Query psy17538
Match_columns 164
No_of_seqs 116 out of 408
Neff 7.4
Searched_HMMs 13730
Date Sat Aug 17 01:06:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17538.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17538hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nzna_ a.118.8.1 (A:) Mitocho 54.0 5.7 0.00042 25.3 3.4 30 117-155 70-99 (122)
2 d1zu2a1 a.118.8.1 (A:1-145) Mi 43.0 8.2 0.00059 25.0 2.9 36 119-154 31-67 (145)
3 d1tjca_ a.118.8.1 (A:) Prolyl 41.6 11 0.00078 22.4 3.1 30 117-155 44-73 (95)
4 d1hh8a_ a.118.8.1 (A:) Neutrop 36.9 11 0.00084 25.4 3.0 13 121-133 38-50 (192)
5 d1osha_ a.123.1.1 (A:) Bile ac 34.4 15 0.0011 25.9 3.4 33 17-52 171-203 (231)
6 d1eaka1 a.20.1.2 (A:32-107) Ge 31.4 48 0.0035 19.5 5.3 45 2-47 1-47 (76)
7 d1xnfa_ a.118.8.1 (A:) Lipopro 30.7 25 0.0018 23.6 4.0 30 117-155 35-64 (259)
8 d2hr2a1 a.118.8.8 (A:2-157) Hy 29.8 27 0.002 22.2 3.9 34 117-159 98-131 (156)
9 d2p54a1 a.123.1.1 (A:202-468) 26.9 25 0.0018 25.5 3.6 33 17-52 203-235 (267)
10 d3d7ca1 a.29.2.1 (A:731-832) G 26.9 62 0.0045 19.4 6.6 56 12-74 40-97 (102)
11 d1zu2a1 a.118.8.1 (A:1-145) Mi 26.8 70 0.0051 20.0 6.3 38 118-155 74-113 (145)
12 d2b50b1 a.123.1.1 (B:211-475) 24.7 29 0.0021 25.0 3.6 32 17-51 203-234 (265)
13 d1n46a_ a.123.1.1 (A:) Thyroid 24.4 31 0.0022 24.5 3.6 32 17-51 189-220 (251)
14 d1klxa_ a.118.18.1 (A:) Cystei 23.5 39 0.0029 20.8 3.7 15 141-155 108-122 (133)
15 d2c2la1 a.118.8.1 (A:24-224) S 23.5 30 0.0022 22.2 3.2 13 144-156 88-100 (201)
16 d2fvja1 a.123.1.1 (A:207-477) 22.7 34 0.0025 24.7 3.6 33 17-52 207-239 (271)
17 d1pq9a_ a.123.1.1 (A:) Oxyster 22.5 35 0.0026 23.9 3.6 33 17-52 180-212 (239)
18 d1fcya_ a.123.1.1 (A:) Retinoi 22.2 36 0.0026 23.8 3.6 33 17-52 176-208 (236)
19 d1ouva_ a.118.18.1 (A:) Cystei 22.2 39 0.0029 22.9 3.7 33 119-156 178-210 (265)
20 d3dwya1 a.29.2.1 (A:1084-1197) 21.5 86 0.0062 19.2 6.0 31 12-46 47-77 (114)
21 d1slma1 a.20.1.2 (A:16-80) Str 20.2 15 0.0011 21.1 0.8 18 140-157 24-41 (65)
No 1
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.97 E-value=5.7 Score=25.28 Aligned_cols=30 Identities=17% Similarity=0.120 Sum_probs=23.1
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHHHH
Q psy17538 117 ERVCVLFNIAALQSAIAQAQSLDTDEGLKLAAKMLQSSA 155 (164)
Q Consensus 117 E~a~vLfNiaa~~s~~a~~~~~~~~~~~K~A~~~fq~AA 155 (164)
.++.++||+|.+|.++| ...+|..+|++|-
T Consensus 70 ~~~~~~~~Lg~~y~~~g---------~~~~A~~~~~~aL 99 (122)
T d1nzna_ 70 EQRDYVFYLAVGNYRLK---------EYEKALKYVRGLL 99 (122)
T ss_dssp HHHHHHHHHHHHHHHTT---------CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHh---------hhHHHHHHHHHHH
Confidence 55678999999998775 3577888888764
No 2
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=43.01 E-value=8.2 Score=25.02 Aligned_cols=36 Identities=14% Similarity=0.099 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHhCC-CCChhhHHHHHHHHHHH
Q psy17538 119 VCVLFNIAALQSAIAQAQS-LDTDEGLKLAAKMLQSS 154 (164)
Q Consensus 119 a~vLfNiaa~~s~~a~~~~-~~~~~~~K~A~~~fq~A 154 (164)
+.+++|+|.++..++-... ....+.+.+|..+|++|
T Consensus 31 ~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kA 67 (145)
T d1zu2a1 31 ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEA 67 (145)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 3466677776666554431 11223345555555554
No 3
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.61 E-value=11 Score=22.44 Aligned_cols=30 Identities=17% Similarity=0.092 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHHHH
Q psy17538 117 ERVCVLFNIAALQSAIAQAQSLDTDEGLKLAAKMLQSSA 155 (164)
Q Consensus 117 E~a~vLfNiaa~~s~~a~~~~~~~~~~~K~A~~~fq~AA 155 (164)
.++.+++|+|.+|.++|- ..+|..+|++|-
T Consensus 44 ~~~~~l~~Lg~~~~~~g~---------~~~A~~~y~~aL 73 (95)
T d1tjca_ 44 DKVSVLDYLSYAVYQQGD---------LDKALLLTKKLL 73 (95)
T ss_dssp CHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHH
T ss_pred cHHHHHHHHhhHHHhcCC---------hHHHHHHHHHHH
Confidence 567899999998876643 577777777764
No 4
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.88 E-value=11 Score=25.35 Aligned_cols=13 Identities=23% Similarity=0.554 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHH
Q psy17538 121 VLFNIAALQSAIA 133 (164)
Q Consensus 121 vLfNiaa~~s~~a 133 (164)
++||+|.+|..+|
T Consensus 38 ~~~nlG~~~~~~g 50 (192)
T d1hh8a_ 38 ICFNIGCMYTILK 50 (192)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 5677777775543
No 5
>d1osha_ a.123.1.1 (A:) Bile acid receptor FXR {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.37 E-value=15 Score=25.88 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=27.7
Q ss_pred chHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHH
Q psy17538 17 IIKPLKNLIALQFPNDNEKLDILNEKLNLFSKLRTA 52 (164)
Q Consensus 17 ~~~~l~~~I~~~y~~~~~~~~~~~~dl~~l~~LR~~ 52 (164)
+..+|.+|+..+|. +.|..|.+-+..|-.||.-
T Consensus 171 ~~~aL~~y~~~~~p---~~~~rf~~LL~~L~~LR~l 203 (231)
T d1osha_ 171 LLDVLQKLCKIHQP---ENPQHFACLLGRLTELRTF 203 (231)
T ss_dssp HHHHHHHHHHHHCT---TCTTHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHCC---CchhHHHHHHHHHHHHHHH
Confidence 45689999999998 5678999999999999863
No 6
>d1eaka1 a.20.1.2 (A:32-107) Gelatinase A (MMP-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.36 E-value=48 Score=19.55 Aligned_cols=45 Identities=11% Similarity=0.116 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHhhCCCC--cccHHHHHHHHHHHH
Q psy17538 2 AEFLAVPLKKPTDVDIIKPLKNLIALQFPND--NEKLDILNEKLNLFS 47 (164)
Q Consensus 2 ~~~l~iPlK~t~~~d~~~~l~~~I~~~y~~~--~~~~~~~~~dl~~l~ 47 (164)
+|++..|.-.+.+.|.. -.++|+.+-|+-. ......+++.|++++
T Consensus 1 s~~~~fP~~~~~~~d~e-~A~~YL~~fgyl~~~~~~~~~l~~ai~~~Q 47 (76)
T d1eaka1 1 SPIIKFPGDVAPKTDKE-LAVQYLNTFYGCPKESCNLFVLKDTLKKMQ 47 (76)
T ss_dssp CCCCCCTTCCCCCCHHH-HHHHHHHHHTCCCSSCCCHHHHHHHHHHHH
T ss_pred CCcccCCCCCCCcccHH-HHHHHHHHhCCCCcCCCccHHHHHHHHHHH
Confidence 47888887666666664 3568998876522 112334444444443
No 7
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=30.70 E-value=25 Score=23.62 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHHHH
Q psy17538 117 ERVCVLFNIAALQSAIAQAQSLDTDEGLKLAAKMLQSSA 155 (164)
Q Consensus 117 E~a~vLfNiaa~~s~~a~~~~~~~~~~~K~A~~~fq~AA 155 (164)
+++.++||+|.+|...|- .++|..+|++|-
T Consensus 35 ~~a~~~~~~G~~y~~~g~---------~~~A~~~~~~al 64 (259)
T d1xnfa_ 35 ERAQLLYERGVLYDSLGL---------RALARNDFSQAL 64 (259)
T ss_dssp HHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCC---------HHHHHHHHHHhh
Confidence 577788888888876642 355666666554
No 8
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=29.82 E-value=27 Score=22.19 Aligned_cols=34 Identities=6% Similarity=0.064 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHHHHHHHH
Q psy17538 117 ERVCVLFNIAALQSAIAQAQSLDTDEGLKLAAKMLQSSAGIFN 159 (164)
Q Consensus 117 E~a~vLfNiaa~~s~~a~~~~~~~~~~~K~A~~~fq~AAg~f~ 159 (164)
..+.+++|+|.+|..+|- ..+|+.+|++|--++.
T Consensus 98 ~~~~a~~~~g~~~~~lg~---------~eeA~~~~~~Al~l~~ 131 (156)
T d2hr2a1 98 LWISAVYSRALALDGLGR---------GAEAMPEFKKVVEMIE 131 (156)
T ss_dssp HHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHH
T ss_pred hhHHHHhhhHHHHHHHHH---------HHHHHHHHHHHHHhhH
Confidence 345689999999987763 5688888888876654
No 9
>d2p54a1 a.123.1.1 (A:202-468) Peroxisome proliferator activated receptor alpha, PPAR-alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.92 E-value=25 Score=25.46 Aligned_cols=33 Identities=18% Similarity=0.347 Sum_probs=27.5
Q ss_pred chHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHH
Q psy17538 17 IIKPLKNLIALQFPNDNEKLDILNEKLNLFSKLRTA 52 (164)
Q Consensus 17 ~~~~l~~~I~~~y~~~~~~~~~~~~dl~~l~~LR~~ 52 (164)
+..+|..|+..+|. ++|..|.+-+..|-.||.-
T Consensus 203 ~~~aL~~y~~~~~p---~~~~rf~kLL~~Lp~LR~l 235 (267)
T d2p54a1 203 IVHVLRLHLQSNHP---DDIFLFPKLLQKMADLRQL 235 (267)
T ss_dssp HHHHHHHHHHHHCT---TCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC---ChhhHHHHHHHHhHHHHHH
Confidence 34679999999998 6678999999999999863
No 10
>d3d7ca1 a.29.2.1 (A:731-832) GCN5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.90 E-value=62 Score=19.45 Aligned_cols=56 Identities=5% Similarity=0.119 Sum_probs=30.5
Q ss_pred CCCCCchHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHHHhhhccCCChh--hHHHHHHHHHH
Q psy17538 12 PTDVDIIKPLKNLIALQFPNDNEKLDILNEKLNLFSKLRTAAVWKVFEKHES--SLEVIYSYYDH 74 (164)
Q Consensus 12 t~~~d~~~~l~~~I~~~y~~~~~~~~~~~~dl~~l~~LR~~~~~~~~~~~~~--~~~~l~~Yy~q 74 (164)
+.|+||.. +++=|.+... .+++.|..|+..+- ++....+. ..+.- ....|.++|.+
T Consensus 40 ~~PmdL~t-I~~kl~~~~Y---~s~~~f~~D~~li~--~Na~~yN~-~~s~~~~~A~~l~~~f~~ 97 (102)
T d3d7ca1 40 RFPIDLKT-MTERLRSRYY---VTRKLFVADLQRVI--ANCREYNP-PDSEYCRCASALEKFFYF 97 (102)
T ss_dssp SSCCCHHH-HHHHHHTTCC---CSHHHHHHHHHHHH--HHHHHHSC-TTSHHHHHHHHHHHHHHH
T ss_pred CCccCHHH-HHHHhccCcc---CCHHHHHHHHHHHH--HHHHHHCC-CCCHHHHHHHHHHHHHHH
Confidence 45789876 5555555444 35778999988652 22332232 22221 23566666643
No 11
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=26.84 E-value=70 Score=20.00 Aligned_cols=38 Identities=13% Similarity=0.210 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCC--ChhhHHHHHHHHHHHH
Q psy17538 118 RVCVLFNIAALQSAIAQAQSLD--TDEGLKLAAKMLQSSA 155 (164)
Q Consensus 118 ~a~vLfNiaa~~s~~a~~~~~~--~~~~~K~A~~~fq~AA 155 (164)
-+..++|+|.+|..+|...... ..+...+|..+|++|-
T Consensus 74 ~~~a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal 113 (145)
T d1zu2a1 74 KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAV 113 (145)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHhhHHHHHHHcccchhhHHHHHHhHHHhhhhhhccc
Confidence 3456889999998887654221 1123455555555543
No 12
>d2b50b1 a.123.1.1 (B:211-475) Peroxisome proliferator-activated receptor delta, PPAR-DELTA {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.74 E-value=29 Score=25.01 Aligned_cols=32 Identities=19% Similarity=0.404 Sum_probs=26.6
Q ss_pred chHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHH
Q psy17538 17 IIKPLKNLIALQFPNDNEKLDILNEKLNLFSKLRT 51 (164)
Q Consensus 17 ~~~~l~~~I~~~y~~~~~~~~~~~~dl~~l~~LR~ 51 (164)
+.++|..|+..+|. +.+..|.+-+..|-.||.
T Consensus 203 ~~~aL~~y~~~~~p---~~~~rfakLL~~L~~LR~ 234 (265)
T d2b50b1 203 ILRALEFHLQANHP---DAQQLFPKLLQKMADLRQ 234 (265)
T ss_dssp HHHHHHHHHHHHCT---TCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC---ChhhHHHHHHHHHHHHHH
Confidence 45778999999998 567789999998888885
No 13
>d1n46a_ a.123.1.1 (A:) Thyroid hormone receptor beta (TR-beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.36 E-value=31 Score=24.55 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=26.1
Q ss_pred chHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHH
Q psy17538 17 IIKPLKNLIALQFPNDNEKLDILNEKLNLFSKLRT 51 (164)
Q Consensus 17 ~~~~l~~~I~~~y~~~~~~~~~~~~dl~~l~~LR~ 51 (164)
+..+|+.||..+|. ..+..|.+-+..|-.||.
T Consensus 189 ~~~aL~~yi~~~~p---~~~~rf~kLL~~Lp~LR~ 220 (251)
T d1n46a_ 189 FLLAFEHYINYRKH---HVTHFWPKLLMKVTDLRM 220 (251)
T ss_dssp HHHHHHHHHHHHCC---SSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC---CcccHHHHHHHHhHHHHH
Confidence 45678999999888 567788888888888885
No 14
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=23.51 E-value=39 Score=20.81 Aligned_cols=15 Identities=20% Similarity=0.180 Sum_probs=9.3
Q ss_pred hhhHHHHHHHHHHHH
Q psy17538 141 DEGLKLAAKMLQSSA 155 (164)
Q Consensus 141 ~~~~K~A~~~fq~AA 155 (164)
..+.++|..+|++||
T Consensus 108 ~~d~~~A~~~~~~Aa 122 (133)
T d1klxa_ 108 VKNEKQAVKTFEKAC 122 (133)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 345666666666665
No 15
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.47 E-value=30 Score=22.16 Aligned_cols=13 Identities=23% Similarity=0.067 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHH
Q psy17538 144 LKLAAKMLQSSAG 156 (164)
Q Consensus 144 ~K~A~~~fq~AAg 156 (164)
..+|...|++|-.
T Consensus 88 ~~~A~~~~~~al~ 100 (201)
T d2c2la1 88 YDEAIANLQRAYS 100 (201)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4555555555543
No 16
>d2fvja1 a.123.1.1 (A:207-477) Peroxisome proliferator activated receptor gamma, PPAR-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.75 E-value=34 Score=24.70 Aligned_cols=33 Identities=21% Similarity=0.433 Sum_probs=27.2
Q ss_pred chHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHH
Q psy17538 17 IIKPLKNLIALQFPNDNEKLDILNEKLNLFSKLRTA 52 (164)
Q Consensus 17 ~~~~l~~~I~~~y~~~~~~~~~~~~dl~~l~~LR~~ 52 (164)
+..+|..|+..+|. +.|..|.+-+..|-.||.-
T Consensus 207 ~~~aL~~y~~~~~p---~~~~rf~kLL~~Lp~LR~l 239 (271)
T d2fvja1 207 LLQALELQLKLNHP---ESSQLFAKLLQKMTDLRQI 239 (271)
T ss_dssp HHHHHHHHHHHHST---TSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC---CchhHHHHHHHHhHHHHHH
Confidence 45678999999998 5677899999999999863
No 17
>d1pq9a_ a.123.1.1 (A:) Oxysterols receptor LXR-beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.54 E-value=35 Score=23.88 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=27.2
Q ss_pred chHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHH
Q psy17538 17 IIKPLKNLIALQFPNDNEKLDILNEKLNLFSKLRTA 52 (164)
Q Consensus 17 ~~~~l~~~I~~~y~~~~~~~~~~~~dl~~l~~LR~~ 52 (164)
+..+|..|+..+|. ++|..|.+-+..|-.||.-
T Consensus 180 ~~~aL~~y~~~~~p---~~~~rf~~LL~~L~~LR~l 212 (239)
T d1pq9a_ 180 YVEALLSYTRIKRP---QDQLRFPRMLMKLVSLRTL 212 (239)
T ss_dssp HHHHHHHHHHHHCT---TCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC---CcccHHHHHHHHHHHHHHH
Confidence 45688999999998 6677899999989888863
No 18
>d1fcya_ a.123.1.1 (A:) Retinoic acid receptor gamma (RAR-gamma) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.23 E-value=36 Score=23.77 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=26.0
Q ss_pred chHHHHHHHHhhCCCCcccHHHHHHHHHHHHHHHHH
Q psy17538 17 IIKPLKNLIALQFPNDNEKLDILNEKLNLFSKLRTA 52 (164)
Q Consensus 17 ~~~~l~~~I~~~y~~~~~~~~~~~~dl~~l~~LR~~ 52 (164)
+..+|+.|+..+|. +.|..|.+-|..|-.||.-
T Consensus 176 ~~~aL~~y~~~~~~---~~~~rf~~LL~~Lp~LR~l 208 (236)
T d1fcya_ 176 LLEALRLYARRRRP---SQPYMFPRMLMKITDLRGI 208 (236)
T ss_dssp HHHHHHHHHHHHCT---TCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC---CchhHHHHHHHHHHHHHHH
Confidence 45678899999888 5577888888888888863
No 19
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=22.18 E-value=39 Score=22.90 Aligned_cols=33 Identities=12% Similarity=0.042 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCChhhHHHHHHHHHHHHH
Q psy17538 119 VCVLFNIAALQSAIAQAQSLDTDEGLKLAAKMLQSSAG 156 (164)
Q Consensus 119 a~vLfNiaa~~s~~a~~~~~~~~~~~K~A~~~fq~AAg 156 (164)
...+||+|.+|.. ......+.++|+.+|++|+.
T Consensus 178 ~~A~~~lg~~y~~-----g~~~~~d~~~A~~~~~~aa~ 210 (265)
T d1ouva_ 178 SPGCFNAGNMYHH-----GEGATKNFKEALARYSKACE 210 (265)
T ss_dssp HHHHHHHHHHHHH-----TCSSCCCHHHHHHHHHHHHH
T ss_pred cccccchhhhccc-----CcccccchhhhhhhHhhhhc
Confidence 5566777776633 12233458888888888864
No 20
>d3dwya1 a.29.2.1 (A:1084-1197) CREB-binding protein, CBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.53 E-value=86 Score=19.16 Aligned_cols=31 Identities=10% Similarity=0.041 Sum_probs=21.2
Q ss_pred CCCCCchHHHHHHHHhhCCCCcccHHHHHHHHHHH
Q psy17538 12 PTDVDIIKPLKNLIALQFPNDNEKLDILNEKLNLF 46 (164)
Q Consensus 12 t~~~d~~~~l~~~I~~~y~~~~~~~~~~~~dl~~l 46 (164)
..|+||.. +++=|.+... .++++|..|+..+
T Consensus 47 ~~PmdL~t-I~~kl~~~~Y---~s~~ef~~Dv~li 77 (114)
T d3dwya1 47 KNPMDLST-IKRKLDTGQY---QEPWQYVDDVWLM 77 (114)
T ss_dssp SSCCCHHH-HHHHHHTTCC---SSHHHHHHHHHHH
T ss_pred CCCCCHHH-HHHHHHcCcc---ccHHHHHHHHHHH
Confidence 36789977 5555555444 3678899998865
No 21
>d1slma1 a.20.1.2 (A:16-80) Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibroblast [TaxId: 9606]}
Probab=20.18 E-value=15 Score=21.08 Aligned_cols=18 Identities=11% Similarity=0.124 Sum_probs=14.4
Q ss_pred ChhhHHHHHHHHHHHHHH
Q psy17538 140 TDEGLKLAAKMLQSSAGI 157 (164)
Q Consensus 140 ~~~~~K~A~~~fq~AAg~ 157 (164)
+.+.++.|++.||+.+|+
T Consensus 24 ~~~~l~~Ai~~~Q~f~~L 41 (65)
T d1slma1 24 DSGPVVKKIREMQKFLGL 41 (65)
T ss_dssp -CHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHcCC
Confidence 566799999999998763
Done!