + NVL+ D IADFGLA
Sbjct: 152 LVSCAYQVARGMEYLASK-----------KCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
T ++MAPE L F R + D+++ ++LWE+ + SP
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSFGVLLWEIFTLGG--SPY 253
Query: 331 PG 332
PG
Sbjct: 254 PG 255
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 80 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 133
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 180
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 181 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 14 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 73
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 74 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 127
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 128 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 174
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + I + D+++ + +WEL + S
Sbjct: 175 VPIKWMALESILHRIYTHQS-----DVWSYGVTVWELMTFGS 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 31/243 (12%)
Query: 115 QLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHM---EHDNILRY 171
++V G FG V+KAK K +++ K + E I ++ + +H I++
Sbjct: 22 EIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL 81
Query: 172 IGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHLHEE 228
+GA + W++ + G++ D + + +T Q+ + M + L LH +
Sbjct: 82 LGAYYHD----GKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 229 ILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRY 288
+ HRD K+ NVL+ + +ADFG++ + K +GT +
Sbjct: 137 -----------RIIHRDLKAGNVLMTLEGDIRLADFGVSA--KNLKTLQKRDSFIGTPYW 183
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY---RLPFSAEVGDH 345
MAPEV+ + D+++ + L E+A + PP E R+ D
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMA----QIEPPHHELNPMRVLLKIAKSDP 239
Query: 346 PSL 348
P+L
Sbjct: 240 PTL 242
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 46/232 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
I L+ QG FG V++ ++ VAVK ++++ + +E + K
Sbjct: 19 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV-----------TWEQL 211
H ++R +G +G+ ++ G L +L+ T +++
Sbjct: 79 CHH--VVRLLGVVSKGQPT----LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LF 270
++A ++ G+ +L+ + HRD + N ++ D T I DFG+ ++
Sbjct: 133 IQMAAEIADGMAYLNAK-----------KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
E G + R+MAPE L+ + F+ + DM++ +VLWE+ S
Sbjct: 182 ETAYYRKGGKGLLPV-RWMAPESLKDGV-FTTSS----DMWSFGVVLWEITS 227
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 53/242 (21%)
Query: 121 AQGRFGAVWKAKF---------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDN 167
+G FG V A+ + VAVK+ +D SE E+ K+ +H N
Sbjct: 78 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKN 136
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ ++ +
Sbjct: 137 IINLLGACTQDGPL----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF 270
L A +++G+ +L + HRD + NVL+ D IADFGLA
Sbjct: 193 LVSCAYQVARGMEYLASK-----------KCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP 330
T ++MAPE L F R + D+++ ++LWE+ + SP
Sbjct: 242 HHIDYYKKTTNGRLPVKWMAPEAL-----FDRIYTHQSDVWSFGVLLWEIFTLGG--SPY 294
Query: 331 PG 332
PG
Sbjct: 295 PG 296
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 102/231 (44%), Gaps = 39/231 (16%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNEN-------VAVKIF---LMQDKQSWQSEQEIFKLP 161
R I L +G FG V+ A+ N + VAVK + ++ +Q E E+ L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL--LT 72
Query: 162 HMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN----IVTWEQLCRIA-- 215
+++H++I+++ G G+ + ++ Y + G L FL+ + ++ + R A
Sbjct: 73 NLQHEHIVKFYGVCGDGDPL----IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKG 128
Query: 216 -LSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGK 274
L +S+ ++H+ +I HRD + N L+ ++L I DFG++
Sbjct: 129 ELGLSQ-MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSR-----D 182
Query: 275 PCGDTHGQVGTR-----RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
+ +VG R+M PE + R D+++ ++LWE+
Sbjct: 183 VYSTDYYRVGGHTMLPIRWMPPESI-----MYRKFTTESDVWSFGVILWEI 228
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 66/259 (25%)
Query: 113 SIQLVEVKAQGRFGAVWKAK---FKNENVAVKI---FLMQDKQSWQSEQEIFKLPHM--- 163
+++ +V G FG V A V++++ L + S + E + +L M
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 164 -EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK-------------------- 202
H+NI+ +GA ++ +LI Y G L ++L+
Sbjct: 106 GSHENIVNLLGAC----TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 203 ----CNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLT 258
N++T+E L A ++KG+ L +K V HRD + NVL+
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLE----------FKSCV-HRDLAARNVLVTHGKV 210
Query: 259 AAIADFGLALLFEPGKPCGDTHGQV-GTRR----YMAPEVLEGAINFSRDAFLRIDMYAC 313
I DFGLA D++ V G R +MAPE L F ++ D+++
Sbjct: 211 VKICDFGLA-----RDIMSDSNYVVRGNARLPVKWMAPESL-----FEGIYTIKSDVWSY 260
Query: 314 ALVLWELASRCSSVSPPPG 332
++LWE+ S V+P PG
Sbjct: 261 GILLWEIFSL--GVNPYPG 277
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 36/221 (16%)
Query: 121 AQGRFGAVWKAKFKN-----ENVAVKIFLMQD-----KQSWQSEQEIFKLPHMEHDNILR 170
+G FG V+ A+ N + + V + ++D ++ + E E+ L +++H++I++
Sbjct: 22 GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL--LTNLQHEHIVK 79
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN----IVTWEQLCRIALSMSKGLMHLH 226
+ G G+ + ++ Y + G L FL+ + ++ E L+ S+ ++H+
Sbjct: 80 FYGVCVEGDPL----IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ-MLHIA 134
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
++I HRD + N L+ +L I DFG++ + +VG
Sbjct: 135 QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS-----RDVYSTDYYRVGGH 189
Query: 287 -----RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
R+M PE + R D+++ +VLWE+ +
Sbjct: 190 TMLPIRWMPPESI-----MYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 45/198 (22%)
Query: 154 EQEIFKLPHMEHDNILR---YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
E EI L + H I++ + AE +++++ E G L D + N E
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAE--------DYYIVLELMEGGELFDKVVGNKRLKEA 239
Query: 211 LCRIAL-SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGL 266
C++ M + +LHE + HRD K NVLL S D I DFG
Sbjct: 240 TCKLYFYQMLLAVQYLHEN-----------GIIHRDLKPENVLLSSQEEDCLIKITDFGH 288
Query: 267 ALLFEPGKPCGDT---HGQVGTRRYMAPEVL--EGAINFSRDAFLRIDMYACALVLWELA 321
+ K G+T GT Y+APEVL G ++R +D ++ ++L+
Sbjct: 289 S------KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNR----AVDCWSLGVILF--- 335
Query: 322 SRCSSVSPPPGEYRLPFS 339
C S PP E+R S
Sbjct: 336 -ICLSGYPPFSEHRTQVS 352
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 55/243 (22%)
Query: 121 AQGRFGAVWKAKF---------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHDN 167
+G FG V A+ + VAVK+ +D SE E+ K+ +H N
Sbjct: 29 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-KHKN 87
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN-----------------IVTWEQ 210
I+ +GA + + ++I Y +G+L ++L+ ++ +
Sbjct: 88 IINLLGACTQDGPL----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 211 LCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-L 269
L A +++G+ +L + HRD + NVL+ D IADFGLA +
Sbjct: 144 LVSCAYQVARGMEYLASK-----------KCIHRDLAARNVLVTEDNVMKIADFGLARDI 192
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSP 329
T+G++ ++MAPE L F R + D+++ ++LWE+ + SP
Sbjct: 193 HHIDYYKKTTNGRLPV-KWMAPEAL-----FDRIYTHQSDVWSFGVLLWEIFTLGG--SP 244
Query: 330 PPG 332
PG
Sbjct: 245 YPG 247
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 31/216 (14%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-ENVAVKIFL------MQDKQSWQSEQEIFKLPHMEHD 166
I+L +G+FG V + + + EN A+ + + D + QE + +H
Sbjct: 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWE--QLCRIALSMSKGLMH 224
+I++ IG W+I G L FL+ + + L A +S L +
Sbjct: 452 HIVKLIGV-----ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + NVL+ + + DFGL+ E + G++
Sbjct: 507 LESK-----------RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
++MAPE +INF R D++ + +WE+
Sbjct: 556 I-KWMAPE----SINFRRFTSAS-DVWMFGVCMWEI 585
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 95/227 (41%), Gaps = 42/227 (18%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIF-----LMQDKQSWQSEQEIFKLPHMEHDN 167
+++E G +G V A+ + VA+K ++ + + E +I K H +HDN
Sbjct: 57 EIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK--HFKHDN 114
Query: 168 ILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI---------VTWEQLCRIALSM 218
I+ I R + EF + + D ++ ++ +T E + +
Sbjct: 115 IIA-IKDILRPTVPYGEFKSVYV------VLDLMESDLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA--LLFEPGKPC 276
+GL ++H V HRD K +N+L+ + I DFG+A L P +
Sbjct: 168 LRGLKYMHSA-----------QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 216
Query: 277 GDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
V TR Y APE++ +++ ID+++ + E+ +R
Sbjct: 217 YFMTEYVATRWYRAPELMLSLHEYTQA----IDLWSVGCIFGEMLAR 259
>pdb|1LX5|B Chain B, Crystal Structure Of The Bmp7ACTRII EXTRACELLULAR DOMAIN
COMPLEX
pdb|2GOO|C Chain C, Ternary Complex Of Bmp-2 Bound To Bmpr-Ia-Ecd And
Actrii-Ecd
pdb|2GOO|F Chain F, Ternary Complex Of Bmp-2 Bound To Bmpr-Ia-Ecd And
Actrii-Ecd
Length = 102
Score = 45.8 bits (107), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 1 MECYDKPKCVEKRPESKKNLNFCCCEGDMCNKDFAWEP 38
+ CYD+ C+EK+ + + FCCCEG+MCN+ F++ P
Sbjct: 64 INCYDRTDCIEKKDSPE--VYFCCCEGNMCNEKFSYFP 99
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 45/198 (22%)
Query: 154 EQEIFKLPHMEHDNILR---YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQ 210
E EI L + H I++ + AE +++++ E G L D + N E
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAE--------DYYIVLELMEGGELFDKVVGNKRLKEA 253
Query: 211 LCRIAL-SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGL 266
C++ M + +LHE + HRD K NVLL S D I DFG
Sbjct: 254 TCKLYFYQMLLAVQYLHEN-----------GIIHRDLKPENVLLSSQEEDCLIKITDFG- 301
Query: 267 ALLFEPGKPCGDT---HGQVGTRRYMAPEVL--EGAINFSRDAFLRIDMYACALVLWELA 321
K G+T GT Y+APEVL G ++R +D ++ ++L+
Sbjct: 302 -----HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNR----AVDCWSLGVILF--- 349
Query: 322 SRCSSVSPPPGEYRLPFS 339
C S PP E+R S
Sbjct: 350 -ICLSGYPPFSEHRTQVS 366
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 100/246 (40%), Gaps = 58/246 (23%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIFLMQDKQSWQS--EQEIFKLPHM 163
+I+ V +G FG V++A+ VAVK+ + Q+ ++E +
Sbjct: 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 107
Query: 164 EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK-------CNIV---------- 206
++ NI++ +G G+ + L+ Y G L +FL+ C++
Sbjct: 108 DNPNIVKLLGVCAVGKPM----CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 207 ---------TWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDL 257
EQLC IA ++ G+ +L E HRD + N L+ ++
Sbjct: 164 SSPGPPPLSCAEQLC-IARQVAAGMAYLSER-----------KFVHRDLATRNCLVGENM 211
Query: 258 TAAIADFGLAL-LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALV 316
IADFGL+ ++ D + + R+M PE + F D++A +V
Sbjct: 212 VVKIADFGLSRNIYSADYYKADGNDAIPI-RWMPPESI-----FYNRYTTESDVWAYGVV 265
Query: 317 LWELAS 322
LWE+ S
Sbjct: 266 LWEIFS 271
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 46/232 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
I L+ QG FG V++ ++ VAVK ++++ + +E + K
Sbjct: 19 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV-----------TWEQL 211
H ++R +G +G+ ++ G L +L+ T +++
Sbjct: 79 CHH--VVRLLGVVSKGQPT----LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LF 270
++A ++ G+ +L+ + HRD + N ++ D T I DFG+ ++
Sbjct: 133 IQMAAEIADGMAYLNAK-----------KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
E G + R+MAPE L+ + F+ + DM++ +VLWE+ S
Sbjct: 182 ETDYYRKGGKGLLPV-RWMAPESLKDGV-FTTSS----DMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 44/231 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
I L+ QG FG V++ ++ VAVK ++++ + +E + K
Sbjct: 19 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV-----------TWEQL 211
H ++R +G +G+ ++ G L +L+ T +++
Sbjct: 79 CHH--VVRLLGVVSKGQPT----LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFE 271
++A ++ G+ +L+ + HRD + N ++ D T I DFG+
Sbjct: 133 IQMAAEIADGMAYLNAK-----------KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 272 PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ R+MAPE L+ + F+ + DM++ +VLWE+ S
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGV-FTTSS----DMWSFGVVLWEITS 227
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 46/232 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
I L+ QG FG V++ ++ VAVK ++++ + +E + K
Sbjct: 18 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 77
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV-----------TWEQL 211
H ++R +G +G+ ++ G L +L+ T +++
Sbjct: 78 CHH--VVRLLGVVSKGQPT----LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LF 270
++A ++ G+ +L+ + HRD + N ++ D T I DFG+ ++
Sbjct: 132 IQMAAEIADGMAYLNAK-----------KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 180
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
E G + R+MAPE L+ + F+ + DM++ +VLWE+ S
Sbjct: 181 ETDYYRKGGKGLLPV-RWMAPESLKDGV-FTTSS----DMWSFGVVLWEITS 226
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 44/231 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
I L+ QG FG V++ ++ VAVK ++++ + +E + K
Sbjct: 19 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV-----------TWEQL 211
H ++R +G +G+ ++ G L +L+ T +++
Sbjct: 79 CHH--VVRLLGVVSKGQPT----LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFE 271
++A ++ G+ +L+ + HRD + N ++ D T I DFG+
Sbjct: 133 IQMAAEIADGMAYLNAK-----------KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 181
Query: 272 PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ R+MAPE L+ + F+ + DM++ +VLWE+ S
Sbjct: 182 ETDXXRKGGKGLLPVRWMAPESLKDGV-FTTSS----DMWSFGVVLWEITS 227
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 241 VAHRDFKSNNVLLKSDL----TAAIADFGLALLFE-PGKPCGDTHGQVGTRRYMAPEVLE 295
V HRD K N+L+ + IAD G A LF P KP D V T Y APE+L
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLL 208
Query: 296 GAINFSRDAFLRIDMYACALVLWELAS 322
GA ++++ ID++A + EL +
Sbjct: 209 GARHYTK----AIDIWAIGCIFAELLT 231
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 34/223 (15%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKFKNEN-----VAVKIFLMQDKQS--W-QSEQEIFKLP 161
G + L+ V +G + V + K + VK L+ D + W Q+E+ +F+
Sbjct: 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE-- 64
Query: 162 HMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSK 220
+ N +G ++ + + + Y G L ++ E+ R + +S
Sbjct: 65 --QASNHPFLVGLHSCFQT-ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 121
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
L +LHE + +RD K +NVLL S+ + D+G+ + G GDT
Sbjct: 122 ALNYLHER-----------GIIYRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTT 167
Query: 281 GQV-GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
GT Y+APE+L G D +D +A ++++E+ +
Sbjct: 168 SXFCGTPNYIAPEILRG-----EDYGFSVDWWALGVLMFEMMA 205
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLAL-LFEPGKPCGDT 279
H +IL + + HRD K + VLL S +A + FG+A+ L E G G
Sbjct: 136 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG-- 193
Query: 280 HGQVGTRRYMAPEVLEGAINFSRDAFLR-IDMYACALVLWELASRC 324
G+VGT +MAPEV++ R+ + + +D++ C ++L+ L S C
Sbjct: 194 -GRVGTPHFMAPEVVK------REPYGKPVDVWGCGVILFILLSGC 232
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 34/223 (15%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKFKNEN-----VAVKIFLMQDKQS--W-QSEQEIFKLP 161
G + L+ V +G + V + K + VK L+ D + W Q+E+ +F+
Sbjct: 3 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE-- 60
Query: 162 HMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSK 220
+ N +G ++ + + + Y G L ++ E+ R + +S
Sbjct: 61 --QASNHPFLVGLHSCFQT-ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL 117
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
L +LHE + +RD K +NVLL S+ + D+G+ + G GDT
Sbjct: 118 ALNYLHER-----------GIIYRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTT 163
Query: 281 GQV-GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
GT Y+APE+L G D +D +A ++++E+ +
Sbjct: 164 SXFCGTPNYIAPEILRG-----EDYGFSVDWWALGVLMFEMMA 201
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 14/106 (13%)
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLAL-LFEPGKPCGDT 279
H +IL + + HRD K + VLL S +A + FG+A+ L E G G
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG-- 191
Query: 280 HGQVGTRRYMAPEVLEGAINFSRDAFLR-IDMYACALVLWELASRC 324
G+VGT +MAPEV++ R+ + + +D++ C ++L+ L S C
Sbjct: 192 -GRVGTPHFMAPEVVK------REPYGKPVDVWGCGVILFILLSGC 230
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 94/231 (40%), Gaps = 44/231 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
I L+ QG FG V++ ++ VAVK ++++ + +E + K
Sbjct: 16 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 75
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV-----------TWEQL 211
H ++R +G +G+ ++ G L +L+ T +++
Sbjct: 76 CHH--VVRLLGVVSKGQPT----LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 129
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFE 271
++A ++ G+ +L+ + HRD + N ++ D T I DFG+
Sbjct: 130 IQMAAEIADGMAYLNAK-----------KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIX 178
Query: 272 PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ R+MAPE L+ + F+ + DM++ +VLWE+ S
Sbjct: 179 ETDXXRKGGKGLLPVRWMAPESLKDGV-FTTSS----DMWSFGVVLWEITS 224
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 90/229 (39%), Gaps = 37/229 (16%)
Query: 103 SPPSPQQGCRSIQLVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQSE-----Q 155
P + + +L E G F V A E VA+KI DK + S+
Sbjct: 1 GPKDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIM---DKNTLGSDLPRIKT 57
Query: 156 EIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIA 215
EI L ++ H +I + + I +++ Y G L D++ E+ R+
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKI----FMVLEYCPGGELFDYIISQDRLSEEETRVV 113
Query: 216 LSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP 275
+I+ A + AHRD K N+L + DFGL KP
Sbjct: 114 F----------RQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLC-----AKP 158
Query: 276 CG--DTHGQV--GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G D H Q G+ Y APE+++G +A D+++ ++L+ L
Sbjct: 159 KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEA----DVWSMGILLYVL 203
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 34/231 (14%)
Query: 102 TSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENV-----AVKIFLMQDKQS--W-QS 153
+ S G + L+ V +G + V + K + VK L+ D + W Q+
Sbjct: 42 SGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQT 101
Query: 154 EQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCR 213
E+ +F+ + N +G ++ + + + Y G L ++ E+ R
Sbjct: 102 EKHVFE----QASNHPFLVGLHSCFQT-ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 156
Query: 214 I-ALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEP 272
+ +S L +LHE + +RD K +NVLL S+ + D+G+ +
Sbjct: 157 FYSAEISLALNYLHER-----------GIIYRDLKLDNVLLDSEGHIKLTDYGMC---KE 202
Query: 273 GKPCGDTHGQV-GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
G GDT GT Y+APE+L G D +D +A ++++E+ +
Sbjct: 203 GLRPGDTTSTFCGTPNYIAPEILRG-----EDYGFSVDWWALGVLMFEMMA 248
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 19/168 (11%)
Query: 152 QSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQL 211
Q QEI L ++H N+++ + E + +++ +G + + ++ +Q
Sbjct: 82 QVYQEIAILKKLDHPNVVKLV--EVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFE 271
+ KG+ +LH + + HRD K +N+L+ D IADFG++ F+
Sbjct: 140 RFYFQDLIKGIEYLHYQ-----------KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 272 PGKPCGDTHGQVGTRRYMAPEVL-EGAINFSRDAFLRIDMYACALVLW 318
VGT +MAPE L E FS A +D++A + L+
Sbjct: 189 GSDAL--LSNTVGTPAFMAPESLSETRKIFSGKA---LDVWAMGVTLY 231
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 114 IQLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSE-QEIFKLPHME-HDNIL 169
+++ V A+G F V++A+ A+K L +++ ++ QE+ + + H NI+
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 170 RYIGAEKRG----ESIHTEFWLITAYHERGSLCDFLKC----NIVTWEQLCRIALSMSKG 221
++ A G ++ EF L+T +G L +FLK ++ + + +I +
Sbjct: 90 QFCSAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 222 LMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA 267
+ H+H + KP + HRD K N+LL + T + DFG A
Sbjct: 149 VQHMHRQ---------KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 34/231 (14%)
Query: 102 TSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNEN-----VAVKIFLMQDKQS--W-QS 153
+ S G + L+ V +G + V + K + VK L+ D + W Q+
Sbjct: 10 SGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQT 69
Query: 154 EQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCR 213
E+ +F+ + N +G ++ + + + Y G L ++ E+ R
Sbjct: 70 EKHVFE----QASNHPFLVGLHSCFQT-ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR 124
Query: 214 I-ALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEP 272
+ +S L +LHE + +RD K +NVLL S+ + D+G+ +
Sbjct: 125 FYSAEISLALNYLHER-----------GIIYRDLKLDNVLLDSEGHIKLTDYGMC---KE 170
Query: 273 GKPCGDTHGQV-GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
G GDT GT Y+APE+L G D +D +A ++++E+ +
Sbjct: 171 GLRPGDTTSXFCGTPNYIAPEILRG-----EDYGFSVDWWALGVLMFEMMA 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 21 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LI G L D++ K NI + + L + ++KG+ +L
Sbjct: 81 CRLLGI-----CLTSTVQLIMQLMPFGXLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 134
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 135 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 181
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 182 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 218
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 24 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LI G L D++ K NI + + L + ++KG+ +L
Sbjct: 84 CRLLGI-----CLTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 137
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 138 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 184
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 185 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 147 DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL----- 201
+KQ SE + + ++H NI+RY ++ + +T +++ Y E G L +
Sbjct: 48 EKQMLVSEVNLLR--ELKHPNIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTK 103
Query: 202 KCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAI 261
+ + E + R+ ++ L H ++D V HRD K NV L +
Sbjct: 104 ERQYLDEEFVLRVMTQLTLALKECHR-----RSDG-GHTVLHRDLKPANVFLDGKQNVKL 157
Query: 262 ADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
DFGLA + VGT YM+PE + ++++ + D+++ +L+EL
Sbjct: 158 GDFGLARILNHDTSFAKAF--VGTPYYMSPEQM-NRMSYNEKS----DIWSLGCLLYEL 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 22/179 (12%)
Query: 147 DKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL----- 201
+KQ SE + + ++H NI+RY ++ + +T +++ Y E G L +
Sbjct: 48 EKQMLVSEVNLLR--ELKHPNIVRYY--DRIIDRTNTTLYIVMEYCEGGDLASVITKGTK 103
Query: 202 KCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAI 261
+ + E + R+ ++ L H ++D V HRD K NV L +
Sbjct: 104 ERQYLDEEFVLRVMTQLTLALKECH-----RRSDG-GHTVLHRDLKPANVFLDGKQNVKL 157
Query: 262 ADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
DFGLA + + VGT YM+PE + ++++ + D+++ +L+EL
Sbjct: 158 GDFGLARILNHDEDFAKEF--VGTPYYMSPEQM-NRMSYNEKS----DIWSLGCLLYEL 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFK--NENVAVK-----IFLMQDK-QSWQSEQEIFKLPHME 164
+L ++ +G FG V+ A+FK N+ A+K + LM D + E+ + L E
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WE 77
Query: 165 HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK-CNIVTWEQLCRIALSMSKGLM 223
H + + E++ + + Y G L ++ C+ + A + GL
Sbjct: 78 HPFLTHMFCTFQTKENL----FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD--THG 281
LH + + +RD K +N+LL D IADFG+ GD T+
Sbjct: 134 FLHSK-----------GIVYRDLKLDNILLDKDGHIKIADFGMC----KENMLGDAKTNE 178
Query: 282 QVGTRRYMAPEVLEG-AINFSRDAFLRIDMYACALVLWEL 320
GT Y+APE+L G N S +D ++ ++L+E+
Sbjct: 179 FCGTPDYIAPEILLGQKYNHS------VDWWSFGVLLYEM 212
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 17 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 76
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + +++G+ +L
Sbjct: 77 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAEGMNYL 130
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 131 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 177
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 178 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 214
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 23/224 (10%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHD-NI 168
G + +L++V G +G V+ + + + K++ M+ + Q+ H + +
Sbjct: 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV 111
Query: 169 LRYIGAEKRGESIH------TEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALS-MSKG 221
L +I ++H T+ LI Y G L L E +I + +
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171
Query: 222 LMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHG 281
L HLH K + +RD K N+LL S+ + DFGL+ F +
Sbjct: 172 LEHLH-----------KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETERAYD 219
Query: 282 QVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
GT YMAP+++ G + A +D ++ ++++EL + S
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKA---VDWWSLGVLMYELLTGAS 260
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V + G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 27 IKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LI G L D++ K NI + + L + ++KG+ +L
Sbjct: 87 CRLLGI-----CLTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 140
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 141 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 187
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 188 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 21 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 80
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LI G L D++ K NI + + L + ++KG+ +L
Sbjct: 81 CRLLGI-----CLTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 134
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 135 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 181
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 182 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 218
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LI G L D++ K NI + + L + ++KG+ +L
Sbjct: 80 CRLLGI-----CLTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 133
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 180
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 181 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 83/212 (39%), Gaps = 33/212 (15%)
Query: 115 QLVEVKAQGRFGA--VWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYI 172
+LV+ G FG + + K NE VAVK +K + ++EI + H NI+R+
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRF- 80
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
K T ++ Y G L +E++C ++++
Sbjct: 81 ---KEVILTPTHLAIVMEYASGGEL----------FERICNAGRFSEDEARFFFQQLISG 127
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLT--AAIADFGLALLFEPGKPCGDTHGQ----VGTR 286
+ + V HRD K N LL I DFG + H Q VGT
Sbjct: 128 VSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTP 180
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLW 318
Y+APEVL + A D+++C + L+
Sbjct: 181 AYIAPEVLLKKEYDGKVA----DVWSCGVTLY 208
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNI 168
+ V+ G+FG V + N++ VA+K ++ SE++ + + + H +
Sbjct: 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKL 65
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKC--NIVTWEQLCRIALSMSKGLMHLH 226
++ G I L+T + E G L D+L+ + E L + L + +G+ +L
Sbjct: 66 VQLYGVCLEQAPIC----LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 121
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
E V HRD + N L+ + ++DFG+ + T GT+
Sbjct: 122 E-----------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTK 166
Query: 287 ---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ +PEV +FSR + + D+++ +++WE+ S
Sbjct: 167 FPVKWASPEVF----SFSRYS-SKSDVWSFGVLMWEVFS 200
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 34/230 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKF-----KNENVAVKIFLMQDKQSW----QSEQEIFKLPHM 163
+++ +E + RFG V+K + AV I ++DK + E +
Sbjct: 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL 86
Query: 164 EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL-------KCNIVTWEQLCRIAL 216
+H N++ +G + + + +I +Y G L +FL ++ + AL
Sbjct: 87 QHPNVVCLLGVVTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 142
Query: 217 SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPC 276
+HL +I V H+D + NVL+ L I+D GL
Sbjct: 143 E-PPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY----A 197
Query: 277 GDTHGQVGTR----RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
D + +G R+MAPE + FS D+ D+++ +VLWE+ S
Sbjct: 198 ADYYKLLGNSLLPIRWMAPEAIMYG-KFSIDS----DIWSYGVVLWEVFS 242
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LI G L D++ K NI + + L + ++KG+ +L
Sbjct: 82 CRLLGI-----CLTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 135
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 136 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 182
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 183 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 125/309 (40%), Gaps = 74/309 (23%)
Query: 121 AQGRFGAVWKAKF-------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHD-NI 168
+G FG V +A VAVK+ + ++ SE +I L H+ H N+
Sbjct: 36 GRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI--LIHIGHHLNV 93
Query: 169 LRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKC-------------NIVTWEQLCRI 214
+ +GA K G + +I + + G+L +L+ + +T E L
Sbjct: 94 VNLLGACTKPGGPL----MVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 215 ALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA--LLFEP 272
+ ++KG+ E L ++ HRD + N+LL I DFGLA + +P
Sbjct: 150 SFQVAKGM-----EFLASRK------XIHRDLAARNILLSEKNVVKIXDFGLARDIYKDP 198
Query: 273 GKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPP 331
GD + ++MAPE + F R ++ D+++ ++LWE+ S +S
Sbjct: 199 DYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGAS----- 245
Query: 332 GEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEA 391
P+ D ++E + T PE ++ TM +CW +
Sbjct: 246 -----PYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQ----------TMLDCWHGEPSQ 290
Query: 392 RLSASCVVE 400
R + S +VE
Sbjct: 291 RPTFSELVE 299
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 106/252 (42%), Gaps = 50/252 (19%)
Query: 112 RSIQLVEVKAQGRFGAVWKAK---FKNENVAVKIFLMQDKQSWQSEQ------EIFKLPH 162
++Q + G FG V +A E+ +K+ + K + +++ E+ + H
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 163 M-EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMS-- 219
+ +H+NI+ +GA G + +IT Y G L +FL+ E + +L+
Sbjct: 91 LGQHENIVNLLGACTHGGPV----LVITEYCCYGDLLNFLRRKA---EAMLGPSLAPGQD 143
Query: 220 --------------KGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
+ L+H ++ A HRD + NVLL + A I DFG
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 203
Query: 266 LALLFEPGKPCGDTHGQV-GTRR----YMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
LA D++ V G R +MAPE + F ++ D+++ ++LWE+
Sbjct: 204 LAR-----DIMNDSNYIVKGNARLPVKWMAPESI-----FDCVYTVQSDVWSYGILLWEI 253
Query: 321 ASRCSSVSPPPG 332
S ++P PG
Sbjct: 254 FSL--GLNPYPG 263
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 38/230 (16%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKN-----ENVAVKIFLMQD-----KQSWQSEQEIFKLP 161
R I L +G FG V+ A+ N + + V + +++ +Q +Q E E+ +
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM- 99
Query: 162 HMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN------IVTWEQLCRIA 215
++H +I+R+ G G + ++ Y G L FL+ + + E +
Sbjct: 100 -LQHQHIVRFFGVCTEGRPL----LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 154
Query: 216 LSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP 275
L + + L+ + ++ HRD + N L+ L I DFG++
Sbjct: 155 LGLGQ-LLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-----DI 208
Query: 276 CGDTHGQVGTR-----RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
+ +VG R R+M PE + R D+++ +VLWE+
Sbjct: 209 YSTDYYRVGGRTMLPIRWMPPESI-----LYRKFTTESDVWSFGVVLWEI 253
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 82
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LI G L D++ K NI + + L + ++KG+ +L
Sbjct: 83 CRLLGI-----CLTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 136
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFGLA L G + H + G
Sbjct: 137 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGGK 183
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 184 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 16/91 (17%)
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGK--PCGDTHGQVGTRRYMAPEVLEGAINF 300
HRD K N+L+ +D A + DFG+A K G+T VGT Y APE F
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT---VGTLYYXAPE------RF 207
Query: 301 SRD-AFLRIDMYACALVLWELASRCSSVSPP 330
S A R D+YA VL+E C + SPP
Sbjct: 208 SESHATYRADIYALTCVLYE----CLTGSPP 234
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 82 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 135
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFG A L G + H + G
Sbjct: 136 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGK 182
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 183 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 34/230 (14%)
Query: 113 SIQLVEVKAQGRFGAVWKAKF-----KNENVAVKIFLMQDKQSW----QSEQEIFKLPHM 163
+++ +E + RFG V+K + AV I ++DK + E +
Sbjct: 10 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL 69
Query: 164 EHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFL-------KCNIVTWEQLCRIAL 216
+H N++ +G + + + +I +Y G L +FL ++ + AL
Sbjct: 70 QHPNVVCLLGVVTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSAL 125
Query: 217 SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPC 276
+HL +I V H+D + NVL+ L I+D GL
Sbjct: 126 E-PPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVY----A 180
Query: 277 GDTHGQVGTR----RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
D + +G R+MAPE + FS D+ D+++ +VLWE+ S
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYG-KFSIDS----DIWSYGVVLWEVFS 225
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 38/212 (17%)
Query: 121 AQGRFGAVWKAKFK--NENVAVK-----IFLMQDK-QSWQSEQEIFKLPHMEHDNILRYI 172
+G FG V+ A+FK N+ A+K + LM D + E+ + L EH +
Sbjct: 26 GKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-WEHPFLTHMF 84
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLK-CNIVTWEQLCRIALSMSKGLMHLHEEILP 231
+ E++ + + Y G L ++ C+ + A + GL LH +
Sbjct: 85 CTFQTKENL----FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK--- 137
Query: 232 NKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD--THGQVGTRRYM 289
+ +RD K +N+LL D IADFG+ GD T+ GT Y+
Sbjct: 138 --------GIVYRDLKLDNILLDKDGHIKIADFGMC----KENMLGDAKTNXFCGTPDYI 185
Query: 290 APEVLEG-AINFSRDAFLRIDMYACALVLWEL 320
APE+L G N S +D ++ ++L+E+
Sbjct: 186 APEILLGQKYNHS------VDWWSFGVLLYEM 211
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 80 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 133
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFG A L G + H + G
Sbjct: 134 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGK 180
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 181 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 121 AQGRFGAVWKAKFKNENV--AVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRG 178
+G FG V + + K AVK ++ ++ +E+ + I+ GA + G
Sbjct: 102 GRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA----EELMACAGLTSPRIVPLYGAVREG 157
Query: 179 ESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMS-KGLMHLHEEILPNKADSY 237
++ L+ E GSL +K E L + +GL +LH
Sbjct: 158 PWVNIFMELL----EGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR--------- 204
Query: 238 KPAVAHRDFKSNNVLLKSDLT-AAIADFGLALLFEP---GKPCGDTHGQVGTRRYMAPEV 293
+ H D K++NVLL SD + AA+ DFG A+ +P GK GT +MAPEV
Sbjct: 205 --RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV 262
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRC 324
+ G R ++D+++ ++ + + C
Sbjct: 263 VLG-----RSCDAKVDVWSSCCMMLHMLNGC 288
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILR-----YIGAE 175
G G VWK +F+ + + M+ + + + I M+ D +L+ YI +
Sbjct: 34 GSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRIL----MDLDVVLKSHDCPYI-VQ 88
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNI---VTWEQLCRIALSMSKGLMHLHEEILPN 232
G I T + A G+ + LK + + L ++ +++ K L +L E
Sbjct: 89 CFGTFI-TNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE----- 142
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ--VGTRRYMA 290
K V HRD K +N+LL + DFG++ G+ D G YMA
Sbjct: 143 -----KHGVIHRDVKPSNILLDERGQIKLCDFGIS-----GRLVDDKAKDRSAGCAAYMA 192
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
PE ++ D +R D+++ + L ELA+
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELAT 224
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 38/230 (16%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKN-----ENVAVKIFLMQD-----KQSWQSEQEIFKLP 161
R I L +G FG V+ A+ N + + V + +++ +Q +Q E E+ +
Sbjct: 12 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM- 70
Query: 162 HMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN------IVTWEQLCRIA 215
++H +I+R+ G G + ++ Y G L FL+ + + E +
Sbjct: 71 -LQHQHIVRFFGVCTEGRPL----LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 125
Query: 216 LSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP 275
L + + L+ + ++ HRD + N L+ L I DFG++
Sbjct: 126 LGLGQ-LLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-----DI 179
Query: 276 CGDTHGQVGTR-----RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
+ +VG R R+M PE + R D+++ +VLWE+
Sbjct: 180 YSTDYYRVGGRTMLPIRWMPPESI-----LYRKFTTESDVWSFGVVLWEI 224
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 46/232 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
I L+ QG FG V++ ++ VAVK ++++ + +E + K
Sbjct: 19 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 78
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV-----------TWEQL 211
H ++R +G +G+ ++ G L +L+ T +++
Sbjct: 79 CHH--VVRLLGVVSKGQPT----LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LF 270
++A ++ G+ +L+ + HR+ + N ++ D T I DFG+ ++
Sbjct: 133 IQMAAEIADGMAYLNAK-----------KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
E G + R+MAPE L+ + F+ + DM++ +VLWE+ S
Sbjct: 182 ETDYYRKGGKGLLPV-RWMAPESLKDGV-FTTSS----DMWSFGVVLWEITS 227
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 38/230 (16%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKN-----ENVAVKIFLMQD-----KQSWQSEQEIFKLP 161
R I L +G FG V+ A+ N + + V + +++ +Q +Q E E+ +
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTM- 76
Query: 162 HMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN------IVTWEQLCRIA 215
++H +I+R+ G G + ++ Y G L FL+ + + E +
Sbjct: 77 -LQHQHIVRFFGVCTEGRPL----LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 131
Query: 216 LSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP 275
L + + L+ + ++ HRD + N L+ L I DFG++
Sbjct: 132 LGLGQ-LLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-----DI 185
Query: 276 CGDTHGQVGTR-----RYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
+ +VG R R+M PE + R D+++ +VLWE+
Sbjct: 186 YSTDYYRVGGRTMLPIRWMPPESI-----LYRKFTTESDVWSFGVVLWEI 230
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 27 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 86
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LIT G L D++ K NI + + L + ++KG+ +L
Sbjct: 87 CRLLGI-----CLTSTVQLITQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 140
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFG A L G + H + G
Sbjct: 141 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGK 187
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 188 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 98/232 (42%), Gaps = 46/232 (19%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
I L+ QG FG V++ ++ VAVK ++++ + +E + K
Sbjct: 20 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT 79
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV-----------TWEQL 211
H ++R +G +G+ ++ G L +L+ T +++
Sbjct: 80 CHH--VVRLLGVVSKGQPT----LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 133
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLAL-LF 270
++A ++ G+ +L+ + HR+ + N ++ D T I DFG+ ++
Sbjct: 134 IQMAAEIADGMAYLNAK-----------KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 182
Query: 271 EPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
E G + R+MAPE L+ + F+ + DM++ +VLWE+ S
Sbjct: 183 ETDYYRKGGKGLLPV-RWMAPESLKDGV-FTTSS----DMWSFGVVLWEITS 228
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 74/185 (40%), Gaps = 26/185 (14%)
Query: 118 EVKAQGRFGAVWKAKFKNENVAVKIFLMQDK----QSWQSEQEIFKLPHMEHDNILRYIG 173
+V G F V A+ K V I + K + E EI L ++H NI+
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 174 AEKRGESIHTEFWLITAYHERGSLCD-FLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
+ G ++ L++ G L D ++ T R+ + + +LH+
Sbjct: 84 IYESGGHLYLIMQLVSG----GELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD----- 134
Query: 233 KADSYKPAVAHRDFKSNNVL---LKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYM 289
+ HRD K N+L L D I+DFGL+ + +PG GT Y+
Sbjct: 135 ------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA---CGTPGYV 185
Query: 290 APEVL 294
APEVL
Sbjct: 186 APEVL 190
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 76/185 (41%), Gaps = 26/185 (14%)
Query: 118 EVKAQGRFGAVWKAKFKNEN--VAVKIFLMQ--DKQSWQSEQEIFKLPHMEHDNILRYIG 173
+V G F V A+ K VA+K + + + E EI L ++H NI+
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 174 AEKRGESIHTEFWLITAYHERGSLCD-FLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
+ G ++ L++ G L D ++ T R+ + + +LH+
Sbjct: 84 IYESGGHLYLIMQLVSG----GELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD----- 134
Query: 233 KADSYKPAVAHRDFKSNNVL---LKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYM 289
+ HRD K N+L L D I+DFGL+ + +PG GT Y+
Sbjct: 135 ------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA---CGTPGYV 185
Query: 290 APEVL 294
APEVL
Sbjct: 186 APEVL 190
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 44/246 (17%)
Query: 105 PSPQQGCRSIQLVE-VKAQGRFG-AVWKAKFKNENVAVK--------IFLMQDKQSWQSE 154
P+ +Q +++ + E + G G V++ F+ VAVK I LM+ K +S+
Sbjct: 7 PNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD 66
Query: 155 QEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI 214
+H N++RY +E ++ L +L D ++ V+ E L
Sbjct: 67 ---------DHPNVIRYYCSETTDRFLYIALELCNL-----NLQDLVESKNVSDENL--- 109
Query: 215 ALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS-------------DLTAAI 261
L + L +I A + + HRD K N+L+ + +L I
Sbjct: 110 KLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169
Query: 262 ADFGLALLFEPGKPCGDT--HGQVGTRRYMAPEVLEGAINF--SRDAFLRIDMYACALVL 317
+DFGL + G+ T + GT + APE+LE + N R ID+++ V
Sbjct: 170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Query: 318 WELASR 323
+ + S+
Sbjct: 230 YYILSK 235
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKF-----KNENVAVKIF----LMQDKQSWQSEQEIFKL 160
G + ++L+E G FG V + ++ K +VAVK L Q + +E+ +
Sbjct: 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 75
Query: 161 PHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
++H N++R G + ++T GSL D L+ + L R A+ +
Sbjct: 76 HSLDHRNLIRLYGV-----VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 130
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
++G+ +L + HRD + N+LL + I DFGL P D
Sbjct: 131 AEGMGYLESK-----------RFIHRDLAARNLLLATRDLVKIGDFGLMRAL----PQND 175
Query: 279 THGQVGTRRYM-----APEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H + R + APE L+ FS + D + + LWE+
Sbjct: 176 DHXVMQEHRKVPFAWCAPESLK-TRTFSHAS----DTWMFGVTLWEM 217
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 121 AQGRFGAVWKAKFKNENV--AVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRG 178
+G FG V + + K AVK ++ ++ +E+ + I+ GA + G
Sbjct: 83 GRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA----EELMACAGLTSPRIVPLYGAVREG 138
Query: 179 ESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMS-KGLMHLHEEILPNKADSY 237
++ L+ E GSL +K E L + +GL +LH
Sbjct: 139 PWVNIFMELL----EGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSR--------- 185
Query: 238 KPAVAHRDFKSNNVLLKSDLT-AAIADFGLALLFEP---GKPCGDTHGQVGTRRYMAPEV 293
+ H D K++NVLL SD + AA+ DFG A+ +P GK GT +MAPEV
Sbjct: 186 --RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV 243
Query: 294 LEGAINFSRDAFLRIDMYACALVLWELASRC 324
+ G R ++D+++ ++ + + C
Sbjct: 244 VLG-----RSCDAKVDVWSSCCMMLHMLNGC 269
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 34/224 (15%)
Query: 107 PQQGCRSIQLVEVKAQGRFGAV--WKAKFKNENVAVKIF----LMQDKQSWQSEQEIFKL 160
P+ + Q++ G FG V +++ A+K+ +++ KQ + E L
Sbjct: 1 PKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60
Query: 161 PHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMS 219
+ H I+R G + + I ++I Y E G L L+ + + + A +
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQI----FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116
Query: 220 KGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD- 278
L +LH + + +RD K N+LL + I DFG A K D
Sbjct: 117 LALEYLHSK-----------DIIYRDLKPENILLDKNGHIKITDFGFA------KYVPDV 159
Query: 279 THGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
T+ GT Y+APEV+ ++ ID ++ ++++E+ +
Sbjct: 160 TYXLCGTPDYIAPEVVS-----TKPYNKSIDWWSFGILIYEMLA 198
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 16/197 (8%)
Query: 155 QEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI 214
+EI L H H NIL R +H E A H+ + + ++ ++ RI
Sbjct: 78 REIRLLNHFHHPNILGL-----RDIFVHFE---EPAMHKLYLVTELMRTDLAQVIHDQRI 129
Query: 215 ALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGK 274
+S + + + IL ++ V HRD N+LL + I DF LA E
Sbjct: 130 VIS-PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTA 186
Query: 275 PCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
TH V R Y APE++ F++ +DM++ V+ E+ +R +
Sbjct: 187 DANKTH-YVTHRWYRAPELVMQFKGFTK----LVDMWSAGCVMAEMFNRKALFRGSTFYN 241
Query: 335 RLPFSAEVGDHPSLEDM 351
+L EV P +ED+
Sbjct: 242 QLNKIVEVVGTPKIEDV 258
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
EI D ++ + +RD K N+LL I+D GLA+ G+ G+VGT
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVG 350
Query: 288 YMAPEVLE 295
YMAPEV++
Sbjct: 351 YMAPEVVK 358
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 16/197 (8%)
Query: 155 QEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI 214
+EI L H H NIL R +H E A H+ + + ++ ++ RI
Sbjct: 78 REIRLLNHFHHPNILGL-----RDIFVHFE---EPAMHKLYLVTELMRTDLAQVIHDQRI 129
Query: 215 ALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGK 274
+S + + + IL ++ V HRD N+LL + I DF LA E
Sbjct: 130 VIS-PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTA 186
Query: 275 PCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
TH V R Y APE++ F++ +DM++ V+ E+ +R +
Sbjct: 187 DANKTH-YVTHRWYRAPELVMQFKGFTK----LVDMWSAGCVMAEMFNRKALFRGSTFYN 241
Query: 335 RLPFSAEVGDHPSLEDM 351
+L EV P +ED+
Sbjct: 242 QLNKIVEVVGTPKIEDV 258
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 82/212 (38%), Gaps = 33/212 (15%)
Query: 115 QLVEVKAQGRFGA--VWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYI 172
+LV+ G FG + + K NE VAVK +K ++EI + H NI+R+
Sbjct: 21 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF- 79
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
K T ++ Y G L +E++C ++++
Sbjct: 80 ---KEVILTPTHLAIVMEYASGGEL----------FERICNAGRFSEDEARFFFQQLISG 126
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLT--AAIADFGLALLFEPGKPCGDTHGQ----VGTR 286
+ + V HRD K N LL I DFG + H Q VGT
Sbjct: 127 VSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTP 179
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLW 318
Y+APEVL + A D+++C + L+
Sbjct: 180 AYIAPEVLLKKEYDGKVA----DVWSCGVTLY 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 154 EQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCD-FLKCNIVTWEQLC 212
E EI L ++H NI+ + G ++ L++ G L D ++ T
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG----GELFDRIVEKGFYTERDAS 119
Query: 213 RIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVL---LKSDLTAAIADFGLALL 269
R+ + + +LH+ + HRD K N+L L D I+DFGL+ +
Sbjct: 120 RLIFQVLDAVKYLHD-----------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVL 294
+PG GT Y+APEVL
Sbjct: 169 EDPGSVLSTA---CGTPGYVAPEVL 190
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 121/327 (37%), Gaps = 55/327 (16%)
Query: 106 SPQQGCRSIQLVEVKAQGRFGAVW--KAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHM 163
P+ + +++ +G FG V K K A+KI K+ ++ E+ +
Sbjct: 4 DPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKIL---KKEVIVAKDEVAHT--L 58
Query: 164 EHDNILR-----YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALS 217
+ +L+ ++ A K H + Y G L L V E R
Sbjct: 59 TENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 118
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCG 277
+ L +LH E V +RD K N++L D I DFGL + G G
Sbjct: 119 IVSALDYLHSE----------KNVVYRDLKLENLMLDKDGHIKITDFGLC---KEGIKDG 165
Query: 278 DTHGQV-GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRL 336
T GT Y+APEVLE D +D + +V++E+ C RL
Sbjct: 166 ATMKXFCGTPEYLAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RL 209
Query: 337 PFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSAS 396
PF + DH E + E ++ +++R P T A L + D + RL
Sbjct: 210 PFYNQ--DH---EKLFELILMEEIR--FPRTLGPEAKSL-----LSGLLKKDPKQRLGGG 257
Query: 397 CVVERGMLALCDTMEECWDHDAEARLS 423
+ ++ W H E +LS
Sbjct: 258 SEDAKEIMQHRFFAGIVWQHVYEKKLS 284
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKF-----KNENVAVKIF----LMQDKQSWQSEQEIFKL 160
G + ++L+E G FG V + ++ K +VAVK L Q + +E+ +
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 161 PHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
++H N++R G + ++T GSL D L+ + L R A+ +
Sbjct: 66 HSLDHRNLIRLYGV-----VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
++G+ +L + HRD + N+LL + I DFGL P D
Sbjct: 121 AEGMGYLESK-----------RFIHRDLAARNLLLATRDLVKIGDFGLMRAL----PQND 165
Query: 279 THGQVGTRRYM-----APEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H + R + APE L+ FS + D + + LWE+
Sbjct: 166 DHXVMQEHRKVPFAWCAPESLK-TRTFSHAS----DTWMFGVTLWEM 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 22/145 (15%)
Query: 154 EQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCD-FLKCNIVTWEQLC 212
E EI L ++H NI+ + G ++ L++ G L D ++ T
Sbjct: 64 ENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSG----GELFDRIVEKGFYTERDAS 119
Query: 213 RIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVL---LKSDLTAAIADFGLALL 269
R+ + + +LH+ + HRD K N+L L D I+DFGL+ +
Sbjct: 120 RLIFQVLDAVKYLHD-----------LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVL 294
+PG GT Y+APEVL
Sbjct: 169 EDPGSVLSTA---CGTPGYVAPEVL 190
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 30/219 (13%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIF-LMQDKQSWQSEQEIFK-LPHMEHDNILR- 170
Q+ + QG FG V K K+ ++V I ++QD + E +I + L + H NI++
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 171 ----YIGAEKRGESIHTEFWLITAYHERGSLC-DFLKCNIVTWEQLCRI---ALSMSKGL 222
Y E+ I+ + C ++ + + L ++ L S G
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLL-KSDLTAAIADFGLALLFEPGKPCGDTHG 281
+HL V HRD K +NVL+ ++D T + DFG A P +P
Sbjct: 145 LHLPSV-----------NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP---NVA 190
Query: 282 QVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
+ +R Y APE++ G +++ +D+++ + E+
Sbjct: 191 YICSRYYRAPELIFGNQHYT----TAVDIWSVGCIFAEM 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
EI D ++ + +RD K N+LL I+D GLA+ G+ G+VGT
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---TIKGRVGTVG 350
Query: 288 YMAPEVLE 295
YMAPEV++
Sbjct: 351 YMAPEVVK 358
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
V HRD K N+ L DL I DFGLA E T GT Y+APEVL
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLS----- 190
Query: 301 SRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+ +D+++ +++ L V PP E
Sbjct: 191 KKGHSFEVDVWSIGCIMYTLL-----VGKPPFE 218
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
V HRD K N+ L DL I DFGLA E T GT Y+APEVL
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLS----- 194
Query: 301 SRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+ +D+++ +++ L V PP E
Sbjct: 195 KKGHSFEVDVWSIGCIMYTLL-----VGKPPFE 222
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 129/318 (40%), Gaps = 76/318 (23%)
Query: 114 IQLVEVKAQGRFGAVWKAKF-------KNENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
++L + +G FG V +A VAVK+ + ++ SE +I L H
Sbjct: 31 LKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI--LIH 88
Query: 163 MEHD-NILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKC---------------NI 205
+ H N++ +GA K G + +I + + G+L +L+ +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPL----MVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF 144
Query: 206 VTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
+T E L + ++KG+ E L ++ HRD + N+LL I DFG
Sbjct: 145 LTLEHLIXYSFQVAKGM-----EFLASRK------XIHRDLAARNILLSEKNVVKICDFG 193
Query: 266 LA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
LA + +P GD + ++MAPE + F R ++ D+++ ++LWE+ S
Sbjct: 194 LARDIXKDPDXVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFS 245
Query: 323 RCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTME 382
+S P+ D ++E + T PE ++ TM
Sbjct: 246 LGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------TML 285
Query: 383 ECWDHDAEARLSASCVVE 400
+CW + R + S +VE
Sbjct: 286 DCWHGEPSQRPTFSELVE 303
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEG 296
++ V HRD K N+ L DL I DFGLA E T GT Y+APEVL
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPEVLS- 190
Query: 297 AINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+ +D+++ +++ L V PP E
Sbjct: 191 ----KKGHSFEVDVWSIGCIMYTLL-----VGKPPFE 218
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 202 KCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAI 261
K + + L +IA+S+ K L HLH ++ +V HRD K +NVL+ +
Sbjct: 129 KGQTIPEDILGKIAVSIVKALEHLHSKL----------SVIHRDVKPSNVLINALGQVKX 178
Query: 262 ADFGLALLFEPGKPCGDTHGQV--GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
DFG++ G D + G + Y APE + +N + ++ D+++ + E
Sbjct: 179 CDFGIS-----GYLVDDVAKDIDAGCKPYXAPERINPELN-QKGYSVKSDIWSLGITXIE 232
Query: 320 LA 321
LA
Sbjct: 233 LA 234
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKF-----KNENVAVKIF----LMQDKQSWQSEQEIFKL 160
G + ++L+E G FG V + ++ K +VAVK L Q + +E+ +
Sbjct: 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 75
Query: 161 PHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
++H N++R G + ++T GSL D L+ + L R A+ +
Sbjct: 76 HSLDHRNLIRLYGV-----VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 130
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
++G+ +L + HRD + N+LL + I DFGL P D
Sbjct: 131 AEGMGYLESK-----------RFIHRDLAARNLLLATRDLVKIGDFGLMRAL----PQND 175
Query: 279 THGQVGTRRYM-----APEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H + R + APE L+ FS + D + + LWE+
Sbjct: 176 DHYVMQEHRKVPFAWCAPESLK-TRTFSHAS----DTWMFGVTLWEM 217
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 75/197 (38%), Gaps = 25/197 (12%)
Query: 106 SPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPH-ME 164
+P ++V +G FG V A+ K E V + ++Q K + ++E H M
Sbjct: 32 NPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEE----KHIMS 87
Query: 165 HDNILRYIGAEKRGESIHTEF------WLITAYHERGSLCDFLKCNIVTWEQLCRI-ALS 217
N+L +H F + + Y G L L+ E R A
Sbjct: 88 ERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAE 147
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCG 277
++ L +LH + +RD K N+LL S + DFGL E +
Sbjct: 148 IASALGYLHSL-----------NIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNS 194
Query: 278 DTHGQVGTRRYMAPEVL 294
T GT Y+APEVL
Sbjct: 195 TTSTFCGTPEYLAPEVL 211
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 26/183 (14%)
Query: 121 AQGRFGAVWKAKFKNENV--AVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRG 178
+G FG V + K K AVK ++ + +E+ + I+ GA + G
Sbjct: 83 GRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV----EELVACAGLSSPRIVPLYGAVREG 138
Query: 179 ESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMS-KGLMHLHEEILPNKADSY 237
++ L+ E GSL +K E L + +GL +LH
Sbjct: 139 PWVNIFMELL----EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR--------- 185
Query: 238 KPAVAHRDFKSNNVLLKSDLT-AAIADFGLALLFEP---GKPCGDTHGQVGTRRYMAPEV 293
+ H D K++NVLL SD + AA+ DFG AL +P GK GT +MAPEV
Sbjct: 186 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 294 LEG 296
+ G
Sbjct: 244 VMG 246
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKF-----KNENVAVKIF----LMQDKQSWQSEQEIFKL 160
G + ++L+E G FG V + ++ K +VAVK L Q + +E+ +
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 161 PHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
++H N++R G + ++T GSL D L+ + L R A+ +
Sbjct: 66 HSLDHRNLIRLYGV-----VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
++G+ +L + HRD + N+LL + I DFGL P D
Sbjct: 121 AEGMGYLESK-----------RFIHRDLAARNLLLATRDLVKIGDFGLMRAL----PQND 165
Query: 279 THGQVGTRRYM-----APEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H + R + APE L+ FS + D + + LWE+
Sbjct: 166 DHYVMQEHRKVPFAWCAPESLK-TRTFSHAS----DTWMFGVTLWEM 207
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 26/183 (14%)
Query: 121 AQGRFGAVWKAKFKNENV--AVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRG 178
+G FG V + K K AVK ++ + +E+ + I+ GA + G
Sbjct: 67 GRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV----EELVACAGLSSPRIVPLYGAVREG 122
Query: 179 ESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMS-KGLMHLHEEILPNKADSY 237
++ L+ E GSL +K E L + +GL +LH
Sbjct: 123 PWVNIFMELL----EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR--------- 169
Query: 238 KPAVAHRDFKSNNVLLKSDLT-AAIADFGLALLFEP---GKPCGDTHGQVGTRRYMAPEV 293
+ H D K++NVLL SD + AA+ DFG AL +P GK GT +MAPEV
Sbjct: 170 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 294 LEG 296
+ G
Sbjct: 228 VMG 230
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKF-----KNENVAVKIF----LMQDKQSWQSEQEIFKL 160
G + ++L+E G FG V + ++ K +VAVK L Q + +E+ +
Sbjct: 10 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 69
Query: 161 PHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
++H N++R G + ++T GSL D L+ + L R A+ +
Sbjct: 70 HSLDHRNLIRLYGV-----VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 124
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
++G+ +L + HRD + N+LL + I DFGL P D
Sbjct: 125 AEGMGYLESK-----------RFIHRDLAARNLLLATRDLVKIGDFGLMRAL----PQND 169
Query: 279 THGQVGTRRYM-----APEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H + R + APE L+ FS + D + + LWE+
Sbjct: 170 DHYVMQEHRKVPFAWCAPESLK-TRTFSHAS----DTWMFGVTLWEM 211
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 26/183 (14%)
Query: 121 AQGRFGAVWKAKFKNENV--AVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRG 178
+G FG V + K K AVK ++ + +E+ + I+ GA + G
Sbjct: 81 GRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV----EELVACAGLSSPRIVPLYGAVREG 136
Query: 179 ESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMS-KGLMHLHEEILPNKADSY 237
++ L+ E GSL +K E L + +GL +LH
Sbjct: 137 PWVNIFMELL----EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR--------- 183
Query: 238 KPAVAHRDFKSNNVLLKSDLT-AAIADFGLALLFEP---GKPCGDTHGQVGTRRYMAPEV 293
+ H D K++NVLL SD + AA+ DFG AL +P GK GT +MAPEV
Sbjct: 184 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 294 LEG 296
+ G
Sbjct: 242 VMG 244
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 93/255 (36%), Gaps = 43/255 (16%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E R + L +LH E
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE- 267
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 268 ---------KNVVYRDLKLENLMLDKDGHIKITDFGLC---KEGIKDGATMKTFCGTPEY 315
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 316 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 354
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVERGMLALCD 408
E + E ++ +++R P T A L + D + RL + ++
Sbjct: 355 EKLFELILMEEIR--FPRTLGPEAKSL-----LSGLLKKDPKQRLGGGSEDAKEIMQHRF 407
Query: 409 TMEECWDHDAEARLS 423
W H E +LS
Sbjct: 408 FAGIVWQHVYEKKLS 422
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 222 LMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHG 281
L HLH + + H D K N+ L + DFGL L E G G
Sbjct: 170 LAHLHSQ-----------GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGT-AGAGEV 215
Query: 282 QVGTRRYMAPEVLEGAINFSRDAF---LRIDMYACALVL 317
Q G RYMAPE+L+G+ + D F L I AC + L
Sbjct: 216 QEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMEL 254
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRYMAPEVLE 295
++ V HRD K N+ L DL I DFGLA E G+ + GT Y+APEVL
Sbjct: 132 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPNYIAPEVLS 188
Query: 296 GAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+ +D+++ +++ L V PP E
Sbjct: 189 -----KKGHSFEVDVWSIGCIMYTLL-----VGKPPFE 216
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKF-----KNENVAVKIF----LMQDKQSWQSEQEIFKL 160
G + ++L+E G FG V + ++ K +VAVK L Q + +E+ +
Sbjct: 10 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 69
Query: 161 PHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
++H N++R G + ++T GSL D L+ + L R A+ +
Sbjct: 70 HSLDHRNLIRLYGV-----VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 124
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
++G+ +L + HRD + N+LL + I DFGL P D
Sbjct: 125 AEGMGYLESK-----------RFIHRDLAARNLLLATRDLVKIGDFGLMRAL----PQND 169
Query: 279 THGQVGTRRYM-----APEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H + R + APE L+ FS + D + + LWE+
Sbjct: 170 DHYVMQEHRKVPFAWCAPESLK-TRTFSHAS----DTWMFGVTLWEM 211
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 44/239 (18%)
Query: 94 VPTLEPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQSWQ 152
VP H PS + V+ G+FG V + N++ VA+K K+
Sbjct: 15 VPRGSLHMVIDPS------ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI----KEGSM 64
Query: 153 SEQEIFK----LPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKC--NIV 206
SE + + + + H +++ G I L+ + E G L D+L+ +
Sbjct: 65 SEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI----CLVFEFMEHGCLSDYLRTQRGLF 120
Query: 207 TWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL 266
E L + L + +G+ +L E V HRD + N L+ + ++DFG+
Sbjct: 121 AAETLLGMCLDVCEGMAYLEE-----------ACVIHRDLAARNCLVGENQVIKVSDFGM 169
Query: 267 ALLFEPGKPCGDTHGQVGTR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ T GT+ ++ +PEV +FSR + + D+++ +++WE+ S
Sbjct: 170 TRFVLDDQYTSST----GTKFPVKWASPEVF----SFSRYS-SKSDVWSFGVLMWEVFS 219
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 38/209 (18%)
Query: 98 EPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQ----------D 147
E H + PS +L++V QG FG V+ K + + A +++ M+ D
Sbjct: 16 EGHEKADPS------QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD 69
Query: 148 KQSWQSEQEIFKLPHMEHDNILR-YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV 206
+ + E++I L + H I++ + + G+ +LI + G L L ++
Sbjct: 70 RVRTKMERDI--LVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVM 122
Query: 207 TWEQLCRIALS-MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
E+ + L+ ++ L HLH + +RD K N+LL + + DFG
Sbjct: 123 FTEEDVKFYLAELALALDHLHS-----------LGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
L+ E + GT YMAPEV+
Sbjct: 172 LSK--ESIDHEKKAYSFCGTVEYMAPEVV 198
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 93/255 (36%), Gaps = 43/255 (16%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E R + L +LH E
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE- 127
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 128 ---------KNVVYRDLKLENLMLDKDGHIKITDFGLC---KEGIKDGATMKXFCGTPEY 175
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 176 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 214
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVERGMLALCD 408
E + E ++ +++R P T A L + D + RL + ++
Sbjct: 215 EKLFELILMEEIR--FPRTLGPEAKSL-----LSGLLKKDPKQRLGGGSEDAKEIMQHRF 267
Query: 409 TMEECWDHDAEARLS 423
W H E +LS
Sbjct: 268 FAGIVWQHVYEKKLS 282
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 110 GCRSIQLVEVKAQGRFGAVWKAKF-----KNENVAVKIF----LMQDKQSWQSEQEIFKL 160
G + ++L+E G FG V + ++ K +VAVK L Q + +E+ +
Sbjct: 6 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65
Query: 161 PHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNI--VTWEQLCRIALSM 218
++H N++R G + ++T GSL D L+ + L R A+ +
Sbjct: 66 HSLDHRNLIRLYGV-----VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV 120
Query: 219 SKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
++G+ +L + HRD + N+LL + I DFGL P D
Sbjct: 121 AEGMGYLESK-----------RFIHRDLAARNLLLATRDLVKIGDFGLMRAL----PQND 165
Query: 279 THGQVGTRRYM-----APEVLEGAINFSRDAFLRIDMYACALVLWEL 320
H + R + APE L+ FS + D + + LWE+
Sbjct: 166 DHYVMQEHRKVPFAWCAPESLK-TRTFSHAS----DTWMFGVTLWEM 207
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRYMAPEVLEGAIN 299
V HRD K N+ L DL I DFGLA E G+ + GT Y+APEVL
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPNYIAPEVLS---- 212
Query: 300 FSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+ +D+++ +++ L V PP E
Sbjct: 213 -KKGHSFEVDVWSIGCIMYTLL-----VGKPPFE 240
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 48/243 (19%)
Query: 160 LPHMEHDNILRYIGAEKRGESIHTEFW-LITAYHERGSLCDFLKCNI-VTWEQLCRIALS 217
+ +++ I+R IG E W L+ E G L +L+ N V + + +
Sbjct: 66 MQQLDNPYIVRMIGI------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKP 275
+S G+ +L E HRD + NVLL + A I+DFGL AL +
Sbjct: 120 VSMGMKYLEE-----------SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 276 CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
THG+ + Y APE IN+ + + + D+++ +++WE S P YR
Sbjct: 169 KAQTHGKWPVKWY-APE----CINYYKFSS-KSDVWSFGVLMWE----AFSYGQKP--YR 216
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+EV A++ K R P + + D M CW +D E R
Sbjct: 217 GMKGSEV----------TAMLEKGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGF 261
Query: 396 SCV 398
+ V
Sbjct: 262 AAV 264
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 97/219 (44%), Gaps = 38/219 (17%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNI 168
+ V+ G+FG V + N++ VA+K ++ SE++ + + + H +
Sbjct: 9 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKC--NIVTWEQLCRIALSMSKGLMHLH 226
++ G I L+ + E G L D+L+ + E L + L + +G+ +L
Sbjct: 65 VQLYGVCLEQAPI----CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
E +V HRD + N L+ + ++DFG+ + T GT+
Sbjct: 121 E-----------ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTK 165
Query: 287 ---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ +PEV +FSR + + D+++ +++WE+ S
Sbjct: 166 FPVKWASPEVF----SFSRYS-SKSDVWSFGVLMWEVFS 199
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRYMAPEVLEGAIN 299
V HRD K N+ L DL I DFGLA E G+ + GT Y+APEVL
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD---GERKKVLCGTPNYIAPEVLS---- 214
Query: 300 FSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+ +D+++ +++ L V PP E
Sbjct: 215 -KKGHSFEVDVWSIGCIMYTLL-----VGKPPFE 242
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 44/246 (17%)
Query: 105 PSPQQGCRSIQLVE-VKAQGRFG-AVWKAKFKNENVAVK--------IFLMQDKQSWQSE 154
P+ +Q +++ + E + G G V++ F+ VAVK I LM+ K +S+
Sbjct: 7 PNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD 66
Query: 155 QEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI 214
+H N++RY +E ++ L +L D ++ V+ E L
Sbjct: 67 ---------DHPNVIRYYCSETTDRFLYIALELCNL-----NLQDLVESKNVSDENL--- 109
Query: 215 ALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS-------------DLTAAI 261
L + L +I A + + HRD K N+L+ + +L I
Sbjct: 110 KLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 169
Query: 262 ADFGLALLFEPGKPC--GDTHGQVGTRRYMAPEVLEGAINF--SRDAFLRIDMYACALVL 317
+DFGL + G+ + + GT + APE+LE + N R ID+++ V
Sbjct: 170 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVF 229
Query: 318 WELASR 323
+ + S+
Sbjct: 230 YYILSK 235
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 125/309 (40%), Gaps = 74/309 (23%)
Query: 121 AQGRFGAVWKAKF-------KNENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHD-NI 168
+G FG V +A VAVK+ + ++ SE +I L H+ H N+
Sbjct: 36 GRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKI--LIHIGHHLNV 93
Query: 169 LRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKC-------------NIVTWEQLCRI 214
+ +GA K G + +I + + G+L +L+ + +T E L
Sbjct: 94 VNLLGACTKPGGPL----MVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 215 ALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA--LLFEP 272
+ ++KG+ E L ++ HRD + N+LL I DFGLA + +P
Sbjct: 150 SFQVAKGM-----EFLASRK------XIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 198
Query: 273 GKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPP 331
GD + ++MAPE + F R ++ D+++ ++LWE+ S +S
Sbjct: 199 DYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGAS----- 245
Query: 332 GEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEA 391
P+ D ++E + T PE ++ TM +CW +
Sbjct: 246 -----PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------TMLDCWHGEPSQ 290
Query: 392 RLSASCVVE 400
R + S +VE
Sbjct: 291 RPTFSELVE 299
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 48/243 (19%)
Query: 160 LPHMEHDNILRYIGAEKRGESIHTEFW-LITAYHERGSLCDFLKCNI-VTWEQLCRIALS 217
+ +++ I+R IG E W L+ E G L +L+ N V + + +
Sbjct: 82 MQQLDNPYIVRMIGI------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKP 275
+S G+ +L E HRD + NVLL + A I+DFGL AL +
Sbjct: 136 VSMGMKYLEE-----------SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 276 CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
THG+ + Y APE IN+ + + + D+++ +++WE S
Sbjct: 185 KAQTHGKWPVKWY-APE----CINYYKFSS-KSDVWSFGVLMWEAFSYGQK--------- 229
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
P+ G + A++ K R P + + D M CW +D E R
Sbjct: 230 -PYRGMKGSEVT------AMLEKGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGF 277
Query: 396 SCV 398
+ V
Sbjct: 278 AAV 280
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 48/243 (19%)
Query: 160 LPHMEHDNILRYIGAEKRGESIHTEFW-LITAYHERGSLCDFLKCNI-VTWEQLCRIALS 217
+ +++ I+R IG E W L+ E G L +L+ N V + + +
Sbjct: 82 MQQLDNPYIVRMIGI------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKP 275
+S G+ +L E HRD + NVLL + A I+DFGL AL +
Sbjct: 136 VSMGMKYLEE-----------SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 276 CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
THG+ + Y APE IN+ + + + D+++ +++WE S
Sbjct: 185 KAQTHGKWPVKWY-APE----CINYYKFSS-KSDVWSFGVLMWEAFSYGQK--------- 229
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
P+ G + A++ K R P + + D M CW +D E R
Sbjct: 230 -PYRGMKGSEVT------AMLEKGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGF 277
Query: 396 SCV 398
+ V
Sbjct: 278 AAV 280
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 93/255 (36%), Gaps = 43/255 (16%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E R + L +LH E
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE- 270
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 271 ---------KNVVYRDLKLENLMLDKDGHIKITDFGLC---KEGIKDGATMKTFCGTPEY 318
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 319 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 357
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVERGMLALCD 408
E + E ++ +++R P T A L + D + RL + ++
Sbjct: 358 EKLFELILMEEIR--FPRTLGPEAKSL-----LSGLLKKDPKQRLGGGSEDAKEIMQHRF 410
Query: 409 TMEECWDHDAEARLS 423
W H E +LS
Sbjct: 411 FAGIVWQHVYEKKLS 425
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 137 NVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGS 196
V K L++ Q + EI +++ +++ + G + + + +++ R S
Sbjct: 73 KVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFV----YVVLEICRRRS 128
Query: 197 LCDFLKCNIVTWEQLCRIALSMS-KGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS 255
L + K E R + + +G+ +LH V HRD K N+ L
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-----------RVIHRDLKLGNLFLND 177
Query: 256 DLTAAIADFGLALLFE-PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACA 314
D+ I DFGLA E G+ D GT Y+APEVL + +D+++
Sbjct: 178 DMDVKIGDFGLATKIEFDGERKKDL---CGTPNYIAPEVL-----CKKGHSFEVDIWSLG 229
Query: 315 LVLWELASRCSSVSPPPGE 333
+L+ L V PP E
Sbjct: 230 CILYTLL-----VGKPPFE 243
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 93/255 (36%), Gaps = 43/255 (16%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E R + L +LH E
Sbjct: 70 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE- 128
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 129 ---------KNVVYRDLKLENLMLDKDGHIKITDFGLC---KEGIKDGATMKXFCGTPEY 176
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 177 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 215
Query: 349 EDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVERGMLALCD 408
E + E ++ +++R P T A L + D + RL + ++
Sbjct: 216 EKLFELILMEEIR--FPRTLGPEAKSL-----LSGLLKKDPKQRLGGGSEDAKEIMQHRF 268
Query: 409 TMEECWDHDAEARLS 423
W H E +LS
Sbjct: 269 FAGIVWQHVYEKKLS 283
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 78/320 (24%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
++L + +G FG V +A VAVK+ + ++ SE +I L H
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI--LIH 77
Query: 163 MEHD-NILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKC----------------- 203
+ H N++ +GA K G + +IT + + G+L +L+
Sbjct: 78 IGHHLNVVNLLGACTKPGGPL----MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 134 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 182
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 234
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 235 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 274
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 275 MLDCWHGEPSQRPTFSELVE 294
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFE-PGKPCGDTHGQVGTRRYMAPEVLEGAIN 299
V HRD K N+ L D+ I DFGLA E G+ D GT Y+APEVL
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYIAPEVL----- 198
Query: 300 FSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
+ +D+++ +L+ L V PP E
Sbjct: 199 CKKGHSFEVDIWSLGCILYTLL-----VGKPPFE 227
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LI G L D++ K NI + + L + ++KG+ +L
Sbjct: 82 CRLLGI-----CLTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 135
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFG A L G + H + G
Sbjct: 136 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGK 182
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 183 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 111 CRSIQLVEVKAQ---GRFGAVWKAK-FKNEN--VAVKIFLMQDKQS---WQSEQEIFKLP 161
CR+ Q E A+ G +G V+KA+ KN VA+K +Q + + +E+ L
Sbjct: 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 162 HME---HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN---IVTWEQLCRIA 215
H+E H N++R + + H L +L V E + +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 216 LSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP 275
+ +GL LH V HRD K N+L+ S +ADFGLA ++
Sbjct: 127 FQLLRGLDFLHSH-----------RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 276 CGDTHGQVGTRRYMAPEVL 294
V T Y APEVL
Sbjct: 176 LTSV---VVTLWYRAPEVL 191
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 22 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 81
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LI G L D++ K NI + + L + ++KG+ +L
Sbjct: 82 CRLLGI-----CLTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 135
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFG A L G + H + G
Sbjct: 136 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGK 182
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 183 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 38/209 (18%)
Query: 98 EPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQ----------D 147
E H + PS +L++V QG FG V+ K + + A +++ M+ D
Sbjct: 17 EGHEKADPS------QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD 70
Query: 148 KQSWQSEQEIFKLPHMEHDNILR-YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV 206
+ + E++I L + H I++ + + G+ +LI + G L L ++
Sbjct: 71 RVRTKMERDI--LVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVM 123
Query: 207 TWEQLCRIALS-MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
E+ + L+ ++ L HLH + +RD K N+LL + + DFG
Sbjct: 124 FTEEDVKFYLAELALALDHLHS-----------LGIIYRDLKPENILLDEEGHIKLTDFG 172
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
L+ E + GT YMAPEV+
Sbjct: 173 LSK--ESIDHEKKAYSFCGTVEYMAPEVV 199
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 38/209 (18%)
Query: 98 EPHPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQ----------D 147
E H + PS +L++V QG FG V+ K + + A +++ M+ D
Sbjct: 16 EGHEKADPS------QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD 69
Query: 148 KQSWQSEQEIFKLPHMEHDNILR-YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIV 206
+ + E++I L + H I++ + + G+ +LI + G L L ++
Sbjct: 70 RVRTKMERDI--LVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVM 122
Query: 207 TWEQLCRIALS-MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
E+ + L+ ++ L HLH + +RD K N+LL + + DFG
Sbjct: 123 FTEEDVKFYLAELALALDHLHS-----------LGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 266 LALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
L+ E + GT YMAPEV+
Sbjct: 172 LSK--ESIDHEKKAYSFCGTVEYMAPEVV 198
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 48/243 (19%)
Query: 160 LPHMEHDNILRYIGAEKRGESIHTEFW-LITAYHERGSLCDFLKCNI-VTWEQLCRIALS 217
+ +++ I+R IG E W L+ E G L +L+ N V + + +
Sbjct: 66 MQQLDNPYIVRMIGI------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKP 275
+S G+ +L E HRD + NVLL + A I+DFGL AL +
Sbjct: 120 VSMGMKYLEE-----------SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 276 CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
THG+ + Y APE IN+ + + + D+++ +++WE S P YR
Sbjct: 169 KAQTHGKWPVKWY-APE----CINYYKFSS-KSDVWSFGVLMWE----AFSYGQKP--YR 216
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+EV A++ K R P + + D M CW +D E R
Sbjct: 217 GMKGSEV----------TAMLEKGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGF 261
Query: 396 SCV 398
+ V
Sbjct: 262 AAV 264
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 48/243 (19%)
Query: 160 LPHMEHDNILRYIGAEKRGESIHTEFW-LITAYHERGSLCDFLKCNI-VTWEQLCRIALS 217
+ +++ I+R IG E W L+ E G L +L+ N V + + +
Sbjct: 80 MQQLDNPYIVRMIGI------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 133
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKP 275
+S G+ +L E HRD + NVLL + A I+DFGL AL +
Sbjct: 134 VSMGMKYLEE-----------SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 276 CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
THG+ + Y APE IN+ + + + D+++ +++WE S
Sbjct: 183 KAQTHGKWPVKWY-APE----CINYYKFSS-KSDVWSFGVLMWEAFSYGQK--------- 227
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
P+ G + A++ K R P + + D M CW +D E R
Sbjct: 228 -PYRGMKGSEVT------AMLEKGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGF 275
Query: 396 SCV 398
+ V
Sbjct: 276 AAV 278
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 48/243 (19%)
Query: 160 LPHMEHDNILRYIGAEKRGESIHTEFW-LITAYHERGSLCDFLKCNI-VTWEQLCRIALS 217
+ +++ I+R IG E W L+ E G L +L+ N V + + +
Sbjct: 72 MQQLDNPYIVRMIGI------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 125
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKP 275
+S G+ +L E HRD + NVLL + A I+DFGL AL +
Sbjct: 126 VSMGMKYLEE-----------SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 276 CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
THG+ + Y APE IN+ + + + D+++ +++WE S P YR
Sbjct: 175 KAQTHGKWPVKWY-APE----CINYYKFSS-KSDVWSFGVLMWE----AFSYGQKP--YR 222
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+EV A++ K R P + + D M CW +D E R
Sbjct: 223 GMKGSEV----------TAMLEKGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGF 267
Query: 396 SCV 398
+ V
Sbjct: 268 AAV 270
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 99/222 (44%), Gaps = 37/222 (16%)
Query: 117 VEVKAQGRFGAVWKAKFKNENVAVKIFL----MQDKQSWQSEQEI----FKLPHMEHDNI 168
++V G FG V+K + E VKI + +++ S ++ +EI + + +++ ++
Sbjct: 24 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 83
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFL---KCNIVTWEQLCRIALSMSKGLMHL 225
R +G + + LI G L D++ K NI + + L + ++KG+ +L
Sbjct: 84 CRLLGI-----CLTSTVQLIMQLMPFGCLLDYVREHKDNIGS-QYLLNWCVQIAKGMNYL 137
Query: 226 HEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGT 285
+ L HRD + NVL+K+ I DFG A L G + H + G
Sbjct: 138 EDRRL-----------VHRDLAARNVLVKTPQHVKITDFGRAKLL--GAEEKEYHAEGGK 184
Query: 286 R--RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCS 325
++MA E + R + D+++ + +WEL + S
Sbjct: 185 VPIKWMALESI-----LHRIYTHQSDVWSYGVTVWELMTFGS 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 84/235 (35%), Gaps = 45/235 (19%)
Query: 116 LVEVKAQGRFGA--VWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIG 173
V+ G FG + + K E VAVK ++EI + H NI+R+
Sbjct: 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRF-- 81
Query: 174 AEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
K T +I Y G L +E++C +++L
Sbjct: 82 --KEVILTPTHLAIIMEYASGGEL----------YERICNAGRFSEDEARFFFQQLLSGV 129
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLT--AAIADFGLALLFEPGKPCGDTHGQ----VGTRR 287
+ + + HRD K N LL I DFG + H Q VGT
Sbjct: 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYS-------KSSVLHSQPKSTVGTPA 182
Query: 288 YMAPEVL-----EGAINFSRDAFLRIDMYACALVLWELASRCSSVSPP--PGEYR 335
Y+APEVL +G I D+++C + L+ + P P +YR
Sbjct: 183 YIAPEVLLRQEYDGKIA---------DVWSCGVTLYVMLVGAYPFEDPEEPRDYR 228
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 78/320 (24%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
++L + +G FG V +A VAVK+ + ++ SE +I L H
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI--LIH 77
Query: 163 MEHD-NILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKC----------------- 203
+ H N++ +GA K G + +IT + + G+L +L+
Sbjct: 78 IGHHLNVVNLLGACTKPGGPL----MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 134 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 182
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 234
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 235 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 274
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 275 MLDCWHGEPSQRPTFSELVE 294
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 48/246 (19%)
Query: 160 LPHMEHDNILRYIGAEKRGESIHTEFW-LITAYHERGSLCDFLKCNI-VTWEQLCRIALS 217
+ +++ I+R IG E W L+ E G L +L+ N V + + +
Sbjct: 424 MQQLDNPYIVRMIGI------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 477
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKP 275
+S G+ +L E HRD + NVLL + A I+DFGL AL +
Sbjct: 478 VSMGMKYLEES-----------NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 276 CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
THG+ + Y APE IN+ + + + D+++ +++WE S P YR
Sbjct: 527 KAQTHGKWPVKWY-APE----CINYYKFSS-KSDVWSFGVLMWE----AFSYGQKP--YR 574
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+EV A++ K R P + + D M CW +D E R
Sbjct: 575 GMKGSEV----------TAMLEKGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGF 619
Query: 396 SCVVER 401
+ V R
Sbjct: 620 AAVELR 625
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 130/320 (40%), Gaps = 78/320 (24%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPH 162
++L + +G FG V +A VAVK+ + ++ SE +I L H
Sbjct: 20 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI--LIH 77
Query: 163 MEHD-NILRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKC----------------- 203
+ H N++ +GA K G + +IT + + G+L +L+
Sbjct: 78 IGHHLNVVNLLGACTKPGGPL----MVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 134 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 182
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 183 FGLARDIYKDPDYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 234
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 235 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 274
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 275 MLDCWHGEPSQRPTFSELVE 294
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 48/246 (19%)
Query: 160 LPHMEHDNILRYIGAEKRGESIHTEFW-LITAYHERGSLCDFLKCNI-VTWEQLCRIALS 217
+ +++ I+R IG E W L+ E G L +L+ N V + + +
Sbjct: 425 MQQLDNPYIVRMIGI------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 478
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKP 275
+S G+ +L E HRD + NVLL + A I+DFGL AL +
Sbjct: 479 VSMGMKYLEES-----------NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 276 CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
THG+ + Y APE IN+ + + + D+++ +++WE S P YR
Sbjct: 528 KAQTHGKWPVKWY-APE----CINYYKFSS-KSDVWSFGVLMWE----AFSYGQKP--YR 575
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+EV A++ K R P + + D M CW +D E R
Sbjct: 576 GMKGSEV----------TAMLEKGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGF 620
Query: 396 SCVVER 401
+ V R
Sbjct: 621 AAVELR 626
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 38/219 (17%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNI 168
+ V+ G+FG V + N++ VA+K ++ SE++ + + + H +
Sbjct: 7 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKC--NIVTWEQLCRIALSMSKGLMHLH 226
++ G I L+ + E G L D+L+ + E L + L + +G+ +L
Sbjct: 63 VQLYGVCLEQAPI----CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
E V HRD + N L+ + ++DFG+ + T GT+
Sbjct: 119 E-----------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTK 163
Query: 287 ---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ +PEV +FSR + + D+++ +++WE+ S
Sbjct: 164 FPVKWASPEVF----SFSRYS-SKSDVWSFGVLMWEVFS 197
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 83/210 (39%), Gaps = 40/210 (19%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E+ R + L +LH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 125 ----------DVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTFCGTPEY 171
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 172 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 210
Query: 349 EDMQEAVVHKKLR--PTL-PETWKQHAGML 375
E + E ++ +++R TL PE AG+L
Sbjct: 211 ERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 28/198 (14%)
Query: 137 NVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGS 196
V K L++ Q + EI +++ +++ + G + + + +++ R S
Sbjct: 73 KVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFV----YVVLEICRRRS 128
Query: 197 LCDFLKCNIVTWEQLCRIALSMS-KGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS 255
L + K E R + + +G+ +LH V HRD K N+ L
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-----------RVIHRDLKLGNLFLND 177
Query: 256 DLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACAL 315
D+ I DFGLA E T GT Y+APEVL + +D+++
Sbjct: 178 DMDVKIGDFGLATKIEFDGERKKT--LCGTPNYIAPEVL-----CKKGHSFEVDIWSLGC 230
Query: 316 VLWELASRCSSVSPPPGE 333
+L+ L V PP E
Sbjct: 231 ILYTLL-----VGKPPFE 243
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 48/243 (19%)
Query: 160 LPHMEHDNILRYIGAEKRGESIHTEFW-LITAYHERGSLCDFLKCNI-VTWEQLCRIALS 217
+ +++ I+R IG E W L+ E G L +L+ N V + + +
Sbjct: 60 MQQLDNPYIVRMIGI------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 113
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKP 275
+S G+ +L E HRD + NVLL + A I+DFGL AL +
Sbjct: 114 VSMGMKYLEE-----------SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 276 CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
THG+ + Y APE IN+ + + + D+++ +++WE S P YR
Sbjct: 163 KAQTHGKWPVKWY-APE----CINYYKFSS-KSDVWSFGVLMWE----AFSYGQKP--YR 210
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+EV A++ K R P + + D M CW +D E R
Sbjct: 211 GMKGSEV----------TAMLEKGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGF 255
Query: 396 SCV 398
+ V
Sbjct: 256 AAV 258
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 83/210 (39%), Gaps = 40/210 (19%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E+ R + L +LH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 125 ----------DVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXFCGTPEY 171
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 172 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 210
Query: 349 EDMQEAVVHKKLR--PTL-PETWKQHAGML 375
E + E ++ +++R TL PE AG+L
Sbjct: 211 ERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 83/210 (39%), Gaps = 40/210 (19%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E+ R + L +LH
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 129
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 130 ----------DVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXFCGTPEY 176
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 177 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 215
Query: 349 EDMQEAVVHKKLR--PTL-PETWKQHAGML 375
E + E ++ +++R TL PE AG+L
Sbjct: 216 ERLFELILMEEIRFPRTLSPEAKSLLAGLL 245
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 83/210 (39%), Gaps = 40/210 (19%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E+ R + L +LH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 125 ----------DVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXFCGTPEY 171
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 172 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 210
Query: 349 EDMQEAVVHKKLR--PTL-PETWKQHAGML 375
E + E ++ +++R TL PE AG+L
Sbjct: 211 ERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 48/243 (19%)
Query: 160 LPHMEHDNILRYIGAEKRGESIHTEFW-LITAYHERGSLCDFLKCNI-VTWEQLCRIALS 217
+ +++ I+R IG E W L+ E G L +L+ N V + + +
Sbjct: 62 MQQLDNPYIVRMIGI------CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 115
Query: 218 MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKP 275
+S G+ +L E HRD + NVLL + A I+DFGL AL +
Sbjct: 116 VSMGMKYLEE-----------SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 276 CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
THG+ + Y APE IN+ + + + D+++ +++WE S P YR
Sbjct: 165 KAQTHGKWPVKWY-APE----CINYYKFSS-KSDVWSFGVLMWE----AFSYGQKP--YR 212
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSA 395
+EV A++ K R P + + D M CW +D E R
Sbjct: 213 GMKGSEV----------TAMLEKGERMGCPAGCPRE-----MYDLMNLCWTYDVENRPGF 257
Query: 396 SCV 398
+ V
Sbjct: 258 AAV 260
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 83/210 (39%), Gaps = 40/210 (19%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E+ R + L +LH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 125 ----------DVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKXFCGTPEY 171
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 172 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 210
Query: 349 EDMQEAVVHKKLR--PTL-PETWKQHAGML 375
E + E ++ +++R TL PE AG+L
Sbjct: 211 ERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 38/219 (17%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNI 168
+ V+ G+FG V + N++ VA+K ++ SE++ + + + H +
Sbjct: 9 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKC--NIVTWEQLCRIALSMSKGLMHLH 226
++ G I L+ + E G L D+L+ + E L + L + +G+ +L
Sbjct: 65 VQLYGVCLEQAPI----CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
E V HRD + N L+ + ++DFG+ + T GT+
Sbjct: 121 E-----------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTK 165
Query: 287 ---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ +PEV +FSR + + D+++ +++WE+ S
Sbjct: 166 FPVKWASPEVF----SFSRYS-SKSDVWSFGVLMWEVFS 199
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 96/219 (43%), Gaps = 38/219 (17%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNEN-VAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNI 168
+ V+ G+FG V + N++ VA+K ++ SE++ + + + H +
Sbjct: 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKL 67
Query: 169 LRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKC--NIVTWEQLCRIALSMSKGLMHLH 226
++ G I L+ + E G L D+L+ + E L + L + +G+ +L
Sbjct: 68 VQLYGVCLEQAPIC----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 123
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR 286
E V HRD + N L+ + ++DFG+ + T GT+
Sbjct: 124 E-----------ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST----GTK 168
Query: 287 ---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ +PEV +FSR + + D+++ +++WE+ S
Sbjct: 169 FPVKWASPEVF----SFSRYS-SKSDVWSFGVLMWEVFS 202
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 20/189 (10%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNIL---- 169
++++V +G FG V K KN +I+ M+ W+ + E ++L
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTE---RIYAMKILNKWEMLKRAETACFREERDVLVNGD 132
Query: 170 -RYIGAEKRGESIHTEFWLITAYHERGSLCDFL-KCNIVTWEQLCRIALSMSKGLMHLHE 227
++I A +L+ Y+ G L L K E + R +
Sbjct: 133 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG---------- 182
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
E++ ++ HRD K +NVLL + +ADFG L + VGT
Sbjct: 183 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA-VGTPD 241
Query: 288 YMAPEVLEG 296
Y++PE+L+
Sbjct: 242 YISPEILQA 250
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 105/256 (41%), Gaps = 58/256 (22%)
Query: 112 RSIQLVEVKAQGRFGAVWKA-----KFKNENVAVKIFLMQDKQSWQSEQEIFK----LPH 162
+++ L + +G FG V KA K + V + ++++ S +++ L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN------------------ 204
+ H ++++ GA S LI Y + GSL FL+ +
Sbjct: 83 VNHPHVIKLYGAC----SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 205 -------IVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDL 257
+T L A +S+G+ +L E ++ HRD + N+L+
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEM-----------SLVHRDLAARNILVAEGR 187
Query: 258 TAAIADFGLAL-LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALV 316
I+DFGL+ ++E + G++ ++MA E L I ++ D+++ ++
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRSQGRIPV-KWMAIESLFDHIYTTQS-----DVWSFGVL 241
Query: 317 LWELASRCSSVSPPPG 332
LWE+ + +P PG
Sbjct: 242 LWEIVTLGG--NPYPG 255
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 83/210 (39%), Gaps = 40/210 (19%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E+ R + L +LH
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 127
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 128 ----------DVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTFCGTPEY 174
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 175 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 213
Query: 349 EDMQEAVVHKKLR--PTL-PETWKQHAGML 375
E + E ++ +++R TL PE AG+L
Sbjct: 214 ERLFELILMEEIRFPRTLSPEAKSLLAGLL 243
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 83/210 (39%), Gaps = 40/210 (19%)
Query: 171 YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-ALSMSKGLMHLHEEI 229
++ A K H + Y G L L V E+ R + L +LH
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR- 124
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRY 288
V +RD K N++L D I DFGL + G G T GT Y
Sbjct: 125 ----------DVVYRDIKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTFCGTPEY 171
Query: 289 MAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSL 348
+APEVLE D +D + +V++E+ C RLPF + DH
Sbjct: 172 LAPEVLE-----DNDYGRAVDWWGLGVVMYEMM--CG---------RLPFYNQ--DH--- 210
Query: 349 EDMQEAVVHKKLR--PTL-PETWKQHAGML 375
E + E ++ +++R TL PE AG+L
Sbjct: 211 ERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 30/199 (15%)
Query: 137 NVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGS 196
V K L++ Q + EI +++ +++ + G + + + +++ R S
Sbjct: 73 KVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFV----YVVLEICRRRS 128
Query: 197 LCDFLKCNIVTWEQLCRIALSMS-KGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS 255
L + K E R + + +G+ +LH V HRD K N+ L
Sbjct: 129 LLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-----------RVIHRDLKLGNLFLND 177
Query: 256 DLTAAIADFGLALLFEPGKPCGDTHGQV-GTRRYMAPEVLEGAINFSRDAFLRIDMYACA 314
D+ I DFGLA E G+ + GT Y+APEVL + +D+++
Sbjct: 178 DMDVKIGDFGLATKIEFD---GERKKXLCGTPNYIAPEVL-----CKKGHSFEVDIWSLG 229
Query: 315 LVLWELASRCSSVSPPPGE 333
+L+ L V PP E
Sbjct: 230 CILYTLL-----VGKPPFE 243
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 111 CRSIQLVEVKAQ---GRFGAVWKAK-FKNEN--VAVKIFLMQDKQS---WQSEQEIFKLP 161
CR+ Q E A+ G +G V+KA+ KN VA+K +Q + + +E+ L
Sbjct: 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 162 HME---HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN---IVTWEQLCRIA 215
H+E H N++R + + H L +L V E + +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 216 LSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP 275
+ +GL LH V HRD K N+L+ S +ADFGLA ++
Sbjct: 127 FQLLRGLDFLHSH-----------RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 276 CGDTHGQVGTRRYMAPEVL 294
V T Y APEVL
Sbjct: 176 LTSV---VVTLWYRAPEVL 191
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 20/189 (10%)
Query: 114 IQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNIL---- 169
++++V +G FG V K KN +I+ M+ W+ + E ++L
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTE---RIYAMKILNKWEMLKRAETACFREERDVLVNGD 148
Query: 170 -RYIGAEKRGESIHTEFWLITAYHERGSLCDFL-KCNIVTWEQLCRIALSMSKGLMHLHE 227
++I A +L+ Y+ G L L K E + R +
Sbjct: 149 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG---------- 198
Query: 228 EILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRR 287
E++ ++ HRD K +NVLL + +ADFG L + VGT
Sbjct: 199 EMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA-VGTPD 257
Query: 288 YMAPEVLEG 296
Y++PE+L+
Sbjct: 258 YISPEILQA 266
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 100/265 (37%), Gaps = 42/265 (15%)
Query: 121 AQGRFGAVWKAKFKN--ENVAVKIF--LMQDKQSWQS-EQEIFKLPHMEHDNILRYIGAE 175
+G +G V+ A KN +NVA+K + +D + +EI L ++ D I+R
Sbjct: 35 GRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLI 94
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNI-VTWEQLCRIALSMSKGLMHLHEEILPNKA 234
+ + + I L K I +T E + I ++ G +HE
Sbjct: 95 IPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES------ 148
Query: 235 DSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLF----------------EPGKPCGD 278
+ HRD K N LL D + + DFGLA EPG +
Sbjct: 149 -----GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 279 THGQ----VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEY 334
Q V TR Y APE++ N+++ ID+++ + EL + S P
Sbjct: 204 LKKQLTSHVVTRWYRAPELILLQENYTKS----IDIWSTGCIFAELLNMLQSHINDPTN- 258
Query: 335 RLPFSAEVGDHPSLEDMQEAVVHKK 359
R P P D VH+K
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEK 283
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 104/256 (40%), Gaps = 58/256 (22%)
Query: 112 RSIQLVEVKAQGRFGAVWKA-----KFKNENVAVKIFLMQDKQSWQSEQEIFK----LPH 162
+++ L + +G FG V KA K + V + ++++ S +++ L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN------------------ 204
+ H ++++ GA S LI Y + GSL FL+ +
Sbjct: 83 VNHPHVIKLYGAC----SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 205 -------IVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDL 257
+T L A +S+G+ +L E L HRD + N+L+
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKL-----------VHRDLAARNILVAEGR 187
Query: 258 TAAIADFGLAL-LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALV 316
I+DFGL+ ++E + G++ ++MA E L I ++ D+++ ++
Sbjct: 188 KMKISDFGLSRDVYEEDSXVKRSQGRIPV-KWMAIESLFDHIYTTQS-----DVWSFGVL 241
Query: 317 LWELASRCSSVSPPPG 332
LWE+ + +P PG
Sbjct: 242 LWEIVTLGG--NPYPG 255
>pdb|1BTE|A Chain A, Crystal Structure Of The Extracellular Domain Of The
Type Ii Activin Receptor
pdb|1BTE|B Chain B, Crystal Structure Of The Extracellular Domain Of The
Type Ii Activin Receptor
Length = 97
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 1 MECYDKPKCVEKRPESKKNLNFCCCEGDMCNKDFAWEP 38
+ CYD+ C+EK+ + + FCCCEG+MCN+ F++ P
Sbjct: 59 INCYDRTDCIEKKDSPE--VYFCCCEGNMCNEKFSYFP 94
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 121 AQGRFGAVWKAKFKNENVAVKIFLMQDKQSWQS------EQEIFKLPHMEHDNILRYIGA 174
+G F V++A+ + + V I ++ K +++ + E+ ++H +IL
Sbjct: 20 GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79
Query: 175 EKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKA 234
+ + +L+ G + +LK + + + + ++ MH +I+
Sbjct: 80 FEDSNYV----YLVLEMCHNGEMNRYLKNRVKPFSE------NEARHFMH---QIITGML 126
Query: 235 DSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEV 293
+ + HRD +N+LL ++ IADFGLA + P + GT Y++PE+
Sbjct: 127 YLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK--MPHEKHYTLCGTPNYISPEI 183
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 25/208 (12%)
Query: 115 QLVEVKAQGRFGA--VWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYI 172
+LV+ G FG + + K NE VAVK +K ++EI + H NI+R+
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF- 80
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
K T ++ Y G L +E++C ++++
Sbjct: 81 ---KEVILTPTHLAIVMEYASGGEL----------FERICNAGRFSEDEARFFFQQLISG 127
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLT--AAIADFGLALLFEPGKPCGDTHGQVGTRRYMA 290
+ + V HRD K N LL I FG + DT VGT Y+A
Sbjct: 128 VSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAYIA 184
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLW 318
PEVL + A D+++C + L+
Sbjct: 185 PEVLLKKEYDGKVA----DVWSCGVTLY 208
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 29/199 (14%)
Query: 111 CRSIQLVEVKAQ---GRFGAVWKAK-FKNEN--VAVKIFLMQDKQS---WQSEQEIFKLP 161
CR+ Q E A+ G +G V+KA+ KN VA+K +Q + + +E+ L
Sbjct: 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLR 66
Query: 162 HME---HDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN---IVTWEQLCRIA 215
H+E H N++R + + H L +L V E + +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 216 LSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKP 275
+ +GL LH V HRD K N+L+ S +ADFGLA ++
Sbjct: 127 FQLLRGLDFLHSH-----------RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA 175
Query: 276 CGDTHGQVGTRRYMAPEVL 294
V T Y APEVL
Sbjct: 176 LTSV---VVTLWYRAPEVL 191
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 119/309 (38%), Gaps = 71/309 (22%)
Query: 121 AQGRFGAVWKAKFKN-------ENVAVKIF----LMQDKQSWQSEQEIFKLPHMEHD-NI 168
+G FG V +A VAVK+ + ++ SE +I L H+ H N+
Sbjct: 37 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI--LIHIGHHLNV 94
Query: 169 LRYIGA-EKRGESIHTEFWLITAYHERGSLCDFLKC----------------NIVTWEQL 211
+ +GA K G + +I + + G+L +L+ + +T E L
Sbjct: 95 VNLLGACTKPGGPL----MVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 212 CRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFE 271
+ ++KG+ E L ++ HRD + N+LL I DFGLA
Sbjct: 151 ICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 272 PGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPP 331
++MAPE + F R ++ D+++ ++LWE+ S +S
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSLGAS----- 249
Query: 332 GEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEA 391
P+ D ++E + T PE ++ TM +CW +
Sbjct: 250 -----PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------TMLDCWHGEPSQ 294
Query: 392 RLSASCVVE 400
R + S +VE
Sbjct: 295 RPTFSELVE 303
>pdb|1NYS|A Chain A, Crystal Structure Of Activin A Bound To The Ecd Of Actriib
P41
pdb|1NYS|C Chain C, Crystal Structure Of Activin A Bound To The Ecd Of Actriib
P41
pdb|1NYU|A Chain A, Crystal Structure Of Activin A Bound To The Ecd Of Actriib
pdb|1NYU|C Chain C, Crystal Structure Of Activin A Bound To The Ecd Of Actriib
Length = 105
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 1 MECYDKPKCVEKRPESKKNLNFCCCEGDMCNKDFAWEPAPLPP 43
CYD+ +CV E + FCCCEG+ CN+ F P PL P
Sbjct: 64 FNCYDRQECVA--TEENPQVYFCCCEGNFCNERFTHLPEPLVP 104
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 143 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 191
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 192 FGLARDIYKDPDXVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 243
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 244 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 283
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 284 MLDCWHGEPSQRPTFSELVE 303
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 119/296 (40%), Gaps = 56/296 (18%)
Query: 121 AQGRFGAVWKAKFKNEN-----VAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNILRY 171
+G FG+V +A+ K E+ VAVK+ L D + +E + + +H ++ +
Sbjct: 32 GKGEFGSVREAQLKQEDGSFVKVAVKM-LKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 172 IGA--EKRGESIHTEFWLITAYHERGSLCDFLKCNIVT-------WEQLCRIALSMSKGL 222
+G R + +I + + G L FL + + + L R + ++ G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 223 MHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQ 282
+L HRD + N +L D+T +ADFGL+ G
Sbjct: 151 EYLSSR-----------NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCAS 199
Query: 283 VGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEV 342
+++A E L + D++A + +WE+ +R +P G +AE+
Sbjct: 200 KLPVKWLALESLADNLYTVHS-----DVWAFGVTMWEIMTRGQ--TPYAGIE----NAEI 248
Query: 343 GDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCV 398
++ + +L+ PE ++ + D M +CW D + R S +C+
Sbjct: 249 YNY--------LIGGNRLKQP-PECMEE------VYDLMYQCWSADPKQRPSFTCL 289
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 36/197 (18%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 143 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 191
Query: 264 FGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASR 323
FGLA ++MAPE + F R ++ D+++ ++LWE+ S
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETI-----FDRVYTIQSDVWSFGVLLWEIFSL 246
Query: 324 CSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTMEE 383
+S P+ D ++E + T PE ++ TM +
Sbjct: 247 GAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------TMLD 286
Query: 384 CWDHDAEARLSASCVVE 400
CW + R + S +VE
Sbjct: 287 CWHGEPSQRPTFSELVE 303
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 134 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 182
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 183 FGLARDIXKDPDXVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 234
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 235 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 274
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 275 MLDCWHGEPSQRPTFSELVE 294
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 81/212 (38%), Gaps = 33/212 (15%)
Query: 115 QLVEVKAQGRFGA--VWKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYI 172
+LV+ G FG + + K NE VAVK +K ++EI + H NI+R+
Sbjct: 22 ELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF- 80
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
K T ++ Y G L +E++C ++++
Sbjct: 81 ---KEVILTPTHLAIVMEYASGGEL----------FERICNAGRFSEDEARFFFQQLISG 127
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLT--AAIADFGLALLFEPGKPCGDTHGQ----VGTR 286
+ + V HRD K N LL I FG + H Q VGT
Sbjct: 128 VSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYS-------KSSVLHSQPKSTVGTP 180
Query: 287 RYMAPEVLEGAINFSRDAFLRIDMYACALVLW 318
Y+APEVL + A D+++C + L+
Sbjct: 181 AYIAPEVLLKKEYDGKVA----DVWSCGVTLY 208
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 143 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 191
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 192 FGLARDIYKDPDYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 243
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 244 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 283
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 284 MLDCWHGEPSQRPTFSELVE 303
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 44/244 (18%)
Query: 105 PSPQQGCRSIQLVE-VKAQGRFG-AVWKAKFKNENVAVK--------IFLMQDKQSWQSE 154
P+ +Q +++ + E + G G V++ F+ VAVK I LM+ K +S+
Sbjct: 25 PNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD 84
Query: 155 QEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI 214
+H N++RY +E ++ L +L D ++ V+ E L
Sbjct: 85 ---------DHPNVIRYYCSETTDRFLYIALELCNL-----NLQDLVESKNVSDENL--- 127
Query: 215 ALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS-------------DLTAAI 261
L + L +I A + + HRD K N+L+ + +L I
Sbjct: 128 KLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 187
Query: 262 ADFGLALLFEPGKPC--GDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
+DFGL + G+ + + GT + APE+LE + R ID+++ V +
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEEST--KRRLTRSIDIFSMGCVFYY 245
Query: 320 LASR 323
+ S+
Sbjct: 246 ILSK 249
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 145 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 193
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 194 FGLARDIYKDPDYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 245
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 246 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 285
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 286 MLDCWHGEPSQRPTFSELVE 305
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 104/256 (40%), Gaps = 58/256 (22%)
Query: 112 RSIQLVEVKAQGRFGAVWKA-----KFKNENVAVKIFLMQDKQSWQSEQEIFK----LPH 162
+++ L + +G FG V KA K + V + ++++ S +++ L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 163 MEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCN------------------ 204
+ H ++++ GA S LI Y + GSL FL+ +
Sbjct: 83 VNHPHVIKLYGAC----SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 205 -------IVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDL 257
+T L A +S+G+ +L E L HRD + N+L+
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAEMKL-----------VHRDLAARNILVAEGR 187
Query: 258 TAAIADFGLAL-LFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALV 316
I+DFGL+ ++E + G++ ++MA E L I ++ D+++ ++
Sbjct: 188 KMKISDFGLSRDVYEEDSYVKRSQGRIPV-KWMAIESLFDHIYTTQS-----DVWSFGVL 241
Query: 317 LWELASRCSSVSPPPG 332
LWE+ + +P PG
Sbjct: 242 LWEIVTLGG--NPYPG 255
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 101/244 (41%), Gaps = 44/244 (18%)
Query: 105 PSPQQGCRSIQLVE-VKAQGRFG-AVWKAKFKNENVAVK--------IFLMQDKQSWQSE 154
P+ +Q +++ + E + G G V++ F+ VAVK I LM+ K +S+
Sbjct: 25 PNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD 84
Query: 155 QEIFKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI 214
+H N++RY +E ++ L +L D ++ V+ E L
Sbjct: 85 ---------DHPNVIRYYCSETTDRFLYIALELCNL-----NLQDLVESKNVSDENL--- 127
Query: 215 ALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKS-------------DLTAAI 261
L + L +I A + + HRD K N+L+ + +L I
Sbjct: 128 KLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI 187
Query: 262 ADFGLALLFEPGKPC--GDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWE 319
+DFGL + G+ + + GT + APE+LE + R ID+++ V +
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEEST--KRRLTRSIDIFSMGCVFYY 245
Query: 320 LASR 323
+ S+
Sbjct: 246 ILSK 249
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 180 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 228
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 229 FGLARDIYKDPDYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 280
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 281 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 320
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 321 MLDCWHGEPSQRPTFSELVE 340
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNE-NVAVKIFLMQDKQSWQSEQEIFK----LPHMEHD 166
+ + ++ G+FG V K++ + +VA+K+ K+ SE E + + ++ H+
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHE 79
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGLMH 224
+++ G + I ++IT Y G L ++L+ + +QL + + + + +
Sbjct: 80 KLVQLYGVCTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + N L+ ++DFGL+ + VG
Sbjct: 136 LESK-----------QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET----SSVG 180
Query: 285 TR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ R+ PEVL + FS + D++A +++WE+ S
Sbjct: 181 SKFPVRWSPPEVLMYS-KFSSKS----DIWAFGVLMWEIYS 216
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 188 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 236
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 237 FGLARDIYKDPDYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 288
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 289 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 328
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 329 MLDCWHGEPSQRPTFSELVE 348
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 195 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 243
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 244 FGLARDIYKDPDYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 295
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 296 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 335
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 336 MLDCWHGEPSQRPTFSELVE 355
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNE-NVAVKIFLMQDKQSWQSEQEIFK----LPHMEHD 166
+ + ++ G+FG V K++ + +VA+K+ K+ SE E + + ++ H+
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHE 64
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGLMH 224
+++ G + I ++IT Y G L ++L+ + +QL + + + + +
Sbjct: 65 KLVQLYGVCTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + N L+ ++DFGL+ + + G
Sbjct: 121 LESK-----------QFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSRGSKF 168
Query: 285 TRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
R+ PEVL + FS + D++A +++WE+ S
Sbjct: 169 PVRWSPPEVLMYS-KFSSKS----DIWAFGVLMWEIYS 201
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 193 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 241
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 242 FGLARDIYKDPDYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 293
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 294 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 333
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 334 MLDCWHGEPSQRPTFSELVE 353
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 240 AVAHRDFKSNNVLLKS-DLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K N+L+ S D T + DFG A P +P + + +R Y APE++ GA
Sbjct: 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAXICSRFYRAPELMLGAT 217
Query: 299 NFSRDAFLRIDMYACALVLWEL 320
++ ID+++ V EL
Sbjct: 218 EYTPS----IDLWSIGCVFGEL 235
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 42/200 (21%)
Query: 204 NIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIAD 263
+ +T E L + ++KG+ E L ++ HRD + N+LL I D
Sbjct: 186 DFLTLEHLICYSFQVAKGM-----EFLASRK------CIHRDLAARNILLSEKNVVKICD 234
Query: 264 FGLA--LLFEPGKP-CGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
FGLA + +P GD + ++MAPE + F R ++ D+++ ++LWE+
Sbjct: 235 FGLARDIYKDPDYVRKGDARLPL---KWMAPETI-----FDRVYTIQSDVWSFGVLLWEI 286
Query: 321 ASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDT 380
S +S P+ D ++E + T PE ++ T
Sbjct: 287 FSLGAS----------PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQ----------T 326
Query: 381 MEECWDHDAEARLSASCVVE 400
M +CW + R + S +VE
Sbjct: 327 MLDCWHGEPSQRPTFSELVE 346
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNE-NVAVKIFLMQDKQSWQSEQEIFK----LPHMEHD 166
+ + ++ G+FG V K++ + +VA+K+ K+ SE E + + ++ H+
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHE 79
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGLMH 224
+++ G + I ++IT Y G L ++L+ + +QL + + + + +
Sbjct: 80 KLVQLYGVCTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 135
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + N L+ ++DFGL+ + VG
Sbjct: 136 LESK-----------QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVG 180
Query: 285 TR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ R+ PEVL + FS + D++A +++WE+ S
Sbjct: 181 SKFPVRWSPPEVLMYS-KFSSKS----DIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 94/212 (44%), Gaps = 38/212 (17%)
Query: 121 AQGRFGAVWKAKFKNE-NVAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNILRYIGAE 175
G+FG V K++ + +VA+K+ K+ SE E + + ++ H+ +++ G
Sbjct: 13 GTGQFGVVKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
+ I ++IT Y G L ++L+ + +QL + + + + +L +
Sbjct: 69 TKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK----- 119
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR---RYMA 290
HRD + N L+ ++DFGL+ + VG++ R+
Sbjct: 120 ------QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKFPVRWSP 169
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
PEVL + FS + D++A +++WE+ S
Sbjct: 170 PEVLMYS-KFSSKS----DIWAFGVLMWEIYS 196
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 40/211 (18%)
Query: 100 HPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQ----------DKQ 149
H S + +L++V QG FG V+ + + ++ M+ D+
Sbjct: 16 HHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV 75
Query: 150 SWQSEQEIFKLPHMEHDNILR-YIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTW 208
+ E++I L + H +++ + + G+ +LI + G L L ++
Sbjct: 76 RTKMERDI--LADVNHPFVVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFT 128
Query: 209 EQLCRIALS-MSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLA 267
E+ + L+ ++ GL HLH + +RD K N+LL + + DFGL+
Sbjct: 129 EEDVKFYLAELALGLDHLHS-----------LGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Query: 268 LLFEPGKPCGDTHGQV----GTRRYMAPEVL 294
K D + GT YMAPEV+
Sbjct: 178 ------KEAIDHEKKAYSFCGTVEYMAPEVV 202
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 94/212 (44%), Gaps = 38/212 (17%)
Query: 121 AQGRFGAVWKAKFKNE-NVAVKIFLMQDKQSWQSEQEIFK----LPHMEHDNILRYIGAE 175
G+FG V K++ + +VA+K+ K+ SE E + + ++ H+ +++ G
Sbjct: 17 GTGQFGVVKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
+ I ++IT Y G L ++L+ + +QL + + + + +L +
Sbjct: 73 TKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK----- 123
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTR---RYMA 290
HRD + N L+ ++DFGL+ + VG++ R+
Sbjct: 124 ------QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVGSKFPVRWSP 173
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
PEVL + FS + D++A +++WE+ S
Sbjct: 174 PEVLMYS-KFSSKS----DIWAFGVLMWEIYS 200
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 36/175 (20%)
Query: 132 KFKNENVAVKIFLMQDKQSWQSEQEI-FKLPHMEHDNILRYIGAEKRGESIHTEFWLITA 190
K N AVKI DK +EI L + +H NI+ G+ + +++T
Sbjct: 44 KATNXEFAVKII---DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYV----YVVTE 96
Query: 191 YHERGSLCD-FLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSN 249
+ G L D L+ + + + +++K + +LH + V HRD K +
Sbjct: 97 LXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ-----------GVVHRDLKPS 145
Query: 250 NVLLKSDL----TAAIADFGLA--LLFEPG---KPCGDTHGQVGTRRYMAPEVLE 295
N+L + + I DFG A L E G PC T ++APEVLE
Sbjct: 146 NILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC-------YTANFVAPEVLE 193
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 25/158 (15%)
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSR 302
HRD + N+LL I DFGLA + ++MAPE + F+
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESI-----FNC 245
Query: 303 DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRP 362
D+++ + LWEL S S SP PG +P ++ ++ + R
Sbjct: 246 VYTFESDVWSYGIFLWELFSLGS--SPYPG---MPVDSKF----------YKMIKEGFRM 290
Query: 363 TLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
PE HA + D M+ CWD D R + +V+
Sbjct: 291 LSPE----HAPA-EMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNE-NVAVKIFLMQDKQSWQSEQEIFK----LPHMEHD 166
+ + ++ G+FG V K++ + +VA+K+ K+ SE E + + ++ H+
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHE 64
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGLMH 224
+++ G + I ++IT Y G L ++L+ + +QL + + + + +
Sbjct: 65 KLVQLYGVCTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + N L+ ++DFGL+ + VG
Sbjct: 121 LESK-----------QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVG 165
Query: 285 TR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ R+ PEVL + FS + D++A +++WE+ S
Sbjct: 166 SKFPVRWSPPEVLMYS-KFSSKS----DIWAFGVLMWEIYS 201
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 115 QLVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQSEQEIFKLPHM---EHDNIL 169
++++V +G FG V KA +++VA+K+ + + Q+ +EI L H+ + DN +
Sbjct: 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLC---DFLKCNI---VTWEQLCRIALSMSKGLM 223
I ++ + R +C + L N+ + + +L + +
Sbjct: 160 NVI-------------HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIA--DFGLALLFEPGKPCGDTHG 281
H IL +K + H D K N+LLK + I DFG + +E + +
Sbjct: 207 H---SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQR----VYT 258
Query: 282 QVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ +R Y APEV+ GA + IDM++ +L EL +
Sbjct: 259 XIQSRFYRAPEVILGA-----RYGMPIDMWSLGCILAELLT 294
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 115 QLVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQSEQEIFKLPHM---EHDNIL 169
++++V +G FG V KA +++VA+K+ + + Q+ +EI L H+ + DN +
Sbjct: 100 EVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLC---DFLKCNI---VTWEQLCRIALSMSKGLM 223
I ++ + R +C + L N+ + + +L + +
Sbjct: 160 NVI-------------HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIA--DFGLALLFEPGKPCGDTHG 281
H IL +K + H D K N+LLK + I DFG + +E + +
Sbjct: 207 H---SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQR----VYX 258
Query: 282 QVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ +R Y APEV+ GA + IDM++ +L EL +
Sbjct: 259 XIQSRFYRAPEVILGA-----RYGMPIDMWSLGCILAELLT 294
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 25/158 (15%)
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSR 302
HRD + N+LL I DFGLA + ++MAPE + F+
Sbjct: 191 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI-----FNC 245
Query: 303 DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRP 362
D+++ + LWEL S S SP PG +P ++ ++ + R
Sbjct: 246 VYTFESDVWSYGIFLWELFSLGS--SPYPG---MPVDSKF----------YKMIKEGFRM 290
Query: 363 TLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
PE HA + D M+ CWD D R + +V+
Sbjct: 291 LSPE----HAPA-EMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 112 RSIQLVEVKAQGRFGAVWKAKFKNE-NVAVKIFLMQDKQSWQSEQEIFK----LPHMEHD 166
+ + ++ G+FG V K++ + +VA+K+ K+ SE E + + ++ H+
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHE 70
Query: 167 NILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLK--CNIVTWEQLCRIALSMSKGLMH 224
+++ G + I ++IT Y G L ++L+ + +QL + + + + +
Sbjct: 71 KLVQLYGVCTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 126
Query: 225 LHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVG 284
L + HRD + N L+ ++DFGL+ + VG
Sbjct: 127 LESK-----------QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD----DEYTSSVG 171
Query: 285 TR---RYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
++ R+ PEVL + FS + D++A +++WE+ S
Sbjct: 172 SKFPVRWSPPEVLMYS-KFSSKS----DIWAFGVLMWEIYS 207
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 25/158 (15%)
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSR 302
HRD + N+LL I DFGLA + ++MAPE + F+
Sbjct: 186 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI-----FNC 240
Query: 303 DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRP 362
D+++ + LWEL S S SP PG +P ++ ++ + R
Sbjct: 241 VYTFESDVWSYGIFLWELFSLGS--SPYPG---MPVDSKF----------YKMIKEGFRM 285
Query: 363 TLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
PE HA + D M+ CWD D R + +V+
Sbjct: 286 LSPE----HAPA-EMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 25/158 (15%)
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSR 302
HRD + N+LL I DFGLA + ++MAPE + F+
Sbjct: 184 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI-----FNC 238
Query: 303 DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRP 362
D+++ + LWEL S S SP PG +P ++ ++ + R
Sbjct: 239 VYTFESDVWSYGIFLWELFSLGS--SPYPG---MPVDSKF----------YKMIKEGFRM 283
Query: 363 TLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
PE HA + D M+ CWD D R + +V+
Sbjct: 284 LSPE----HAPA-EMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 39/221 (17%)
Query: 115 QLVEVKAQGRFGAVWKA--KFKNENVAVKIFLMQDKQSWQSEQEIFKLPHM---EHDNIL 169
++++V +G FG V KA +++VA+K+ + + Q+ +EI L H+ + DN +
Sbjct: 100 EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 170 RYIGAEKRGESIHTEFWLITAYHERGSLC---DFLKCNI---VTWEQLCRIALSMSKGLM 223
I ++ + R +C + L N+ + + +L + +
Sbjct: 160 NVI-------------HMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 224 HLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIA--DFGLALLFEPGKPCGDTHG 281
H IL +K + H D K N+LLK + I DFG + +E + +
Sbjct: 207 H---SILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQR----VYT 258
Query: 282 QVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
+ +R Y APEV+ GA + IDM++ +L EL +
Sbjct: 259 XIQSRFYRAPEVILGA-----RYGMPIDMWSLGCILAELLT 294
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 36/175 (20%)
Query: 132 KFKNENVAVKIFLMQDKQSWQSEQEI-FKLPHMEHDNILRYIGAEKRGESIHTEFWLITA 190
K N AVKI DK +EI L + +H NI+ G+ + +++T
Sbjct: 44 KATNMEFAVKII---DKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYV----YVVTE 96
Query: 191 YHERGSLCD-FLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSN 249
+ G L D L+ + + + +++K + +LH + V HRD K +
Sbjct: 97 LMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ-----------GVVHRDLKPS 145
Query: 250 NVLLKSDL----TAAIADFGLA--LLFEPG---KPCGDTHGQVGTRRYMAPEVLE 295
N+L + + I DFG A L E G PC T ++APEVLE
Sbjct: 146 NILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC-------YTANFVAPEVLE 193
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 42/199 (21%)
Query: 206 VTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFG 265
+T E L + +++G+ E L ++ HRD + N+LL + I DFG
Sbjct: 196 ITMEDLISYSFQVARGM-----EFLSSRK------CIHRDLAARNILLSENNVVKICDFG 244
Query: 266 LALLFEPGKPC---GDTHGQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
LA GDT + ++MAPE + F + + D+++ ++LWE+ S
Sbjct: 245 LARDIYKNPDYVRKGDTRLPL---KWMAPESI-----FDKIYSTKSDVWSYGVLLWEIFS 296
Query: 323 RCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRPTLPETWKQHAGMLALCDTME 382
S P+ D ++E + + + PE ++ M
Sbjct: 297 LGGS----------PYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQ----------IML 336
Query: 383 ECWDHDAEARLSASCVVER 401
+CW D + R + +VE+
Sbjct: 337 DCWHRDPKERPRFAELVEK 355
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 25/158 (15%)
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINFSR 302
HRD + N+LL I DFGLA + ++MAPE + F+
Sbjct: 168 HRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESI-----FNC 222
Query: 303 DAFLRIDMYACALVLWELASRCSSVSPPPGEYRLPFSAEVGDHPSLEDMQEAVVHKKLRP 362
D+++ + LWEL S S SP PG +P ++ ++ + R
Sbjct: 223 VYTFESDVWSYGIFLWELFSLGS--SPYPG---MPVDSKF----------YKMIKEGFRM 267
Query: 363 TLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVE 400
PE HA + D M+ CWD D R + +V+
Sbjct: 268 LSPE----HAPA-EMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCG-----DTHGQVGTRRY 288
+ +AHRD K N+L + + I DFGL + C + G+ Y
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 289 MAPEVLEGAINFSRDAFL---RIDMYACALVLWELAS 322
MAPEV+E FS +A + R D+++ ++L+ L S
Sbjct: 188 MAPEVVEA---FSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 50/265 (18%)
Query: 106 SPQQGCRSIQLVEVKAQGRFGAVWKAKFKNEN--VAVKIF----LMQDK--QSWQSEQEI 157
S + G + + + V +G FG V A+ K AVK+ ++QD + +E+ I
Sbjct: 17 SNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRI 76
Query: 158 FKLPHMEHDNILRYIGAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRI-AL 216
L H + + + + + + + + G L ++ + E R A
Sbjct: 77 LSLAR-NHPFLTQLFCCFQTPDRL----FFVMEFVNGGDLMFHIQKSRRFDEARARFYAA 131
Query: 217 SMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPC 276
+ LM LH++ + +RD K +NVLL + +ADFG+ + G
Sbjct: 132 EIISALMFLHDK-----------GIIYRDLKLDNVLLDHEGHCKLADFGMC---KEGICN 177
Query: 277 GDTHGQV-GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGEYR 335
G T GT Y+APE+L+ + +D +A ++L+E+ C
Sbjct: 178 GVTTATFCGTPDYIAPEILQEMLYGP-----AVDWWAMGVLLYEML--CGHA-------- 222
Query: 336 LPFSAEVGDHPSLEDMQEAVVHKKL 360
PF AE D D+ EA+++ ++
Sbjct: 223 -PFEAENED-----DLFEAILNDEV 241
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ HRD K N+L+ S T +ADFGLA ++ V T Y APEVL +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPV---VVTLWYRAPEVLLQSTYA 189
Query: 301 SRDAFLRIDMYACALVLWELASR 323
+ +DM++ + E+ R
Sbjct: 190 T-----PVDMWSVGCIFAEMFRR 207
>pdb|2H62|D Chain D, Crystal Structure Of A Ternary Ligand-Receptor Complex
Of Bmp-2
Length = 98
Score = 37.7 bits (86), Expect = 0.013, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 3 CYDKPKCVEKRPESKKNLNFCCCEGDMCNKDF 34
CYD+ +CV E + FCCCEG+ CN+ F
Sbjct: 66 CYDRQECVAT--EENPQVYFCCCEGNFCNERF 95
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
GL +LH + + H+D K N+LL + T I+ G+A P
Sbjct: 121 GLEYLHSQ-----------GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 281 GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
G+ + PE+ G FS ++D+++ + L+ + +
Sbjct: 170 TSQGSPAFQPPEIANGLDTFSG---FKVDIWSAGVTLYNITT 208
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 123 GRFGAV----WKAKFKNENVAVKIFLMQDKQSWQSEQ---EIFKLPHMEHDNILRYIGAE 175
G FG+V ++ + K +VA+K+ L Q + +E+ E + +++ I+R IG
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKV-LKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV- 404
Query: 176 KRGESIHTEFWLITAYHERGSLCDFL--KCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
+ E++ L+ G L FL K + + + +S G+ +L E+
Sbjct: 405 CQAEAL----MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK----- 455
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKPCGDTHGQVGTRRYMAP 291
HR+ + NVLL + A I+DFGL AL + + G+ + Y AP
Sbjct: 456 ------NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY-AP 508
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELAS 322
E INF R R D+++ + +WE S
Sbjct: 509 E----CINF-RKFSSRSDVWSYGVTMWEALS 534
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 34/221 (15%)
Query: 118 EVKAQGRFGAVWKA-KFKN-ENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
E+ +G + V A +N + AVKI +KQ+ S +F+ E + + + G +
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKII---EKQAGHSRSRVFR----EVETLYQCQGNK 71
Query: 176 KRGESIH-----TEFWLITAYHERGS-LCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEI 229
E I T F+L+ + GS L K + R+ ++ L LH +
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK- 130
Query: 230 LPNKADSYKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCG-----DTHG 281
+AHRD K N+L +S + I DF L + C +
Sbjct: 131 ----------GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT 180
Query: 282 QVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
G+ YMAPEV+E + + R D+++ +VL+ + S
Sbjct: 181 PCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLS 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ HRD K N+L+ S T +ADFGLA ++ V T Y APEVL +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPV---VVTLWYRAPEVLLQSTYA 189
Query: 301 SRDAFLRIDMYACALVLWELASR 323
+ +DM++ + E+ R
Sbjct: 190 T-----PVDMWSVGCIFAEMFRR 207
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ HRD K N+L+ S T +ADFGLA ++ V T Y APEVL +
Sbjct: 141 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPV---VVTLWYRAPEVLLQSTYA 197
Query: 301 SRDAFLRIDMYACALVLWELASR 323
+ +DM++ + E+ R
Sbjct: 198 T-----PVDMWSVGCIFAEMFRR 215
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 123 GRFGAV----WKAKFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEH--DN--ILRYIGA 174
G FG+V ++ + K +VA+K+ L Q + +E E+ + + H DN I+R IG
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKV-LKQGTEKADTE-EMMREAQIMHQLDNPYIVRLIGV 78
Query: 175 EKRGESIHTEFWLITAYHERGSLCDFL--KCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
+ E++ L+ G L FL K + + + +S G+ +L E+
Sbjct: 79 -CQAEALM----LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---- 129
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGL--ALLFEPGKPCGDTHGQVGTRRYMA 290
HRD + NVLL + A I+DFGL AL + + G+ + Y A
Sbjct: 130 -------NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY-A 181
Query: 291 PEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
PE INF R R D+++ + +WE S
Sbjct: 182 PE----CINF-RKFSSRSDVWSYGVTMWEALS 208
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 37/222 (16%)
Query: 121 AQGRFGAVWKA--KFKNENVAVKIFLM---QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V + + N A K + DK++ + +EI + + H ++ A
Sbjct: 166 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR--KEIQTMSVLRHPTLVNLHDAF 223
Query: 176 KRGESIHTEFWLITAYHERGSLCDFL--KCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
+ E +I + G L + + + N ++ ++ + KGL H+HE
Sbjct: 224 ED----DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE------ 273
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTA--AIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
++Y H D K N++ + + + DFGL +P + T GT + AP
Sbjct: 274 -NNY----VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TGTAEFAAP 325
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
EV EG + DM++ ++ + L S +SP GE
Sbjct: 326 EVAEG-----KPVGYYTDMWSVGVLSYIL---LSGLSPFGGE 359
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ +ADFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ +ADFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|4FAO|E Chain E, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|F Chain F, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|K Chain K, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|L Chain L, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|Q Chain Q, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|R Chain R, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|W Chain W, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|X Chain X, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|EE Chain e, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|FF Chain f, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|KK Chain k, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
pdb|4FAO|LL Chain l, Specificity And Structure Of A High Affinity Activin-Like
1 (Alk1) Signaling Complex
Length = 124
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 1 MECYDKPKCVEKRPESKKNLNFCCCEGDMCNKDFAWEPAPLPPPINSTTP 50
CYD+ +CV E + FCCCEG+ CN+ F P P + P
Sbjct: 66 FNCYDRQECVAT--EENPQVYFCCCEGNFCNERFTHLPEAGGPEVTYEPP 113
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 37/222 (16%)
Query: 121 AQGRFGAVWKA--KFKNENVAVKIFLM---QDKQSWQSEQEIFKLPHMEHDNILRYIGAE 175
G FG V + + N A K + DK++ + +EI + + H ++ A
Sbjct: 60 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR--KEIQTMSVLRHPTLVNLHDAF 117
Query: 176 KRGESIHTEFWLITAYHERGSLCDFL--KCNIVTWEQLCRIALSMSKGLMHLHEEILPNK 233
+ E +I + G L + + + N ++ ++ + KGL H+HE
Sbjct: 118 EDD----NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE------ 167
Query: 234 ADSYKPAVAHRDFKSNNVLLKSDLTAAIA--DFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
++Y H D K N++ + + + DFGL +P + T GT + AP
Sbjct: 168 -NNY----VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT---TGTAEFAAP 219
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVSPPPGE 333
EV EG + DM++ ++ + L S +SP GE
Sbjct: 220 EVAEG-----KPVGYYTDMWSVGVLSYIL---LSGLSPFGGE 253
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ +ADFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ +ADFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ HRD K N+L+ S T +ADFGLA ++ V T Y APEVL +
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPV---VVTLWYRAPEVLLQSTYA 189
Query: 301 SRDAFLRIDMYACALVLWELASR 323
+ +DM++ + E+ R
Sbjct: 190 T-----PVDMWSVGCIFAEMFRR 207
>pdb|1S4Y|A Chain A, Crystal Structure Of The ActivinACTRIIB EXTRACELLULAR
DOMAIN
pdb|1S4Y|C Chain C, Crystal Structure Of The ActivinACTRIIB EXTRACELLULAR
DOMAIN
Length = 98
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 1 MECYDKPKCVEKRPESKKNLNFCCCEGDMCNKDFAWEPAP 40
CYD+ +CV E + FCCCEG+ CN+ F P P
Sbjct: 60 FNCYDRQECV--ATEENPQVYFCCCEGNFCNERFTHLPEP 97
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 87/234 (37%), Gaps = 67/234 (28%)
Query: 100 HPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAK--FKNENVAVKIF-------------- 143
HP P + R I LV G F VW AK N +VA+KI
Sbjct: 8 HPAFKGEPYKDARYI-LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEI 66
Query: 144 -LMQ-------DKQSWQSEQEIFKL-PHMEH---DNILRYIGAEKRGESIHTEFWLITAY 191
L+Q K+ I KL H H + + + E GE++ LI Y
Sbjct: 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENL---LALIKKY 123
Query: 192 HERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNV 251
RG ++K +I+ + GL ++H + + H D K NV
Sbjct: 124 EHRGIPLIYVK----------QISKQLLLGLDYMHR----------RCGIIHTDIKPENV 163
Query: 252 LLK------SDLTAAIADFGLALLFEPGKPCGDTH--GQVGTRRYMAPEVLEGA 297
L++ + + IAD G A + D H + TR Y +PEVL GA
Sbjct: 164 LMEIVDSPENLIQIKIADLGNACWY-------DEHYTNSIQTREYRSPEVLLGA 210
>pdb|3HAM|A Chain A, Structure Of The Gentamicin-Aph(2")-Iia Complex
pdb|3HAM|B Chain B, Structure Of The Gentamicin-Aph(2")-Iia Complex
pdb|3HAV|A Chain A, Structure Of The Streptomycin-Atp-Aph(2")-Iia Ternary
Complex
pdb|3HAV|B Chain B, Structure Of The Streptomycin-Atp-Aph(2")-Iia Ternary
Complex
pdb|3HAV|C Chain C, Structure Of The Streptomycin-Atp-Aph(2")-Iia Ternary
Complex
Length = 299
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 201 LKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKA-DSYKPAVAHRDFKSNNVLLKSDLTA 259
L +I+ EQL + M + + ++E IL N Y P + H DF +NN++ +++
Sbjct: 149 LLISILEKEQL--LTDEMLEHIETIYENILNNAVLFKYTPCLVHNDFSANNMIFRNNRLF 206
Query: 260 AIADFGLALLFEPGKPCGD 278
+ DFG F G P D
Sbjct: 207 GVIDFG---DFNVGDPDND 222
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 87/234 (37%), Gaps = 67/234 (28%)
Query: 100 HPTSPPSPQQGCRSIQLVEVKAQGRFGAVWKAK--FKNENVAVKIF-------------- 143
HP P + R I LV G F VW AK N +VA+KI
Sbjct: 8 HPAFKGEPYKDARYI-LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEI 66
Query: 144 -LMQ-------DKQSWQSEQEIFKL-PHMEH---DNILRYIGAEKRGESIHTEFWLITAY 191
L+Q K+ I KL H H + + + E GE++ LI Y
Sbjct: 67 KLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENL---LALIKKY 123
Query: 192 HERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNV 251
RG ++K +I+ + GL ++H + + H D K NV
Sbjct: 124 EHRGIPLIYVK----------QISKQLLLGLDYMHR----------RCGIIHTDIKPENV 163
Query: 252 LLK------SDLTAAIADFGLALLFEPGKPCGDTH--GQVGTRRYMAPEVLEGA 297
L++ + + IAD G A + D H + TR Y +PEVL GA
Sbjct: 164 LMEIVDSPENLIQIKIADLGNACWY-------DEHYTNSIQTREYRSPEVLLGA 210
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 92/216 (42%), Gaps = 33/216 (15%)
Query: 115 QLVEVKAQGRFGAVWKAK--FKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRYI 172
QLV +G++ V++A NE V VKI K + E +I +N+
Sbjct: 40 QLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKIL-------ENL---- 88
Query: 173 GAEKRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPN 232
+ G +I T ++ R F N ++QL + L+ +++E IL
Sbjct: 89 ---RGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ-TLTDYDIRFYMYE-ILKA 143
Query: 233 KADSYKPAVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAP 291
+ + HRD K +NV++ + + D+GLA + PG+ + + +V +R + P
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGP 200
Query: 292 EVLEGAINFSRDAFLRIDMYACALVLWELASRCSSV 327
E+L + MY +L +W L +S+
Sbjct: 201 ELL-----------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 20/118 (16%)
Query: 183 TEFWLITAYHERG---SLCDFLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKP 239
+E LI Y G SLC +V+ + R+ + +G+ +LH+
Sbjct: 102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN----------- 150
Query: 240 AVAHRDFKSNNVLLKSDL---TAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ H D K N+LL S I DFG++ + G C + +GT Y+APE+L
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHAC-ELREIMGTPEYLAPEIL 205
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 240 AVAHRDFKSNNVLLKSDLTAA-IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ HRD K +NV++ +L + D+GLA + PGK + + +V +R + PE+L
Sbjct: 146 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELL 198
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 240 AVAHRDFKSNNVLLKSDLTAA-IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ HRD K +NV++ +L + D+GLA + PGK + + +V +R + PE+L
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELL 197
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 240 AVAHRDFKSNNVLLKSDLTAA-IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ HRD K +NV++ +L + D+GLA + PGK + + +V +R + PE+L
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELL 197
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 240 AVAHRDFKSNNVLLKSDLTAA-IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ HRD K +NV++ +L + D+GLA + PGK + + +V +R + PE+L
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELL 197
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 240 AVAHRDFKSNNVLLKSDLTAA-IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ HRD K +NV++ +L + D+GLA + PGK + + +V +R + PE+L
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELL 197
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 240 AVAHRDFKSNNVLLKSDLTAA-IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ HRD K +NV++ +L + D+GLA + PGK + + +V +R + PE+L
Sbjct: 147 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELL 199
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 240 AVAHRDFKSNNVLLKSDLTAA-IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ HRD K +NV++ +L + D+GLA + PGK + + +V +R + PE+L
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELL 197
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 240 AVAHRDFKSNNVLLKSDLTAA-IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ HRD K +NV++ +L + D+GLA + PGK + + +V +R + PE+L
Sbjct: 146 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELL 198
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 240 AVAHRDFKSNNVLLKSDLTAA-IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ HRD K +NV++ +L + D+GLA + PGK + + +V +R + PE+L
Sbjct: 145 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELL 197
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
++ + H D K N L+ + I DFG+A +P QVGT YM PE ++
Sbjct: 144 HQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 240 AVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
+ H D K N L+ + I DFG+A +P QVGT YM PE ++
Sbjct: 131 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 185
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
++ + H D K N L+ + I DFG+A +P QVGT YM PE ++
Sbjct: 172 HQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 240 AVAHRDFKSNNVLLKSDLTAA-IADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ HRD K +NV++ +L + D+GLA + PGK + + +V +R + PE+L
Sbjct: 166 GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK---EYNVRVASRYFKGPELL 218
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
++ + H D K N L+ + I DFG+A +P QVGT YM PE ++
Sbjct: 124 HQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 181
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
++ + H D K N L+ + I DFG+A +P QVGT YM PE ++
Sbjct: 125 HQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NVL+ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 151 GIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 203
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 204 -------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLAGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 210 QLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALL 269
Q A +S GL LH K + +RD K +NV+L S+ IADFG+
Sbjct: 121 QAVFYAAEISIGLFFLH-----------KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK- 168
Query: 270 FEPGKPCGDTHGQVGTRRYMAPEVL 294
E T GT Y+APE++
Sbjct: 169 -EHMMDGVTTREFCGTPDYIAPEII 192
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+++ + DFGLA + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
++ + H D K N L+ + I DFG+A +P QVGT YM PE ++
Sbjct: 172 HQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLXGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+++ + DFGLA + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 21/178 (11%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEG--AI 298
+ HRD K +N+LL I DF +A + P + T GT+ YMAPE+
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITT--MAGTKPYMAPEMFSSRKGA 192
Query: 299 NFSRDAFLRIDMYACALVLWELAS-------RCSSVSPPPGEYRLPFSAEVGDHPSLEDM 351
+S +D ++ + +EL R S+ S E F V +PS
Sbjct: 193 GYS----FAVDWWSLGVTAYELLRGRRPYHIRSSTSSK---EIVHTFETTVVTYPSAWSQ 245
Query: 352 QEAVVHKK-LRPTLPETWKQHAGMLALCDTMEECWDHDAEARLSASCVVERGMLALCD 408
+ + KK L P + + Q + + + WD + RL + +G L CD
Sbjct: 246 EMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIPNKGRLN-CD 302
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
++ + H D K N L+ + I DFG+A +P QVGT YM PE ++
Sbjct: 144 HQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIK 201
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 96/271 (35%), Gaps = 51/271 (18%)
Query: 121 AQGRFGAVWKA--KFKNENVAVKIF--LMQDKQSWQS-EQEIFKLPHMEHDNILRYIGAE 175
+G +G V+ A K N+NVA+K + +D + +EI L ++ D I+R
Sbjct: 37 GRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLI 96
Query: 176 KRGESIHTEFWLITAYHERGSLCDFLKCNIVTWEQLCRIAL-SMSKGLMHLHEEILPNKA 234
+ + + I L K I EQ + L ++ G +HE
Sbjct: 97 IPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHES------ 150
Query: 235 DSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH-------------- 280
+ HRD K N LL D + I DFGLA K D H
Sbjct: 151 -----GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDK---DIHIVNDLEEKEENEEP 202
Query: 281 ------------GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELASRCSSVS 328
V TR Y APE++ N++ ID+++ + EL + S
Sbjct: 203 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNS----IDIWSTGCIFAELLNMMKSHI 258
Query: 329 PPPGEYRLPFSAEVGDHPSLEDMQEAVVHKK 359
P R P P D VH+K
Sbjct: 259 NNPTN-RFPLFPGSSCFPLSPDHNSKKVHEK 288
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 202
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 203 -------VDYQMYDYSLDMWSLGCMLASM 224
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 203
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 204 -------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 203
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 204 -------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 203
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 204 -------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 203
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 204 -------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 150 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 202
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 203 -------VDYQMYDYSLDMWSLGCMLASM 224
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 203
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 204 -------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 203
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 204 -------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 203
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 204 -------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 203
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 204 -------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWTLCGTPEYLAPEII-----L 197
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAA 219
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 151 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 203
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 204 -------VDYQMYDYSLDMWSLGCMLASM 225
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 201
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 202 -------VDYQMYDYSLDMWSLGCMLASM 223
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 15/89 (16%)
Query: 240 AVAHRDFKSNNVLLKSD-LTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAI 298
+ HRD K +NV++ + + D+GLA + PG+ + + +V +R + PE+L
Sbjct: 156 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELL---- 208
Query: 299 NFSRDAFLRIDMYACALVLWELASRCSSV 327
+ MY +L +W L +S+
Sbjct: 209 -------VDYQMYDYSLDMWSLGCMLASM 230
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 206
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAA 228
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWTLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 14/97 (14%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAA---IADFGLALLFEPGKPCG-----DTHGQVGTRRY 288
+ +AHRD K N+L + + I DF L + C + G+ Y
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 289 MAPEVLEGAINFSRDAFL---RIDMYACALVLWELAS 322
MAPEV+E FS +A + R D+++ ++L+ L S
Sbjct: 188 MAPEVVEA---FSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 232
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAA 254
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 204
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAA 226
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 204
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAA 226
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 198
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAA 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 232
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAA 254
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGATWTLCGTPEYLAPEII-----L 232
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAA 254
>pdb|3UZR|A Chain A, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(2'')-Ib, Apo Form
pdb|4DCA|A Chain A, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(2'')-Ib, Adp-Bound
Length = 320
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 225 LHEEILPNKA-DSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGD 278
++E IL N Y P + H DF +NN + +++ + DFG F G P D
Sbjct: 192 IYENILSNAVLFKYTPCLVHNDFSANNXIFRNNRLFGVIDFG---DFNVGDPDND 243
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 132 KFKNENVAVKIFLMQDKQSWQSEQEI-FKLPHMEHDNILRYIGAEKRGESIHTEFWLITA 190
K N AVK+ DK +EI L + +H NI+ G+ + +L+T
Sbjct: 49 KATNMEYAVKVI---DKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHV----YLVTE 101
Query: 191 YHERGSLCD-FLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSN 249
G L D L+ + + + ++ K + +LH + V HRD K +
Sbjct: 102 LMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ-----------GVVHRDLKPS 150
Query: 250 NVLLKSDLT----AAIADFGLA--LLFEPG---KPCGDTHGQVGTRRYMAPEVLE 295
N+L + I DFG A L E G PC T ++APEVL+
Sbjct: 151 NILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC-------YTANFVAPEVLK 198
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 132 KFKNENVAVKIFLMQDKQSWQSEQEI-FKLPHMEHDNILRYIGAEKRGESIHTEFWLITA 190
K N AVK+ DK +EI L + +H NI+ G+ + +L+T
Sbjct: 49 KATNMEYAVKVI---DKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHV----YLVTE 101
Query: 191 YHERGSLCD-FLKCNIVTWEQLCRIALSMSKGLMHLHEEILPNKADSYKPAVAHRDFKSN 249
G L D L+ + + + ++ K + +LH + V HRD K +
Sbjct: 102 LMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ-----------GVVHRDLKPS 150
Query: 250 NVLLKSDLT----AAIADFGLA--LLFEPG---KPCGDTHGQVGTRRYMAPEVLE 295
N+L + I DFG A L E G PC T ++APEVL+
Sbjct: 151 NILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC-------YTANFVAPEVLK 198
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+++ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 240 AVAHRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRYMAPEVLE 295
+ HRD K +N+LL +ADFG + + E G DT VGT Y++PEVL+
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT--AVGTPDYISPEVLK 248
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+++ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+++ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+++ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+++ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+++ + DFG A + G T GT Y+APE++
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 212
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAA 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+++ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2H64|C Chain C, Crystal Structure Of A Ternary Ligand-Receptor Complex
Of Bmp-2
Length = 99
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 1 MECYDKPKCVEKRPESKKNLNFCCCEGDMCNKDFA 35
CYD+ +CV E + FCCCEG+ CN+ F
Sbjct: 64 FNCYDRQECVA--TEENPQVYFCCCEGNFCNERFT 96
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+++ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----I 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 227 EEILPNKADSYKPAVAHRDFKSNNVLLKS---DLTAAIADFGLALLFEPGKPCGDTHGQV 283
++IL A ++ + HRD K N+L + D IADFGL+ + E G
Sbjct: 155 KQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP 214
Query: 284 GTRRYMAPEVLEG 296
G Y APE+L G
Sbjct: 215 G---YCAPEILRG 224
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++++A+
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAA 233
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLE 295
++ + H D K N L+ + I DFG+A +P QVG YM PE ++
Sbjct: 172 HQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 32/195 (16%)
Query: 113 SIQLVEVKAQGRFGAVWKAKFKNENVAVKIFLMQDKQSW----QSEQEIFKLPHMEHDNI 168
++++V +G F V K K +++ M+ W + E F+ E ++
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTG---QVYAMKIMNKWDMLKRGEVSCFR----EERDV 114
Query: 169 LRYIGAEKR-GESIHTEF------WLITAYHERGSLCDFL-KCNIVTWEQLCRIALSMSK 220
L + ++R +H F +L+ Y+ G L L K ++ R L+
Sbjct: 115 L--VNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA--- 169
Query: 221 GLMHLHEEILPNKADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTH 280
EI+ ++ HRD K +N+LL +ADFG L +
Sbjct: 170 -------EIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV-RSL 221
Query: 281 GQVGTRRYMAPEVLE 295
VGT Y++PE+L+
Sbjct: 222 VAVGTPDYLSPEILQ 236
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT Y+AP AI
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEYLAP-----AIIL 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRYMAPEVLE 295
HRD K +N+LL +ADFG + + + G DT VGT Y++PEVL+
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT--AVGTPDYISPEVLK 247
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRYMAPEVLE 295
HRD K +N+LL +ADFG + + + G DT VGT Y++PEVL+
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT--AVGTPDYISPEVLK 242
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 243 HRDFKSNNVLLKSDLTAAIADFGLAL-LFEPGKPCGDTHGQVGTRRYMAPEVLE 295
HRD K +N+LL +ADFG + + + G DT VGT Y++PEVL+
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT--AVGTPDYISPEVLK 247
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 26/146 (17%)
Query: 182 HTEFWLITAYHERGSLCDFLKCNIVTWEQL-CRIALSMSKGLM--------HLHEEILPN 232
+ E ++I Y E S+ F + V + C I + + K ++ ++H E
Sbjct: 115 YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE---- 170
Query: 233 KADSYKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPE 292
+ HRD K +N+L+ + ++DFG + K G GT +M PE
Sbjct: 171 ------KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPE 220
Query: 293 VLEGAINFSRDAFLRIDMYACALVLW 318
+++ ++D+++ + L+
Sbjct: 221 FFSNESSYNG---AKVDIWSLGICLY 243
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 240 AVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAIN 299
+ +RD K +NV+L S+ IADFG+ E T GT Y+APE++
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIA---- 515
Query: 300 FSRDAFLRIDMYACALVLWEL 320
+ +D +A ++L+E+
Sbjct: 516 -YQPYGKSVDWWAFGVLLYEM 535
>pdb|3B4N|A Chain A, Crystal Structure Analysis Of Pectate Lyase Peli From
Erwinia Chrysanthemi
pdb|3B4N|B Chain B, Crystal Structure Analysis Of Pectate Lyase Peli From
Erwinia Chrysanthemi
pdb|3B8Y|A Chain A, Crystal Structure Of Pectate Lyase Peli From Erwinia
Chrysanthemi In Complex With Tetragalacturonic Acid
pdb|3B8Y|B Chain B, Crystal Structure Of Pectate Lyase Peli From Erwinia
Chrysanthemi In Complex With Tetragalacturonic Acid
Length = 344
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 20/123 (16%)
Query: 195 GSLCDFLKCNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY--KP-AVAHRDFKSN 249
G CD C I V WE +C A + + M + I N D Y KP V + K++
Sbjct: 174 GIHCDSGNCTIENVIWEDICEDAATNNGKTMTIVGGIAHNAKDGYGGKPDKVLQHNSKNS 233
Query: 250 NVLLKSDLTAAIADFGLALLFEPGK---PCGDTHGQVGTRRYMAPEVLEGAINFSRDAFL 306
++K + T L E GK CGD G R V +N + D+
Sbjct: 234 TTVVKGNFT---------LTGEHGKLWRSCGDCSNNGGPRFLT---VTSATVNGTIDSIA 281
Query: 307 RID 309
++
Sbjct: 282 GVN 284
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 29/109 (26%)
Query: 237 YKPAVAHRDFKSNNVLLKSDLTAAIADFGLALLFE---------PGKPCGDTH------- 280
+ + HRD K N L+ D + + DFGLA + P P D
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 281 ---------GQVGTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWEL 320
G V TR Y APE++ N++ ID+++ + EL
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTE----AIDVWSIGCIFAEL 277
>pdb|3B90|A Chain A, Crystal Structure Of The Catalytic Domain Of Pectate Lyase
Peli From Erwinia Chrysanthemi
pdb|3B90|B Chain B, Crystal Structure Of The Catalytic Domain Of Pectate Lyase
Peli From Erwinia Chrysanthemi
Length = 226
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 20/120 (16%)
Query: 198 CDFLKCNI--VTWEQLCRIALSMSKGLMHLHEEILPNKADSY--KP-AVAHRDFKSNNVL 252
CD C I V WE +C A + + M + I N D Y KP V + K++ +
Sbjct: 59 CDSGNCTIENVIWEDICEDAATNNGKTMTIVGGIAHNAKDGYGGKPDKVLQHNSKNSTTV 118
Query: 253 LKSDLTAAIADFGLALLFEPGK---PCGDTHGQVGTRRYMAPEVLEGAINFSRDAFLRID 309
+K + T L E GK CGD G R V +N + D+ ++
Sbjct: 119 VKGNFT---------LTGEHGKLWRSCGDCSNNGGPRFLT---VTSATVNGTIDSIAGVN 166
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 240 AVAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVL 294
+ +RD K +NV+L S+ IADFG+ E T GT Y+APE++
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPEII 193
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 241 VAHRDFKSNNVLLKSDLTAAIADFGLALLFEPGKPCGDTHGQVGTRRYMAPEVLEGAINF 300
+ +RD K N+L+ + DFG A + G T GT +APE++
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFA-----KRVKGRTWXLCGTPEALAPEII-----L 211
Query: 301 SRDAFLRIDMYACALVLWELAS 322
S+ +D +A ++++E+A+
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAA 233
>pdb|2HLQ|A Chain A, Crystal Structure Of The Extracellular Domain Of The
Type Ii Bmp Receptor
pdb|2HLR|A Chain A, Crystal Structure Of The Extracellular Domain Of The
Type Ii Bmp Receptor
Length = 100
Score = 30.8 bits (68), Expect = 1.6, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 2 ECYDKPKCVEKRPESKKN--LNFCCCEGDMCNKDF 34
EC+ + V P S +N FCCC D+CN +F
Sbjct: 62 ECHYEECVVTTTPPSIQNGTYRFCCCSTDLCNVNF 96
>pdb|3N4V|A Chain A, Apo Aph(2")-Iva Form Iii
pdb|3N4V|B Chain B, Apo Aph(2")-Iva Form Iii
Length = 301
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 220 KGLMHLHEEILPNKAD-SYKPAVAHRDFKSNNVLLKSDLTA--AIADFGLALLFEP 272
K + + +IL N+ Y P + H DF S+++L ++ I DFG A + +P
Sbjct: 171 KAVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 226
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 29/117 (24%)
Query: 228 EILPNKADSY--KPAVAHRDFKSNNVLL------KSDLTAAIADFGLALLFEPGKPCG-- 277
EIL KA +Y K ++ H D K N+LL KS +T G + K G
Sbjct: 145 EIL--KALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIK 202
Query: 278 -----------DTHGQV-GTRRYMAPEVLEGAINFSRDAFLRIDMYACALVLWELAS 322
D HG + TR+Y APEV+ +N D + DM++ VL EL +
Sbjct: 203 LIDFGCATFKSDYHGSIINTRQYRAPEVI---LNLGWD--VSSDMWSFGCVLAELYT 254
>pdb|3SGC|A Chain A, Crystal Structure Of Apo
Aminoglycoside-2''-Phosphotransferase Type Iva
Length = 302
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 220 KGLMHLHEEILPNKAD-SYKPAVAHRDFKSNNVLLKSDLTA--AIADFGLALLFEP 272
K + + +IL N+ Y P + H DF S+++L ++ I DFG A + +P
Sbjct: 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 226
>pdb|3SG9|A Chain A, Crystal Structure Of Aminoglycoside-2''-Phosphotransferase
Type Iva Kanamycin A Complex
pdb|3SG9|B Chain B, Crystal Structure Of Aminoglycoside-2''-Phosphotransferase
Type Iva Kanamycin A Complex
Length = 303
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 220 KGLMHLHEEILPNKAD-SYKPAVAHRDFKSNNVLLKSDLTA--AIADFGLALLFEP 272
K + + +IL N+ Y P + H DF S+++L ++ I DFG A + +P
Sbjct: 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 226
>pdb|3SG8|A Chain A, Crystal Structure Of Aminoglycoside-2''-Phosphotransferase
Type Iva Tobramycin Complex
pdb|3SG8|B Chain B, Crystal Structure Of Aminoglycoside-2''-Phosphotransferase
Type Iva Tobramycin Complex
Length = 304
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 220 KGLMHLHEEILPNKAD-SYKPAVAHRDFKSNNVLLKSDLTA--AIADFGLALLFEP 272
K + + +IL N+ Y P + H DF S+++L ++ I DFG A + +P
Sbjct: 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 226
>pdb|4DTB|A Chain A, Crystal Structure Of F95y
Aminoglycoside-2''-Phosphotransferase Type Iva In
Complex With Guanosine
pdb|4DTB|B Chain B, Crystal Structure Of F95y
Aminoglycoside-2''-Phosphotransferase Type Iva In
Complex With Guanosine
Length = 309
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 220 KGLMHLHEEILPNKAD-SYKPAVAHRDFKSNNVLLKSDLTA--AIADFGLALLFEP 272
K + + +IL N+ Y P + H DF S+++L ++ I DFG A + +P
Sbjct: 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 226
>pdb|4DT8|A Chain A, Crystal Structure Of Aminoglycoside-2''-Phosphotransferase
Type Iva In Complex With Adenosine
pdb|4DT8|B Chain B, Crystal Structure Of Aminoglycoside-2''-Phosphotransferase
Type Iva In Complex With Adenosine
pdb|4DT9|A Chain A, Crystal Structure Of Aminoglycoside-2''-Phosphotransferase
Type Iva In Complex With Guanosine
pdb|4DT9|B Chain B, Crystal Structure Of Aminoglycoside-2''-Phosphotransferase
Type Iva In Complex With Guanosine
Length = 309
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 220 KGLMHLHEEILPNKAD-SYKPAVAHRDFKSNNVLLKSDLTA--AIADFGLALLFEP 272
K + + +IL N+ Y P + H DF S+++L ++ I DFG A + +P
Sbjct: 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 226
>pdb|3N4T|A Chain A, Apo Aph(2")-Iva Form I
pdb|3N4U|A Chain A, App Aph(2")-Iva Form Ii
Length = 301
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 220 KGLMHLHEEILPNKAD-SYKPAVAHRDFKSNNVLLKSDLTA--AIADFGLALLFEP 272
K + + +IL N+ Y P + H DF S+++L ++ I DFG A + +P
Sbjct: 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 226
>pdb|4DTA|A Chain A, Crystal Structure Of F95m
Aminoglycoside-2''-Phosphotransferase Type Iva In
Complex With Adenosine
pdb|4DTA|B Chain B, Crystal Structure Of F95m
Aminoglycoside-2''-Phosphotransferase Type Iva In
Complex With Adenosine
Length = 309
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 220 KGLMHLHEEILPNKAD-SYKPAVAHRDFKSNNVLLKSDLTA--AIADFGLALLFEP 272
K + + +IL N+ Y P + H DF S+++L ++ I DFG A + +P
Sbjct: 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 226
>pdb|4DBX|A Chain A, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(2")- IdAPH(2")-Iva
pdb|4DE4|A Chain A, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(2")- IdAPH(2")-Iva In Complex With Hepes
pdb|4DE4|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(2")- IdAPH(2")-Iva In Complex With Hepes
pdb|4DFB|A Chain A, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(2")- IdAPH(2")-Iva In Complex With Kanamycin
pdb|4DFB|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(2")- IdAPH(2")-Iva In Complex With Kanamycin
pdb|4DFU|A Chain A, Inhibition Of An Antibiotic Resistance Enzyme: Crystal
Structure Of Aminoglycoside Phosphotransferase
Aph(2")-IdAPH(2")-Iva In Complex With Kanamycin
Inhibited With Quercetin
pdb|4DFU|B Chain B, Inhibition Of An Antibiotic Resistance Enzyme: Crystal
Structure Of Aminoglycoside Phosphotransferase
Aph(2")-IdAPH(2")-Iva In Complex With Kanamycin
Inhibited With Quercetin
Length = 322
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 220 KGLMHLHEEILPNKAD-SYKPAVAHRDFKSNNVLLKSDLTA--AIADFGLALLFEP 272
K + + +IL N+ Y P + H DF S+++L ++ I DFG A + +P
Sbjct: 192 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP 247
>pdb|4DY0|A Chain A, Crystal Structure Of Native Protease Nexin-1 With Heparin
pdb|4DY0|B Chain B, Crystal Structure Of Native Protease Nexin-1 With Heparin
pdb|4DY7|C Chain C, Crystal Structures Of Protease Nexin-1 In Complex With
S195a Thrombin
pdb|4DY7|F Chain F, Crystal Structures Of Protease Nexin-1 In Complex With
S195a Thrombin
Length = 379
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 125 FGAVWKAKFKNENVAVKIFLMQDKQSWQ----SEQEIFKLPHMEHDNIL--RYIGAEKRG 178
F +WK++F+ EN + F+ D +S+Q ++ +F+ N L +I G
Sbjct: 170 FKGLWKSRFQPENTKKRTFVAADGKSYQVPMLAQLSVFRCGSTSAPNDLWYNFIELPYHG 229
Query: 179 ESI 181
ESI
Sbjct: 230 ESI 232
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 78/208 (37%), Gaps = 46/208 (22%)
Query: 115 QLVEVKAQGRFGAVWKA---KFKNENVAVKIFLMQDKQSWQSEQEIFKLPHMEHDNILRY 171
++V+ +G FG V + K +VAVKI D+ + EI L H+ +
Sbjct: 17 EIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNST 76
Query: 172 IGAEKRGESIHTEFWLITAYHERG-SLCDFLKCNIVT---WEQLCRIALSMSKGLMHLHE 227
+ E + + G S DF+K N + + ++A + K + LH
Sbjct: 77 FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH- 135
Query: 228 EILPNKADSYKPAVAHRDFKSNNVL-LKSDLTAA------------------IADFGLAL 268
NK + H D K N+L ++SD T A + DFG A
Sbjct: 136 ---SNK-------LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA- 184
Query: 269 LFEPGKPCGDTHGQ--VGTRRYMAPEVL 294
D H V TR Y APEV+
Sbjct: 185 ------TYDDEHHSTLVSTRHYRAPEVI 206
>pdb|1LW3|A Chain A, Crystal Structure Of Myotubularin-Related Protein 2
Complexed With Phosphate
pdb|1M7R|A Chain A, Crystal Structure Of Myotubularin-Related Protein-2
(Mtmr2) Complexed With Phosphate
pdb|1M7R|B Chain B, Crystal Structure Of Myotubularin-Related Protein-2
(Mtmr2) Complexed With Phosphate
Length = 657
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 175 EKRGESIHTEFWLITAYHERGSLCDFLKCNIVT-----WEQLCRIALSMSKG 221
E R + I E W IT +ER LCD +V E+L R+A S+G
Sbjct: 217 EYRRQGIPNESWRITKINERYELCDTYPALLVVPANIPDEELKRVASFRSRG 268
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,249,163
Number of Sequences: 62578
Number of extensions: 568170
Number of successful extensions: 2962
Number of sequences better than 100.0: 995
Number of HSP's better than 100.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 462
Number of HSP's that attempted gapping in prelim test: 1672
Number of HSP's gapped (non-prelim): 1053
length of query: 461
length of database: 14,973,337
effective HSP length: 102
effective length of query: 359
effective length of database: 8,590,381
effective search space: 3083946779
effective search space used: 3083946779
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)