Query psy17541
Match_columns 717
No_of_seqs 267 out of 1339
Neff 4.4
Searched_HMMs 29240
Date Sat Aug 17 01:12:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17541.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17541hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3a11_A Translation initiation 100.0 6.9E-70 2.4E-74 578.2 31.0 304 401-712 21-325 (338)
2 2yvk_A Methylthioribose-1-phos 100.0 3.9E-65 1.3E-69 547.8 30.9 301 402-713 58-369 (374)
3 1t5o_A EIF2BD, translation ini 100.0 1.4E-64 5E-69 539.7 31.4 298 402-712 31-339 (351)
4 1t9k_A Probable methylthioribo 100.0 1.4E-64 4.8E-69 539.1 29.2 296 401-710 35-341 (347)
5 2a0u_A Initiation factor 2B; S 100.0 6.6E-64 2.2E-68 539.7 31.4 296 402-705 47-370 (383)
6 1vb5_A Translation initiation 100.0 3.9E-64 1.3E-68 520.5 27.5 274 399-706 2-275 (276)
7 3ecs_A Translation initiation 100.0 1.8E-62 6.1E-67 517.0 24.3 281 418-710 19-301 (315)
8 1w2w_B 5-methylthioribose-1-ph 100.0 3.7E-47 1.3E-51 375.8 10.3 159 549-707 2-184 (191)
9 1w2w_A 5-methylthioribose-1-ph 99.7 1.9E-16 6.4E-21 159.0 13.6 147 402-552 37-208 (211)
10 1uj6_A Ribose 5-phosphate isom 98.2 5.5E-06 1.9E-10 83.9 9.9 116 511-642 8-130 (227)
11 2f8m_A Ribose 5-phosphate isom 97.9 2.1E-05 7.3E-10 80.6 9.1 122 508-643 9-138 (244)
12 1lk5_A D-ribose-5-phosphate is 97.8 4.6E-05 1.6E-09 77.3 9.7 118 511-643 6-130 (229)
13 1m0s_A Ribose-5-phosphate isom 97.8 2.5E-05 8.6E-10 78.8 7.7 119 511-643 6-126 (219)
14 3kwm_A Ribose-5-phosphate isom 97.7 8E-05 2.8E-09 75.5 8.5 119 511-643 12-132 (224)
15 1xtz_A Ribose-5-phosphate isom 97.6 0.00013 4.3E-09 75.7 7.8 118 511-642 21-152 (264)
16 3l7o_A Ribose-5-phosphate isom 97.5 0.00023 7.7E-09 72.3 8.2 118 511-643 4-127 (225)
17 3hhe_A Ribose-5-phosphate isom 97.5 0.00027 9.4E-09 72.9 9.0 119 511-643 27-149 (255)
18 1o8b_A Ribose 5-phosphate isom 97.5 2.5E-05 8.5E-10 78.9 1.2 119 511-643 6-126 (219)
19 2pjm_A Ribose-5-phosphate isom 97.4 0.00063 2.1E-08 69.1 10.6 117 511-643 6-129 (226)
20 3uw1_A Ribose-5-phosphate isom 96.9 0.0018 6.2E-08 66.3 7.6 119 511-643 14-138 (239)
21 4gmk_A Ribose-5-phosphate isom 90.4 1.1 3.9E-05 45.5 9.8 115 511-643 7-130 (228)
22 3ic5_A Putative saccharopine d 86.8 6.9 0.00024 32.8 11.0 99 526-640 5-106 (118)
23 3g0t_A Putative aminotransfera 86.2 4.6 0.00016 41.9 11.4 104 524-632 104-220 (437)
24 3i6i_A Putative leucoanthocyan 85.6 4.5 0.00015 41.2 10.9 102 526-634 10-118 (346)
25 3ixq_A Ribose-5-phosphate isom 85.4 2.4 8.2E-05 43.1 8.5 119 511-643 6-129 (226)
26 1poi_B Glutaconate coenzyme A- 83.8 6.6 0.00023 40.3 11.1 92 512-611 8-116 (260)
27 3hgm_A Universal stress protei 82.6 12 0.0004 32.7 10.9 61 569-633 76-147 (147)
28 2hj0_A Putative citrate lyase, 82.4 14 0.00047 41.6 13.8 148 512-705 253-454 (519)
29 4dq6_A Putative pyridoxal phos 79.3 9.4 0.00032 38.6 10.3 101 525-632 90-202 (391)
30 3s3t_A Nucleotide-binding prot 78.8 16 0.00054 31.8 10.5 60 570-633 76-145 (146)
31 1jw9_B Molybdopterin biosynthe 78.5 7 0.00024 39.1 9.0 109 515-634 21-153 (249)
32 3llv_A Exopolyphosphatase-rela 78.1 9.4 0.00032 33.8 8.8 90 526-632 6-100 (141)
33 3e8x_A Putative NAD-dependent 78.0 4.5 0.00015 38.8 7.1 98 525-637 20-132 (236)
34 3h14_A Aminotransferase, class 77.6 13 0.00043 38.0 10.8 102 524-632 90-199 (391)
35 3dlo_A Universal stress protei 77.5 32 0.0011 31.0 12.4 103 527-633 26-154 (155)
36 3c85_A Putative glutathione-re 76.3 12 0.00042 34.6 9.4 86 526-627 39-130 (183)
37 2bfw_A GLGA glycogen synthase; 76.3 12 0.0004 34.3 9.2 100 523-633 33-145 (200)
38 3trj_A Phosphoheptose isomeras 74.9 34 0.0012 32.9 12.5 39 591-636 112-150 (201)
39 1qz9_A Kynureninase; kynurenin 74.5 20 0.00068 36.7 11.3 100 526-632 89-200 (416)
40 3rrl_A Succinyl-COA:3-ketoacid 74.2 8.3 0.00029 39.0 8.2 22 593-614 151-172 (235)
41 3dqp_A Oxidoreductase YLBE; al 74.0 8.2 0.00028 36.5 7.7 100 528-636 2-106 (219)
42 1t3i_A Probable cysteine desul 73.5 68 0.0023 32.5 14.9 99 526-632 91-204 (420)
43 3idf_A USP-like protein; unive 73.4 6.8 0.00023 34.0 6.5 61 569-633 72-137 (138)
44 2z08_A Universal stress protei 73.4 45 0.0015 28.8 11.9 37 593-633 99-136 (137)
45 3l9w_A Glutathione-regulated p 73.3 7.2 0.00025 42.2 7.9 94 525-635 3-103 (413)
46 2dr1_A PH1308 protein, 386AA l 72.3 29 0.001 34.8 11.8 97 528-632 74-181 (386)
47 1eg5_A Aminotransferase; PLP-d 72.3 66 0.0023 32.0 14.3 99 526-632 62-176 (384)
48 2yv1_A Succinyl-COA ligase [AD 70.6 5.2 0.00018 41.4 5.8 105 525-631 70-178 (294)
49 3rrl_B Succinyl-COA:3-ketoacid 70.6 3.4 0.00012 41.2 4.2 94 512-612 2-111 (207)
50 3kax_A Aminotransferase, class 70.4 19 0.00065 36.2 9.9 101 525-632 82-194 (383)
51 3fdx_A Putative filament prote 69.8 39 0.0013 29.2 10.6 36 593-633 106-142 (143)
52 3fdb_A Beta C-S lyase, putativ 69.2 22 0.00077 35.7 10.1 102 524-632 80-188 (377)
53 1qyd_A Pinoresinol-lariciresin 69.1 18 0.00063 35.7 9.3 103 526-633 4-114 (313)
54 1k6d_A Acetate COA-transferase 69.0 15 0.00051 36.4 8.5 43 593-641 148-194 (220)
55 3dzz_A Putative pyridoxal 5'-p 68.8 24 0.00083 35.5 10.3 101 525-632 85-198 (391)
56 2gm3_A Unknown protein; AT3G01 68.6 17 0.00058 33.1 8.3 42 593-638 124-166 (175)
57 2huf_A Alanine glyoxylate amin 68.5 29 0.00099 35.1 10.8 98 527-632 72-179 (393)
58 1svv_A Threonine aldolase; str 68.4 16 0.00055 36.2 8.7 102 525-632 66-182 (359)
59 2z61_A Probable aspartate amin 68.4 24 0.00081 35.7 10.1 97 525-632 89-188 (370)
60 4gx0_A TRKA domain protein; me 68.3 5.6 0.00019 44.0 5.8 106 518-634 315-440 (565)
61 1oi7_A Succinyl-COA synthetase 68.1 5.6 0.00019 41.1 5.4 105 525-631 64-172 (288)
62 1jeo_A MJ1247, hypothetical pr 67.7 33 0.0011 31.6 10.2 83 518-601 32-133 (180)
63 3tnj_A Universal stress protei 67.2 40 0.0014 29.5 10.2 39 593-635 109-147 (150)
64 1zud_1 Adenylyltransferase THI 67.1 30 0.001 34.7 10.4 109 515-634 18-150 (251)
65 2yvq_A Carbamoyl-phosphate syn 67.0 25 0.00084 32.6 9.1 93 524-632 24-130 (143)
66 1xr4_A Putative citrate lyase 66.9 30 0.001 38.8 11.3 115 518-632 51-202 (509)
67 2o8r_A Polyphosphate kinase; s 66.6 7 0.00024 45.6 6.3 49 535-583 383-433 (705)
68 3sho_A Transcriptional regulat 66.2 51 0.0017 30.5 11.2 36 566-601 104-139 (187)
69 3fwz_A Inner membrane protein 66.2 15 0.00053 32.8 7.4 94 526-636 7-107 (140)
70 1x92_A APC5045, phosphoheptose 66.2 87 0.003 29.3 13.0 36 566-601 130-168 (199)
71 1elu_A L-cysteine/L-cystine C- 66.1 60 0.0021 32.5 12.5 98 527-632 78-193 (390)
72 2gas_A Isoflavone reductase; N 66.0 19 0.00065 35.4 8.6 99 526-633 2-110 (307)
73 3dfz_A SIRC, precorrin-2 dehyd 65.8 6.8 0.00023 39.3 5.3 93 525-634 30-122 (223)
74 3ab8_A Putative uncharacterize 65.5 35 0.0012 33.0 10.3 98 528-633 157-267 (268)
75 3mt0_A Uncharacterized protein 65.4 96 0.0033 30.5 13.6 98 536-639 22-132 (290)
76 1kmj_A Selenocysteine lyase; p 65.3 1.2E+02 0.004 30.5 15.6 99 526-632 86-199 (406)
77 2r6j_A Eugenol synthase 1; phe 65.3 17 0.00058 36.3 8.2 96 528-633 13-113 (318)
78 1qyc_A Phenylcoumaran benzylic 65.3 19 0.00065 35.4 8.5 99 526-633 4-111 (308)
79 2g1u_A Hypothetical protein TM 65.0 24 0.00083 31.9 8.5 93 524-633 17-116 (155)
80 3isl_A Purine catabolism prote 64.8 81 0.0028 32.0 13.3 94 531-632 68-171 (416)
81 2zc0_A Alanine glyoxylate tran 64.7 27 0.00092 35.7 9.7 102 525-632 98-213 (407)
82 3nbm_A PTS system, lactose-spe 64.6 8 0.00027 34.7 5.0 56 570-634 28-85 (108)
83 3cai_A Possible aminotransfera 63.9 58 0.002 33.1 12.0 99 526-632 87-200 (406)
84 2hmt_A YUAA protein; RCK, KTN, 63.8 23 0.00079 30.5 7.8 91 526-632 6-101 (144)
85 2ch1_A 3-hydroxykynurenine tra 63.8 38 0.0013 34.2 10.6 98 527-632 71-178 (396)
86 3d3u_A 4-hydroxybutyrate COA-t 63.6 41 0.0014 36.7 11.4 81 595-703 307-399 (439)
87 2yv2_A Succinyl-COA synthetase 63.6 7.3 0.00025 40.4 5.3 104 526-631 72-179 (297)
88 1vjo_A Alanine--glyoxylate ami 63.3 26 0.00088 35.5 9.2 98 527-632 87-194 (393)
89 1lss_A TRK system potassium up 63.0 26 0.00089 30.1 8.0 90 526-632 4-99 (140)
90 3lvm_A Cysteine desulfurase; s 62.7 77 0.0026 32.4 12.8 102 526-632 86-198 (423)
91 1j32_A Aspartate aminotransfer 62.6 39 0.0013 34.3 10.4 101 525-632 90-201 (388)
92 2wm3_A NMRA-like family domain 62.6 21 0.00071 35.3 8.2 108 526-637 5-116 (299)
93 2nu8_A Succinyl-COA ligase [AD 62.4 7.7 0.00026 39.9 5.1 105 525-631 64-172 (288)
94 1lc5_A COBD, L-threonine-O-3-p 62.4 43 0.0015 33.7 10.7 98 526-632 77-184 (364)
95 1m3s_A Hypothetical protein YC 62.4 56 0.0019 30.2 10.7 36 565-600 95-130 (186)
96 1c7n_A Cystalysin; transferase 62.4 39 0.0013 34.3 10.4 101 525-632 89-202 (399)
97 2w48_A Sorbitol operon regulat 62.0 14 0.00048 38.1 7.0 91 512-603 92-214 (315)
98 2x5d_A Probable aminotransfera 61.9 27 0.00092 36.0 9.2 100 526-632 100-210 (412)
99 4egb_A DTDP-glucose 4,6-dehydr 61.9 12 0.00042 37.6 6.5 111 525-636 23-149 (346)
100 3lk7_A UDP-N-acetylmuramoylala 61.8 20 0.00068 38.8 8.5 92 525-631 8-100 (451)
101 2oas_A ATOA, 4-hydroxybutyrate 61.6 10 0.00035 41.5 6.2 97 517-613 10-130 (436)
102 3ruf_A WBGU; rossmann fold, UD 61.6 49 0.0017 33.2 10.9 109 525-636 24-151 (351)
103 1vp4_A Aminotransferase, putat 61.5 42 0.0014 34.9 10.6 102 525-632 109-226 (425)
104 3ilh_A Two component response 61.3 7 0.00024 33.5 4.0 57 528-584 37-100 (146)
105 3ezs_A Aminotransferase ASPB; 61.3 47 0.0016 33.3 10.7 102 524-632 81-192 (376)
106 2z9v_A Aspartate aminotransfer 61.2 48 0.0016 33.5 10.7 99 526-632 60-169 (392)
107 1yaa_A Aspartate aminotransfer 61.1 58 0.002 33.4 11.5 102 525-632 96-214 (412)
108 3c1o_A Eugenol synthase; pheny 61.0 30 0.001 34.4 9.1 98 527-633 5-111 (321)
109 1vim_A Hypothetical protein AF 60.9 56 0.0019 31.0 10.7 35 566-600 106-140 (200)
110 1m32_A 2-aminoethylphosphonate 60.9 36 0.0012 33.7 9.6 98 527-632 58-166 (366)
111 2cb1_A O-acetyl homoserine sul 60.6 27 0.00093 36.4 9.1 98 527-632 73-175 (412)
112 3l8a_A METC, putative aminotra 60.6 68 0.0023 33.2 12.0 101 525-632 119-232 (421)
113 3qli_A Coenzyme A transferase; 60.5 15 0.00052 40.7 7.4 95 517-612 30-159 (455)
114 2gn4_A FLAA1 protein, UDP-GLCN 60.4 25 0.00087 36.1 8.6 111 525-638 20-144 (344)
115 4eb5_A Probable cysteine desul 60.4 1.4E+02 0.0048 29.7 14.5 97 526-629 61-170 (382)
116 3loq_A Universal stress protei 60.2 64 0.0022 31.8 11.3 104 528-635 173-290 (294)
117 2yva_A DNAA initiator-associat 59.8 1.1E+02 0.0038 28.4 13.0 35 566-600 126-163 (196)
118 3f9t_A TDC, L-tyrosine decarbo 59.6 87 0.003 31.2 12.2 100 525-632 86-206 (397)
119 3olq_A Universal stress protei 59.4 1E+02 0.0034 30.5 12.6 97 537-637 23-152 (319)
120 1y8q_A Ubiquitin-like 1 activa 59.3 1.1E+02 0.0037 32.2 13.4 108 515-633 26-156 (346)
121 2hj0_A Putative citrate lyase, 58.8 56 0.0019 36.7 11.6 115 519-633 55-206 (519)
122 2jcb_A 5-formyltetrahydrofolat 58.8 28 0.00095 34.1 8.2 107 510-624 34-157 (200)
123 3olq_A Universal stress protei 58.2 64 0.0022 32.0 10.9 64 568-635 233-305 (319)
124 3jtx_A Aminotransferase; NP_28 58.1 37 0.0013 34.4 9.3 104 524-632 89-206 (396)
125 3fg9_A Protein of universal st 58.1 89 0.0031 27.5 10.9 102 528-633 18-155 (156)
126 4ggj_A Mitochondrial cardiolip 57.8 15 0.0005 35.5 5.9 55 529-584 64-119 (196)
127 2q7w_A Aspartate aminotransfer 57.6 79 0.0027 31.9 11.7 102 525-632 92-210 (396)
128 1ydm_A Hypothetical protein YQ 57.5 30 0.001 33.3 8.1 104 511-617 24-139 (187)
129 3s2u_A UDP-N-acetylglucosamine 57.3 63 0.0022 33.4 11.1 92 527-634 181-279 (365)
130 2yrr_A Aminotransferase, class 57.3 29 0.00099 34.1 8.2 96 527-632 54-159 (353)
131 3mad_A Sphingosine-1-phosphate 57.0 37 0.0013 36.6 9.5 98 529-633 164-275 (514)
132 1iay_A ACC synthase 2, 1-amino 56.9 51 0.0017 34.1 10.3 103 523-632 106-226 (428)
133 2fp4_A Succinyl-COA ligase [GD 56.8 12 0.00041 39.0 5.4 105 525-631 71-180 (305)
134 3vax_A Putative uncharacterize 56.3 1.7E+02 0.0058 29.4 14.5 100 527-632 82-194 (400)
135 2e7j_A SEP-tRNA:Cys-tRNA synth 56.1 82 0.0028 31.3 11.4 96 527-632 71-182 (371)
136 3cdk_A Succinyl-COA:3-ketoacid 56.1 40 0.0014 33.9 9.1 43 593-641 151-197 (241)
137 3cis_A Uncharacterized protein 56.0 83 0.0028 31.3 11.4 59 576-638 100-164 (309)
138 1id1_A Putative potassium chan 55.9 36 0.0012 30.6 7.9 101 526-638 3-109 (153)
139 3qhx_A Cystathionine gamma-syn 55.8 49 0.0017 34.4 10.0 97 527-632 83-186 (392)
140 2aef_A Calcium-gated potassium 55.8 19 0.00065 34.7 6.4 94 525-637 8-108 (234)
141 1d2f_A MALY protein; aminotran 55.7 49 0.0017 33.6 9.8 101 525-632 87-200 (390)
142 2pb2_A Acetylornithine/succiny 55.7 65 0.0022 33.7 10.9 102 526-632 115-240 (420)
143 1fc4_A 2-amino-3-ketobutyrate 55.6 91 0.0031 31.6 11.8 96 527-632 107-212 (401)
144 1o1y_A Conserved hypothetical 55.6 11 0.00036 37.6 4.6 86 550-635 11-101 (239)
145 2dou_A Probable N-succinyldiam 55.6 64 0.0022 32.5 10.6 99 527-632 89-196 (376)
146 1qgn_A Protein (cystathionine 55.5 73 0.0025 34.4 11.6 97 527-632 131-235 (445)
147 3fxa_A SIS domain protein; str 55.5 70 0.0024 30.1 10.2 36 566-601 109-144 (201)
148 2ahu_A Putative enzyme YDIF; C 55.3 1.1E+02 0.0039 34.2 13.4 44 593-636 180-228 (531)
149 3kgw_A Alanine-glyoxylate amin 54.9 60 0.0021 32.5 10.2 97 528-632 77-183 (393)
150 1bw0_A TAT, protein (tyrosine 54.8 53 0.0018 33.7 9.9 101 525-632 104-215 (416)
151 3ftb_A Histidinol-phosphate am 54.8 41 0.0014 33.5 8.9 97 525-632 78-182 (361)
152 3zrp_A Serine-pyruvate aminotr 54.0 54 0.0018 32.7 9.6 97 527-632 56-162 (384)
153 2fr1_A Erythromycin synthase, 53.9 58 0.002 35.7 10.6 112 523-636 223-361 (486)
154 2bkw_A Alanine-glyoxylate amin 53.8 78 0.0027 31.6 10.8 99 526-632 60-174 (385)
155 4e4t_A Phosphoribosylaminoimid 53.4 13 0.00043 40.0 5.1 77 522-604 31-107 (419)
156 1mjh_A Protein (ATP-binding do 53.2 30 0.001 30.8 6.8 38 593-634 120-158 (162)
157 1nri_A Hypothetical protein HI 53.2 1.5E+02 0.0053 30.3 13.1 52 566-619 157-211 (306)
158 1u08_A Hypothetical aminotrans 53.1 97 0.0033 31.3 11.5 99 527-632 93-201 (386)
159 2nvv_A Acetyl-COA hydrolase/tr 52.7 31 0.0011 38.6 8.2 95 518-613 10-139 (506)
160 1jmv_A USPA, universal stress 52.5 77 0.0026 27.3 9.3 57 572-634 73-137 (141)
161 3cis_A Uncharacterized protein 52.4 1.3E+02 0.0044 29.9 12.0 57 575-635 244-306 (309)
162 1ajs_A Aspartate aminotransfer 52.3 91 0.0031 31.9 11.2 105 524-632 96-221 (412)
163 3ly1_A Putative histidinol-pho 52.3 39 0.0013 33.7 8.2 98 525-632 68-178 (354)
164 2dum_A Hypothetical protein PH 52.2 31 0.0011 31.0 6.9 39 593-635 117-156 (170)
165 1yiz_A Kynurenine aminotransfe 52.0 82 0.0028 32.5 10.9 102 524-632 99-220 (429)
166 2g39_A Acetyl-COA hydrolase; c 51.9 37 0.0013 37.9 8.7 95 518-613 20-144 (497)
167 1tq8_A Hypothetical protein RV 51.9 97 0.0033 28.1 10.2 62 569-634 87-157 (163)
168 3ke3_A Putative serine-pyruvat 51.7 1.8E+02 0.0063 29.6 13.4 100 527-633 53-174 (379)
169 3q2o_A Phosphoribosylaminoimid 51.7 4 0.00014 42.8 0.9 76 522-603 10-85 (389)
170 4gqb_A Protein arginine N-meth 51.3 19 0.00065 41.5 6.4 69 527-598 359-433 (637)
171 2okj_A Glutamate decarboxylase 51.3 96 0.0033 33.3 11.6 103 525-632 151-280 (504)
172 2ord_A Acoat, acetylornithine 50.8 61 0.0021 33.0 9.6 102 526-632 98-222 (397)
173 3e48_A Putative nucleoside-dip 50.8 20 0.0007 35.1 5.8 103 528-637 2-107 (289)
174 1byr_A Protein (endonuclease); 50.7 46 0.0016 29.7 7.7 55 529-583 32-88 (155)
175 3h5i_A Response regulator/sens 50.6 66 0.0022 27.5 8.5 81 551-638 5-89 (140)
176 2ay1_A Aroat, aromatic amino a 50.5 74 0.0025 32.2 10.1 102 525-632 89-207 (394)
177 2ctz_A O-acetyl-L-homoserine s 50.5 63 0.0022 33.9 9.9 98 527-632 75-179 (421)
178 1wv2_A Thiazole moeity, thiazo 50.3 57 0.0019 33.9 9.1 115 519-637 65-197 (265)
179 2jl1_A Triphenylmethane reduct 49.6 41 0.0014 32.6 7.7 102 528-636 2-107 (287)
180 3acz_A Methionine gamma-lyase; 49.6 65 0.0022 33.3 9.7 98 527-632 76-179 (389)
181 4f4e_A Aromatic-amino-acid ami 49.4 82 0.0028 32.6 10.4 100 527-632 119-233 (420)
182 2zcu_A Uncharacterized oxidore 49.4 47 0.0016 32.1 8.1 100 528-636 1-104 (286)
183 1gd9_A Aspartate aminotransfer 49.3 77 0.0026 32.0 10.0 102 524-632 85-198 (389)
184 1n8p_A Cystathionine gamma-lya 49.2 51 0.0017 34.4 8.8 97 527-632 72-177 (393)
185 3nnk_A Ureidoglycine-glyoxylat 48.4 1E+02 0.0035 31.2 10.7 96 529-632 68-173 (411)
186 3hdj_A Probable ornithine cycl 48.3 64 0.0022 33.5 9.3 93 519-617 112-215 (313)
187 3nra_A Aspartate aminotransfer 48.0 52 0.0018 33.4 8.5 100 526-632 103-217 (407)
188 3ua3_A Protein arginine N-meth 47.9 32 0.0011 40.5 7.5 84 513-598 394-500 (745)
189 1e5e_A MGL, methionine gamma-l 47.8 1.4E+02 0.0047 31.1 11.9 98 527-632 79-183 (404)
190 1ek6_A UDP-galactose 4-epimera 47.7 85 0.0029 31.3 9.9 108 527-636 3-132 (348)
191 2rfv_A Methionine gamma-lyase; 47.6 1E+02 0.0035 31.7 10.7 98 527-632 81-184 (398)
192 3e2y_A Kynurenine-oxoglutarate 47.6 77 0.0026 32.2 9.7 100 526-632 86-205 (410)
193 3gk7_A 4-hydroxybutyrate COA-t 47.5 37 0.0013 37.5 7.7 94 519-613 17-135 (448)
194 3if2_A Aminotransferase; YP_26 47.0 17 0.00057 37.9 4.7 107 524-632 105-244 (444)
195 2o0r_A RV0858C (N-succinyldiam 46.8 1.4E+02 0.0047 30.6 11.6 99 527-632 88-198 (411)
196 3asa_A LL-diaminopimelate amin 46.7 47 0.0016 34.1 8.0 100 525-632 95-201 (400)
197 2r2n_A Kynurenine/alpha-aminoa 46.6 1.1E+02 0.0037 31.8 10.9 100 527-632 110-229 (425)
198 3ip3_A Oxidoreductase, putativ 46.5 31 0.0011 35.3 6.6 113 528-643 4-135 (337)
199 1xr4_A Putative citrate lyase 46.5 43 0.0015 37.5 8.1 147 512-704 250-449 (509)
200 3dhn_A NAD-dependent epimerase 46.4 56 0.0019 30.5 7.9 100 527-636 5-112 (227)
201 1v4v_A UDP-N-acetylglucosamine 46.3 1.2E+02 0.0041 30.5 10.8 68 549-633 228-299 (376)
202 1qg8_A Protein (spore coat pol 46.2 48 0.0016 31.5 7.5 80 528-608 6-104 (255)
203 3cwc_A Putative glycerate kina 45.7 17 0.00057 39.7 4.5 51 586-638 280-330 (383)
204 3ec7_A Putative dehydrogenase; 45.6 1.4E+02 0.0047 30.9 11.4 112 528-643 25-154 (357)
205 4ds3_A Phosphoribosylglycinami 45.6 38 0.0013 33.6 6.8 70 528-601 11-94 (209)
206 1lnq_A MTHK channels, potassiu 45.4 33 0.0011 35.1 6.5 90 526-634 115-209 (336)
207 7aat_A Aspartate aminotransfer 45.2 1.2E+02 0.004 30.9 10.6 101 525-632 94-213 (401)
208 2h1q_A Hypothetical protein; Z 45.2 34 0.0012 35.4 6.6 89 524-642 139-227 (270)
209 1sb8_A WBPP; epimerase, 4-epim 45.2 89 0.003 31.5 9.7 110 525-636 26-153 (352)
210 3fsl_A Aromatic-amino-acid ami 45.1 1.6E+02 0.0056 29.6 11.7 100 527-632 97-211 (397)
211 2fq6_A Cystathionine beta-lyas 45.1 58 0.002 34.7 8.6 73 553-632 123-204 (415)
212 1iz0_A Quinone oxidoreductase; 45.1 85 0.0029 31.3 9.4 53 523-582 123-176 (302)
213 3mz0_A Inositol 2-dehydrogenas 44.6 1.3E+02 0.0043 30.8 10.8 111 528-643 4-133 (344)
214 2ri0_A Glucosamine-6-phosphate 44.5 65 0.0022 31.4 8.3 89 520-612 22-134 (234)
215 3ele_A Amino transferase; RER0 44.5 1.1E+02 0.0038 31.0 10.3 103 524-632 98-216 (398)
216 2xbl_A Phosphoheptose isomeras 44.3 1.9E+02 0.0067 26.6 12.5 34 566-599 133-166 (198)
217 3oy2_A Glycosyltransferase B73 44.2 31 0.0011 35.2 6.1 98 526-633 184-303 (413)
218 3b46_A Aminotransferase BNA3; 44.2 58 0.002 34.3 8.4 100 526-632 119-239 (447)
219 1v2d_A Glutamine aminotransfer 44.1 89 0.003 31.6 9.5 100 526-632 79-190 (381)
220 3etn_A Putative phosphosugar i 44.0 70 0.0024 31.1 8.3 35 566-600 123-159 (220)
221 3a2b_A Serine palmitoyltransfe 43.9 1.3E+02 0.0046 30.4 10.8 96 527-632 105-208 (398)
222 2dgk_A GAD-beta, GADB, glutama 43.9 2.1E+02 0.0073 29.9 12.7 97 528-632 106-228 (452)
223 3two_A Mannitol dehydrogenase; 43.8 38 0.0013 34.7 6.8 53 522-581 173-225 (348)
224 2zyj_A Alpha-aminodipate amino 43.6 64 0.0022 32.9 8.4 102 525-632 91-201 (397)
225 3uwc_A Nucleotide-sugar aminot 43.5 55 0.0019 32.8 7.8 91 526-632 54-157 (374)
226 3dyd_A Tyrosine aminotransfera 43.4 68 0.0023 33.5 8.7 102 524-632 117-229 (427)
227 4id9_A Short-chain dehydrogena 43.4 54 0.0018 32.8 7.7 99 525-636 18-126 (347)
228 1bs0_A Protein (8-amino-7-oxon 43.3 2.5E+02 0.0085 28.2 12.7 97 527-632 101-203 (384)
229 3kcn_A Adenylate cyclase homol 43.3 16 0.00055 31.9 3.3 57 524-584 25-84 (151)
230 1xi9_A Putative transaminase; 43.1 1.1E+02 0.0037 31.4 10.1 100 526-632 102-212 (406)
231 1xq6_A Unknown protein; struct 43.0 66 0.0023 30.2 7.8 106 525-636 3-133 (253)
232 3g7q_A Valine-pyruvate aminotr 42.9 41 0.0014 34.4 6.8 107 523-632 96-218 (417)
233 3cvj_A Putative phosphoheptose 42.8 1.7E+02 0.006 28.3 11.1 35 565-599 124-169 (243)
234 2o1b_A Aminotransferase, class 42.8 97 0.0033 31.9 9.7 100 526-632 110-219 (404)
235 2xhz_A KDSD, YRBH, arabinose 5 42.6 2E+02 0.0068 26.3 11.1 37 565-601 112-148 (183)
236 3la8_A SMU.1229, putative puri 42.6 45 0.0016 35.1 7.1 74 531-636 189-265 (303)
237 1b5p_A Protein (aspartate amin 42.6 1.1E+02 0.0036 31.2 9.8 100 526-632 92-202 (385)
238 2z5l_A Tylkr1, tylactone synth 42.5 84 0.0029 34.8 9.7 112 523-636 256-391 (511)
239 3rq1_A Aminotransferase class 42.4 1.2E+02 0.0041 31.1 10.3 100 527-632 104-224 (418)
240 1o4s_A Aspartate aminotransfer 42.2 99 0.0034 31.5 9.6 101 525-632 101-212 (389)
241 3fro_A GLGA glycogen synthase; 41.8 1.4E+02 0.0049 30.0 10.6 100 523-633 248-360 (439)
242 1fg7_A Histidinol phosphate am 41.4 72 0.0025 32.3 8.3 100 526-632 76-183 (356)
243 3ia7_A CALG4; glycosysltransfe 41.4 58 0.002 32.9 7.6 22 618-639 115-136 (402)
244 2wsi_A FAD synthetase; transfe 41.4 1.4E+02 0.0049 30.8 10.6 78 526-603 54-167 (306)
245 2pln_A HP1043, response regula 41.2 1.1E+02 0.0039 25.7 8.4 77 549-637 16-96 (137)
246 2xci_A KDO-transferase, 3-deox 41.1 89 0.003 32.4 9.1 75 549-633 223-308 (374)
247 3m2p_A UDP-N-acetylglucosamine 41.0 49 0.0017 32.7 6.9 98 527-634 3-107 (311)
248 3ndn_A O-succinylhomoserine su 40.9 87 0.003 33.2 9.2 97 527-632 98-201 (414)
249 3rsc_A CALG2; TDP, enediyne, s 40.9 58 0.002 33.4 7.6 22 618-639 131-152 (415)
250 1pjq_A CYSG, siroheme synthase 40.6 61 0.0021 35.3 8.0 96 525-637 11-107 (457)
251 3rui_A Ubiquitin-like modifier 40.5 2.4E+02 0.0081 30.0 12.3 103 526-640 34-175 (340)
252 3a9z_A Selenocysteine lyase; P 40.5 3.2E+02 0.011 28.0 13.3 20 526-545 79-98 (432)
253 1qkk_A DCTD, C4-dicarboxylate 40.3 82 0.0028 27.3 7.5 81 550-638 2-86 (155)
254 3ri6_A O-acetylhomoserine sulf 40.2 1.5E+02 0.0051 31.7 10.9 97 528-632 100-202 (430)
255 3mc6_A Sphingosine-1-phosphate 40.1 1E+02 0.0034 32.8 9.5 101 525-632 126-241 (497)
256 3ffh_A Histidinol-phosphate am 40.1 61 0.0021 32.4 7.5 98 525-632 84-192 (363)
257 3aow_A Putative uncharacterize 40.0 1.1E+02 0.0039 32.2 9.9 102 525-632 140-255 (448)
258 3gpi_A NAD-dependent epimerase 40.0 23 0.00078 34.7 4.2 98 527-636 4-109 (286)
259 3npg_A Uncharacterized DUF364 39.9 58 0.002 33.1 7.3 93 524-644 114-207 (249)
260 3ez1_A Aminotransferase MOCR f 39.8 72 0.0025 32.8 8.1 106 523-632 85-212 (423)
261 2lpm_A Two-component response 39.8 33 0.0011 30.9 4.9 78 549-635 6-87 (123)
262 2r5f_A Transcriptional regulat 39.6 72 0.0025 32.2 7.9 99 516-616 48-174 (264)
263 3eag_A UDP-N-acetylmuramate:L- 39.6 1E+02 0.0035 31.7 9.2 89 527-632 5-95 (326)
264 1iug_A Putative aspartate amin 39.5 1.1E+02 0.0037 30.1 9.1 99 526-632 52-158 (352)
265 3tqr_A Phosphoribosylglycinami 39.0 65 0.0022 32.1 7.3 69 529-601 10-91 (215)
266 3eod_A Protein HNR; response r 39.0 1.1E+02 0.0038 25.5 7.9 81 550-638 6-90 (130)
267 3nhm_A Response regulator; pro 38.6 1.4E+02 0.0046 24.9 8.4 55 525-584 26-85 (133)
268 3oks_A 4-aminobutyrate transam 38.5 1.3E+02 0.0044 31.8 10.1 103 527-632 124-266 (451)
269 3ot5_A UDP-N-acetylglucosamine 38.2 2E+02 0.007 30.2 11.5 69 548-633 254-326 (403)
270 3beo_A UDP-N-acetylglucosamine 38.2 1.3E+02 0.0044 30.0 9.5 69 549-633 236-307 (375)
271 1pff_A Methionine gamma-lyase; 38.2 1.6E+02 0.0054 29.0 10.0 98 527-632 15-119 (331)
272 3cog_A Cystathionine gamma-lya 38.1 90 0.0031 32.7 8.7 97 527-632 84-187 (403)
273 3tsa_A SPNG, NDP-rhamnosyltran 38.1 75 0.0026 32.2 7.8 21 617-637 125-145 (391)
274 1tt5_A APPBP1, amyloid protein 38.0 1.7E+02 0.0058 32.8 11.3 108 515-633 22-155 (531)
275 3slg_A PBGP3 protein; structur 37.9 21 0.00073 36.3 3.7 105 526-636 24-142 (372)
276 2j48_A Two-component sensor ki 37.8 92 0.0031 24.8 6.9 78 553-638 3-86 (119)
277 2i2w_A Phosphoheptose isomeras 37.7 2.7E+02 0.0093 26.4 13.1 34 566-599 148-181 (212)
278 3rht_A (gatase1)-like protein; 37.7 20 0.00069 36.7 3.5 81 553-640 6-92 (259)
279 2oas_A ATOA, 4-hydroxybutyrate 37.5 1.6E+02 0.0056 32.1 10.8 21 683-703 373-393 (436)
280 3tcm_A Alanine aminotransferas 37.5 1.3E+02 0.0044 32.5 10.0 102 524-632 156-275 (500)
281 3mt0_A Uncharacterized protein 37.4 1.7E+02 0.006 28.6 10.2 63 569-635 205-276 (290)
282 1jkx_A GART;, phosphoribosylgl 37.4 91 0.0031 30.8 8.0 71 528-602 4-88 (212)
283 1tk9_A Phosphoheptose isomeras 37.2 2.4E+02 0.0083 25.7 11.8 34 566-599 127-160 (188)
284 3d3u_A 4-hydroxybutyrate COA-t 37.1 49 0.0017 36.1 6.6 117 517-636 15-158 (439)
285 2z1d_A Hydrogenase expression/ 37.1 41 0.0014 36.5 5.8 48 583-634 180-227 (372)
286 4dqv_A Probable peptide synthe 36.9 50 0.0017 35.6 6.6 111 525-635 72-214 (478)
287 3osu_A 3-oxoacyl-[acyl-carrier 36.9 84 0.0029 30.3 7.7 106 525-633 3-138 (246)
288 2ydy_A Methionine adenosyltran 36.8 78 0.0027 31.2 7.5 100 526-637 2-112 (315)
289 3h2s_A Putative NADH-flavin re 36.8 72 0.0025 29.6 6.9 100 528-635 2-105 (224)
290 4dik_A Flavoprotein; TM0755, e 36.8 2.5E+02 0.0084 30.2 12.0 141 494-639 200-363 (410)
291 3nmy_A Xometc, cystathionine g 36.7 1.2E+02 0.004 32.0 9.3 96 527-632 84-187 (400)
292 1f0k_A MURG, UDP-N-acetylgluco 36.7 1.6E+02 0.0054 29.2 9.8 90 527-633 184-280 (364)
293 1e3j_A NADP(H)-dependent ketos 36.6 99 0.0034 31.6 8.5 54 522-582 165-218 (352)
294 2rjn_A Response regulator rece 36.6 1E+02 0.0035 26.7 7.5 81 550-638 6-90 (154)
295 3frk_A QDTB; aminotransferase, 36.6 51 0.0017 33.3 6.3 94 527-632 53-156 (373)
296 3eh7_A 4-hydroxybutyrate COA-t 36.5 2.3E+02 0.0079 31.0 11.8 21 684-704 383-403 (434)
297 1smk_A Malate dehydrogenase, g 36.5 1E+02 0.0034 32.0 8.6 99 527-628 9-117 (326)
298 2jis_A Cysteine sulfinic acid 36.4 2.7E+02 0.0094 29.9 12.4 100 525-632 165-294 (515)
299 2bwn_A 5-aminolevulinate synth 36.3 3.5E+02 0.012 27.3 14.8 72 553-632 134-213 (401)
300 1gy8_A UDP-galactose 4-epimera 36.3 1E+02 0.0035 31.4 8.6 109 526-636 2-144 (397)
301 2zay_A Response regulator rece 36.3 90 0.0031 26.6 7.0 82 549-638 6-93 (147)
302 2fnu_A Aminotransferase; prote 36.2 88 0.003 31.2 7.9 94 527-632 49-153 (375)
303 4dad_A Putative pilus assembly 36.2 36 0.0012 29.3 4.4 81 549-637 18-105 (146)
304 1eq2_A ADP-L-glycero-D-mannohe 36.2 95 0.0033 30.2 8.0 104 528-635 1-116 (310)
305 2qbu_A Precorrin-2 methyltrans 36.1 73 0.0025 30.8 7.1 50 542-592 87-139 (232)
306 3orq_A N5-carboxyaminoimidazol 36.1 23 0.0008 37.1 3.8 71 523-603 9-83 (377)
307 4gsl_A Ubiquitin-like modifier 36.1 2E+02 0.0068 33.2 11.5 104 520-634 321-463 (615)
308 3nzo_A UDP-N-acetylglucosamine 36.1 76 0.0026 33.4 7.7 111 525-637 34-166 (399)
309 3vh1_A Ubiquitin-like modifier 36.0 2.1E+02 0.0071 32.9 11.7 99 526-634 327-464 (598)
310 1orr_A CDP-tyvelose-2-epimeras 35.9 32 0.0011 34.3 4.6 102 528-634 3-124 (347)
311 3h4t_A Glycosyltransferase GTF 35.9 47 0.0016 34.6 6.0 97 529-636 5-125 (404)
312 4adb_A Succinylornithine trans 35.6 3E+02 0.01 27.7 11.9 102 526-632 97-222 (406)
313 1cs1_A CGS, protein (cystathio 35.5 3.1E+02 0.011 27.8 12.1 97 527-632 69-172 (386)
314 1fmc_A 7 alpha-hydroxysteroid 35.4 2.4E+02 0.0083 26.6 10.6 107 525-635 10-145 (255)
315 1piw_A Hypothetical zinc-type 35.4 81 0.0028 32.5 7.7 54 522-582 176-229 (360)
316 3tqh_A Quinone oxidoreductase; 35.4 60 0.0021 32.8 6.6 69 522-598 149-220 (321)
317 2egx_A Putative acetylglutamat 35.3 3E+02 0.01 27.5 11.7 105 527-632 30-188 (269)
318 3jyo_A Quinate/shikimate dehyd 35.3 1.4E+02 0.0049 30.4 9.4 72 525-598 126-199 (283)
319 3f0h_A Aminotransferase; RER07 35.3 2.1E+02 0.0073 28.4 10.6 98 527-632 72-179 (376)
320 4hvk_A Probable cysteine desul 35.0 3.4E+02 0.011 26.7 15.1 98 527-632 62-172 (382)
321 3eh7_A 4-hydroxybutyrate COA-t 35.0 73 0.0025 34.9 7.5 112 518-632 20-157 (434)
322 1gc0_A Methionine gamma-lyase; 35.0 1.5E+02 0.0053 30.4 9.8 97 527-632 82-185 (398)
323 1pl8_A Human sorbitol dehydrog 34.9 1.1E+02 0.0038 31.4 8.6 56 522-583 168-223 (356)
324 2vsy_A XCC0866; transferase, g 34.9 2.5E+02 0.0086 30.0 11.7 99 525-636 375-485 (568)
325 4gek_A TRNA (CMO5U34)-methyltr 34.9 1.5E+02 0.0051 29.5 9.3 85 511-598 56-144 (261)
326 2a9v_A GMP synthase; structura 34.9 42 0.0014 32.6 5.1 81 551-635 13-93 (212)
327 1mio_B Nitrogenase molybdenum 34.8 4.1E+02 0.014 28.8 13.4 94 525-634 311-410 (458)
328 2ggs_A 273AA long hypothetical 34.8 40 0.0014 32.4 5.0 97 528-636 2-108 (273)
329 3kcq_A Phosphoribosylglycinami 34.8 61 0.0021 32.3 6.3 71 528-602 12-91 (215)
330 4hv4_A UDP-N-acetylmuramate--L 34.8 88 0.003 34.3 8.2 89 525-632 21-110 (494)
331 3i16_A Aluminum resistance pro 34.7 1E+02 0.0035 33.2 8.6 95 531-632 97-217 (427)
332 1b93_A Protein (methylglyoxal 34.5 78 0.0027 30.2 6.7 77 551-638 39-124 (152)
333 3hvy_A Cystathionine beta-lyas 34.5 89 0.003 33.7 8.0 95 531-632 98-217 (427)
334 2x6t_A ADP-L-glycero-D-manno-h 34.2 87 0.003 31.6 7.5 106 526-635 46-163 (357)
335 1hdo_A Biliverdin IX beta redu 34.2 1E+02 0.0034 28.0 7.3 104 527-637 4-112 (206)
336 1vl0_A DTDP-4-dehydrorhamnose 34.2 63 0.0022 31.5 6.3 91 527-636 13-114 (292)
337 1v72_A Aldolase; PLP-dependent 34.1 64 0.0022 31.9 6.4 100 527-632 61-178 (356)
338 3hzh_A Chemotaxis response reg 34.1 1E+02 0.0035 27.0 7.2 81 549-637 34-121 (157)
339 3st7_A Capsular polysaccharide 34.1 70 0.0024 32.6 6.9 18 612-629 69-86 (369)
340 2o0m_A Transcriptional regulat 34.0 61 0.0021 33.8 6.5 92 512-604 124-246 (345)
341 3ilh_A Two component response 33.9 1.5E+02 0.0051 24.9 8.0 83 548-638 6-103 (146)
342 1e6u_A GDP-fucose synthetase; 33.8 87 0.003 30.9 7.3 92 527-636 4-107 (321)
343 2ejb_A Probable aromatic acid 33.8 91 0.0031 30.3 7.3 20 540-559 19-38 (189)
344 1ex2_A Protein MAF; structural 33.7 1E+02 0.0036 30.1 7.7 91 531-632 6-103 (189)
345 3k5i_A Phosphoribosyl-aminoimi 33.6 30 0.001 36.7 4.1 79 521-604 19-97 (403)
346 3enk_A UDP-glucose 4-epimerase 33.3 1.4E+02 0.0046 29.7 8.7 109 525-636 4-129 (341)
347 4eu9_A Succinyl-COA:acetate co 33.1 1.2E+02 0.0041 33.7 9.0 96 517-612 18-147 (514)
348 3t6k_A Response regulator rece 32.8 1.5E+02 0.005 25.3 7.8 80 551-638 4-89 (136)
349 2hq1_A Glucose/ribitol dehydro 32.7 2E+02 0.0069 27.1 9.5 76 525-602 4-92 (247)
350 3tqx_A 2-amino-3-ketobutyrate 32.6 2E+02 0.007 28.8 10.0 96 527-632 105-210 (399)
351 1p0f_A NADP-dependent alcohol 32.5 1.5E+02 0.005 30.6 9.1 54 522-581 188-241 (373)
352 3ppl_A Aspartate aminotransfer 32.4 1.9E+02 0.0065 29.8 9.9 99 523-632 93-220 (427)
353 2jhf_A Alcohol dehydrogenase E 32.3 1.6E+02 0.0054 30.4 9.3 54 522-581 188-241 (374)
354 3m6m_D Sensory/regulatory prot 32.2 89 0.003 27.0 6.4 80 550-637 13-100 (143)
355 1uuf_A YAHK, zinc-type alcohol 32.2 90 0.0031 32.5 7.5 53 522-581 191-243 (369)
356 1kyq_A Met8P, siroheme biosynt 32.1 30 0.001 35.7 3.7 32 525-556 12-43 (274)
357 1e3i_A Alcohol dehydrogenase, 32.1 1.5E+02 0.0053 30.5 9.2 54 522-581 192-245 (376)
358 4had_A Probable oxidoreductase 32.0 2.1E+02 0.0072 29.0 10.1 68 527-601 24-94 (350)
359 2iss_D Glutamine amidotransfer 32.0 51 0.0017 31.6 5.1 78 549-638 18-102 (208)
360 3jzl_A Putative cystathionine 31.9 1.5E+02 0.005 31.6 9.2 94 532-632 84-200 (409)
361 1meo_A Phosophoribosylglycinam 31.8 1E+02 0.0036 30.3 7.4 70 528-601 4-87 (209)
362 3t18_A Aminotransferase class 31.8 1.9E+02 0.0064 29.5 9.7 100 527-632 103-223 (413)
363 4eye_A Probable oxidoreductase 31.8 1.5E+02 0.0051 30.3 8.9 54 522-582 156-210 (342)
364 3ps9_A TRNA 5-methylaminomethy 31.7 83 0.0028 35.4 7.6 63 520-584 206-303 (676)
365 1o97_C Electron transferring f 31.7 1.4E+02 0.0048 30.4 8.6 87 528-639 60-151 (264)
366 3uog_A Alcohol dehydrogenase; 31.4 1E+02 0.0036 31.8 7.7 54 522-582 186-239 (363)
367 4fzr_A SSFS6; structural genom 31.3 86 0.0029 32.0 7.0 19 619-637 136-154 (398)
368 4e3z_A Putative oxidoreductase 31.1 2.6E+02 0.0089 27.2 10.2 100 524-625 24-149 (272)
369 3nhm_A Response regulator; pro 31.0 1.2E+02 0.0041 25.3 6.8 78 551-637 4-87 (133)
370 3otg_A CALG1; calicheamicin, T 31.0 1.2E+02 0.0043 30.7 8.1 19 619-637 143-161 (412)
371 1g0o_A Trihydroxynaphthalene r 30.8 1.3E+02 0.0046 29.5 8.1 99 525-626 28-152 (283)
372 1qdl_B Protein (anthranilate s 30.7 1.5E+02 0.0051 28.0 8.1 75 554-635 4-85 (195)
373 3heb_A Response regulator rece 30.6 1.5E+02 0.0053 25.4 7.7 80 549-637 2-99 (152)
374 3sho_A Transcriptional regulat 30.5 3.1E+02 0.011 25.0 10.3 89 518-637 31-124 (187)
375 3d4o_A Dipicolinate synthase s 30.5 1.6E+02 0.0056 29.6 8.8 68 525-601 154-221 (293)
376 2p5x_A ASMTL, N-acetylserotoni 30.5 1.3E+02 0.0045 30.3 8.0 92 531-632 7-112 (230)
377 1y1p_A ARII, aldehyde reductas 30.4 1.6E+02 0.0056 28.9 8.7 110 524-636 9-132 (342)
378 3d6k_A Putative aminotransfera 30.4 2.1E+02 0.0071 29.6 9.9 106 523-632 91-218 (422)
379 1gpj_A Glutamyl-tRNA reductase 30.4 3.1E+02 0.011 29.1 11.4 70 525-601 166-235 (404)
380 1i1q_B Anthranilate synthase c 30.3 1.1E+02 0.0037 28.9 7.0 75 553-634 2-83 (192)
381 4gud_A Imidazole glycerol phos 30.1 27 0.00094 33.3 2.8 71 553-635 4-80 (211)
382 2qr3_A Two-component system re 30.1 1.3E+02 0.0043 25.3 6.8 84 551-637 3-90 (140)
383 2gek_A Phosphatidylinositol ma 30.0 68 0.0023 32.3 5.9 94 527-633 209-313 (406)
384 3op7_A Aminotransferase class 29.9 1.4E+02 0.0049 29.8 8.3 100 526-632 82-192 (375)
385 1vgv_A UDP-N-acetylglucosamine 29.9 1.2E+02 0.0041 30.3 7.7 71 548-634 235-308 (384)
386 1oc2_A DTDP-glucose 4,6-dehydr 29.9 39 0.0013 33.8 4.1 109 527-635 5-125 (348)
387 3l4e_A Uncharacterized peptida 29.8 69 0.0023 31.4 5.7 110 528-637 4-124 (206)
388 1ja9_A 4HNR, 1,3,6,8-tetrahydr 29.7 1.2E+02 0.0043 29.0 7.5 99 525-626 20-144 (274)
389 3r5x_A D-alanine--D-alanine li 29.6 45 0.0015 33.2 4.5 41 565-605 24-67 (307)
390 3hn7_A UDP-N-acetylmuramate-L- 29.6 1.3E+02 0.0043 33.3 8.4 94 525-635 18-112 (524)
391 3fbg_A Putative arginate lyase 29.6 1E+02 0.0034 31.6 7.2 52 525-583 150-202 (346)
392 2gb3_A Aspartate aminotransfer 29.5 1E+02 0.0035 31.7 7.3 100 526-632 103-212 (409)
393 2f9f_A First mannosyl transfer 29.4 1.4E+02 0.0048 26.9 7.4 97 525-633 22-127 (177)
394 3gt7_A Sensor protein; structu 29.4 1.5E+02 0.0052 25.8 7.4 81 550-638 6-92 (154)
395 1i4n_A Indole-3-glycerol phosp 29.4 33 0.0011 35.1 3.4 139 554-711 77-223 (251)
396 4dzr_A Protein-(glutamine-N5) 29.3 74 0.0025 29.0 5.6 73 524-599 29-107 (215)
397 3ip1_A Alcohol dehydrogenase, 29.2 1.6E+02 0.0055 30.8 8.9 54 522-581 210-263 (404)
398 1cdo_A Alcohol dehydrogenase; 29.1 1.9E+02 0.0066 29.7 9.3 54 522-581 189-242 (374)
399 1cbf_A Cobalt-precorrin-4 tran 29.1 97 0.0033 31.4 6.9 52 540-592 84-138 (285)
400 3vps_A TUNA, NAD-dependent epi 29.0 58 0.002 31.9 5.0 26 612-637 95-120 (321)
401 2cf5_A Atccad5, CAD, cinnamyl 29.0 1.3E+02 0.0046 30.9 8.0 55 523-583 177-232 (357)
402 3f6p_A Transcriptional regulat 28.9 1.5E+02 0.0052 24.5 7.1 77 553-637 4-83 (120)
403 1gs5_A Acetylglutamate kinase; 28.9 3.3E+02 0.011 26.9 10.6 106 528-635 38-181 (258)
404 3ew7_A LMO0794 protein; Q8Y8U8 28.8 1.7E+02 0.0058 26.8 8.0 98 528-635 2-102 (221)
405 2r25_B Osmosensing histidine p 28.8 21 0.00071 30.6 1.6 57 528-584 29-89 (133)
406 1k68_A Phytochrome response re 28.8 1.4E+02 0.0049 24.7 6.9 78 552-637 3-95 (140)
407 3i4j_A Aminotransferase, class 28.8 1.3E+02 0.0045 31.1 8.0 22 526-547 90-111 (430)
408 3hdv_A Response regulator; PSI 28.7 55 0.0019 27.6 4.3 35 549-583 50-88 (136)
409 1qo0_D AMIR; binding protein, 28.6 43 0.0015 30.7 3.8 79 550-638 11-90 (196)
410 2rir_A Dipicolinate synthase, 28.6 2E+02 0.0067 29.0 9.1 69 525-602 156-224 (300)
411 3goh_A Alcohol dehydrogenase, 28.5 67 0.0023 32.3 5.5 52 522-581 139-190 (315)
412 3h5n_A MCCB protein; ubiquitin 28.5 2E+02 0.007 30.2 9.5 104 520-634 113-241 (353)
413 1ka9_H Imidazole glycerol phos 28.5 68 0.0023 30.4 5.3 76 552-638 3-86 (200)
414 2x4g_A Nucleoside-diphosphate- 28.4 1.1E+02 0.0038 30.3 7.0 103 527-636 14-126 (342)
415 3grc_A Sensor protein, kinase; 28.3 2E+02 0.0068 24.2 7.8 81 550-638 5-91 (140)
416 3ab8_A Putative uncharacterize 28.3 1.5E+02 0.005 28.6 7.7 64 572-638 83-152 (268)
417 3i42_A Response regulator rece 28.3 1.6E+02 0.0055 24.3 7.1 80 551-638 3-88 (127)
418 3cq5_A Histidinol-phosphate am 28.2 2.5E+02 0.0087 28.1 9.8 97 526-632 93-199 (369)
419 4ej6_A Putative zinc-binding d 28.2 1.1E+02 0.0037 31.8 7.2 55 522-582 179-233 (370)
420 3fxa_A SIS domain protein; str 28.2 2E+02 0.0067 26.9 8.5 63 567-636 62-128 (201)
421 3kht_A Response regulator; PSI 28.1 1.3E+02 0.0045 25.5 6.7 81 550-638 4-92 (144)
422 3ffr_A Phosphoserine aminotran 28.1 1.7E+02 0.0059 28.7 8.4 95 527-632 63-166 (362)
423 3rft_A Uronate dehydrogenase; 28.1 79 0.0027 30.8 5.8 99 526-636 3-111 (267)
424 3o8q_A Shikimate 5-dehydrogena 28.0 2.5E+02 0.0085 28.6 9.7 68 525-598 125-192 (281)
425 3da8_A Probable 5'-phosphoribo 28.0 83 0.0028 31.3 6.0 69 529-601 17-97 (215)
426 3rss_A Putative uncharacterize 28.0 4E+02 0.014 29.6 12.1 118 509-632 33-157 (502)
427 3p9x_A Phosphoribosylglycinami 27.7 1.2E+02 0.0041 30.1 7.1 69 528-601 6-89 (211)
428 2fzw_A Alcohol dehydrogenase c 27.7 1.7E+02 0.0057 30.1 8.5 54 522-581 187-240 (373)
429 3grc_A Sensor protein, kinase; 27.6 58 0.002 27.6 4.2 56 550-606 49-109 (140)
430 4ffc_A 4-aminobutyrate aminotr 27.5 2.3E+02 0.0079 29.9 9.8 103 527-632 127-264 (453)
431 3eod_A Protein HNR; response r 27.5 39 0.0013 28.3 3.1 54 526-584 31-87 (130)
432 1tcv_A Purine-nucleoside phosp 27.5 92 0.0032 32.2 6.4 73 532-636 166-243 (287)
433 3h9u_A Adenosylhomocysteinase; 27.5 1.4E+02 0.0049 32.9 8.2 67 522-600 207-273 (436)
434 3jvi_A Protein tyrosine phosph 27.4 76 0.0026 29.8 5.3 67 533-599 16-89 (161)
435 1a9x_B Carbamoyl phosphate syn 27.4 1.1E+02 0.0037 33.1 7.1 75 551-635 190-269 (379)
436 2qsj_A DNA-binding response re 27.4 1.6E+02 0.0055 25.3 7.2 79 551-637 3-88 (154)
437 3euc_A Histidinol-phosphate am 27.3 2.6E+02 0.0087 27.9 9.6 100 526-632 86-197 (367)
438 2a8y_A 5'-methylthioadenosine 27.3 95 0.0033 31.6 6.4 73 533-636 136-212 (270)
439 1g2o_A Purine nucleoside phosp 27.2 92 0.0032 31.9 6.3 71 533-636 159-229 (268)
440 3hh1_A Tetrapyrrole methylase 27.1 1.2E+02 0.0041 26.6 6.3 44 538-583 69-115 (117)
441 3r0j_A Possible two component 27.1 2.2E+02 0.0074 27.2 8.7 78 550-635 22-103 (250)
442 4e16_A Precorrin-4 C(11)-methy 27.0 1E+02 0.0036 30.6 6.6 53 539-592 67-122 (253)
443 3odg_A Xanthosine phosphorylas 27.0 98 0.0034 32.1 6.5 72 532-635 170-244 (287)
444 1vmd_A MGS, methylglyoxal synt 27.0 50 0.0017 32.4 4.1 78 551-639 55-141 (178)
445 3jv7_A ADH-A; dehydrogenase, n 27.0 1.5E+02 0.0053 30.0 8.0 57 522-584 168-224 (345)
446 2ywj_A Glutamine amidotransfer 26.9 1.6E+02 0.0055 27.3 7.6 60 567-636 14-77 (186)
447 3ihj_A Alanine aminotransferas 26.9 2.1E+02 0.0071 30.9 9.4 103 525-632 153-273 (498)
448 3is3_A 17BETA-hydroxysteroid d 26.9 1.6E+02 0.0054 28.9 7.8 99 525-626 17-141 (270)
449 3e9k_A Kynureninase; kynurenin 26.8 1.7E+02 0.0058 30.7 8.5 102 525-632 128-249 (465)
450 3uko_A Alcohol dehydrogenase c 26.8 1.4E+02 0.0048 30.9 7.7 56 522-583 190-245 (378)
451 3ijr_A Oxidoreductase, short c 26.8 4.7E+02 0.016 25.8 11.5 100 525-626 46-171 (291)
452 3dzc_A UDP-N-acetylglucosamine 26.8 1.9E+02 0.0065 30.3 8.8 68 549-633 261-332 (396)
453 1vef_A Acetylornithine/acetyl- 26.7 2.5E+02 0.0087 28.3 9.6 100 526-632 105-224 (395)
454 4da9_A Short-chain dehydrogena 26.7 2.7E+02 0.0092 27.5 9.5 76 525-602 28-116 (280)
455 3sc6_A DTDP-4-dehydrorhamnose 26.6 66 0.0022 31.3 4.9 92 528-637 7-108 (287)
456 3cg4_A Response regulator rece 26.6 1.8E+02 0.0062 24.4 7.2 80 550-637 6-91 (142)
457 3mhs_B Protein SUS1; multi-pro 26.5 1.3E+02 0.0043 26.7 6.2 55 447-506 37-91 (96)
458 1h2b_A Alcohol dehydrogenase; 26.4 1.6E+02 0.0055 30.2 8.1 54 522-582 183-237 (359)
459 3kkj_A Amine oxidase, flavin-c 26.4 42 0.0014 30.0 3.2 28 553-582 4-31 (336)
460 3cg4_A Response regulator rece 26.3 98 0.0034 26.1 5.5 35 550-584 50-89 (142)
461 1edo_A Beta-keto acyl carrier 26.3 1.4E+02 0.005 28.1 7.2 106 526-634 1-136 (244)
462 2nv0_A Glutamine amidotransfer 26.3 70 0.0024 30.1 4.9 75 553-639 3-84 (196)
463 2amh_A Septum formation protei 26.2 3E+02 0.01 27.2 9.6 99 528-633 10-123 (207)
464 3ndc_A Precorrin-4 C(11)-methy 26.2 1.2E+02 0.004 30.6 6.8 53 539-592 66-121 (264)
465 3dr4_A Putative perosamine syn 26.2 1.6E+02 0.0053 29.9 7.8 89 527-632 73-176 (391)
466 3oj0_A Glutr, glutamyl-tRNA re 26.1 96 0.0033 27.5 5.6 68 525-600 20-87 (144)
467 2ez2_A Beta-tyrosinase, tyrosi 26.0 2.8E+02 0.0095 28.8 9.9 99 527-632 92-213 (456)
468 4gel_A Mitochondrial cardiolip 26.0 78 0.0027 30.2 5.3 53 529-582 76-129 (220)
469 3ruy_A Ornithine aminotransfer 26.0 3.5E+02 0.012 27.2 10.5 105 525-632 93-221 (392)
470 1n2s_A DTDP-4-, DTDP-glucose o 26.0 89 0.003 30.4 5.8 94 528-636 2-105 (299)
471 2r85_A PURP protein PF1517; AT 25.9 1.1E+02 0.0037 30.5 6.5 30 528-560 4-33 (334)
472 3klj_A NAD(FAD)-dependent dehy 25.9 1.2E+02 0.004 31.9 7.0 76 526-602 146-228 (385)
473 1qe5_A Pentosyltransferase; en 25.9 98 0.0034 31.6 6.2 72 532-636 157-228 (266)
474 3s2e_A Zinc-containing alcohol 25.9 1.2E+02 0.0042 30.8 7.0 55 522-583 163-217 (340)
475 3trj_A Phosphoheptose isomeras 25.9 66 0.0022 30.9 4.7 30 520-549 109-141 (201)
476 3i42_A Response regulator rece 25.9 48 0.0016 27.6 3.3 53 526-583 27-84 (127)
477 4ffl_A PYLC; amino acid, biosy 25.8 1E+02 0.0035 31.6 6.4 68 527-604 2-74 (363)
478 3qp9_A Type I polyketide synth 25.8 1.6E+02 0.0054 32.6 8.4 112 523-636 248-402 (525)
479 1yqd_A Sinapyl alcohol dehydro 25.8 1.9E+02 0.0066 29.8 8.6 53 523-581 184-237 (366)
480 3jte_A Response regulator rece 25.8 38 0.0013 28.9 2.7 56 526-584 27-85 (143)
481 3k6m_A Succinyl-COA:3-ketoacid 25.7 49 0.0017 36.9 4.2 97 511-612 262-373 (481)
482 3afn_B Carbonyl reductase; alp 25.7 2.7E+02 0.0092 26.3 9.0 76 525-602 6-94 (258)
483 1u2p_A Ptpase, low molecular w 25.5 94 0.0032 29.1 5.6 65 533-599 16-88 (163)
484 2bka_A CC3, TAT-interacting pr 25.5 1.1E+02 0.0037 28.8 6.1 106 525-636 17-132 (242)
485 2gkg_A Response regulator homo 25.4 1.8E+02 0.0061 23.6 6.8 77 552-636 6-88 (127)
486 1pqw_A Polyketide synthase; ro 25.4 2.3E+02 0.0078 26.1 8.2 53 522-581 35-88 (198)
487 3hdo_A Histidinol-phosphate am 25.3 1.5E+02 0.0053 29.6 7.6 98 525-632 82-184 (360)
488 3kto_A Response regulator rece 25.3 1.3E+02 0.0044 25.4 6.1 83 551-639 6-92 (136)
489 2b69_A UDP-glucuronate decarbo 25.3 54 0.0019 32.9 4.2 108 525-636 26-142 (343)
490 4hc4_A Protein arginine N-meth 25.3 1.1E+02 0.0039 32.6 6.9 68 525-598 83-154 (376)
491 3cg0_A Response regulator rece 25.2 1.7E+02 0.0058 24.5 6.8 83 549-638 7-93 (140)
492 2rdm_A Response regulator rece 25.2 2.7E+02 0.0092 22.9 8.0 81 551-638 5-90 (132)
493 3icc_A Putative 3-oxoacyl-(acy 25.2 2.5E+02 0.0086 26.7 8.7 56 525-582 6-62 (255)
494 1tvm_A PTS system, galactitol- 25.1 89 0.003 27.7 5.1 52 552-603 22-79 (113)
495 3tha_A Tryptophan synthase alp 25.1 86 0.0029 32.1 5.6 57 528-586 92-152 (252)
496 4e38_A Keto-hydroxyglutarate-a 25.1 1.1E+02 0.0037 30.9 6.3 44 562-605 45-94 (232)
497 3lkv_A Uncharacterized conserv 25.1 41 0.0014 33.9 3.2 41 589-636 189-229 (302)
498 1efp_B ETF, protein (electron 25.1 1.9E+02 0.0064 29.3 8.1 89 528-638 59-151 (252)
499 3fro_A GLGA glycogen synthase; 25.1 94 0.0032 31.4 5.9 21 617-637 135-155 (439)
500 2ozl_B PDHE1-B, pyruvate dehyd 25.1 2.2E+02 0.0074 29.8 8.8 36 605-640 274-314 (341)
No 1
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=100.00 E-value=6.9e-70 Score=578.16 Aligned_cols=304 Identities=26% Similarity=0.364 Sum_probs=282.9
Q ss_pred HHHHHHHHHHhcCcccChHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHhcCchhhhHHHHHHHHHHHH
Q psy17541 401 PAIYRLGVQYATGVVRGSNARCVALLSAIKQMVCDYTTPSEKEYSRGFEERLGPAMSYLNKCRPHSVSMLNAVKHFKSHL 480 (717)
Q Consensus 401 PAVlrLGlq~a~~~I~GSnaraiAaL~ALkqVI~Dy~tp~~~~lsr~L~~~Lk~ai~~L~~aRPtsVSmgNAIR~Lk~~I 480 (717)
..+..++..|++++|+||++++++++.+|..++..+.+++ ..+|.+.|+.++++|.++||++++|+|+++++++.+
T Consensus 21 ~~~~~~~~aI~~m~VrGApai~iaaa~~l~~~~~~~~~~~----~~~l~~~l~~~~~~L~~aRPtav~L~~a~~~~~~~i 96 (338)
T 3a11_A 21 KEVLEIAEKIKNMEIRGAGKIARSAAYALQLQAEKSKATN----VDEFWKEMKQAAKILFETRPTAVSLPNALRYVMHRG 96 (338)
T ss_dssp SHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHHCCCCS----HHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCcEeCcHHHHHHHHHHHHHHHHhccCCC----HHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHH
Confidence 5688899999999999999999999999999999987754 357889999999999999999999999999999988
Q ss_pred hc-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCC
Q psy17541 481 TQ-LPNDITDTQARLRLKEVIATYIHEQVDMAGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDG 559 (717)
Q Consensus 481 ~~-l~~~~s~ee~Ke~Lie~IdefI~ErI~~A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvES 559 (717)
+. +....+.+++|+.|++.+++|+++. ..+++.|++++.++|++|++|||||+|++|+++|+.|+++|++|+|||+||
T Consensus 97 ~~~~~~~~~~~~~k~~l~~~a~~~~~e~-~~~~~~I~~~g~~~I~~g~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~Et 175 (338)
T 3a11_A 97 KIAYSSGADLEQLRFVIINAAKEFIHNS-EKALERIGEFGAKRIEDGDVIMTHCHSKAAISVMKTAWEQGKDIKVIVTET 175 (338)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCCTTCEEEECSCCHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 74 2223578899999999999999654 568999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccCCcc
Q psy17541 560 SPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKF 639 (717)
Q Consensus 560 RP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyKF 639 (717)
||++||++||++|.+.|||||||+|+|++|+|.+||+||+|||+|++||+++||+|||++|++||+||||||||||+|||
T Consensus 176 RP~~qGrltA~eL~~~GI~vtlI~Dsa~~~~M~~Vd~VivGAd~V~anG~v~NKiGT~~lAl~Ak~~~vPfyV~a~~~k~ 255 (338)
T 3a11_A 176 RPKWQGKITAKELASYGIPVIYVVDSAARHYMKMTDKVVMGADSITVNGAVINKIGTALIALTAKEHRVWTMIAAETYKF 255 (338)
T ss_dssp TTTTHHHHHHHHHHHTTCCEEEECGGGTTTTGGGCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCEEEEECCGGGB
T ss_pred CCchhhHHHHHHHHhCCCCEEEEehHHHHHHHHhCCEEEECccEEecCCCEeecccHHHHHHHHHHcCCCEEEeccccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcccccccCCccccccccccccccccCCCccccccceeccCCCCccEEEeCCCCcCCCChhHHhhcC
Q psy17541 640 CERVQTDALVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCTSVPVVLRVK 712 (717)
Q Consensus 640 s~rv~~Ds~v~NEl~dP~EL~~~~~~l~~~~~~~~l~vlNp~FDvTPPeLIT~IITE~GIlpPsSVpvVLR~k 712 (717)
++.++.|..+++|+++|+|++.. +....| ++++.++||+||||||+|||+||||.|+++|++|+.+||++
T Consensus 256 d~~~~~g~~i~iE~r~~~ev~~~-g~~~~w--~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~p~~v~~~L~e~ 325 (338)
T 3a11_A 256 HPETMLGQLVEIEMRDPTEVIPE-DELKTW--PKNIEVWNPAFDVTPPEYVDVIITERGIIPPYAAIDILREE 325 (338)
T ss_dssp CSCCSSSSCCCCCBCCGGGTSCH-HHHTTS--CTTEEECCBSEEEECGGGCSEEEETTEEECGGGHHHHHHHH
T ss_pred cccCCCCcccccccCCHHHcccc-cccccC--CCCceecCcceeccCHHHcCEEecCCCccCchhHHHHHHHH
Confidence 99999999999999999999875 321123 57899999999999999999999999999999999999974
No 2
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=100.00 E-value=3.9e-65 Score=547.83 Aligned_cols=301 Identities=21% Similarity=0.265 Sum_probs=275.4
Q ss_pred HHHHHHHHHhcCcccChHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHhcCchhhhHHHHHHHHHHHHh
Q psy17541 402 AIYRLGVQYATGVVRGSNARCVALLSAIKQMVCDYTTPSEKEYSRGFEERLGPAMSYLNKCRPHSVSMLNAVKHFKSHLT 481 (717)
Q Consensus 402 AVlrLGlq~a~~~I~GSnaraiAaL~ALkqVI~Dy~tp~~~~lsr~L~~~Lk~ai~~L~~aRPtsVSmgNAIR~Lk~~I~ 481 (717)
.+..+...|+.++|+||+++++++..++...+....+.+ ..+|.+.|+.++++|.++||++++|+|+++++++.+.
T Consensus 58 ~~~~~~~aIk~m~VrGApaIgiaaa~~l~l~~~~~~~~~----~~~l~~~l~~~~~~L~~aRPtavnL~~ai~r~~~~i~ 133 (374)
T 2yvk_A 58 TKEDVFDAIVTLKVRGAPAIGITAAFGLALAAKDIETDN----VTEFRRRLEDIKQYLNSSRPTAINLSWALERLSHSVE 133 (374)
T ss_dssp SHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHTTCCCSC----HHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHhCccCCcHHHHHHHHHHHHHHHHhccCCC----HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999988766533 3578899999999999999999999999999999986
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEecCc--------hHHHHHHHHHHHcCCeeE
Q psy17541 482 QLPNDITDTQARLRLKEVIATYIHEQVDMAGNAICMFFHNKLANDDVILTYGCS--------SLVEKILLTAHEKGTKFR 553 (717)
Q Consensus 482 ~l~~~~s~ee~Ke~Lie~IdefI~ErI~~A~e~Ia~~A~e~I~dGdvILTyg~S--------StV~~vL~~A~e~Gk~Fr 553 (717)
.. .+++++|+.|++.+++|++|. ..+++.|++++.++|++|++|||||+| ++|+.+|+.|+++|++|+
T Consensus 134 ~~---~~~~~~k~~l~~~a~~~~~e~-~~~~~~I~~~g~~~I~~g~~ILThcnsg~Lat~g~gTal~~l~~A~~~gk~~~ 209 (374)
T 2yvk_A 134 NA---ISVNEAKTNLVHEAIQIQVED-EETCRLIGQNALQLFKKGDRIMTICNAGSIATSRYGTALAPFYLAKQKDLGLH 209 (374)
T ss_dssp TC---SSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHGGGCCTTCEEEECSCCSTTTSSSSCSTTHHHHHHHHTTCCCE
T ss_pred hc---CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCEEEEecCCCccccCCCcHHHHHHHHHHHcCCEEE
Confidence 53 468899999999999999654 569999999999999999999999977 588999999999999999
Q ss_pred EEEcCCCCchhH-HHHHHHHHhCCCcEEEEcchHHHHHhhh--ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcE
Q psy17541 554 VIIVDGSPWYEG-KEMLRRLVKHQVDCSYVLLSAVSYIMRE--VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPV 630 (717)
Q Consensus 554 VIVvESRP~~EG-r~lA~~L~~~GI~vTyI~DSAVsyiM~~--VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPV 630 (717)
|||+||||++|| ++||++|.+.|||||||+|+|++|+|++ ||+||+|||+|++||+++||+|||++|++||+|||||
T Consensus 210 V~v~EtRP~~qG~rltA~eL~~~GIpvtlI~Dsa~~~~M~~~~Vd~ViVGAD~V~aNG~v~NKiGTy~lAl~Ak~~~vPf 289 (374)
T 2yvk_A 210 IYACETRPVLQGSRLTAWELMQGGIDVTLITDSMAAHTMKEKQISAVIVGADRIAKNGDTANKIGTYGLAILANAFDIPF 289 (374)
T ss_dssp EEEECCTTTTHHHHTHHHHHHTTTCEEEEECGGGHHHHHHHTTCCEEEECCSEEETTCCEEEETTHHHHHHHHHHTTCCE
T ss_pred EEEeCCCCccccHHHHHHHHHHcCCCEEEEehhHHHHHhhhcCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCCE
Confidence 999999999999 5799999999999999999999999998 9999999999999999999999999999999999999
Q ss_pred EecccCCcccccccCCcccccccCCccccccccccccccccCCCccccccceeccCCCCccEEEeCCCCcCCCChhHHhh
Q psy17541 631 LAACETHKFCERVQTDALVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCTSVPVVLR 710 (717)
Q Consensus 631 yV~cEtyKFs~rv~~Ds~v~NEl~dP~EL~~~~~~l~~~~~~~~l~vlNp~FDvTPPeLIT~IITE~GIlpPsSVpvVLR 710 (717)
|||||+|||++.++.|..+.+|+++|+|+....+ .+..++++.++||+||||||+|||+||||.|+++|+...-+.+
T Consensus 290 yV~ap~~k~d~~~~~g~~i~iEer~~~Ev~~~~g---~~~~~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~P~~~~~l~~ 366 (374)
T 2yvk_A 290 FVAAPLSTFDTKVKCGADIPIEERDPEEVRQISG---VRTAPSNVPVFNPAFDITPHDLISGIITEKGIMTGNYEEEIEQ 366 (374)
T ss_dssp EEECCGGGEETTCSSGGGSCCCBCCTHHHHEETT---EECSCTTCCBCCBSEEEECGGGCSEEEETTEEECSCHHHHHHH
T ss_pred EEecccceeCccCCCccccccccCCHHHhcccCC---ceecCCCcceeCcceeccCHHHCCEEeccCCccCcchHHHHHH
Confidence 9999999999999998889999999999987643 2445688999999999999999999999999999987666555
Q ss_pred cCC
Q psy17541 711 VKP 713 (717)
Q Consensus 711 ~k~ 713 (717)
...
T Consensus 367 ~~~ 369 (374)
T 2yvk_A 367 LFK 369 (374)
T ss_dssp HTC
T ss_pred Hhh
Confidence 444
No 3
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=100.00 E-value=1.4e-64 Score=539.71 Aligned_cols=298 Identities=23% Similarity=0.257 Sum_probs=272.3
Q ss_pred HHHHHHHHHhcCcccChHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHhcCchhhhHHHHHHHHHHHHh
Q psy17541 402 AIYRLGVQYATGVVRGSNARCVALLSAIKQMVCDYTTPSEKEYSRGFEERLGPAMSYLNKCRPHSVSMLNAVKHFKSHLT 481 (717)
Q Consensus 402 AVlrLGlq~a~~~I~GSnaraiAaL~ALkqVI~Dy~tp~~~~lsr~L~~~Lk~ai~~L~~aRPtsVSmgNAIR~Lk~~I~ 481 (717)
.+..+...|+.++|+||+++++++..+|...+....+.+ ..+|.+.|+.++++|.++||++++|+|+++++++.++
T Consensus 31 ~~~~~~~aIk~m~VrGApai~iaaa~~l~l~~~~~~~~~----~~~l~~~l~~~~~~L~~aRPtav~l~~a~~~~~~~i~ 106 (351)
T 1t5o_A 31 NVEELADAIKKLAVRGAPALEAAGAYGIALAAREREFAD----VDELKEHLKKAADFLASTRPTAVNLFVGIERALNAAL 106 (351)
T ss_dssp SHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHTTSSCCSC----HHHHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCcCCcHHHHHHHHHHHHHHHHhccCCC----HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHh
Confidence 477888999999999999999999999999988765533 3578899999999999999999999999999999997
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEecCc--------hHHHHHHHHHHHcCCeeE
Q psy17541 482 QLPNDITDTQARLRLKEVIATYIHEQVDMAGNAICMFFHNKLANDDVILTYGCS--------SLVEKILLTAHEKGTKFR 553 (717)
Q Consensus 482 ~l~~~~s~ee~Ke~Lie~IdefI~ErI~~A~e~Ia~~A~e~I~dGdvILTyg~S--------StV~~vL~~A~e~Gk~Fr 553 (717)
. ..+++++|+.|++.+++|++|. ..+++.|++++.++|++|++|||||+| ++|+.+|+.|+++|++|+
T Consensus 107 ~---~~~~~~~k~~l~~~~~~~~~e~-~~~~~~I~~~g~~~I~~g~~ILThcnsg~lat~g~gtal~~l~~A~~~gk~~~ 182 (351)
T 1t5o_A 107 K---GESVEEVKELALREAEKLAEED-VERNRKMGEYGAELLEDGDVVLTYCNAGRLATVDWGTALGVVRSAVEQGKEIR 182 (351)
T ss_dssp T---CSSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTTCCTTCEEEECSCCSSSSSSSSCSHHHHHHHHHHTTCCCE
T ss_pred h---cCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCEEEEecCCccccccCCChHHHHHHHHHHCCCEEE
Confidence 5 3578899999999999999665 568999999999999999999999876 578999999999999999
Q ss_pred EEEcCCCCchhH-HHHHHHHHhCCCcEEEEcchHHHHHhhh--ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcE
Q psy17541 554 VIIVDGSPWYEG-KEMLRRLVKHQVDCSYVLLSAVSYIMRE--VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPV 630 (717)
Q Consensus 554 VIVvESRP~~EG-r~lA~~L~~~GI~vTyI~DSAVsyiM~~--VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPV 630 (717)
|||+||||++|| ++||++|.+.|||||||+|+|++|+|++ ||+||+|||+|++|| ++||+|||++|++||+|||||
T Consensus 183 V~v~EtRP~~qG~rlta~eL~~~GI~vtlI~Dsa~~~~M~~~~Vd~VivGAd~V~aNG-v~NKiGT~~lAl~Ak~~~vPf 261 (351)
T 1t5o_A 183 VIACETRPLNQGSRLTCWELMEDGIDVTLITDSMVGIVMQKGMVDKVIVGADRIVRDA-VFNKIGTYTVSVVAKHHNIPF 261 (351)
T ss_dssp EEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHHHHHHTTCCSEEEECCSEEETTE-EEEETTHHHHHHHHHHTTCCE
T ss_pred EEEeCCCcccccHHHHHHHHHhCCCCEEEEehhHHHHHhhcCCCCEEEECccchhhcC-cccccCHHHHHHHHHHcCCCE
Confidence 999999999999 5799999999999999999999999988 999999999999999 999999999999999999999
Q ss_pred EecccCCcccccccCCcccccccCCccccccccccccccccCCCccccccceeccCCCCccEEEeCCCCcCCCChhHHhh
Q psy17541 631 LAACETHKFCERVQTDALVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCTSVPVVLR 710 (717)
Q Consensus 631 yV~cEtyKFs~rv~~Ds~v~NEl~dP~EL~~~~~~l~~~~~~~~l~vlNp~FDvTPPeLIT~IITE~GIlpPsSVpvVLR 710 (717)
|||||+|||++. +.+..+++|+++|+|+....+ .+..++++.++||+||||||+|||+||||.|+++|++..-+.+
T Consensus 262 yV~a~~~k~d~~-~~g~~i~iEer~~~ev~~~~g---~~~~~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~p~~~~~l~~ 337 (351)
T 1t5o_A 262 YVAAPKATFDWE-RTAKDVVIEERPREELIFCGK---RQIAPLNVKVYNPAFDPTPLENVTALITEYGVIYPPYEVNVPK 337 (351)
T ss_dssp EEECCGGGBCTT-CCGGGCCCCBCCTHHHHEETT---EECSCTTCEECCBSEEEEEGGGCSEEEETTEEECSCHHHHHHH
T ss_pred EEeCccceeccc-cCCCccccccCCHHHhcccCC---eeecCCCcceeCccccCCCHHHCCEEEeCCCccCcchHHHHHH
Confidence 999999999999 888888999999999987643 2345678999999999999999999999999999998766655
Q ss_pred cC
Q psy17541 711 VK 712 (717)
Q Consensus 711 ~k 712 (717)
..
T Consensus 338 ~~ 339 (351)
T 1t5o_A 338 VL 339 (351)
T ss_dssp HT
T ss_pred HH
Confidence 43
No 4
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=100.00 E-value=1.4e-64 Score=539.13 Aligned_cols=296 Identities=19% Similarity=0.230 Sum_probs=269.7
Q ss_pred HHHHHHHHHHhcCcccChHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHhcCchhhhHHHHHHHHHHHH
Q psy17541 401 PAIYRLGVQYATGVVRGSNARCVALLSAIKQMVCDYTTPSEKEYSRGFEERLGPAMSYLNKCRPHSVSMLNAVKHFKSHL 480 (717)
Q Consensus 401 PAVlrLGlq~a~~~I~GSnaraiAaL~ALkqVI~Dy~tp~~~~lsr~L~~~Lk~ai~~L~~aRPtsVSmgNAIR~Lk~~I 480 (717)
..+..+...++.++|+||.++++++..++...+....+.+. .+.|+.++++|.++||++++|+|+++++++.+
T Consensus 35 ~~~~~~~~aIk~m~VrGAp~ig~aaa~~l~l~~~~~~~~~~-------~~~l~~~~~~L~~aRPtav~l~~a~~~~~~~i 107 (347)
T 1t9k_A 35 KTHEEVAHAIKEMIVRGAPAIGVAAAFGYVLGLRDYKTGSL-------TDWMKQVKETLARTRPTAVNLFWALNRMEKVF 107 (347)
T ss_dssp CSHHHHHHHHHHTSSCSHHHHHHHHHHHHHHHHHTCCSSCH-------HHHHHHHHHHHHTSCSSCTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCcCCcHHHHHHHHHHHHHHHHhcccCCH-------HHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 45778899999999999999999999999888887654221 24599999999999999999999999999999
Q ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEecCch--------HHHHHHHHHHHcCCee
Q psy17541 481 TQLPNDITDTQARLRLKEVIATYIHEQVDMAGNAICMFFHNKLANDDVILTYGCSS--------LVEKILLTAHEKGTKF 552 (717)
Q Consensus 481 ~~l~~~~s~ee~Ke~Lie~IdefI~ErI~~A~e~Ia~~A~e~I~dGdvILTyg~SS--------tV~~vL~~A~e~Gk~F 552 (717)
+... +.+++|+.|++.+++|+++ ...+++.|++++.++|++|++|||||+|+ +|+.+|+.|+++|++|
T Consensus 108 ~~~~---~~~~~k~~l~~~~~~~~~e-~~~~~~~I~~~g~~~I~~g~~ILThcns~~lat~~~gtvl~~l~~A~~~gk~~ 183 (347)
T 1t9k_A 108 FENA---DRENLFEILENEALKMAYE-DIEVNKAIGKNGAQLIKDGSTILTHCNAGALATVDYGTALGVIRAAVESGKRI 183 (347)
T ss_dssp HTTT---TCTTHHHHHHHHHHHHHHH-HHHHHHHHHHHHHTTSCTTEEEEECSCCSGGGSSSSCSHHHHHHHHHHTTCCE
T ss_pred HhcC---CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCEEEEecCCCccccCCccHHHHHHHHHHHCCCeE
Confidence 7542 5678999999999999965 45689999999999999999999999999 9999999999999999
Q ss_pred EEEEcCCCCchhH-HHHHHHHHhCCCcEEEEcchHHHHHhhh--ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCc
Q psy17541 553 RVIIVDGSPWYEG-KEMLRRLVKHQVDCSYVLLSAVSYIMRE--VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVP 629 (717)
Q Consensus 553 rVIVvESRP~~EG-r~lA~~L~~~GI~vTyI~DSAVsyiM~~--VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VP 629 (717)
+|||+||||++|| ++||++|.+.|||||||+|+|++|+|++ ||+||+|||+|++||+++||+|||++|++||+||||
T Consensus 184 ~V~v~EtRP~~qG~rlta~eL~~~GI~vtlI~Dsa~~~~M~~~~Vd~VivGAd~V~aNG~v~NKiGT~~lAl~Ak~~~vP 263 (347)
T 1t9k_A 184 RVFADETRPYLQGARLTAWELMKDGIEVYVITDNMAGWLMKRGLIDAVVVGADRIALNGDTANKIGTYSLAVLAKRNNIP 263 (347)
T ss_dssp EEEEECCTTTTHHHHTHHHHHHTTTCEEEEECGGGHHHHHHTTCCSEEEECCSEEETTSCEEEETTHHHHHHHHHHTTCC
T ss_pred EEEEeCCCCccccHHHHHHHHHhCCCCEEEEehhHHHHHhhcCCCCEEEECccEEecCCCEEecccHHHHHHHHHHcCCC
Confidence 9999999999999 5799999999999999999999999988 999999999999999999999999999999999999
Q ss_pred EEecccCCcccccccCCcccccccCCccccccccccccccccCCCccccccceeccCCCCccEEEeCCCCcCCCChhHHh
Q psy17541 630 VLAACETHKFCERVQTDALVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCTSVPVVL 709 (717)
Q Consensus 630 VyV~cEtyKFs~rv~~Ds~v~NEl~dP~EL~~~~~~l~~~~~~~~l~vlNp~FDvTPPeLIT~IITE~GIlpPsSVpvVL 709 (717)
||||||+|||++.++.+..+++|+++|+|+....+ .+..++++.++||+||||||+|||+||||.|+++|+....+.
T Consensus 264 fyV~ap~~k~d~~~~~g~~i~iE~r~~~ev~~~~g---~~~~~~~v~v~NPaFDvTP~~lIt~iITE~Gv~~p~~~~~l~ 340 (347)
T 1t9k_A 264 FYVAAPVSTIDPTIRSGEEIPIEERRPEEVTHCGG---NRIAPEGVKVLNPAFDVTENTLITAIITEKGVIRPPFEENIK 340 (347)
T ss_dssp EEEECCGGGEETTCSSGGGSCCCBCCTHHHHEETT---EECSCTTCEECCBSEEEECGGGCSEEEETTEEECSSHHHHHH
T ss_pred EEEecccceeccccCCccccccccCChHhccccCC---eeccCCCccccCcccccCCHHHCCEEeccCCccCcchHHHHH
Confidence 99999999999999988889999999999987643 244568899999999999999999999999999998876655
Q ss_pred h
Q psy17541 710 R 710 (717)
Q Consensus 710 R 710 (717)
+
T Consensus 341 ~ 341 (347)
T 1t9k_A 341 K 341 (347)
T ss_dssp H
T ss_pred H
Confidence 4
No 5
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=100.00 E-value=6.6e-64 Score=539.72 Aligned_cols=296 Identities=19% Similarity=0.270 Sum_probs=263.9
Q ss_pred HHHHHHHHHhcCcccChHHHHHHHH----HHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHhcCchhhhHHHHHHHHH
Q psy17541 402 AIYRLGVQYATGVVRGSNARCVALL----SAIKQMVCDYTTPSEKEYSRGFEERLGPAMSYLNKCRPHSVSMLNAVKHFK 477 (717)
Q Consensus 402 AVlrLGlq~a~~~I~GSnaraiAaL----~ALkqVI~Dy~tp~~~~lsr~L~~~Lk~ai~~L~~aRPtsVSmgNAIR~Lk 477 (717)
.+..+...|+.++|+||.++++++. .++++++....|.+ ..+|.+.|+.++++|.++||++++|+|++++++
T Consensus 47 ~~~~~~~aIk~m~VrGApaIgiaaa~~l~l~~~~~~~~~~~~~----~~~l~~~l~~~~~~L~~aRPtavnL~na~~r~~ 122 (383)
T 2a0u_A 47 TVEDIWSAIKEMRVRGAPAIAVSAALGIAVATQRKAANGELKS----GREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLK 122 (383)
T ss_dssp SHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHHHSSCCC----HHHHHHHHHHHHHHHTTSCCSCSHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHhhcccccCCC----HHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 5788999999999999999955544 55556555444444 357889999999999999999999999999999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--------CCCeEEEecCc--------hHHHHH
Q psy17541 478 SHLTQLPNDITDTQARLRLKEVIATYIHEQVDMAGNAICMFFHNKLA--------NDDVILTYGCS--------SLVEKI 541 (717)
Q Consensus 478 ~~I~~l~~~~s~ee~Ke~Lie~IdefI~ErI~~A~e~Ia~~A~e~I~--------dGdvILTyg~S--------StV~~v 541 (717)
+.++....+.+++++|+.|++.+++|++|. ..+++.|++++.++|. +|++|||||+| ++|+++
T Consensus 123 ~~i~~~~~~~~~~~~k~~l~~~a~~i~~e~-~~~~~~I~~~g~~~I~~~~~~~~~~g~~ILThcnsg~Lat~g~gTal~~ 201 (383)
T 2a0u_A 123 AQVDKLDPTKAAAEVAQAFVELAEAVYTND-VAFNEGIMRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYGTALGV 201 (383)
T ss_dssp HHHHHSCTTSCSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCSSEEEEECSCCSTTTSSSSCSHHHH
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhccccCCCCCEEEEecCCcchhcCCCchHHHH
Confidence 999864333578899999999999999665 4699999999999999 99999999987 689999
Q ss_pred HHHHHHcCCeeEEEEcCCCCchhH-HHHHHHHHhCCCcEEEEcchHHHHHhhh--ccEEEEceeeEecCCCeecccchHH
Q psy17541 542 LLTAHEKGTKFRVIIVDGSPWYEG-KEMLRRLVKHQVDCSYVLLSAVSYIMRE--VSKVIIGAHALLSNGAVMSRAGTAQ 618 (717)
Q Consensus 542 L~~A~e~Gk~FrVIVvESRP~~EG-r~lA~~L~~~GI~vTyI~DSAVsyiM~~--VdkVLLGAdaVlaNG~VvNKiGT~~ 618 (717)
|+.|+++|++|+|||+||||++|| |+||++|.+.|||||||+|+|++|+|++ ||+||||||+|++||+++||+|||+
T Consensus 202 l~~A~~~gk~~~V~v~EtRP~~qGarltA~eL~~~GIpvtlI~Dsa~~~~M~~~~Vd~ViVGAD~V~aNG~v~NKiGTy~ 281 (383)
T 2a0u_A 202 VRQLFYDGKLERVYACETRPWNQGARLTVYECVQEDIPCTLICDGAASSLMLNRKIDAVVVGADRICQNGDTANKIGTYN 281 (383)
T ss_dssp HHHHHHTTCEEEEEEECCTTTTHHHHTHHHHHHHTTCCEEEECGGGHHHHHHHSCCCEEEECCSEECTTCCEEEETTHHH
T ss_pred HHHHHHcCCeEEEEEeCCCCccchHHHHHHHHHHcCCCEEEEehhHHHHHhhcCCCCEEEECccEEecCCCEeecccHHH
Confidence 999999999999999999999999 5899999999999999999999999998 9999999999999999999999999
Q ss_pred HHHHHHhCCCcEEecccCCcccccccCCcccccccCCcccccccc--ccccccccCCC--ccccccceeccCCCCcc-EE
Q psy17541 619 VSLVARAFNVPVLAACETHKFCERVQTDALVFNELGDPNELISDK--SAAKNWKSLAH--LTPLSLTYDITPSHLVT-AV 693 (717)
Q Consensus 619 VALaAK~~~VPVyV~cEtyKFs~rv~~Ds~v~NEl~dP~EL~~~~--~~l~~~~~~~~--l~vlNp~FDvTPPeLIT-~I 693 (717)
+|++||+||||||||||+|||++.++.|..+.+|+++|+||+..+ +. .+ .+++ +.++||+||||||+||| +|
T Consensus 282 lAl~Ak~~~vPfyV~ap~~k~d~~~~~g~~i~iEer~~~Ev~~~~~~g~--~~-a~~~~~v~v~NPaFDvTP~~lIt~~i 358 (383)
T 2a0u_A 282 LAVSAKFHGVKLYVAAPTTTLDVKTASGNHVEIEEREPTEITTNLVTKQ--RV-VADGPHLSIWNPVFDITPSELITGGI 358 (383)
T ss_dssp HHHHHHHTTCCEEEECCGGGBCTTCCSGGGSCCCBCCTHHHHBCTTTCC--BC-SCCCTTEEECCBSEEEECGGGCCSEE
T ss_pred HHHHHHHcCCCEEEeCCcceecCcCCCccccccccCCHHHhcccccCCc--ee-cCCCCceeeecccccccChHHCCcEE
Confidence 999999999999999999999999999888999999999998762 21 11 2455 99999999999999999 99
Q ss_pred EeCCCCcCCCCh
Q psy17541 694 ITELAIVPCTSV 705 (717)
Q Consensus 694 ITE~GIlpPsSV 705 (717)
|||.|+++|+.+
T Consensus 359 ITE~Gv~~p~~~ 370 (383)
T 2a0u_A 359 ITEKGVQAPAAS 370 (383)
T ss_dssp ECSSCEECCCSS
T ss_pred EccCCccCCccc
Confidence 999999977553
No 6
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=100.00 E-value=3.9e-64 Score=520.46 Aligned_cols=274 Identities=23% Similarity=0.287 Sum_probs=260.0
Q ss_pred hhHHHHHHHHHHhcCcccChHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHhcCchhhhHHHHHHHHHH
Q psy17541 399 VHPAIYRLGVQYATGVVRGSNARCVALLSAIKQMVCDYTTPSEKEYSRGFEERLGPAMSYLNKCRPHSVSMLNAVKHFKS 478 (717)
Q Consensus 399 IHPAVlrLGlq~a~~~I~GSnaraiAaL~ALkqVI~Dy~tp~~~~lsr~L~~~Lk~ai~~L~~aRPtsVSmgNAIR~Lk~ 478 (717)
+|+.+..++.+|++++|+||+++|++++.+|..++.++ ++ .+|++.|+.++++|.++||++++|+|++|++
T Consensus 2 l~~~~~~~~~~i~~~~vrGa~~i~~aa~~~l~~~~~~~-~~------~~~~~~l~~~~~~L~~~RPtav~l~~a~~~~-- 72 (276)
T 1vb5_A 2 LPERVLEILREMKRERIKGASWLAKKGAEAFLTLAEEL-DE------SLLEDAIMELREEVVKVNPSMASLYNLARFI-- 72 (276)
T ss_dssp CCHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHS-CT------TTHHHHHHHHHHHHHHHCTTCHHHHHHHHHS--
T ss_pred CcccHHHHHHHHHhCcEeCcHHHHHHHHHHHHHHHHhc-CH------HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHc--
Confidence 79999999999999999999999999999999999998 32 3588899999999999999999999999998
Q ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcC
Q psy17541 479 HLTQLPNDITDTQARLRLKEVIATYIHEQVDMAGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVD 558 (717)
Q Consensus 479 ~I~~l~~~~s~ee~Ke~Lie~IdefI~ErI~~A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvE 558 (717)
+.+++|+.|++.+++|++ ++..+++.|++++.++|+||++|||||+|++|+.+|+.|+++|++|+|||+|
T Consensus 73 ---------~~~~~k~~l~~~~~~~~~-~~~~~~~~Ia~~a~~~I~~g~~IlT~~~s~Tv~~~l~~a~~~~~~~~V~v~e 142 (276)
T 1vb5_A 73 ---------PVTNRRDILKSRALEFLR-RMEEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKERKKRFKVILTE 142 (276)
T ss_dssp ---------CCCSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCTTEEEECCSCCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ---------CHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHccCCCEEEEeCCChHHHHHHHHHHHcCCeEEEEEeC
Confidence 135678899999999994 6788999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccCCc
Q psy17541 559 GSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHK 638 (717)
Q Consensus 559 SRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyK 638 (717)
|||++||+.+|++|.+.||+|+||+|++++++|++||+||+|||+|++||+++|++|||++|++|++|++||||+||+||
T Consensus 143 trP~~qG~~~a~~L~~~gI~vtli~dsa~~~~m~~vd~vivGAd~i~~nG~v~nkiGt~~iA~~A~~~~vp~~V~a~~~K 222 (276)
T 1vb5_A 143 SSPDYEGLHLARELEFSGIEFEVITDAQMGLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHENAIPFYVAAETYK 222 (276)
T ss_dssp CTTTTHHHHHHHHHHHTTCCEEEECGGGHHHHHTTCSEEEECCSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGG
T ss_pred CCcchhhHHHHHHHHHCCCCEEEEcHHHHHHHHccCCEEEEcccEEecCCCEeechhHHHHHHHHHHcCCCEEEeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCcccccccCCccccccccccccccccCCCccccccceeccCCCCccEEEeCCCCcCCCChh
Q psy17541 639 FCERVQTDALVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCTSVP 706 (717)
Q Consensus 639 Fs~rv~~Ds~v~NEl~dP~EL~~~~~~l~~~~~~~~l~vlNp~FDvTPPeLIT~IITE~GIlpPsSVp 706 (717)
|++. ..+..+.+|+++|+| +++.++||.|||||++|||+||||.|+++|++||
T Consensus 223 ~~~~-~~~~~i~iE~r~~~e--------------~~v~v~np~fD~tP~~lI~~iITe~Gv~~p~~v~ 275 (276)
T 1vb5_A 223 FHPT-LKSGDVMLMERDLIR--------------GNVRIRNVLFDVTPWKYVRGIITELGIVIPPRDI 275 (276)
T ss_dssp BCSS-CCGGGCCCCBCCCEE--------------TTEECCCBCEEEECGGGCSEEEETTEEECTTTTC
T ss_pred cCcc-cCccccccccCCccc--------------cCccccCCCeEecCHHHCCEEEeCCCccCccccC
Confidence 9998 778889999999876 4678999999999999999999999999999987
No 7
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-62 Score=517.00 Aligned_cols=281 Identities=22% Similarity=0.309 Sum_probs=240.8
Q ss_pred hHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHHHHHhcCchhhhHHHHHHHHHHHHhcCC-CCCCHHHHHHHH
Q psy17541 418 SNARCVALLSAIKQMVCDYTTPSEKEYSRGFEERLGPAMSYLNKCRPHSVSMLNAVKHFKSHLTQLP-NDITDTQARLRL 496 (717)
Q Consensus 418 SnaraiAaL~ALkqVI~Dy~tp~~~~lsr~L~~~Lk~ai~~L~~aRPtsVSmgNAIR~Lk~~I~~l~-~~~s~ee~Ke~L 496 (717)
.-+.+++++++|.+++....+.+ ..+|...|+.++++|.++|| +++|+|+++++++.|.... ...+++++|+.|
T Consensus 19 ~~s~aiAAi~aL~~~l~~s~~~T----~~el~~~l~~a~~~L~~~r~-avsl~~a~~~~~~~i~~~~~~~~~~~~~k~~l 93 (315)
T 3ecs_A 19 DMASAVAAIRTLLEFLKRDKGET----IQGLRANLTSAIETLCGVDS-SVAVSSGGELFLRFISLASLEYSDYSKCKKIM 93 (315)
T ss_dssp TSCHHHHHHHHHHHHHTCCC--------CHHHHHHHHHHHTTTTTSC-CHHHHHHHHHHHHHCC-----------CTTHH
T ss_pred chHHHHHHHHHHHHHHHhCCCCC----HHHHHHHHHHHHHHHHhCCC-CccHHHHHHHHHHHHHHhhcccCCHHHHHHHH
Confidence 45678999999999999977654 45788999999999999997 8899999999999875431 234678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCC
Q psy17541 497 KEVIATYIHEQVDMAGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQ 576 (717)
Q Consensus 497 ie~IdefI~ErI~~A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~G 576 (717)
++.++.|+ +++..+++.|++++.++|+||++|||||+|++|+++|+.|+++|++|+|||+||||++||..|+++|.+.|
T Consensus 94 ~~~~~~~~-~~~~~a~~~I~~~~~~~I~~g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~g 172 (315)
T 3ecs_A 94 IERGELFL-RRISLSRNKIADLCHTFIKDGATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLN 172 (315)
T ss_dssp HHHHHHHH-HHHTTHHHHHHHHHGGGCCTTEEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTT
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHcCCCCEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcC
Confidence 99999999 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccCCcccccccCCc-ccccccCC
Q psy17541 577 VDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKFCERVQTDA-LVFNELGD 655 (717)
Q Consensus 577 I~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyKFs~rv~~Ds-~v~NEl~d 655 (717)
|+||||+|++++|+|++||+||+|||+|++||+++||+|||++|++||+||||||||||+|||++.++.+. .+.+|+++
T Consensus 173 I~vtli~Dsa~~~~m~~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V~a~~~K~~~~~~~~~~~i~~e~~~ 252 (315)
T 3ecs_A 173 VPVTVVLDAAVGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYVVAESFKFVRLFPLNQQDVPDKFKY 252 (315)
T ss_dssp CCEEEECGGGHHHHGGGCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEEECCGGGBCSCCCSSGGGSCGGGTC
T ss_pred CCEEEEehhHHHHHHHhCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEEEeccccccccCCCCcccCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999887553 34689999
Q ss_pred ccccccccccccccccCCCccccccceeccCCCCccEEEeCCCCcCCCChhHHhh
Q psy17541 656 PNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCTSVPVVLR 710 (717)
Q Consensus 656 P~EL~~~~~~l~~~~~~~~l~vlNp~FDvTPPeLIT~IITE~GIlpPsSVpvVLR 710 (717)
+.+++..+ ....++.++||.||||||+|||+||||.|+++|++|+..|.
T Consensus 253 ~~ev~~~~------~~~~~v~v~NP~fDvTP~~lIt~iITe~Gv~~p~~vs~eLi 301 (315)
T 3ecs_A 253 KADTLKVA------QTGQDLKEEHPWVDYTAPSLITLLFTDLGVLTPSAVSDELI 301 (315)
T ss_dssp -------------------CCBCCCSEEEECGGGCSEEEETTEEECGGGHHHHHH
T ss_pred hhhccccc------cCCCcCcCCCCCccCCCHHHcCEEEcCCCCCCcchhhHHHH
Confidence 98876542 24568999999999999999999999999999999987554
No 8
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=100.00 E-value=3.7e-47 Score=375.80 Aligned_cols=159 Identities=19% Similarity=0.314 Sum_probs=148.1
Q ss_pred CCeeEEEEcCCCCchhHH-HHHHHHHhCCCcEEEEcchHHHHHhhh----ccEEEEceeeEecCCCeecccchHHHHHHH
Q psy17541 549 GTKFRVIIVDGSPWYEGK-EMLRRLVKHQVDCSYVLLSAVSYIMRE----VSKVIIGAHALLSNGAVMSRAGTAQVSLVA 623 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr-~lA~~L~~~GI~vTyI~DSAVsyiM~~----VdkVLLGAdaVlaNG~VvNKiGT~~VALaA 623 (717)
|++|+|||+||||++||. +||++|.++||+||||+|+|++|+|++ ||+||||||+|++||+++||+|||++||+|
T Consensus 2 ~k~~~V~v~EsRP~~qG~rlta~eL~~~gI~vtlI~Dsa~~~~m~~~~~~Vd~VivGAd~v~~nG~v~nkiGT~~~Al~A 81 (191)
T 1w2w_B 2 PRMGHVFPLETRPYNQGSRLTAYELVYDKIPSTLITDSSIAYRIRTSPIPIKAAFVGADRIVRNGDTANKIGTLQLAVIC 81 (191)
T ss_dssp CEEEEEEEBCCTTTTHHHHTHHHHHHHHTCCBEEBCGGGHHHHHHHCSSCEEEEEECCSEECTTSCEEEETTHHHHHHHH
T ss_pred CcEEEEEEcCCCCccccHHHHHHHHHHcCCCEEEEechHHHHHHHhCCCCCCEEEECccEEecCCCEEecccHHHHHHHH
Confidence 689999999999999995 789999999999999999999999998 999999999999999999999999999999
Q ss_pred HhCCCcEEecccCCcccccccCCcccccccCCccccccccccc-------------------cccccCCCccccccceec
Q psy17541 624 RAFNVPVLAACETHKFCERVQTDALVFNELGDPNELISDKSAA-------------------KNWKSLAHLTPLSLTYDI 684 (717)
Q Consensus 624 K~~~VPVyV~cEtyKFs~rv~~Ds~v~NEl~dP~EL~~~~~~l-------------------~~~~~~~~l~vlNp~FDv 684 (717)
|+|+||||||||+|||+++++.+..+.+|+++|+|+...++.+ ..|...+++.++||+|||
T Consensus 82 k~~~vPf~V~a~~~k~~~~~~~g~~i~iE~r~~~ev~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~v~Np~fDv 161 (191)
T 1w2w_B 82 KQFGIKFFVVAPKTTIDNVTETGDDIIVEERNPEEFKVVTGTVINPENGSLILNESGEPITGKVGIAPLEINVWNPAFDI 161 (191)
T ss_dssp HHHTCEEEEECCGGGBCSSCCSGGGCCCCBCCTHHHHEEEEEEBCTTTCCBCBCTTSCBCEEEEECSCTTCEECCBSEEE
T ss_pred HHcCCCEEEecccceeeeccCCcceeecccCCHHHhccccCccccccccccccccccccccccccccCCCcccccccccc
Confidence 9999999999999999999999888999999999998875421 125667899999999999
Q ss_pred cCCCCccEEEeCCCCcCCCChhH
Q psy17541 685 TPSHLVTAVITELAIVPCTSVPV 707 (717)
Q Consensus 685 TPPeLIT~IITE~GIlpPsSVpv 707 (717)
|||+|||+||||.|+++|+++..
T Consensus 162 TP~~lIt~iITE~Gv~~ps~~~~ 184 (191)
T 1w2w_B 162 TPHELIDGIITEEGVFTKNSSGE 184 (191)
T ss_dssp ECGGGCSEEEETTEEECCCTTSC
T ss_pred CCHHHcCEEEecCcccCCCCcch
Confidence 99999999999999999988764
No 9
>1w2w_A 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=99.68 E-value=1.9e-16 Score=158.98 Aligned_cols=147 Identities=14% Similarity=0.075 Sum_probs=122.8
Q ss_pred HHHHHHHHHhcCcccChHHHHHHHHHHHHHHHhhcC-CCChh-----hH--HHHHHHHHHHHHHHHHhcCchhhhHHHHH
Q psy17541 402 AIYRLGVQYATGVVRGSNARCVALLSAIKQMVCDYT-TPSEK-----EY--SRGFEERLGPAMSYLNKCRPHSVSMLNAV 473 (717)
Q Consensus 402 AVlrLGlq~a~~~I~GSnaraiAaL~ALkqVI~Dy~-tp~~~-----~l--sr~L~~~Lk~ai~~L~~aRPtsVSmgNAI 473 (717)
.+......|+.++|+|++++++++..+|.-.+..+. ..+.. .| ..+|...|+..+++|.++||++|+|+|++
T Consensus 37 ~~~~v~~AIk~M~VRGAPaIgiaAA~glal~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~sRPTAVNL~~Al 116 (211)
T 1w2w_A 37 TIDDGYSVIKSMQVRGAPAIAIVGSLSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSL 116 (211)
T ss_dssp SHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHHCTTSTGGGGSCTTCHHHHHHHHHHHHHHHHTSCCSCSHHHHHH
T ss_pred CHHHHHHHHHCCcccCchHHHHHHHHHHHHHHHhccccCChhhcccccccchHHHHHHHHHHHHHHHhcCCchhhHHHHH
Confidence 356778889999999999999999988887776532 11111 00 11678889999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------c---CCCeEEEecCc--------h
Q psy17541 474 KHFKSHLTQLPNDITDTQARLRLKEVIATYIHEQVDMAGNAICMFFHNKL------A---NDDVILTYGCS--------S 536 (717)
Q Consensus 474 R~Lk~~I~~l~~~~s~ee~Ke~Lie~IdefI~ErI~~A~e~Ia~~A~e~I------~---dGdvILTyg~S--------S 536 (717)
++|+..+... .+.+++++.+++.++.|+++.+ .+++.|+++++++| . +|++|||||++ .
T Consensus 117 ~r~~~~~~~~---~~~~~~~~~l~~~a~~i~~ed~-~~n~~IG~~Ga~lI~~~~~~~~~~dg~~ILTHCNtG~LAT~g~G 192 (211)
T 1w2w_A 117 VEIKNILKSS---SDLKAFDGSLYNYVCELIDEDL-ANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYG 192 (211)
T ss_dssp HHHHHHHHTC---SSHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECSCCSGGGSSSSC
T ss_pred HHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcccccCCCCCeEEeECCCchHhhcCcc
Confidence 9999988653 4678899999999999996655 58999999999999 8 89999999999 6
Q ss_pred HHHHHHHHHHHcCCee
Q psy17541 537 LVEKILLTAHEKGTKF 552 (717)
Q Consensus 537 tV~~vL~~A~e~Gk~F 552 (717)
|++.+|+.||+.|+.|
T Consensus 193 TALgvIr~a~~~Gk~~ 208 (211)
T 1w2w_A 193 TALGVIRSLWKDSLAK 208 (211)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCcc
Confidence 8899999999998765
No 10
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomi initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A*
Probab=98.16 E-value=5.5e-06 Score=83.91 Aligned_cols=116 Identities=13% Similarity=0.065 Sum_probs=87.2
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHc----CCe-eEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEK----GTK-FRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS 585 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~----Gk~-FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS 585 (717)
+.+.|++.|+++|+||++|.. |.+||+..++....+. +.+ ++| |+-| ..++..|...||++..+-.
T Consensus 8 ~K~~IA~~Aa~~I~dg~~I~L-gsGST~~~~~~~L~~~~~~~~l~~itv-VTnS------~~~a~~l~~~gi~v~~l~~- 78 (227)
T 1uj6_A 8 YKKEAAHAAIAYVQDGMVVGL-GTGSTARYAVLELARRLREGELKGVVG-VPTS------RATEELAKREGIPLVDLPP- 78 (227)
T ss_dssp HHHHHHHHHHTTCCTTCEEEE-CCSHHHHHHHHHHHHHHHTTSSCSCEE-EESS------HHHHHHHHHTTCCBCCCCT-
T ss_pred HHHHHHHHHHHHCCCCCEEEE-cCCHHHHHHHHHHhhhhhhcCCCCEEE-ECCc------HHHHHHHHhCCCeEEEcCC-
Confidence 578899999999999999985 5556667777666433 224 776 5444 5677888889998877621
Q ss_pred HHHHHhhhccEEEEceeeEecCCCeecccchHHH--HHHHHhCCCcEEecccCCccccc
Q psy17541 586 AVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQV--SLVARAFNVPVLAACETHKFCER 642 (717)
Q Consensus 586 AVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~V--ALaAK~~~VPVyV~cEtyKFs~r 642 (717)
.++|++|+|||.|-.++....-.|.+.+ +|+++. ...|||++++.||...
T Consensus 79 ------~~~D~af~Gadgvd~~~~~~~~~g~a~~kekiva~~-a~~~ivlaD~sK~~~~ 130 (227)
T 1uj6_A 79 ------EGVDLAIDGADEIAPGLALIKGMGGALLREKIVERV-AKEFIVIADHTKKVPV 130 (227)
T ss_dssp ------TCEEEEEECCSEEEGGGEEECCTTSCHHHHHHHHHT-EEEEEEEEEGGGBCSS
T ss_pred ------CcCCEEEECCCccCccccEECCHHHHHHHHHHHHhc-cCCEEEEEEcchhccc
Confidence 3799999999999999855555566665 466663 3499999999999986
No 11
>2f8m_A Ribose 5-phosphate isomerase; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium; 2.09A {Plasmodium falciparum}
Probab=97.94 E-value=2.1e-05 Score=80.64 Aligned_cols=122 Identities=14% Similarity=0.108 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHh-hccCCCeEEEecCchHHHHHHHHHHHc---C-C-eeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 508 VDMAGNAICMFFHN-KLANDDVILTYGCSSLVEKILLTAHEK---G-T-KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 508 I~~A~e~Ia~~A~e-~I~dGdvILTyg~SStV~~vL~~A~e~---G-k-~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
+..+.++|+..|++ +|+||++|. +|.+||+..++....+. + . .++| |+-| ..++..|.+.||++..
T Consensus 9 ~~~~K~~iA~~Aa~~~I~dg~~Ig-LgsGST~~~~~~~L~~~~~~~~l~~itv-VTnS------~~~a~~l~~~gi~v~~ 80 (244)
T 2f8m_A 9 MDSLKKIVAYKAVDEYVQSNMTIG-LGTGSTVFYVLERIDNLLKSGKLKDVVC-IPTS------IDTELKARKLGIPLTT 80 (244)
T ss_dssp HHHHHHHHHHHHHHHHCCTTCEEE-ECCSTTTHHHHHHHHHHHHHTSSCSCEE-EESS------HHHHHHHHHHTCCBCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhhhhhccCCCCEEE-ECCc------HHHHHHHHHCCCeEEE
Confidence 34578899999999 999999987 78888878877766433 2 2 5666 4433 3567777778998776
Q ss_pred EcchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHH-HHHhCCCcEEecccCCccc-ccc
Q psy17541 582 VLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSL-VARAFNVPVLAACETHKFC-ERV 643 (717)
Q Consensus 582 I~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VAL-aAK~~~VPVyV~cEtyKFs-~rv 643 (717)
+- .++.+|+.|+|||.|-.+++++---|-+.+-- +.-....-|||++...||. ++.
T Consensus 81 l~------~~~~iD~afdGaDeId~~~glikg~g~Al~kekiva~~A~~~ivlaD~SK~~~~~L 138 (244)
T 2f8m_A 81 LE------KHSNIDITIDGTDEIDLNLNLIKGRGGALVREKLVASSSSLLIIIGDESKLCTNGL 138 (244)
T ss_dssp CC------SSCCBSEEEECCSEECTTCCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSCT
T ss_pred ec------ccCcCCEEEECCcccCCCCCcccCHHHHHHHHHHHHHhhCcEEEEEECCccccccC
Confidence 62 34589999999999999977776666665554 2445677899999999999 653
No 12
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A*
Probab=97.84 E-value=4.6e-05 Score=77.34 Aligned_cols=118 Identities=13% Similarity=0.124 Sum_probs=85.4
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHc---C-C-eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEK---G-T-KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS 585 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~---G-k-~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS 585 (717)
..+.|+..|+++|+||++|. +|.+||+..++....+. + . ++.| |+-| ...+..|.+.||++..+ .
T Consensus 6 ~K~~IA~~Aa~~I~dg~~I~-LdsGST~~~~a~~L~~~~~~~~l~~itv-VTnS------~~~a~~l~~~gi~vi~l--~ 75 (229)
T 1lk5_A 6 MKKIAAKEALKFIEDDMVIG-LGTGSTTAYFIKLLGEKLKRGEISDIVG-VPTS------YQAKLLAIEHDIPIASL--D 75 (229)
T ss_dssp HHHHHHHHHGGGCCTTCEEE-ECCSHHHHHHHHHHHHHHHTTSSCSCEE-EESS------HHHHHHHHHTTCCBCCG--G
T ss_pred HHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhhhhhhccCCCEEE-ECCc------HHHHHHHHhCCCeEEEe--C
Confidence 57789999999999999987 68888888888776543 2 1 5666 4443 35677788889887653 2
Q ss_pred HHHHHhhhccEEEEceeeEecCCCeecccchHHHH--HHHHhCCCcEEecccCCcccccc
Q psy17541 586 AVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVS--LVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 586 AVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VA--LaAK~~~VPVyV~cEtyKFs~rv 643 (717)
. +.++|+.|+|||.|-.+++++.-.|-+.+- +++ ....-|||++...||....
T Consensus 76 ~----~~~~D~af~Gadgid~~~g~~~~~~~a~~kekiv~-~~A~~~ivlaD~SK~~~~l 130 (229)
T 1lk5_A 76 Q----VDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIE-YRAGTFIVLVDERKLVDYL 130 (229)
T ss_dssp G----CSCEEEEEECCSEECTTCCEECCTTSCHHHHHHHH-HTEEEEEEEEEGGGBCSST
T ss_pred C----cccCCEEEECCCeECCCCCeecCHHHHHHHHHHHH-HhcCCeEEEEchhhhhhhc
Confidence 1 258999999999999887666544444443 333 2445899999999998764
No 13
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1
Probab=97.84 E-value=2.5e-05 Score=78.81 Aligned_cols=119 Identities=13% Similarity=0.135 Sum_probs=86.2
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHH
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYI 590 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyi 590 (717)
..+.|++.|+++|++|++|. +|.+||+..++....+.+.+++|.|+-| ...+..|.+.||++..+ ..
T Consensus 6 ~K~~IA~~Aa~~I~dg~~I~-LdsGST~~~la~~L~~~~~~itv~VTnS------~~~a~~l~~~gi~vi~l--~~---- 72 (219)
T 1m0s_A 6 MKKLAAQAALQYVKADRIVG-VGSGSTVNCFIEALGTIKDKIQGAVAAS------KESEELLRKQGIEVFNA--ND---- 72 (219)
T ss_dssp HHHHHHHHHGGGCCTTSEEE-ECCSHHHHHHHHHHHTTGGGSCEEEESS------HHHHHHHHHTTCCBCCG--GG----
T ss_pred HHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhccCCCEEEEECCh------HHHHHHHHhCCCeEEEe--Cc----
Confidence 56789999999999999987 7888888888877754311577746555 35677788888887553 21
Q ss_pred hhhccEEEEceeeEecCCCeecccchHHHH--HHHHhCCCcEEecccCCcccccc
Q psy17541 591 MREVSKVIIGAHALLSNGAVMSRAGTAQVS--LVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 591 M~~VdkVLLGAdaVlaNG~VvNKiGT~~VA--LaAK~~~VPVyV~cEtyKFs~rv 643 (717)
+.++|+.|+|||.|-.++++..-.|-+.+- +++.. ..-||+++...||....
T Consensus 73 ~~~~D~af~Gadgid~~~g~~~~~~~a~~kekiv~~~-A~~~ivlaD~SK~~~~l 126 (219)
T 1m0s_A 73 VSSLDIYVDGADEINPQKMMIKGGGAALTREKIVAAL-AKKFICIVDSSKQVDVL 126 (219)
T ss_dssp CSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHHH-EEEEEEEEEGGGBCSST
T ss_pred cccCCEEEECcCeECCCCCeecCHHHHHHHHHHHHHh-cCcEEEEEeCcHHhhcc
Confidence 258999999999999876665544444433 34333 34899999999998764
No 14
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structu genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=97.68 E-value=8e-05 Score=75.52 Aligned_cols=119 Identities=13% Similarity=0.116 Sum_probs=87.4
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHH
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYI 590 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyi 590 (717)
..+.|+..|+++|++|++|.. |.+||+..++....+..+++.|.|+-| ...+..|.+.||++..+- .
T Consensus 12 ~K~~iA~~A~~~V~~g~~Igl-gsGST~~~~i~~L~~~~~~itv~VtnS------~~~a~~l~~~gi~l~~l~--~---- 78 (224)
T 3kwm_A 12 LKKLAATEAAKSITTEITLGV-GTGSTVGFLIEELVNYRDKIKTVVSSS------EDSTRKLKALGFDVVDLN--Y---- 78 (224)
T ss_dssp HHHHHHHHHHTTCCSSEEEEE-CCSHHHHHHHHHGGGCTTTEEEEEESC------HHHHHHHHHTTCCBCCHH--H----
T ss_pred HHHHHHHHHHHhCCCCCEEEE-CCcHHHHHHHHHHHhhcCceEEEECCc------HHHHHHHHHcCCeEEecC--c----
Confidence 567899999999999987654 778888888887755445677766655 356778888999865432 2
Q ss_pred hhhccEEEEceeeEecCCCeecccchHHH--HHHHHhCCCcEEecccCCcccccc
Q psy17541 591 MREVSKVIIGAHALLSNGAVMSRAGTAQV--SLVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 591 M~~VdkVLLGAdaVlaNG~VvNKiGT~~V--ALaAK~~~VPVyV~cEtyKFs~rv 643 (717)
+.++|+.|.|||.|-.++.++---|.+.+ -++| ....-|||++...||.++.
T Consensus 79 ~~~iD~afdGADevd~~~~liKGgg~al~rEKiva-~~A~~~iviaD~sK~~~~L 132 (224)
T 3kwm_A 79 AGEIDLYIDGADECNNHKELIKGGGAALTREKICV-AAAKKFICIIDESKKVNTL 132 (224)
T ss_dssp HCSEEEEEECCSEECTTSCEECCSSSCHHHHHHHH-HTEEEEEEEEEGGGBCSSB
T ss_pred cccccEEEECCCccccccCeecCchhhHHHHHHHH-HhcCcEEEEEeCchhhhhc
Confidence 25899999999999999877664444333 2333 3345789999999999764
No 15
>1xtz_A Ribose-5-phosphate isomerase; yeast; 2.10A {Saccharomyces cerevisiae}
Probab=97.55 E-value=0.00013 Score=75.75 Aligned_cols=118 Identities=14% Similarity=0.138 Sum_probs=85.3
Q ss_pred HHHHHHHHHHh-hcc--CCCeEEEecCchHHHHHHHHHHHc---CC------eeEEEEcCCCCchhHHHHHHHHHhCCCc
Q psy17541 511 AGNAICMFFHN-KLA--NDDVILTYGCSSLVEKILLTAHEK---GT------KFRVIIVDGSPWYEGKEMLRRLVKHQVD 578 (717)
Q Consensus 511 A~e~Ia~~A~e-~I~--dGdvILTyg~SStV~~vL~~A~e~---Gk------~FrVIVvESRP~~EGr~lA~~L~~~GI~ 578 (717)
..++|+..|++ +|. +|++|. +|.+||+..++....+. +. .+.| |+-| ...+..|.+.||+
T Consensus 21 ~K~~IA~~Aa~~~I~~~dg~~Ig-LgsGST~~~~a~~L~~~~~~~~l~~~~~~itv-VTnS------~~~a~~l~~~gi~ 92 (264)
T 1xtz_A 21 AKRAAAYRAVDENLKFDDHKIIG-IGSGSTVVYVAERIGQYLHDPKFYEVASKFIC-IPTG------FQSRNLILDNKLQ 92 (264)
T ss_dssp HHHHHHHHHHHHHCCTTTCCEEE-ECCCSSTHHHHHHHHHHHTSTTTHHHHTTCEE-EESS------HHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHhccCCCCCCEEE-EcChHHHHHHHHHHhHhhhccccccccCCEEE-ECCc------HHHHHHHHHCCCe
Confidence 57889999998 999 999987 77777777777766543 21 3665 4433 3567778888987
Q ss_pred EEEEcchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHH-HHHhCCCcEEecccCCccc-cc
Q psy17541 579 CSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSL-VARAFNVPVLAACETHKFC-ER 642 (717)
Q Consensus 579 vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VAL-aAK~~~VPVyV~cEtyKFs-~r 642 (717)
+..+ . .+..+|+.|+|||.|-.+++++.--|-+.+-- +......-|||++...||. ++
T Consensus 93 v~~l--~----~~~~iD~afdGADgId~~~~likg~g~A~~kekiva~~A~~~IvlaD~SK~~~~~ 152 (264)
T 1xtz_A 93 LGSI--E----QYPRIDIAFDGADEVDENLQLIKGGGACLFQEKLVSTSAKTFIVVADSRKKSPKH 152 (264)
T ss_dssp ECCT--T----TCCSEEEEEECCSEECTTSCEECCTTSCHHHHHHHHTTEEEEEEEEEGGGBCSSS
T ss_pred EEEe--h----hcCcCCEEEECCcccCCCCCeecCHHHHHHHHHHHHHhhCcEEEEEEcccccccc
Confidence 6554 2 22589999999999998876666655554443 2334566899999999999 54
No 16
>3l7o_A Ribose-5-phosphate isomerase A; RPIA; 1.70A {Streptococcus mutans}
Probab=97.47 E-value=0.00023 Score=72.30 Aligned_cols=118 Identities=9% Similarity=0.061 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHc----CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEK----GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA 586 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~----Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA 586 (717)
..+.|+..|+++|++|++|.. |.+||+..++....+. +.++.+ |+-| ..++..|.+.||++..+-+
T Consensus 4 ~K~~iA~~A~~~V~dg~vIgL-GsGST~~~~i~~L~~~~~~~~~~i~~-VttS------~~t~~~l~~~Gi~l~~l~~-- 73 (225)
T 3l7o_A 4 LKKIAGVRAAQYVEDGMIVGL-GTGSTAYYFVEEVGRRVQEEGLQVIG-VTTS------SRTTAQAQALGIPLKSIDE-- 73 (225)
T ss_dssp HHHHHHHHHHTTCCTTCEEEE-CCSTTHHHHHHHHHHHHHHHCCCCEE-EESS------HHHHHHHHHHTCCBCCGGG--
T ss_pred HHHHHHHHHHHhCCCCCEEEE-CCcHHHHHHHHHHHHhhhhcCCCEEE-EcCC------HHHHHHHhccCceEEecCc--
Confidence 467899999999999997665 6667767777665443 556666 4433 3466778888998865432
Q ss_pred HHHHhhhccEEEEceeeEecCCCeecccchHHH--HHHHHhCCCcEEecccCCcccccc
Q psy17541 587 VSYIMREVSKVIIGAHALLSNGAVMSRAGTAQV--SLVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 587 VsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~V--ALaAK~~~VPVyV~cEtyKFs~rv 643 (717)
..++|+.|.|||.|-.++.++---|.+.+ -++|. ...-|||++...||.++.
T Consensus 74 ----~~~iD~a~dGADevd~~~~liKGgG~al~rEKiva~-~A~~~iviaD~sK~~~~L 127 (225)
T 3l7o_A 74 ----VDSVDVTVDGADEVDPNFNGIKGGGGALLMEKIVGT-LTKDYIWVVDESKMVDTL 127 (225)
T ss_dssp ----SSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHH-TEEEEEEEEEGGGBCSSS
T ss_pred ----ccccCEEEEcCCccCcccCeecCchhhhHHHHHHHH-hCCeEEEEEecccchhhc
Confidence 45899999999999999887764444333 23333 345689999999999764
No 17
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, STRU genomics, seattle structural genomics center for infectious; HET: 5RP; 2.30A {Bartonella henselae}
Probab=97.47 E-value=0.00027 Score=72.95 Aligned_cols=119 Identities=13% Similarity=0.121 Sum_probs=82.6
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHH---cCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHH
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHE---KGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAV 587 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e---~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAV 587 (717)
..+.|+..|+++|++|++|. .|.+||+..++....+ .|.++.| |+-| ...+..|.+.||++..+-+
T Consensus 27 ~K~~iA~~A~~~V~dg~vIg-LGsGST~~~~i~~L~~~~~~gl~Itv-VttS------~~ta~~l~~~GI~l~~l~~--- 95 (255)
T 3hhe_A 27 LKKMAALKALEFVEDDMRLG-IGSGSTVNEFIPLLGERVANGLRVTC-VATS------QYSEQLCHKFGVPISTLEK--- 95 (255)
T ss_dssp HHHHHHHHHHTTCCTTEEEE-ECCSHHHHHHHHHHHHHHHTTCCEEE-EESS------HHHHHHHHHTTCCBCCTTT---
T ss_pred HHHHHHHHHHHhCCCCCEEE-ECCcHHHHHHHHHHHHhhccCCcEEE-EcCC------HHHHHHHHHcCCcEEeccc---
Confidence 46788999999999998655 4777887877776543 2435553 3333 3567788889998765422
Q ss_pred HHHhhhccEEEEceeeEecCCCeecccchHHHH-HHHHhCCCcEEecccCCcccccc
Q psy17541 588 SYIMREVSKVIIGAHALLSNGAVMSRAGTAQVS-LVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 588 syiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VA-LaAK~~~VPVyV~cEtyKFs~rv 643 (717)
+.++|+.|.|||.|-.+..++---|.+.+= =+.-....-|||++...||.++.
T Consensus 96 ---~~~iD~afdGADeVD~~~~lIKGgG~al~rEKiva~~A~~~ivIaD~SK~v~~L 149 (255)
T 3hhe_A 96 ---IPELDLDIDGADEIGPEMTLIKGGGGALLHEKIVASASRAMFVIADETKMVKTL 149 (255)
T ss_dssp ---CCSBSEEEECCSEECGGGCEECCTTSCHHHHHHHHHTBSCEEEEEEGGGBCSSS
T ss_pred ---ccccCEEEECCCccccccCeeeCchhhhHHHHHHHHhcCcEEEEEeCCCChhhh
Confidence 348999999999999987776533332221 22223456789999999999864
No 18
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein ST initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=97.46 E-value=2.5e-05 Score=78.85 Aligned_cols=119 Identities=8% Similarity=0.094 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHH
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYI 590 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyi 590 (717)
..+.|++.|+++|++|++|. +|.+||+..++....+...++.|.|+-|-+ .+..|.+.||++..+ ..
T Consensus 6 ~K~~IA~~Aa~lI~dg~~I~-LdsGST~~~la~~L~~~~~~itv~VTnS~~------~a~~l~~~gi~vi~l--~~---- 72 (219)
T 1o8b_A 6 LKKAVGWAALQYVQPGTIVG-VGTGSTAAHFIDALGTMKGQIEGAVSSSDA------STEKLKSLGIHVFDL--NE---- 72 (219)
T ss_dssp -----------------CEE-ECCSCC---------------CCEEESCCC------------------CCG--GG----
T ss_pred HHHHHHHHHHHhCCCCCEEE-EcChHHHHHHHHHHhccCCCEEEEECCcHH------HHHHHHhCCCeEEEe--Cc----
Confidence 46789999999999999988 677777777777664331156664666653 345566667765443 22
Q ss_pred hhhccEEEEceeeEecCCCeecccchHHHH--HHHHhCCCcEEecccCCcccccc
Q psy17541 591 MREVSKVIIGAHALLSNGAVMSRAGTAQVS--LVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 591 M~~VdkVLLGAdaVlaNG~VvNKiGT~~VA--LaAK~~~VPVyV~cEtyKFs~rv 643 (717)
+.++|+.|+|||.|-.++++..--|-+.+- +++.. ..-+|+++...||....
T Consensus 73 ~~~~D~af~Gadgid~~~~~~~~~~~a~~kekiv~~~-A~~~ivlaD~SK~~~~l 126 (219)
T 1o8b_A 73 VDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASV-AEKFICIADASKQVDIL 126 (219)
T ss_dssp CSCEEEEEECCSEECTTSCEECCCCC-HHHHHHHHHH-EEEEEEEEEGGGBCSSB
T ss_pred cCcCCEEEECcceECCCCCeecCHHHHHHHHHHHHHh-cCcEEEEEeCccccccc
Confidence 258999999999999887776444444443 33433 33899999999998763
No 19
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii} PDB: 3ixq_A*
Probab=97.41 E-value=0.00063 Score=69.09 Aligned_cols=117 Identities=11% Similarity=0.039 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHc----CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEK----GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA 586 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~----Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA 586 (717)
..+.|+..|+++|++|++|.. |.+||+..++....+. +.++.| |+-| ...+..|.+.||++.- ...
T Consensus 6 ~K~~iA~~A~~~I~~g~~Igl-gsGST~~~~~~~L~~~~~~~~l~itv-VtnS------~~~a~~l~~~gi~v~~--l~~ 75 (226)
T 2pjm_A 6 LKLKVAKEAVKLVKDGMVIGL-GTGSTAALFIRELGNRIREEELTVFG-IPTS------FEAKMLAMQYEIPLVT--LDE 75 (226)
T ss_dssp HHHHHHHHHGGGCCTTCEEEE-CCSHHHHHHHHHHHHHHHHHTCCCEE-EESS------HHHHHHHHHTTCCBCC--TTT
T ss_pred HHHHHHHHHHHHCCCCCEEEE-CCCHHHHHHHHHHHhhhhccCCcEEE-EeCc------HHHHHHHHhcCCeEEe--ecc
Confidence 567899999999999987665 6777777777665432 335554 3333 3566788889998762 221
Q ss_pred HHHHhhhccEEEEceeeEecC-CCeecccchHHH-H-HHHHhCCCcEEecccCCcccccc
Q psy17541 587 VSYIMREVSKVIIGAHALLSN-GAVMSRAGTAQV-S-LVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 587 VsyiM~~VdkVLLGAdaVlaN-G~VvNKiGT~~V-A-LaAK~~~VPVyV~cEtyKFs~rv 643 (717)
+. +|+.|.|||.|-.+ +.++---|.+.+ - ++| ....-|||++...||.++.
T Consensus 76 ----~~-iD~afdGaDevd~~t~~likGgg~al~rEKiva-~~A~~~IviaD~sK~~~~L 129 (226)
T 2pjm_A 76 ----YD-VDIAFDGADEVEETTLFLIKGGGGCHTQEKIVD-YNANEFVVLVDESKLVKKL 129 (226)
T ss_dssp ----CC-CSEEEECCSEEETTTCCEECCTTSCHHHHHHHH-HHSSEEEEEEEGGGEESST
T ss_pred ----cc-CCEEEEcCceeccccCceeeccchhhHHHHHHH-HHhCcEEEEEecchhhhcc
Confidence 33 99999999999999 766554443322 1 222 2345689999999999864
No 20
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=96.85 E-value=0.0018 Score=66.31 Aligned_cols=119 Identities=14% Similarity=0.146 Sum_probs=80.8
Q ss_pred HHHHHHHHHHhhccC----CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH
Q psy17541 511 AGNAICMFFHNKLAN----DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA 586 (717)
Q Consensus 511 A~e~Ia~~A~e~I~d----GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA 586 (717)
+.+.|+..|+++|++ |++|- .|.+||+..++....+..+++..+|.-| ..++..|.+.||++..+-+
T Consensus 14 ~K~~aA~~A~~~V~d~~~~g~vIG-LGtGST~~~~i~~L~~~~~~i~~~V~tS------~~t~~~~~~~Gi~l~~l~~-- 84 (239)
T 3uw1_A 14 LKRLVGEAAARYVTDNVPQGAVIG-VGTGSTANCFIDALAAVKDRYRGAVSSS------VATTERLKSHGIRVFDLNE-- 84 (239)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCEEE-ECCSHHHHHHHHHHHTTGGGSCEEEESS------HHHHHHHHHTTCCBCCGGG--
T ss_pred HHHHHHHHHHHHhhccCcCCCEEE-ECccHHHHHHHHHHHhhhccceEEeCCc------HHHHHHHHHcCCcEEeccc--
Confidence 345667777777776 88655 4788888888887765434565445444 4677888899998764321
Q ss_pred HHHHhhhccEEEEceeeEecCCCeecccchHHH--HHHHHhCCCcEEecccCCcccccc
Q psy17541 587 VSYIMREVSKVIIGAHALLSNGAVMSRAGTAQV--SLVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 587 VsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~V--ALaAK~~~VPVyV~cEtyKFs~rv 643 (717)
...+|+.|.|||.|-.++.++--=|.+.+ -++|. ...-|||++...||.++.
T Consensus 85 ----~~~iD~a~DGADeVd~~l~lIKGgGgal~rEKiva~-~A~~~ivIaD~sK~v~~L 138 (239)
T 3uw1_A 85 ----IESLQVYVDGADEIDESGAMIKGGGGALTREKIVAS-VAETFVCIADASKRVAML 138 (239)
T ss_dssp ----CSCEEEEEECCSEECTTCCEECCSSSCHHHHHHHHH-HEEEEEEEEEGGGBCSSB
T ss_pred ----ccccCEEEECCcccCcccCEecCchHHHHHHHHHHH-hCCcEEEEEecchhhhhc
Confidence 25899999999999998877663333221 12222 234689999999999764
No 21
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=90.42 E-value=1.1 Score=45.51 Aligned_cols=115 Identities=12% Similarity=0.087 Sum_probs=81.5
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHH----cCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHE----KGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA 586 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e----~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA 586 (717)
..+..+..|.++|++|. |+=.|..|||..++....+ .+.. +..+-| ...+...+.++||++.-+-+
T Consensus 7 ~K~~aa~~A~~~V~~gm-vvGlGTGSTv~~~i~~L~~~~~~~~l~--i~~V~t-----S~~t~~~a~~~Gi~l~~l~~-- 76 (228)
T 4gmk_A 7 LKQLVGTKAVEWIKDGM-IVGLGTGSTVKYMVDALGKRVNEEGLD--IVGVTT-----SIRTAEQAKSLGIVIKDIDE-- 76 (228)
T ss_dssp HHHHHHHHHGGGCCTTC-EEEECCSHHHHHHHHHHHHHHHHHCCC--CEEEES-----SHHHHHHHHHTTCCBCCGGG--
T ss_pred HHHHHHHHHHHhCCCCC-EEEECchHHHHHHHHHHHHHHhhcCCc--EEEEeC-----cHHHHHHHHHcCCceeChHH--
Confidence 45677888899999986 5667888888888876543 2443 332222 23566778888999876554
Q ss_pred HHHHhhhccEEEEceeeEecCCCeecccchH-----HHHHHHHhCCCcEEecccCCcccccc
Q psy17541 587 VSYIMREVSKVIIGAHALLSNGAVMSRAGTA-----QVSLVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 587 VsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~-----~VALaAK~~~VPVyV~cEtyKFs~rv 643 (717)
..++|..|=|||-|-.|..++--=|.+ .+|.+|+. |+|++...|+.++.
T Consensus 77 ----~~~iD~~iDGADEvd~~l~lIKGGGgal~rEKivA~~a~~----fI~IaD~sK~v~~L 130 (228)
T 4gmk_A 77 ----VDHIDLTIDGADEISSDFQGIKGGGAALLYEKIVATKSNK----NMWIVDESKMVDDL 130 (228)
T ss_dssp ----SSCEEEEEECCSEECTTSCEECCTTSCHHHHHHHHHHEEE----EEEEEEGGGBCSSS
T ss_pred ----CCccceEeccHHHhhhchhhhhcchHHHHHHHHHHHhhhh----eEEEeccccccCcc
Confidence 357999999999999988777555543 34455544 79999999998763
No 22
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=86.76 E-value=6.9 Score=32.82 Aligned_cols=99 Identities=16% Similarity=0.062 Sum_probs=64.2
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccEEEEcee
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL---SAVSYIMREVSKVIIGAH 602 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D---SAVsyiM~~VdkVLLGAd 602 (717)
+..|+..|.+..=..++..+.+.| .++|++++-.|. -+..+...|+....... ..+..++.++|.||..+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g-~~~v~~~~r~~~-----~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~- 77 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS-NYSVTVADHDLA-----ALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAA- 77 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS-SEEEEEEESCHH-----HHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECS-
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CceEEEEeCCHH-----HHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECC-
Confidence 457888888655445555555555 367888876542 22344466776543322 34566677888888765
Q ss_pred eEecCCCeecccchHHHHHHHHhCCCcEEecccCCccc
Q psy17541 603 ALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKFC 640 (717)
Q Consensus 603 aVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyKFs 640 (717)
| ...+..++..|...+++++.++...-+.
T Consensus 78 -----~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 106 (118)
T 3ic5_A 78 -----P----FFLTPIIAKAAKAAGAHYFDLTEDVAAT 106 (118)
T ss_dssp -----C----GGGHHHHHHHHHHTTCEEECCCSCHHHH
T ss_pred -----C----chhhHHHHHHHHHhCCCEEEecCcHHHH
Confidence 2 1246788999999999999887665543
No 23
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=86.21 E-value=4.6 Score=41.92 Aligned_cols=104 Identities=12% Similarity=0.114 Sum_probs=60.6
Q ss_pred cCCCeEEEecCchHHHHHHHHHH--HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch---------HHHHHh-
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAH--EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS---------AVSYIM- 591 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~--e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS---------AVsyiM- 591 (717)
....+++|-|.+..+..++..+. ..|...+|++. .|.+.|... .+...|+.+.++... ++-..+
T Consensus 104 ~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~--~p~~~~~~~--~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~ 179 (437)
T 3g0t_A 104 PARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFI--DPGFNLNKL--QCRILGQKFESFDLFEYRGEKLREKLESYLQ 179 (437)
T ss_dssp CGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEE--ESCCHHHHH--HHHHHTCCCEEEEGGGGCTTHHHHHHHHHHT
T ss_pred CcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEe--CCCcHhHHH--HHHHcCCEEEEEeecCCCCccCHHHHHHHHh
Confidence 34568888887777666666554 44542356655 567766432 333468888887642 233333
Q ss_pred -hhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 592 -REVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 592 -~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.++..|++ ..---..|.++..---..|+-+|++||+.|+|
T Consensus 180 ~~~~~~v~l-~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 220 (437)
T 3g0t_A 180 TGQFCSIIY-SNPNNPTWQCMTDEELRIIGELATKHDVIVIE 220 (437)
T ss_dssp TTCCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCceEEEE-eCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEE
Confidence 24555655 22222345554443344577789999998887
No 24
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=85.63 E-value=4.5 Score=41.19 Aligned_cols=102 Identities=13% Similarity=0.136 Sum_probs=66.4
Q ss_pred CCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCC--chhHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccEEEE
Q psy17541 526 DDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSP--WYEGKEMLRRLVKHQVDCSYVLL---SAVSYIMREVSKVII 599 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP--~~EGr~lA~~L~~~GI~vTyI~D---SAVsyiM~~VdkVLL 599 (717)
+.+||+.|-+..+-..|.. +.+.| ++|+++.-.+ ..+-...+..|...|+.+...-. .++..++.+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~----- 82 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH--RPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH----- 82 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC--CCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence 3578999887766655544 44556 4566555444 22333455677778887665433 3455666621
Q ss_pred ceeeEecCCCeecccchHHHHHHHHhCC-CcEEecc
Q psy17541 600 GAHALLSNGAVMSRAGTAQVSLVARAFN-VPVLAAC 634 (717)
Q Consensus 600 GAdaVlaNG~VvNKiGT~~VALaAK~~~-VPVyV~c 634 (717)
|+|.|+.+.+..|-.|+..+.-+|+..+ ++.+|.+
T Consensus 83 ~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S 118 (346)
T 3i6i_A 83 EIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPS 118 (346)
T ss_dssp TCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECS
T ss_pred CCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeec
Confidence 4555555566679999999999999999 9988864
No 25
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii}
Probab=85.36 E-value=2.4 Score=43.09 Aligned_cols=119 Identities=9% Similarity=0.058 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcC--CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHH
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKG--TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVS 588 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~G--k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVs 588 (717)
..+..+..|.++|++|. |+=.|..|||..++....+.. ....|+.+-+. ..+...+.+.||++..+-+ +
T Consensus 6 ~K~~aa~~A~~~V~~gm-vvGlGTGSTv~~~I~~L~~~~~~~~l~i~~v~tS-----~~t~~~a~~~gi~l~~l~~--~- 76 (226)
T 3ixq_A 6 LKLKVAKEAVKLVKDGM-VIGLGTGSTAALFIRELGNRIREEELTVFGIPTS-----FEAKMLAMQYEIPLVTLDE--Y- 76 (226)
T ss_dssp HHHHHHHHHGGGCCTTC-EEEECCSHHHHHHHHHHHHHHHHHTCCCEEEESS-----HHHHHHHHHTTCCBCCTTT--C-
T ss_pred HHHHHHHHHHHhCCCCC-EEEeCcHHHHHHHHHHHHHhhhhcCCeeEeeccc-----HHHHHHHHhcCCCcccccc--c-
Confidence 34567788899999987 557788899888887765421 12234433332 2455666678999765433 1
Q ss_pred HHhhhccEEEEceeeEecCC-CeecccchHHHH--HHHHhCCCcEEecccCCcccccc
Q psy17541 589 YIMREVSKVIIGAHALLSNG-AVMSRAGTAQVS--LVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 589 yiM~~VdkVLLGAdaVlaNG-~VvNKiGT~~VA--LaAK~~~VPVyV~cEtyKFs~rv 643 (717)
.+|..|=|||-|-..+ .++--=|.+.+= ++|. ...-|+|++...|+.+..
T Consensus 77 ----~iDl~iDGADEvd~~~l~lIKGGGgAl~rEKivA~-~a~~~I~I~D~sK~v~~L 129 (226)
T 3ixq_A 77 ----DVDIAFDGADEVEETTLFLIKGGGGCHTQEKIVDY-NANEFVVLVDESKLVKKL 129 (226)
T ss_dssp ----CCSEEEECCSEEETTTCCEECCTTSCHHHHHHHHH-HSSEEEEEEEGGGEESST
T ss_pred ----cccEEEeCcchhccccceEEecchHHHHHHHHHHH-HhhheEEEeccccchhhc
Confidence 3899999999996432 233222322211 2232 245578889999998753
No 26
>1poi_B Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.3
Probab=83.83 E-value=6.6 Score=40.34 Aligned_cols=92 Identities=15% Similarity=0.237 Sum_probs=55.8
Q ss_pred HHHHHHHHHhhccCCCeEEE-ecCchHHHHHHHHHHHcCCeeEEE----EcCCCCc----hhHHHHHHHHHhCCCcEEEE
Q psy17541 512 GNAICMFFHNKLANDDVILT-YGCSSLVEKILLTAHEKGTKFRVI----IVDGSPW----YEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 512 ~e~Ia~~A~e~I~dGdvILT-yg~SStV~~vL~~A~e~Gk~FrVI----VvESRP~----~EGr~lA~~L~~~GI~vTyI 582 (717)
.+.|+..++..|.||++|-+ +|-..+|..++...+ ++.+.+. ++...|. ..+. ..|. .....+
T Consensus 8 ~e~Ia~~aA~~i~dG~~v~lGiGiP~~va~~~~~~~--~~~l~l~~E~G~lg~~p~~~~~~~~d---~~~~---~~a~~~ 79 (260)
T 1poi_B 8 KEMQAVTIAKQIKNGQVVTVGTGLPLIGASVAKRVY--APDCHIIVESGLMDCSPVEVPRSVGD---LRFM---AHCGCI 79 (260)
T ss_dssp HHHHHHHHHTTCCTTCEEECCSSHHHHHHHHHHHTT--CTTCEEEETTTEEEECCSSCCSSTTC---HHHH---TSEEEE
T ss_pred HHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHHhc--CCCEEEEEeCceecCcccCcccCccC---CCcE---eehhhh
Confidence 56899999999999997665 454455565555533 3445444 2223342 1110 0111 134355
Q ss_pred cchHHHH-H-----hh--hccEEEEceeeEecCCCee
Q psy17541 583 LLSAVSY-I-----MR--EVSKVIIGAHALLSNGAVM 611 (717)
Q Consensus 583 ~DSAVsy-i-----M~--~VdkVLLGAdaVlaNG~Vv 611 (717)
.++.-.| + +. ++|..||||--|-.+|.|-
T Consensus 80 ~~~~~~fd~~~~~~~~~g~~Dv~ilGa~qVD~~Gnvn 116 (260)
T 1poi_B 80 WPNVRFVGFEINEYLHKANRLIAFIGGAQIDPYGNVN 116 (260)
T ss_dssp CCHHHHHHHHHHHHHHTCCCEEEEECCSEECTTCCEE
T ss_pred cCHHHHhcccchhhhhcCCccEEEeChHHhCCCCCcc
Confidence 5554433 3 33 6999999999999999988
No 27
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=82.63 E-value=12 Score=32.66 Aligned_cols=61 Identities=23% Similarity=0.227 Sum_probs=36.4
Q ss_pred HHHHHhCCCcE---EEE-cc-hH---HHHHhh--hccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEec
Q psy17541 569 LRRLVKHQVDC---SYV-LL-SA---VSYIMR--EVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 569 A~~L~~~GI~v---TyI-~D-SA---VsyiM~--~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~ 633 (717)
...+...|+++ +.. .. .. +..+.. ++|.|++|++.- |++-. -.|+..-.+ .++.++||+|+
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~~---~~~~~~~~Gs~~~~v-l~~~~~pVlvV 147 (147)
T 3hgm_A 76 KTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQGT---NGDKSLLLGSVAQRV-AGSAHCPVLVV 147 (147)
T ss_dssp HHHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSCT---TCCSCCCCCHHHHHH-HHHCSSCEEEC
T ss_pred HHHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCCC---ccccceeeccHHHHH-HhhCCCCEEEC
Confidence 44556689887 432 22 22 223333 699999999852 33333 257655544 45557999985
No 28
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=82.43 E-value=14 Score=41.61 Aligned_cols=148 Identities=16% Similarity=0.172 Sum_probs=85.0
Q ss_pred HHHHHHHHHhhc------cCCCeEEEecC---chHHHHHHHHH-HHcCCeeEE---EEcCCCCchhHHHHHHHHHhCCCc
Q psy17541 512 GNAICMFFHNKL------ANDDVILTYGC---SSLVEKILLTA-HEKGTKFRV---IIVDGSPWYEGKEMLRRLVKHQVD 578 (717)
Q Consensus 512 ~e~Ia~~A~e~I------~dGdvILTyg~---SStV~~vL~~A-~e~Gk~FrV---IVvESRP~~EGr~lA~~L~~~GI~ 578 (717)
.+.|+.+++++| .||.+| =+|- +.+|...|..- ...+..=++ -+.+ ....|.+.|.-
T Consensus 253 ~~~IA~~~a~~i~~~g~l~dG~~l-qlGiG~ip~aV~~~L~~~~~~l~i~se~g~~g~~~---------~~~~lieaG~i 322 (519)
T 2hj0_A 253 ELLIAEYAAKVITSSPYYKEGFSF-QTGTGGASLAVTRFMREQMIKDDIKANFALGGITN---------AMVELLEEGLV 322 (519)
T ss_dssp HHHHHHHHHHHHHTSTTCSTTCEE-ECCSSHHHHHHHHHHHHHHHHSCCCEEEECSEECH---------HHHHHHHTTSE
T ss_pred HHHHHHHHHHHHHhcccCCCCCEE-EeccChHHHHHHHHHhhhcccceeeeceeccCcCh---------hHHHHHHCCCC
Confidence 456777777775 999544 3444 44577777665 444443333 1111 23455566632
Q ss_pred E-E--------------------EEcchHHHH--------HhhhccEEEEceeeEecCCCeeccc-----------chHH
Q psy17541 579 C-S--------------------YVLLSAVSY--------IMREVSKVIIGAHALLSNGAVMSRA-----------GTAQ 618 (717)
Q Consensus 579 v-T--------------------yI~DSAVsy--------iM~~VdkVLLGAdaVlaNG~VvNKi-----------GT~~ 618 (717)
- . .+.+.+..| ++.+.|..|+||==|-.+|.|-+-. |..-
T Consensus 323 ~~~~~~~~f~~G~~~~~~~n~~~~~~~~~~~~~n~~n~p~~i~~ldv~ilga~eVD~~Gnvn~~~~~gg~~~~G~GG~~D 402 (519)
T 2hj0_A 323 DKILDVQDFDHPSAVSLDRNAEKHYEIDANMYASPLSKGSVINQLDICVLSALEVDTNFNVNVMTGSDGVIRGASGGHCD 402 (519)
T ss_dssp EEEEESEESSHHHHHHHHHTTTTEEECCHHHHHCSSSSCCGGGGCSEEEECCSEECTTCCEECSBCTTCCBCCBCTTHHH
T ss_pred CCCccccccccchHHHHHhCcHhhEEEchHHhhccCCCHHHhccCCeeeeeeEEEccCCceeeeeccCCeEecccccHHH
Confidence 2 1 233445556 5678999999998888888877665 2234
Q ss_pred HHHHHHhCCCcEEecccCCcccccccCCcccccccCCccccccccccccccccCCCccccccceeccCCCCccEEEeCCC
Q psy17541 619 VSLVARAFNVPVLAACETHKFCERVQTDALVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELA 698 (717)
Q Consensus 619 VALaAK~~~VPVyV~cEtyKFs~rv~~Ds~v~NEl~dP~EL~~~~~~l~~~~~~~~l~vlNp~FDvTPPeLIT~IITE~G 698 (717)
++.-|+. ++++.++.+ + +.+ .++ +.+ .+=.||-..|+.||||.|
T Consensus 403 ~~~gA~~----~ii~~~~t~-------g-------~~s-kiV------------~~~-----~~vtt~~~~V~~VVTE~G 446 (519)
T 2hj0_A 403 TAFAAKM----SLVISPLVR-------G-------RIP-TFV------------DKV-----NTVITPGTSVDVVVTEVG 446 (519)
T ss_dssp HHHHSSE----EEEECCSEE-------T-------TEE-SBC------------SSC-----SSCSBCGGGCCEEECSSC
T ss_pred HhhccCe----EEEEEcccC-------C-------CCC-eec------------cCC-----CCcccCCCCCCEEECCCE
Confidence 4444542 666666542 0 000 111 111 133466789999999999
Q ss_pred CcC-CCCh
Q psy17541 699 IVP-CTSV 705 (717)
Q Consensus 699 Ilp-PsSV 705 (717)
++. +...
T Consensus 447 va~~l~g~ 454 (519)
T 2hj0_A 447 IAINPNRP 454 (519)
T ss_dssp EEECTTCH
T ss_pred EEECCCCC
Confidence 998 6543
No 29
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=79.35 E-value=9.4 Score=38.62 Aligned_cols=101 Identities=12% Similarity=0.203 Sum_probs=58.6
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch------------HHHHHhh
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS------------AVSYIMR 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS------------AVsyiM~ 592 (717)
...+++|-|.+..+..++..+...|. +|++.+ |.+.|... .+...|+.+.++... .+-..+.
T Consensus 90 ~~~v~~~~g~~~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 163 (391)
T 4dq6_A 90 SEWLIYSPGVIPAISLLINELTKAND--KIMIQE--PVYSPFNS--VVKNNNRELIISPLQKLENGNYIMDYEDIENKIK 163 (391)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSCTTC--EEEECS--SCCTHHHH--HHHHTTCEEEECCCEECTTSCEECCHHHHHHHCT
T ss_pred HHHeEEcCChHHHHHHHHHHhCCCCC--EEEEcC--CCCHHHHH--HHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhh
Confidence 34678887777776666665543343 455543 77777433 334578877776532 3344444
Q ss_pred hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+ .++++=.+.-...|.++..---..|+-+|+.|++.+++
T Consensus 164 ~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (391)
T 4dq6_A 164 D-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIIS 202 (391)
T ss_dssp T-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred c-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEe
Confidence 4 33332222222345555544455677789999998886
No 30
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=78.82 E-value=16 Score=31.85 Aligned_cols=60 Identities=8% Similarity=0.109 Sum_probs=35.6
Q ss_pred HHHHhCCC-cEEEEc--chH---HHH-Hh--hhccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEec
Q psy17541 570 RRLVKHQV-DCSYVL--LSA---VSY-IM--REVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 570 ~~L~~~GI-~vTyI~--DSA---Vsy-iM--~~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~ 633 (717)
..+.+.|+ ++.... ... +.. +. .++|.|++|++.- |++-. -.|+..-.+ .++..+||+|+
T Consensus 76 ~~~~~~g~~~~~~~~~~g~~~~~I~~~~a~~~~~dliV~G~~~~---~~~~~~~~Gs~~~~v-l~~~~~pVlvV 145 (146)
T 3s3t_A 76 QFVATTSAPNLKTEISYGIPKHTIEDYAKQHPEIDLIVLGATGT---NSPHRVAVGSTTSYV-VDHAPCNVIVI 145 (146)
T ss_dssp HHHTTSSCCCCEEEEEEECHHHHHHHHHHHSTTCCEEEEESCCS---SCTTTCSSCHHHHHH-HHHCSSEEEEE
T ss_pred HHHHhcCCcceEEEEecCChHHHHHHHHHhhcCCCEEEECCCCC---CCcceEEEcchHHHH-hccCCCCEEEe
Confidence 34445788 766543 222 333 33 3699999999863 22322 256655544 45567999986
No 31
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=78.49 E-value=7 Score=39.13 Aligned_cols=109 Identities=14% Similarity=0.070 Sum_probs=70.4
Q ss_pred HHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCc------------------hhHHHHHHHHHhC-
Q psy17541 515 ICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPW------------------YEGKEMLRRLVKH- 575 (717)
Q Consensus 515 Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~------------------~EGr~lA~~L~~~- 575 (717)
++..+...+. +..||..|.+.+=..++..+...|.. ++.++|.... ..-..++++|.+.
T Consensus 21 ~g~~~q~~l~-~~~VlVvG~Gg~G~~va~~La~~Gv~-~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n 98 (249)
T 1jw9_B 21 FDFDGQEALK-DSRVLIVGLGGLGCAASQYLASAGVG-NLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN 98 (249)
T ss_dssp THHHHHHHHH-HCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred cCHHHHHHHh-CCeEEEEeeCHHHHHHHHHHHHcCCC-eEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC
Confidence 4455555554 36899999988766666666666743 5555665541 1123566677664
Q ss_pred -CCcEEEEc----chHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 576 -QVDCSYVL----LSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 576 -GI~vTyI~----DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
++.++.+. +..+..++.++|.||.+.|..- --+.+...|+.+++|++.++
T Consensus 99 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 99 PHIAITPVNALLDDAELAALIAEHDLVLDCTDNVA---------VRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHH---------HHHHHHHHHHHHTCCEEEEE
T ss_pred CCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHH---------HHHHHHHHHHHcCCCEEEee
Confidence 56666543 2345566789999998876542 23677788888999998763
No 32
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=78.14 E-value=9.4 Score=33.76 Aligned_cols=90 Identities=14% Similarity=0.081 Sum_probs=54.8
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHH-----hhhccEEEEc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYI-----MREVSKVIIG 600 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyi-----M~~VdkVLLG 600 (717)
+..|+..|++..=..+...+.+.| ++|+++|..|. .+..|.+.|+.+.+. |..-... +.++|.||+.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g--~~V~~id~~~~-----~~~~~~~~~~~~~~g-d~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG--KKVLAVDKSKE-----KIELLEDEGFDAVIA-DPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHH-----HHHHHHHTTCEEEEC-CTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECCHH-----HHHHHHHCCCcEEEC-CCCCHHHHHhCCcccCCEEEEe
Confidence 467899999876455555555555 46788887653 355667778765443 3322222 2456777664
Q ss_pred eeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.. +......+++.|+..+++.++
T Consensus 78 ~~---------~~~~n~~~~~~a~~~~~~~ii 100 (141)
T 3llv_A 78 GS---------DDEFNLKILKALRSVSDVYAI 100 (141)
T ss_dssp CS---------CHHHHHHHHHHHHHHCCCCEE
T ss_pred cC---------CHHHHHHHHHHHHHhCCceEE
Confidence 43 233456788888887755443
No 33
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.96 E-value=4.5 Score=38.78 Aligned_cols=98 Identities=14% Similarity=0.080 Sum_probs=59.7
Q ss_pred CCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCC-cEEEEcch--HHHHHhhhccEEEEc
Q psy17541 525 NDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQV-DCSYVLLS--AVSYIMREVSKVIIG 600 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI-~vTyI~DS--AVsyiM~~VdkVLLG 600 (717)
.|.+||+.|-|+-+-..|. .+.+.| ++|+++.-++.. +..|...|+ .+ +..|- .+...+..+|.||
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G--~~V~~~~R~~~~-----~~~~~~~~~~~~-~~~Dl~~~~~~~~~~~D~vi-- 89 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKG--HEPVAMVRNEEQ-----GPELRERGASDI-VVANLEEDFSHAFASIDAVV-- 89 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSGGG-----HHHHHHTTCSEE-EECCTTSCCGGGGTTCSEEE--
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCC--CeEEEEECChHH-----HHHHHhCCCceE-EEcccHHHHHHHHcCCCEEE--
Confidence 4678999998877655444 444555 467766544432 234555677 43 33342 2333344455554
Q ss_pred eeeEecCCCee-----------cccchHHHHHHHHhCCCcEEecccCC
Q psy17541 601 AHALLSNGAVM-----------SRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 601 AdaVlaNG~Vv-----------NKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
.+.++. |-.|+..+.-+|+..+++-+|...+|
T Consensus 90 -----~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~ 132 (236)
T 3e8x_A 90 -----FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV 132 (236)
T ss_dssp -----ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred -----ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 443433 77899999999999998877776664
No 34
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=77.58 E-value=13 Score=38.03 Aligned_cols=102 Identities=15% Similarity=0.154 Sum_probs=58.3
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch-------HHHHHhh-hcc
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-------AVSYIMR-EVS 595 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-------AVsyiM~-~Vd 595 (717)
....+++|-|.+..+..++......|. +|++. .|.+.|.. ..+...|+.+..+... .+..+-. +..
T Consensus 90 ~~~~v~~t~g~~~al~~~~~~l~~~gd--~vl~~--~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~ 163 (391)
T 3h14_A 90 DPGRVVITPGSSGGFLLAFTALFDSGD--RVGIG--APGYPSYR--QILRALGLVPVDLPTAPENRLQPVPADFAGLDLA 163 (391)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCTTC--EEEEE--ESCCHHHH--HHHHHTTCEEEEEECCGGGTTSCCHHHHTTSCCS
T ss_pred CHHHEEEecChHHHHHHHHHHhcCCCC--EEEEc--CCCCccHH--HHHHHcCCEEEEeecCcccCCCCCHHHHHhcCCe
Confidence 344678888877776666665544443 45543 36666643 3445679988888643 1222222 344
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.|++- ..--..|.++..---..++-+|+.|++.|++
T Consensus 164 ~v~i~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 199 (391)
T 3h14_A 164 GLMVA-SPANPTGTMLDHAAMGALIEAAQAQGASFIS 199 (391)
T ss_dssp EEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEC-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 55443 1112235444443345677789999998886
No 35
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=77.54 E-value=32 Score=31.04 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=57.8
Q ss_pred CeEEEecC-chHHHHHHHHHH----HcCCeeEEE-EcCCCCch------hHH----HHHHHHHhCCCcEEE---Ecc---
Q psy17541 527 DVILTYGC-SSLVEKILLTAH----EKGTKFRVI-IVDGSPWY------EGK----EMLRRLVKHQVDCSY---VLL--- 584 (717)
Q Consensus 527 dvILTyg~-SStV~~vL~~A~----e~Gk~FrVI-VvESRP~~------EGr----~lA~~L~~~GI~vTy---I~D--- 584 (717)
.+++-+.. |..-...|..|. ..+..+.++ |.+..+.. +++ .+...|.+.|+++.+ +..
T Consensus 26 ~ILv~vD~~s~~s~~al~~A~~la~~~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~v~~G~~ 105 (155)
T 3dlo_A 26 PIVVAVDKKSDRAERVLRFAAEEARLRGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKEGAEGEEHLLVRGKEP 105 (155)
T ss_dssp CEEEECCSSSHHHHHHHHHHHHHHHHHTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEESSSCH
T ss_pred eEEEEECCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhcCCCceEEEEecCCCH
Confidence 34555667 765455555443 346666655 55433211 122 334556678998775 322
Q ss_pred -hHHHHHhh--hccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEec
Q psy17541 585 -SAVSYIMR--EVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 585 -SAVsyiM~--~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~ 633 (717)
.++..+.. ++|.|++|++.-- .+-. -.|+..- -+.++..+||+|+
T Consensus 106 ~~~I~~~a~~~~~DLIV~G~~g~~---~~~~~~lGSv~~-~vl~~a~~PVLvV 154 (155)
T 3dlo_A 106 PDDIVDFADEVDAIAIVIGIRKRS---PTGKLIFGSVAR-DVILKANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHTTCSEEEEECCEEC---TTSCEECCHHHH-HHHHHCSSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCCCC---CCCCEEeccHHH-HHHHhCCCCEEEe
Confidence 22333334 6999999998752 2222 2566544 4455678999986
No 36
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=76.31 E-value=12 Score=34.63 Aligned_cols=86 Identities=9% Similarity=-0.014 Sum_probs=51.6
Q ss_pred CCeEEEecCchHHHHHHHHHHHc-CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH---HHHH--hhhccEEEE
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEK-GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA---VSYI--MREVSKVII 599 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~-Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA---Vsyi--M~~VdkVLL 599 (717)
++.|+.+|++.+=..+...+.+. | ++|+++|..|. .+..|.+.|+.+.+..... +..+ +.++|.||+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~~~-----~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--KISLGIEIREE-----AAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHH-----HHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECCHH-----HHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 66899999988766666666655 6 46777787653 2455677898765432111 2222 445666665
Q ss_pred ceeeEecCCCeecccchHHHHHHHHhCC
Q psy17541 600 GAHALLSNGAVMSRAGTAQVSLVARAFN 627 (717)
Q Consensus 600 GAdaVlaNG~VvNKiGT~~VALaAK~~~ 627 (717)
-.. +......++..++..+
T Consensus 112 ~~~---------~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 112 AMP---------HHQGNQTALEQLQRRN 130 (183)
T ss_dssp CCS---------SHHHHHHHHHHHHHTT
T ss_pred eCC---------ChHHHHHHHHHHHHHC
Confidence 432 1223455666777776
No 37
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=76.26 E-value=12 Score=34.28 Aligned_cols=100 Identities=17% Similarity=0.072 Sum_probs=61.2
Q ss_pred ccCCCeEEEecCch-------HHHHHHHHHH--HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE----EcchHHHH
Q psy17541 523 LANDDVILTYGCSS-------LVEKILLTAH--EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY----VLLSAVSY 589 (717)
Q Consensus 523 I~dGdvILTyg~SS-------tV~~vL~~A~--e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy----I~DSAVsy 589 (717)
+.++.+|+..|+-. .+..++.... +.+..++++++-..+...-..+...+.+.| .+++ +....+..
T Consensus 33 ~~~~~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~ 111 (200)
T 2bfw_A 33 MDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRE 111 (200)
T ss_dssp CCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHH
T ss_pred CCCCCEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHH
Confidence 44555777777644 2334444443 444578888887655212233444555666 7777 33457899
Q ss_pred HhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 590 IMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 590 iM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
+|..+|.+|+-... .| .| ...+=|-.+|+||++.
T Consensus 112 ~~~~ad~~l~ps~~---e~-----~~--~~~~Ea~a~G~PvI~~ 145 (200)
T 2bfw_A 112 LYGSVDFVIIPSYF---EP-----FG--LVALEAMCLGAIPIAS 145 (200)
T ss_dssp HHTTCSEEEECCSC---CS-----SC--HHHHHHHHTTCEEEEE
T ss_pred HHHHCCEEEECCCC---CC-----cc--HHHHHHHHCCCCEEEe
Confidence 99999999885432 22 13 3456777889998874
No 38
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=74.90 E-value=34 Score=32.93 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=26.4
Q ss_pred hhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 591 MREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 591 M~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
+..=|.||+ |...|.. .-+..++-.||..|+|+++++..
T Consensus 112 ~~~~Dvvi~----iS~SG~t---~~~~~~~~~ak~~g~~vi~iT~~ 150 (201)
T 3trj_A 112 GNEDDILLV----ITTSGDS---ENILSAVEEAHDLEMKVIALTGG 150 (201)
T ss_dssp CCTTCEEEE----ECSSSCC---HHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCCCEEEE----EeCCCCC---HHHHHHHHHHHHCCCcEEEEECC
Confidence 455666654 3345543 33667788999999999998754
No 39
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=74.51 E-value=20 Score=36.70 Aligned_cols=100 Identities=14% Similarity=0.172 Sum_probs=53.3
Q ss_pred CCeEEEecCchHHHHHHHHHH------HcCCeeEEEEcCCCCchhHH-HHHHHHHhC---CCcEEEEc-chHHHHHhh-h
Q psy17541 526 DDVILTYGCSSLVEKILLTAH------EKGTKFRVIIVDGSPWYEGK-EMLRRLVKH---QVDCSYVL-LSAVSYIMR-E 593 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~------e~Gk~FrVIVvESRP~~EGr-~lA~~L~~~---GI~vTyI~-DSAVsyiM~-~ 593 (717)
..+++|-|.+..+..+|..+. ..|. +|++++ .+.+.+. ..+..+... |+.+.++. ...+-..+. +
T Consensus 89 ~~v~~~~g~t~al~~al~~~~~~~~~~~~gd--~vii~~-~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~l~~~i~~~ 165 (416)
T 1qz9_A 89 GEVVVTDTTSINLFKVLSAALRVQATRSPER--RVIVTE-TSNFPTDLYIAEGLADMLQQGYTLRLVDSPEELPQAIDQD 165 (416)
T ss_dssp TSEEECSCHHHHHHHHHHHHHHHHHHHSTTC--CEEEEE-TTSCHHHHHHHHHHHHHHCSSCEEEEESSGGGHHHHCSTT
T ss_pred ccEEEeCChhHHHHHHHHhhcccccccCCCC--cEEEEc-CCCCCchHHHHHHHHHHhcCCceEEEeCcHHHHHHHhCCC
Confidence 467777666655555555443 3443 345443 3344332 222233332 99888886 344444444 3
Q ss_pred ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 594 VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 594 VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+..|++ .+.-...|.++. --.|+-+|+++|++|+|
T Consensus 166 ~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 200 (416)
T 1qz9_A 166 TAVVML-THVNYKTGYMHD---MQALTALSHECGALAIW 200 (416)
T ss_dssp EEEEEE-ESBCTTTCBBCC---HHHHHHHHHHHTCEEEE
T ss_pred ceEEEE-eccccCcccccC---HHHHHHHHHHcCCEEEE
Confidence 333333 222223355544 36677889999998876
No 40
>3rrl_A Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori}
Probab=74.24 E-value=8.3 Score=39.05 Aligned_cols=22 Identities=18% Similarity=0.015 Sum_probs=19.3
Q ss_pred hccEEEEceeeEecCCCeeccc
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRA 614 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKi 614 (717)
.+|..|+.|...-.+|.+.-..
T Consensus 151 ~~DvAli~a~~aD~~GN~~~~~ 172 (235)
T 3rrl_A 151 TGDYGLIKAYKSDTLGNLVFRK 172 (235)
T ss_dssp CEEEEEEECSEEETTCCEECCG
T ss_pred CCeEEEEEeeecCCCceEEEec
Confidence 6899999999999999988654
No 41
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=74.02 E-value=8.2 Score=36.45 Aligned_cols=100 Identities=12% Similarity=0.039 Sum_probs=60.1
Q ss_pred eEEEecCchHHHHHHHHHH-HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--c--hHHHHHhhhccEEEEcee
Q psy17541 528 VILTYGCSSLVEKILLTAH-EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--L--SAVSYIMREVSKVIIGAH 602 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~-e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--D--SAVsyiM~~VdkVLLGAd 602 (717)
.||+.|-++.+-..|.... +.| ++|+++.-++...- .+ .++.+...- | ..+..++.++|.||.-|-
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~-----~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag 72 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTD--YQIYAGARKVEQVP-----QY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSG 72 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSS--CEEEEEESSGGGSC-----CC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCC--CEEEEEECCccchh-----hc--CCceEEEecccCCHHHHHHHHcCCCEEEECCc
Confidence 5788887777666555443 444 67777665442211 01 333332221 2 345666777888876664
Q ss_pred eEecCCCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 603 ALLSNGAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 603 aVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
....+-.-+|-.|+..+.-+|+..+++-+|...+
T Consensus 73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 73 SGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp CTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 4433334468899999999999999876654444
No 42
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=73.45 E-value=68 Score=32.48 Aligned_cols=99 Identities=13% Similarity=0.139 Sum_probs=55.3
Q ss_pred CCeEEEecCchHHHHHHHHH----HHcCCeeEEEEcCCCCchhHHH--HHHHHHhCCCcEEEEcc--------hHHHHHh
Q psy17541 526 DDVILTYGCSSLVEKILLTA----HEKGTKFRVIIVDGSPWYEGKE--MLRRLVKHQVDCSYVLL--------SAVSYIM 591 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A----~e~Gk~FrVIVvESRP~~EGr~--lA~~L~~~GI~vTyI~D--------SAVsyiM 591 (717)
..+++|.|.+..+..++..+ ...| -+|++. .|.+.|.. +...+...|+.+.++.. ..+-..+
T Consensus 91 ~~v~~~~g~t~a~~~~~~~~~~~~~~~g--d~Vl~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l 166 (420)
T 1t3i_A 91 REIVYTRNATEAINLVAYSWGMNNLKAG--DEIITT--VMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLL 166 (420)
T ss_dssp GGEEEESSHHHHHHHHHHHTHHHHCCTT--CEEEEE--TTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHHHHHC
T ss_pred CeEEEcCChHHHHHHHHHHhhhcccCCC--CEEEEC--cchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHHHHhh
Confidence 45788877777766666655 2333 255554 35565532 22233356888887763 2233333
Q ss_pred h-hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 592 R-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 592 ~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
. ++..|++ .+.-...|.++. --.|+-+|++|+++|+|
T Consensus 167 ~~~~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 204 (420)
T 1t3i_A 167 SEKTKLVTV-VHISNTLGCVNP---AEEIAQLAHQAGAKVLV 204 (420)
T ss_dssp CTTEEEEEE-ESBCTTTCBBCC---HHHHHHHHHHTTCEEEE
T ss_pred CCCceEEEE-eCCcccccCcCC---HHHHHHHHHHcCCEEEE
Confidence 3 3333333 222223455555 36678889999998876
No 43
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=73.41 E-value=6.8 Score=34.01 Aligned_cols=61 Identities=15% Similarity=0.127 Sum_probs=36.0
Q ss_pred HHHHHhCCCcEEEEcc-----hHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 569 LRRLVKHQVDCSYVLL-----SAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 569 A~~L~~~GI~vTyI~D-----SAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
...|...|+++..... .++..+..++|.|++|++.- |++-...|+..-.+ .++..+||+|+
T Consensus 72 ~~~~~~~g~~~~~~v~~g~~~~~I~~~a~~~dliV~G~~~~---~~~~~~~Gs~~~~v-l~~~~~pVlvv 137 (138)
T 3idf_A 72 STFFTEKGINPFVVIKEGEPVEMVLEEAKDYNLLIIGSSEN---SFLNKIFASHQDDF-IQKAPIPVLIV 137 (138)
T ss_dssp HHHHHTTTCCCEEEEEESCHHHHHHHHHTTCSEEEEECCTT---STTSSCCCCTTCHH-HHHCSSCEEEE
T ss_pred HHHHHHCCCCeEEEEecCChHHHHHHHHhcCCEEEEeCCCc---chHHHHhCcHHHHH-HhcCCCCEEEe
Confidence 3445567888765432 22333334899999999753 33322236544444 45567999985
No 44
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=73.40 E-value=45 Score=28.83 Aligned_cols=37 Identities=27% Similarity=0.429 Sum_probs=24.6
Q ss_pred hccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEec
Q psy17541 593 EVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~ 633 (717)
++|.|++|++.- |++-. -.|+..-.++ ++.++||+|+
T Consensus 99 ~~dliV~G~~~~---~~~~~~~~Gs~~~~vl-~~~~~pVlvv 136 (137)
T 2z08_A 99 KADLIVMGTRGL---GALGSLFLGSQSQRVV-AEAPCPVLLV 136 (137)
T ss_dssp TCSEEEEESSCT---TCCSCSSSCHHHHHHH-HHCSSCEEEE
T ss_pred CCCEEEECCCCC---chhhhhhhccHHHHHH-hcCCCCEEEe
Confidence 699999999853 22222 2576554444 4568999986
No 45
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=73.31 E-value=7.2 Score=42.24 Aligned_cols=94 Identities=11% Similarity=0.115 Sum_probs=62.3
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHH-----hhhccEEEE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYI-----MREVSKVII 599 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyi-----M~~VdkVLL 599 (717)
.++.|+..|++++-..+...+.+.| +.|+|+|..|. .+..|.+.|+++.+- |..=..+ +.+++.||+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~~-----~v~~~~~~g~~vi~G-Dat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDPD-----HIETLRKFGMKVFYG-DATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCHH-----HHHHHHHTTCCCEES-CTTCHHHHHHTTTTTCSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCHH-----HHHHHHhCCCeEEEc-CCCCHHHHHhcCCCccCEEEE
Confidence 3567999999987666666666555 57888888764 456777889987554 4332222 346788877
Q ss_pred ceeeEecCCCeecccchHHHHHHHHhCCC--cEEeccc
Q psy17541 600 GAHALLSNGAVMSRAGTAQVSLVARAFNV--PVLAACE 635 (717)
Q Consensus 600 GAdaVlaNG~VvNKiGT~~VALaAK~~~V--PVyV~cE 635 (717)
..+ +..-+..+++.|+.++. ++++-+.
T Consensus 75 ~~~---------~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 75 AID---------DPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CCS---------SHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCC---------ChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 654 24556788899999875 4555443
No 46
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=72.33 E-value=29 Score=34.77 Aligned_cols=97 Identities=14% Similarity=0.166 Sum_probs=58.0
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHh---hhccE
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIM---REVSK 596 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM---~~Vdk 596 (717)
+++|.|.+..+..+|..+...|. +|++. .|.+.|..+...+...|+.+.++.. ..+-..+ +++..
T Consensus 74 v~~~~g~t~a~~~~~~~l~~~gd--~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~ 149 (386)
T 2dr1_A 74 LLVPSSGTGIMEASIRNGVSKGG--KVLVT--IIGAFGKRYKEVVESNGRKAVVLEYEPGKAVKPEDLDDALRKNPDVEA 149 (386)
T ss_dssp EEESSCHHHHHHHHHHHHSCTTC--EEEEE--ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHCTTCCE
T ss_pred EEEeCChHHHHHHHHHHhhcCCC--eEEEE--cCCchhHHHHHHHHHhCCceEEEecCCCCCCCHHHHHHHHhcCCCCcE
Confidence 66677777776666665544343 55554 4667664455556668988877753 2333344 24555
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++- +.-...|.+.. --.|+-+|++||++|++
T Consensus 150 v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 181 (386)
T 2dr1_A 150 VTIT-YNETSTGVLNP---LPELAKVAKEHDKLVFV 181 (386)
T ss_dssp EEEE-SEETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred EEEE-eecCCcchhCC---HHHHHHHHHHcCCeEEE
Confidence 5554 33333455543 36778889999998876
No 47
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=72.32 E-value=66 Score=32.04 Aligned_cols=99 Identities=16% Similarity=0.180 Sum_probs=58.1
Q ss_pred CCeEEEecCchHHHHHHHHHH----HcCCeeEEEEcCCCCchhHH-HHHHHHHhCCCcEEEEcc--------hHHHHHhh
Q psy17541 526 DDVILTYGCSSLVEKILLTAH----EKGTKFRVIIVDGSPWYEGK-EMLRRLVKHQVDCSYVLL--------SAVSYIMR 592 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~----e~Gk~FrVIVvESRP~~EGr-~lA~~L~~~GI~vTyI~D--------SAVsyiM~ 592 (717)
..+++|-|.+..+..++..+. ..|. +|++. .|.+.|. ..+..+...|+.+..+.. ..+-..+.
T Consensus 62 ~~v~~~~g~t~a~~~~~~~~~~~~~~~gd--~vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 137 (384)
T 1eg5_A 62 SEIFFTSCATESINWILKTVAETFEKRKR--TIITT--PIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVD 137 (384)
T ss_dssp GGEEEESCHHHHHHHHHHHHHHHTTTTCC--EEEEC--TTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCC
T ss_pred CeEEEECCHHHHHHHHHHhhhhhccCCCC--EEEEC--CCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhC
Confidence 467888777777666666554 2343 45553 4566664 445556778998887753 12333332
Q ss_pred -hccEEEEceeeEecCCCeecccchHHHHHHHHhCC--CcEEe
Q psy17541 593 -EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFN--VPVLA 632 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~--VPVyV 632 (717)
++..|++ .+.-...|.++.. ..|+-+|+.++ ++|++
T Consensus 138 ~~~~~v~~-~~~~nptG~~~~~---~~i~~l~~~~~~~~~li~ 176 (384)
T 1eg5_A 138 EDTFLVSI-MAANNEVGTIQPV---EDVTRIVKKKNKETLVHV 176 (384)
T ss_dssp TTEEEEEE-ESBCTTTCBBCCH---HHHHHHHHHHCTTCEEEE
T ss_pred CCCeEEEE-ECCCCCcccccCH---HHHHHHHHhcCCceEEEE
Confidence 3344444 2322334666652 56777889999 76665
No 48
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=70.60 E-value=5.2 Score=41.43 Aligned_cols=105 Identities=16% Similarity=0.213 Sum_probs=72.9
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHAL 604 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaV 604 (717)
+-|+++.+-....+..++..|.+.|.+.-|++.+.-|..+-..+.+...+.|+ .++-.|.++.+-+...+..+....+
T Consensus 70 ~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi--~viGPNc~Gii~~~~~~~~~~~~~~ 147 (294)
T 2yv1_A 70 DANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHIPVHDTMEFVNYAEDVGV--KIIGPNTPGIASPKVGKLGIIPMEV 147 (294)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTC--EEECSSCCEEEETTTEEEECCCGGG
T ss_pred CCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEcCCCceeeccCcceeeecccCC
Confidence 45888888888899999999999888766667777666555677777777887 4565666665555443333322223
Q ss_pred ecCC--CeecccchHHHHHH--HHhCCCcEE
Q psy17541 605 LSNG--AVMSRAGTAQVSLV--ARAFNVPVL 631 (717)
Q Consensus 605 laNG--~VvNKiGT~~VALa--AK~~~VPVy 631 (717)
..-| +++++.|++..+++ +...++.|-
T Consensus 148 ~~~G~va~vSqSG~l~~~~~~~~~~~g~G~s 178 (294)
T 2yv1_A 148 LKEGSVGMVSRSGTLTYEIAHQIKKAGFGVS 178 (294)
T ss_dssp CCEEEEEEEESCSHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCeE
Confidence 3334 68999999988874 556777765
No 49
>3rrl_B Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori} PDB: 3cdk_B
Probab=70.58 E-value=3.4 Score=41.21 Aligned_cols=94 Identities=19% Similarity=0.202 Sum_probs=56.5
Q ss_pred HHHHHHHHHhhccCCCeEE-EecCchHHHHHHHHHHHcCCeeEEEEcCCCCch------hHHHHHHHHHhCCC------c
Q psy17541 512 GNAICMFFHNKLANDDVIL-TYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWY------EGKEMLRRLVKHQV------D 578 (717)
Q Consensus 512 ~e~Ia~~A~e~I~dGdvIL-Tyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~------EGr~lA~~L~~~GI------~ 578 (717)
++.|+..++..|+||++|- =+|-...|-.++. ++.+. +..|+-... +|.. -..|...|- +
T Consensus 2 r~~Ia~raA~el~dG~~vnlGIGiP~~va~~~~-----~~~v~-l~~E~G~~g~~p~p~~~~~-d~~~in~G~~~~t~~~ 74 (207)
T 3rrl_B 2 REAIIKRAAKELKEGMYVNLGIGLPTLVANEVS-----GMNIV-FQSENGLLGIGAYPLEGSV-DADLINAGKETITVVP 74 (207)
T ss_dssp HHHHHHHHHTTCCTTCEEEECTTGGGGGGGGGS-----SSCCE-EEETTTEEEECCCCCTTCC-CTTCBCTTSBBCCEEE
T ss_pred hHHHHHHHHHhCCCCCEEEECCChHHHHHHhcc-----CCcEE-EEeccceecCcCCCCcccc-CHhHeecCCceeeecC
Confidence 5679999999999998654 3565555555554 44443 344443222 1111 122333442 2
Q ss_pred EEEEcchHHHHH-hh--hccEEEEceeeEecCCCeec
Q psy17541 579 CSYVLLSAVSYI-MR--EVSKVIIGAHALLSNGAVMS 612 (717)
Q Consensus 579 vTyI~DSAVsyi-M~--~VdkVLLGAdaVlaNG~VvN 612 (717)
-.-+.|++-++- ++ .+|..|+||--|-.+|.+-+
T Consensus 75 ~~~~~~~~~~F~~~~gG~~Dvailga~qVD~~Gnvn~ 111 (207)
T 3rrl_B 75 GASFFNSADSFAMIRGGHIDLAILGGMEVSQNGDLAN 111 (207)
T ss_dssp EEEECCHHHHHHHHHTTCCSEEEECCSEEETTSCEEC
T ss_pred CceeeCCHHHHHHHhCCCeeEEEECHHHHCcCCCccc
Confidence 233556554443 44 59999999999999998864
No 50
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=70.45 E-value=19 Score=36.22 Aligned_cols=101 Identities=12% Similarity=0.181 Sum_probs=58.4
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-----------hHHHHHh-h
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-----------SAVSYIM-R 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-----------SAVsyiM-~ 592 (717)
...+++|-|.+..+..++..+...|. +|++.+ |.+.|.. ..+...|+.+..+.. ..+-..+ +
T Consensus 82 ~~~v~~~~g~~~a~~~~~~~l~~~gd--~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 155 (383)
T 3kax_A 82 KEWIVFSAGIVPALSTSIQAFTKENE--SVLVQP--PIYPPFF--EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQ 155 (383)
T ss_dssp GGGEEEESCHHHHHHHHHHHHCCTTC--EEEECS--SCCHHHH--HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTT
T ss_pred hhhEEEcCCHHHHHHHHHHHhCCCCC--EEEEcC--CCcHHHH--HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCc
Confidence 34678888777776666666544443 455543 6666643 334457877766542 2333333 3
Q ss_pred hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++..|++ .+.--..|.++..---..++-+|+.|++.+++
T Consensus 156 ~~~~v~i-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 194 (383)
T 3kax_A 156 GVKLMLL-CSPHNPIGRVWKKEELTKLGSLCTKYNVIVVA 194 (383)
T ss_dssp TCCEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEE-eCCCCCCCcCcCHHHHHHHHHHHHHCCCEEEE
Confidence 5666665 33333345555444344566669999998887
No 51
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=69.84 E-value=39 Score=29.20 Aligned_cols=36 Identities=25% Similarity=0.362 Sum_probs=24.6
Q ss_pred hccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEec
Q psy17541 593 EVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~ 633 (717)
++|.|++|++. +| +-. -.|+..-. +.++.++||+|+
T Consensus 106 ~~dliV~G~~~---~~-~~~~~~Gs~~~~-v~~~~~~pVlvv 142 (143)
T 3fdx_A 106 PADLVIIASHR---PD-ITTYLLGSNAAA-VVRHAECSVLVV 142 (143)
T ss_dssp TCSEEEEESSC---TT-CCSCSSCHHHHH-HHHHCSSEEEEE
T ss_pred CCCEEEEeCCC---CC-CeeeeeccHHHH-HHHhCCCCEEEe
Confidence 69999999983 33 332 35665444 455678999986
No 52
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=69.19 E-value=22 Score=35.69 Aligned_cols=102 Identities=12% Similarity=0.070 Sum_probs=57.7
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc------hHHHHHhh-hccE
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL------SAVSYIMR-EVSK 596 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D------SAVsyiM~-~Vdk 596 (717)
....+++|-|.+..+..++..+...|. +|++.+ |.+.|.. ..+...|+.+.+++. ..+-..+. +...
T Consensus 80 ~~~~i~~t~g~~~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~d~~~l~~~l~~~~~~ 153 (377)
T 3fdb_A 80 RPEWIFPIPDVVRGLYIAIDHFTPAQS--KVIVPT--PAYPPFF--HLLSATQREGIFIDATGGINLHDVEKGFQAGARS 153 (377)
T ss_dssp CGGGEEEESCHHHHHHHHHHHHSCTTC--CEEEEE--SCCTHHH--HHHHHHTCCEEEEECTTSCCHHHHHHHHHTTCCE
T ss_pred CHHHEEEeCChHHHHHHHHHHhcCCCC--EEEEcC--CCcHhHH--HHHHHcCCEEEEccCCCCCCHHHHHHHhccCCCE
Confidence 344678887777776666665544443 455433 6666643 234446888888863 23444443 3444
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++-. .--..|.++..---..++-+|+.|+++|++
T Consensus 154 v~i~~-p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 188 (377)
T 3fdb_A 154 ILLCN-PYNPLGMVFAPEWLNELCDLAHRYDARVLV 188 (377)
T ss_dssp EEEES-SBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEeC-CCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 44332 222235444443444566678999998886
No 53
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=69.12 E-value=18 Score=35.66 Aligned_cols=103 Identities=9% Similarity=0.018 Sum_probs=60.0
Q ss_pred CCeEEEecCchHHHHHH-HHHHHcCCeeEEEEcCCCCc---hhHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEE
Q psy17541 526 DDVILTYGCSSLVEKIL-LTAHEKGTKFRVIIVDGSPW---YEGKEMLRRLVKHQVDCSYVL--L-SAVSYIMREVSKVI 598 (717)
Q Consensus 526 GdvILTyg~SStV~~vL-~~A~e~Gk~FrVIVvESRP~---~EGr~lA~~L~~~GI~vTyI~--D-SAVsyiM~~VdkVL 598 (717)
..+||+.|-+..+-..| ..+.+.| ++|+++.-++. .+....+..|...|+.+...- | .++..++..+|.||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLG--HPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC--CcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 35688888765544433 3344456 45666544332 122233445656676544322 2 35667777777777
Q ss_pred EceeeEecCCCeecccchHHHHHHHHhCC-CcEEec
Q psy17541 599 IGAHALLSNGAVMSRAGTAQVSLVARAFN-VPVLAA 633 (717)
Q Consensus 599 LGAdaVlaNG~VvNKiGT~~VALaAK~~~-VPVyV~ 633 (717)
.-|-.... -.|-.|+..++-+|+..+ ++-+|.
T Consensus 82 ~~a~~~~~---~~~~~~~~~l~~aa~~~g~v~~~v~ 114 (313)
T 1qyd_A 82 SALAGGVL---SHHILEQLKLVEAIKEAGNIKRFLP 114 (313)
T ss_dssp ECCCCSSS---STTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred ECCccccc---hhhHHHHHHHHHHHHhcCCCceEEe
Confidence 65432111 126778999999999998 888874
No 54
>1k6d_A Acetate COA-transferase alpha subunit; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: c.124.1.2
Probab=68.96 E-value=15 Score=36.43 Aligned_cols=43 Identities=19% Similarity=0.259 Sum_probs=28.3
Q ss_pred hccEEEEceeeEecCCCeeccc--c--hHHHHHHHHhCCCcEEecccCCcccc
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRA--G--TAQVSLVARAFNVPVLAACETHKFCE 641 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKi--G--T~~VALaAK~~~VPVyV~cEtyKFs~ 641 (717)
.+|..|+-|...-.+|.+.-.. + +..+|++|+ +|++|.-+..+
T Consensus 148 ~~DVAli~a~~aD~~Gn~~~~~~~~~~~~~~a~aA~------~VIveVn~~vp 194 (220)
T 1k6d_A 148 RADLALIRAHRCDTLGNLTYQLSARNFNPLIALAAD------ITLVEPDELVE 194 (220)
T ss_dssp CEEEEEEEEEEEETTCCEECCHHHHTTHHHHHHHEE------EEEEEEEEEEC
T ss_pred CCcEEEEEeecCCCCceEEEecCCccccHHHHHhcC------EEEEEEccccC
Confidence 5899999999999999987653 2 223455554 45555444433
No 55
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=68.83 E-value=24 Score=35.53 Aligned_cols=101 Identities=10% Similarity=0.137 Sum_probs=59.0
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-----------SAVSYIMR- 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-----------SAVsyiM~- 592 (717)
...+++|-|.+..+..++..+...|. +|++. .|.+.|.. ..+...|+.+..+.. ..+-..+.
T Consensus 85 ~~~i~~~~g~~~a~~~~~~~l~~~gd--~vl~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 158 (391)
T 3dzz_A 85 EDWCVFASGVVPAISAMVRQFTSPGD--QILVQ--EPVYNMFY--SVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT 158 (391)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSCTTC--EEEEC--SSCCHHHH--HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS
T ss_pred HHHEEECCCHHHHHHHHHHHhCCCCC--eEEEC--CCCcHHHH--HHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc
Confidence 34577777777776666666543343 45543 36666632 334457877766543 23444443
Q ss_pred -hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 -EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+...|++ .+.--..|.+++.---..|+-+|+.||++|++
T Consensus 159 ~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (391)
T 3dzz_A 159 PSVRMMVF-CNPHNPIGYAWSEEEVKRIAELCAKHQVLLIS 198 (391)
T ss_dssp TTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCceEEEE-ECCCCCCCcccCHHHHHHHHHHHHHCCCEEEE
Confidence 4555544 33333456565555556677789999998887
No 56
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=68.55 E-value=17 Score=33.07 Aligned_cols=42 Identities=19% Similarity=0.313 Sum_probs=24.7
Q ss_pred hccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEecccCCc
Q psy17541 593 EVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAACETHK 638 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~cEtyK 638 (717)
++|+|++|++.- |++-. -.|+..-.++ ++..+||+|+-..++
T Consensus 124 ~~DLIVmG~~g~---~~~~~~~~Gsva~~vl-~~a~~pVlvv~~~~~ 166 (175)
T 2gm3_A 124 RPDFLVVGSRGL---GRFQKVFVGTVSAFCV-KHAECPVMTIKRNAD 166 (175)
T ss_dssp CCSEEEEEECCC---C--------CHHHHHH-HHCSSCEEEEECCGG
T ss_pred CCCEEEEeCCCC---ChhhhhhcCchHHHHH-hCCCCCEEEEcCCcC
Confidence 599999999863 22222 2566554444 445799999865543
No 57
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=68.50 E-value=29 Score=35.09 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=55.6
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMR--EVSK 596 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~--~Vdk 596 (717)
.+++|.|-+..+..++..+...|. +|++.+ |.+.|......+...|+.+.++.. ..+-..+. ++..
T Consensus 72 ~i~~~~g~t~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 147 (393)
T 2huf_A 72 TFCLSASGHGGMEATLCNLLEDGD--VILIGH--TGHWGDRSADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSV 147 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTC--EEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSE
T ss_pred EEEEcCcHHHHHHHHHHHHhCCCC--EEEEEC--CCcchHHHHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcE
Confidence 366777777776666665544343 566654 445453334445567988888752 12333333 3555
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++- +.--..|.++. -..|+-+|+.++++|+|
T Consensus 148 v~~~-~~~nptG~~~~---l~~i~~~~~~~~~~li~ 179 (393)
T 2huf_A 148 LFLT-QGDSSTGVLQG---LEGVGALCHQHNCLLIV 179 (393)
T ss_dssp EEEE-SEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEEE-ccCCCccccCC---HHHHHHHHHHcCCEEEE
Confidence 5552 32223455544 24577788999998876
No 58
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=68.43 E-value=16 Score=36.19 Aligned_cols=102 Identities=11% Similarity=0.008 Sum_probs=59.3
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch-------HHHHHhhh----
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-------AVSYIMRE---- 593 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-------AVsyiM~~---- 593 (717)
...+++|.|-+..+..+|..+...|. +|++. .|.+.+...+..+...|+++..+... .+-..+.+
T Consensus 66 ~~~v~~~~g~t~a~~~~~~~~~~~gd--~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~ 141 (359)
T 1svv_A 66 DADVHFISGGTQTNLIACSLALRPWE--AVIAT--QLGHISTHETGAIEATGHKVVTAPCPDGKLRVADIESALHENRSE 141 (359)
T ss_dssp TSEEEEESCHHHHHHHHHHHHCCTTE--EEEEE--TTSHHHHSSTTHHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCST
T ss_pred CccEEEeCCchHHHHHHHHHHhCCCC--EEEEc--ccchHHHHHHHHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhc
Confidence 34577888888887777776643332 55553 46666643322355679998888743 33334433
Q ss_pred ----ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 594 ----VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 594 ----VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+..|++- . ....|.++..-=-..++-+|+.||+.++|
T Consensus 142 ~~~~~~~v~~~-~-~~ptG~~~~~~~l~~i~~~~~~~~~~li~ 182 (359)
T 1svv_A 142 HMVIPKLVYIS-N-TTEVGTQYTKQELEDISASCKEHGLYLFL 182 (359)
T ss_dssp TSCEEEEEEEE-S-SCTTSCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCceEEEEE-c-CCCCceecCHHHHHHHHHHHHHhCCEEEE
Confidence 3445453 2 23336555531123467788999998876
No 59
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=68.37 E-value=24 Score=35.67 Aligned_cols=97 Identities=18% Similarity=0.185 Sum_probs=57.6
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c-hHHHHHhh-hccEEEEce
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L-SAVSYIMR-EVSKVIIGA 601 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D-SAVsyiM~-~VdkVLLGA 601 (717)
...+++|.|.+..+..++..+...|. +|++.+ |.+.|...+ +...|+.+..+. | ..+-..+. ++..|++ .
T Consensus 89 ~~~v~~~~g~~~a~~~~~~~~~~~gd--~vl~~~--p~~~~~~~~--~~~~g~~~~~v~~d~~~l~~~l~~~~~~v~~-~ 161 (370)
T 2z61_A 89 PDNIIITGGSSLGLFFALSSIIDDGD--EVLIQN--PCYPCYKNF--IRFLGAKPVFCDFTVESLEEALSDKTKAIII-N 161 (370)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCCTTC--EEEEES--SCCTHHHHH--HHHTTCEEEEECSSHHHHHHHCCSSEEEEEE-E
T ss_pred hhhEEECCChHHHHHHHHHHhcCCCC--EEEEeC--CCchhHHHH--HHHcCCEEEEeCCCHHHHHHhcccCceEEEE-c
Confidence 34678888877777666666543343 455543 666664333 445798888875 2 23333333 3444554 2
Q ss_pred eeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 602 HALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 602 daVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.---..|.++..- |+-+|+.|++.+++
T Consensus 162 ~p~nptG~~~~~~----l~~~~~~~~~~li~ 188 (370)
T 2z61_A 162 SPSNPLGEVIDRE----IYEFAYENIPYIIS 188 (370)
T ss_dssp SSCTTTCCCCCHH----HHHHHHHHCSEEEE
T ss_pred CCCCCcCcccCHH----HHHHHHHcCCEEEE
Confidence 2222346666655 78888999988776
No 60
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=68.29 E-value=5.6 Score=43.99 Aligned_cols=106 Identities=11% Similarity=0.071 Sum_probs=47.5
Q ss_pred HHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHH----------
Q psy17541 518 FFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAV---------- 587 (717)
Q Consensus 518 ~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAV---------- 587 (717)
.+...|..||+++..|....+..+..........-+|+|+-. +.-|+.+++.|.+.|+++++|-.+.-
T Consensus 315 ~~~~~l~~GD~L~v~g~~~~l~~~~~~~~~~~~~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~i~ 392 (565)
T 4gx0_A 315 QRETVLTEQSLLVLAGTKSQLAALEYLIGEAPEDELIFIIGH--GRIGCAAAAFLDRKPVPFILIDRQESPVCNDHVVVY 392 (565)
T ss_dssp --------------------------------CCCCEEEECC--SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSSCEEE
T ss_pred CCCcEeCCCCEEEEEeCHHHHHHHHHHhcCCCCCCCEEEECC--CHHHHHHHHHHHHCCCCEEEEECChHHHhhcCCEEE
Confidence 445568889999999988776665443322111156777655 44578999999999999999873321
Q ss_pred ----------HHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 588 ----------SYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 588 ----------syiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
..=+.++|.|++..+. ..=+..+++.||..+.++.|++
T Consensus 393 gD~t~~~~L~~agi~~ad~vi~~~~~---------d~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 393 GDATVGQTLRQAGIDRASGIIVTTND---------DSTNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp SCSSSSTHHHHHTTTSCSEEEECCSC---------HHHHHHHHHHHHHHCSSSEEEE
T ss_pred eCCCCHHHHHhcCccccCEEEEECCC---------chHHHHHHHHHHHHCCCCEEEE
Confidence 1112355655554432 2345788899999997655544
No 61
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=68.08 E-value=5.6 Score=41.06 Aligned_cols=105 Identities=16% Similarity=0.176 Sum_probs=73.8
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHAL 604 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaV 604 (717)
+-|+++.+-....+..++..+.+.|.+.-|++.+.-|..+-..+.+...+.|| .++-.|.++.+-+...+..+.+..+
T Consensus 64 ~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi--~vigPNc~Gii~~~~~~~~~~~~~~ 141 (288)
T 1oi7_A 64 EVDASIIFVPAPAAADAALEAAHAGIPLIVLITEGIPTLDMVRAVEEIKALGS--RLIGGNCPGIISAEETKIGIMPGHV 141 (288)
T ss_dssp CCSEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHHHHHHHHTC--EEEESSSCEEEETTTEEEESSCGGG
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEeCCCCeEEcCCCceeEEcccCC
Confidence 45888888888899999999999888766777777665554577777777787 4665667666665543333322323
Q ss_pred ecCC--CeecccchHHHHHH--HHhCCCcEE
Q psy17541 605 LSNG--AVMSRAGTAQVSLV--ARAFNVPVL 631 (717)
Q Consensus 605 laNG--~VvNKiGT~~VALa--AK~~~VPVy 631 (717)
..-| +++++.|++..+++ +...++.|-
T Consensus 142 ~~~G~va~vsqSG~l~~~~~~~~~~~g~G~s 172 (288)
T 1oi7_A 142 FKRGRVGIISRSGTLTYEAAAALSQAGLGTT 172 (288)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHhCCCCEE
Confidence 3334 68999999988876 566777765
No 62
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=67.69 E-value=33 Score=31.60 Aligned_cols=83 Identities=7% Similarity=0.058 Sum_probs=49.1
Q ss_pred HHHhhccCCCeEEEecCch--HHHHHHHHH-HHcCCeeEE----------------EEcCCCCchhHHHHHHHHHhCCCc
Q psy17541 518 FFHNKLANDDVILTYGCSS--LVEKILLTA-HEKGTKFRV----------------IIVDGSPWYEGKEMLRRLVKHQVD 578 (717)
Q Consensus 518 ~A~e~I~dGdvILTyg~SS--tV~~vL~~A-~e~Gk~FrV----------------IVvESRP~~EGr~lA~~L~~~GI~ 578 (717)
.+.+.|.+...|..+|.++ .+...+... ..-|....+ ++.-|+-..+-...++.+.+.|++
T Consensus 32 ~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~ 111 (180)
T 1jeo_A 32 SLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNN 111 (180)
T ss_dssp HHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCc
Confidence 3444566667888887654 333333322 223432211 111122222335678888899999
Q ss_pred EEEEcchHHHHHhhhccEEEEce
Q psy17541 579 CSYVLLSAVSYIMREVSKVIIGA 601 (717)
Q Consensus 579 vTyI~DSAVsyiM~~VdkVLLGA 601 (717)
+..|+++.-+ +.+.+|.+|.-.
T Consensus 112 vi~IT~~~~s-l~~~ad~~l~~~ 133 (180)
T 1jeo_A 112 IIAIVCECGN-VVEFADLTIPLE 133 (180)
T ss_dssp EEEEESSCCG-GGGGCSEEEECC
T ss_pred EEEEeCCCCh-HHHhCCEEEEeC
Confidence 9999998767 777899887643
No 63
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=67.19 E-value=40 Score=29.48 Aligned_cols=39 Identities=23% Similarity=0.322 Sum_probs=23.4
Q ss_pred hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEeccc
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cE 635 (717)
++|.|++|++.-- | +---.|+..-.++ ++..+||+|+=+
T Consensus 109 ~~dliV~G~~~~~--~-~~~~~Gs~~~~vl-~~~~~pVlvv~~ 147 (150)
T 3tnj_A 109 NVDLIVVGSHGRH--G-LALLLGSTANSVL-HYAKCDVLAVRL 147 (150)
T ss_dssp TCSEEEEEEC-----------CCCHHHHHH-HHCSSEEEEEEC
T ss_pred CCCEEEEecCCCC--C-cCeEecchHHHHH-HhCCCCEEEEeC
Confidence 7999999998642 2 2244676655554 455799999743
No 64
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=67.11 E-value=30 Score=34.65 Aligned_cols=109 Identities=16% Similarity=0.196 Sum_probs=70.1
Q ss_pred HHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCC---------CCc---------hhHHHHHHHHHhC-
Q psy17541 515 ICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDG---------SPW---------YEGKEMLRRLVKH- 575 (717)
Q Consensus 515 Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvES---------RP~---------~EGr~lA~~L~~~- 575 (717)
++..+.+.+.+ ..||..|.+.+=..++......|.. ++.++|. |-. .-...++++|.+.
T Consensus 18 ~g~~~q~~l~~-~~VlvvG~GglG~~va~~La~~Gvg-~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 18 IALDGQQKLLD-SQVLIIGLGGLGTPAALYLAGAGVG-TLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN 95 (251)
T ss_dssp THHHHHHHHHT-CEEEEECCSTTHHHHHHHHHHTTCS-EEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred cCHHHHHHHhc-CcEEEEccCHHHHHHHHHHHHcCCC-eEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC
Confidence 55666667754 7899999887655666666666753 4444442 221 1123566777764
Q ss_pred -CCcEEEEc----chHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 576 -QVDCSYVL----LSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 576 -GI~vTyI~----DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
++.++.+. +..+..++.++|.||...|.+- .-+.+.-.|+.+++|++.+.
T Consensus 96 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~r~~l~~~~~~~~~p~i~~~ 150 (251)
T 1zud_1 96 PDIQLTALQQRLTGEALKDAVARADVVLDCTDNMA---------TRQEINAACVALNTPLITAS 150 (251)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHH---------HHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHH---------HHHHHHHHHHHhCCCEEEEe
Confidence 57777664 2346667889999988766432 23567778888999987653
No 65
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=67.03 E-value=25 Score=32.61 Aligned_cols=93 Identities=14% Similarity=0.147 Sum_probs=61.0
Q ss_pred cCCCeEEEecCch--HHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc----------hHHHHHh
Q psy17541 524 ANDDVILTYGCSS--LVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL----------SAVSYIM 591 (717)
Q Consensus 524 ~dGdvILTyg~SS--tV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D----------SAVsyiM 591 (717)
..| ++++.+... -+..+.+..+ ...|++|.+++ +++.|.+.||+|+.|.. ..+.-+|
T Consensus 24 ~~g-vliSv~d~dK~~l~~~a~~l~--~lGf~i~AT~G--------Ta~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i 92 (143)
T 2yvq_A 24 QKG-ILIGIQQSFRPRFLGVAEQLH--NEGFKLFATEA--------TSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLI 92 (143)
T ss_dssp CSE-EEEECCGGGHHHHHHHHHHHH--TTTCEEEEEHH--------HHHHHHHTTCCCEEECCGGGC-----CBCHHHHH
T ss_pred CCC-EEEEecccchHHHHHHHHHHH--HCCCEEEECch--------HHHHHHHcCCeEEEEEeccCCCcccccccHHHHH
Confidence 356 777765532 2333444333 35688887653 67889999999999964 2355555
Q ss_pred h--hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 592 R--EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 592 ~--~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+ ++|+||-=.+ |.--...-.+.+=-+|-.|+||++-
T Consensus 93 ~~g~i~lVInt~~-----~~~~~~~d~~~iRR~Av~~~IP~~T 130 (143)
T 2yvq_A 93 RDGSIDLVINLPN-----NNTKFVHDNYVIRRTAVDSGIPLLT 130 (143)
T ss_dssp HTTSCCEEEECCC-----CCGGGHHHHHHHHHHHHHTTCCEEC
T ss_pred HCCCceEEEECCC-----CCCcCCccHHHHHHHHHHhCCCeEc
Confidence 4 6999986543 2112244567888889999999985
No 66
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=66.95 E-value=30 Score=38.75 Aligned_cols=115 Identities=10% Similarity=0.017 Sum_probs=68.6
Q ss_pred HHHhh--ccCCCeEEEecCch----HHHHHHHHHHHcC-CeeEEEEcCCCCch-------------------hHHHHHHH
Q psy17541 518 FFHNK--LANDDVILTYGCSS----LVEKILLTAHEKG-TKFRVIIVDGSPWY-------------------EGKEMLRR 571 (717)
Q Consensus 518 ~A~e~--I~dGdvILTyg~SS----tV~~vL~~A~e~G-k~FrVIVvESRP~~-------------------EGr~lA~~ 571 (717)
.|.++ |+||++|.+.|... ++..++.++.+.| +.++++-....+.. -|-.+.+.
T Consensus 51 EAv~~~~IkdG~tV~~gg~~G~P~~Li~AL~~r~~~~g~kdLtli~~s~g~~~~~l~~~i~~g~v~r~~~~~~g~~~r~~ 130 (509)
T 1xr4_A 51 EAIRRSGLKNGMTISFHHAFRGGDKVVNMVMAKLAEMGFRDLTLASSSLIDAHWPLIEHIKNGVVRQIYTSGLRGKLGEE 130 (509)
T ss_dssp HHHHHTTCCTTCEEEECCTTGGGCCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEEEEESBCCHHHHHH
T ss_pred HHhcCCCCCCcCEEEECCccCCHHHHHHHHHHHHHhcCCcceEEEecCCcCcchhHHHHhhcCceEEEEEccCCHHHHHH
Confidence 45567 89999999987653 3444445555444 56777754222221 12122222
Q ss_pred HHh--CCCcEEEEcchHHHHHhh----hccEEEEceeeEecCCCeecccc-----hHHHHHHHHhCCCcEEe
Q psy17541 572 LVK--HQVDCSYVLLSAVSYIMR----EVSKVIIGAHALLSNGAVMSRAG-----TAQVSLVARAFNVPVLA 632 (717)
Q Consensus 572 L~~--~GI~vTyI~DSAVsyiM~----~VdkVLLGAdaVlaNG~VvNKiG-----T~~VALaAK~~~VPVyV 632 (717)
..+ ..+|+.|..-..+.+++. .+|..|+.|...-.+|.+.-+-| +...+.++.....-|+|
T Consensus 131 i~~G~~~~P~~~s~~~g~p~ll~~~~l~iDVAlI~as~aD~~Gnls~~~g~~~~~s~~~~~a~a~~A~~VIa 202 (509)
T 1xr4_A 131 ISAGLMENPVQIHSHGGRVKLIQSGELNIDVAFLGVPCCDEFGNANGFSGKSRCGSLGYAQVDAQYAKCVVL 202 (509)
T ss_dssp HHHTCCSSCEEECCHHHHHHHHHTTSSCCSEEEEEESEEETTCCEESSSSSSCCCCCTTHHHHHHHCSEEEE
T ss_pred HHcCCCcCCeeEeccCCHHHHHhcCCCCceEEEEEeccCCCCceEEEeCCCCcccchHHHHHHHhhCCEEEE
Confidence 221 246777764344777775 58999999999999999875333 44445555555554554
No 67
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=66.61 E-value=7 Score=45.63 Aligned_cols=49 Identities=18% Similarity=0.260 Sum_probs=36.8
Q ss_pred chHHHHHHHHHHHcCCeeEEEEcCCCCchh--HHHHHHHHHhCCCcEEEEc
Q psy17541 535 SSLVEKILLTAHEKGTKFRVIIVDGSPWYE--GKEMLRRLVKHQVDCSYVL 583 (717)
Q Consensus 535 SStV~~vL~~A~e~Gk~FrVIVvESRP~~E--Gr~lA~~L~~~GI~vTyI~ 583 (717)
.+-|...|..|+++|+.++|+|--.....| ....++.|.++|+.|.|-.
T Consensus 383 ds~Iv~ALi~AA~rGv~V~vLvel~arfdee~ni~wa~~Le~aGv~Vv~g~ 433 (705)
T 2o8r_A 383 NSSIISALEAAAQSGKKVSVFVELKARFDEENNLRLSERMRRSGIRIVYSM 433 (705)
T ss_dssp CCHHHHHHHHHHHTTCEEEEEECCCSCC----CHHHHHHHHHHTCEEEECC
T ss_pred CHHHHHHHHHHHHCCCEEEEEEeCCCCcchhhhHHHHHHHHHCCCEEEEcc
Confidence 356778888888999999998864433434 4688999999999998853
No 68
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=66.23 E-value=51 Score=30.46 Aligned_cols=36 Identities=22% Similarity=0.120 Sum_probs=30.3
Q ss_pred HHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEce
Q psy17541 566 KEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGA 601 (717)
Q Consensus 566 r~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGA 601 (717)
..+++.+.+.|+++..|+++.-+.+.+.+|.+|.-.
T Consensus 104 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~ 139 (187)
T 3sho_A 104 VAALAGAAERGVPTMALTDSSVSPPARIADHVLVAA 139 (187)
T ss_dssp HHHHHHHHHTTCCEEEEESCTTSHHHHHCSEEEECC
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCcchhhCcEEEEec
Confidence 567888889999999999988888888899888643
No 69
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=66.21 E-value=15 Score=32.76 Aligned_cols=94 Identities=13% Similarity=0.093 Sum_probs=57.4
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHH-----hhhccEEEEc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYI-----MREVSKVIIG 600 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyi-----M~~VdkVLLG 600 (717)
.+.|+..|++..=..+...+.+.| +.|+++|..|. .+..|.+.|+++. .-|..-..+ +.++|.||+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~~~-----~~~~~~~~g~~~i-~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASD--IPLVVIETSRT-----RVDELRERGVRAV-LGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHH-----HHHHHHHTTCEEE-ESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCHH-----HHHHHHHcCCCEE-ECCCCCHHHHHhcCcccCCEEEEE
Confidence 357999999987666666666555 47788887764 3566777899864 344332222 3467777654
Q ss_pred eeeEecCCCeecccchHHHHHHHHhC--CCcEEecccC
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARAF--NVPVLAACET 636 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~~--~VPVyV~cEt 636 (717)
... ..-...+++.|+.. ++++++-+..
T Consensus 79 ~~~---------~~~n~~~~~~a~~~~~~~~iiar~~~ 107 (140)
T 3fwz_A 79 IPN---------GYEAGEIVASARAKNPDIEIIARAHY 107 (140)
T ss_dssp CSC---------HHHHHHHHHHHHHHCSSSEEEEEESS
T ss_pred CCC---------hHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 322 12334566677764 5666665543
No 70
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=66.20 E-value=87 Score=29.31 Aligned_cols=36 Identities=3% Similarity=-0.203 Sum_probs=29.1
Q ss_pred HHHHHHHHhCCCcEEEEcchHHHHHhhh---ccEEEEce
Q psy17541 566 KEMLRRLVKHQVDCSYVLLSAVSYIMRE---VSKVIIGA 601 (717)
Q Consensus 566 r~lA~~L~~~GI~vTyI~DSAVsyiM~~---VdkVLLGA 601 (717)
...++.+.+.|+++..|+++.-+.+.+. +|.+|.-.
T Consensus 130 i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~~~ 168 (199)
T 1x92_A 130 IQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVP 168 (199)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEECS
T ss_pred HHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEEeC
Confidence 4678888899999999999777777777 99887543
No 71
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=66.14 E-value=60 Score=32.51 Aligned_cols=98 Identities=17% Similarity=0.306 Sum_probs=55.2
Q ss_pred CeEEEecCchHHHHHHHHH-HHcCCeeEEEEcCCCCchhHHHH-HHH-HHhCCCcEEEEcch-------HHHHH---hh-
Q psy17541 527 DVILTYGCSSLVEKILLTA-HEKGTKFRVIIVDGSPWYEGKEM-LRR-LVKHQVDCSYVLLS-------AVSYI---MR- 592 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A-~e~Gk~FrVIVvESRP~~EGr~l-A~~-L~~~GI~vTyI~DS-------AVsyi---M~- 592 (717)
.+++|.|.+..+..++..+ ...| -+|++. .|.+.|... ... ....|+.+..+... .+..+ +.
T Consensus 78 ~v~~~~g~t~a~~~~~~~~~~~~g--d~vl~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 153 (390)
T 1elu_A 78 TITITDNVTTGCDIVLWGLDWHQG--DEILLT--DCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP 153 (390)
T ss_dssp GEEEESSHHHHHHHHHHHSCCCTT--CEEEEE--TTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT
T ss_pred HEEEeCChHHHHHHHHhCCCCCCC--CEEEEe--cCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC
Confidence 5788877777766666655 3334 355553 466666532 222 34468888888742 12222 22
Q ss_pred hccEEEEceeeEecCCCeecccchHHHHHHHH----hCCCcEEe
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR----AFNVPVLA 632 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK----~~~VPVyV 632 (717)
++..|++ .+.-...|.++. --.|+-+|+ .+++.|+|
T Consensus 154 ~~~~v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~ 193 (390)
T 1elu_A 154 KTRLVIL-SHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLV 193 (390)
T ss_dssp TEEEEEE-ESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEE
T ss_pred CceEEEE-eccccCCceecC---HHHHHHHHhhhhhhcCcEEEE
Confidence 3334443 222233465555 346777788 89987766
No 72
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=66.02 E-value=19 Score=35.45 Aligned_cols=99 Identities=11% Similarity=0.094 Sum_probs=57.2
Q ss_pred CCeEEEecCchHHHHHH-HHHHHcCCeeEEEEcCCCC-c--h--hHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccE
Q psy17541 526 DDVILTYGCSSLVEKIL-LTAHEKGTKFRVIIVDGSP-W--Y--EGKEMLRRLVKHQVDCSYVLL---SAVSYIMREVSK 596 (717)
Q Consensus 526 GdvILTyg~SStV~~vL-~~A~e~Gk~FrVIVvESRP-~--~--EGr~lA~~L~~~GI~vTyI~D---SAVsyiM~~Vdk 596 (717)
+.+||+.|-+..+-..| ..+.+.|. +|+++.-++ . . +....+..|...|+.+...-. .++..++..+|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN--PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC--CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC--cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence 35688888765544433 33444564 555554333 1 1 222234566677876544322 346666776666
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCC-CcEEec
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFN-VPVLAA 633 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~-VPVyV~ 633 (717)
||.-| +...-.|+..++-+|+..+ ++-+|.
T Consensus 80 vi~~a-------~~~~~~~~~~l~~aa~~~g~v~~~v~ 110 (307)
T 2gas_A 80 VICAA-------GRLLIEDQVKIIKAIKEAGNVKKFFP 110 (307)
T ss_dssp EEECS-------SSSCGGGHHHHHHHHHHHCCCSEEEC
T ss_pred EEECC-------cccccccHHHHHHHHHhcCCceEEee
Confidence 65433 3334567888888888888 888774
No 73
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=65.85 E-value=6.8 Score=39.32 Aligned_cols=93 Identities=10% Similarity=0.050 Sum_probs=55.1
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHAL 604 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaV 604 (717)
.|..||+.|.+.+...-+....+.|-.+.|+ +.+...+ +..|.+.| .++++...--...+..+|+||...+.-
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVv--ap~~~~~----l~~l~~~~-~i~~i~~~~~~~dL~~adLVIaAT~d~ 102 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVV--APTVSAE----INEWEAKG-QLRVKRKKVGEEDLLNVFFIVVATNDQ 102 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEE--CSSCCHH----HHHHHHTT-SCEEECSCCCGGGSSSCSEEEECCCCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEE--CCCCCHH----HHHHHHcC-CcEEEECCCCHhHhCCCCEEEECCCCH
Confidence 5789999999998888888877778655544 4333222 34455444 334543222222345677776443221
Q ss_pred ecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 605 LSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 605 laNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
-+ ...|+..|+ .++||-|+-
T Consensus 103 -----~~----N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 103 -----AV----NKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp -----HH----HHHHHHHSC-TTCEEEC--
T ss_pred -----HH----HHHHHHHHh-CCCEEEEeC
Confidence 22 256777888 999988764
No 74
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=65.49 E-value=35 Score=33.00 Aligned_cols=98 Identities=22% Similarity=0.265 Sum_probs=53.9
Q ss_pred eEEEecCchHHHHHHHHH----HHcCCeeEEEEcCCCCchhH----HHHHHHHHhCCCcEEEEc--ch---HHHHHhhhc
Q psy17541 528 VILTYGCSSLVEKILLTA----HEKGTKFRVIIVDGSPWYEG----KEMLRRLVKHQVDCSYVL--LS---AVSYIMREV 594 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A----~e~Gk~FrVIVvESRP~~EG----r~lA~~L~~~GI~vTyI~--DS---AVsyiM~~V 594 (717)
+++-+..|..-...|..| ...+-.++|+-+...+ .+. ..++..|...|+++++.. .. ++-.+..+.
T Consensus 157 ilv~~d~s~~~~~al~~a~~la~~~~a~l~ll~v~~~~-~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~i~~~a~~~ 235 (268)
T 3ab8_A 157 ALLGYDASESAVRALHALAPLARALGLGVRVVSVHEDP-ARAEAWALEAEAYLRDHGVEASALVLGGDAADHLLRLQGPG 235 (268)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHHHHTCCEEEEEECSSH-HHHHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHCCTT
T ss_pred EEEEECCCHHHHHHHHHHHHhhhcCCCEEEEEEEcCcH-HHHHHHHHHHHHHHHHcCCceEEEEeCCChHHHHHHHHHhC
Confidence 344455565444444443 3346667766443322 122 356677888999987643 22 233333445
Q ss_pred cEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 595 SKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
|.+++|+ .+ .+- -.|+..-.++ ++..+||+|+
T Consensus 236 dliV~G~-~~--~~~---~~Gs~~~~vl-~~~~~pvlvv 267 (268)
T 3ab8_A 236 DLLALGA-PV--RRL---VFGSTAERVI-RNAQGPVLTA 267 (268)
T ss_dssp EEEEEEC-CC--SCC---SSCCHHHHHH-HHCSSCEEEE
T ss_pred CEEEECC-cc--ccc---EeccHHHHHH-hcCCCCEEEe
Confidence 9999999 11 122 2465544444 4568999985
No 75
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=65.35 E-value=96 Score=30.50 Aligned_cols=98 Identities=11% Similarity=0.105 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHcCCeeEEEEcCCCCchhHH----HHHHHHHhCCCcEEEEcc--h-HHHHHh-----hhccEEEEceee
Q psy17541 536 SLVEKILLTAHEKGTKFRVIIVDGSPWYEGK----EMLRRLVKHQVDCSYVLL--S-AVSYIM-----REVSKVIIGAHA 603 (717)
Q Consensus 536 StV~~vL~~A~e~Gk~FrVIVvESRP~~EGr----~lA~~L~~~GI~vTyI~D--S-AVsyiM-----~~VdkVLLGAda 603 (717)
.++...+..|...|..+.++-+.. | .+++ .++..+...|++++.... . ....++ ..+|.|++|.+.
T Consensus 22 ~al~~A~~la~~~~a~l~ll~v~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~a~~~~~dliV~G~~~ 99 (290)
T 3mt0_A 22 LALKRAQLIAGVTQSHLHLLVCEK-R-RDHSAALNDLAQELREEGYSVSTNQAWKDSLHQTIIAEQQAEGCGLIIKQHFP 99 (290)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECS-S-SCCHHHHHHHHHHHHHTTCCEEEEEECSSSHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HHHHHHHHHHHhcCCeEEEEEeeC-c-HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhcCCCEEEEeccc
Confidence 345556666666677777663332 3 2332 455566678999887653 2 233333 258999999985
Q ss_pred EecCCCeec-ccchHHHHHHHHhCCCcEEecccCCcc
Q psy17541 604 LLSNGAVMS-RAGTAQVSLVARAFNVPVLAACETHKF 639 (717)
Q Consensus 604 VlaNG~VvN-KiGT~~VALaAK~~~VPVyV~cEtyKF 639 (717)
- |.+-. -.|+..-.+ .++.++||+|+-+...+
T Consensus 100 ~---~~~~~~~~gs~~~~v-l~~~~~PVlvv~~~~~~ 132 (290)
T 3mt0_A 100 D---NPLKKAILTPDDWKL-LRFAPCPVLMTKTARPW 132 (290)
T ss_dssp S---CTTSTTSCCHHHHHH-HHHCSSCEEEECCCSCS
T ss_pred C---CchhhcccCHHHHHH-HhcCCCCEEEecCCCCC
Confidence 3 22222 256665554 46678999999755544
No 76
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=65.33 E-value=1.2e+02 Score=30.50 Aligned_cols=99 Identities=12% Similarity=0.116 Sum_probs=55.1
Q ss_pred CCeEEEecCchHHHHHHHHH----HHcCCeeEEEEcCCCCchhHH-HHH-HHHHhCCCcEEEEcc--------hHHHHHh
Q psy17541 526 DDVILTYGCSSLVEKILLTA----HEKGTKFRVIIVDGSPWYEGK-EML-RRLVKHQVDCSYVLL--------SAVSYIM 591 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A----~e~Gk~FrVIVvESRP~~EGr-~lA-~~L~~~GI~vTyI~D--------SAVsyiM 591 (717)
..+++|.|.+..+..++..+ ...| -+|++. .|.+.|. ... ..+...|+.+.++.. ..+-..+
T Consensus 86 ~~v~~~~g~t~a~~~~~~~~~~~~~~~g--d~vl~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l 161 (406)
T 1kmj_A 86 EELVFVRGTTEGINLVANSWGNSNVRAG--DNIIIS--QMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLF 161 (406)
T ss_dssp GGEEEESSHHHHHHHHHHHTHHHHCCTT--CEEEEE--TTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHC
T ss_pred CeEEEeCChhHHHHHHHHHhhhhcCCCC--CEEEEe--cccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHh
Confidence 45788888777766666655 2233 356664 3555553 222 223346888888763 2333334
Q ss_pred h-hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 592 R-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 592 ~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
. ++..|++ .+.-...|.++. -..|+-+|++|+++|+|
T Consensus 162 ~~~~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 199 (406)
T 1kmj_A 162 DEKTRLLAI-THVSNVLGTENP---LAEMITLAHQHGAKVLV 199 (406)
T ss_dssp CTTEEEEEE-ESBCTTTCCBCC---HHHHHHHHHHTTCEEEE
T ss_pred ccCCeEEEE-eCCCccccCcCC---HHHHHHHHHHcCCEEEE
Confidence 3 3333333 222223365555 35677889999998776
No 77
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=65.32 E-value=17 Score=36.26 Aligned_cols=96 Identities=11% Similarity=0.089 Sum_probs=58.1
Q ss_pred eEEEecCchHHHHHH-HHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccEEEEceee
Q psy17541 528 VILTYGCSSLVEKIL-LTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL---SAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 528 vILTyg~SStV~~vL-~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D---SAVsyiM~~VdkVLLGAda 603 (717)
+||+.|-+..+-..| ..+.+.| ++|+++.-++. .-...+..|...|+.+...-. .++..++..+|.||.-|
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~-~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a-- 87 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLKLG--HPTYVFTRPNS-SKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL-- 87 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHHTT--CCEEEEECTTC-SCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC--
T ss_pred eEEEECCCchHHHHHHHHHHHCC--CcEEEEECCCC-chhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC--
Confidence 688888765544433 3344456 45665544432 222344556677877644332 35666777777666544
Q ss_pred EecCCCeecccchHHHHHHHHhCC-CcEEec
Q psy17541 604 LLSNGAVMSRAGTAQVSLVARAFN-VPVLAA 633 (717)
Q Consensus 604 VlaNG~VvNKiGT~~VALaAK~~~-VPVyV~ 633 (717)
+..+-.|+..+.-+|+..+ ++.+|.
T Consensus 88 -----~~~~~~~~~~l~~aa~~~g~v~~~v~ 113 (318)
T 2r6j_A 88 -----AFPQILDQFKILEAIKVAGNIKRFLP 113 (318)
T ss_dssp -----CGGGSTTHHHHHHHHHHHCCCCEEEC
T ss_pred -----chhhhHHHHHHHHHHHhcCCCCEEEe
Confidence 3334567888888888888 888874
No 78
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=65.30 E-value=19 Score=35.44 Aligned_cols=99 Identities=10% Similarity=0.113 Sum_probs=58.7
Q ss_pred CCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCc----hhHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEE
Q psy17541 526 DDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPW----YEGKEMLRRLVKHQVDCSYVL--L-SAVSYIMREVSKV 597 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~----~EGr~lA~~L~~~GI~vTyI~--D-SAVsyiM~~VdkV 597 (717)
..+||+.|-+..+-..|. .+.+.| ++|+++.-++. .+-...+..|...|+.+...- | .++..++..+|.|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLG--HPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTT--CCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCC--CCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 356888887655544433 344456 45666543332 122233456666787654332 1 3566667766666
Q ss_pred EEceeeEecCCCeecccchHHHHHHHHhCC-CcEEec
Q psy17541 598 IIGAHALLSNGAVMSRAGTAQVSLVARAFN-VPVLAA 633 (717)
Q Consensus 598 LLGAdaVlaNG~VvNKiGT~~VALaAK~~~-VPVyV~ 633 (717)
|.-| +..+-.|+..++-+|+..+ ++-+|.
T Consensus 82 i~~a-------~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (308)
T 1qyc_A 82 ISTV-------GSLQIESQVNIIKAIKEVGTVKRFFP 111 (308)
T ss_dssp EECC-------CGGGSGGGHHHHHHHHHHCCCSEEEC
T ss_pred EECC-------cchhhhhHHHHHHHHHhcCCCceEee
Confidence 5543 3344678888888899888 888874
No 79
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=65.01 E-value=24 Score=31.88 Aligned_cols=93 Identities=23% Similarity=0.258 Sum_probs=53.4
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHH-hCCCcEEEEcch----HHHHH-hhhccEE
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLV-KHQVDCSYVLLS----AVSYI-MREVSKV 597 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~-~~GI~vTyI~DS----AVsyi-M~~VdkV 597 (717)
..++.|+.+|++.+=..+...+...| ++|+++|.+|.. +..|. ..|+.+.+ .|. .+... +..+|.|
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g--~~V~vid~~~~~-----~~~~~~~~g~~~~~-~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG--HSVVVVDKNEYA-----FHRLNSEFSGFTVV-GDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGG-----GGGSCTTCCSEEEE-SCTTSHHHHHTTTGGGCSEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHHH-----HHHHHhcCCCcEEE-ecCCCHHHHHHcCcccCCEE
Confidence 46789999999877666666666666 478888876643 23344 56765432 221 12212 4567777
Q ss_pred EEceeeEecCCCeecccchHHHHHHHHh-CCCcEEec
Q psy17541 598 IIGAHALLSNGAVMSRAGTAQVSLVARA-FNVPVLAA 633 (717)
Q Consensus 598 LLGAdaVlaNG~VvNKiGT~~VALaAK~-~~VPVyV~ 633 (717)
|+.... ..-...++.+++. ++...+|+
T Consensus 89 i~~~~~---------~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 89 FAFTND---------DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp EECSSC---------HHHHHHHHHHHHHTSCCSEEEE
T ss_pred EEEeCC---------cHHHHHHHHHHHHHCCCCeEEE
Confidence 765432 1223455667776 66555443
No 80
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=64.77 E-value=81 Score=31.99 Aligned_cols=94 Identities=12% Similarity=0.045 Sum_probs=54.0
Q ss_pred EecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------HHHHHhh--hccEEEEc
Q psy17541 531 TYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS--------AVSYIMR--EVSKVIIG 600 (717)
Q Consensus 531 Tyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS--------AVsyiM~--~VdkVLLG 600 (717)
|-|-+..+..++..+...|. +|++.+ |.+-|..+...+...|+.+.++... ++-..+. +...|++-
T Consensus 68 ~~s~t~al~~~~~~l~~~gd--~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~ 143 (416)
T 3isl_A 68 DGTSRAGIEAVLASVIEPED--DVLIPI--YGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMV 143 (416)
T ss_dssp ESCHHHHHHHHHHHHCCTTC--EEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCcHHHHHHHHHHHhcCCCC--EEEEec--CCcccHHHHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEE
Confidence 33333445555554433333 566654 5566644666677789998888632 3444443 44444433
Q ss_pred eeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+.-...|.+.. --.|+-+|++||++|+|
T Consensus 144 -~~~nptG~~~~---l~~i~~l~~~~~~~li~ 171 (416)
T 3isl_A 144 -HGETSTGRIHP---LKAIGEACRTEDALFIV 171 (416)
T ss_dssp -SEETTTTEECC---CHHHHHHHHHTTCEEEE
T ss_pred -ccCCCCceecC---HHHHHHHHHHcCCEEEE
Confidence 33333454444 35688889999998887
No 81
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=64.72 E-value=27 Score=35.69 Aligned_cols=102 Identities=13% Similarity=0.167 Sum_probs=54.1
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-------hHHHHHhh-----
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-------SAVSYIMR----- 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-------SAVsyiM~----- 592 (717)
...+++|-|.+..+..++..+...|. +|++.+ |.+.|.. ..+...|+.+..++. .++-..+.
T Consensus 98 ~~~v~~t~g~t~a~~~~~~~~~~~gd--~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~ 171 (407)
T 2zc0_A 98 PENIVITIGGTGALDLLGRVLIDPGD--VVITEN--PSYINTL--LAFEQLGAKIEGVPVDNDGMRVDLLEEKIKELKAK 171 (407)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTC--EEEEEE--SCCHHHH--HHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHT
T ss_pred cceEEEecCHHHHHHHHHHHhcCCCC--EEEEeC--CChHHHH--HHHHHcCCEEEEcccCCCCCCHHHHHHHHHhhhcc
Confidence 34577888777776666666543343 455543 6666642 334557888777652 23434443
Q ss_pred --hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 --EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 --~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++..|++=...-...|.++..-==-.|+-+|+.|++.|++
T Consensus 172 ~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 213 (407)
T 2zc0_A 172 GQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIE 213 (407)
T ss_dssp TCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2333322111111123333211112677788999998886
No 82
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=64.58 E-value=8 Score=34.69 Aligned_cols=56 Identities=13% Similarity=0.056 Sum_probs=38.7
Q ss_pred HHHHhCCCcEEEE--cchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 570 RRLVKHQVDCSYV--LLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 570 ~~L~~~GI~vTyI--~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
+...+.||++... ..+.+...+.+.|.||||-..-+.- -.+--.+..+|+||.|+-
T Consensus 28 ~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~---------~~ik~~~~~~~ipV~vI~ 85 (108)
T 3nbm_A 28 EGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYY---------REMKVDAERLGIQIVATR 85 (108)
T ss_dssp HHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGH---------HHHHHHHTTTTCEEEECC
T ss_pred HHHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHH---------HHHHHHhhhcCCcEEEeC
Confidence 3344578888884 4556666778999999998755432 124455667899999864
No 83
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=63.88 E-value=58 Score=33.10 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=52.9
Q ss_pred CCeEEEecCchHHHHHHHHH---HHcCCeeEEEEcCCCCchhHH-HHHHHHHh-CCCcEEEEcch---------HHHHHh
Q psy17541 526 DDVILTYGCSSLVEKILLTA---HEKGTKFRVIIVDGSPWYEGK-EMLRRLVK-HQVDCSYVLLS---------AVSYIM 591 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A---~e~Gk~FrVIVvESRP~~EGr-~lA~~L~~-~GI~vTyI~DS---------AVsyiM 591 (717)
..+++|-|.+..+..++... ...| -+|++.+ |.+.+. .....|.+ .|+.+.++... .+-..+
T Consensus 87 ~~v~~~~g~t~al~~~~~~l~~~~~~g--d~vi~~~--~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l 162 (406)
T 3cai_A 87 GGVVLGADRAVLLSLLAEASSSRAGLG--YEVIVSR--LDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLI 162 (406)
T ss_dssp GGEEEESCHHHHHHHHHHHTGGGGBTT--CEEEEET--TSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHC
T ss_pred CeEEEeCChHHHHHHHHHHHhhccCCC--CEEEEcC--CccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHh
Confidence 35777777776654444332 2233 2566543 555553 23333333 58888887532 333333
Q ss_pred h-hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 592 R-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 592 ~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
. ++..|++ ...-...|.++. + -.|+-+|+.++++|+|
T Consensus 163 ~~~~~~v~~-~~~~nptG~~~~-l--~~i~~l~~~~~~~li~ 200 (406)
T 3cai_A 163 SKSTRLVAV-NSASGTLGGVTD-L--RAMTKLVHDVGALVVV 200 (406)
T ss_dssp CTTEEEEEE-ESBCTTTCBBCC-C--HHHHHHHHHTTCEEEE
T ss_pred CCCceEEEE-eCCcCCccccCC-H--HHHHHHHHHcCCEEEE
Confidence 3 3333433 222223355554 2 5678888999998776
No 84
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=63.83 E-value=23 Score=30.55 Aligned_cols=91 Identities=14% Similarity=0.203 Sum_probs=51.1
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch----HHHHH-hhhccEEEEc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS----AVSYI-MREVSKVIIG 600 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS----AVsyi-M~~VdkVLLG 600 (717)
+..|+.+|.+..=..+...+.+.|. +|+++|..+. .+..+.+.|+.+. ..|. .+..+ +.++|.||+.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~--~v~~~d~~~~-----~~~~~~~~~~~~~-~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH--EVLAVDINEE-----KVNAYASYATHAV-IANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CCEEEESCHH-----HHHTTTTTCSEEE-ECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHH-----HHHHHHHhCCEEE-EeCCCCHHHHHhcCCCCCCEEEEC
Confidence 5678999987665555556656664 5667765432 2344555676442 2222 12222 4567887765
Q ss_pred eeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+..- .--...++..|+.++++.+|
T Consensus 78 ~~~~--------~~~~~~~~~~~~~~~~~~ii 101 (144)
T 2hmt_A 78 IGAN--------IQASTLTTLLLKELDIPNIW 101 (144)
T ss_dssp CCSC--------HHHHHHHHHHHHHTTCSEEE
T ss_pred CCCc--------hHHHHHHHHHHHHcCCCeEE
Confidence 5321 01224577888888887444
No 85
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=63.83 E-value=38 Score=34.24 Aligned_cols=98 Identities=12% Similarity=0.139 Sum_probs=57.3
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMR--EVSK 596 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~--~Vdk 596 (717)
.+++|.|.+..+..++..+...|. +|++. .|.+.|..+...+...|+.+.++.. ..+-..+. ++..
T Consensus 71 ~v~~~~g~t~al~~~~~~~~~~gd--~vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 146 (396)
T 2ch1_A 71 TMCVSGSAHAGMEAMLSNLLEEGD--RVLIA--VNGIWAERAVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKC 146 (396)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTC--EEEEE--ESSHHHHHHHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSE
T ss_pred EEEECCcHHHHHHHHHHHhcCCCC--eEEEE--cCCcccHHHHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCE
Confidence 366777666666666655544443 45554 3556665433456668998888762 23333333 4566
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++ .+.--..|.++.. -.|+-+|+.+++.|+|
T Consensus 147 v~~-~~~~nptG~~~~~---~~i~~l~~~~~~~li~ 178 (396)
T 2ch1_A 147 LFL-THGDSSSGLLQPL---EGVGQICHQHDCLLIV 178 (396)
T ss_dssp EEE-ESEETTTTEECCC---TTHHHHHHHTTCEEEE
T ss_pred EEE-ECCCCCCceecCH---HHHHHHHHHcCCEEEE
Confidence 665 3333345666652 3577788889987765
No 86
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=63.64 E-value=41 Score=36.65 Aligned_cols=81 Identities=17% Similarity=0.052 Sum_probs=41.9
Q ss_pred cEEEEceeeEecCCCeecc-cchHH---------HHHHHH-hCCCcEEecccCC-cccccccCCcccccccCCccccccc
Q psy17541 595 SKVIIGAHALLSNGAVMSR-AGTAQ---------VSLVAR-AFNVPVLAACETH-KFCERVQTDALVFNELGDPNELISD 662 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNK-iGT~~---------VALaAK-~~~VPVyV~cEty-KFs~rv~~Ds~v~NEl~dP~EL~~~ 662 (717)
|..|+||=-|-.+|.|.+- +|+-. ++.-|+ ..+=.++|++++. |.-. -..++.
T Consensus 307 dv~i~ga~evD~~G~vn~~~~g~~~~~G~GG~~D~~~~A~~s~~gk~ii~~~~t~k~G~--------------~s~iv~- 371 (439)
T 3d3u_A 307 MVSINSCLEMDLMGQAASESIGYEQFSGSGGQVDFLRGAKRSKGGISIMAFPSTAKKGT--------------ESRIVP- 371 (439)
T ss_dssp EEEEECCSCEETTSCC--------------CHHHHHHHHTTSTTCEEEEECCSEETTTT--------------EESEES-
T ss_pred cEEEehheEecCCCCEeeeccCCeeecccccHHHHhhcccccCCCeEEEEEeeecCCCC--------------CCeEeE-
Confidence 8999999999999987654 44432 233443 2233466666654 2111 000111
Q ss_pred cccccccccCCCccccccceeccCCCCccEEEeCCCCcCCC
Q psy17541 663 KSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCT 703 (717)
Q Consensus 663 ~~~l~~~~~~~~l~vlNp~FDvTPPeLIT~IITE~GIlpPs 703 (717)
.++ .-.+=.||-..++.||||.|++...
T Consensus 372 -----------~~~--~g~~v~~~~~~v~~vVTE~gva~l~ 399 (439)
T 3d3u_A 372 -----------ILK--EGACVTTGRNEVDYVVTEYGVARLR 399 (439)
T ss_dssp -----------SCC--------CCSTTCSEEEETTEEEECT
T ss_pred -----------Ccc--CCCCceeCCCcceEEECCCEEEEeC
Confidence 000 0012346678999999999999875
No 87
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=63.63 E-value=7.3 Score=40.36 Aligned_cols=104 Identities=16% Similarity=0.202 Sum_probs=71.7
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEe
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALL 605 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVl 605 (717)
-|+++.+-....+..++..+.+.|.+.-|++.+.-|..+-..+.+.+.+.|| .++-.|.++.+-+...+..+....+.
T Consensus 72 ~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi--~viGPNc~Gii~~~~~~~~~~~~~~~ 149 (297)
T 2yv2_A 72 INTSIVFVPAPFAPDAVYEAVDAGIRLVVVITEGIPVHDTMRFVNYARQKGA--TIIGPNCPGAITPGQAKVGIMPGHIF 149 (297)
T ss_dssp CCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTC--EEECSSSCEEEETTTEEEESCCGGGC
T ss_pred CCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCC--EEEcCCCCeeEcccccceeecccCCC
Confidence 4888888888888999999999888766666777666555677777777887 46656666665554433332222233
Q ss_pred cCC--CeecccchHHHHHH--HHhCCCcEE
Q psy17541 606 SNG--AVMSRAGTAQVSLV--ARAFNVPVL 631 (717)
Q Consensus 606 aNG--~VvNKiGT~~VALa--AK~~~VPVy 631 (717)
.-| +++++.|++..+++ +...++.|-
T Consensus 150 ~~G~va~vSqSG~l~~~~~~~~~~~g~G~s 179 (297)
T 2yv2_A 150 KEGGVAVVSRSGTLTYEISYMLTRQGIGQS 179 (297)
T ss_dssp CEEEEEEEESCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCCee
Confidence 334 68999999987775 445777764
No 88
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=63.25 E-value=26 Score=35.55 Aligned_cols=98 Identities=18% Similarity=0.199 Sum_probs=58.1
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMR--EVSK 596 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~--~Vdk 596 (717)
.+++|.|.+..+..++..+...|. +|++. .|.+.|..+...+...|+.+..+.. ..+-..+. ++..
T Consensus 87 ~v~~t~g~t~al~~~~~~~~~~gd--~Vl~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 162 (393)
T 1vjo_A 87 TIAVSGTGTAAMEATIANAVEPGD--VVLIG--VAGYFGNRLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAI 162 (393)
T ss_dssp EEEESSCHHHHHHHHHHHHCCTTC--EEEEE--ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSE
T ss_pred EEEEeCchHHHHHHHHHhccCCCC--EEEEE--cCChhHHHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceE
Confidence 477777777777766666644443 45554 3667764445556668988887762 23333333 3555
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++- ..-...|.++. + -.|+-+|++++++|+|
T Consensus 163 v~~~-~~~nptG~~~~-l--~~i~~l~~~~~~~li~ 194 (393)
T 1vjo_A 163 LALV-HAETSTGARQP-L--EGVGELCREFGTLLLV 194 (393)
T ss_dssp EEEE-SEETTTTEECC-C--TTHHHHHHHHTCEEEE
T ss_pred EEEe-ccCCCcceecc-H--HHHHHHHHHcCCEEEE
Confidence 5542 22233455543 2 3577778888988776
No 89
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=63.04 E-value=26 Score=30.14 Aligned_cols=90 Identities=11% Similarity=0.084 Sum_probs=49.6
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHh-CCCcEEEEcch----HHHHH-hhhccEEEE
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVK-HQVDCSYVLLS----AVSYI-MREVSKVII 599 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~-~GI~vTyI~DS----AVsyi-M~~VdkVLL 599 (717)
+..|+..|.+..=..+...+.+.| ++|+++|.+|. .+..|.+ .|+.+.. .|. .+... +.++|.||+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~~~-----~~~~~~~~~~~~~~~-~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG--HDIVLIDIDKD-----ICKKASAEIDALVIN-GDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHH-----HHHHHHHHCSSEEEE-SCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCHH-----HHHHHHHhcCcEEEE-cCCCCHHHHHHcCcccCCEEEE
Confidence 357888899776555555555556 56777776543 2344443 4765432 221 11111 467888888
Q ss_pred ceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 600 GAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 600 GAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
....- -. ...++.+|+.++..-+|
T Consensus 76 ~~~~~-----~~----~~~~~~~~~~~~~~~ii 99 (140)
T 1lss_A 76 VTGKE-----EV----NLMSSLLAKSYGINKTI 99 (140)
T ss_dssp CCSCH-----HH----HHHHHHHHHHTTCCCEE
T ss_pred eeCCc-----hH----HHHHHHHHHHcCCCEEE
Confidence 75321 11 13566778887755333
No 90
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=62.71 E-value=77 Score=32.37 Aligned_cols=102 Identities=15% Similarity=0.169 Sum_probs=57.6
Q ss_pred CCeEEEecCchHHHHHHHHHHH--cCCeeEEEEcCCCCchhHH-HHHHHHHhCCCcEEEEcch--------HHHHHhhhc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHE--KGTKFRVIIVDGSPWYEGK-EMLRRLVKHQVDCSYVLLS--------AVSYIMREV 594 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e--~Gk~FrVIVvESRP~~EGr-~lA~~L~~~GI~vTyI~DS--------AVsyiM~~V 594 (717)
..+++|.|.+..+..+|..+.+ .+..-+|++. +|.+.+. ..+..+...|+.+.++... .+-..+.+=
T Consensus 86 ~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~ 163 (423)
T 3lvm_A 86 REIVFTSGATESDNLAIKGAANFYQKKGKHIITS--KTEHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDD 163 (423)
T ss_dssp GGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEE--TTSCHHHHHHHHHHHHTTCEEEEECCCTTSCCCHHHHHHHCCTT
T ss_pred CeEEEeCChHHHHHHHHHHHHHhhccCCCEEEEC--CccchHHHHHHHHHHHcCCEEEEeccCCCCccCHHHHHHhcCCC
Confidence 3678888877776666655443 1222355554 3555553 3445556789999888742 333333322
Q ss_pred cEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 595 SKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.++|+=...-...|.++. --.|+-+|+.|+++|++
T Consensus 164 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 198 (423)
T 3lvm_A 164 TILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHV 198 (423)
T ss_dssp EEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEE
T ss_pred cEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEE
Confidence 233332222223455554 34578889999998876
No 91
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=62.65 E-value=39 Score=34.25 Aligned_cols=101 Identities=16% Similarity=0.216 Sum_probs=55.8
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch----------HHHHHhh-h
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS----------AVSYIMR-E 593 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS----------AVsyiM~-~ 593 (717)
...+++|.|-+..+..++..+...|. +|++. .|.+.|... .+...|+.+..+... ++-..+. +
T Consensus 90 ~~~v~~~~g~~~a~~~~~~~~~~~gd--~vl~~--~~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 163 (388)
T 1j32_A 90 ADNILVTNGGKQSIFNLMLAMIEPGD--EVIIP--APFWVSYPE--MVKLAEGTPVILPTTVETQFKVSPEQIRQAITPK 163 (388)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTC--EEEEE--SSCCTHHHH--HHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTT
T ss_pred hhhEEEcCCHHHHHHHHHHHhcCCCC--EEEEc--CCCChhHHH--HHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcC
Confidence 34678888877777777666644443 45554 355666432 344578888877632 1222222 2
Q ss_pred ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 594 VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 594 VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+..|++ .+.--..|.++..-=-..++-+|+.+|++++|
T Consensus 164 ~~~v~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (388)
T 1j32_A 164 TKLLVF-NTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLS 201 (388)
T ss_dssp EEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ceEEEE-eCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 333433 22111234444332234567788899998876
No 92
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=62.57 E-value=21 Score=35.28 Aligned_cols=108 Identities=13% Similarity=0.108 Sum_probs=63.0
Q ss_pred CCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEce
Q psy17541 526 DDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--L-SAVSYIMREVSKVIIGA 601 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--D-SAVsyiM~~VdkVLLGA 601 (717)
+.+||+.|-+..+-..|. .+.+.|. ++|+++.-+|... -+..|...|+.+...- | .++..++..+|.||.-|
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~~V~~~~R~~~~~---~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a 80 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGT-FKVRVVTRNPRKK---AAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVT 80 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCS-SEEEEEESCTTSH---HHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCC-ceEEEEEcCCCCH---HHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence 467899988776655444 3444452 5666665444322 1345666777654322 1 45667778888887655
Q ss_pred eeEecCCCeecccchHHHHHHHHhCCCcEEecccCC
Q psy17541 602 HALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 602 daVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
...-....-.+-.|+..+.-+|+..+++-+|.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~ 116 (299)
T 2wm3_A 81 NYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLE 116 (299)
T ss_dssp CHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred CCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 321111111234477777778888888877776554
No 93
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=62.43 E-value=7.7 Score=39.92 Aligned_cols=105 Identities=18% Similarity=0.221 Sum_probs=71.5
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHAL 604 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaV 604 (717)
+-|+++.+-....+..++..|.+.|.+.-|++.+.-+..+-+.+.+...+.|+. ++-.|.++.+-+..-+...-+..+
T Consensus 64 ~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~--liGPNc~Gi~~p~~~~~~~~~~~~ 141 (288)
T 2nu8_A 64 GATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPTLDMLTVKVKLDEAGVR--MIGPNTPGVITPGECKIGIQPGHI 141 (288)
T ss_dssp CCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHHHHTCE--EECSSCCEEEETTTEEEESSCTTS
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCE--EEecCCcceecCCcceeEecccCC
Confidence 458888888888889999999999988777778877776667788888888874 455566655555432221111122
Q ss_pred ecCC--CeecccchHHHHHH--HHhCCCcEE
Q psy17541 605 LSNG--AVMSRAGTAQVSLV--ARAFNVPVL 631 (717)
Q Consensus 605 laNG--~VvNKiGT~~VALa--AK~~~VPVy 631 (717)
..-| +++++.||...+++ +...++.|-
T Consensus 142 ~~~G~i~~vsqSG~l~~~~~~~~~~~g~G~s 172 (288)
T 2nu8_A 142 HKPGKVGIVSRSGTLTYEAVKQTTDYGFGQS 172 (288)
T ss_dssp CCEEEEEEEESCHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHhcCCCEE
Confidence 3334 57888999776665 456677765
No 94
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=62.42 E-value=43 Score=33.75 Aligned_cols=98 Identities=12% Similarity=0.140 Sum_probs=55.1
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH---H---HHHh----hhcc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA---V---SYIM----REVS 595 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA---V---syiM----~~Vd 595 (717)
..+++|-|.+..+..++..+ .| -+|++. .|.+.|... .+...|+++..++... + ..++ .++.
T Consensus 77 ~~v~~~~g~~~al~~~~~~~--~g--d~vl~~--~p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~ 148 (364)
T 1lc5_A 77 SWILAGNGETESIFTVASGL--KP--RRAMIV--TPGFAEYGR--ALAQSGCEIRRWSLREADGWQLTDAILEALTPDLD 148 (364)
T ss_dssp GGEEEESSHHHHHHHHHHHH--CC--SEEEEE--ESCCTHHHH--HHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCC
T ss_pred HHEEECCCHHHHHHHHHHHc--CC--CeEEEe--CCCcHHHHH--HHHHcCCeEEEEeCCcccccchhHHHHHhccCCCC
Confidence 35788888777766666655 45 255554 366766433 3345688888776321 1 1122 2344
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.|++ .+--...|.++..-=-..++-+|++|++.|++
T Consensus 149 ~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 184 (364)
T 1lc5_A 149 CLFL-CTPNNPTGLLPERPLLQAIADRCKSLNINLIL 184 (364)
T ss_dssp EEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEE-eCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEE
Confidence 4554 22222345554432234567788899998876
No 95
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=62.39 E-value=56 Score=30.24 Aligned_cols=36 Identities=8% Similarity=-0.090 Sum_probs=29.6
Q ss_pred HHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEc
Q psy17541 565 GKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIG 600 (717)
Q Consensus 565 Gr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLG 600 (717)
-..+++.+.+.|+++..|+++.-+.+.+.+|.+|.-
T Consensus 95 ~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~ 130 (186)
T 1m3s_A 95 LIHTAAKAKSLHGIVAALTINPESSIGKQADLIIRM 130 (186)
T ss_dssp HHHHHHHHHHTTCEEEEEESCTTSHHHHHCSEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEECCCCCchHHhCCEEEEe
Confidence 357788899999999999998777777788987753
No 96
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=62.37 E-value=39 Score=34.34 Aligned_cols=101 Identities=15% Similarity=0.106 Sum_probs=56.6
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-----------SAVSYIMR- 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-----------SAVsyiM~- 592 (717)
...+++|-|.+..+..++......| -+|++ ..|.+.|...+ +...|+.+..++. .++-..+.
T Consensus 89 ~~~v~~t~g~~~a~~~~~~~l~~~g--d~vl~--~~p~~~~~~~~--~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~ 162 (399)
T 1c7n_A 89 TDWIINTAGVVPAVFNAVREFTKPG--DGVII--ITPVYYPFFMA--IKNQERKIIECELLEKDGYYTIDFQKLEKLSKD 162 (399)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCCTT--CEEEE--CSSCCTHHHHH--HHTTTCEEEECCCEEETTEEECCHHHHHHHHTC
T ss_pred hhhEEEcCCHHHHHHHHHHHhcCCC--CEEEE--cCCCcHhHHHH--HHHcCCEEEecccccCCCCEEEcHHHHHHHhcc
Confidence 3457778777777666666553334 24555 35777775332 3456877666542 12333333
Q ss_pred -hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 -EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++..|++ .+.-...|.++..-=-..|+-+|+.|+++|++
T Consensus 163 ~~~~~v~~-~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 202 (399)
T 1c7n_A 163 KNNKALLF-CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWS 202 (399)
T ss_dssp TTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEE
T ss_pred CCCcEEEE-cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 4445554 33222345555433345577788999998876
No 97
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=62.01 E-value=14 Score=38.07 Aligned_cols=91 Identities=11% Similarity=0.154 Sum_probs=56.1
Q ss_pred HHHHHHHHHhh----ccCCCeEEEecCchHHHHHHHHHHHc--CCeeEEEEcCC------CCchhHHHHHHHHHhC-CCc
Q psy17541 512 GNAICMFFHNK----LANDDVILTYGCSSLVEKILLTAHEK--GTKFRVIIVDG------SPWYEGKEMLRRLVKH-QVD 578 (717)
Q Consensus 512 ~e~Ia~~A~e~----I~dGdvILTyg~SStV~~vL~~A~e~--Gk~FrVIVvES------RP~~EGr~lA~~L~~~-GI~ 578 (717)
.+.|+..|+++ |.+|++|. +++++|+..+....... -+.++|+-+++ .|......+++.|.++ |++
T Consensus 92 k~~ia~~AA~~l~~~i~~~~~ig-l~~GsT~~~~~~~L~~~~~~~~~~vv~l~ggl~~~~~~~~~~~~i~~~la~~~~~~ 170 (315)
T 2w48_A 92 LSAMGQHGALLVDRLLEPGDIIG-FSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAE 170 (315)
T ss_dssp HHHHHHHHHHHHHHHCCTTCEEE-ECCSHHHHHHHTTSCCCSSCCCCEEEESBCBCTTSSCGGGCHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHhCCCCCEEE-ECChHHHHHHHHhhccccCCCCcEEEEcCCCCCCCCccccCHHHHHHHHHHHHCCc
Confidence 34566666554 88888755 58889888877665321 14577776643 2333445778888775 877
Q ss_pred EEEEcc-----hH-H-HHHh------------hhccEEEEceee
Q psy17541 579 CSYVLL-----SA-V-SYIM------------REVSKVIIGAHA 603 (717)
Q Consensus 579 vTyI~D-----SA-V-syiM------------~~VdkVLLGAda 603 (717)
+.++.. +. . -.++ ..+|+.|+|.-+
T Consensus 171 ~~~l~~P~~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIGg 214 (315)
T 2w48_A 171 SHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGS 214 (315)
T ss_dssp ECCCCSBSBCSSHHHHHHHHHSHHHHHHHHHHTTCSEEEECCBC
T ss_pred eeEeeCCcccCCHHHHHHHHhChHHHHHHHHHhcCCEEEEccCc
Confidence 654421 11 1 1112 369999999873
No 98
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=61.95 E-value=27 Score=36.00 Aligned_cols=100 Identities=15% Similarity=0.215 Sum_probs=56.0
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH-------HHHHh----hhc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA-------VSYIM----REV 594 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA-------VsyiM----~~V 594 (717)
..+++|.|.+..+..++..+...|. +|++.+ |.+.|...+ +...|+.+..+.... +..+. +++
T Consensus 100 ~~v~~t~g~~~a~~~~~~~~~~~gd--~Vl~~~--p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~ 173 (412)
T 2x5d_A 100 SEAIVTIGSKEGLAHLMLATLDHGD--TILVPN--PSYPIHIYG--AVIAGAQVRSVPLVPGIDFFNELERAIRESIPKP 173 (412)
T ss_dssp TSEEEESCHHHHHHHHHHHHCCTTC--EEEEEE--SCCHHHHHH--HHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCC
T ss_pred cCEEEcCChHHHHHHHHHHhCCCCC--EEEEcC--CCchhHHHH--HHHcCCEEEEeecCCccCCCCCHHHHHHhcccCc
Confidence 4688888877777666665543342 455543 667764333 334688887776321 12221 234
Q ss_pred cEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 595 SKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
..|+| .+.--..|.++..---..|+-+|+.|++.+++
T Consensus 174 ~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 210 (412)
T 2x5d_A 174 RMMIL-GFPSNPTAQCVELDFFERVVALAKQYDVMVVH 210 (412)
T ss_dssp SEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred eEEEE-CCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 55555 22222235444432224577788999998876
No 99
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=61.95 E-value=12 Score=37.60 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=65.1
Q ss_pred CCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhhh--ccE
Q psy17541 525 NDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMRE--VSK 596 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~~--Vdk 596 (717)
.+.+||+.|-+..|-..|. .+.+.|..++|++++.++.......+..+... -.++++. | .++..++.. +|.
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDH-PNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTC-TTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccC-CCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 4568999998877655544 45566877899988755432211111111111 1233332 2 456667776 888
Q ss_pred EEEceeeEecCC--------CeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 597 VIIGAHALLSNG--------AVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 597 VLLGAdaVlaNG--------~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
||--|-....+. .-+|-.||..+.-+|+.++++-+|.+.+
T Consensus 102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 149 (346)
T 4egb_A 102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVST 149 (346)
T ss_dssp EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEE
T ss_pred EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 887664332211 1357789999999999999985554433
No 100
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=61.82 E-value=20 Score=38.77 Aligned_cols=92 Identities=17% Similarity=0.188 Sum_probs=54.7
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhh-ccEEEEceee
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMRE-VSKVIIGAHA 603 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~-VdkVLLGAda 603 (717)
.|..|+.+|...+=..+-+.+++.| ++|.+.|.++..+. .+...|.+.||++.+-.+.. .++.. +|.|+++.-
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G--~~V~~~D~~~~~~~-~~~~~L~~~gi~~~~g~~~~--~~~~~~~d~vv~spg- 81 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLG--AIVTVNDGKPFDEN-PTAQSLLEEGIKVVCGSHPL--ELLDEDFCYMIKNPG- 81 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTT--CEEEEEESSCGGGC-HHHHHHHHTTCEEEESCCCG--GGGGSCEEEEEECTT-
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEeCCcccCC-hHHHHHHhCCCEEEECCChH--HhhcCCCCEEEECCc-
Confidence 3677888876644334444444445 78999999875432 34568889999887644422 23455 788876542
Q ss_pred EecCCCeecccchHHHHHHHHhCCCcEE
Q psy17541 604 LLSNGAVMSRAGTAQVSLVARAFNVPVL 631 (717)
Q Consensus 604 VlaNG~VvNKiGT~~VALaAK~~~VPVy 631 (717)
|-. +.+....|++.|+||+
T Consensus 82 i~~---------~~p~~~~a~~~gi~v~ 100 (451)
T 3lk7_A 82 IPY---------NNPMVKKALEKQIPVL 100 (451)
T ss_dssp SCT---------TSHHHHHHHHTTCCEE
T ss_pred CCC---------CChhHHHHHHCCCcEE
Confidence 111 1344455666666655
No 101
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=61.64 E-value=10 Score=41.53 Aligned_cols=97 Identities=12% Similarity=0.140 Sum_probs=58.1
Q ss_pred HHHHhhccCCCeEEEecCchHHHHHHHHHHHc---CCeeEEEEcCC-C----------------CchhHHHHHHHHHhCC
Q psy17541 517 MFFHNKLANDDVILTYGCSSLVEKILLTAHEK---GTKFRVIIVDG-S----------------PWYEGKEMLRRLVKHQ 576 (717)
Q Consensus 517 ~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~---Gk~FrVIVvES-R----------------P~~EGr~lA~~L~~~G 576 (717)
+.|..+|+||++|.+.|+...-..++....++ -+.++|+-.-+ . |++-|-.+.+.+.+-+
T Consensus 10 eeAv~~IkdG~tI~~ggf~g~P~~Li~AL~~r~~~~kdLtl~~~~s~g~~~~~~~~l~~~i~~~~~~~~~~lr~~i~~G~ 89 (436)
T 2oas_A 10 LEAVSLIRSGETLWTHSMGATPKVLLDALAKHALTLDNITLLQLHTEGAESLSHPSLLGHLRHRCFFGGVPTRPLLQSGD 89 (436)
T ss_dssp HHHHTTCCTTCEEEECCBTTCCHHHHHHHHHHGGGCCSEEEEESSBSSCGGGGSGGGTTTEEEEESSCCTTTHHHHHTTS
T ss_pred HHHHhhCCCCCEEEECCccCcHHHHHHHHHHhhccCCCEEEEEecccCChhhhHHHhcCcEEEeecCCCHHHHHHHHcCC
Confidence 34567899999999998864333333333332 26778875321 1 1222223444444444
Q ss_pred CcEEEEcchHHHHHhh----hccEEEEceeeEecCCCeecc
Q psy17541 577 VDCSYVLLSAVSYIMR----EVSKVIIGAHALLSNGAVMSR 613 (717)
Q Consensus 577 I~vTyI~DSAVsyiM~----~VdkVLLGAdaVlaNG~VvNK 613 (717)
+..+-+..+.+..++. .+|.+|+.|...-.+|.+.-.
T Consensus 90 ~~y~P~~ls~~~~~l~~~~l~~DVAlI~as~aD~~Gn~s~~ 130 (436)
T 2oas_A 90 ADYVPIFLSEVPKLFRSGEQKIDTAIIQVSPPDKHGMCSLG 130 (436)
T ss_dssp SEECCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTCEEECT
T ss_pred CeeeCCccccHHHHHHcCCCCCCEEEEEeccCCCCceEEEe
Confidence 5444444555554443 489999999999999987643
No 102
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=61.57 E-value=49 Score=33.21 Aligned_cols=109 Identities=15% Similarity=0.050 Sum_probs=64.5
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHh-------CCCcEEEEc---chHHHHHhhh
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVK-------HQVDCSYVL---LSAVSYIMRE 593 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~-------~GI~vTyI~---DSAVsyiM~~ 593 (717)
.+.+||+.|-+..|-..|.. +.+.| ++|+++.-++.... ..+..|.. .++.+...- ..++..++.+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 100 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLN--QVVIGLDNFSTGHQ-YNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKG 100 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCH-HHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTT
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCCCch-hhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcC
Confidence 46789999988777655544 44556 56777765443222 22334433 344443322 1346667777
Q ss_pred ccEEEEceeeEecCC--------CeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 594 VSKVIIGAHALLSNG--------AVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 594 VdkVLLGAdaVlaNG--------~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
+|.||--|-....+. .-+|-.||..+.-+|+..+++-+|.+.+
T Consensus 101 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 101 VDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp CSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 887776553211000 1357889999999999999866655444
No 103
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=61.49 E-value=42 Score=34.89 Aligned_cols=102 Identities=14% Similarity=0.186 Sum_probs=54.5
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-------hHHHHHhh-----
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-------SAVSYIMR----- 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-------SAVsyiM~----- 592 (717)
...+++|-|.+..+..++......|. +|++. .|.+.|.. ..+...|+.+..++. .++-..+.
T Consensus 109 ~~~v~~t~G~~~al~~~~~~l~~~gd--~Vl~~--~p~y~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~ 182 (425)
T 1vp4_A 109 EDNLIFTVGSQQALDLIGKLFLDDES--YCVLD--DPAYLGAI--NAFRQYLANFVVVPLEDDGMDLNVLERKLSEFDKN 182 (425)
T ss_dssp GGGEEEEEHHHHHHHHHHHHHCCTTC--EEEEE--ESCCHHHH--HHHHTTTCEEEEEEEETTEECHHHHHHHHHHHHHT
T ss_pred cccEEEeccHHHHHHHHHHHhCCCCC--EEEEe--CCCcHHHH--HHHHHcCCEEEEeccCCCCCCHHHHHHHHHhhhhc
Confidence 34688888887776666665533343 45553 36666643 233457888777642 23333333
Q ss_pred ----hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 ----EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 ----~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++..|++=...-...|.++..-=-..|+-+|+++++++++
T Consensus 183 ~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 226 (425)
T 1vp4_A 183 GKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVE 226 (425)
T ss_dssp TCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 2333322111111235444332223577788999998876
No 104
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=61.29 E-value=7 Score=33.48 Aligned_cols=57 Identities=14% Similarity=0.080 Sum_probs=39.7
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCC-CchhHHHHHHHHHh------CCCcEEEEcc
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGS-PWYEGKEMLRRLVK------HQVDCSYVLL 584 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESR-P~~EGr~lA~~L~~------~GI~vTyI~D 584 (717)
.|.+..........|......+..+.++++|-. |...|..+++.|.+ ..+++.+++.
T Consensus 37 ~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~ 100 (146)
T 3ilh_A 37 EIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSS 100 (146)
T ss_dssp EEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECS
T ss_pred eeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeC
Confidence 555555555556666655555678999998855 88899999999987 3455555553
No 105
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=61.27 E-value=47 Score=33.35 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=61.6
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHc--CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH-------H-HHHhhh
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEK--GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA-------V-SYIMRE 593 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~--Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA-------V-syiM~~ 593 (717)
....+++|-|.+..+..++..+... |. +|++. .|.+.|... .+...|+.+.++.... + ..+-++
T Consensus 81 ~~~~i~~t~g~~~al~~~~~~~~~~~~gd--~vl~~--~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~ 154 (376)
T 3ezs_A 81 KENELISTLGSREVLFNFPSFVLFDYQNP--TIAYP--NPFYQIYEG--AAKFIKAKSLLMPLTKENDFTPSLNEKELQE 154 (376)
T ss_dssp CGGGEEEESSSHHHHHHHHHHHTTTCSSC--EEEEE--ESCCTHHHH--HHHHTTCEEEEEECCGGGTSCCCCCHHHHHH
T ss_pred CHHHEEECcCcHHHHHHHHHHHcCCCCCC--EEEEe--cCCcHhHHH--HHHHcCCEEEEcccCCCCCcchhHHhhhccC
Confidence 3456888888888877777666544 33 45554 466666432 3456788888876322 1 112245
Q ss_pred ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 594 VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 594 VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
...|++- .--...|.++..---..++-+|+.|++.+++
T Consensus 155 ~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 192 (376)
T 3ezs_A 155 VDLVILN-SPNNPTGRTLSLEELISWVKLALKHDFILIN 192 (376)
T ss_dssp CSEEEEC-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCEEEEc-CCCCCcCCCCCHHHHHHHHHHHHHcCcEEEE
Confidence 6677663 2223345555544445667778999998876
No 106
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=61.18 E-value=48 Score=33.47 Aligned_cols=99 Identities=14% Similarity=0.092 Sum_probs=57.9
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh---hc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMR---EV 594 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~---~V 594 (717)
..+++|.|.+..+..++..+...|. +|++.+ |.+-|..+...+...|+.+.++.. ..+-..+. ++
T Consensus 60 ~~v~~t~g~t~a~~~~~~~~~~~gd--~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 135 (392)
T 2z9v_A 60 KPVILHGEPVLGLEAAAASLISPDD--VVLNLA--SGVYGKGFGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEI 135 (392)
T ss_dssp CCEEESSCTHHHHHHHHHHHCCTTC--CEEEEE--SSHHHHHHHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTC
T ss_pred CEEEEeCCchHHHHHHHHHhcCCCC--EEEEec--CCcccHHHHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCC
Confidence 4677777777776666665544443 455543 444444334444557888887752 23444442 44
Q ss_pred cEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 595 SKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
..|++ .+.-...|.++. --.|+-+|++||++|++
T Consensus 136 ~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 169 (392)
T 2z9v_A 136 TVVSV-CHHDTPSGTINP---IDAIGALVSAHGAYLIV 169 (392)
T ss_dssp CEEEE-ESEEGGGTEECC---HHHHHHHHHHTTCEEEE
T ss_pred cEEEE-eccCCCCceecc---HHHHHHHHHHcCCeEEE
Confidence 45544 333333465554 34778889999998776
No 107
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=61.07 E-value=58 Score=33.43 Aligned_cols=102 Identities=11% Similarity=0.035 Sum_probs=55.7
Q ss_pred CCCeEE--EecCchHHHHHH--HHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc----------hHHHHH
Q psy17541 525 NDDVIL--TYGCSSLVEKIL--LTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL----------SAVSYI 590 (717)
Q Consensus 525 dGdvIL--Tyg~SStV~~vL--~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D----------SAVsyi 590 (717)
...+++ |.|-+..+..++ ..+...|. +|++.+ |.+.|.. ..+...|+++..+.. ..+-..
T Consensus 96 ~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd--~Vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 169 (412)
T 1yaa_A 96 EDRVISVQSLSGTGALHISAKFFSKFFPDK--LVYLSK--PTWANHM--AIFENQGLKTATYPYWANETKSLDLNGFLNA 169 (412)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTC--CEEEEE--SCCTTHH--HHHHTTTCCEEEEECEETTTTEECHHHHHHH
T ss_pred cceEEEEeccchHhHHHHHHHHHHHhCCCC--EEEEeC--CCCccHH--HHHHHcCceEEEEeeecCCCCccCHHHHHHH
Confidence 456777 888777666552 33333443 455543 6666643 334456888777653 123333
Q ss_pred hhh---ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 591 MRE---VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 591 M~~---VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+.+ .++|++=...-...|.+++.-=-..++-+|+.|++.+++
T Consensus 170 l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~ 214 (412)
T 1yaa_A 170 IQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALF 214 (412)
T ss_dssp HHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 333 245544233333345555443333577788899988776
No 108
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=61.02 E-value=30 Score=34.39 Aligned_cols=98 Identities=10% Similarity=0.089 Sum_probs=57.4
Q ss_pred CeEEEecCchHHHHHH-HHHHHcCCeeEEEEcCCCC-c---hhHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccEEE
Q psy17541 527 DVILTYGCSSLVEKIL-LTAHEKGTKFRVIIVDGSP-W---YEGKEMLRRLVKHQVDCSYVLL---SAVSYIMREVSKVI 598 (717)
Q Consensus 527 dvILTyg~SStV~~vL-~~A~e~Gk~FrVIVvESRP-~---~EGr~lA~~L~~~GI~vTyI~D---SAVsyiM~~VdkVL 598 (717)
.+||+.|-+..+-..| ..+.+.| ++|+++.-++ . .+....+..|...|+.+...-. .++..++..+|.||
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFS--HPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTT--CCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cEEEEEcCCchhHHHHHHHHHhCC--CcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 4688888765444333 3344456 4566554443 1 1222334456667876544322 35666777776665
Q ss_pred EceeeEecCCCeecccchHHHHHHHHhCC-CcEEec
Q psy17541 599 IGAHALLSNGAVMSRAGTAQVSLVARAFN-VPVLAA 633 (717)
Q Consensus 599 LGAdaVlaNG~VvNKiGT~~VALaAK~~~-VPVyV~ 633 (717)
.-| +...-.|+..+.-+|+..+ ++-+|.
T Consensus 83 ~~a-------~~~~~~~~~~l~~aa~~~g~v~~~v~ 111 (321)
T 3c1o_A 83 SAL-------PFPMISSQIHIINAIKAAGNIKRFLP 111 (321)
T ss_dssp ECC-------CGGGSGGGHHHHHHHHHHCCCCEEEC
T ss_pred ECC-------CccchhhHHHHHHHHHHhCCccEEec
Confidence 543 3334678888888888888 888874
No 109
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=60.95 E-value=56 Score=31.04 Aligned_cols=35 Identities=9% Similarity=-0.034 Sum_probs=30.1
Q ss_pred HHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEc
Q psy17541 566 KEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIG 600 (717)
Q Consensus 566 r~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLG 600 (717)
..+++.+.+.|+++..|+++.-+.+.+.+|.+|.-
T Consensus 106 i~~~~~ak~~g~~vI~IT~~~~s~La~~ad~~l~~ 140 (200)
T 1vim_A 106 VNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVV 140 (200)
T ss_dssp HHHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEEC
T ss_pred HHHHHHHHHCCCeEEEEECCCCChHHHhCCEEEEE
Confidence 57788889999999999998878888889998863
No 110
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=60.88 E-value=36 Score=33.69 Aligned_cols=98 Identities=19% Similarity=0.233 Sum_probs=53.9
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhhh---cc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMRE---VS 595 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~~---Vd 595 (717)
.+++|.|-+..+..++..+...|. +|++.+ .|.+.+ .+...+...|+.+.++.. ..+-..+.+ +.
T Consensus 58 ~v~~~~g~t~a~~~~~~~~~~~gd--~vi~~~-~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 133 (366)
T 1m32_A 58 SVLLQGSGSYAVEAVLGSALGPQD--KVLIVS-NGAYGA-RMVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTIS 133 (366)
T ss_dssp EEEEESCHHHHHHHHHHHSCCTTC--CEEEEE-SSHHHH-HHHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCC
T ss_pred EEEEecChHHHHHHHHHHhcCCCC--eEEEEe-CCCccH-HHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeE
Confidence 477777777776666665543343 355543 344433 223344556888887752 223333432 33
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.|++ .+.-...|.++. --.|+-+|+.||+++++
T Consensus 134 ~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 166 (366)
T 1m32_A 134 HIAM-VHSETTTGMLNP---IDEVGALAHRYGKTYIV 166 (366)
T ss_dssp EEEE-ESEETTTTEECC---HHHHHHHHHHHTCEEEE
T ss_pred EEEE-ecccCCcceecC---HHHHHHHHHHcCCEEEE
Confidence 3332 222222376665 34777888999998776
No 111
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=60.64 E-value=27 Score=36.44 Aligned_cols=98 Identities=14% Similarity=0.149 Sum_probs=55.7
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHHH-HHhCCCcEEEEcch--HHHHHhh-hccEEEEce
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLRR-LVKHQVDCSYVLLS--AVSYIMR-EVSKVIIGA 601 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~~-L~~~GI~vTyI~DS--AVsyiM~-~VdkVLLGA 601 (717)
++|+|-|-+..+..+|..+...|. +|++.+ |.+.+. ..... +...|+.+.++... .+-..+. ++..|++ .
T Consensus 73 ~~~~~~~gt~a~~~al~~l~~~gd--~vi~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~i~~~~~~v~~-~ 147 (412)
T 2cb1_A 73 EAVVLASGQAATFAALLALLRPGD--EVVAAK--GLFGQTIGLFGQVLSLMGVTVRYVDPEPEAVREALSAKTRAVFV-E 147 (412)
T ss_dssp EEEEESSHHHHHHHHHHTTCCTTC--EEEEET--TCCHHHHHHHHHTTTTTTCEEEEECSSHHHHHHHCCTTEEEEEE-E
T ss_pred cEEEECCHHHHHHHHHHHHhCCCC--EEEEeC--CCchhHHHHHHHHHHHcCCEEEEECCCHHHHHHHhccCCeEEEE-e
Confidence 577776666666666555433343 566644 556553 22332 55689999998743 3333333 3444444 2
Q ss_pred eeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 602 HALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 602 daVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
..--..|.+.. -..|+-+|++||++++|
T Consensus 148 ~~~n~~G~~~~---l~~i~~l~~~~~~~li~ 175 (412)
T 2cb1_A 148 TVANPALLVPD---LEALATLAEEAGVALVV 175 (412)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHHHTCEEEE
T ss_pred CCCCCCccccc---HHHHHHHHHHcCCEEEE
Confidence 22223455443 45678889999998886
No 112
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=60.62 E-value=68 Score=33.23 Aligned_cols=101 Identities=13% Similarity=0.135 Sum_probs=59.9
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-----------SAVSYIMR- 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-----------SAVsyiM~- 592 (717)
...+++|-|.+..+..+|..+.. ..-+|++.+ |.+.|... .+...|..+..++. .++-..+.
T Consensus 119 ~~~v~~~~g~~ea~~~a~~~~~~--~gd~Vi~~~--~~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~ 192 (421)
T 3l8a_A 119 KEDILFIDGVVPAISIALQAFSE--KGDAVLINS--PVYYPFAR--TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID 192 (421)
T ss_dssp GGGEEEESCHHHHHHHHHHHHSC--TEEEEEEEE--SCCHHHHH--HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH
T ss_pred HHHEEEcCCHHHHHHHHHHHhcC--CCCEEEECC--CCcHHHHH--HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc
Confidence 33577777777777777766633 333555543 67777433 33446777666542 23444443
Q ss_pred -hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 -EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++..|+| ...--..|.++.+----.|+-+|+.|++.+++
T Consensus 193 ~~~~~vil-~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~ 232 (421)
T 3l8a_A 193 NNVKIYLL-CSPHNPGGRVWDNDDLIKIAELCKKHGVILVS 232 (421)
T ss_dssp TTEEEEEE-ESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred cCCeEEEE-CCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4556655 33333345555555556678889999998886
No 113
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=60.51 E-value=15 Score=40.70 Aligned_cols=95 Identities=9% Similarity=0.042 Sum_probs=61.4
Q ss_pred HHHHhhccCCCeEEEecCch---HHHHHHHHHHH--cCCeeEEEEcC---------C----------CCchhHHHHHHHH
Q psy17541 517 MFFHNKLANDDVILTYGCSS---LVEKILLTAHE--KGTKFRVIIVD---------G----------SPWYEGKEMLRRL 572 (717)
Q Consensus 517 ~~A~e~I~dGdvILTyg~SS---tV~~vL~~A~e--~Gk~FrVIVvE---------S----------RP~~EGr~lA~~L 572 (717)
+.|..+|+||++|.+-|+.. .+...|..-.+ .-+.++||-.- . ++++.| ...|.+
T Consensus 30 eEAv~lIkdGdtV~~gG~~g~P~~L~~AL~~r~~~g~~~~ltl~~~~~~G~~~~~~~~~~~~~~~~~~~~f~~-~~~R~~ 108 (455)
T 3qli_A 30 EEAVSSIASGSHLSMGMFAAEPPALLKALADRATRGDIGDLRVYYFETAKIAGDTILRYELNNRIKPYSMFVT-AVERAL 108 (455)
T ss_dssp HHHTTTCCTTCEEEECSGGGSCHHHHHHHHHHHHTTCCCSEEEEESSCCHHHHHTTTCGGGTTTEEEEESSCC-HHHHHH
T ss_pred HHHHHhCCCCCEEEECCcccCHHHHHHHHHHHHhhCCCcceEEEEecccccchhhhhChhhcCcEEEeeCcCC-hhHHHH
Confidence 34567999999999987754 34444443322 22456776321 1 134455 345666
Q ss_pred HhCC--------CcEEEEcchHHHHHhh---hccEEEEceeeEecCCCeec
Q psy17541 573 VKHQ--------VDCSYVLLSAVSYIMR---EVSKVIIGAHALLSNGAVMS 612 (717)
Q Consensus 573 ~~~G--------I~vTyI~DSAVsyiM~---~VdkVLLGAdaVlaNG~VvN 612 (717)
...| +...-+..+.+..++. .+|.+|+.|...-.+|.+.-
T Consensus 109 i~~G~~~~~~~~~~y~p~~ls~~p~~~~~~~~iDVAli~vs~~D~~G~~s~ 159 (455)
T 3qli_A 109 IRRGIEDGGRKVVNYVPSNFHQAPRLLAEEIGIDTFMHTVSPMDCHGYFSL 159 (455)
T ss_dssp HHHHHHTTTCCCCCCCCCCGGGHHHHHHTTTCCSEEEEEECCCCTTSEEEC
T ss_pred HhCCCcccCcCcEEEECccHHHHHHHHHhcCCCCEEEEEEecCCCCceEEE
Confidence 6666 4444455788888775 58999999999999998764
No 114
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=60.41 E-value=25 Score=36.07 Aligned_cols=111 Identities=14% Similarity=0.139 Sum_probs=65.4
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHc-CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc----hHHHHHhhhccEEE
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEK-GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL----SAVSYIMREVSKVI 598 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~-Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D----SAVsyiM~~VdkVL 598 (717)
.|.+||+.|-+..+-..|.. +.+. |. .+|+++.-.+. ....+...|...++.+. ..| .++..++..+|.||
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~-~~V~~~~r~~~-~~~~~~~~~~~~~v~~~-~~Dl~d~~~l~~~~~~~D~Vi 96 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNA-KKIIVYSRDEL-KQSEMAMEFNDPRMRFF-IGDVRDLERLNYALEGVDICI 96 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCC-SEEEEEESCHH-HHHHHHHHHCCTTEEEE-ECCTTCHHHHHHHTTTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCC-CEEEEEECChh-hHHHHHHHhcCCCEEEE-ECCCCCHHHHHHHHhcCCEEE
Confidence 46788888887766555543 4444 42 26666654332 22334455543344332 223 45677788888887
Q ss_pred EceeeEec--------CCCeecccchHHHHHHHHhCCCcEEecccCCc
Q psy17541 599 IGAHALLS--------NGAVMSRAGTAQVSLVARAFNVPVLAACETHK 638 (717)
Q Consensus 599 LGAdaVla--------NG~VvNKiGT~~VALaAK~~~VPVyV~cEtyK 638 (717)
--|-.... .-.-.|-.||..++-+|..+++.-+|...+.+
T Consensus 97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~ 144 (344)
T 2gn4_A 97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDK 144 (344)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGG
T ss_pred ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCc
Confidence 66532110 00113668999999999999998777666543
No 115
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=60.41 E-value=1.4e+02 Score=29.72 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=53.1
Q ss_pred CCeEEEecCchHHHHHHHHHH----HcCCeeEEEEcCCCCchhHH-HHHHHHHhCCCcEEEEcc--------hHHHHHhh
Q psy17541 526 DDVILTYGCSSLVEKILLTAH----EKGTKFRVIIVDGSPWYEGK-EMLRRLVKHQVDCSYVLL--------SAVSYIMR 592 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~----e~Gk~FrVIVvESRP~~EGr-~lA~~L~~~GI~vTyI~D--------SAVsyiM~ 592 (717)
..+++|.|.+..+..++..+. ..|. +|++. .|.+.+. ..+..|...|+.+.++.. ..+-..+.
T Consensus 61 ~~v~~~~g~t~a~~~~~~~l~~~~~~~gd--~Vl~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~ 136 (382)
T 4eb5_A 61 GTVVFTSGATEANNLAIIGYAMRNARKGK--HILVS--AVEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLR 136 (382)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHGGGCC--EEEEE--TTCCHHHHHHHHHHTTTTCEEEEECBCTTSCBCHHHHHHHCC
T ss_pred CeEEEcCchHHHHHHHHHHHHhhccCCCC--EEEEC--CCcchHHHHHHHHHHhCCcEEEEeccCCCCccCHHHHHHHhc
Confidence 357777777776666665554 4453 45554 3445553 334445568999888863 12333332
Q ss_pred hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCc
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVP 629 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VP 629 (717)
.-.++|+-.+.-...|.++. --.|+-+|++|+++
T Consensus 137 ~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 170 (382)
T 4eb5_A 137 DDTILVSVQHANNEIGTIQP---VEEISEVLAGKAAL 170 (382)
T ss_dssp TTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSEE
T ss_pred CCCeEEEEeccCCCccccCC---HHHHHHHHHHCCCE
Confidence 21233333322223355554 24677888999887
No 116
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=60.19 E-value=64 Score=31.76 Aligned_cols=104 Identities=19% Similarity=0.292 Sum_probs=58.4
Q ss_pred eEEEecCchHHHHHHHH----HHHcCCeeEEEEcCCCCc-hh-HHHHHHHHHhCCCcEEEEc--chHHHHHh---h--hc
Q psy17541 528 VILTYGCSSLVEKILLT----AHEKGTKFRVIIVDGSPW-YE-GKEMLRRLVKHQVDCSYVL--LSAVSYIM---R--EV 594 (717)
Q Consensus 528 vILTyg~SStV~~vL~~----A~e~Gk~FrVIVvESRP~-~E-Gr~lA~~L~~~GI~vTyI~--DSAVsyiM---~--~V 594 (717)
+++-+..|..-...|.. |...+-.++|+-+...+. .+ -..+...|.+.|+++.+.. ......++ . ++
T Consensus 173 Ilv~~d~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~a~~~~~ 252 (294)
T 3loq_A 173 VLVAYDFSKWADRALEYAKFVVKKTGGELHIIHVSEDGDKTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAKREEINA 252 (294)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHTCEEEEEEECSSSCCHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHTTC
T ss_pred EEEEECCCHHHHHHHHHHHHHhhhcCCEEEEEEEccCchHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHHHHhcCc
Confidence 44556666544444444 334566777664433222 11 1356778888999866543 22222222 2 68
Q ss_pred cEEEEceeeEecCCCeecc-cchHHHHHHHHhCCCcEEeccc
Q psy17541 595 SKVIIGAHALLSNGAVMSR-AGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNK-iGT~~VALaAK~~~VPVyV~cE 635 (717)
|.|++|+..- |++-.. .|+..-. +.++..+||+|+=+
T Consensus 253 dLlV~G~~~~---~~~~~~~~Gs~~~~-vl~~~~~pvLvv~~ 290 (294)
T 3loq_A 253 TTIFMGSRGA---GSVMTMILGSTSES-VIRRSPVPVFVCKR 290 (294)
T ss_dssp SEEEEECCCC---SCHHHHHHHCHHHH-HHHHCSSCEEEECS
T ss_pred CEEEEeCCCC---CCccceeeCcHHHH-HHhcCCCCEEEECC
Confidence 9999999752 333222 4544444 44567899999744
No 117
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=59.85 E-value=1.1e+02 Score=28.41 Aligned_cols=35 Identities=6% Similarity=-0.182 Sum_probs=27.7
Q ss_pred HHHHHHHHhCCCcEEEEcchHHHHHhhh---ccEEEEc
Q psy17541 566 KEMLRRLVKHQVDCSYVLLSAVSYIMRE---VSKVIIG 600 (717)
Q Consensus 566 r~lA~~L~~~GI~vTyI~DSAVsyiM~~---VdkVLLG 600 (717)
..+++.+.+.|+++..|+++.-+.+.+. +|.+|.-
T Consensus 126 i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~~ 163 (196)
T 2yva_A 126 VKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRI 163 (196)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEEC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEEe
Confidence 4677888889999999999877777666 8887753
No 118
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=59.59 E-value=87 Score=31.18 Aligned_cols=100 Identities=13% Similarity=0.057 Sum_probs=56.9
Q ss_pred CCCeEEEecCchHHHHHHHHHHHc-----------CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEK-----------GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-------- 585 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~-----------Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-------- 585 (717)
...+++|.|-+..+..+|..+... +..-+|++.+ |.+.+.. ..+...|+.+.+++..
T Consensus 86 ~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~ 161 (397)
T 3f9t_A 86 DAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPI--TAHFSFE--KGREMMDLEYIYAPIKEDYTIDEK 161 (397)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEET--TCCTHHH--HHHHHHTCEEEEECBCTTSSBCHH
T ss_pred CCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECC--cchhHHH--HHHHHcCceeEEEeeCCCCcCCHH
Confidence 445688888877777776666543 1233555543 5555532 2233359998888632
Q ss_pred HHHHHhhh--ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 586 AVSYIMRE--VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 586 AVsyiM~~--VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.+-..+.+ ...|++-. .-...|.+.. -..|+-+|+.|+++|+|
T Consensus 162 ~l~~~i~~~~~~~v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 206 (397)
T 3f9t_A 162 FVKDAVEDYDVDGIIGIA-GTTELGTIDN---IEELSKIAKENNIYIHV 206 (397)
T ss_dssp HHHHHHHHSCCCEEEEEB-SCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHhhcCCeEEEEEC-CCCCCCCCCC---HHHHHHHHHHhCCeEEE
Confidence 33344443 44444332 2234454433 34577889999998876
No 119
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=59.42 E-value=1e+02 Score=30.53 Aligned_cols=97 Identities=12% Similarity=0.159 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHcCCeeEEE-EcCCCCch-------------------hHH----HHHHHHHhCCCcEEEEcc---hHHHH
Q psy17541 537 LVEKILLTAHEKGTKFRVI-IVDGSPWY-------------------EGK----EMLRRLVKHQVDCSYVLL---SAVSY 589 (717)
Q Consensus 537 tV~~vL~~A~e~Gk~FrVI-VvESRP~~-------------------EGr----~lA~~L~~~GI~vTyI~D---SAVsy 589 (717)
++...+..|...|..+.++ |++..|.. +++ .++..+...|++++.... .....
T Consensus 23 al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~g~~~~~ 102 (319)
T 3olq_A 23 ALRRAVYIVQRNGGRIKAFLPVYDLSYDMTTLLSPDERNAMRKGVINQKTAWIKQQARYYLEAGIQIDIKVIWHNRPYEA 102 (319)
T ss_dssp HHHHHHHHHHHHCCEEEEEEEECCGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEECSCHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEEEecccchhhccccChhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEEEecCChHHH
Confidence 4555566666667777765 44433320 111 123334457998877543 23333
Q ss_pred Hhh-----hccEEEEceeeEecCCCeecc-cchHHHHHHHHhCCCcEEecccCC
Q psy17541 590 IMR-----EVSKVIIGAHALLSNGAVMSR-AGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 590 iM~-----~VdkVLLGAdaVlaNG~VvNK-iGT~~VALaAK~~~VPVyV~cEty 637 (717)
++. .+|.|++|.+.- |++-.. .|+....++ ++.++||+|+-+..
T Consensus 103 i~~~a~~~~~DLiV~G~~g~---~~~~~~~~Gs~~~~vl-~~~~~PVlvv~~~~ 152 (319)
T 3olq_A 103 IIEEVITDKHDLLIKMAHQH---DKLGSLIFTPLDWQLL-RKCPAPVWMVKDKE 152 (319)
T ss_dssp HHHHHHHHTCSEEEEEEBCC-----CCSCBCCHHHHHHH-HHCSSCEEEEESSC
T ss_pred HHHHHHhcCCCEEEEecCcC---chhhcccccccHHHHH-hcCCCCEEEecCcc
Confidence 332 589999999863 222222 577665554 66689999997654
No 120
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=59.30 E-value=1.1e+02 Score=32.24 Aligned_cols=108 Identities=14% Similarity=0.146 Sum_probs=70.9
Q ss_pred HHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCC---------CCch-----hH----HHHHHHHHhC-
Q psy17541 515 ICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDG---------SPWY-----EG----KEMLRRLVKH- 575 (717)
Q Consensus 515 Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvES---------RP~~-----EG----r~lA~~L~~~- 575 (717)
++..+...|.+ ..||..|.+.+=..++......|.. ++.++|. |-.+ =| ..++++|.+.
T Consensus 26 ~G~~~q~~L~~-~~VlivG~GGlG~~ia~~La~~Gvg-~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~ln 103 (346)
T 1y8q_A 26 WGLEAQKRLRA-SRVLLVGLKGLGAEIAKNLILAGVK-GLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLN 103 (346)
T ss_dssp HCHHHHHHHHT-CEEEEECCSHHHHHHHHHHHHHTCS-EEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTC
T ss_pred hCHHHHHHHhC-CeEEEECCCHHHHHHHHHHHHcCCC-EEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHC
Confidence 56667777764 7889999988766777776666853 4444442 2111 13 3567778875
Q ss_pred -CCcEEEEcchH---HHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 576 -QVDCSYVLLSA---VSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 576 -GI~vTyI~DSA---VsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
+++++.+...- ...++...|.||.+.|.+ .--+.+.-.|+.+++|++.+
T Consensus 104 p~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~---------~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 104 PMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSR---------DVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp TTSEEEEECSCGGGCCHHHHTTCSEEEEESCCH---------HHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEEecccCcchHHHhcCCCEEEEcCCCH---------HHHHHHHHHHHHcCCCEEEE
Confidence 57777765421 345667899998876543 22356777889999999875
No 121
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=58.80 E-value=56 Score=36.67 Aligned_cols=115 Identities=10% Similarity=0.050 Sum_probs=68.6
Q ss_pred HHhh--ccCCCeEEEecCch----HHHHHHHHHHHcC-CeeEEEEcCCCCchhHH------------------HHHHHHH
Q psy17541 519 FHNK--LANDDVILTYGCSS----LVEKILLTAHEKG-TKFRVIIVDGSPWYEGK------------------EMLRRLV 573 (717)
Q Consensus 519 A~e~--I~dGdvILTyg~SS----tV~~vL~~A~e~G-k~FrVIVvESRP~~EGr------------------~lA~~L~ 573 (717)
|..+ |+||++|.+.|+.. ++..++....+++ +.++|+-....+...|. ...+++.
T Consensus 55 Av~~~~IkdG~tV~~gGf~g~P~~l~~~Li~AL~~r~~kdLtli~~s~g~~~~~l~~~~~~g~v~r~~~~~~g~~~r~~i 134 (519)
T 2hj0_A 55 AIEKTRLKDGMTISFHHHFREGDYVMNMVLDEIAKMGIKDISIAPSSIANVHEPLIDHIKNGVVTNITSSGLRDKVGAAI 134 (519)
T ss_dssp HHHHTTCCTTCEEEECCTTGGGBCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEEEEESBCHHHHHHHH
T ss_pred HHhcCCCCCCCEEEECCccCCchHHHHHHHHHHHhcCCCCeEEEeecCCCcchhHHhHhhcCcEEEEEecCCCcHHHHHH
Confidence 4556 99999999998864 2334444444434 55777765333221121 1134444
Q ss_pred hCC---CcEEEEcchHHHHHhh----hccEEEEceeeEecCCCeeccc-----chHHHHHHHHhCCCcEEec
Q psy17541 574 KHQ---VDCSYVLLSAVSYIMR----EVSKVIIGAHALLSNGAVMSRA-----GTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 574 ~~G---I~vTyI~DSAVsyiM~----~VdkVLLGAdaVlaNG~VvNKi-----GT~~VALaAK~~~VPVyV~ 633 (717)
..| +|+.|-......+++. .+|..|+.|...-.+|.+.-+. |+...+.++.....-|+|-
T Consensus 135 ~~G~~~~P~~l~~~gG~~~ll~~~~l~~DVAlI~as~aD~~Gnls~~~g~s~~~s~~~~~~~a~~A~~VIaE 206 (519)
T 2hj0_A 135 SEGIMENPVIIRSHGGRARAIATDDIHIDVAFLGAPSSDAYGNANGTRGKTTCGSLGYAMIDAKYADQVVIV 206 (519)
T ss_dssp HTTCCSSCEEECCHHHHHHHHHHTSSCCSEEEEEESEECTTSCEESSSSSSCCSCCHHHHHHHHHCSEEEEE
T ss_pred HCCCCCCCceeeccCCHHHHHhcCCCCCcEEEEEecccCCCCcEEEecCccccccchhhHHHHhhCCEEEEE
Confidence 555 4665543333777775 4899999999999999988322 3445555555555555543
No 122
>2jcb_A 5-formyltetrahydrofolate cyclo-ligase family PROT; folate metabolism; HET: ADP; 1.6A {Bacillus anthracis}
Probab=58.76 E-value=28 Score=34.13 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhh--ccCCCeEEEe----cCchHHHHHHHHHHHcCCeeEEEEc--CCCCc-----hhHHHHHHHHH--h
Q psy17541 510 MAGNAICMFFHNK--LANDDVILTY----GCSSLVEKILLTAHEKGTKFRVIIV--DGSPW-----YEGKEMLRRLV--K 574 (717)
Q Consensus 510 ~A~e~Ia~~A~e~--I~dGdvILTy----g~SStV~~vL~~A~e~Gk~FrVIVv--ESRP~-----~EGr~lA~~L~--~ 574 (717)
.+...|+++...+ +....+|+.| +--.+ ..++..+++.|+++-|=++ +++++ ..+. .|. .
T Consensus 34 ~~s~~i~~~l~~~~~~~~a~~I~~Y~~~~~Evdt-~~li~~~~~~gk~v~lP~~~~~~~~m~f~~~~~~~----~L~~g~ 108 (200)
T 2jcb_A 34 TLSEQIVFSLYEQKEWAEAKTIGITLSMENEVNT-YPIIEKAWKEGKRVVVPKCNKETRTMSFRQISNFD----QLETVY 108 (200)
T ss_dssp HHHHHHHHHHHTSHHHHHCSEEECCCCCTTSCCC-HHHHHHHHHTTCEEEEEEEETTTTEEEEEEESSGG----GEEEEE
T ss_pred HHHHHHHHHHHhChhhhcCCEEEEECCCCCCCCH-HHHHHHHHHCCCEEEEeEEEcCCCcEEEEEeCCCc----ccccCC
Confidence 3455566665543 3466899988 22223 5667778888886543223 22211 0111 121 2
Q ss_pred CCCcEEEEcchHH--HHHhhhccEEEEceeeEecCCCeecccchHHHHHHHH
Q psy17541 575 HQVDCSYVLLSAV--SYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR 624 (717)
Q Consensus 575 ~GI~vTyI~DSAV--syiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK 624 (717)
.||.- +.... ..-...+|.||+.+=++-.+|.=+..=|.|-=-.+|.
T Consensus 109 ~GI~E---P~~~~~~~~~~~~iDlvlVP~vAfD~~G~RLG~GgGyYDR~La~ 157 (200)
T 2jcb_A 109 MNLRE---PIPALTEEVNADEIDLQIVPGVAYTERGERIGYGGGYYDRYLVH 157 (200)
T ss_dssp TTEEE---ECGGGCEECCGGGCSEEECCCSEECTTSCEECSSSCHHHHHTTT
T ss_pred CCCCC---CCCcccccCCccCCCEEEECCeEECCCCCeeccCCchHHHHHhh
Confidence 46532 21111 0113578999999999999998777766654333443
No 123
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=58.18 E-value=64 Score=31.97 Aligned_cols=64 Identities=14% Similarity=0.058 Sum_probs=37.2
Q ss_pred HHHHHHhCCCc---EEEEcchHHHHHhh-----hccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEeccc
Q psy17541 568 MLRRLVKHQVD---CSYVLLSAVSYIMR-----EVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 568 lA~~L~~~GI~---vTyI~DSAVsyiM~-----~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~cE 635 (717)
+...+.+.|++ +.+........++. ++|.|++|++.- |++-. -.|+..-.+ .++..+||+|+=+
T Consensus 233 l~~~~~~~~~~~~~~~v~~g~~~~~I~~~a~~~~~dLiV~G~~g~---~~~~~~~~Gsv~~~v-l~~~~~pVLvv~~ 305 (319)
T 3olq_A 233 MKELRQKFSIPEEKTHVKEGLPEQVIPQVCEELNAGIVVLGILGR---TGLSAAFLGNTAEQL-IDHIKCDLLAIKP 305 (319)
T ss_dssp HHHHHHHTTCCGGGEEEEESCHHHHHHHHHHHTTEEEEEEECCSC---CSTHHHHHHHHHHHH-HTTCCSEEEEECC
T ss_pred HHHHHHHhCCCcccEEEecCCcHHHHHHHHHHhCCCEEEEeccCc---cCCccccccHHHHHH-HhhCCCCEEEECC
Confidence 34445667874 44444433333332 689999999752 33322 245544444 4667899999854
No 124
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=58.15 E-value=37 Score=34.42 Aligned_cols=104 Identities=13% Similarity=0.162 Sum_probs=60.4
Q ss_pred cCC-CeEEEecCchHHHHHHHHHHHcCC---eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch---------HHHHH
Q psy17541 524 AND-DVILTYGCSSLVEKILLTAHEKGT---KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS---------AVSYI 590 (717)
Q Consensus 524 ~dG-dvILTyg~SStV~~vL~~A~e~Gk---~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS---------AVsyi 590 (717)
... .+++|.|.+..+..++..+...|. +-+|++. .|.+.+... .+...|+.+..+... ++-..
T Consensus 89 ~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~--~p~~~~~~~--~~~~~g~~~~~v~~~~~g~~~d~~~l~~~ 164 (396)
T 3jtx_A 89 DADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSP--NPFYQIYEG--ATLLGGGEIHFANCPAPSFNPDWRSISEE 164 (396)
T ss_dssp CTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEE--ESCCHHHHH--HHHHTTCEEEEEECCTTTCCCCGGGSCHH
T ss_pred CCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEc--CCCcHhHHH--HHHHcCCEEEEeecCCCCCccCHHHHHHh
Confidence 345 788888887777666666644432 1355553 466766543 345579888887631 22222
Q ss_pred h-hhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 591 M-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 591 M-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+ +++..|+|- .---..|.++..---..++-+|+.|++.|++
T Consensus 165 ~~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 206 (396)
T 3jtx_A 165 VWKRTKLVFVC-SPNNPSGSVLDLDGWKEVFDLQDKYGFIIAS 206 (396)
T ss_dssp HHHTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_pred hccCcEEEEEE-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 2 245555552 2223346555555445577888999998876
No 125
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=58.13 E-value=89 Score=27.50 Aligned_cols=102 Identities=15% Similarity=0.192 Sum_probs=55.5
Q ss_pred eEEEec--CchHHHHHHHHH----HHcCCeeEEE-EcCCCCc---------------hhHH----HHHHHHHhCCCc-EE
Q psy17541 528 VILTYG--CSSLVEKILLTA----HEKGTKFRVI-IVDGSPW---------------YEGK----EMLRRLVKHQVD-CS 580 (717)
Q Consensus 528 vILTyg--~SStV~~vL~~A----~e~Gk~FrVI-VvESRP~---------------~EGr----~lA~~L~~~GI~-vT 580 (717)
+++-+. .|..-...|..| ...|-.+.++ |.+..+. .+++ .+...+...|++ ++
T Consensus 18 ILv~vD~~~s~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~ 97 (156)
T 3fg9_A 18 ILLTVDEDDNTSSERAFRYATTLAHDYDVPLGICSVLESEDINIFDSLTPSKIQAKRKHVEDVVAEYVQLAEQRGVNQVE 97 (156)
T ss_dssp EEEECCSCCCHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEE
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHhcCCEEEEEEEEeCCCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCceE
Confidence 444456 665544555444 3346666544 6665442 1122 223345567984 54
Q ss_pred EEcch------HHHHH-h--hhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 581 YVLLS------AVSYI-M--REVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 581 yI~DS------AVsyi-M--~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
..... ++..+ . .++|.|++|++.--. +---.|+..-.+ .++..+||+|+
T Consensus 98 ~~v~~~g~~~~~I~~~~a~~~~~DlIV~G~~g~~~---~~~~~Gs~~~~v-l~~a~~PVlvV 155 (156)
T 3fg9_A 98 PLVYEGGDVDDVILEQVIPEFKPDLLVTGADTEFP---HSKIAGAIGPRL-ARKAPISVIVV 155 (156)
T ss_dssp EEEEECSCHHHHHHHTHHHHHCCSEEEEETTCCCT---TSSSCSCHHHHH-HHHCSSEEEEE
T ss_pred EEEEeCCCHHHHHHHHHHHhcCCCEEEECCCCCCc---cceeecchHHHH-HHhCCCCEEEe
Confidence 43322 23333 2 357999999986422 222467765444 46678999986
No 126
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=57.84 E-value=15 Score=35.54 Aligned_cols=55 Identities=15% Similarity=0.117 Sum_probs=37.4
Q ss_pred EEEecCc-hHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc
Q psy17541 529 ILTYGCS-SLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL 584 (717)
Q Consensus 529 ILTyg~S-StV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D 584 (717)
|.+|..+ .-|...|..|+++|..++|++....-... ......|...||++.+...
T Consensus 64 i~~y~~~~~~i~~aL~~aa~rGV~Vrii~D~~~~~~~-~~~~~~l~~~gi~v~~~~~ 119 (196)
T 4ggj_A 64 LCLFAFSSPQLGRAVQLLHQRGVRVRVITDCDYMALN-GSQIGLLRKAGIQVRHDQD 119 (196)
T ss_dssp EEESCBCCHHHHHHHHHHHHTTCEEEEEESSCCC----CCHHHHHHHTTCEEEECCS
T ss_pred EEEEEeCCHHHHHHHHHHHHcCCcEEEEEeccccccc-HHHHHHHHhcCCCcccccc
Confidence 4556544 45788899999999999998854332222 2346789999999876543
No 127
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=57.63 E-value=79 Score=31.94 Aligned_cols=102 Identities=10% Similarity=0.004 Sum_probs=54.3
Q ss_pred CCCeEE--EecCchHHHHHHHHHH--HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc---h-------HHHHH
Q psy17541 525 NDDVIL--TYGCSSLVEKILLTAH--EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL---S-------AVSYI 590 (717)
Q Consensus 525 dGdvIL--Tyg~SStV~~vL~~A~--e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D---S-------AVsyi 590 (717)
...+++ |.|.+..+..++..+. ..|. +|++. .|.+.|...+ +...|+.+..+.. . ++-..
T Consensus 92 ~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd--~Vl~~--~p~y~~~~~~--~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 165 (396)
T 2q7w_A 92 DKRARTAQTPGGTGALRVAADFLAKNTSVK--RVWVS--NPSWPNHKSV--FNSAGLEVREYAYYDAENHTLDFDALINS 165 (396)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHHHHHSCCC--EEEEE--ESCCTHHHHH--HHHTTCEEEEEECEETTTTEECHHHHHHH
T ss_pred cccEEEEecccchhhHHHHHHHHHHhCCCC--EEEEc--CCCchhHHHH--HHHcCCceEEEecccCCCCCcCHHHHHHH
Confidence 445666 7777777666554432 2343 45554 3666664333 3447888777753 1 23333
Q ss_pred hhh---ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 591 MRE---VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 591 M~~---VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+.+ -+++++=..---..|.++..-=-..++-+|+.|++.|++
T Consensus 166 l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 210 (396)
T 2q7w_A 166 LNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLF 210 (396)
T ss_dssp HTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 332 134443222222335444432233577788889988776
No 128
>1ydm_A Hypothetical protein YQGN; northeast structural genomics, SR44, X-RAY, PSI, protein structure initiative; 2.50A {Bacillus subtilis}
Probab=57.52 E-value=30 Score=33.27 Aligned_cols=104 Identities=11% Similarity=0.060 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhh--ccCCCeEEEec-Cch--HHHHHHHHHHHcCCeeEEEEc--CCCCc-----hhHHHHHHHHHhCCCc
Q psy17541 511 AGNAICMFFHNK--LANDDVILTYG-CSS--LVEKILLTAHEKGTKFRVIIV--DGSPW-----YEGKEMLRRLVKHQVD 578 (717)
Q Consensus 511 A~e~Ia~~A~e~--I~dGdvILTyg-~SS--tV~~vL~~A~e~Gk~FrVIVv--ESRP~-----~EGr~lA~~L~~~GI~ 578 (717)
+...|+++...+ +....+|+.|- ..+ -...++..+++.|+++-|=++ ..+.+ ..+..| .-...||.
T Consensus 24 ~s~~i~~~l~~~~~~~~a~~I~~y~~~~~Evdt~~li~~~~~~gk~v~lP~~~~~~~~m~f~~~~~~~~L--~~~~~gi~ 101 (187)
T 1ydm_A 24 KTERMYKYLFSLPEWQNAGTIAVTISRGLEIPTRPVIEQAWEEGKQVCIPKCHPDTKKMQFRTYQTDDQL--ETVYAGLL 101 (187)
T ss_dssp HHHHHHHHHHTSHHHHTCSEEECCCCCTTSCCCHHHHHHHHHTTCEEEEECC---CCCCCEEECCCCTTH--HHHHTTSC
T ss_pred HHHHHHHHHHhCHHhhhCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEeEEecCCCcEEEEEeCCCCcc--CcCCCCCC
Confidence 455566666554 45778999982 211 125667778888875433223 22211 111112 12356774
Q ss_pred EEEEcchHHHHHhhhccEEEEceeeEecCCCeecccchH
Q psy17541 579 CSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTA 617 (717)
Q Consensus 579 vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~ 617 (717)
--.- ...-..-...+|.||+.+=++-.+|.=+..=|.|
T Consensus 102 EP~~-~~~~~~~~~~iDlvivP~vafD~~G~RLG~GgGy 139 (187)
T 1ydm_A 102 EPVI-EKTKEVNPSQIDLMIVPGVCFDVNGFRVGFGGGY 139 (187)
T ss_dssp CCC---CCCCCCGGGCCEEECCCSEEETTSCEECCSCCS
T ss_pred CCCC-cccccCCccCCCEEEeCCeEECCCCCcccCCccH
Confidence 2110 0000001357899999999999999755554443
No 129
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=57.33 E-value=63 Score=33.43 Aligned_cols=92 Identities=21% Similarity=0.163 Sum_probs=58.1
Q ss_pred CeEEEecCc---hHHHHHHHHHHHc---CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-chHHHHHhhhccEEEE
Q psy17541 527 DVILTYGCS---SLVEKILLTAHEK---GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-LSAVSYIMREVSKVII 599 (717)
Q Consensus 527 dvILTyg~S---StV~~vL~~A~e~---Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-DSAVsyiM~~VdkVLL 599 (717)
.+||++|-| ..+...+..|... ...+.|++.-++... ..+...+...++++.+.. ..-+..+|..+|.||.
T Consensus 181 ~~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~~--~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDlvI~ 258 (365)
T 3s2u_A 181 VNLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQHA--EITAERYRTVAVEADVAPFISDMAAAYAWADLVIC 258 (365)
T ss_dssp CEEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTTH--HHHHHHHHHTTCCCEEESCCSCHHHHHHHCSEEEE
T ss_pred cEEEEECCcCCccccchhhHHHHHhcccccceEEEEecCcccc--ccccceecccccccccccchhhhhhhhccceEEEe
Confidence 478888765 3455666666542 345666655444333 245567778888888765 3458888999998752
Q ss_pred ceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 600 GAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 600 GAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
+.|...++ =|-.+|+|++++-
T Consensus 259 -------------raG~~Tv~-E~~a~G~P~Ilip 279 (365)
T 3s2u_A 259 -------------RAGALTVS-ELTAAGLPAFLVP 279 (365)
T ss_dssp -------------CCCHHHHH-HHHHHTCCEEECC
T ss_pred -------------cCCcchHH-HHHHhCCCeEEec
Confidence 34544444 3445799988753
No 130
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=57.33 E-value=29 Score=34.15 Aligned_cols=96 Identities=15% Similarity=0.080 Sum_probs=53.5
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMR--EVSK 596 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~--~Vdk 596 (717)
.+++|.|.+..+..++..+.. =+|++.+ |.+-|..+...+...|+.+..+.. ..+-..+. ++..
T Consensus 54 ~v~~t~g~t~a~~~~~~~~~~----d~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~ 127 (353)
T 2yrr_A 54 VAALAGSGSLGMEAGLANLDR----GPVLVLV--NGAFSQRVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRM 127 (353)
T ss_dssp EEEESSCHHHHHHHHHHTCSC----CCEEEEE--CSHHHHHHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSE
T ss_pred eEEEcCCcHHHHHHHHHHhcC----CcEEEEc--CCCchHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCE
Confidence 466666666665555544322 2466553 334443334445668998888762 23333333 3445
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++ .+.-...|.++. -..++-+|+.||+++++
T Consensus 128 v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 159 (353)
T 2yrr_A 128 VAL-VHGETSTGVLNP---AEAIGALAKEAGALFFL 159 (353)
T ss_dssp EEE-ESEETTTTEECC---HHHHHHHHHHHTCEEEE
T ss_pred EEE-EccCCCcceecC---HHHHHHHHHHcCCeEEE
Confidence 544 333334566655 24677788999987775
No 131
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=57.03 E-value=37 Score=36.58 Aligned_cols=98 Identities=10% Similarity=0.051 Sum_probs=57.3
Q ss_pred EEEecCchHHHHHHHHHHHcCC------eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhhhc
Q psy17541 529 ILTYGCSSLVEKILLTAHEKGT------KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMREV 594 (717)
Q Consensus 529 ILTyg~SStV~~vL~~A~e~Gk------~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~~V 594 (717)
++|.|-+..+..+|..+...|. +-+|++ +.|.+.+. ...+...|+.+..+.. .++-..+.+-
T Consensus 164 ~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~--~~~~~~~~--~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~ 239 (514)
T 3mad_A 164 TVTSGGTESLLLAMKTYRDWARATKGITAPEAVV--PVSAHAAF--DKAAQYFGIKLVRTPLDADYRADVAAMREAITPN 239 (514)
T ss_dssp EEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEE--ETTSCTHH--HHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTT
T ss_pred EEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEE--eCccchHH--HHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccC
Confidence 8888887777777776654431 135665 34555553 2333345888888863 2344444432
Q ss_pred cEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 595 SKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
.++|+...--...|.+.. --.|+-+|+.||++|+|=
T Consensus 240 ~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livD 275 (514)
T 3mad_A 240 TVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVD 275 (514)
T ss_dssp EEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEE
T ss_pred CEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEe
Confidence 344443333223455544 256888899999999873
No 132
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=56.86 E-value=51 Score=34.11 Aligned_cols=103 Identities=17% Similarity=0.276 Sum_probs=57.5
Q ss_pred ccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHH-hCCCcEEEEcch----------HHHHHh
Q psy17541 523 LANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLV-KHQVDCSYVLLS----------AVSYIM 591 (717)
Q Consensus 523 I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~-~~GI~vTyI~DS----------AVsyiM 591 (717)
+....+++|-|.+..+..++..+...|. +|++. +|.+.|... .+. ..|+.+..++.. ++-..+
T Consensus 106 ~~~~~i~~~~G~~~ai~~~~~~~~~~gd--~Vl~~--~p~y~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l 179 (428)
T 1iay_A 106 FDPERVVMAGGATGANETIIFCLADPGD--AFLVP--SPYYPAFNR--DLRWRTGVQLIPIHCESSNNFKITSKAVKEAY 179 (428)
T ss_dssp CCTTSCEEEEHHHHHHHHHHHHHCCTTC--EEEEE--SSCCTTHHH--HTTTTTCCEEEEECCCTTTTTCCCHHHHHHHH
T ss_pred CChhhEEEccChHHHHHHHHHHhCCCCC--eEEEc--cCCCcchHH--HHHHhcCCEEEEeecCCccCCcCCHHHHHHHH
Confidence 3345688888888777666665543443 45554 466766432 132 468888877531 222233
Q ss_pred h-------hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 592 R-------EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 592 ~-------~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
. ++..|++ ..--...|.++..-=-..++-+|+.++++|+|
T Consensus 180 ~~~~~~~~~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 226 (428)
T 1iay_A 180 ENAQKSNIKVKGLIL-TNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVC 226 (428)
T ss_dssp HHHHHTTCCEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHhcCCceEEEEE-cCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEE
Confidence 2 2444544 22222245555433234566778899998776
No 133
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=56.83 E-value=12 Score=39.02 Aligned_cols=105 Identities=16% Similarity=0.180 Sum_probs=73.7
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhC-CCcEEEEcchHHHHHhhhccEEEEceee
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKH-QVDCSYVLLSAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~-GI~vTyI~DSAVsyiM~~VdkVLLGAda 603 (717)
+-|+++.+-....+..++.++.+.|.+.-|++.+.-|..+-+.+.+.+.+. |+. +|-.+.++.+.+...+...-+..
T Consensus 71 ~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~--liGPnc~Gii~p~~~~~~~~~~~ 148 (305)
T 2fp4_A 71 GATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR--LIGPNCPGVINPGECKIGIMPGH 148 (305)
T ss_dssp CCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE--EECSSSCEEEETTTEEEESSCGG
T ss_pred CCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHhcCCcE--EEeCCCCeEecccccceeecccc
Confidence 457877777888889999999999987777788877766556777888788 875 57677777766654332211122
Q ss_pred EecCC--CeecccchHHHHHH--HHhCCCcEE
Q psy17541 604 LLSNG--AVMSRAGTAQVSLV--ARAFNVPVL 631 (717)
Q Consensus 604 VlaNG--~VvNKiGT~~VALa--AK~~~VPVy 631 (717)
+..-| +++++.||+..+++ +...++.|-
T Consensus 149 ~~~~G~va~vSqSG~l~~~~~~~~~~~g~G~S 180 (305)
T 2fp4_A 149 IHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQS 180 (305)
T ss_dssp GCCEEEEEEEESCSHHHHHHHHHHHHTTCCEE
T ss_pred CCCCCCEEEEecchHHHHHHHHHHHhcCCCee
Confidence 22234 68999999988876 556777765
No 134
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=56.33 E-value=1.7e+02 Score=29.44 Aligned_cols=100 Identities=17% Similarity=0.159 Sum_probs=53.6
Q ss_pred CeEEEecCchHHHHHHHHHH----HcCCeeEEEEcCCCCchhHH-HHHHHHHhCCCcEEEEcch--------HHHHHhhh
Q psy17541 527 DVILTYGCSSLVEKILLTAH----EKGTKFRVIIVDGSPWYEGK-EMLRRLVKHQVDCSYVLLS--------AVSYIMRE 593 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~----e~Gk~FrVIVvESRP~~EGr-~lA~~L~~~GI~vTyI~DS--------AVsyiM~~ 593 (717)
.+++|-|.+..+..++..+. ..|. ..|++.+ |.+.+. ..+..+...|+.+.++... ++-..+.+
T Consensus 82 ~v~~~~g~t~al~~~~~~l~~~~~~~gd-~~Vl~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 158 (400)
T 3vax_A 82 ELIFTSGATESNNIALLGLAPYGERTGR-RHIITSA--IEHKAVLEPLEHLAGRGFEVDFLTPGPSGRISVEGVMERLRP 158 (400)
T ss_dssp GEEEESCHHHHHHHHHHTTHHHHHHHTC-CEEEEET--TSCHHHHHHHHHHHTTTCEEEEECCCTTCCCCHHHHHTTCCT
T ss_pred cEEEeCCHHHHHHHHHHHHHHhhccCCC-CEEEECc--cccHhHHHHHHHHHhcCCeEEEEccCCCCCcCHHHHHHhcCC
Confidence 57777777776666555443 3443 1556543 333332 3344455689999988743 22222222
Q ss_pred ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 594 VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 594 VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
=.++++=...--..|.++. --.|+-+|+.+|++|+|
T Consensus 159 ~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~ 194 (400)
T 3vax_A 159 DTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHV 194 (400)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEE
T ss_pred CceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEE
Confidence 1233322222222344443 25678889999998886
No 135
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=56.11 E-value=82 Score=31.35 Aligned_cols=96 Identities=14% Similarity=0.119 Sum_probs=56.0
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--ch--------HHHHHhh----
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--LS--------AVSYIMR---- 592 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--DS--------AVsyiM~---- 592 (717)
.+++|.|.+..+..+|..+...| -+|++. .|.+.|...+ +...|+.+.++. .. .+-..+.
T Consensus 71 ~v~~~~g~t~a~~~~~~~~~~~g--d~vl~~--~~~~~~~~~~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~ 144 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSLAKKD--AWVVMD--ENCHYSSYVA--AERAGLNIALVPKTDYPDYAITPENFAQTIEETKK 144 (371)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--TTCCHHHHHH--HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTT
T ss_pred EEEEeCChHHHHHHHHHHHhCCC--CEEEEc--cCcchHHHHH--HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcc
Confidence 56666666667666666554333 245554 4566665444 566899988887 22 3334443
Q ss_pred --hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 --EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 --~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++..|++ .+.-...|.++.. ..|+-+|+.||++|++
T Consensus 145 ~~~~~~v~~-~~~~nptG~~~~~---~~i~~~~~~~~~~li~ 182 (371)
T 2e7j_A 145 RGEVVLALI-TYPDGNYGNLPDV---KKIAKVCSEYDVPLLV 182 (371)
T ss_dssp TSCEEEEEE-ESSCTTTCCCCCH---HHHHHHHHTTTCCEEE
T ss_pred cCCeEEEEE-ECCCCCCcccCCH---HHHHHHHHHcCCeEEE
Confidence 2323322 2222334555542 6788889999999887
No 136
>3cdk_A Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis}
Probab=56.09 E-value=40 Score=33.90 Aligned_cols=43 Identities=16% Similarity=0.237 Sum_probs=29.6
Q ss_pred hccEEEEceeeEecCCCeecc--cc--hHHHHHHHHhCCCcEEecccCCcccc
Q psy17541 593 EVSKVIIGAHALLSNGAVMSR--AG--TAQVSLVARAFNVPVLAACETHKFCE 641 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNK--iG--T~~VALaAK~~~VPVyV~cEtyKFs~ 641 (717)
.+|..|+-|...-.+|.+.-. .+ ...+|++|+ +|+++.-+..+
T Consensus 151 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~a~aAk------~VIveVn~~vp 197 (241)
T 3cdk_A 151 TGDVAIVKAWKADTMGNLIFRKTARNFNPIAAMAGK------ITIAEAEEIVE 197 (241)
T ss_dssp CEEEEEEEEEEEETTCCEECCGGGCTTHHHHHHHEE------EEEEEEEEEEC
T ss_pred CCcEEEEEeccCCCCCeEEEecCchhhHHHHHHhCC------EEEEEEeCCCC
Confidence 589999999999999997765 22 344555565 55555544444
No 137
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=55.98 E-value=83 Score=31.26 Aligned_cols=59 Identities=12% Similarity=0.227 Sum_probs=37.7
Q ss_pred CCcEEEEcc-----hHHHHHhhhccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEecccCCc
Q psy17541 576 QVDCSYVLL-----SAVSYIMREVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAACETHK 638 (717)
Q Consensus 576 GI~vTyI~D-----SAVsyiM~~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~cEtyK 638 (717)
|++++.... ..+..+..++|.|++|.+.- |++-. -.|+..-.++ ++.++||+|+-+.+.
T Consensus 100 ~~~~~~~~~~g~~~~~I~~~a~~~DliV~G~~g~---~~~~~~~~Gs~~~~vl-~~~~~PVlvv~~~~~ 164 (309)
T 3cis_A 100 PPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLGS---GRWPGRLLGSVSSGLL-RHAHCPVVIIHDEDS 164 (309)
T ss_dssp CSCEEEEEESSCHHHHHHHHGGGEEEEEEESSCT---TCCTTCCSCHHHHHHH-HHCSSCEEEECTTCC
T ss_pred CceEEEEEecCCHHHHHHHHhcCCCEEEECCCCC---ccccccccCcHHHHHH-HhCCCCEEEEcCCcc
Confidence 888877542 22333345899999999752 22222 2576555544 555999999976654
No 138
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=55.94 E-value=36 Score=30.57 Aligned_cols=101 Identities=19% Similarity=0.206 Sum_probs=56.7
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--c-hHHHHH-hhhccEEEEce
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--L-SAVSYI-MREVSKVIIGA 601 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--D-SAVsyi-M~~VdkVLLGA 601 (717)
+..|+..|++.+-..+...+.+.| +.|+++|.+|... ...+..+...|+.+.+.. | ..+... +.++|.||+..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g--~~V~vid~~~~~~-~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRG--QNVTVISNLPEDD-IKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCHHH-HHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CCEEEEECCChHH-HHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 356788899887677777666656 5677777765211 112233344677654422 1 122222 56778777654
Q ss_pred eeEecCCCeecccchHHHHHHHHhC-C-CcEEecccCCc
Q psy17541 602 HALLSNGAVMSRAGTAQVSLVARAF-N-VPVLAACETHK 638 (717)
Q Consensus 602 daVlaNG~VvNKiGT~~VALaAK~~-~-VPVyV~cEtyK 638 (717)
+. ..-...+++.|+.. + .++++.+....
T Consensus 80 ~~---------d~~n~~~~~~a~~~~~~~~ii~~~~~~~ 109 (153)
T 1id1_A 80 DN---------DADNAFVVLSAKDMSSDVKTVLAVSDSK 109 (153)
T ss_dssp SC---------HHHHHHHHHHHHHHTSSSCEEEECSSGG
T ss_pred CC---------hHHHHHHHHHHHHHCCCCEEEEEECCHH
Confidence 32 22346677888875 4 45555554443
No 139
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=55.82 E-value=49 Score=34.44 Aligned_cols=97 Identities=14% Similarity=0.136 Sum_probs=55.5
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHH-HHHHhCCCcEEEEcchH---HHHHhh-hccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EML-RRLVKHQVDCSYVLLSA---VSYIMR-EVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA-~~L~~~GI~vTyI~DSA---VsyiM~-~VdkVLLG 600 (717)
++|+|-|-+..+..+|..+...|. +|++ +.|.+.|. .++ ..+...|+.++++.... +-..+. ++..|++
T Consensus 83 ~~~~~~sGt~A~~~al~~~~~~gd--~Vi~--~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 157 (392)
T 3qhx_A 83 FGRAFSSGMAAADCALRAMLRPGD--HVVI--PDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWV- 157 (392)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTC--EEEE--ETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEE-
T ss_pred cEEEECCHHHHHHHHHHHHhCCCC--EEEE--eCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEE-
Confidence 466666666666666665544443 5555 34666653 333 34466899999997433 333343 3444443
Q ss_pred eeeEec-CCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALLS-NGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVla-NG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+.+.. .|.+.. -..|+-+|+++|++|+|
T Consensus 158 -~~~~nptG~~~~---l~~i~~la~~~g~~li~ 186 (392)
T 3qhx_A 158 -ETPTNPLLSIAD---IAGIAQLGADSSAKVLV 186 (392)
T ss_dssp -ESSCTTTCCCCC---HHHHHHHHHHHTCEEEE
T ss_pred -ECCCCCCcEEec---HHHHHHHHHHcCCEEEE
Confidence 22222 233322 35688889999998887
No 140
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=55.78 E-value=19 Score=34.73 Aligned_cols=94 Identities=14% Similarity=0.126 Sum_probs=55.8
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH----HHHH-hhhccEEEE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA----VSYI-MREVSKVII 599 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA----Vsyi-M~~VdkVLL 599 (717)
....|+..|++.+-..+...+.+. .+ |+++|..|.. +..|. .|+.+.+ -|.. +... +.++|.||+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~~-----~~~~~-~~~~~i~-gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGS--EV-FVLAEDENVR-----KKVLR-SGANFVH-GDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGGH-----HHHHH-TTCEEEE-SCTTCHHHHHHTTCTTCSEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHHH-----HHHHh-cCCeEEE-cCCCCHHHHHhcCcchhcEEEE
Confidence 346789999988766666665443 35 8888877652 34445 7776543 2322 2222 567787776
Q ss_pred ceeeEecCCCeecccchHHHHHHHHhCCCc--EEecccCC
Q psy17541 600 GAHALLSNGAVMSRAGTAQVSLVARAFNVP--VLAACETH 637 (717)
Q Consensus 600 GAdaVlaNG~VvNKiGT~~VALaAK~~~VP--VyV~cEty 637 (717)
..+ +..-...+++.|+.++.. +++-+...
T Consensus 78 ~~~---------~d~~n~~~~~~a~~~~~~~~iia~~~~~ 108 (234)
T 2aef_A 78 DLE---------SDSETIHCILGIRKIDESVRIIAEAERY 108 (234)
T ss_dssp CCS---------CHHHHHHHHHHHHHHCSSSEEEEECSSG
T ss_pred cCC---------CcHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 532 224456788999998765 44444433
No 141
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=55.74 E-value=49 Score=33.60 Aligned_cols=101 Identities=16% Similarity=0.199 Sum_probs=55.7
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-----------SAVSYIMR- 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-----------SAVsyiM~- 592 (717)
...+++|.|.+..+..++..+...|. +|++. .|.+.|...+ +...|+.+..++. .++-..+.
T Consensus 87 ~~~v~~t~g~~~al~~~~~~l~~~gd--~vl~~--~p~y~~~~~~--~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~ 160 (390)
T 1d2f_A 87 SQTVVYGPSVIYMVSELIRQWSETGE--GVVIH--TPAYDAFYKA--IEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK 160 (390)
T ss_dssp GGGEEEESCHHHHHHHHHHHSSCTTC--EEEEE--ESCCHHHHHH--HHHTTCEEEEEECEECSSSEECCHHHHHHHHTS
T ss_pred HHHEEEcCCHHHHHHHHHHHhcCCCC--EEEEc--CCCcHHHHHH--HHHCCCEEEEeecccCCCccccCHHHHHHHhcc
Confidence 34578887777776666665533342 45553 3667664332 3456887776642 12333333
Q ss_pred -hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 -EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++..|+|- .--...|.++..-=-..|+-+|+.||++|++
T Consensus 161 ~~~~~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 200 (390)
T 1d2f_A 161 PECKIMLLC-SPQNPTGKVWTCDELEIMADLCERHGVRVIS 200 (390)
T ss_dssp TTEEEEEEE-SSCTTTCCCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEe-CCCCCCCcCcCHHHHHHHHHHHHHcCCEEEE
Confidence 34455542 2222235554432234567788999998876
No 142
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=55.74 E-value=65 Score=33.66 Aligned_cols=102 Identities=13% Similarity=0.154 Sum_probs=53.7
Q ss_pred CCeEEEecCchHHHHHHHHHHH-------cCCeeEEEEcCCCCchhHHH-HHHHHH-----hCCC-----cEEEEcc---
Q psy17541 526 DDVILTYGCSSLVEKILLTAHE-------KGTKFRVIIVDGSPWYEGKE-MLRRLV-----KHQV-----DCSYVLL--- 584 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e-------~Gk~FrVIVvESRP~~EGr~-lA~~L~-----~~GI-----~vTyI~D--- 584 (717)
..+++|-|-+..+..+|+.+.. .|+ -+|++.+ |.+.|.. .+..+. ..|. .+..++.
T Consensus 115 ~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~-~~vi~~~--~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~ 191 (420)
T 2pb2_A 115 ERVLFMNSGTEANETAFKLARHYACVRHSPFK-TKIIAFH--NAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDL 191 (420)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTC-CEEEEET--TCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTTCH
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHhhhccCCCC-CEEEEEe--CCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCCCH
Confidence 4577887777777777776643 343 3677665 5555531 222221 1111 2566642
Q ss_pred hHHHHHhh-hccEEEEceeeEecCCCe--ecccchHHHHHHHHhCCCcEEe
Q psy17541 585 SAVSYIMR-EVSKVIIGAHALLSNGAV--MSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 585 SAVsyiM~-~VdkVLLGAdaVlaNG~V--vNKiGT~~VALaAK~~~VPVyV 632 (717)
.++-..+. ++-.|++ +.+...|++ +..-=--.|+-+|+.||+.+++
T Consensus 192 ~~le~~i~~~~~~vi~--~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~ 240 (420)
T 2pb2_A 192 HAVKAVMDDHTCAVVV--EPIQGEGGVQAATPEFLKGLRDLCDEHQALLVF 240 (420)
T ss_dssp HHHHHHCCTTEEEEEE--CSEETTTTSEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhccCceEEEE--eCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEE
Confidence 23444443 3333433 445445554 2222234577788999998776
No 143
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=55.62 E-value=91 Score=31.65 Aligned_cols=96 Identities=10% Similarity=0.056 Sum_probs=52.5
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc---hHHHHHhh-------hccE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL---SAVSYIMR-------EVSK 596 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D---SAVsyiM~-------~Vdk 596 (717)
+.|++-+-|..+..+|..+...|. .|++. .|.+.+. ...+...|+++..+.. ..+-..+. ++..
T Consensus 107 ~~i~~~sGs~a~~~~~~~~~~~gd--~v~~~--~~~~~~~--~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 180 (401)
T 1fc4_A 107 DAILYSSCFDANGGLFETLLGAED--AIISD--ALNHASI--IDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVL 180 (401)
T ss_dssp EEEEESCHHHHHHTTHHHHCCTTC--EEEEE--TTCCHHH--HHHHHTSCSEEEEECTTCHHHHHHHHHHHHHTTCSSEE
T ss_pred cEEEeCChHHHHHHHHHHHcCCCC--EEEEc--chhHHHH--HHHHHHcCCceEEECCCCHHHHHHHHHHhhccCCCceE
Confidence 455554435555544444433332 45543 3444332 2346678999888852 33444444 3445
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++ ...--..|.++. -..|+-+|+.++++|++
T Consensus 181 v~~-~~~~nptG~~~~---~~~i~~l~~~~~~~li~ 212 (401)
T 1fc4_A 181 IAT-DGVFSMDGVIAN---LKGVCDLADKYDALVMV 212 (401)
T ss_dssp EEE-ESEETTTTEECC---HHHHHHHHHHTTEEEEE
T ss_pred EEE-eCCcCCCCCCCC---HHHHHHHHHHcCCEEEE
Confidence 554 333334565555 46678889999987776
No 144
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=55.59 E-value=11 Score=37.60 Aligned_cols=86 Identities=13% Similarity=0.040 Sum_probs=50.3
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH---HHHHhhhccEEEEceeeEecCCCe-eccc-chHHHHHHHH
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA---VSYIMREVSKVIIGAHALLSNGAV-MSRA-GTAQVSLVAR 624 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA---VsyiM~~VdkVLLGAdaVlaNG~V-vNKi-GT~~VALaAK 624 (717)
...+|.|+.-.|...-..+.+.|...|+++.++.... +...+..+|.+||.--.....|.. +... +...+..-|.
T Consensus 11 ~~~~~~~i~~~~~~~~~~i~~~l~~~G~~v~v~~~~~~~~~~~~l~~~Dglil~GG~~~~~~~~~~~~l~~~~~~i~~~~ 90 (239)
T 1o1y_A 11 HHVRVLAIRHVEIEDLGMMEDIFREKNWSFDYLDTPKGEKLERPLEEYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEIL 90 (239)
T ss_dssp CCCEEEEECSSTTSSCTHHHHHHHHTTCEEEEECGGGTCCCSSCGGGCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHH
T ss_pred ceeEEEEEECCCCCCchHHHHHHHhCCCcEEEeCCcCccccccchhcCCEEEECCCCccccCCccChhHHHHHHHHHHHH
Confidence 5678888888887666678889999999999776433 222345677776643111111110 1111 1222222344
Q ss_pred hCCCcEEeccc
Q psy17541 625 AFNVPVLAACE 635 (717)
Q Consensus 625 ~~~VPVyV~cE 635 (717)
..++||+-+|-
T Consensus 91 ~~~~PiLGIC~ 101 (239)
T 1o1y_A 91 KKEIPFLGICL 101 (239)
T ss_dssp HHTCCEEEETH
T ss_pred HCCCCEEEEch
Confidence 56899997764
No 145
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=55.56 E-value=64 Score=32.53 Aligned_cols=99 Identities=15% Similarity=0.104 Sum_probs=55.8
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHh-hhccEE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIM-REVSKV 597 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM-~~VdkV 597 (717)
.+++|-|.+..+..++......|. +|++. .|.+.|...+ +...|+.+..++. ..+-..+ .++..|
T Consensus 89 ~v~~~~g~~~a~~~~~~~l~~~gd--~vl~~--~p~y~~~~~~--~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v 162 (376)
T 2dou_A 89 EALALIGSQEGLAHLLLALTEPED--LLLLP--EVAYPSYFGA--ARVASLRTFLIPLREDGLADLKAVPEGVWREAKVL 162 (376)
T ss_dssp SEEEESSHHHHHHHHHHHHCCTTC--EEEEE--SSCCHHHHHH--HHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEE
T ss_pred cEEEcCCcHHHHHHHHHHhcCCCC--EEEEC--CCCcHhHHHH--HHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEE
Confidence 688888877777666665533342 45553 4777775332 3457888888763 1121112 245555
Q ss_pred EEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 598 IIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 598 LLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++- +--...|.++..---..++-+|+.|+++|++
T Consensus 163 ~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 196 (376)
T 2dou_A 163 LLN-YPNNPTGAVADWGYFEEALGLARKHGLWLIH 196 (376)
T ss_dssp EEC-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEC-CCCCCcCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 553 2212234444322223567788999998876
No 146
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=55.50 E-value=73 Score=34.42 Aligned_cols=97 Identities=11% Similarity=0.088 Sum_probs=54.4
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHH-HHHhCCCcEEEEcch---HHHHHhhh-c-cEEEE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLR-RLVKHQVDCSYVLLS---AVSYIMRE-V-SKVII 599 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~-~L~~~GI~vTyI~DS---AVsyiM~~-V-dkVLL 599 (717)
+.|++-+-+..+..+|......|. +|++.+ |.+.|. .+.. .+...|+.++++... .+...+.. . ..|++
T Consensus 131 ~~v~~~sG~~Ai~~al~~l~~~Gd--~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~l 206 (445)
T 1qgn_A 131 STLLMASGMCASTVMLLALVPAGG--HIVTTT--DCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFT 206 (445)
T ss_dssp EEEEESCHHHHHHHHHHHHSCSSC--EEEEET--TSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhCCCC--EEEEcC--CCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEE
Confidence 344444334555555554444443 566654 777763 2333 366789999999743 34444443 3 44444
Q ss_pred ceeeEe-cCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 600 GAHALL-SNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 600 GAdaVl-aNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+.+. ..|.+.. --.|+-+|+++|++|+|
T Consensus 207 --e~p~NptG~v~d---l~~I~~la~~~g~~liv 235 (445)
T 1qgn_A 207 --ESPTNPFLRCVD---IELVSKLCHEKGALVCI 235 (445)
T ss_dssp --ESSCTTTCCCCC---HHHHHHHHHHTTCEEEE
T ss_pred --eCCCCCCCcccC---HHHHHHHHHHcCCEEEE
Confidence 2222 2344432 24788889999998876
No 147
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=55.46 E-value=70 Score=30.10 Aligned_cols=36 Identities=11% Similarity=-0.051 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEce
Q psy17541 566 KEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGA 601 (717)
Q Consensus 566 r~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGA 601 (717)
...++.+.+.|+++..|+++.-+.+.+.+|.+|.-.
T Consensus 109 ~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~ 144 (201)
T 3fxa_A 109 LNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVS 144 (201)
T ss_dssp HTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECC
T ss_pred HHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEcC
Confidence 466788889999999999988888888899998643
No 148
>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomi montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli} SCOP: c.124.1.3 c.124.1.2 PDB: 2ahv_A* 2ahw_A*
Probab=55.34 E-value=1.1e+02 Score=34.20 Aligned_cols=44 Identities=11% Similarity=-0.009 Sum_probs=34.6
Q ss_pred hccEEEEceeeEecCCCeecccc--h---HHHHHHHHhCCCcEEecccC
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRAG--T---AQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKiG--T---~~VALaAK~~~VPVyV~cEt 636 (717)
.+|..|+-|...-.+|.+.-... . ..+|++|+..+--|||-++.
T Consensus 180 ~~DVAlI~a~~aD~~Gn~~~~~~~~~~~~~~~a~aAk~~gg~VIveVn~ 228 (531)
T 2ahu_A 180 APDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNNGGIVMMQVQK 228 (531)
T ss_dssp CCSEEEEECSEEETTCCEECTTSSCCTTHHHHHHHHHTTTCEEEEEESE
T ss_pred CCeEEEEEcccCCCCceEEEcCcccccCHHHHHHhHhhcCCEEEEEEcC
Confidence 58999999999999999876532 2 36899999887777776553
No 149
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=54.90 E-value=60 Score=32.46 Aligned_cols=97 Identities=11% Similarity=0.081 Sum_probs=58.7
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccEE
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMR--EVSKV 597 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~--~VdkV 597 (717)
+++|.|-+..+..++..+...|. +|++.+ |.+-|..+...+...|+.+..+.. .++-..+. ++..|
T Consensus 77 v~~~~gg~~al~~~~~~~~~~gd--~vl~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v 152 (393)
T 3kgw_A 77 LVVSGSGHCAMETALFNLLEPGD--SFLTGT--NGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLL 152 (393)
T ss_dssp EEESCCTTTHHHHHHHHHCCTTC--EEEEEE--SSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEE
T ss_pred EEEeCCcHHHHHHHHHhcCCCCC--EEEEEe--CCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEE
Confidence 67788888887777776644443 556553 444444456666778998888762 23334443 45555
Q ss_pred EEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 598 IIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 598 LLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++- ..--..|.++. --.|+-+|+.|++.|++
T Consensus 153 ~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 183 (393)
T 3kgw_A 153 FLV-HGESSTGVVQP---LDGFGELCHRYQCLLLV 183 (393)
T ss_dssp EEE-SEETTTTEECC---CTTHHHHHHHTTCEEEE
T ss_pred EEe-ccCCcchhhcc---HHHHHHHHHHcCCEEEE
Confidence 443 22223454444 23577889999998887
No 150
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=54.83 E-value=53 Score=33.69 Aligned_cols=101 Identities=14% Similarity=0.225 Sum_probs=53.9
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh-h
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL----------SAVSYIMR-E 593 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D----------SAVsyiM~-~ 593 (717)
...+++|.|.+..+..++..+...|. +|++.+ |.+.|... .+...|+.+..+.. .++-..+. +
T Consensus 104 ~~~v~~~~g~~~al~~~~~~l~~~gd--~vl~~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 177 (416)
T 1bw0_A 104 KDNVVLCSGGSHGILMAITAICDAGD--YALVPQ--PGFPHYET--VCKAYGIGMHFYNCRPENDWEADLDEIRRLKDDK 177 (416)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTC--EEEEEE--SCCTHHHH--HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTT
T ss_pred cceEEEeCChHHHHHHHHHHhCCCCC--EEEEcC--CCcHhHHH--HHHHcCcEEEEeecCcccCCCCCHHHHHHHhccC
Confidence 44688888877776666665543343 555543 55666432 34557888777652 12222332 2
Q ss_pred ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 594 VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 594 VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
...|++- +---..|.++..-=-..|+-+|+.|++.|++
T Consensus 178 ~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 215 (416)
T 1bw0_A 178 TKLLIVT-NPSNPCGSNFSRKHVEDIVRLAEELRLPLFS 215 (416)
T ss_dssp EEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred CeEEEEe-CCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 2233222 2111234444322234567778899998886
No 151
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=54.81 E-value=41 Score=33.54 Aligned_cols=97 Identities=18% Similarity=0.264 Sum_probs=53.7
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhhhccE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMREVSK 596 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~~Vdk 596 (717)
...+++|-|.+..+..++..+ -+|++. .|.+.|.. ..+...|+.+.++.. .++-..+.+ .+
T Consensus 78 ~~~i~~~~g~t~al~~~~~~~------d~vi~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~~ 146 (361)
T 3ftb_A 78 DIGIVLGNGASEIIELSISLF------EKILII--VPSYAEYE--INAKKHGVSVVFSYLDENMCIDYEDIISKIDD-VD 146 (361)
T ss_dssp SCEEEEESSHHHHHHHHHTTC------SEEEEE--ESCCTHHH--HHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-CS
T ss_pred cceEEEcCCHHHHHHHHHHHc------CcEEEe--cCChHHHH--HHHHHcCCeEEEeecCcccCCCHHHHHHhccC-CC
Confidence 345677767666655554433 255554 36666643 334456998888763 244455555 33
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+++=.+.--..|.++..---..++-+|+.||+.+++
T Consensus 147 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 182 (361)
T 3ftb_A 147 SVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIII 182 (361)
T ss_dssp EEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEE
Confidence 332111122234444433344577778899998887
No 152
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=53.96 E-value=54 Score=32.72 Aligned_cols=97 Identities=16% Similarity=0.163 Sum_probs=56.0
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------HHHHHhhh--ccE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS--------AVSYIMRE--VSK 596 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS--------AVsyiM~~--Vdk 596 (717)
.+++|.|.+..+. +|..+...|. +|++.+ |.+-|..+...+...|+.+.++... .+-..+.+ +..
T Consensus 56 ~v~~~~g~t~al~-~~~~~~~~gd--~vi~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~ 130 (384)
T 3zrp_A 56 PLIIPGGGTSAME-SVTSLLKPND--KILVVS--NGVFGDRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKL 130 (384)
T ss_dssp EEEEESCHHHHHH-HGGGGCCTTC--EEEEEC--SSHHHHHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEE
T ss_pred EEEEcCCcHHHHH-HHHhhcCCCC--EEEEec--CCcchHHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcE
Confidence 4777777777777 6665543333 556543 3444443444456679988888632 33333433 334
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++- +.-...|.++. --.|+-+|+.||++|++
T Consensus 131 v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 162 (384)
T 3zrp_A 131 VALT-HVETSTGVREP---VKDVINKIRKYVELIVV 162 (384)
T ss_dssp EEEE-SEETTTTEECC---HHHHHHHHGGGEEEEEE
T ss_pred EEEe-CCCCCCceECc---HHHHHHHHHhcCCEEEE
Confidence 4333 32233454444 34677889999988876
No 153
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=53.94 E-value=58 Score=35.67 Aligned_cols=112 Identities=15% Similarity=0.194 Sum_probs=71.4
Q ss_pred ccCCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCc-hh-HHHHHHHHHhCCCcEEEEc-c----hHHHHHhhhc
Q psy17541 523 LANDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPW-YE-GKEMLRRLVKHQVDCSYVL-L----SAVSYIMREV 594 (717)
Q Consensus 523 I~dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~-~E-Gr~lA~~L~~~GI~vTyI~-D----SAVsyiM~~V 594 (717)
+..+.+||+.|-++-+-..|. ...+.|.. +|+++.-++. .+ ...++.+|...|..++++. | .++..++..+
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAP-HLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCS-EEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCC-EEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 456778888887776655443 34445543 4555543332 22 2567788988998888764 3 4566777665
Q ss_pred ------cEEEEceeeEecCCCee-------------cccchHHHHHHHHhCCCcEEecccC
Q psy17541 595 ------SKVIIGAHALLSNGAVM-------------SRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 595 ------dkVLLGAdaVlaNG~Vv-------------NKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
|.||-.|- +..+|.+. |-.|+..+.-++...+..++|++.+
T Consensus 302 ~~~g~ld~VIh~AG-~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS 361 (486)
T 2fr1_A 302 GDDVPLSAVFHAAA-TLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSS 361 (486)
T ss_dssp CTTSCEEEEEECCC-CCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEE
T ss_pred HhcCCCcEEEECCc-cCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcC
Confidence 77776653 33444322 5678888888888888888887655
No 154
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=53.79 E-value=78 Score=31.61 Aligned_cols=99 Identities=9% Similarity=0.040 Sum_probs=57.0
Q ss_pred CCeEEEecCchHHHHHHHHHH---HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc---------hHHHHHhh-
Q psy17541 526 DDVILTYGCSSLVEKILLTAH---EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL---------SAVSYIMR- 592 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~---e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D---------SAVsyiM~- 592 (717)
..+++|-|.+..+..++..+. ..|. +|+|+++ |.+.+. +...+...|+.+..+.. ..+-..+.
T Consensus 60 ~~v~~~~g~t~al~~~~~~~~~~~~~gd--~vlv~~~-~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~ 135 (385)
T 2bkw_A 60 QPFVLAGSGTLGWDIFASNFILSKAPNK--NVLVVST-GTFSDR-FADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQ 135 (385)
T ss_dssp EEEEEESCTTHHHHHHHHHHSCTTCSCC--EEEEECS-SHHHHH-HHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHH
T ss_pred ceEEEcCchHHHHHHHHHHHhccCCCCC--eEEEEcC-CcchHH-HHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhc
Confidence 357788887777666666553 3343 6666654 333332 23455668998888763 23333343
Q ss_pred -hccEEEEceeeEecCCCeecccchHHHHHHHHhC--CCcEEe
Q psy17541 593 -EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAF--NVPVLA 632 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~--~VPVyV 632 (717)
++..|++- +.-...|.++. -..|+-+|+.| |++|++
T Consensus 136 ~~~~~v~~~-~~~nptG~~~~---l~~i~~~~~~~~~~~~li~ 174 (385)
T 2bkw_A 136 NSYGAVTVT-HVDTSTAVLSD---LKAISQAIKQTSPETFFVV 174 (385)
T ss_dssp SCCSEEEEE-SEETTTTEECC---HHHHHHHHHHHCTTSEEEE
T ss_pred CCCCEEEEE-ccCCCcCeEcC---HHHHHHHHHhhCCCCEEEE
Confidence 34555542 22223355544 24677788888 887776
No 155
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=53.40 E-value=13 Score=40.03 Aligned_cols=77 Identities=14% Similarity=0.164 Sum_probs=52.0
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEce
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGA 601 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGA 601 (717)
.|..|.+||..|.+..-..++..|.+.| ++|+|+|..|...+..++ ..-+...|....++..+..++|.|+.|-
T Consensus 31 ~~~~~~~IlIlG~G~lg~~~~~aa~~lG--~~v~v~d~~~~~p~~~~a----d~~~~~~~~d~~~l~~~a~~~D~V~~~~ 104 (419)
T 4e4t_A 31 PILPGAWLGMVGGGQLGRMFCFAAQSMG--YRVAVLDPDPASPAGAVA----DRHLRAAYDDEAALAELAGLCEAVSTEF 104 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCTTCHHHHHS----SEEECCCTTCHHHHHHHHHHCSEEEECC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCcCchhhhC----CEEEECCcCCHHHHHHHHhcCCEEEEcc
Confidence 4778999999999988788888887766 568888887776554332 2111111111235555667899999887
Q ss_pred eeE
Q psy17541 602 HAL 604 (717)
Q Consensus 602 daV 604 (717)
+.+
T Consensus 105 e~~ 107 (419)
T 4e4t_A 105 ENV 107 (419)
T ss_dssp TTC
T ss_pred CcC
Confidence 665
No 156
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=53.22 E-value=30 Score=30.83 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=25.0
Q ss_pred hccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEecc
Q psy17541 593 EVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~c 634 (717)
++|.|++|++.- |++-. -.|+..-.++ ++..+||+|+=
T Consensus 120 ~~dlIV~G~~g~---~~~~~~~~GSv~~~vl-~~~~~pVlvv~ 158 (162)
T 1mjh_A 120 GVDIIIMGSHGK---TNLKEILLGSVTENVI-KKSNKPVLVVK 158 (162)
T ss_dssp TCSEEEEESCCS---SCCTTCSSCHHHHHHH-HHCCSCEEEEC
T ss_pred CCCEEEEcCCCC---CCccceEecchHHHHH-HhCCCCEEEEe
Confidence 689999999864 22222 2576554444 44689999974
No 157
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=53.20 E-value=1.5e+02 Score=30.30 Aligned_cols=52 Identities=17% Similarity=0.034 Sum_probs=36.5
Q ss_pred HHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEc---eeeEecCCCeecccchHHH
Q psy17541 566 KEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIG---AHALLSNGAVMSRAGTAQV 619 (717)
Q Consensus 566 r~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLG---AdaVlaNG~VvNKiGT~~V 619 (717)
...++.+.+.|+++..|+++.-+.+.+.+|.+|.- .+.+ .|....+.||.+.
T Consensus 157 i~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~~~g~E~~--~~st~~~s~ta~~ 211 (306)
T 1nri_A 157 IAGLQYAKSLGALTISIASNPKSEMAEIADIAIETIVGPEIL--TGSSRLKSGTAQK 211 (306)
T ss_dssp HHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEECCCCSCSS--TTCTTTHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEcCCCCccc--cCcccchhHHHHH
Confidence 56788888899999999998877887889988853 3322 2333345666543
No 158
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=53.14 E-value=97 Score=31.34 Aligned_cols=99 Identities=16% Similarity=0.208 Sum_probs=54.0
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch---------HHHHHh-hhccE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS---------AVSYIM-REVSK 596 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS---------AVsyiM-~~Vdk 596 (717)
.+++|.|.+..+..++..+...|. +|++.+ |.+.|.. ..+...|+.+..+... .+-..+ +++..
T Consensus 93 ~v~~~~g~~~a~~~~~~~~~~~gd--~vl~~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~ 166 (386)
T 1u08_A 93 DITVTAGATEALYAAITALVRNGD--EVICFD--PSYDSYA--PAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRL 166 (386)
T ss_dssp TEEEESSHHHHHHHHHHHHCCTTC--EEEEEE--SCCTTHH--HHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEE
T ss_pred CEEEcCChHHHHHHHHHHhCCCCC--EEEEeC--CCchhHH--HHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEE
Confidence 688888877777666665543343 555543 5555543 2345578888877631 122222 23444
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++- ..-...|.++..-=-..|+-+|+.|++.|++
T Consensus 167 v~l~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 201 (386)
T 1u08_A 167 VILN-TPHNPSATVWQQADFAALWQAIAGHEIFVIS 201 (386)
T ss_dssp EEEE-SSCTTTCCCCCHHHHHHHHHHHTTSCCEEEE
T ss_pred EEEe-CCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 4442 2112234443322224567788899998776
No 159
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=52.73 E-value=31 Score=38.60 Aligned_cols=95 Identities=19% Similarity=0.240 Sum_probs=56.4
Q ss_pred HHHhhccCCCeEEEecCc------hHHHHHHHHHHH---cCC--eeEEEEc-CCCC-----------------chhHHHH
Q psy17541 518 FFHNKLANDDVILTYGCS------SLVEKILLTAHE---KGT--KFRVIIV-DGSP-----------------WYEGKEM 568 (717)
Q Consensus 518 ~A~e~I~dGdvILTyg~S------StV~~vL~~A~e---~Gk--~FrVIVv-ESRP-----------------~~EGr~l 568 (717)
.|..+|+||++|.+.|+. .++..+..++.+ .|. .++++.. -..| ++.|-.
T Consensus 10 EAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~~~~~g~~~~Ltl~~~~s~g~~~~~~l~~~g~v~~~~~~~~~~~- 88 (506)
T 2nvv_A 10 EAAEFVHHNDNVGFSGFTPAGNPKVVPAAIAKRAIAAHEKGNPFKIGMFTGASTGARLDGVLAQADAVKFRTPYQSNKD- 88 (506)
T ss_dssp HHHTTCCTTCEEEECCSSSTTCCCSHHHHHHHHHHHHHTTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEESCCCCHH-
T ss_pred HHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhHHhhccccCCceEEEEEecCCCcchhHHhccCCceEEEeeeCCCHH-
Confidence 455789999999999875 345555555543 332 4555542 1222 222222
Q ss_pred HHHHHhCC-CcEEEEcchHHHHHhh-----hccEEEEceeeEecCCCeecc
Q psy17541 569 LRRLVKHQ-VDCSYVLLSAVSYIMR-----EVSKVIIGAHALLSNGAVMSR 613 (717)
Q Consensus 569 A~~L~~~G-I~vTyI~DSAVsyiM~-----~VdkVLLGAdaVlaNG~VvNK 613 (717)
.+++...| ++..-+..+.+..++. .+|..|+-|...-.+|.+.-.
T Consensus 89 ~r~~i~~G~i~~~P~~ls~v~~~l~~~~l~~~DVAlI~as~aDe~Gnls~~ 139 (506)
T 2nvv_A 89 LRNLINNGSTSYFDLHLSTLAQDLRYGFYGKVDVAIIEVADVTEDGKILPT 139 (506)
T ss_dssp HHHHHHTTSSEECCCCGGGHHHHHHTTSSCCCCEEEEEESEECTTSEEECC
T ss_pred HHHHHHcCCCeEeCCCcccHHHHHHcCCcCCCCEEEEEecccCCCceEEEe
Confidence 34444445 4333333455554443 589999999999999987653
No 160
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=52.54 E-value=77 Score=27.26 Aligned_cols=57 Identities=12% Similarity=0.093 Sum_probs=34.1
Q ss_pred HHhCCCcE--EEEcc-hH---HHHHhh--hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 572 LVKHQVDC--SYVLL-SA---VSYIMR--EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 572 L~~~GI~v--TyI~D-SA---VsyiM~--~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
+.+.|+++ +.+.. .. +..+.. ++|.|++|++ - |+ +.+.|+. ..-+.++.++||+|+-
T Consensus 73 ~~~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~-~---~~-~~~lgs~-~~~vl~~~~~pVlvv~ 137 (141)
T 1jmv_A 73 AESVDYPISEKLSGSGDLGQVLSDAIEQYDVDLLVTGHH-Q---DF-WSKLMSS-TRQVMNTIKIDMLVVP 137 (141)
T ss_dssp HHHSSSCCCCEEEEEECHHHHHHHHHHHTTCCEEEEEEC-C---CC-HHHHHHH-HHHHHTTCCSEEEEEE
T ss_pred HHHcCCCceEEEEecCCHHHHHHHHHHhcCCCEEEEeCC-C---ch-hhhhcch-HHHHHhcCCCCEEEee
Confidence 34578875 23332 22 223333 4999999988 2 22 3446744 4445566789999974
No 161
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=52.39 E-value=1.3e+02 Score=29.89 Aligned_cols=57 Identities=19% Similarity=0.293 Sum_probs=35.3
Q ss_pred CCCcEEEEcc-----hHHHHHhhhccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEeccc
Q psy17541 575 HQVDCSYVLL-----SAVSYIMREVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 575 ~GI~vTyI~D-----SAVsyiM~~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~cE 635 (717)
.|+++++... .++-.+..++|.+++|+..- |++-. -.|+..-.++ ++..+||+|+=+
T Consensus 244 ~~~~~~~~~~~g~~~~~I~~~a~~adliV~G~~~~---~~~~~~l~Gsv~~~vl-~~~~~pVlvv~~ 306 (309)
T 3cis_A 244 PNVAITRVVVRDQPARQLVQRSEEAQLVVVGSRGR---GGYAGMLVGSVGETVA-QLARTPVIVARE 306 (309)
T ss_dssp TTSCEEEEEESSCHHHHHHHHHTTCSEEEEESSCS---SCCTTCSSCHHHHHHH-HHCSSCEEEECC
T ss_pred CCCcEEEEEEcCCHHHHHHHhhCCCCEEEECCCCC---CCccccccCcHHHHHH-hcCCCCEEEeCC
Confidence 4888776432 13333445899999999753 22322 2466555555 556899999754
No 162
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=52.31 E-value=91 Score=31.86 Aligned_cols=105 Identities=12% Similarity=0.022 Sum_probs=55.2
Q ss_pred cCCCeEE--EecCchHHHHHHH--HHHHcCC---eeEEEEcCCCCchhHHHHHHHHHhCCCc-EEEEcc----------h
Q psy17541 524 ANDDVIL--TYGCSSLVEKILL--TAHEKGT---KFRVIIVDGSPWYEGKEMLRRLVKHQVD-CSYVLL----------S 585 (717)
Q Consensus 524 ~dGdvIL--Tyg~SStV~~vL~--~A~e~Gk---~FrVIVvESRP~~EGr~lA~~L~~~GI~-vTyI~D----------S 585 (717)
....+++ |.|-+..+..++. .....|+ .=+|++.+ |.+.|.. ..+...|++ +..+.. .
T Consensus 96 ~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~--p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~~d~~ 171 (412)
T 1ajs_A 96 QEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSS--PTWENHN--GVFTTAGFKDIRSYRYWDTEKRGLDLQ 171 (412)
T ss_dssp HTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEE--SCCTHHH--HHHHHTTCSCEEEEECEETTTTEECHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcC--CCcHHHH--HHHHHcCCceeEEEeeecCCCCccCHH
Confidence 3457888 8888877766643 2233341 02455543 6666643 234446888 776653 1
Q ss_pred HHHHHhhh---ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 586 AVSYIMRE---VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 586 AVsyiM~~---VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++-..+.+ -+++++=...-...|.+++.-=-..|+-+|+.|++.|++
T Consensus 172 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 221 (412)
T 1ajs_A 172 GFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFF 221 (412)
T ss_dssp HHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 23333332 123332233333344444332223577788899988776
No 163
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=52.26 E-value=39 Score=33.70 Aligned_cols=98 Identities=12% Similarity=0.102 Sum_probs=52.8
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------HHHHHhh---h
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS--------AVSYIMR---E 593 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS--------AVsyiM~---~ 593 (717)
...+++|.|.+..+..++......|. +|++.+ |.+.+.. ..+...|+++.++... .+-..+. +
T Consensus 68 ~~~i~~~~g~~~a~~~~~~~l~~~gd--~vl~~~--~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 141 (354)
T 3ly1_A 68 APSILLTAGSSEGIRAAIEAYASLEA--QLVIPE--LTYGDGE--HFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSG 141 (354)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTC--EEEEES--SSCTHHH--HHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSS
T ss_pred hHHEEEeCChHHHHHHHHHHHhCCCC--eEEECC--CCchHHH--HHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCC
Confidence 34677777777776666555433343 455543 6666542 3444678888888643 3444443 4
Q ss_pred ccEEEEceeeEecCCCeecccchHHHHHHHHh--CCCcEEe
Q psy17541 594 VSKVIIGAHALLSNGAVMSRAGTAQVSLVARA--FNVPVLA 632 (717)
Q Consensus 594 VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~--~~VPVyV 632 (717)
+..|+| .+.-...|.++..- .+.-+++. +++.|++
T Consensus 142 ~~~v~l-~~p~nptG~~~~~~---~l~~l~~~~~~~~~li~ 178 (354)
T 3ly1_A 142 PSIVYL-VNPNNPTGTITPAD---VIEPWIASKPANTMFIV 178 (354)
T ss_dssp CEEEEE-ESSCTTTCCCCCHH---HHHHHHHTCCTTEEEEE
T ss_pred CCEEEE-eCCCCCcCCCcCHH---HHHHHHHhCCCCeEEEE
Confidence 556655 23322334444333 23444444 7776665
No 164
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=52.18 E-value=31 Score=31.01 Aligned_cols=39 Identities=23% Similarity=0.257 Sum_probs=25.1
Q ss_pred hccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEeccc
Q psy17541 593 EVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~cE 635 (717)
++|.|++|++.- |++-. -.|+..--+ .++..+||+|+-.
T Consensus 117 ~~DlIV~G~~g~---~~~~~~~~Gsv~~~v-l~~~~~PVlvv~~ 156 (170)
T 2dum_A 117 NVSLIILPSRGK---LSLSHEFLGSTVMRV-LRKTKKPVLIIKE 156 (170)
T ss_dssp TCSEEEEESCCC---CC--TTCCCHHHHHH-HHHCSSCEEEECC
T ss_pred CCCEEEECCCCC---CccccceechHHHHH-HHhCCCCEEEEcc
Confidence 699999999863 23322 256654444 4556799999753
No 165
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=52.04 E-value=82 Score=32.48 Aligned_cols=102 Identities=20% Similarity=0.300 Sum_probs=57.3
Q ss_pred cCC-CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch-----------------
Q psy17541 524 AND-DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS----------------- 585 (717)
Q Consensus 524 ~dG-dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS----------------- 585 (717)
... .+++|.|.+..+..++..+...|. +|++.+ |.+.|... .+...|+.+.++...
T Consensus 99 ~~~~~v~~~~g~~~a~~~~~~~~~~~gd--~Vl~~~--p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~ 172 (429)
T 1yiz_A 99 NPMTEVLVTVGAYEALYATIQGHVDEGD--EVIIIE--PFFDCYEP--MVKAAGGIPRFIPLKPNKTGGTISSADWVLDN 172 (429)
T ss_dssp CTTTSEEEESHHHHHHHHHHHHHCCTTC--EEEEEE--SCCTTHHH--HHHHTTCEEEEEECBCCCSSSSEEGGGCBCCH
T ss_pred CCcCCEEEecChHHHHHHHHHHhcCCCC--EEEEcC--CCchhHHH--HHHHcCCEEEEEeCCcccccccccccCcccCH
Confidence 344 688888888877777666544343 566544 66766433 234578888777521
Q ss_pred -HHHHHh-hhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 586 -AVSYIM-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 586 -AVsyiM-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.+-..+ +++..|++- ..--..|.++..-=-..|+-+|+.|++.|++
T Consensus 173 ~~l~~~l~~~~~~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (429)
T 1yiz_A 173 NELEALFNEKTKMIIIN-TPHNPLGKVMDRAELEVVANLCKKWNVLCVS 220 (429)
T ss_dssp HHHHHHCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHhccCceEEEEC-CCCCCCCccCCHHHHHHHHHHHHHcCcEEEE
Confidence 122222 234445442 2222235444332234567788899998776
No 166
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=51.94 E-value=37 Score=37.86 Aligned_cols=95 Identities=13% Similarity=0.167 Sum_probs=54.3
Q ss_pred HHHhhccCCCeEEEecCc------hHHHHHHHHHHHcCCeeEEEEc-CCCCchhHH----------------HHHHHHHh
Q psy17541 518 FFHNKLANDDVILTYGCS------SLVEKILLTAHEKGTKFRVIIV-DGSPWYEGK----------------EMLRRLVK 574 (717)
Q Consensus 518 ~A~e~I~dGdvILTyg~S------StV~~vL~~A~e~Gk~FrVIVv-ESRP~~EGr----------------~lA~~L~~ 574 (717)
.|..+|+||++|.+.|+. .++..+..++.+.+.+++++.. ...|..+|+ ...+++..
T Consensus 20 EAv~~IkdGdtV~~gGf~~~G~P~~Li~AL~~r~~~~dl~Ltl~~~~~~g~~~~~~l~~~g~v~~~~~~~~~~~~r~~i~ 99 (497)
T 2g39_A 20 EAADLIQDGMTVGMSGFTRAGEAKAVPQALAMRAKERPLRISLMTGASLGNDLDKQLTEAGVLARRMPFQVDSTLRKAIN 99 (497)
T ss_dssp HHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHHSCCCEEEECSSCCCTTHHHHHHHTTCEEEEESCCCCHHHHHHHH
T ss_pred HHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHhhhcCCceEEEEecccccccchHHHhcCCceEEEEeeCCCHHHHHHHH
Confidence 345689999999999875 2344444444322233555531 223332221 12344445
Q ss_pred CCCcEEEEc--chHHHHHhh-----hccEEEEceeeEecCCCeecc
Q psy17541 575 HQVDCSYVL--LSAVSYIMR-----EVSKVIIGAHALLSNGAVMSR 613 (717)
Q Consensus 575 ~GI~vTyI~--DSAVsyiM~-----~VdkVLLGAdaVlaNG~VvNK 613 (717)
.|- +.|++ .+.+..++. .+|..|+.|...-.+|.+.-.
T Consensus 100 ~G~-v~fvP~~ls~~~~~l~~~~l~~~DVAlI~as~aDe~Gnls~~ 144 (497)
T 2g39_A 100 AGE-VMFIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPT 144 (497)
T ss_dssp TTS-SEECCCCTTTHHHHHHTTSSCCCSEEEEEESEECTTSCEECC
T ss_pred cCC-CeEECCccccHHHHHHcCCcCCCCEEEEEecccCCCceEEEe
Confidence 553 44443 344443332 489999999999999987654
No 167
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=51.91 E-value=97 Score=28.06 Aligned_cols=62 Identities=15% Similarity=0.182 Sum_probs=36.6
Q ss_pred HHHHHhCCCc-EEEEc--chHHHHHh-----hhccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEecc
Q psy17541 569 LRRLVKHQVD-CSYVL--LSAVSYIM-----REVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 569 A~~L~~~GI~-vTyI~--DSAVsyiM-----~~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~c 634 (717)
...|...|++ +.... ......++ .++|.|++|++.- |++-. -.|+..--++ ++..+||+|+-
T Consensus 87 ~~~~~~~gv~~v~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~---~~~~~~~lGSva~~vl-~~a~~PVlvV~ 157 (163)
T 1tq8_A 87 KERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGL---STIAGRLLGSVPANVS-RRAKVDVLIVH 157 (163)
T ss_dssp HHHHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCCC---CSHHHHHTBBHHHHHH-HHTTCEEEEEC
T ss_pred HHHHHHcCCCeEEEEEecCCHHHHHHHHHHhcCCCEEEECCCCC---CcccceeeccHHHHHH-HhCCCCEEEEe
Confidence 3445567998 66543 22222233 2699999999853 22222 2566554444 45579999974
No 168
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=51.75 E-value=1.8e+02 Score=29.58 Aligned_cols=100 Identities=11% Similarity=0.080 Sum_probs=52.2
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCC--cEEEEcc-----------------hHH
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQV--DCSYVLL-----------------SAV 587 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI--~vTyI~D-----------------SAV 587 (717)
.+++|-|-+..+..+| .+...|. +|++.+ +.+-|..+...+...|+ .+.++.. ..+
T Consensus 53 ~v~~~~sgt~a~~~~~-~~~~~gd--~vi~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l 127 (379)
T 3ke3_A 53 AVIIPGSGTYGMEAVA-RQLTIDE--DCLIIR--NGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETA 127 (379)
T ss_dssp EEEEESCHHHHHHHHH-HHHCTTC--EEEEEE--CSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHH
T ss_pred EEEEcCChhHHHHHHH-HhCCCCC--eEEEEe--CCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHH
Confidence 3445555555655555 3443343 677765 44556555555555665 4554431 234
Q ss_pred HHHhh--hccEEEEceeeEecCCCeecccc-hHHHHHHHHhCCCcEEec
Q psy17541 588 SYIMR--EVSKVIIGAHALLSNGAVMSRAG-TAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 588 syiM~--~VdkVLLGAdaVlaNG~VvNKiG-T~~VALaAK~~~VPVyV~ 633 (717)
-..+. +...|++ .+.=...| ++...+ --.|+-+|+.||+.++|=
T Consensus 128 ~~~i~~~~~~~v~~-~~~~~~~G-~~~~~~~l~~i~~~~~~~~~~li~D 174 (379)
T 3ke3_A 128 VAKIKEDKSAIVYA-PHVETSSG-IILSEEYIKALSEAVHSVGGLLVID 174 (379)
T ss_dssp HHHHHHHTCSEEEE-ESEETTTT-EECCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhhcCCcEEEE-EeecCCCc-eeCCHHHHHHHHHHHHHcCCEEEEE
Confidence 44442 4555544 11111234 444422 335778889999988863
No 169
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=51.66 E-value=4 Score=42.84 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=45.7
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEce
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGA 601 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGA 601 (717)
.+..|.+|+..|.+..-..+...|++.| ++|+++|..|...+..+ ...-+...|....++-.+..++|.|..|-
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa~~~G--~~vi~~d~~~~~~~~~~----ad~~~~~~~~d~~~l~~~~~~~dvI~~~~ 83 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAAKEMG--YKIAVLDPTKNSPCAQV----ADIEIVASYDDLKAIQHLAEISDVVTYEF 83 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSTTCTTTTT----CSEEEECCTTCHHHHHHHHHTCSEEEESC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCCCCchHHh----CCceEecCcCCHHHHHHHHHhCCEeeecc
Confidence 3557889999999988788888887666 57888887765433211 11111111111224555566777776664
Q ss_pred ee
Q psy17541 602 HA 603 (717)
Q Consensus 602 da 603 (717)
+.
T Consensus 84 e~ 85 (389)
T 3q2o_A 84 EN 85 (389)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 170
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=51.33 E-value=19 Score=41.52 Aligned_cols=69 Identities=13% Similarity=0.191 Sum_probs=44.5
Q ss_pred CeEEEecCch--HHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHH-h--CCCcEEEEcchHHHHHhh-hccEEE
Q psy17541 527 DVILTYGCSS--LVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLV-K--HQVDCSYVLLSAVSYIMR-EVSKVI 598 (717)
Q Consensus 527 dvILTyg~SS--tV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~-~--~GI~vTyI~DSAVsyiM~-~VdkVL 598 (717)
.+||..|.++ +|...|+.+.+.++.++||.+|-.|.-. .++++. + .|=.||+|.-.+=-.-++ +||.+|
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~---~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIV 433 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV---VTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIV 433 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH---HHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH---HHHHHHHhccCCCeEEEEeCcceeccCCcccCEEE
Confidence 4788887665 6778888888788999999999988533 333333 2 344577776433222232 466664
No 171
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=51.32 E-value=96 Score=33.28 Aligned_cols=103 Identities=12% Similarity=0.074 Sum_probs=56.2
Q ss_pred CCCeEEEecCchHHHHHHHHHHH--------cC----CeeEEEEcCCCCchhHHHHHHHHHhCCC-cEEEEcch------
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHE--------KG----TKFRVIIVDGSPWYEGKEMLRRLVKHQV-DCSYVLLS------ 585 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e--------~G----k~FrVIVvESRP~~EGr~lA~~L~~~GI-~vTyI~DS------ 585 (717)
.+++++|-|-|..+..+|..+.. .| .+..|++.+ +.+-...-+..+...|. .+.+|+..
T Consensus 151 ~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~--~~h~s~~~~~~~~g~g~~~v~~v~~~~~~~~d 228 (504)
T 2okj_A 151 DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSE--QSHYSIKKAGAALGFGTDNVILIKCNERGKII 228 (504)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEET--TSCTHHHHHHHHTTSCGGGEEEECBCTTSCBC
T ss_pred CCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECC--cchHHHHHHHHHcCCCcccEEEEecCCCCCCC
Confidence 45688888888777777766642 35 245677654 33333322233323344 78877642
Q ss_pred --HHHHHhhh------ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 586 --AVSYIMRE------VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 586 --AVsyiM~~------VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++-..+.+ ..++|+....-...|.+. . -..|+-+|+.||++|+|
T Consensus 229 ~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~-~--l~~I~~la~~~g~~lhv 280 (504)
T 2okj_A 229 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAFD-P--IQEIADICEKYNLWLHV 280 (504)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBC-C--HHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcC-C--HHHHHHHHHHcCCEEEE
Confidence 33334433 234444332222234332 2 24678889999999887
No 172
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=50.79 E-value=61 Score=33.05 Aligned_cols=102 Identities=11% Similarity=0.196 Sum_probs=49.6
Q ss_pred CCeEEEecCchHHHHHHHHHHH------cCCeeEEEEcCCCCchhHHHHHHHHHhCCCc------------EEEEcch--
Q psy17541 526 DDVILTYGCSSLVEKILLTAHE------KGTKFRVIIVDGSPWYEGKEMLRRLVKHQVD------------CSYVLLS-- 585 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e------~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~------------vTyI~DS-- 585 (717)
..+++|-|-+..+..+|..+.. .|+ -+|++.+ |.+.|... ..+...|.+ +..++..
T Consensus 98 ~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~-~~vi~~~--~~yh~~~~-~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~ 173 (397)
T 2ord_A 98 GKVFFANTGTEANEAAIKIARKYGKKKSEKK-YRILSAH--NSFHGRTL-GSLTATGQPKYQKPFEPLVPGFEYFEFNNV 173 (397)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHCTTC-CEEEEEB--TCCCCSSH-HHHHHSBCHHHHGGGCSCCTTEEEECTTCH
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHhhcCCCCC-ceEEEEc--CCcCCCch-hhhhccCChhhccccCCCCCCeeEecCCCH
Confidence 4577777777777766665532 233 2566665 34434211 012223433 5555422
Q ss_pred -HHHHHhh-hccEEEEceeeEecCCC-eecccchHHHHHHHHhCCCcEEe
Q psy17541 586 -AVSYIMR-EVSKVIIGAHALLSNGA-VMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 586 -AVsyiM~-~VdkVLLGAdaVlaNG~-VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.+-..+. ++..|++-. --...|. ++..-=-..++-+|++|+++|++
T Consensus 174 ~~l~~~l~~~~~~v~~~~-~~nptG~~~~~~~~l~~l~~l~~~~~~~li~ 222 (397)
T 2ord_A 174 EDLRRKMSEDVCAVFLEP-IQGESGIVPATKEFLEEARKLCDEYDALLVF 222 (397)
T ss_dssp HHHHHHCCTTEEEEEECS-EECTTTCEECCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHhhcCeEEEEEec-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 3333333 333333321 1111233 23222225677788999998876
No 173
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=50.76 E-value=20 Score=35.05 Aligned_cols=103 Identities=7% Similarity=-0.045 Sum_probs=58.0
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEceeeE
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--L-SAVSYIMREVSKVIIGAHAL 604 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--D-SAVsyiM~~VdkVLLGAdaV 604 (717)
+||+.|-+..|-..|..........+|+++.-+|.. +..|...|+.+...- | .++..++..+|.||.-|-..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~-----~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~ 76 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEK-----VPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSII 76 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGG-----SCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHH-----HHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCC
Confidence 477888776665544443332112345544333321 122344565544332 2 45666777888877655321
Q ss_pred ecCCCeecccchHHHHHHHHhCCCcEEecccCC
Q psy17541 605 LSNGAVMSRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 605 laNG~VvNKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
+..-.|-.|+..+.-+|+..+++-+|...+|
T Consensus 77 --~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~ 107 (289)
T 3e48_A 77 --HPSFKRIPEVENLVYAAKQSGVAHIIFIGYY 107 (289)
T ss_dssp --CSHHHHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred --ccchhhHHHHHHHHHHHHHcCCCEEEEEccc
Confidence 1112355788888889999998877776664
No 174
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=50.68 E-value=46 Score=29.69 Aligned_cols=55 Identities=11% Similarity=0.222 Sum_probs=39.2
Q ss_pred EEEecCc-hHHHHHHHHHHHcCCeeEEEEcCCCCc-hhHHHHHHHHHhCCCcEEEEc
Q psy17541 529 ILTYGCS-SLVEKILLTAHEKGTKFRVIIVDGSPW-YEGKEMLRRLVKHQVDCSYVL 583 (717)
Q Consensus 529 ILTyg~S-StV~~vL~~A~e~Gk~FrVIVvESRP~-~EGr~lA~~L~~~GI~vTyI~ 583 (717)
|.++-.+ ..+...|..|+++|.+++|++-...-. ...+..++.|.+.|+++.+..
T Consensus 32 i~~~~~~~~~i~~aL~~a~~rGV~Vril~~~~~~~~~~~~~~~~~L~~~gv~v~~~~ 88 (155)
T 1byr_A 32 MMAYSFTAPDIMKALVAAKKRGVDVKIVIDERGNTGRASIAAMNYIANSGIPLRTDS 88 (155)
T ss_dssp EEESSBCCHHHHHHHHHHHHTTCEEEEEEESTTCCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEEeCCHHHHHHHHHHHHCCCEEEEEEeCccccccccHHHHHHHHHCCCeEEEcC
Confidence 4444443 457788889999999999987654322 234567888999999988763
No 175
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=50.57 E-value=66 Score=27.52 Aligned_cols=81 Identities=15% Similarity=0.210 Sum_probs=50.2
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--HHHHhh--hccEEEEceeeEecCCCeecccchHHHHHHHHhC
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--VSYIMR--EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAF 626 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--VsyiM~--~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~ 626 (717)
..+|+|+|..|.. ...+...|...|+.|....+.. +..+.. ..|.||+..+- .+| .-|.-.+..+-+..
T Consensus 5 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l--~~~----~~g~~~~~~l~~~~ 77 (140)
T 3h5i_A 5 DKKILIVEDSKFQ-AKTIANILNKYGYTVEIALTGEAAVEKVSGGWYPDLILMDIEL--GEG----MDGVQTALAIQQIS 77 (140)
T ss_dssp -CEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCSEEEEESSC--SSS----CCHHHHHHHHHHHC
T ss_pred CcEEEEEeCCHHH-HHHHHHHHHHcCCEEEEecChHHHHHHHhcCCCCCEEEEeccC--CCC----CCHHHHHHHHHhCC
Confidence 4578888877654 2345667778888887666543 333333 47889887542 221 23444454555557
Q ss_pred CCcEEecccCCc
Q psy17541 627 NVPVLAACETHK 638 (717)
Q Consensus 627 ~VPVyV~cEtyK 638 (717)
++||++++....
T Consensus 78 ~~~ii~ls~~~~ 89 (140)
T 3h5i_A 78 ELPVVFLTAHTE 89 (140)
T ss_dssp CCCEEEEESSSS
T ss_pred CCCEEEEECCCC
Confidence 899999887654
No 176
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=50.52 E-value=74 Score=32.21 Aligned_cols=102 Identities=12% Similarity=0.078 Sum_probs=53.5
Q ss_pred CCCeEE--EecCchHHHHHHHHHHH--cCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc----------hHHHHH
Q psy17541 525 NDDVIL--TYGCSSLVEKILLTAHE--KGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL----------SAVSYI 590 (717)
Q Consensus 525 dGdvIL--Tyg~SStV~~vL~~A~e--~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D----------SAVsyi 590 (717)
...+++ |.|-+..+..++..+.. .|. +|++. .|.+.|... .+...|..+..+.. .++-..
T Consensus 89 ~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd--~vl~~--~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 162 (394)
T 2ay1_A 89 SETTATLATVGGTGALRQALELARMANPDL--RVFVS--DPTWPNHVS--IMNFMGLPVQTYRYFDAETRGVDFEGMKAD 162 (394)
T ss_dssp GGGEEEEEEEHHHHHHHHHHHHHHHHCTTC--CEEEE--ESCCHHHHH--HHHHHTCCEEEEECEETTTTEECHHHHHHH
T ss_pred cccEEEEecCCchhHHHHHHHHHHhcCCCC--EEEEc--CCCChhHHH--HHHHcCCceEEEecccccCCccCHHHHHHH
Confidence 335666 77777776666654433 443 45554 377777433 23345777776653 133333
Q ss_pred hhh---ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 591 MRE---VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 591 M~~---VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+.+ .+++++=...--..|.++..-=-..++-+|+.+++.|++
T Consensus 163 l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 207 (394)
T 2ay1_A 163 LAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLI 207 (394)
T ss_dssp HHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 432 244444222222334444332222467778888987775
No 177
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=50.48 E-value=63 Score=33.94 Aligned_cols=98 Identities=11% Similarity=0.077 Sum_probs=54.0
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHH--HHHhCCCcEEEE-cc---hHHHHHhhhccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLR--RLVKHQVDCSYV-LL---SAVSYIMREVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~--~L~~~GI~vTyI-~D---SAVsyiM~~VdkVLLG 600 (717)
+.|++-+-+..+..+|..+...| -+|++. .|.+.|..... .+...|+.+.++ .. ..+-..+..-.++|+
T Consensus 75 ~~v~~~sGt~A~~~~l~~~~~~g--d~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~- 149 (421)
T 2ctz_A 75 AALATASGHAAQFLALTTLAQAG--DNIVST--PNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWW- 149 (421)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEC--SCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEE-
T ss_pred ceEEecCHHHHHHHHHHHHhCCC--CEEEEe--CCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEE-
Confidence 34444443555555555443333 355553 46666643332 246789999998 53 334444433233333
Q ss_pred eeeEec-CCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALLS-NGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVla-NG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.+.+.. .|.+.. -..|+-+|+.+|++|+|
T Consensus 150 ~~~~~n~~G~~~~---l~~i~~~a~~~g~~liv 179 (421)
T 2ctz_A 150 VESIGNPALNIPD---LEALAQAAREKGVALIV 179 (421)
T ss_dssp EESSCTTTCCCCC---HHHHHHHHHHHTCEEEE
T ss_pred EECCCCCCCcccC---HHHHHHHHHHcCCEEEE
Confidence 233433 344444 45788899999998886
No 178
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=50.31 E-value=57 Score=33.93 Aligned_cols=115 Identities=17% Similarity=0.171 Sum_probs=61.8
Q ss_pred HHhhccC-CCeEEEe-cCchHHHHHHHHH---HH-c-CC-eeEEEEc-CCC---CchhH-HHHHHHHHhCCCcEE-EEcc
Q psy17541 519 FHNKLAN-DDVILTY-GCSSLVEKILLTA---HE-K-GT-KFRVIIV-DGS---PWYEG-KEMLRRLVKHQVDCS-YVLL 584 (717)
Q Consensus 519 A~e~I~d-GdvILTy-g~SStV~~vL~~A---~e-~-Gk-~FrVIVv-ESR---P~~EG-r~lA~~L~~~GI~vT-yI~D 584 (717)
..++|.. +-++|-- +-.++++..++.| .+ . |- -+++.|. |.| |...+ ...++.|.+.|+.+- |+.|
T Consensus 65 ~~~~i~~~~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~d 144 (265)
T 1wv2_A 65 LLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSD 144 (265)
T ss_dssp -----CTTTSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECS
T ss_pred HHhhhhhcCCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3455654 5566643 2233445555544 33 1 33 3577666 555 44444 578999999999988 6775
Q ss_pred h-HHHHHhhh--ccEEEE-ceeeEecCCCeecccchHHHHHHHHhCCCcEEecccCC
Q psy17541 585 S-AVSYIMRE--VSKVII-GAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 585 S-AVsyiM~~--VdkVLL-GAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
+ .++.-+.+ ++.|+- |+. |-.+=++.+ -..|..+....++|||+-+.-.
T Consensus 145 d~~~akrl~~~G~~aVmPlg~p-IGsG~Gi~~---~~lI~~I~e~~~vPVI~eGGI~ 197 (265)
T 1wv2_A 145 DPIIARQLAEIGCIAVMPLAGL-IGSGLGICN---PYNLRIILEEAKVPVLVDAGVG 197 (265)
T ss_dssp CHHHHHHHHHSCCSEEEECSSS-TTCCCCCSC---HHHHHHHHHHCSSCBEEESCCC
T ss_pred CHHHHHHHHHhCCCEEEeCCcc-CCCCCCcCC---HHHHHHHHhcCCCCEEEeCCCC
Confidence 5 44555543 444444 321 111102222 3466777778899999855433
No 179
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=49.60 E-value=41 Score=32.65 Aligned_cols=102 Identities=15% Similarity=0.070 Sum_probs=58.8
Q ss_pred eEEEecCchHHHHHHHHHH-HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEceee
Q psy17541 528 VILTYGCSSLVEKILLTAH-EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--L-SAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~-e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--D-SAVsyiM~~VdkVLLGAda 603 (717)
+||+.|-+..|-..|.... +....++|+++.-++.. +..|...++.+...- | .++..++.++|.||.-|-.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~-----~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 76 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK-----ASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGP 76 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTT-----THHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHH-----HhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCC
Confidence 5788888777665555443 33113567766544422 123444566543322 1 4566777888888765432
Q ss_pred EecCCCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 604 LLSNGAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 604 VlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
- -+.-+|-.|+..+.-+|+..+++-+|...+
T Consensus 77 ~--~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss 107 (287)
T 2jl1_A 77 H--YDNTLLIVQHANVVKAARDAGVKHIAYTGY 107 (287)
T ss_dssp C--SCHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred C--cCchHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 1 111236678888888888888865554443
No 180
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=49.56 E-value=65 Score=33.34 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=53.5
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHHH-HHhCCCcEEEEcchH---HHHHhh-hccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLRR-LVKHQVDCSYVLLSA---VSYIMR-EVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~~-L~~~GI~vTyI~DSA---VsyiM~-~VdkVLLG 600 (717)
+.|++-+-+..+..+|..+...|. +|++.+ |.+.|. ..... +...|+.+.++.... +...+. +...|++
T Consensus 76 ~~i~~~sG~~ai~~~~~~~~~~gd--~vl~~~--~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 150 (389)
T 3acz_A 76 GSAAFGSGMGAISSSTLAFLQKGD--HLIAGD--TLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYL- 150 (389)
T ss_dssp EEEEESSHHHHHHHHHTTTCCTTC--EEEEES--SCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEE-
T ss_pred eEEEeCCHHHHHHHHHHHHhCCCC--EEEEeC--CCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEE-
Confidence 456655544444444443333343 566644 566663 33333 567899999987433 333333 3344444
Q ss_pred eeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
...--..|.++. --.|+-+|+.++++|+|
T Consensus 151 ~~~~nptG~~~~---l~~i~~~~~~~~~~liv 179 (389)
T 3acz_A 151 ESPANPTCKVSD---IKGIAVVCHERGARLVV 179 (389)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHHHHTCEEEE
T ss_pred ECCCCCCCeecC---HHHHHHHHHHcCCEEEE
Confidence 222222354443 35678889999998876
No 181
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=49.36 E-value=82 Score=32.60 Aligned_cols=100 Identities=15% Similarity=0.076 Sum_probs=54.3
Q ss_pred CeEEEecCchHHHHHHH--HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh--
Q psy17541 527 DVILTYGCSSLVEKILL--TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL----------SAVSYIMR-- 592 (717)
Q Consensus 527 dvILTyg~SStV~~vL~--~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D----------SAVsyiM~-- 592 (717)
.+++|.|.+..+..++. .....|. +|+|.+ |.+.+.. ..+...|+.+.++.. ..+-..+.
T Consensus 119 ~i~~t~G~t~al~~~~~~~~~~~~gd--~Vlv~~--p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 192 (420)
T 4f4e_A 119 VTAQALGGTGALKIGADFLRTLNPKA--KVAISD--PSWENHR--ALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGY 192 (420)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHCTTC--CEEEEE--SCCHHHH--HHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTC
T ss_pred EEEECCccHHHHHHHHHHHHHhCCCC--EEEEeC--CCcHhHH--HHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhC
Confidence 57888888877666643 2233343 455543 7676642 334457887777653 12333333
Q ss_pred -hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 -EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.-+++++=...--..|.+++.---..|+-+|+.|++.|++
T Consensus 193 ~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 233 (420)
T 4f4e_A 193 EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFL 233 (420)
T ss_dssp CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEE
Confidence 1223333222222345555444444777788888887776
No 182
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=49.35 E-value=47 Score=32.11 Aligned_cols=100 Identities=12% Similarity=0.127 Sum_probs=52.7
Q ss_pred eEEEecCchHHHHHHHHHH-HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEceee
Q psy17541 528 VILTYGCSSLVEKILLTAH-EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--L-SAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~-e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--D-SAVsyiM~~VdkVLLGAda 603 (717)
+||+.|-+..|-..|.... +....++|+++.-+|... ..|...++.+...- | .++..++..+|.||.-|-.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKA-----QALAAQGITVRQADYGDEAALTSALQGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTC-----HHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhh-----hhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 3677787776665555443 331135666665444321 23334565443321 1 4566677778877764432
Q ss_pred EecCCCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 604 LLSNGAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 604 VlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
. .+ .|-.||..+.-+|+..+++-+|...+
T Consensus 76 ~-~~---~~~~~~~~l~~a~~~~~~~~~v~~Ss 104 (286)
T 2zcu_A 76 E-VG---QRAPQHRNVINAAKAAGVKFIAYTSL 104 (286)
T ss_dssp ----------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred C-ch---HHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 1 11 35567888877777777765554433
No 183
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=49.31 E-value=77 Score=32.04 Aligned_cols=102 Identities=13% Similarity=0.147 Sum_probs=55.8
Q ss_pred cCCC-eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch----------HHHHHhh
Q psy17541 524 ANDD-VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS----------AVSYIMR 592 (717)
Q Consensus 524 ~dGd-vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS----------AVsyiM~ 592 (717)
.... +++|.|-+..+..++..+...|. +|++.+ |.+.|... .+...|+.+..+... .+-..+.
T Consensus 85 ~~~~~v~~~~g~~~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 158 (389)
T 1gd9_A 85 DPKTEIMVLLGANQAFLMGLSAFLKDGE--EVLIPT--PAFVSYAP--AVILAGGKPVEVPTYEEDEFRLNVDELKKYVT 158 (389)
T ss_dssp CTTTSEEEESSTTHHHHHHHTTTCCTTC--EEEEEE--SCCTTHHH--HHHHHTCEEEEEECCGGGTTCCCHHHHHHHCC
T ss_pred CCCCeEEEcCChHHHHHHHHHHhCCCCC--EEEEcC--CCchhHHH--HHHHCCCEEEEeccCCccCCCCCHHHHHHhcC
Confidence 3456 88888888887766665543342 455543 55666432 234468888777621 1222222
Q ss_pred -hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 -EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++..|++ ...--..|.++..-=-..++-+|+.||+.+++
T Consensus 159 ~~~~~v~~-~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 198 (389)
T 1gd9_A 159 DKTRALII-NSPCNPTGAVLTKKDLEEIADFVVEHDLIVIS 198 (389)
T ss_dssp TTEEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred cCceEEEE-ECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3334443 22111234444333234567788999998876
No 184
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=49.17 E-value=51 Score=34.39 Aligned_cols=97 Identities=14% Similarity=0.169 Sum_probs=54.0
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHH--HHHHhCCCcEEEEcc--hHHHHHhh-hccEEEEce
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEML--RRLVKHQVDCSYVLL--SAVSYIMR-EVSKVIIGA 601 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA--~~L~~~GI~vTyI~D--SAVsyiM~-~VdkVLLGA 601 (717)
+.|++-+-+..+..+|. ....|. +|++.+ |.+.|.... ..+...|+.+.++.. ..+-..+. +...|++ .
T Consensus 72 ~~i~~~sGt~a~~~al~-~~~~gd--~Vi~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~l~~~i~~~t~lv~~-~ 145 (393)
T 1n8p_A 72 YGLAFSSGSATTATILQ-SLPQGS--HAVSIG--DVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQLIKENTKLVWI-E 145 (393)
T ss_dssp EEEEESCHHHHHHHHHH-TSCSSC--EEEEES--SCCHHHHHHHHHTSTTTCSCCEEESSHHHHHHHHSCSSEEEEEE-C
T ss_pred cEEEECChHHHHHHHHH-HcCCCC--EEEEeC--CCchHHHHHHHHHHHHcCcEEEEeCCChHHHHHhcccCceEEEE-E
Confidence 45555444555555555 433342 566654 777764222 245668999999974 33444443 3334443 2
Q ss_pred eeEecCCCeecccchHHHHHHHHhC----CCcEEe
Q psy17541 602 HALLSNGAVMSRAGTAQVSLVARAF----NVPVLA 632 (717)
Q Consensus 602 daVlaNG~VvNKiGT~~VALaAK~~----~VPVyV 632 (717)
..--..|.++. -..|+-+|+++ +++|+|
T Consensus 146 ~~~nptG~~~~---l~~i~~la~~~~~~~~~~liv 177 (393)
T 1n8p_A 146 TPTNPTLKVTD---IQKVADLIKKHAAGQDVILVV 177 (393)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEE
T ss_pred CCCCCcceecC---HHHHHHHHHHhCCCCCCEEEE
Confidence 22223344442 35677788898 988876
No 185
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=48.40 E-value=1e+02 Score=31.16 Aligned_cols=96 Identities=11% Similarity=0.123 Sum_probs=55.3
Q ss_pred EEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hccEEE
Q psy17541 529 ILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMR--EVSKVI 598 (717)
Q Consensus 529 ILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~--~VdkVL 598 (717)
++|-|-+..+..+|..+...|. +|++.+ |.+-|..+...+...|+.+..+.. .++-..+. ++..|+
T Consensus 68 ~~~~sgt~al~~~~~~~~~~gd--~Vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~ 143 (411)
T 3nnk_A 68 LVDGTSRAGIEAILVSAIRPGD--KVLVPV--FGRFGHLLCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLL 143 (411)
T ss_dssp EEESCHHHHHHHHHHHHCCTTC--EEEEEE--CSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEE
T ss_pred EECCCcHHHHHHHHHHhcCCCC--EEEEec--CCchHHHHHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEE
Confidence 3443444555555555543343 566544 556665466667778998888763 23444443 456665
Q ss_pred EceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 599 IGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 599 LGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+-. .-...|.+.. + -.|+-+|+.|++.|+|
T Consensus 144 ~~~-~~nptG~~~~-l--~~i~~l~~~~~~~li~ 173 (411)
T 3nnk_A 144 TVQ-GDTSTTMLQP-L--AELGEICRRYDALFYT 173 (411)
T ss_dssp EES-EETTTTEECC-C--TTHHHHHHHHTCEEEE
T ss_pred EeC-CCCCcceecc-H--HHHHHHHHHcCCEEEE
Confidence 532 2223454443 2 3577888999998876
No 186
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=48.27 E-value=64 Score=33.53 Aligned_cols=93 Identities=16% Similarity=0.205 Sum_probs=58.6
Q ss_pred HHhhc--cCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHh-CCCcEEEEcchHHHHHhhhcc
Q psy17541 519 FHNKL--ANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVK-HQVDCSYVLLSAVSYIMREVS 595 (717)
Q Consensus 519 A~e~I--~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~-~GI~vTyI~DSAVsyiM~~Vd 595 (717)
+.+++ .+..+|+.+|.+..-...+........--+|+|.+-. ....++.+|.+ .|+++... .+..++.++|
T Consensus 112 aa~~La~~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---~a~~la~~l~~~~g~~~~~~---~~~eav~~aD 185 (313)
T 3hdj_A 112 AAGALARPRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---ASPEILERIGRRCGVPARMA---APADIAAQAD 185 (313)
T ss_dssp HHHHHSCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---CCHHHHHHHHHHHTSCEEEC---CHHHHHHHCS
T ss_pred HHHhhccCCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---HHHHHHHHHHHhcCCeEEEe---CHHHHHhhCC
Confidence 44444 3567899999987655555544432223366666655 44567777764 48887665 4566678999
Q ss_pred EEEEceee--------EecCCCeecccchH
Q psy17541 596 KVIIGAHA--------LLSNGAVMSRAGTA 617 (717)
Q Consensus 596 kVLLGAda--------VlaNG~VvNKiGT~ 617 (717)
.|+.-.-+ .+..|.+++-+|++
T Consensus 186 IVi~aT~s~~pvl~~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 186 IVVTATRSTTPLFAGQALRAGAFVGAIGSS 215 (313)
T ss_dssp EEEECCCCSSCSSCGGGCCTTCEEEECCCS
T ss_pred EEEEccCCCCcccCHHHcCCCcEEEECCCC
Confidence 99864321 24456777777765
No 187
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=48.01 E-value=52 Score=33.37 Aligned_cols=100 Identities=19% Similarity=0.264 Sum_probs=56.1
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------------hHHHHHh
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------------SAVSYIM 591 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------------SAVsyiM 591 (717)
..+++|-|.+..+..++..+...|. +|++. .|.+.+.. ..+...|..+..+.. ..+-..+
T Consensus 103 ~~i~~~~g~~~a~~~~~~~l~~~gd--~vl~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 176 (407)
T 3nra_A 103 DGLIITPGTQGALFLAVAATVARGD--KVAIV--QPDYFANR--KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAF 176 (407)
T ss_dssp TSEEEESHHHHHHHHHHHTTCCTTC--EEEEE--ESCCTHHH--HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHH
T ss_pred CcEEEeCCcHHHHHHHHHHhCCCCC--EEEEc--CCcccchH--HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHH
Confidence 4677777777766665554433333 45553 35565532 334456887777653 2333333
Q ss_pred h-hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 592 R-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 592 ~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
. +...|++ .+.-...|.++..----.|+-+|+.|++.++|
T Consensus 177 ~~~~~~v~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 217 (407)
T 3nra_A 177 KAGARVFLF-SNPNNPAGVVYSAEEIGQIAALAARYGATVIA 217 (407)
T ss_dssp HTTCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred hhCCcEEEE-cCCCCCCCcccCHHHHHHHHHHHHHcCCEEEE
Confidence 3 3555544 22222345555544445677788999998886
No 188
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=47.88 E-value=32 Score=40.52 Aligned_cols=84 Identities=18% Similarity=0.118 Sum_probs=50.2
Q ss_pred HHHHHHHHhhccC---CCeEEEecCchHH--HHHHHHHHHcC---------CeeEEEEcCCCCchhHHHHHHHHHhCC--
Q psy17541 513 NAICMFFHNKLAN---DDVILTYGCSSLV--EKILLTAHEKG---------TKFRVIIVDGSPWYEGKEMLRRLVKHQ-- 576 (717)
Q Consensus 513 e~Ia~~A~e~I~d---GdvILTyg~SStV--~~vL~~A~e~G---------k~FrVIVvESRP~~EGr~lA~~L~~~G-- 576 (717)
++|.....+++.+ +.+||..|.++-+ ..+|..+...| ..++||.+|..|.-.- .++.....|
T Consensus 394 ~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~--~l~~~~~Ng~~ 471 (745)
T 3ua3_A 394 EAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIV--TLKYMNVRTWK 471 (745)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHH--HHHHHHHHTTT
T ss_pred HHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHH--HHHHHHhcCCC
Confidence 4555555556543 3489999887644 44566655455 6789999999885442 333333333
Q ss_pred CcEEEEcchHHHHHh-------hhccEEE
Q psy17541 577 VDCSYVLLSAVSYIM-------REVSKVI 598 (717)
Q Consensus 577 I~vTyI~DSAVsyiM-------~~VdkVL 598 (717)
=.|++|.--+=-+-+ .+||.+|
T Consensus 472 d~VtVI~gd~eev~lp~~~~~~ekVDIIV 500 (745)
T 3ua3_A 472 RRVTIIESDMRSLPGIAKDRGFEQPDIIV 500 (745)
T ss_dssp TCSEEEESCGGGHHHHHHHTTCCCCSEEE
T ss_pred CeEEEEeCchhhcccccccCCCCcccEEE
Confidence 347777744433333 4688775
No 189
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=47.78 E-value=1.4e+02 Score=31.12 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=54.2
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHH-HHHhCCCcEEEEcc---hHHHHHhh-hccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLR-RLVKHQVDCSYVLL---SAVSYIMR-EVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~-~L~~~GI~vTyI~D---SAVsyiM~-~VdkVLLG 600 (717)
+.|++-|.+..+..++......|. +|++. .|.+.+. .... .+...|+.+.++.. ..+-..+. ++..|++
T Consensus 79 ~~i~~~~g~~ai~~~~~~l~~~gd--~Vl~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l- 153 (404)
T 1e5e_A 79 ACVATSSGMGAIAATVLTILKAGD--HLISD--ECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYF- 153 (404)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTC--EEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEE-
T ss_pred cEEEeCChHHHHHHHHHHHhCCCC--EEEEe--CCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEE-
Confidence 456555555554444444433343 55554 5666663 2222 46678999999864 34444443 3334443
Q ss_pred eeeEecCCCeecccchHHHHHHHHh-CCCcEEe
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARA-FNVPVLA 632 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~-~~VPVyV 632 (717)
..---..|.++. --.|+-+|++ ++++|+|
T Consensus 154 ~~p~NptG~v~~---l~~i~~la~~~~~~~li~ 183 (404)
T 1e5e_A 154 ETPANPTLKIID---MERVCKDAHSQEGVLVIA 183 (404)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHHTSTTCEEEE
T ss_pred ECCCCCCCcccC---HHHHHHHHHhhcCCEEEE
Confidence 211123455543 3567888999 9998876
No 190
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=47.70 E-value=85 Score=31.33 Aligned_cols=108 Identities=19% Similarity=0.163 Sum_probs=54.7
Q ss_pred CeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCch-----hHHHHHHHHHh---CCCcEEEEc--c-hHHHHHhh--
Q psy17541 527 DVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWY-----EGKEMLRRLVK---HQVDCSYVL--L-SAVSYIMR-- 592 (717)
Q Consensus 527 dvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~-----EGr~lA~~L~~---~GI~vTyI~--D-SAVsyiM~-- 592 (717)
.+||+.|-+..|-..|. .+.+.| .+|++++-.+.. +....+..|.. .++.+...- | .++..++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAG--YLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT--CCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC--CEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence 57888887776655444 444556 456665432211 01122333332 344332221 1 34555666
Q ss_pred hccEEEEceeeEecC--------CCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 593 EVSKVIIGAHALLSN--------GAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 593 ~VdkVLLGAdaVlaN--------G~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
++|.||--|-..... -.-+|-.||..+.-+|+..++.-+|...+
T Consensus 81 ~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 132 (348)
T 1ek6_A 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSS 132 (348)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 455555443211000 00135678999998898889876665444
No 191
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=47.65 E-value=1e+02 Score=31.71 Aligned_cols=98 Identities=18% Similarity=0.206 Sum_probs=54.1
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHHH-HHhCCCcEEEEcchHHHH---Hhh-hccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLRR-LVKHQVDCSYVLLSAVSY---IMR-EVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~~-L~~~GI~vTyI~DSAVsy---iM~-~VdkVLLG 600 (717)
+.|++-+-+..+..+|..+...|. +|++. .|.+.|. ..+.. +...|+.+.++....+.. .+. ++..|++
T Consensus 81 ~~i~~~sG~~a~~~~l~~~~~~gd--~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~- 155 (398)
T 2rfv_A 81 AGLATASGISAITTTLLTLCQQGD--HIVSA--SAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYI- 155 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTC--EEEEE--SSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEE-
T ss_pred cEEEECCHHHHHHHHHHHHhCCCC--EEEEc--CCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEE-
Confidence 566666555555555555543343 55554 5666664 23322 366899999887533333 332 3334443
Q ss_pred eeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
...--..|.++. -..|+-+|++||++|++
T Consensus 156 ~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 184 (398)
T 2rfv_A 156 ETPANPTLSLVD---IETVAGIAHQQGALLVV 184 (398)
T ss_dssp ESSBTTTTBCCC---HHHHHHHHHHTTCEEEE
T ss_pred ECCCCCCCcccC---HHHHHHHHHHcCCEEEE
Confidence 222222354443 45678889999998876
No 192
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=47.61 E-value=77 Score=32.24 Aligned_cols=100 Identities=13% Similarity=0.227 Sum_probs=57.1
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch-------------------H
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-------------------A 586 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-------------------A 586 (717)
..+++|.|.+..+..++..+...|. +|++. .|.+.+.. ..+...|+.+.++... .
T Consensus 86 ~~i~~~~g~~~a~~~~~~~~~~~gd--~vl~~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~ 159 (410)
T 3e2y_A 86 EEILVAVGAYGSLFNSIQGLVDPGD--EVIIM--VPFYDCYE--PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRE 159 (410)
T ss_dssp TSEEEESHHHHHHHHHHHHHCCTTC--EEEEE--ESCCTTHH--HHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHH
T ss_pred CCEEEeCCcHHHHHHHHHHhcCCCC--EEEEe--CCCchhhH--HHHHHcCCEEEEEeccccccccccccccCCcCCHHH
Confidence 4688888888877777766644443 45553 45555543 2344568877776532 2
Q ss_pred HHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 587 VSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 587 VsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+-..+. ++..|+|- ..--..|.++..---..|+-+|+.|++.|++
T Consensus 160 l~~~~~~~~~~v~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 205 (410)
T 3e2y_A 160 LESKFSSKTKAIILN-TPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205 (410)
T ss_dssp HHTTCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhhcCCCceEEEEe-CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEE
Confidence 222222 34445442 2222345555444445677789999998876
No 193
>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} PDB: 3qdq_A*
Probab=47.54 E-value=37 Score=37.54 Aligned_cols=94 Identities=14% Similarity=0.215 Sum_probs=58.0
Q ss_pred HHhhccCCCeEEEecCch---HHHHHHHHHHHcCCeeEEEEcCC-------CC----------chhHHHHHHHHHhCC-C
Q psy17541 519 FHNKLANDDVILTYGCSS---LVEKILLTAHEKGTKFRVIIVDG-------SP----------WYEGKEMLRRLVKHQ-V 577 (717)
Q Consensus 519 A~e~I~dGdvILTyg~SS---tV~~vL~~A~e~Gk~FrVIVvES-------RP----------~~EGr~lA~~L~~~G-I 577 (717)
|..+|++|++|..++... .|...|....+.-+.++|+-.=| .| ++-|-. .+.+...| +
T Consensus 17 A~~~ik~G~~v~~~~~~~~p~~l~~al~~~~~~l~~v~l~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~i~~G~~ 95 (448)
T 3gk7_A 17 AVKSIKSGDRVLFAHCVAEPPVLVEAMVANAAAYKNVTVSHMVTLGKGEYSKPEYKENFTFEGWFTSPS-TRGSIAEGHG 95 (448)
T ss_dssp HGGGCCTTCEEEECSGGGCCHHHHHHHHHTGGGCSSEEEEESSCSSCCGGGSGGGTTTEEEEESSCCTT-THHHHHHTSS
T ss_pred HHHhCCCcCEEEECCCCCCHHHHHHHHHHHHHhhcCeEEEEeeccCCccccChHHhCcEEEecCcCCHH-HHhHHhCCCe
Confidence 455999999999986543 45555543333335577764311 11 222222 34444455 3
Q ss_pred cEEEEcchHHHHHhh----hccEEEEceeeEecCCCeecc
Q psy17541 578 DCSYVLLSAVSYIMR----EVSKVIIGAHALLSNGAVMSR 613 (717)
Q Consensus 578 ~vTyI~DSAVsyiM~----~VdkVLLGAdaVlaNG~VvNK 613 (717)
+..-+..+.+..++. .+|.+|+.|...-.+|.+.-.
T Consensus 96 ~~~p~~ls~~p~~~~~g~~~~DVAli~as~~D~~Gn~s~g 135 (448)
T 3gk7_A 96 QFVPVFFHEVPSLIRKDIFHVDVFMVMVSPPDHNGFCCVG 135 (448)
T ss_dssp EECCCCGGGHHHHHHTTTTCCSEEEEEECCCCTTSEEECC
T ss_pred eEECchHHhHHHHHHhCCCCCCEEEEEEecCCCCCcEEec
Confidence 333355677887776 489999999999999988643
No 194
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=46.96 E-value=17 Score=37.94 Aligned_cols=107 Identities=12% Similarity=0.198 Sum_probs=56.9
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHcCC------------eeEEEEcCCCCchhHHHHH----HHHHhCCCcEEEEc----
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEKGT------------KFRVIIVDGSPWYEGKEML----RRLVKHQVDCSYVL---- 583 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~Gk------------~FrVIVvESRP~~EGr~lA----~~L~~~GI~vTyI~---- 583 (717)
....+|+|-|.+..+..++..+...|. .-+|++++ .|.+.+...+ ..|...|+.+..+.
T Consensus 105 ~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (444)
T 3if2_A 105 TSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPL-TPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGE 183 (444)
T ss_dssp CGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESS-SSCCGGGTTCCSSSCCEEECCCEEEEEEETTE
T ss_pred CHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeC-CCCccchhhcccccchhhccCceEEecccccc
Confidence 344688888877776655555433332 01466654 2444443211 13556777776655
Q ss_pred --------c-hHHHHH---h-hhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 584 --------L-SAVSYI---M-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 584 --------D-SAVsyi---M-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
| .++-.. + +++..|++- ..--..|.++..---..|+-+|+.|+++|++
T Consensus 184 ~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 244 (444)
T 3if2_A 184 EGFFKYRVDFEALENLPALKEGRIGAICCS-RPTNPTGNVLTDEEMAHLAEIAKRYDIPLII 244 (444)
T ss_dssp EEEEEEECCHHHHHTCHHHHTTCEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred cCccccCCCHHHHHHHHHhcCCCceEEEeC-CCCCCCCCcCCHHHHHHHHHHHHHCCCEEEE
Confidence 1 122222 1 234455442 1222345555544455677789999999886
No 195
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=46.76 E-value=1.4e+02 Score=30.62 Aligned_cols=99 Identities=23% Similarity=0.358 Sum_probs=54.3
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-----------hHHHHHhh-hc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-----------SAVSYIMR-EV 594 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-----------SAVsyiM~-~V 594 (717)
.+++|-|.+..+..++..+...|. +|++. .|.+.|.. ..+...|+.+..+.. .++-..+. ++
T Consensus 88 ~v~~t~g~~~al~~~~~~~~~~gd--~Vl~~--~~~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~ 161 (411)
T 2o0r_A 88 EVLVTVGATEAIAAAVLGLVEPGS--EVLLI--EPFYDSYS--PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRT 161 (411)
T ss_dssp SEEEEEHHHHHHHHHHHHHCCTTC--EEEEE--ESCCTTHH--HHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTE
T ss_pred eEEEeCCHHHHHHHHHHHhcCCCC--EEEEe--CCCcHhHH--HHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCc
Confidence 688888888887776666543343 45554 35555543 234567888776652 12333332 33
Q ss_pred cEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 595 SKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
..|++- ..--..|.++..-=-..|+-+|+.+|+.+++
T Consensus 162 ~~v~l~-~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 198 (411)
T 2o0r_A 162 RALIIN-SPHNPTGAVLSATELAAIAEIAVAANLVVIT 198 (411)
T ss_dssp EEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEe-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 344332 1111234333321124677788999998876
No 196
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=46.69 E-value=47 Score=34.11 Aligned_cols=100 Identities=11% Similarity=0.113 Sum_probs=54.3
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCc-EEEEcchHH-HHH--h---hhccEE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVD-CSYVLLSAV-SYI--M---REVSKV 597 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~-vTyI~DSAV-syi--M---~~VdkV 597 (717)
...+++|-|.+..+.. +..+...|. +|++. .|.+.|... .+...|+. +.+++...- .+. + .++..|
T Consensus 95 ~~~v~~~~G~~~al~~-~~~~~~~gd--~Vl~~--~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 167 (400)
T 3asa_A 95 AKEIFISDGAKVDLFR-LLSFFGPNQ--TVAIQ--DPSYPAYLD--IARLTGAKEIIALPCLQENAFFPEFPEDTHIDIL 167 (400)
T ss_dssp GGGEEEESCHHHHHHH-HHHHHCSSC--EEEEE--ESCCHHHHH--HHHHTTCSEEEEEECCGGGTTCCCCCTTCCCSEE
T ss_pred HHHEEEccChHHHHHH-HHHHcCCCC--EEEEC--CCCcHHHHH--HHHHcCCcceEecccchhcCcccChhhccCccEE
Confidence 3467888887766555 444544443 45554 377777533 34557888 887763221 111 1 234555
Q ss_pred EEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 598 IIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 598 LLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+|- ..-...|.++..-==..|+-+|+.+++.+++
T Consensus 168 ~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (400)
T 3asa_A 168 CLC-SPNNPTGTVLNKDQLRAIVHYAIEHEILILF 201 (400)
T ss_dssp EEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEe-CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 553 2222235444432223467778999997764
No 197
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=46.62 E-value=1.1e+02 Score=31.75 Aligned_cols=100 Identities=15% Similarity=0.209 Sum_probs=53.6
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-------hHHHHHhh-------
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-------SAVSYIMR------- 592 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-------SAVsyiM~------- 592 (717)
.+++|.|.+..+..++......|. +|+|. .|.+.|.. ..+...|+.+..+.. ..+-..+.
T Consensus 110 ~i~~t~G~~~al~~~~~~l~~~gd--~Vlv~--~p~y~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~ 183 (425)
T 2r2n_A 110 DLCVTSGSQQGLCKVFEMIINPGD--NVLLD--EPAYSGTL--QSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDA 183 (425)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTC--EEEEE--SSCCHHHH--HHHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTS
T ss_pred cEEEeCcHHHHHHHHHHHhCCCCC--EEEEe--CCCcHHHH--HHHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhcccc
Confidence 578888877776666655543443 45553 47777643 334557888877752 23444443
Q ss_pred ------hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 ------EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 ------~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++..|++=..--...|.++..-==..|+-+|+.|++.|++
T Consensus 184 ~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~ 229 (425)
T 2r2n_A 184 KNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIE 229 (425)
T ss_dssp SSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred ccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 1223322111111224444332222677788999987665
No 198
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=46.53 E-value=31 Score=35.34 Aligned_cols=113 Identities=12% Similarity=0.076 Sum_probs=62.1
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEE-EcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEce-----
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVI-IVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGA----- 601 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVI-VvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGA----- 601 (717)
.|..+|.+......+ .+. ...++|+ |+|..|......++..+.+.|+++....|-.-..--+++|.|++..
T Consensus 4 rvgiiG~G~~~~~~~-~~l--~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H 80 (337)
T 3ip3_A 4 KICVIGSSGHFRYAL-EGL--DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLN 80 (337)
T ss_dssp EEEEECSSSCHHHHH-TTC--CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHHH
T ss_pred EEEEEccchhHHHHH-Hhc--CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcchH
Confidence 466677654333222 222 4556666 6776664444556666777788666555432222224699998853
Q ss_pred ------------eeEecCCCeecccchHHHHHHHHhCCCcE-EecccCCcccccc
Q psy17541 602 ------------HALLSNGAVMSRAGTAQVSLVARAFNVPV-LAACETHKFCERV 643 (717)
Q Consensus 602 ------------daVlaNG~VvNKiGT~~VALaAK~~~VPV-yV~cEtyKFs~rv 643 (717)
|.+++-=-..+.-....+.-+|+..++++ +.++..+.|.+.+
T Consensus 81 ~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~R~~p~~ 135 (337)
T 3ip3_A 81 GKILLEALERKIHAFVEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGIRYRPHF 135 (337)
T ss_dssp HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGGGGSHHH
T ss_pred HHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCceEEEecccccCCHHH
Confidence 32322222233445556666777777773 3445556676654
No 199
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=46.51 E-value=43 Score=37.48 Aligned_cols=147 Identities=15% Similarity=0.103 Sum_probs=82.2
Q ss_pred HHHHHHHHHhhc------cCCCeEEEecC---chHHHHHHHHH-HHcCCeeEE---EEcCCCCchhHHHHHHHHHhCCC-
Q psy17541 512 GNAICMFFHNKL------ANDDVILTYGC---SSLVEKILLTA-HEKGTKFRV---IIVDGSPWYEGKEMLRRLVKHQV- 577 (717)
Q Consensus 512 ~e~Ia~~A~e~I------~dGdvILTyg~---SStV~~vL~~A-~e~Gk~FrV---IVvESRP~~EGr~lA~~L~~~GI- 577 (717)
.+.|+.+++++| .|| -.|=+|- +.+|...|..- .+-+..=++ -+.+ ....|.+.|+
T Consensus 250 ~~~IA~~~a~~i~~~g~~~dG-~~lqlGIG~ip~aV~~~l~~~~~~l~i~se~g~~g~~d---------~~~~l~e~G~i 319 (509)
T 1xr4_A 250 ELLIARQAANVIEHSGYFCDG-FSLQTGTGGASLAVTRFLEDKMRRHNITASFGLGGITG---------TMVDLHEKGLI 319 (509)
T ss_dssp HHHHHHHHHHHHHTTSCCSTT-EEEECCSSHHHHHHHHHHHHHHHHTTCCEEEEEEEECH---------HHHHHHHTTSB
T ss_pred HHHHHHHHHHHHHhcCcCCCC-CEEEeccChHHHHHHHHhhhhcccceeecccccCCcCC---------ccHhHHhCCCc
Confidence 467888888888 999 4444444 45677777765 444443333 1111 2245666664
Q ss_pred ----cEEEEcchHH-----------------------HHHhhhccEEEEceeeEecCCCeeccc--c---------hHHH
Q psy17541 578 ----DCSYVLLSAV-----------------------SYIMREVSKVIIGAHALLSNGAVMSRA--G---------TAQV 619 (717)
Q Consensus 578 ----~vTyI~DSAV-----------------------syiM~~VdkVLLGAdaVlaNG~VvNKi--G---------T~~V 619 (717)
++.-....+. +++..+.|..|+||==|-.+|.|.+-. | ...+
T Consensus 320 ~~~~~~~~f~~g~~~~~~~n~~~~~~~~~~~~n~~~~~~~~~~ldiai~galevD~~G~vn~~~~~~g~~~~G~GG~~D~ 399 (509)
T 1xr4_A 320 KALLDTQSFDGDAARSLAQNPHHIEISTNQYANPASKGAACERLNVVMLSALEIDVNFNVNVMTGSNGVLRGASGGHSDT 399 (509)
T ss_dssp SCEEEEEECSHHHHHHHHHCTTEEECCHHHHTCTTCSCCGGGGCSEEEECCSEECTTCCEECSBCTTSCBCSBCTTHHHH
T ss_pred cCCcceeEeeccHHHHHHhCCcceEEeccccccCcchhhhhcCCCeEEeeeEEEccCCceeeeeccCCeEecccccHHHH
Confidence 1211111111 123356799999998888888776665 2 2333
Q ss_pred HHHHHhCCCcEEecccCCcccccccCCcccccccCCccccccccccccccccCCCccccccceeccCCCCccEEEeCCCC
Q psy17541 620 SLVARAFNVPVLAACETHKFCERVQTDALVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAI 699 (717)
Q Consensus 620 ALaAK~~~VPVyV~cEtyKFs~rv~~Ds~v~NEl~dP~EL~~~~~~l~~~~~~~~l~vlNp~FDvTPPeLIT~IITE~GI 699 (717)
+.-|+. ++|+.++.. + +.| .++ +.+ ..=.||-+.|+.||||.|+
T Consensus 400 ~~gA~~----sii~~~~t~-------~-------~~s-kIV------------~~~-----~~v~t~~~~V~~iVTE~Gv 443 (509)
T 1xr4_A 400 AAGADL----TIITAPLVR-------G-------RIP-CVV------------EKV-----LTTVTPGASVDVLVTDHGI 443 (509)
T ss_dssp HHHSSE----EEEECCSEE-------T-------TEE-SBC------------SSC-----SSCSBCGGGCCEEEETTEE
T ss_pred hhccCe----EEEEEcccC-------C-------CCC-eEe------------eCC-----CCcccCcCeeCEEECCcEE
Confidence 444442 466655431 0 000 111 111 2345778999999999999
Q ss_pred cC-CCC
Q psy17541 700 VP-CTS 704 (717)
Q Consensus 700 lp-PsS 704 (717)
+. +..
T Consensus 444 a~~l~g 449 (509)
T 1xr4_A 444 AVNPAR 449 (509)
T ss_dssp EECTTC
T ss_pred EEcCCC
Confidence 98 543
No 200
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=46.40 E-value=56 Score=30.53 Aligned_cols=100 Identities=16% Similarity=0.053 Sum_probs=60.0
Q ss_pred CeEEEecCchHHHHHHHHH-HHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhhhccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTA-HEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMREVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A-~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~~VdkVLLG 600 (717)
.+||+.|-+..|-..|... .+.| ++|+++.-+|.... .+ ..+ +.++. | .++..++.++|.||.-
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~-----~~-~~~--~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 74 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG--FEVTAVVRHPEKIK-----IE-NEH--LKVKKADVSSLDEVCEVCKGADAVISA 74 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT--CEEEEECSCGGGCC-----CC-CTT--EEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC--CEEEEEEcCcccch-----hc-cCc--eEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence 5789999888776665544 4445 67887766543211 01 023 33332 2 3466677788888876
Q ss_pred eeeEecCCC--eecccchHHHHHHHHhCCCcEEecccC
Q psy17541 601 AHALLSNGA--VMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 601 AdaVlaNG~--VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
|-....+.. -.|-.|+..+.-+|+..+++-+|...+
T Consensus 75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss 112 (227)
T 3dhn_A 75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGG 112 (227)
T ss_dssp CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 633222111 127889999999999999876665544
No 201
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=46.29 E-value=1.2e+02 Score=30.47 Aligned_cols=68 Identities=15% Similarity=0.176 Sum_probs=40.3
Q ss_pred CCeeEEEEc-CCCCchhHHHHHHHHHhCCCcEEEE---cchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHH
Q psy17541 549 GTKFRVIIV-DGSPWYEGKEMLRRLVKHQVDCSYV---LLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR 624 (717)
Q Consensus 549 Gk~FrVIVv-ESRP~~EGr~lA~~L~~~GI~vTyI---~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK 624 (717)
...++++++ ...| +-+..++++....-++.++ ...-+..+|..+|.+++.+ |+. .+=|-
T Consensus 228 ~~~~~lv~~~g~~~--~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v~~S-------------~g~--~lEA~ 290 (376)
T 1v4v_A 228 FPHLTFVYPVHLNP--VVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-------------GGL--QEEGA 290 (376)
T ss_dssp CTTSEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-------------HHH--HHHHH
T ss_pred CCCeEEEEECCCCH--HHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEEECC-------------cCH--HHHHH
Confidence 445677764 3222 1123344443221256666 4346788899999887542 333 55678
Q ss_pred hCCCcEEec
Q psy17541 625 AFNVPVLAA 633 (717)
Q Consensus 625 ~~~VPVyV~ 633 (717)
.+|+||++.
T Consensus 291 a~G~PvI~~ 299 (376)
T 1v4v_A 291 ALGVPVVVL 299 (376)
T ss_dssp HTTCCEEEC
T ss_pred HcCCCEEec
Confidence 899999985
No 202
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=46.17 E-value=48 Score=31.48 Aligned_cols=80 Identities=13% Similarity=0.187 Sum_probs=48.8
Q ss_pred eEEEecCchHHHHHHHHHHHc-CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch-----------HHHHHh----
Q psy17541 528 VILTYGCSSLVEKILLTAHEK-GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-----------AVSYIM---- 591 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~-Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-----------AVsyiM---- 591 (717)
+|.||.....+...|.....+ ...++|||+|.....+-...++.+.. ..++.++... ..+..+
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi 84 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN-DNRVRFYQSDISGVKERTEKTRYAALINQAI 84 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG-STTEEEEECCCCSHHHHHSSCHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh-cCCEEEEecccccccccccccCHHHHHHHHH
Confidence 466777777778888777654 35688888886655544555555544 5566666532 333333
Q ss_pred h--hcc-EEEEceeeEecCC
Q psy17541 592 R--EVS-KVIIGAHALLSNG 608 (717)
Q Consensus 592 ~--~Vd-kVLLGAdaVlaNG 608 (717)
. +.+ .+|+.+|.++..+
T Consensus 85 ~~a~g~~i~~lD~Dd~~~~~ 104 (255)
T 1qg8_A 85 EMAEGEYITYATDDNIYMPD 104 (255)
T ss_dssp HHCCCSEEEEEETTEEECTT
T ss_pred HHcCCCEEEEeCCCCccChH
Confidence 2 233 4577777777654
No 203
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=45.70 E-value=17 Score=39.66 Aligned_cols=51 Identities=18% Similarity=0.254 Sum_probs=35.0
Q ss_pred HHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccCCc
Q psy17541 586 AVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHK 638 (717)
Q Consensus 586 AVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyK 638 (717)
.+--.++++|.||.|=-++-. -...----.-||-.|+.|+|||+++|.+..
T Consensus 280 ~l~~~l~~ADLVITGEG~~D~--Qtl~GK~p~gVa~~A~~~~vPviaiaG~~~ 330 (383)
T 3cwc_A 280 HLEACLADADLVITGEGRIDS--QTIHGKVPIGVANIAKRYNKPVIGIAGSLT 330 (383)
T ss_dssp THHHHHHHCSEEEECCEESCC------CHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred ChHhhhcCCCEEEECCCCCcC--cCCCCcHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 355667799999999755422 222222235678899999999999998764
No 204
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=45.56 E-value=1.4e+02 Score=30.94 Aligned_cols=112 Identities=11% Similarity=-0.006 Sum_probs=65.7
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEE-EcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEc------
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVI-IVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIG------ 600 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVI-VvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLG------ 600 (717)
.|..+|.+..-...+.........++|+ |+|..|.. ...++. +.||.+....|-.-..--.++|.|++.
T Consensus 25 rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~-~~~~a~---~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 100 (357)
T 3ec7_A 25 KAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGR-AQAALD---KYAIEAKDYNDYHDLINDKDVEVVIITASNEAH 100 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTH-HHHHHH---HHTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred eEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHH-HHHHHH---HhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHH
Confidence 6888999876555444443244567766 66766542 122333 246655555543322222368888874
Q ss_pred -----------eeeEecCCCeecccchHHHHHHHHhCCCcEEecccCCcccccc
Q psy17541 601 -----------AHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 601 -----------AdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyKFs~rv 643 (717)
-+.+++-=-..+--....+.-+|+..|++++.++..+.|.+.+
T Consensus 101 ~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~ 154 (357)
T 3ec7_A 101 ADVAVAALNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGY 154 (357)
T ss_dssp HHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHH
T ss_pred HHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHH
Confidence 3444444334455556667777888888886666667777654
No 205
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=45.55 E-value=38 Score=33.63 Aligned_cols=70 Identities=11% Similarity=0.107 Sum_probs=43.0
Q ss_pred eEEEecCchHHHHHHHHHHHcCC-eeEEE-EcCCCCchhHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh--h
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGT-KFRVI-IVDGSPWYEGKEMLRRLVKHQVDCSYVLL----------SAVSYIMR--E 593 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk-~FrVI-VvESRP~~EGr~lA~~L~~~GI~vTyI~D----------SAVsyiM~--~ 593 (717)
.||.-|.++....+|. +...|. .++|. |+-.+|...|...| .++|||+.++.. ..+...+. +
T Consensus 11 ~vl~SG~gsnl~all~-~~~~~~l~~~I~~Visn~~~a~~l~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~ 86 (209)
T 4ds3_A 11 VIFISGGGSNMEALIR-AAQAPGFPAEIVAVFSDKAEAGGLAKA---EAAGIATQVFKRKDFASKEAHEDAILAALDVLK 86 (209)
T ss_dssp EEEESSCCHHHHHHHH-HHTSTTCSEEEEEEEESCTTCTHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHHHC
T ss_pred EEEEECCcHHHHHHHH-HHHcCCCCcEEEEEEECCcccHHHHHH---HHcCCCEEEeCccccCCHHHHHHHHHHHHHhcC
Confidence 5677778787555554 444543 45554 33347877775443 457999998752 34445554 4
Q ss_pred ccEEEEce
Q psy17541 594 VSKVIIGA 601 (717)
Q Consensus 594 VdkVLLGA 601 (717)
+|.+++-+
T Consensus 87 ~Dliv~ag 94 (209)
T 4ds3_A 87 PDIICLAG 94 (209)
T ss_dssp CSEEEESS
T ss_pred CCEEEEec
Confidence 78877655
No 206
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=45.35 E-value=33 Score=35.12 Aligned_cols=90 Identities=12% Similarity=0.083 Sum_probs=57.1
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHH-----hhhccEEEEc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYI-----MREVSKVIIG 600 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyi-----M~~VdkVLLG 600 (717)
.+.|+..|++..-..+...+.+.| . |+++|..|.. +. |.+.|+++.+. |..=... +.++|.|++-
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g--~-v~vid~~~~~-----~~-~~~~~~~~i~g-d~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSE--V-FVLAEDENVR-----KK-VLRSGANFVHG-DPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSC--E-EEEESCGGGH-----HH-HHHTTCEEEES-CTTSHHHHHHTCSTTEEEEEEC
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC--c-EEEEeCChhh-----hh-HHhCCcEEEEe-CCCCHHHHHhcChhhccEEEEc
Confidence 467999999988777766665555 4 8888877642 34 66678876543 3332222 4466777654
Q ss_pred eeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
.+ +..-+..+++.|++++.+..+++
T Consensus 185 ~~---------~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 185 LE---------SDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp CS---------SHHHHHHHHHHHHTTCTTSEEEE
T ss_pred CC---------ccHHHHHHHHHHHHHCCCCeEEE
Confidence 32 23556788999999987544443
No 207
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=45.24 E-value=1.2e+02 Score=30.92 Aligned_cols=101 Identities=6% Similarity=-0.055 Sum_probs=49.2
Q ss_pred CCCeEE--EecCchHHHHHHHHHH---HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch----------HHHH
Q psy17541 525 NDDVIL--TYGCSSLVEKILLTAH---EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS----------AVSY 589 (717)
Q Consensus 525 dGdvIL--Tyg~SStV~~vL~~A~---e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS----------AVsy 589 (717)
...+++ |.|-+..+..++.... ..|. +|+|.+ |.+.+.. ..+...|..+.+++.. .+-.
T Consensus 94 ~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd--~Vlv~~--p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 167 (401)
T 7aat_A 94 SGRYVTVQGISGTGSLRVGANFLQRFFKFSR--DVYLPK--PSWGNHT--PIFRDAGLQLQAYRYYDPKTCSLDFTGAME 167 (401)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTCC--EEEEEE--SCCTTHH--HHHHHTTCEEEEEECEETTTTEECHHHHHH
T ss_pred cCceEEEecCcchHHHHHHHHHHHHhccCCC--EEEEcC--CCchhHH--HHHHHcCCeeEeeeeeccccCccCHHHHHH
Confidence 456655 7777766554443332 2343 455543 6666543 2344568887777621 1111
Q ss_pred Hhhh----ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 590 IMRE----VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 590 iM~~----VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.+.+ ...|++. ..=-..|.+++.-=-..|+-+|+.|++.+++
T Consensus 168 ~l~~~~~~~~~v~i~-~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 213 (401)
T 7aat_A 168 DISKIPEKSIILLHA-CAHNPTGVDPRQEQWKELASVVKKRNLLAYF 213 (401)
T ss_dssp HHTTSCTTCEEEEES-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhCCCCcEEEEeC-CCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 2221 2222221 1111223333333335677788889987665
No 208
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=45.20 E-value=34 Score=35.36 Aligned_cols=89 Identities=17% Similarity=0.147 Sum_probs=63.2
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceee
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAda 603 (717)
..|+.|..+||-..+...+. +.++|+|+|-.|. + |. +++.+.-++++++|.||+=+.+
T Consensus 139 ~~g~kV~vIG~~P~i~~~l~------~~~~v~V~d~~p~-~-----------g~----~p~~~~e~ll~~aD~viiTGsT 196 (270)
T 2h1q_A 139 VKGKKVGVVGHFPHLESLLE------PICDLSILEWSPE-E-----------GD----YPLPASEFILPECDYVYITCAS 196 (270)
T ss_dssp TTTSEEEEESCCTTHHHHHT------TTSEEEEEESSCC-T-----------TC----EEGGGHHHHGGGCSEEEEETHH
T ss_pred cCCCEEEEECCCHHHHHHHh------CCCCEEEEECCCC-C-----------CC----CChHHHHHHhhcCCEEEEEeee
Confidence 36789999999877665442 2468999999887 2 32 4888999999999999987766
Q ss_pred EecCCCeecccchHHHHHHHHhCCCcEEecccCCccccc
Q psy17541 604 LLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKFCER 642 (717)
Q Consensus 604 VlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyKFs~r 642 (717)
|. ||++- ..+.++ + ...+++++.+|--+.+.
T Consensus 197 lv-N~Ti~-----~lL~~~-~-~a~~vvl~GPS~p~~P~ 227 (270)
T 2h1q_A 197 VV-DKTLP-----RLLELS-R-NARRITLVGPGTPLAPV 227 (270)
T ss_dssp HH-HTCHH-----HHHHHT-T-TSSEEEEESTTCCCCGG
T ss_pred ee-cCCHH-----HHHHhC-c-cCCeEEEEecChhhhHH
Confidence 54 44322 222222 2 45699999999877774
No 209
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=45.16 E-value=89 Score=31.47 Aligned_cols=110 Identities=14% Similarity=0.033 Sum_probs=61.5
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHH---HHHHHHH---hCCCcEEEEc--c-hHHHHHhhhc
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGK---EMLRRLV---KHQVDCSYVL--L-SAVSYIMREV 594 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr---~lA~~L~---~~GI~vTyI~--D-SAVsyiM~~V 594 (717)
.+.+||+.|.+..|-..|.. +.+.| .+|++++-++..... .+...+. ..++.+...- | .++..++.++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLD--QKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 45789999988777655544 44455 567777654432111 1111111 2344332221 1 3466677778
Q ss_pred cEEEEceeeEecC---CC-----eecccchHHHHHHHHhCCCcEEecccC
Q psy17541 595 SKVIIGAHALLSN---GA-----VMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 595 dkVLLGAdaVlaN---G~-----VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
|.||--|-..... .. -+|-.||..++-+|+..+++-+|...+
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 153 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAAS 153 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 8777655322100 00 146789999999999999875654443
No 210
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=45.12 E-value=1.6e+02 Score=29.62 Aligned_cols=100 Identities=14% Similarity=0.067 Sum_probs=51.4
Q ss_pred CeEEEecCchHHHHHHH--HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc----h------HHHHHhh--
Q psy17541 527 DVILTYGCSSLVEKILL--TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL----S------AVSYIMR-- 592 (717)
Q Consensus 527 dvILTyg~SStV~~vL~--~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D----S------AVsyiM~-- 592 (717)
.+++|.|.+..+..++. .....|. +|++. .|.+.+. ...+...|+.+..+.. + ++-..+.
T Consensus 97 ~i~~t~g~~~a~~~~~~~~~~~~~gd--~vl~~--~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 170 (397)
T 3fsl_A 97 ATIQTLGGSGALKVGADFLKRYFPES--GVWVS--DPTWENH--VAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTL 170 (397)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHCTTC--CEEEE--SSCCHHH--HHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTC
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCC--eEEEe--CCCchhH--HHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhC
Confidence 56777777777666543 2233343 34443 3666654 2334457888777753 1 2333333
Q ss_pred -hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 -EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.-.++++=..---..|.+++.---..++-+|+.|++.|++
T Consensus 171 ~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 211 (397)
T 3fsl_A 171 QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFL 211 (397)
T ss_dssp CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEE
Confidence 1123332221122234444333333677788888887776
No 211
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=45.07 E-value=58 Score=34.67 Aligned_cols=73 Identities=14% Similarity=0.148 Sum_probs=42.0
Q ss_pred EEEEcCCCCchhHHH-HH-HHHHhCCCcEEEEcch---HHHHHhh-hccEEEEceeeEe-cCCCeecccchHHHHHHHHh
Q psy17541 553 RVIIVDGSPWYEGKE-ML-RRLVKHQVDCSYVLLS---AVSYIMR-EVSKVIIGAHALL-SNGAVMSRAGTAQVSLVARA 625 (717)
Q Consensus 553 rVIVvESRP~~EGr~-lA-~~L~~~GI~vTyI~DS---AVsyiM~-~VdkVLLGAdaVl-aNG~VvNKiGT~~VALaAK~ 625 (717)
+|++.+ |.+.|.. +. ..|...|++++++... ++-..+. +...|++ +.+. ..|.+. .+ ..|+-+|++
T Consensus 123 ~Vi~~~--~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~--e~~~NptG~v~-dl--~~I~~la~~ 195 (415)
T 2fq6_A 123 HVLMTN--TAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFL--ESPGSITMEVH-DV--PAIVAAVRS 195 (415)
T ss_dssp EEEEET--TSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEE--ESSCTTTCCCC-CH--HHHHHHHHH
T ss_pred EEEEeC--CCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEE--ECCCCCCCEee-cH--HHHHHHHHh
Confidence 566653 6666643 33 3356789999998632 3333333 2333433 2222 224443 22 568888999
Q ss_pred --CCCcEEe
Q psy17541 626 --FNVPVLA 632 (717)
Q Consensus 626 --~~VPVyV 632 (717)
+|++|+|
T Consensus 196 ~~~g~~liv 204 (415)
T 2fq6_A 196 VVPDAIIMI 204 (415)
T ss_dssp HCTTCEEEE
T ss_pred hcCCCEEEE
Confidence 9999887
No 212
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=45.06 E-value=85 Score=31.33 Aligned_cols=53 Identities=11% Similarity=0.121 Sum_probs=34.9
Q ss_pred ccCCCeEEEecCchHHH-HHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 523 LANDDVILTYGCSSLVE-KILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 523 I~dGdvILTyg~SStV~-~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
+..|++||++|.|+.|- .++..|+..|- +|+++++.+.. +.++ .+.|.+..+-
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga--~Vi~~~~~~~~--~~~~---~~~ga~~~~~ 176 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL--RVLAAASRPEK--LALP---LALGAEEAAT 176 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSGGG--SHHH---HHTTCSEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHH---HhcCCCEEEE
Confidence 78899999999865554 34455555564 89999886643 2333 3467765543
No 213
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=44.61 E-value=1.3e+02 Score=30.79 Aligned_cols=111 Identities=7% Similarity=0.047 Sum_probs=61.9
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEE-EcCCCCchhHHHHHHHH-HhCCCcEEEEcchHHHHHhhhccEEEEce----
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVI-IVDGSPWYEGKEMLRRL-VKHQVDCSYVLLSAVSYIMREVSKVIIGA---- 601 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVI-VvESRP~~EGr~lA~~L-~~~GI~vTyI~DSAVsyiM~~VdkVLLGA---- 601 (717)
.|..+|.+..-...+.........++|+ |+|..|. -++.+ .+.||++....|-.-..--.++|.|++..
T Consensus 4 rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~-----~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 78 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQE-----AAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPA 78 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHH-----HHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGG
T ss_pred EEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHH-----HHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchh
Confidence 4677787765444444333244557766 5555432 12222 23576665555433222223588888743
Q ss_pred -------------eeEecCCCeecccchHHHHHHHHhCCCcEEecccCCcccccc
Q psy17541 602 -------------HALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKFCERV 643 (717)
Q Consensus 602 -------------daVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyKFs~rv 643 (717)
|.+++-=-..+.-....+.-+|+..|++++.++..+.|.+.+
T Consensus 79 h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~ 133 (344)
T 3mz0_A 79 HESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGY 133 (344)
T ss_dssp HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHH
T ss_pred HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHH
Confidence 334433333445555667777888888886667777777655
No 214
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=44.52 E-value=65 Score=31.37 Aligned_cols=89 Identities=15% Similarity=0.098 Sum_probs=53.0
Q ss_pred HhhccC-CCeEEEecCchHHHHHHHHHHHcC---CeeEEEEcCC---CCc----hhHHHHHHHHHh-CCCcEEEEcchHH
Q psy17541 520 HNKLAN-DDVILTYGCSSLVEKILLTAHEKG---TKFRVIIVDG---SPW----YEGKEMLRRLVK-HQVDCSYVLLSAV 587 (717)
Q Consensus 520 ~e~I~d-GdvILTyg~SStV~~vL~~A~e~G---k~FrVIVvES---RP~----~EGr~lA~~L~~-~GI~vTyI~DSAV 587 (717)
.+.|.+ |+ +|-++.+++...++......+ .+.+|+-+|- =|. .--..+.+.|.+ .+++..++++...
T Consensus 22 ~~~i~~~~~-~i~ls~G~T~~~~~~~L~~~~~~~~~v~v~~ldEr~gv~~~~~~sn~~~~~~~l~~~~~~~~~~~~~~~~ 100 (234)
T 2ri0_A 22 EEEITFGAK-TLGLATGSTPLELYKEIRESHLDFSDMVSINLDEYVGLSADDKQSYAYFMKQNLFAAKPFKKSYLPNGLA 100 (234)
T ss_dssp HHHHHTTCC-EEEECCSSTTHHHHHHHHTSCCCCTTCEEEESEEETTCCTTSTTSHHHHHHHHTTTTSCCSEEECCCTTC
T ss_pred HHHHHhCCC-EEEEcCCCCHHHHHHHHHhcCCChhheEEEeCeeecCCCCCChHHHHHHHHHHHhccCCCcHhhcCCCCC
Confidence 334443 46 777888888777777665422 4567777662 332 222455666655 4888888765421
Q ss_pred ----------HHHhh--hccEEEEceeeEecCCCeec
Q psy17541 588 ----------SYIMR--EVSKVIIGAHALLSNGAVMS 612 (717)
Q Consensus 588 ----------syiM~--~VdkVLLGAdaVlaNG~VvN 612 (717)
...+. .+|.+|||-= .||.+..
T Consensus 101 ~~~~~~~~~y~~~i~~~~~Dl~llGiG---~dgh~a~ 134 (234)
T 2ri0_A 101 ADLAKETEYYDQILAQYPIDLQILGIG---RNAHIGF 134 (234)
T ss_dssp SCHHHHHHHHHHHHHHSCCSEEEECCC---TTSCBTT
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEccC---CCCCchh
Confidence 11222 5899999953 6776543
No 215
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=44.46 E-value=1.1e+02 Score=30.96 Aligned_cols=103 Identities=15% Similarity=0.154 Sum_probs=58.2
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch---------HHHHHhh-h
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS---------AVSYIMR-E 593 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS---------AVsyiM~-~ 593 (717)
....+++|.|.+..+..++..+...|+ -+|++. .|.+.|.. ..+...|+.+..++.. .+-..+. +
T Consensus 98 ~~~~i~~~~g~~~al~~~~~~l~~~g~-d~vl~~--~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~ 172 (398)
T 3ele_A 98 NADNLYMTMGAAASLSICFRALTSDAY-DEFITI--APYFPEYK--VFVNAAGARLVEVPADTEHFQIDFDALEERINAH 172 (398)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCSTT-CEEEEE--SSCCTHHH--HHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTT
T ss_pred ChHHEEEccCHHHHHHHHHHHHcCCCC-CEEEEe--CCCchhhH--HHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcC
Confidence 344678888877777766666644441 245553 35565532 3344579998888643 2222222 3
Q ss_pred ccEEEEceeeEecCCCeecccchHHHHHHHHh------CCCcEEe
Q psy17541 594 VSKVIIGAHALLSNGAVMSRAGTAQVSLVARA------FNVPVLA 632 (717)
Q Consensus 594 VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~------~~VPVyV 632 (717)
+..|++- .---..|.++..---..++-+|+. |++.+++
T Consensus 173 ~~~v~~~-~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 216 (398)
T 3ele_A 173 TRGVIIN-SPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIA 216 (398)
T ss_dssp EEEEEEC-SSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CCEEEEc-CCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEE
Confidence 4555542 222334555554444556667777 8888776
No 216
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=44.31 E-value=1.9e+02 Score=26.62 Aligned_cols=34 Identities=6% Similarity=-0.032 Sum_probs=27.0
Q ss_pred HHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEE
Q psy17541 566 KEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVII 599 (717)
Q Consensus 566 r~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLL 599 (717)
...++.+.+.|+++..|+++.-+.+.+.+|.+|.
T Consensus 133 ~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l~ 166 (198)
T 2xbl_A 133 LAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLE 166 (198)
T ss_dssp HHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEEE
T ss_pred HHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEEE
Confidence 4677788889999999998776777777888774
No 217
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=44.23 E-value=31 Score=35.24 Aligned_cols=98 Identities=15% Similarity=0.094 Sum_probs=59.1
Q ss_pred CCeEEEecCc------hHHHHHHHHHHHcCCeeEEEEcCCCCchhH----HHHHHHHHhCCCcE--------EE----Ec
Q psy17541 526 DDVILTYGCS------SLVEKILLTAHEKGTKFRVIIVDGSPWYEG----KEMLRRLVKHQVDC--------SY----VL 583 (717)
Q Consensus 526 GdvILTyg~S------StV~~vL~~A~e~Gk~FrVIVvESRP~~EG----r~lA~~L~~~GI~v--------Ty----I~ 583 (717)
..+|+..|+- ..+..++....+.+..++++++-..|...+ ..+.+.+.+.|++- .+ +.
T Consensus 184 ~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~ 263 (413)
T 3oy2_A 184 DVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLT 263 (413)
T ss_dssp SEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCC
T ss_pred ceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCC
Confidence 3467777763 133444444445566677776654444322 23344445568772 22 34
Q ss_pred chHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 584 LSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 584 DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
+..+..+|..+|.+++-.. .+ |--.+.+=|-.+|+||++.
T Consensus 264 ~~~~~~~~~~adv~v~pS~--~E--------~~~~~~lEAma~G~PvI~s 303 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSS--GE--------GFGLCSAEGAVLGKPLIIS 303 (413)
T ss_dssp HHHHHHHHHHCSEEEECCS--CC--------SSCHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHhCCEEEeCCC--cC--------CCCcHHHHHHHcCCCEEEc
Confidence 5579999999999988442 11 2234567788899999983
No 218
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=44.16 E-value=58 Score=34.26 Aligned_cols=100 Identities=18% Similarity=0.290 Sum_probs=55.2
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------------------
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-------------------- 585 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-------------------- 585 (717)
..+++|-|-+..+..++..+...|. +|++.+ |.+.|... .+...|..+.++...
T Consensus 119 ~~v~~t~G~~~al~~~~~~l~~~gd--~Vlv~~--p~y~~~~~--~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~ 192 (447)
T 3b46_A 119 ENVTVTTGANEGILSCLMGLLNAGD--EVIVFE--PFFDQYIP--NIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFE 192 (447)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTC--EEEEEE--SCCTTHHH--HHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHH
T ss_pred hhEEEeCCHHHHHHHHHHHHcCCCC--EEEEeC--CCchhHHH--HHHHcCCEEEEEeCCCccccccccccccCcccCHH
Confidence 3578888877777777666644443 566655 77776432 334568777766521
Q ss_pred HHHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 586 AVSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 586 AVsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.+-..+. ++..|+|- .---..|.++.+-=-..|+-+|+.|++.|++
T Consensus 193 ~l~~~l~~~~~~v~l~-~p~nptG~~~~~~~l~~i~~l~~~~~~~li~ 239 (447)
T 3b46_A 193 QFEKAITSKTKAVIIN-TPHNPIGKVFTREELTTLGNICVKHNVVIIS 239 (447)
T ss_dssp HHHTTCCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhccCCeEEEEe-CCCCCCCcccCHHHHHHHHHHHHHcCcEEEE
Confidence 1211221 33344432 1111235554433334567788999998776
No 219
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=44.13 E-value=89 Score=31.55 Aligned_cols=100 Identities=15% Similarity=0.309 Sum_probs=54.2
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------HHHHHhh----h
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS--------AVSYIMR----E 593 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS--------AVsyiM~----~ 593 (717)
.++++|.|.+..+..++..+...|. +|++.+ |.+.|.. ..+...|+.+..+... .+..+-. +
T Consensus 79 ~~v~~~~g~~~a~~~~~~~~~~~gd--~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~ 152 (381)
T 1v2d_A 79 ESVVVTSGATEALYVLLQSLVGPGD--EVVVLE--PFFDVYL--PDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPR 152 (381)
T ss_dssp GGEEEESSHHHHHHHHHHHHCCTTC--EEEEEE--SCCTTHH--HHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTT
T ss_pred hhEEEcCChHHHHHHHHHHhCCCCC--EEEEcC--CCchhHH--HHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcC
Confidence 3578888877777776666643343 455543 4555543 2345578888777532 1222222 3
Q ss_pred ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 594 VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 594 VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+..|++- ..-...|.++..-=-..++-+|+.|++.|++
T Consensus 153 ~~~v~~~-~~~nptG~~~~~~~l~~i~~~~~~~~~~li~ 190 (381)
T 1v2d_A 153 TRALLLN-TPMNPTGLVFGERELEAIARLARAHDLFLIS 190 (381)
T ss_dssp EEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEC-CCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 3344432 2111234443321124567788899998876
No 220
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=43.97 E-value=70 Score=31.06 Aligned_cols=35 Identities=9% Similarity=-0.047 Sum_probs=30.1
Q ss_pred HHHHHHHHh--CCCcEEEEcchHHHHHhhhccEEEEc
Q psy17541 566 KEMLRRLVK--HQVDCSYVLLSAVSYIMREVSKVIIG 600 (717)
Q Consensus 566 r~lA~~L~~--~GI~vTyI~DSAVsyiM~~VdkVLLG 600 (717)
..+++.+.+ .|+++..|+++.-+.+.+.+|.+|.-
T Consensus 123 i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~~ 159 (220)
T 3etn_A 123 VELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLST 159 (220)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEEC
T ss_pred HHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEEc
Confidence 567888889 99999999998888888889998874
No 221
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=43.93 E-value=1.3e+02 Score=30.42 Aligned_cols=96 Identities=7% Similarity=-0.034 Sum_probs=54.2
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc---hHHHHHhhh-----ccEEE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL---SAVSYIMRE-----VSKVI 598 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D---SAVsyiM~~-----VdkVL 598 (717)
++++|-|-+..+..++..+...|. .|++. .|.+.+... .+...|..+..+.. ..+-..+.. +..|+
T Consensus 105 ~v~~~~ggt~a~~~~~~~~~~~gd--~V~~~--~p~~~~~~~--~~~~~g~~~~~v~~~d~~~l~~~l~~~~~~~~~~v~ 178 (398)
T 3a2b_A 105 AAILFSTGFQSNLGPLSCLMGRND--YILLD--ERDHASIID--GSRLSFSKVIKYGHNNMEDLRAKLSRLPEDSAKLIC 178 (398)
T ss_dssp EEEEESSHHHHHHHHHHHSSCTTC--EEEEE--TTCCHHHHH--HHHHSSSEEEEECTTCHHHHHHHHHTSCSSSCEEEE
T ss_pred cEEEECCHHHHHHHHHHHHhCCCC--EEEEC--CccCHHHHH--HHHHcCCceEEeCCCCHHHHHHHHHhhccCCceEEE
Confidence 577777777666665555533332 44443 356655433 34457888888763 234444443 33444
Q ss_pred EceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 599 IGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 599 LGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+.. .-...|.++. -..|+-+|++|+++|++
T Consensus 179 ~~~-~~nptG~~~~---~~~l~~~~~~~~~~li~ 208 (398)
T 3a2b_A 179 TDG-IFSMEGDIVN---LPELTSIANEFDAAVMV 208 (398)
T ss_dssp EES-BCTTTCCBCC---HHHHHHHHHHHTCEEEE
T ss_pred EeC-CCCCCCCccC---HHHHHHHHHHcCcEEEE
Confidence 322 1222355544 36777888999987776
No 222
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=43.91 E-value=2.1e+02 Score=29.93 Aligned_cols=97 Identities=9% Similarity=-0.050 Sum_probs=56.9
Q ss_pred eEEEecCchHHHHHHHHHHH--------cC---CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch---------HH
Q psy17541 528 VILTYGCSSLVEKILLTAHE--------KG---TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS---------AV 587 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e--------~G---k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS---------AV 587 (717)
.++|-|-+..+..+|..+.. .| .+-+|++.+ .+ ....+.+.-.|+.+.+|... ++
T Consensus 106 ~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~---~h--~~~~~~~~~~G~~v~~v~~~~~~~~~d~~~l 180 (452)
T 2dgk_A 106 GTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP---VQ--ICWHKFARYWDVELREIPMRPGQLFMDPKRM 180 (452)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS---CC--HHHHHHHHHTTCEEEECCCBTTBCSCCHHHH
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC---Cc--HHHHHHHHHcCceEEEEecCCCCCeECHHHH
Confidence 67888877776666555432 45 234777765 22 22334445579998888632 23
Q ss_pred HHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhC------CCcEEe
Q psy17541 588 SYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAF------NVPVLA 632 (717)
Q Consensus 588 syiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~------~VPVyV 632 (717)
-..+.+-+++|+....-...|.+.. -..|+-+|+.+ +++|+|
T Consensus 181 ~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~v 228 (452)
T 2dgk_A 181 IEACDENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGIDIDMHI 228 (452)
T ss_dssp HHHCCTTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCCCCCEEE
T ss_pred HHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCCCCcEEE
Confidence 3333333466666555555665532 24567777774 899887
No 223
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=43.83 E-value=38 Score=34.72 Aligned_cols=53 Identities=15% Similarity=0.115 Sum_probs=36.5
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
.+..|++||++|.+.+=..++..|+..|- +||+++..+... .+ +.+.|.+..+
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~--~~---~~~lGa~~v~ 225 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA--EVSVFARNEHKK--QD---ALSMGVKHFY 225 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC--EEEEECSSSTTH--HH---HHHTTCSEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC--eEEEEeCCHHHH--HH---HHhcCCCeec
Confidence 57889999999986544445556665564 799998777532 33 4457877666
No 224
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=43.64 E-value=64 Score=32.89 Aligned_cols=102 Identities=12% Similarity=0.150 Sum_probs=54.6
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-------hHHHHHhh--hcc
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-------SAVSYIMR--EVS 595 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-------SAVsyiM~--~Vd 595 (717)
...+++|.|.+..+..++..+...|. +|++. .|.+.|... .+...|+++..++. .++-..+. ++.
T Consensus 91 ~~~v~~~~g~~~al~~~~~~~~~~gd--~Vl~~--~p~y~~~~~--~~~~~g~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 164 (397)
T 2zyj_A 91 PEEVLITTGSQQALDLVGKVFLDEGS--PVLLE--APSYMGAIQ--AFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPR 164 (397)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTC--EEEEE--ESCCHHHHH--HHHTTCCEEEEEEEETTEECHHHHHHHHHHCCCS
T ss_pred hhhEEEeccHHHHHHHHHHHhCCCCC--EEEEe--CCCcHHHHH--HHHHcCCEEEecCcCCCCCCHHHHHHHHhhcCCe
Confidence 34678888777776666665533343 45553 366666432 23457888777652 23333343 344
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.|++=...-...|.++..-=-..++-+|+.|++.+++
T Consensus 165 ~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~ 201 (397)
T 2zyj_A 165 FLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVE 201 (397)
T ss_dssp CEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 4433111112234444322122577788899998876
No 225
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=43.53 E-value=55 Score=32.83 Aligned_cols=91 Identities=12% Similarity=0.126 Sum_probs=51.0
Q ss_pred CCeEEEecCchHHHHHHHHH-HHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------HHHHHhhhccE
Q psy17541 526 DDVILTYGCSSLVEKILLTA-HEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS--------AVSYIMREVSK 596 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A-~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS--------AVsyiM~~Vdk 596 (717)
.++|+|-|-+..+..+|..+ ...|. +|++. .|.+.+.. ..+...|+.+.++... ++-..+.+=.+
T Consensus 54 ~~~~~~~~gt~a~~~~~~~~~~~~gd--~v~~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 127 (374)
T 3uwc_A 54 PHAIGVGTGTDALAMSFKMLNIGAGD--EVITC--ANTFIASV--GAIVQAGATPVLVDSENGYVIDPEKIEAAITDKTK 127 (374)
T ss_dssp SEEEEESCHHHHHHHHHHHTTCCTTC--EEEEE--SSSCHHHH--HHHHHTTCEEEEECBCTTSSBCGGGTGGGCCTTEE
T ss_pred CcEEEeCCHHHHHHHHHHHcCCCCCC--EEEEC--CCccHHHH--HHHHHcCCEEEEEecCCCCCcCHHHHHHhCCCCce
Confidence 36777776666655555544 33333 45553 45565543 3355689998888743 12222222123
Q ss_pred EEEceeeEecCCCeecccch----HHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGT----AQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT----~~VALaAK~~~VPVyV 632 (717)
+|+ +.|..|+ ..|+-+|+.|+++|++
T Consensus 128 ~v~----------~~n~~G~~~~~~~i~~~~~~~~~~li~ 157 (374)
T 3uwc_A 128 AIM----------PVHYTGNIADMPALAKIAKKHNLHIVE 157 (374)
T ss_dssp EEC----------CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred EEE----------EeCCcCCcCCHHHHHHHHHHcCCEEEE
Confidence 333 2333443 5677889999998887
No 226
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=43.42 E-value=68 Score=33.45 Aligned_cols=102 Identities=22% Similarity=0.322 Sum_probs=58.1
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch-------HHHHH---hh-
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-------AVSYI---MR- 592 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-------AVsyi---M~- 592 (717)
...++++|.|.+..+..++..+...|. +|+|. .|.+.+.. ..+...|+.+.++... -+..+ +.
T Consensus 117 ~~~~v~~t~g~t~al~~~~~~l~~~gd--~vl~~--~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~ 190 (427)
T 3dyd_A 117 EAKDVILTSGCSQAIDLCLAVLANPGQ--NILVP--RPGFSLYK--TLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDE 190 (427)
T ss_dssp CGGGEEEESSHHHHHHHHHHHHCCTTC--EEEEE--ESCCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHSSCCT
T ss_pred ChHHEEEecCcHHHHHHHHHHhcCCCC--EEEEc--CCCchhHH--HHHHHcCCEEEEEecccccCCCCCHHHHHHHhcc
Confidence 345688888888877666666544343 45554 46676643 3345578887776532 12222 22
Q ss_pred hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+...|++- +.--..|.++..---..|+-+|+.+++++++
T Consensus 191 ~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~ 229 (427)
T 3dyd_A 191 KTACLIVN-NPSNPCGSVFSKRHLQKILAVAARQCVPILA 229 (427)
T ss_dssp TEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEE-CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 22233321 1112335555444456678889999998887
No 227
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=43.40 E-value=54 Score=32.85 Aligned_cols=99 Identities=19% Similarity=0.078 Sum_probs=57.5
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc---chHHHHHhhhccEEEEc
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL---LSAVSYIMREVSKVIIG 600 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~---DSAVsyiM~~VdkVLLG 600 (717)
.+.+||+.|-+..|-..|.. +.+.| ++|++++-++.. .++.+...- ..++..++..+|.||--
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQG--RTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLHL 84 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTT--CCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC--CEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEEC
Confidence 34678888888776555544 34455 567777655432 344433322 13456667778887765
Q ss_pred eeeEecCCC------eecccchHHHHHHHHhCCCcEEecccC
Q psy17541 601 AHALLSNGA------VMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 601 AdaVlaNG~------VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
|-....+.. -+|-.||..+.-+|+..++.-+|...+
T Consensus 85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 532211111 136679999999999999865555444
No 228
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=43.29 E-value=2.5e+02 Score=28.18 Aligned_cols=97 Identities=8% Similarity=0.062 Sum_probs=51.0
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch---HHHHHhhhc---cEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS---AVSYIMREV---SKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS---AVsyiM~~V---dkVLLG 600 (717)
+.|++-+-+..+..+|..+...|. .|++. .|.+.+. ...+...|+++..++.. .+-..+.+. .++++=
T Consensus 101 ~~i~~~sGt~a~~~~~~~~~~~gd--~v~~~--~~~~~~~--~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~ 174 (384)
T 1bs0_A 101 RALLFISGFAANQAVIAAMMAKED--RIAAD--RLSHASL--LEAASLSPSQLRRFAHNDVTHLARLLASPCPGQQMVVT 174 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHCCTTC--EEEEE--TTCCHHH--HHHHHTSSSEEEEECTTCHHHHHHHHHSCCSSCEEEEE
T ss_pred cEEEeCCcHHHHHHHHHHhCCCCc--EEEEc--ccccHHH--HHHHHHcCCCEEEeCCCCHHHHHHHHHhcCCCCeEEEE
Confidence 455554446665555544433333 34443 3555433 33445579988888632 333344332 333332
Q ss_pred eeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
...-...|.++. --.|+-+|++|+++|++
T Consensus 175 ~~~~nptG~~~~---l~~i~~l~~~~~~~li~ 203 (384)
T 1bs0_A 175 EGVFSMDGDSAP---LAEIQQVTQQHNGWLMV 203 (384)
T ss_dssp ESBCTTTCCBCC---HHHHHHHHHHTTCEEEE
T ss_pred eCCCCCCCCccC---HHHHHHHHHHcCcEEEE
Confidence 222233566665 35678889999998776
No 229
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=43.29 E-value=16 Score=31.93 Aligned_cols=57 Identities=23% Similarity=0.191 Sum_probs=34.5
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCC-CchhHHHHHHHHHhCC--CcEEEEcc
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGS-PWYEGKEMLRRLVKHQ--VDCSYVLL 584 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESR-P~~EGr~lA~~L~~~G--I~vTyI~D 584 (717)
..|-.|.+.....-. +... .....|.++++|-. |...|..+++.|.+.+ +++.+++.
T Consensus 25 ~~~~~v~~~~~~~~a---~~~l-~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 84 (151)
T 3kcn_A 25 SFDFEVTTCESGPEA---LACI-KKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTG 84 (151)
T ss_dssp TTTSEEEEESSHHHH---HHHH-HHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEEC
T ss_pred ccCceEEEeCCHHHH---HHHH-HcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEEC
Confidence 345555555444333 3322 22345788888855 7888999999988754 55555543
No 230
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=43.10 E-value=1.1e+02 Score=31.35 Aligned_cols=100 Identities=13% Similarity=0.161 Sum_probs=52.2
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch----------HHHHHhh-hc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS----------AVSYIMR-EV 594 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS----------AVsyiM~-~V 594 (717)
..+++|-|.+..+..++..+...|. +|++. .|.+.|... .+...|+.+..+... ++-..+. ++
T Consensus 102 ~~v~~t~g~~~al~~~~~~l~~~gd--~Vl~~--~~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 175 (406)
T 1xi9_A 102 DDVRVTAAVTEALQLIFGALLDPGD--EILVP--GPSYPPYTG--LVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRT 175 (406)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTC--EEEEE--ESCCHHHHH--HHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTE
T ss_pred HHEEEcCChHHHHHHHHHHhCCCCC--EEEEc--CCCCccHHH--HHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCc
Confidence 4577777777776666665543342 45553 355655432 234578877766532 1222222 23
Q ss_pred cEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 595 SKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
..|++- ..--..|.++..-=-..|+-+|+.+++.|++
T Consensus 176 ~~v~i~-~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 212 (406)
T 1xi9_A 176 KAIAVI-NPNNPTGALYDKKTLEEILNIAGEYEIPVIS 212 (406)
T ss_dssp EEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred eEEEEE-CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 334331 1111234443322234567788889998876
No 231
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=43.05 E-value=66 Score=30.20 Aligned_cols=106 Identities=14% Similarity=0.083 Sum_probs=63.4
Q ss_pred CCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEc
Q psy17541 525 NDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--L-SAVSYIMREVSKVIIG 600 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--D-SAVsyiM~~VdkVLLG 600 (717)
.+.+||+.|-++.|-..|. .+.+.|..++|+++.-+|.. +..| ..++.+...- | .++..++.++|.||.-
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~-----~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 76 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQG-----KEKI-GGEADVFIGDITDADSINPAFQGIDALVIL 76 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHH-----HHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCc-----hhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 3568888888877655554 44445335678877654321 1222 2345433221 2 4677788889998876
Q ss_pred eeeEecCC---------------------CeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 601 AHALLSNG---------------------AVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 601 AdaVlaNG---------------------~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
|-.....+ .-+|-.|+..+.-+|+.++++-+|...+
T Consensus 77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 133 (253)
T 1xq6_A 77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGS 133 (253)
T ss_dssp CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEE
T ss_pred ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 64321111 0256789999999998888875654443
No 232
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=42.86 E-value=41 Score=34.40 Aligned_cols=107 Identities=15% Similarity=0.203 Sum_probs=55.4
Q ss_pred ccCCCeEEEecCchHHHHHHHHHHHcC---CeeEEEEcCCCCchhHHHHHH----HHHhCCCcEEEEcch---------H
Q psy17541 523 LANDDVILTYGCSSLVEKILLTAHEKG---TKFRVIIVDGSPWYEGKEMLR----RLVKHQVDCSYVLLS---------A 586 (717)
Q Consensus 523 I~dGdvILTyg~SStV~~vL~~A~e~G---k~FrVIVvESRP~~EGr~lA~----~L~~~GI~vTyI~DS---------A 586 (717)
+....+|+|-|.+..+..++..+...| ..-+|++.+ .|.+.|...+. .+...+..+..+... +
T Consensus 96 ~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 174 (417)
T 3g7q_A 96 IEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPL-APEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEH 174 (417)
T ss_dssp CCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESS-CCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGG
T ss_pred CCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeC-CCccccchhhccchhhhccccCcccccCCcccccccCHHH
Confidence 344578888888877666666554332 223677754 36676653221 122344555444322 1
Q ss_pred HHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 587 VSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 587 VsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+- +-+++..|++. ..--..|.++..---..|+-+|+.|+++|++
T Consensus 175 l~-~~~~~~~v~~~-~p~NptG~~~~~~~~~~l~~~a~~~~~~li~ 218 (417)
T 3g7q_A 175 LH-IGEETGMICVS-RPTNPTGNVITDEELMKLDRLANQHNIPLVI 218 (417)
T ss_dssp CC-CCTTEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred hc-cccCceEEEEC-CCCCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 11 11223333332 1112335555444456677789999998886
No 233
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=42.80 E-value=1.7e+02 Score=28.35 Aligned_cols=35 Identities=11% Similarity=-0.115 Sum_probs=29.6
Q ss_pred HHHHHHHHHhCCCcEEEEcchHHH-----------HHhhhccEEEE
Q psy17541 565 GKEMLRRLVKHQVDCSYVLLSAVS-----------YIMREVSKVII 599 (717)
Q Consensus 565 Gr~lA~~L~~~GI~vTyI~DSAVs-----------yiM~~VdkVLL 599 (717)
-..+++.+.+.|+++..|++..-+ .+.+.+|.+|.
T Consensus 124 ~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~ 169 (243)
T 3cvj_A 124 PVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLD 169 (243)
T ss_dssp HHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEE
Confidence 357888889999999999998777 77788999885
No 234
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=42.77 E-value=97 Score=31.91 Aligned_cols=100 Identities=11% Similarity=0.109 Sum_probs=55.4
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch---------HHHHHh-hhcc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS---------AVSYIM-REVS 595 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS---------AVsyiM-~~Vd 595 (717)
..+++|-|.+..+..++..+...|. +|++. .|.+.|...+ +...|+.+..+... .+-..+ .++.
T Consensus 110 ~~v~~t~G~~~al~~~~~~l~~~gd--~Vl~~--~p~y~~~~~~--~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~ 183 (404)
T 2o1b_A 110 DEVCILYGTKNGLVAVPTCVINPGD--YVLLP--DPGYTDYLAG--VLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTK 183 (404)
T ss_dssp TSEEEESSHHHHHHHHHHHHCCTTC--EEEEE--ESCCSSHHHH--HHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEE
T ss_pred ccEEEcCCcHHHHHHHHHHhcCCCC--EEEEc--CCCchhHHHH--HHHCCCEEEEeccCcccCcCCHHHHHHhhccCce
Confidence 4688888877777666665533342 45554 4666664332 34568887777532 111112 3455
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.|+|- .--...|.++..-=-..|+-+|+.+++++++
T Consensus 184 ~v~l~-~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 219 (404)
T 2o1b_A 184 LIYLT-YPNNPTGSTATKEVFDEAIAKFKGTDTKIVH 219 (404)
T ss_dssp EEEEC-SSCTTTCCCCCHHHHHHHHHHHTTSSCEEEE
T ss_pred EEEEc-CCCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 55553 2212234444321123577788999998776
No 235
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=42.64 E-value=2e+02 Score=26.26 Aligned_cols=37 Identities=11% Similarity=-0.008 Sum_probs=31.1
Q ss_pred HHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEce
Q psy17541 565 GKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGA 601 (717)
Q Consensus 565 Gr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGA 601 (717)
-..+++.+.+.|+++..|+++.-+.+.+.+|.+|.-.
T Consensus 112 ~~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~~~ 148 (183)
T 2xhz_A 112 ITALIPVLKRLHVPLICITGRPESSMARAADVHLCVK 148 (183)
T ss_dssp HHHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEECC
T ss_pred HHHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEEeC
Confidence 3577888899999999999988888888899887654
No 236
>3la8_A SMU.1229, putative purine nucleoside phosphorylase; PUNA, glycosyltransferase, transferase; 1.80A {Streptococcus mutans} PDB: 3lba_A*
Probab=42.58 E-value=45 Score=35.12 Aligned_cols=74 Identities=20% Similarity=0.213 Sum_probs=47.3
Q ss_pred EecCchHHHHHHHHHH-HcCCee--EEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecC
Q psy17541 531 TYGCSSLVEKILLTAH-EKGTKF--RVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSN 607 (717)
Q Consensus 531 Tyg~SStV~~vL~~A~-e~Gk~F--rVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaN 607 (717)
++-|+.-....+..+. +.|..+ =||++=+-|.|+-..-.+.|. . +|||+|=-.
T Consensus 189 ~~~yd~~Lr~~a~~aA~~~gi~~~~Gvy~~~~GP~FeT~AE~r~~r-------------------~-----~GadaVgMs 244 (303)
T 3la8_A 189 SNAYTADYREVAHQVADKIGIKLDEGVYIGVSGPSYETPAEIRAFK-------------------T-----LGADAVGMS 244 (303)
T ss_dssp TTSSCHHHHHHHHHHHHHHTCCCEEEEEEECCCSSCCCHHHHHHHH-------------------H-----TTCSEEESS
T ss_pred CcccCHHHHHHHHHHHHHcCCceEEEEEEEeeCCccCCHHHHHHHH-------------------H-----cCCCEEecc
Confidence 3445655556555544 345444 367777788887542222222 1 377777655
Q ss_pred CCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 608 GAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 608 G~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
+ .+.|.+|+++++||.+++--
T Consensus 245 t--------~pEa~vAre~gi~~~~Is~I 265 (303)
T 3la8_A 245 T--------VPEVIVAVHSGLKVLGISAI 265 (303)
T ss_dssp S--------HHHHHHHHHTTCEEEEEEEE
T ss_pred H--------HHHHHHHHHcCCCEEEEEEE
Confidence 4 89999999999999987643
No 237
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=42.56 E-value=1.1e+02 Score=31.24 Aligned_cols=100 Identities=13% Similarity=0.187 Sum_probs=52.7
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH-------HHHH---hh-hc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA-------VSYI---MR-EV 594 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA-------Vsyi---M~-~V 594 (717)
.++++|.|.+..+..++......|. +|+|.+ |.+.+.. ..+...|+.+..+.... +..+ +. +.
T Consensus 92 ~~i~~t~g~~~al~~~~~~l~~~gd--~Vlv~~--p~y~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 165 (385)
T 1b5p_A 92 EETIVTVGGSQALFNLFQAILDPGD--EVIVLS--PYWVSYP--EMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRT 165 (385)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTC--EEEEEE--SCCTHHH--HHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTE
T ss_pred HHEEEcCChHHHHHHHHHHhcCCCC--EEEEcC--CCchhHH--HHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCC
Confidence 4678887777776666655543343 455543 5555532 23345788877776421 1111 21 22
Q ss_pred cEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 595 SKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
..|++- +---..|.+++.-=-..|+-+|+.|++.|++
T Consensus 166 ~~v~~~-~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~ 202 (385)
T 1b5p_A 166 KALVVN-SPNNPTGAVYPKEVLEALARLAVEHDFYLVS 202 (385)
T ss_dssp EEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEEe-CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 233321 2111234444433335677788999987776
No 238
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=42.48 E-value=84 Score=34.76 Aligned_cols=112 Identities=13% Similarity=0.194 Sum_probs=67.8
Q ss_pred ccCCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCc-hhH-HHHHHHHHhCCCcEEEEc-c----hHHHHHhhh-
Q psy17541 523 LANDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPW-YEG-KEMLRRLVKHQVDCSYVL-L----SAVSYIMRE- 593 (717)
Q Consensus 523 I~dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~-~EG-r~lA~~L~~~GI~vTyI~-D----SAVsyiM~~- 593 (717)
+..+.+||+.|-++-+-..|. ...+.|.. +|+++.-++. .++ ..++.+|...|..++++. | .++..++..
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~-~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~ 334 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAE-RLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAY 334 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCS-EEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHS
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCc-EEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcC
Confidence 345678888887776655544 34444532 4555443332 223 467788988998888863 3 456667765
Q ss_pred -ccEEEEceeeEecCCCe-------------ecccchHHHHHHHHhC-CCcEEecccC
Q psy17541 594 -VSKVIIGAHALLSNGAV-------------MSRAGTAQVSLVARAF-NVPVLAACET 636 (717)
Q Consensus 594 -VdkVLLGAdaVlaNG~V-------------vNKiGT~~VALaAK~~-~VPVyV~cEt 636 (717)
+|.||-.|- +..+|.+ .|-.|+..+.-++... +..++|+..+
T Consensus 335 ~ld~VVh~AG-v~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS 391 (511)
T 2z5l_A 335 PPNAVFHTAG-ILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSS 391 (511)
T ss_dssp CCSEEEECCC-CCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEE
T ss_pred CCcEEEECCc-ccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeC
Confidence 888887763 3334432 2456777776666665 6666665544
No 239
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=42.38 E-value=1.2e+02 Score=31.08 Aligned_cols=100 Identities=14% Similarity=0.094 Sum_probs=56.2
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc---------hHHHHHhh-----
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL---------SAVSYIMR----- 592 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D---------SAVsyiM~----- 592 (717)
.+++|.|-+..+..++......|. +|+|.+ |.+.+... .+...|..+..++. ..+-..+.
T Consensus 104 ~i~~t~g~~~al~~~~~~l~~~gd--~Vl~~~--p~~~~~~~--~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~ 177 (418)
T 3rq1_A 104 RSIATAGGTGGIHHLIHNYTEPGD--EVLTAD--WYWGAYRV--ICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAK 177 (418)
T ss_dssp EEEEESHHHHHHHHHHHHHSCTTC--EEEEES--SCCTHHHH--HHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHH
T ss_pred cEEECCchHHHHHHHHHHhcCCCC--EEEECC--CCchhHHH--HHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhcc
Confidence 577777777776666655443343 566654 66666432 34457888888762 12333333
Q ss_pred hcc-EEEEceeeEecCCCeecccchHHHHHHHH------hCCCcEEe
Q psy17541 593 EVS-KVIIGAHALLSNGAVMSRAGTAQVSLVAR------AFNVPVLA 632 (717)
Q Consensus 593 ~Vd-kVLLGAdaVlaNG~VvNKiGT~~VALaAK------~~~VPVyV 632 (717)
+.. .|++-.-.--..|.++..-.-..++-+|+ .|++.|++
T Consensus 178 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 224 (418)
T 3rq1_A 178 QTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGI 224 (418)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEE
Confidence 233 23332111234577777666666777777 77876665
No 240
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=42.22 E-value=99 Score=31.52 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=54.8
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH-------HHHH---hh-h
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA-------VSYI---MR-E 593 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA-------Vsyi---M~-~ 593 (717)
...+++|.|.+..+..++..+...|. +|++.+ |.+.|... .+...|+.+..+.... +..+ +. +
T Consensus 101 ~~~v~~~~g~t~al~~~~~~l~~~gd--~Vl~~~--~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 174 (389)
T 1o4s_A 101 PDQVVVTNGAKQALFNAFMALLDPGD--EVIVFS--PVWVSYIP--QIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGK 174 (389)
T ss_dssp GGGEEEESHHHHHHHHHHHHHCCTTC--EEEEEE--SCCTTHHH--HHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTT
T ss_pred HHHEEEecCHHHHHHHHHHHhCCCCC--EEEEcC--CCchhHHH--HHHHcCCEEEEEecCCccCCCCCHHHHHHhcccC
Confidence 34678887777776666665543343 455543 55555432 2345788888776321 2222 22 3
Q ss_pred ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 594 VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 594 VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+..|++ ...--..|.++..---..|+-+|+.+++.|++
T Consensus 175 ~~~v~~-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 212 (389)
T 1o4s_A 175 TKAVLI-NSPNNPTGVVYRREFLEGLVRLAKKRNFYIIS 212 (389)
T ss_dssp EEEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ceEEEE-cCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 334443 22111235544433334677788899998876
No 241
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=41.83 E-value=1.4e+02 Score=30.03 Aligned_cols=100 Identities=17% Similarity=0.074 Sum_probs=60.2
Q ss_pred ccCCCeEEEecCch-------HHHHHHHHHHHcC--CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE----cchHHHH
Q psy17541 523 LANDDVILTYGCSS-------LVEKILLTAHEKG--TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV----LLSAVSY 589 (717)
Q Consensus 523 I~dGdvILTyg~SS-------tV~~vL~~A~e~G--k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI----~DSAVsy 589 (717)
+.++-+|+..|+=. .+..++....+.+ ..++++++-..|......+.....+.| ++.++ ....+..
T Consensus 248 ~~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~~~~~~~~~ 326 (439)
T 3fro_A 248 MDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRE 326 (439)
T ss_dssp CCSCEEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHH
T ss_pred CCCCcEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCCCCHHHHHH
Confidence 34444566666533 2333344443344 678888887666432233444444566 66654 3466899
Q ss_pred HhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 590 IMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 590 iM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
+|..+|.+|+-... .| .-...+=|-.+|+||++.
T Consensus 327 ~~~~adv~v~ps~~---e~-------~~~~~~EAma~G~Pvi~s 360 (439)
T 3fro_A 327 LYGSVDFVIIPSYF---EP-------FGLVALEAMCLGAIPIAS 360 (439)
T ss_dssp HHTTCSEEEECBSC---CS-------SCHHHHHHHHTTCEEEEE
T ss_pred HHHHCCEEEeCCCC---CC-------ccHHHHHHHHCCCCeEEc
Confidence 99999999876532 22 223456688889999984
No 242
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=41.44 E-value=72 Score=32.26 Aligned_cols=100 Identities=17% Similarity=0.183 Sum_probs=50.0
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch-----HHHHHhh---hccEE
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-----AVSYIMR---EVSKV 597 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-----AVsyiM~---~VdkV 597 (717)
..+++|-|.+..+..++......|+ -+|++. .|.+.|...+ +...|+.+..++.. .+..+.. +...|
T Consensus 76 ~~v~~~~G~~~ai~~~~~~~~~~g~-d~Vl~~--~p~~~~~~~~--~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~v 150 (356)
T 1fg7_A 76 EQVLVSRGADEGIELLIRAFCEPGK-DAILYC--PPTYGMYSVS--AETIGVECRTVPTLDNWQLDLQGISDKLDGVKVV 150 (356)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTT-CEEEEC--SSSCTHHHHH--HHHHTCEEEECCCCTTSCCCHHHHHTSCTTEEEE
T ss_pred HHEEEcCCHHHHHHHHHHHHhCCCC-CEEEEe--CCChHHHHHH--HHHcCCEEEEeeCCCCCCCCHHHHHHHhcCCCEE
Confidence 3578887777776666555433341 256664 4777775433 23358877776531 1222222 23344
Q ss_pred EEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 598 IIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 598 LLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+|. .--...|.++..---..++-.|+ +++.|++
T Consensus 151 ~l~-~p~nptG~~~~~~~l~~l~~~~~-~~~~li~ 183 (356)
T 1fg7_A 151 YVC-SPNNPTGQLINPQDFRTLLELTR-GKAIVVA 183 (356)
T ss_dssp EEE-SSCTTTCCCCCHHHHHHHHHHHT-TTCEEEE
T ss_pred EEe-CCCCCCCCCCCHHHHHHHHHhCC-CCCEEEE
Confidence 442 22122354444322223344455 7886664
No 243
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=41.39 E-value=58 Score=32.88 Aligned_cols=22 Identities=14% Similarity=0.147 Sum_probs=16.6
Q ss_pred HHHHHHHhCCCcEEecccCCcc
Q psy17541 618 QVSLVARAFNVPVLAACETHKF 639 (717)
Q Consensus 618 ~VALaAK~~~VPVyV~cEtyKF 639 (717)
...++|+..+||++.++..+-+
T Consensus 115 ~~~~aA~~~giP~v~~~~~~~~ 136 (402)
T 3ia7_A 115 AGRLLAARWDRPAVRLTGGFAA 136 (402)
T ss_dssp HHHHHHHHHTCCEEEEESSCCC
T ss_pred HHHHHHHhhCCCEEEEeccccc
Confidence 3567889999999988755543
No 244
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=41.35 E-value=1.4e+02 Score=30.77 Aligned_cols=78 Identities=9% Similarity=0.161 Sum_probs=44.8
Q ss_pred CCeEEEecC---chHHHHHHHHHHH-------------------cCCeeEEEEcCCC-CchhHHHHHHHHHh-CCCcEEE
Q psy17541 526 DDVILTYGC---SSLVEKILLTAHE-------------------KGTKFRVIIVDGS-PWYEGKEMLRRLVK-HQVDCSY 581 (717)
Q Consensus 526 GdvILTyg~---SStV~~vL~~A~e-------------------~Gk~FrVIVvESR-P~~EGr~lA~~L~~-~GI~vTy 581 (717)
+.+++.++. |.+++.++..+.. .+..+.|+-+|+. ..-|-..++.++.+ .||++..
T Consensus 54 ~~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~fpet~~fv~~~~~~ygl~l~v 133 (306)
T 2wsi_A 54 GEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTLENFVLETSERYCLSLYE 133 (306)
T ss_dssp SSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHHHHHHHHHHHHTTEEEEE
T ss_pred CCEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 457788855 3455555555521 1456777777754 44445677777764 7998876
Q ss_pred Ecc---------hHHHHHhh---hccEEEEceee
Q psy17541 582 VLL---------SAVSYIMR---EVSKVIIGAHA 603 (717)
Q Consensus 582 I~D---------SAVsyiM~---~VdkVLLGAda 603 (717)
+.- .++..+++ .++.||+|..+
T Consensus 134 ~~~~~~~~~~l~~~~~~~~k~~p~~~aii~G~Rr 167 (306)
T 2wsi_A 134 SQRQSGASVNMADAFRDFIKIYPETEAIVIGIRH 167 (306)
T ss_dssp CCC-----CCHHHHHHHHHHHCTTCCEEECCCCC
T ss_pred EeCCccccccHHHHHHHHHhhCCCCcEEEEEEec
Confidence 642 23333332 35667777543
No 245
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=41.22 E-value=1.1e+02 Score=25.69 Aligned_cols=77 Identities=13% Similarity=0.125 Sum_probs=45.2
Q ss_pred CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHHh
Q psy17541 549 GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--VSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA 625 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--VsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~ 625 (717)
....+|+|+|..+... ..+...|...|+.|....+.. +..+.. ..|.|| +.+. -|-..+..+-..
T Consensus 16 ~~~~~ilivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi------~~~~-----~g~~~~~~l~~~ 83 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLG-GEIEKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM------VSDK-----NALSFVSRIKEK 83 (137)
T ss_dssp TTCSEEEEECSCHHHH-HHHHHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEE------ECST-----THHHHHHHHHHH
T ss_pred CCCCeEEEEeCCHHHH-HHHHHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEE------EcCc-----cHHHHHHHHHhc
Confidence 4566888888776543 345566777888887665432 333322 467777 2221 233334444333
Q ss_pred C-CCcEEecccCC
Q psy17541 626 F-NVPVLAACETH 637 (717)
Q Consensus 626 ~-~VPVyV~cEty 637 (717)
. ++||++++...
T Consensus 84 ~~~~~ii~ls~~~ 96 (137)
T 2pln_A 84 HSSIVVLVSSDNP 96 (137)
T ss_dssp STTSEEEEEESSC
T ss_pred CCCccEEEEeCCC
Confidence 5 89999987754
No 246
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=41.07 E-value=89 Score=32.43 Aligned_cols=75 Identities=12% Similarity=0.154 Sum_probs=47.7
Q ss_pred CCeeEEEEcCCCCchhHHHHHHHHHhCCCcE---------EEEcc--hHHHHHhhhccEEEEceeeEecCCCeecccchH
Q psy17541 549 GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDC---------SYVLL--SAVSYIMREVSKVIIGAHALLSNGAVMSRAGTA 617 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~v---------TyI~D--SAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~ 617 (717)
...++++++-..|.. ...+.+.+.+.|+.. .++.+ .-+..+|..+|.+|+|..-. ..|+
T Consensus 223 ~p~~~lvivG~g~~~-~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~~aDv~vl~ss~~-e~gg-------- 292 (374)
T 2xci_A 223 YSSLKLILVPRHIEN-AKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYPVGKIAIVGGTFV-NIGG-------- 292 (374)
T ss_dssp CTTCEEEEEESSGGG-HHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGGGEEEEEECSSSS-SSCC--------
T ss_pred CCCcEEEEECCCHHH-HHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHHhCCEEEECCccc-CCCC--------
Confidence 446777766444432 124555566778863 35555 67899999999988875321 2232
Q ss_pred HHHHHHHhCCCcEEec
Q psy17541 618 QVSLVARAFNVPVLAA 633 (717)
Q Consensus 618 ~VALaAK~~~VPVyV~ 633 (717)
...+=|-+.|+||++-
T Consensus 293 ~~~lEAmA~G~PVI~~ 308 (374)
T 2xci_A 293 HNLLEPTCWGIPVIYG 308 (374)
T ss_dssp CCCHHHHTTTCCEEEC
T ss_pred cCHHHHHHhCCCEEEC
Confidence 1246677899999963
No 247
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=41.03 E-value=49 Score=32.74 Aligned_cols=98 Identities=13% Similarity=0.034 Sum_probs=56.7
Q ss_pred CeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--chHHHHHhhhccEEEEceee
Q psy17541 527 DVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--LSAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--DSAVsyiM~~VdkVLLGAda 603 (717)
.+||+.|-+..|-..|.. +.+.| ++|+++.-++... . |. ++.+...- ..++..++.++|.||--|-.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~----~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDG--NTPIILTRSIGNK--A----IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCC-------------CCEEEECCCCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC--CEEEEEeCCCCcc--c----CC--ceEEEEccccHHHHHHhhcCCCEEEEcccc
Confidence 478888887776555544 44445 4677665443321 1 22 55443322 24455667777877765533
Q ss_pred EecC----CCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 604 LLSN----GAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 604 VlaN----G~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
...+ -.-.|-.||..+.-+|+..+++-+|..
T Consensus 73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~ 107 (311)
T 3m2p_A 73 RGSQGKISEFHDNEILTQNLYDACYENNISNIVYA 107 (311)
T ss_dssp CCSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 2111 112567899999999999999844433
No 248
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=40.91 E-value=87 Score=33.16 Aligned_cols=97 Identities=14% Similarity=0.081 Sum_probs=53.8
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHH-HHHhCCCcEEEEcch---HHHHHhh-hccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLR-RLVKHQVDCSYVLLS---AVSYIMR-EVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~-~L~~~GI~vTyI~DS---AVsyiM~-~VdkVLLG 600 (717)
++|+|-|-+..+..+|..+...|. +|++. .|.+.|. .++. .+...|+.+.++... ++-..+. ++..|++
T Consensus 98 ~~~~~~sG~~Ai~~al~~l~~~Gd--~Vi~~--~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~l- 172 (414)
T 3ndn_A 98 AAFATASGMAAVFTSLGALLGAGD--RLVAA--RSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFF- 172 (414)
T ss_dssp EEEEESSHHHHHHHHHHTTCCTTC--EEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEE-
T ss_pred cEEEECCHHHHHHHHHHHHhCCCC--EEEEc--CCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEE-
Confidence 355555445555544544433343 45553 4566663 3332 356689999999743 3333343 4555555
Q ss_pred eeeEe-cCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALL-SNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVl-aNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+.+. ..|.+.. --.|+-+|+.+|++|+|
T Consensus 173 -e~p~NptG~~~~---l~~i~~la~~~g~~liv 201 (414)
T 3ndn_A 173 -ETPSNPMQSLVD---IAAVTELAHAAGAKVVL 201 (414)
T ss_dssp -ESSCTTTCCCCC---HHHHHHHHHHTTCEEEE
T ss_pred -ECCCCCCCcccc---HHHHHHHHHHcCCEEEE
Confidence 2222 2343322 34688889999998887
No 249
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=40.87 E-value=58 Score=33.38 Aligned_cols=22 Identities=14% Similarity=0.164 Sum_probs=16.7
Q ss_pred HHHHHHHhCCCcEEecccCCcc
Q psy17541 618 QVSLVARAFNVPVLAACETHKF 639 (717)
Q Consensus 618 ~VALaAK~~~VPVyV~cEtyKF 639 (717)
...++|+..+||++.+...+-+
T Consensus 131 ~~~~aA~~~giP~v~~~~~~~~ 152 (415)
T 3rsc_A 131 AGQLLAARWRRPAVRLSAAFAS 152 (415)
T ss_dssp HHHHHHHHTTCCEEEEESSCCC
T ss_pred HHHHHHHHhCCCEEEEEecccc
Confidence 3467789999999988765543
No 250
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=40.60 E-value=61 Score=35.34 Aligned_cols=96 Identities=11% Similarity=-0.007 Sum_probs=55.9
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHAL 604 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaV 604 (717)
.|..||+.|.+.+-...+....+.|-.+. |++.+... -+..|.+.| .++++...--...+..++.||...
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~--vi~~~~~~----~~~~l~~~~-~i~~~~~~~~~~~l~~~~lVi~at--- 80 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLT--VNALTFIP----QFTVWANEG-MLTLVEGPFDETLLDSCWLAIAAT--- 80 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEE--EEESSCCH----HHHHHHTTT-SCEEEESSCCGGGGTTCSEEEECC---
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEE--EEcCCCCH----HHHHHHhcC-CEEEEECCCCccccCCccEEEEcC---
Confidence 46789999999988888888877786544 44433222 123444322 234443211111233455554422
Q ss_pred ecCCCe-ecccchHHHHHHHHhCCCcEEecccCC
Q psy17541 605 LSNGAV-MSRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 605 laNG~V-vNKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
|.- + ...++..|+.+||||-|+.+.-
T Consensus 81 ---~~~~~----n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 81 ---DDDTV----NQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp ---SCHHH----HHHHHHHHHHTTCEEEETTCTT
T ss_pred ---CCHHH----HHHHHHHHHHcCCEEEECCCcc
Confidence 211 2 3578899999999998876543
No 251
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=40.53 E-value=2.4e+02 Score=30.04 Aligned_cols=103 Identities=18% Similarity=0.189 Sum_probs=67.6
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCC------CCch--------hH----HHHHHHHHhC--CCcEEEEcc-
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDG------SPWY--------EG----KEMLRRLVKH--QVDCSYVLL- 584 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvES------RP~~--------EG----r~lA~~L~~~--GI~vTyI~D- 584 (717)
+..||..|.+.+=-.++......|.. ++.++|. .... -| ..++..|.+. ++.++.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg-~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~ 112 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVR-KITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLS 112 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC-EEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEecc
Confidence 47899999988766666766666754 3444442 1111 13 3456667764 566766652
Q ss_pred ------------------hHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccCCccc
Q psy17541 585 ------------------SAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKFC 640 (717)
Q Consensus 585 ------------------SAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyKFs 640 (717)
..+..++..+|.||.+.|..- .-+.+..+|..+++|++-.+ +-|.
T Consensus 113 i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~---------tR~lin~~c~~~~~plI~aa--~G~~ 175 (340)
T 3rui_A 113 IPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRE---------SRWLPSLLSNIENKTVINAA--LGFD 175 (340)
T ss_dssp CCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTG---------GGHHHHHHHHHTTCEEEEEE--ECSS
T ss_pred ccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHH---------HHHHHHHHHHHcCCcEEEee--ecce
Confidence 124567788999998877543 23788899999999999754 4444
No 252
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=40.47 E-value=3.2e+02 Score=27.96 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=13.6
Q ss_pred CCeEEEecCchHHHHHHHHH
Q psy17541 526 DDVILTYGCSSLVEKILLTA 545 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A 545 (717)
..+++|.|.+..+..+|..+
T Consensus 79 ~~v~~~~g~t~a~~~~~~~~ 98 (432)
T 3a9z_A 79 QDIIFTSGGTESNNLVIHST 98 (432)
T ss_dssp GGEEEESCHHHHHHHHHHHH
T ss_pred CeEEEeCChHHHHHHHHHHH
Confidence 46788888777766665554
No 253
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=40.31 E-value=82 Score=27.32 Aligned_cols=81 Identities=14% Similarity=0.093 Sum_probs=47.7
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHH-hh--hccEEEEceeeEecCCCeecccchHHHHHHHHh-
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYI-MR--EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA- 625 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyi-M~--~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~- 625 (717)
...+|+|+|..|... ..+...|...|+.|....+..-+.- +. ..|.||+..+. .+ .-|.-.+..+-..
T Consensus 2 ~~~~ILivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dliild~~l--~~-----~~g~~~~~~l~~~~ 73 (155)
T 1qkk_A 2 AAPSVFLIDDDRDLR-KAMQQTLELAGFTVSSFASATEALAGLSADFAGIVISDIRM--PG-----MDGLALFRKILALD 73 (155)
T ss_dssp --CEEEEECSCHHHH-HHHHHHHHHTTCEEEEESCHHHHHHTCCTTCCSEEEEESCC--SS-----SCHHHHHHHHHHHC
T ss_pred CCCEEEEEeCCHHHH-HHHHHHHHHcCcEEEEECCHHHHHHHHHhCCCCEEEEeCCC--CC-----CCHHHHHHHHHhhC
Confidence 346788888876543 3456677788998876665332222 22 47888887642 21 2243334444333
Q ss_pred CCCcEEecccCCc
Q psy17541 626 FNVPVLAACETHK 638 (717)
Q Consensus 626 ~~VPVyV~cEtyK 638 (717)
.++||++++....
T Consensus 74 ~~~pii~ls~~~~ 86 (155)
T 1qkk_A 74 PDLPMILVTGHGD 86 (155)
T ss_dssp TTSCEEEEECGGG
T ss_pred CCCCEEEEECCCC
Confidence 4899999877543
No 254
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=40.20 E-value=1.5e+02 Score=31.71 Aligned_cols=97 Identities=16% Similarity=0.253 Sum_probs=52.8
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHH-HHHhCCCcEEEEcch---HHHHHhhhccEEEEcee
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLR-RLVKHQVDCSYVLLS---AVSYIMREVSKVIIGAH 602 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~-~L~~~GI~vTyI~DS---AVsyiM~~VdkVLLGAd 602 (717)
.|++-+-+..+..+|......|. +|++. .|.+.|. .+.. .+...|+.+.++... ++...+..-.++|+ .+
T Consensus 100 ~v~~~sG~~Ai~~al~al~~~Gd--~Vi~~--~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~-~e 174 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTLARAGD--SVVTT--DRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLF-LE 174 (430)
T ss_dssp EEEESCHHHHHHHHHHHHCCTTC--EEEEE--TTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEE-EE
T ss_pred EEEECCHHHHHHHHHHHHhCCCC--EEEEc--CCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEE-EE
Confidence 34443333444444444433343 45553 4566664 3332 667789999999743 34444443233433 22
Q ss_pred eEe-cCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 603 ALL-SNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 603 aVl-aNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
... ..|.++. --.|+-+|+++|++|+|
T Consensus 175 ~p~NptG~~~d---l~~i~~la~~~g~~liv 202 (430)
T 3ri6_A 175 TISNPQLQVAD---LEALSKVVHAKGIPLVV 202 (430)
T ss_dssp SSCTTTCCCCC---HHHHHHHHHTTTCCEEE
T ss_pred CCCCCCCeecC---HHHHHHHHHHcCCEEEE
Confidence 222 2344443 24688889999999987
No 255
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=40.07 E-value=1e+02 Score=32.81 Aligned_cols=101 Identities=14% Similarity=0.151 Sum_probs=56.8
Q ss_pred CCCeEEEecCchHHHHHHHHHHH-----cCC-eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH---------HHH
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHE-----KGT-KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA---------VSY 589 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e-----~Gk-~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA---------Vsy 589 (717)
...+++|.|-+..+..++..+.. .|. +-+|++. +|.+.+. ...+...|+.+.+|.... +-.
T Consensus 126 ~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~--~~~h~~~--~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~ 201 (497)
T 3mc6_A 126 TGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAP--VTAHAGF--DKAAYYFGMKLRHVELDPTTYQVDLGKVKK 201 (497)
T ss_dssp TCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEE--TTSCHHH--HHHHHHSCCEEEEECBCTTTCSBCTTTTGG
T ss_pred CCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEe--CCccHHH--HHHHHHcCCeEEEEecCcccCcCCHHHHHH
Confidence 34688888888777777766643 241 1256653 4555553 334445699988887432 222
Q ss_pred HhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 590 IMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 590 iM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.+.+-.++|+...--...|.+.. + -.|+-+|+.||++|+|
T Consensus 202 ~i~~~~~~v~~~~p~nptG~~~~-l--~~i~~la~~~g~~liv 241 (497)
T 3mc6_A 202 FINKNTVLLVGSAPNFPHGIADD-I--EGLGKIAQKYKLPLHV 241 (497)
T ss_dssp GCCSSEEEEEEETTCTTTCCCCS-C--TTTTTHHHHTTCCEEE
T ss_pred HHhhCCEEEEEECCCCCCCcCCC-H--HHHHHHHHHhCCEEEE
Confidence 22222344443322223454433 2 2477789999999997
No 256
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=40.07 E-value=61 Score=32.43 Aligned_cols=98 Identities=14% Similarity=0.210 Sum_probs=52.7
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------HHHHHh-hhcc
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS--------AVSYIM-REVS 595 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS--------AVsyiM-~~Vd 595 (717)
...+++|-|.+..+..++......|. +|++.+ |.+.+. ...+...|+.+.++... .+-..+ ++..
T Consensus 84 ~~~v~~~~g~t~a~~~~~~~~~~~gd--~vl~~~--~~~~~~--~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~ 157 (363)
T 3ffh_A 84 EEELIFTAGVDELIELLTRVLLDTTT--NTVMAT--PTFVQY--RQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTT 157 (363)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCSTTC--EEEEEE--SSCHHH--HHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEE
T ss_pred hhhEEEeCCHHHHHHHHHHHHccCCC--EEEEcC--CChHHH--HHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCC
Confidence 34577777777776666555544443 566554 566653 33344568888888643 333333 2445
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhC--CCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAF--NVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~--~VPVyV 632 (717)
.|++ .+.-...|.++..- .+.-+++.+ |+.|++
T Consensus 158 ~v~~-~~p~nptG~~~~~~---~l~~l~~~~~~~~~li~ 192 (363)
T 3ffh_A 158 IVWI-CNPNNPTGNYIELA---DIQAFLDRVPSDVLVVL 192 (363)
T ss_dssp EEEE-ESSCTTTCCCCCHH---HHHHHHTTSCTTSEEEE
T ss_pred EEEE-eCCCCCcCCCcCHH---HHHHHHHhCCCCcEEEE
Confidence 5555 22222334444322 355555555 777765
No 257
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=40.04 E-value=1.1e+02 Score=32.25 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=54.3
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-------hHHHHHhh-----
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL-------SAVSYIMR----- 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D-------SAVsyiM~----- 592 (717)
..++++|-|.+..+..++......|. +|++. .|.+.|...+ +...|+.+..++. .++-..+.
T Consensus 140 ~~~v~~t~G~~~al~~~~~~l~~~Gd--~Vlv~--~p~y~~~~~~--~~~~g~~~~~v~~~~~g~d~~~L~~~l~~~~~~ 213 (448)
T 3aow_A 140 DNDIMITSGSQQALDLIGRVFLNPGD--IVVVE--APTYLAALQA--FNFYEPQYIQIPLDDEGMKVEILEEKLKELKSQ 213 (448)
T ss_dssp TSEEEEESSHHHHHHHHHHHHCCTTC--EEEEE--ESCCHHHHHH--HHTTCCEEEEEEEETTEECHHHHHHHHHHHHHT
T ss_pred hhhEEEeCcHHHHHHHHHHHHcCCCC--EEEEe--CCChHHHHHH--HHHcCCEEEEeccCCCCCCHHHHHHHHhhhhcc
Confidence 34678888877776666665544443 45553 3677775333 3447888777652 23444443
Q ss_pred --hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 --EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 --~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++..|++=...--..|.++..---..|+-+|+.|+++|++
T Consensus 214 ~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~ 255 (448)
T 3aow_A 214 GKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVE 255 (448)
T ss_dssp TCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 2322222111111124443322223677788999998776
No 258
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=39.96 E-value=23 Score=34.74 Aligned_cols=98 Identities=11% Similarity=-0.025 Sum_probs=50.0
Q ss_pred CeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc---chHHHHHhhh-ccEEEEce
Q psy17541 527 DVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL---LSAVSYIMRE-VSKVIIGA 601 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~---DSAVsyiM~~-VdkVLLGA 601 (717)
.+||+.| +..|-..|.. +.+.| ++|+++.-++.. + ..++.+...- ..++..++.. +|.||--|
T Consensus 4 ~~ilVtG-aG~iG~~l~~~L~~~g--~~V~~~~r~~~~--------~-~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a 71 (286)
T 3gpi_A 4 SKILIAG-CGDLGLELARRLTAQG--HEVTGLRRSAQP--------M-PAGVQTLIADVTRPDTLASIVHLRPEILVYCV 71 (286)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTT--CCEEEEECTTSC--------C-CTTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred CcEEEEC-CCHHHHHHHHHHHHCC--CEEEEEeCCccc--------c-ccCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence 4566667 4555444443 33445 355555433321 0 1334332221 1233444555 77777554
Q ss_pred eeEec---CCCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 602 HALLS---NGAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 602 daVla---NG~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
-.... .-.-+|-.||..+.-+|+..+++-+|.+.+
T Consensus 72 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 72 AASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp HHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 21111 111246789999999999999876665544
No 259
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=39.92 E-value=58 Score=33.10 Aligned_cols=93 Identities=16% Similarity=0.152 Sum_probs=63.1
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceee
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAda 603 (717)
..+..|..+||-.-+...|. .+ ++|+|+|-.|..-|. + ..+|+.-.++++++|.||+=+.+
T Consensus 114 ~~~~kV~vIG~~p~l~~~l~-----~~-~~v~V~d~~p~~~~~---------~----~~~~~~e~~~l~~~D~v~iTGsT 174 (249)
T 3npg_A 114 DEIKRIAIIGNMPPVVRTLK-----EK-YEVYVFERNMKLWDR---------D----TYSDTLEYHILPEVDGIIASASC 174 (249)
T ss_dssp SCCSEEEEESCCHHHHHHHT-----TT-SEEEEECCSGGGCCS---------S----EECGGGHHHHGGGCSEEEEETTH
T ss_pred cCCCEEEEECCCHHHHHHHh-----cc-CCEEEEECCCcccCC---------C----CCChhHHHhhhccCCEEEEEeee
Confidence 35689999999886544443 23 799999999986442 1 23565555799999999987766
Q ss_pred EecCCCeecccchHHHHHHHHh-CCCcEEecccCCccccccc
Q psy17541 604 LLSNGAVMSRAGTAQVSLVARA-FNVPVLAACETHKFCERVQ 644 (717)
Q Consensus 604 VlaNG~VvNKiGT~~VALaAK~-~~VPVyV~cEtyKFs~rv~ 644 (717)
+. ||+ ..- ++... ...+|+++.+|--+.+...
T Consensus 175 lv-N~T-------i~~-lL~~~~~~~~vvl~GPS~~~~P~~~ 207 (249)
T 3npg_A 175 IV-NGT-------LDM-ILDRAKKAKLIVITGPTGQLLPEFL 207 (249)
T ss_dssp HH-HTC-------HHH-HHHHCSSCSEEEEESGGGCSCGGGG
T ss_pred ec-cCC-------HHH-HHHhCcccCeEEEEecCchhhHHHH
Confidence 54 443 221 33322 3557899999988888654
No 260
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=39.84 E-value=72 Score=32.82 Aligned_cols=106 Identities=15% Similarity=0.205 Sum_probs=54.9
Q ss_pred ccCCCeEEEecCchHHH--HHHHHHHH--cCC-------eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc-------
Q psy17541 523 LANDDVILTYGCSSLVE--KILLTAHE--KGT-------KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL------- 584 (717)
Q Consensus 523 I~dGdvILTyg~SStV~--~vL~~A~e--~Gk-------~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D------- 584 (717)
+....+++|-|.+..+. .++..... .|. .-+|+|.+ |.+.+...+ +...|+.+..++.
T Consensus 85 ~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~--p~y~~~~~~--~~~~g~~~~~v~~~~~g~d~ 160 (423)
T 3ez1_A 85 VKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTV--PGYDRHFLL--LQTLGFELLTVDMQSDGPDV 160 (423)
T ss_dssp SCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEE--SCCHHHHHH--HHHHTCEEEEEEEETTEECH
T ss_pred CChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcC--CCcHHHHHH--HHHcCCEEEeccCCCCCCCH
Confidence 33446888888877765 33433333 321 23566543 667664332 4446887776642
Q ss_pred hHHHHHh---hhccEEEEceeeEecCCCeecccchHHHHHHH-HhCCCcEEe
Q psy17541 585 SAVSYIM---REVSKVIIGAHALLSNGAVMSRAGTAQVSLVA-RAFNVPVLA 632 (717)
Q Consensus 585 SAVsyiM---~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaA-K~~~VPVyV 632 (717)
.++-..+ +++..|++=...=-..|.++..--=..|+-+| ++|++.|++
T Consensus 161 ~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~ 212 (423)
T 3ez1_A 161 DAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFA 212 (423)
T ss_dssp HHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEE
T ss_pred HHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEE
Confidence 3344444 23333432211112235454444333566666 889987765
No 261
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=39.80 E-value=33 Score=30.88 Aligned_cols=78 Identities=17% Similarity=0.183 Sum_probs=50.4
Q ss_pred CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-ch--HHHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHH
Q psy17541 549 GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-LS--AVSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR 624 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-DS--AVsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK 624 (717)
.++.+|.|+|-.|... ..+...|.+.|..|+... +. |+..+-. ..|.||+ |-.+.+++ | +.++-.-+
T Consensus 6 ~r~~rILiVdD~~~~~-~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~~Dlvll--Di~mP~~~-----G-~el~~~lr 76 (123)
T 2lpm_A 6 ERRLRVLVVEDESMIA-MLIEDTLCELGHEVAATASRMQEALDIARKGQFDIAII--DVNLDGEP-----S-YPVADILA 76 (123)
T ss_dssp CCCCCEEEESSSTTTS-HHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCCSSEEEE--CSSSSSCC-----S-HHHHHHHH
T ss_pred CCCCEEEEEeCCHHHH-HHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCCCEEEE--ecCCCCCC-----H-HHHHHHHH
Confidence 4678899999887654 345667888899886443 32 3333322 5888888 44444321 3 45555556
Q ss_pred hCCCcEEeccc
Q psy17541 625 AFNVPVLAACE 635 (717)
Q Consensus 625 ~~~VPVyV~cE 635 (717)
..++||++++.
T Consensus 77 ~~~ipvI~lTa 87 (123)
T 2lpm_A 77 ERNVPFIFATG 87 (123)
T ss_dssp HTCCSSCCBCT
T ss_pred cCCCCEEEEec
Confidence 78999998865
No 262
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=39.62 E-value=72 Score=32.16 Aligned_cols=99 Identities=15% Similarity=0.241 Sum_probs=52.5
Q ss_pred HHHHHhhccCCCeEEEec-CchHHHHHHHHHHHcC--C-eeEEEEcC-CCC---chhHHHHHHHHHhC-CCcEEEEcch-
Q psy17541 516 CMFFHNKLANDDVILTYG-CSSLVEKILLTAHEKG--T-KFRVIIVD-GSP---WYEGKEMLRRLVKH-QVDCSYVLLS- 585 (717)
Q Consensus 516 a~~A~e~I~dGdvILTyg-~SStV~~vL~~A~e~G--k-~FrVIVvE-SRP---~~EGr~lA~~L~~~-GI~vTyI~DS- 585 (717)
+++..+.|.++++ |-++ +++++..+..+..... . ..+|+=++ +-+ ...-..|.+.|.++ |+++.++...
T Consensus 48 A~~l~~~l~~~~v-iGla~~G~T~~~~~~~l~~~~~~~~~v~~v~L~ggl~~~~~~~~~~~~~~la~~~~~~~~~l~~P~ 126 (264)
T 2r5f_A 48 AHYLETSLSAQDH-IGISSWSSTIRAMVSHMHPQPGKQSAQEVVQLLGGVGNKGAFEATLLTQRLATLLNCPAFLLPSQS 126 (264)
T ss_dssp HHHHHHHCCTTCE-EEECTTCHHHHHHHHTCCC--CCCCCSEEEECEECCC--CHHHHHHHHHHHHHHHTSCEECCCCC-
T ss_pred HHHHHHhCCCCCE-EEECcchHHHHHHHHhhccccCCCCCcEEEECCCCCCCccccCHHHHHHHHHHHhCCeeEEeeCCc
Confidence 3344456777765 5667 9999888887664322 3 56666444 322 22224567777765 7766543221
Q ss_pred ---------------HHHHHh---hhccEEEEceeeEecCCCeecccch
Q psy17541 586 ---------------AVSYIM---REVSKVIIGAHALLSNGAVMSRAGT 616 (717)
Q Consensus 586 ---------------AVsyiM---~~VdkVLLGAdaVlaNG~VvNKiGT 616 (717)
.+..++ .++|.+|+|-=...+||.+++ -|+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Di~l~GIG~~~~~~~i~~-~g~ 174 (264)
T 2r5f_A 127 IEQSVESKQRIVEMEEVKEVLHRFDSITLAIVGIGELEPSQLLRN-SGN 174 (264)
T ss_dssp ---------CCHHHHHHHHHHHHTTTCCEEEECCEECC-----------
T ss_pred ccCCHHHHHHHHcChHHHHHHHHHhcCCEEEEecCCCCCCccHhh-cCC
Confidence 122222 369999999887777899976 575
No 263
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=39.60 E-value=1e+02 Score=31.67 Aligned_cols=89 Identities=19% Similarity=0.134 Sum_probs=53.9
Q ss_pred CeEEEecCchHHHHHH-HHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHh-hhccEEEEceeeE
Q psy17541 527 DVILTYGCSSLVEKIL-LTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIM-REVSKVIIGAHAL 604 (717)
Q Consensus 527 dvILTyg~SStV~~vL-~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM-~~VdkVLLGAdaV 604 (717)
..|+.+|-..+=...+ +.+++.| ++|.+.|.++... +...|.+.||++.+-.+.. .+. .++|.|+++.- |
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G--~~V~~~D~~~~~~---~~~~L~~~gi~v~~g~~~~--~l~~~~~d~vV~Spg-i 76 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG--FEVSGCDAKMYPP---MSTQLEALGIDVYEGFDAA--QLDEFKADVYVIGNV-A 76 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT--CEEEEEESSCCTT---HHHHHHHTTCEEEESCCGG--GGGSCCCSEEEECTT-C
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC--CEEEEEcCCCCcH---HHHHHHhCCCEEECCCCHH--HcCCCCCCEEEECCC-c
Confidence 4677777654433323 2333444 6889999987643 4567888999887544322 233 36788876541 2
Q ss_pred ecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 605 LSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 605 laNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
-. ..+.-..|++.|+||+=
T Consensus 77 ~~---------~~p~~~~a~~~gi~v~~ 95 (326)
T 3eag_A 77 KR---------GMDVVEAILNLGLPYIS 95 (326)
T ss_dssp CT---------TCHHHHHHHHTTCCEEE
T ss_pred CC---------CCHHHHHHHHcCCcEEe
Confidence 11 23555677888888874
No 264
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=39.47 E-value=1.1e+02 Score=30.11 Aligned_cols=99 Identities=13% Similarity=0.072 Sum_probs=55.6
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHH-----HHh-hhccEEEE
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVS-----YIM-REVSKVII 599 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVs-----yiM-~~VdkVLL 599 (717)
..+++|.|.+..+..++..+...|. +|++.+ |.+-|..+...+...|+.+.++....-+ .+- +++..|++
T Consensus 52 ~~i~~~~g~t~a~~~~~~~~~~~gd--~vl~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~v~~ 127 (352)
T 1iug_A 52 EVLILTGSGTLAMEALVKNLFAPGE--RVLVPV--YGKFSERFYEIALEAGLVVERLDYPYGDTPRPEDVAKEGYAGLLL 127 (352)
T ss_dssp EEEEEESCHHHHHHHHHHHHCCTTC--EEEEEE--CSHHHHHHHHHHHHTTCEEEEEECCTTCCCCTTTSCCSSCSEEEE
T ss_pred ceEEEcCchHHHHHHHHHhccCCCC--eEEEEe--CCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHhccCCcEEEE
Confidence 3567777777776666665544443 566543 4455544444456689988887632101 000 23344444
Q ss_pred ceeeEecCCCeecccchHHHHHHHHhC--CCcEEe
Q psy17541 600 GAHALLSNGAVMSRAGTAQVSLVARAF--NVPVLA 632 (717)
Q Consensus 600 GAdaVlaNG~VvNKiGT~~VALaAK~~--~VPVyV 632 (717)
.+.-...|.++. --.|+-+|+.| |+.|+|
T Consensus 128 -~~~~nptG~~~~---l~~i~~l~~~~~~~~~li~ 158 (352)
T 1iug_A 128 -VHSETSTGALAD---LPALARAFKEKNPEGLVGA 158 (352)
T ss_dssp -ESEETTTTEECC---HHHHHHHHHHHCTTCEEEE
T ss_pred -EEecCCcceecC---HHHHHHHHHhhCCCCEEEE
Confidence 233333465554 24677788888 987776
No 265
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=39.01 E-value=65 Score=32.08 Aligned_cols=69 Identities=10% Similarity=0.165 Sum_probs=43.0
Q ss_pred EEEecCchHHHHHHHHHHHcCCeeEEEE-cCCCCchhHHHHHHHHHhCCCcEEEEc----------chHHHHHhh--hcc
Q psy17541 529 ILTYGCSSLVEKILLTAHEKGTKFRVII-VDGSPWYEGKEMLRRLVKHQVDCSYVL----------LSAVSYIMR--EVS 595 (717)
Q Consensus 529 ILTyg~SStV~~vL~~A~e~Gk~FrVIV-vESRP~~EGr~lA~~L~~~GI~vTyI~----------DSAVsyiM~--~Vd 595 (717)
||.-|.++....+|... ..|..++|.. +-.+|...|...| .++|||+.++. |..+...+. ++|
T Consensus 10 vl~SG~Gsnl~all~~~-~~~~~~eI~~Vis~~~~a~~~~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~D 85 (215)
T 3tqr_A 10 VLISGNGTNLQAIIGAI-QKGLAIEIRAVISNRADAYGLKRA---QQADIPTHIIPHEEFPSRTDFESTLQKTIDHYDPK 85 (215)
T ss_dssp EEESSCCHHHHHHHHHH-HTTCSEEEEEEEESCTTCHHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCS
T ss_pred EEEeCCcHHHHHHHHHH-HcCCCCEEEEEEeCCcchHHHHHH---HHcCCCEEEeCccccCchhHhHHHHHHHHHhcCCC
Confidence 55558888866655544 4444556553 3347777775444 45799998874 344555555 488
Q ss_pred EEEEce
Q psy17541 596 KVIIGA 601 (717)
Q Consensus 596 kVLLGA 601 (717)
.+++-+
T Consensus 86 liv~ag 91 (215)
T 3tqr_A 86 LIVLAG 91 (215)
T ss_dssp EEEESS
T ss_pred EEEEcc
Confidence 888754
No 266
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=38.98 E-value=1.1e+02 Score=25.45 Aligned_cols=81 Identities=11% Similarity=0.062 Sum_probs=46.1
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHH--HHh-hhccEEEEceeeEecCCCeecccchHHHHHHHH-h
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVS--YIM-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR-A 625 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVs--yiM-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK-~ 625 (717)
...+|+|+|..|... ..+...|...|..+....+..-+ .+- ...|.||+..+---.+ |--.+..+-+ .
T Consensus 6 ~~~~ilivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~-------g~~~~~~l~~~~ 77 (130)
T 3eod_A 6 VGKQILIVEDEQVFR-SLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMN-------GLKLLEHIRNRG 77 (130)
T ss_dssp TTCEEEEECSCHHHH-HHHHHHHHHTTCEEEEESCHHHHHHHHTTCCCSEEEECCC------------CHHHHHHHHHTT
T ss_pred CCCeEEEEeCCHHHH-HHHHHHHHhCCceEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCC-------HHHHHHHHHhcC
Confidence 345788888766542 34556677788888776554322 221 2478888876532222 3333333333 3
Q ss_pred CCCcEEecccCCc
Q psy17541 626 FNVPVLAACETHK 638 (717)
Q Consensus 626 ~~VPVyV~cEtyK 638 (717)
.++||++++....
T Consensus 78 ~~~~ii~~t~~~~ 90 (130)
T 3eod_A 78 DQTPVLVISATEN 90 (130)
T ss_dssp CCCCEEEEECCCC
T ss_pred CCCCEEEEEcCCC
Confidence 4799999887553
No 267
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=38.55 E-value=1.4e+02 Score=24.89 Aligned_cols=55 Identities=13% Similarity=-0.015 Sum_probs=35.5
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCC-CchhHHHHHHHHHhC----CCcEEEEcc
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGS-PWYEGKEMLRRLVKH----QVDCSYVLL 584 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESR-P~~EGr~lA~~L~~~----GI~vTyI~D 584 (717)
.|-.|.+........ ..+.+ ..+.++++|-. |...|..+++.|.+. ++++.+++.
T Consensus 26 ~~~~v~~~~~~~~a~---~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 26 GEFDCTTAADGASGL---QQALA--HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp TTSEEEEESSHHHHH---HHHHH--SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred CCcEEEEECCHHHHH---HHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 455555554443333 33322 35888888854 788899999999985 567766664
No 268
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=38.47 E-value=1.3e+02 Score=31.78 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=56.7
Q ss_pred CeEEEecCchHHHHHHHHHHH-cCCeeEEEEcCCCCchhHHHH-HHHHHhC------C-----CcEEEEcch--------
Q psy17541 527 DVILTYGCSSLVEKILLTAHE-KGTKFRVIIVDGSPWYEGKEM-LRRLVKH------Q-----VDCSYVLLS-------- 585 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e-~Gk~FrVIVvESRP~~EGr~l-A~~L~~~------G-----I~vTyI~DS-------- 585 (717)
.+++|-|-|..++.+|+.|.. .|+. .|++. .|.+.|..+ +..+... + -.+..++..
T Consensus 124 ~v~~~~sGseA~~~Alk~a~~~~g~~-~ii~~--~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (451)
T 3oks_A 124 RSALFNSGSEAVENAVKIARSHTHKP-AVVAF--DHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEF 200 (451)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCCC-EEEEE--TTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGG
T ss_pred EEEEeCcHHHHHHHHHHHHHHhcCCC-eEEEE--cCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccc
Confidence 578888888888888887764 3443 45544 345555422 2223111 1 144555432
Q ss_pred ----------HHHHHh---h----hccEEEEceeeEecCCCeeccc-c-hHHHHHHHHhCCCcEEe
Q psy17541 586 ----------AVSYIM---R----EVSKVIIGAHALLSNGAVMSRA-G-TAQVSLVARAFNVPVLA 632 (717)
Q Consensus 586 ----------AVsyiM---~----~VdkVLLGAdaVlaNG~VvNKi-G-T~~VALaAK~~~VPVyV 632 (717)
++..+. . .-+..++=.+-+..+|+++..- + --.|+-+|++|++.+++
T Consensus 201 g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~ 266 (451)
T 3oks_A 201 GKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIA 266 (451)
T ss_dssp CTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred ccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 222221 1 1223333346677887776543 3 34577789999998875
No 269
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=38.25 E-value=2e+02 Score=30.23 Aligned_cols=69 Identities=16% Similarity=0.154 Sum_probs=40.4
Q ss_pred cCCeeEEEEc-CCCCchhHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHH
Q psy17541 548 KGTKFRVIIV-DGSPWYEGKEMLRRLVKHQVDCSYVLL---SAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVA 623 (717)
Q Consensus 548 ~Gk~FrVIVv-ESRP~~EGr~lA~~L~~~GI~vTyI~D---SAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaA 623 (717)
....++++++ -.+| .-+..++++....-++.++.- .-+.++|..+|.|+..+ |+.+ +=|
T Consensus 254 ~~~~~~~v~~~~~~~--~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~vv~~S-------------Gg~~--~EA 316 (403)
T 3ot5_A 254 SREDTELVYPMHLNP--AVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYLVFTDS-------------GGVQ--EEA 316 (403)
T ss_dssp HCTTEEEEEECCSCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEEEEECC-------------HHHH--HHG
T ss_pred hCCCceEEEecCCCH--HHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCEEEECC-------------ccHH--HHH
Confidence 3445676664 3223 223344443222224555542 26888999999875332 5544 778
Q ss_pred HhCCCcEEec
Q psy17541 624 RAFNVPVLAA 633 (717)
Q Consensus 624 K~~~VPVyV~ 633 (717)
-.+|+|+++.
T Consensus 317 ~a~g~PvV~~ 326 (403)
T 3ot5_A 317 PGMGVPVLVL 326 (403)
T ss_dssp GGTTCCEEEC
T ss_pred HHhCCCEEEe
Confidence 8899999986
No 270
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=38.24 E-value=1.3e+02 Score=29.98 Aligned_cols=69 Identities=12% Similarity=0.048 Sum_probs=41.8
Q ss_pred CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE---EcchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHh
Q psy17541 549 GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY---VLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA 625 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy---I~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~ 625 (717)
...+++++.+. |..+=+..++.+....-++.+ +....+..+|..+|.+++-. |+. .+=|-.
T Consensus 236 ~~~~~~i~~~g-~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~s-------------g~~--~lEA~a 299 (375)
T 3beo_A 236 HEDVQVVYPVH-MNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAARSYLMLTDS-------------GGV--QEEAPS 299 (375)
T ss_dssp CTTEEEEEECC-SCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTCSEEEECC-------------HHH--HHHHHH
T ss_pred CCCeEEEEeCC-CCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHHhCcEEEECC-------------CCh--HHHHHh
Confidence 34577666433 322113444554321125666 44457889999999997643 433 566778
Q ss_pred CCCcEEec
Q psy17541 626 FNVPVLAA 633 (717)
Q Consensus 626 ~~VPVyV~ 633 (717)
+|+||++.
T Consensus 300 ~G~Pvi~~ 307 (375)
T 3beo_A 300 LGVPVLVL 307 (375)
T ss_dssp HTCCEEEC
T ss_pred cCCCEEEe
Confidence 89999986
No 271
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=38.20 E-value=1.6e+02 Score=29.05 Aligned_cols=98 Identities=13% Similarity=0.132 Sum_probs=53.3
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHHH-HHhCCCcEEEEcc---hHHHHHhh-hccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLRR-LVKHQVDCSYVLL---SAVSYIMR-EVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~~-L~~~GI~vTyI~D---SAVsyiM~-~VdkVLLG 600 (717)
+.|++-+.+..+..++..+...| -+|++. .|.+.+. ..+.. +...|+.+.++.. ..+-..+. +...|++
T Consensus 15 ~~i~~~sG~~a~~~~~~~~~~~g--~~v~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~- 89 (331)
T 1pff_A 15 ACAATASGMGAIAASVWTFLKAG--DHLISD--DCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLKPNTRIVYF- 89 (331)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEE--SCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCCTTEEEEEE-
T ss_pred eEEEeCChHHHHHHHHHHhcCCC--CEEEEc--CCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhcCCCeEEEE-
Confidence 45554444555444444443334 356665 4666664 23333 4568999998863 23333333 3444444
Q ss_pred eeeEecCCCeecccchHHHHHHHHh-CCCcEEe
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARA-FNVPVLA 632 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~-~~VPVyV 632 (717)
.+.--..|.++. -..++-+|++ ++++|+|
T Consensus 90 ~~~~nptG~~~~---~~~i~~~~~~~~~~~li~ 119 (331)
T 1pff_A 90 ETPANPTLKVID---IEDAVKQARKQKDILVIV 119 (331)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHTTSSSCEEEE
T ss_pred ECCCCCcCcccC---HHHHHHHHhhhcCCEEEE
Confidence 222223455553 3567788899 9998876
No 272
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=38.11 E-value=90 Score=32.67 Aligned_cols=97 Identities=14% Similarity=0.153 Sum_probs=52.4
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHH-HHHhCCCcEEEEcch---HHHHHhh-hccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLR-RLVKHQVDCSYVLLS---AVSYIMR-EVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~-~L~~~GI~vTyI~DS---AVsyiM~-~VdkVLLG 600 (717)
+.|++-+-+..+..+|. ....|. +|++.+ |.+.|. .... .+...|+.+.++... .+...+. +...|++
T Consensus 84 ~~i~~~sG~~ai~~~~~-l~~~gd--~Vl~~~--~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~- 157 (403)
T 3cog_A 84 YCLAFASGLAATVTITH-LLKAGD--QIICMD--DVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWI- 157 (403)
T ss_dssp EEEEESCHHHHHHHHHT-TSCTTC--EEEEES--SCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEE-
T ss_pred cEEEECCHHHHHHHHHH-HhCCCC--EEEEeC--CCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEE-
Confidence 44444333455555555 433343 566644 677763 3233 345689999999743 3333333 3344443
Q ss_pred eeeEecCCCeecccchHHHHHHHHhCC-CcEEe
Q psy17541 601 AHALLSNGAVMSRAGTAQVSLVARAFN-VPVLA 632 (717)
Q Consensus 601 AdaVlaNG~VvNKiGT~~VALaAK~~~-VPVyV 632 (717)
..---..|.++. -..|+-+|++++ ++|+|
T Consensus 158 ~~p~nptG~~~~---l~~i~~la~~~g~~~liv 187 (403)
T 3cog_A 158 ETPTNPTQKVID---IEGCAHIVHKHGDIILVV 187 (403)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHTSSSCCEEEE
T ss_pred ECCCCCCCeeeC---HHHHHHHHHHcCCCEEEE
Confidence 222223455553 356778889999 87776
No 273
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=38.07 E-value=75 Score=32.22 Aligned_cols=21 Identities=10% Similarity=0.042 Sum_probs=15.8
Q ss_pred HHHHHHHHhCCCcEEecccCC
Q psy17541 617 AQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 617 ~~VALaAK~~~VPVyV~cEty 637 (717)
+..+++|+..+||+++..-.+
T Consensus 125 ~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 125 LIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp HHHHHHHHHTTCCEEEECCSC
T ss_pred hHHHHHHHHhCCCEEEEecCC
Confidence 445678899999999875443
No 274
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=37.97 E-value=1.7e+02 Score=32.79 Aligned_cols=108 Identities=16% Similarity=0.112 Sum_probs=71.7
Q ss_pred HHHHHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCC--------------chhH----HHHHHHHHhC-
Q psy17541 515 ICMFFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSP--------------WYEG----KEMLRRLVKH- 575 (717)
Q Consensus 515 Ia~~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP--------------~~EG----r~lA~~L~~~- 575 (717)
++..+...|.+ ..||..|.+.+=-.++......|.. ++.++|... ..-| ..++.+|.+.
T Consensus 22 ~G~~~q~~L~~-~~VlvvG~GGlGseiak~La~aGVg-~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~lN 99 (531)
T 1tt5_A 22 WGDHGQEALES-AHVCLINATATGTEILKNLVLPGIG-SFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELN 99 (531)
T ss_dssp HHHHHHHHHHH-CEEEEECCSHHHHHHHHHHHTTTCS-EEEEECCCBBCHHHHHHCTTCCGGGBTSBHHHHHHHHHHTTC
T ss_pred cCHHHHHHHhc-CeEEEECcCHHHHHHHHHHHHcCCC-eEEEEeCCEechhhcccCccCChhhcCcHHHHHHHHHHHHhC
Confidence 66777777764 7888999988777777777777754 555555433 1124 2456777776
Q ss_pred -CCcEEEEcchHH------HHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 576 -QVDCSYVLLSAV------SYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 576 -GI~vTyI~DSAV------syiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
+++++.+...-- ..++...|.||.+.|.+- --+.+.-.|+.+++|++.+
T Consensus 100 p~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~---------~r~~ln~~c~~~~iplI~~ 155 (531)
T 1tt5_A 100 SDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPES---------TSLRLADVLWNSQIPLLIC 155 (531)
T ss_dssp TTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHH---------HHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHH---------HHHHHHHHHHHcCCCEEEE
Confidence 477777764321 134567899988765432 3356677889999999876
No 275
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=37.95 E-value=21 Score=36.30 Aligned_cols=105 Identities=11% Similarity=0.059 Sum_probs=59.5
Q ss_pred CCeEEEecCchHHHHHHHHHH-HcCCeeEEEEcCCCCchhHHHHHHHHH-hCCCcEEEEc----chHHHHHhhhccEEEE
Q psy17541 526 DDVILTYGCSSLVEKILLTAH-EKGTKFRVIIVDGSPWYEGKEMLRRLV-KHQVDCSYVL----LSAVSYIMREVSKVII 599 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~-e~Gk~FrVIVvESRP~~EGr~lA~~L~-~~GI~vTyI~----DSAVsyiM~~VdkVLL 599 (717)
+.+||+.|-+..|-..|..+. +. ..++|++++-++... ..|. ..++.+...- ...+..++.++|.||-
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~-----~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih 97 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILET-TDWEVFGMDMQTDRL-----GDLVKHERMHFFEGDITINKEWVEYHVKKCDVILP 97 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH-SSCEEEEEESCCTTT-----GGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhC-CCCEEEEEeCChhhh-----hhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence 468999998877766555443 33 135777776544221 1111 1344433322 2346667778888886
Q ss_pred ceeeEecCC--------CeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 600 GAHALLSNG--------AVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 600 GAdaVlaNG--------~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
-|-...... .-+|-.||..+.-+|+..+..|+.+.-.
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~ 142 (372)
T 3slg_A 98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTS 142 (372)
T ss_dssp CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCG
T ss_pred cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcH
Confidence 543221111 0246789999999998888555555443
No 276
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=37.75 E-value=92 Score=24.82 Aligned_cols=78 Identities=3% Similarity=0.033 Sum_probs=46.0
Q ss_pred EEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHHh---C
Q psy17541 553 RVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--VSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA---F 626 (717)
Q Consensus 553 rVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--VsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~---~ 626 (717)
+|+|+|..|... ..+...|...|+.|....+.. +..+-. ..|.||+..+. .+ .-|...+..+-.. .
T Consensus 3 ~iliv~~~~~~~-~~l~~~l~~~g~~v~~~~~~~~~~~~l~~~~~dlii~d~~~--~~-----~~~~~~~~~l~~~~~~~ 74 (119)
T 2j48_A 3 HILLLEEEDEAA-TVVCEMLTAAGFKVIWLVDGSTALDQLDLLQPIVILMAWPP--PD-----QSCLLLLQHLREHQADP 74 (119)
T ss_dssp EEEEECCCHHHH-HHHHHHHHHTTCEEEEESCHHHHHHHHHHHCCSEEEEECST--TC-----CTHHHHHHHHHHTCCCS
T ss_pred EEEEEeCCHHHH-HHHHHHHHhCCcEEEEecCHHHHHHHHHhcCCCEEEEecCC--CC-----CCHHHHHHHHHhccccC
Confidence 577777765433 345666777888887666432 222222 47888886542 21 2244444444444 5
Q ss_pred CCcEEecccCCc
Q psy17541 627 NVPVLAACETHK 638 (717)
Q Consensus 627 ~VPVyV~cEtyK 638 (717)
++||++++....
T Consensus 75 ~~~ii~~~~~~~ 86 (119)
T 2j48_A 75 HPPLVLFLGEPP 86 (119)
T ss_dssp SCCCEEEESSCC
T ss_pred CCCEEEEeCCCC
Confidence 799999887543
No 277
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=37.74 E-value=2.7e+02 Score=26.41 Aligned_cols=34 Identities=3% Similarity=-0.136 Sum_probs=28.5
Q ss_pred HHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEE
Q psy17541 566 KEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVII 599 (717)
Q Consensus 566 r~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLL 599 (717)
..+++.+.+.|+++..|+++.-+.+.+.+|.+|.
T Consensus 148 i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l~ 181 (212)
T 2i2w_A 148 IKAIAAAREKGMKVITLTGKDGGKMAGTADIEIR 181 (212)
T ss_dssp HHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEEE
T ss_pred HHHHHHHHHCCCeEEEEECCCCCchHHhCCEEEE
Confidence 4678888889999999999877777788998876
No 278
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=37.71 E-value=20 Score=36.72 Aligned_cols=81 Identities=9% Similarity=0.094 Sum_probs=54.9
Q ss_pred EEEEcCCCCchhH-HHHHHHHHhCCCcEEEEcchHHH---HHhhhccEEEEceeeEecCCCeecccchHHHHHHHHh--C
Q psy17541 553 RVIIVDGSPWYEG-KEMLRRLVKHQVDCSYVLLSAVS---YIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA--F 626 (717)
Q Consensus 553 rVIVvESRP~~EG-r~lA~~L~~~GI~vTyI~DSAVs---yiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~--~ 626 (717)
+|.++++..+.+| ..+...|.+.|++|+++....+. .-+.+.|.||++ | +.. +.+.-.++..+... .
T Consensus 6 ~vLiV~g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~~~~~~~L~~yDvIIl~-d-~~~-----~~l~~~~~~~L~~yV~~ 78 (259)
T 3rht_A 6 RVLYCGDTSLETAAGYLAGLMTSWQWEFDYIPSHVGLDVGELLAKQDLVILS-D-YPA-----ERMTAQAIDQLVTMVKA 78 (259)
T ss_dssp CEEEEESSCTTTTHHHHHHHHHHTTCCCEEECTTSCBCSSHHHHTCSEEEEE-S-CCG-----GGBCHHHHHHHHHHHHT
T ss_pred eEEEECCCCchhHHHHHHHHHHhCCceEEEecccccccChhHHhcCCEEEEc-C-Ccc-----ccCCHHHHHHHHHHHHh
Confidence 6777777666666 56777899999999999987763 467899999986 2 111 13344455544443 4
Q ss_pred CCcEEecccCCccc
Q psy17541 627 NVPVLAACETHKFC 640 (717)
Q Consensus 627 ~VPVyV~cEtyKFs 640 (717)
|-=++++....-|.
T Consensus 79 GGgLi~~gG~~s~~ 92 (259)
T 3rht_A 79 GCGLVMLGGWESYH 92 (259)
T ss_dssp TCEEEEECSTTSSS
T ss_pred CCeEEEecCccccc
Confidence 77788886654453
No 279
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=37.54 E-value=1.6e+02 Score=32.05 Aligned_cols=21 Identities=19% Similarity=0.170 Sum_probs=18.3
Q ss_pred eccCCCCccEEEeCCCCcCCC
Q psy17541 683 DITPSHLVTAVITELAIVPCT 703 (717)
Q Consensus 683 DvTPPeLIT~IITE~GIlpPs 703 (717)
=.||-..|+.||||+|+....
T Consensus 373 v~t~~~~v~~vvTE~Gva~l~ 393 (436)
T 2oas_A 373 VVTTRAHVHYIVTEYGAANLK 393 (436)
T ss_dssp EEECTTTCCEEEETTEEEECT
T ss_pred cccCcccCCEEECCCEEEECC
Confidence 468899999999999998764
No 280
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=37.51 E-value=1.3e+02 Score=32.48 Aligned_cols=102 Identities=17% Similarity=0.161 Sum_probs=52.9
Q ss_pred cCCCeEEEecCchHHHHHHHHHH-HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c---------hHHHHHhh
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAH-EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L---------SAVSYIMR 592 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~-e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D---------SAVsyiM~ 592 (717)
...++++|-|.+..+..++.... ..| =.|+|.+ |.+.+.. ..+...|..+..+. | ..+-..+.
T Consensus 156 ~~~~i~~t~G~~~al~~~~~~l~~~~g--d~Vlv~~--p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~ 229 (500)
T 3tcm_A 156 NADDIFLTDGASPGVHLMMQLLIRNEK--DGILVPI--PQYPLYS--ASIALHGGALVPYYLNESTGWGLETSDVKKQLE 229 (500)
T ss_dssp CGGGEEEESSSHHHHHHHHHHHCCSTT--EEEEEEE--SCCTHHH--HHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHH
T ss_pred CcccEEEcCCHHHHHHHHHHHHcCCCC--CEEEEeC--CCcHhHH--HHHHHcCCEEEEEecccccCCCCCHHHHHHHHH
Confidence 34467888888777665555442 223 2455433 5555433 23344677766654 1 22333333
Q ss_pred h-------ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 E-------VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 ~-------VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+ +..|++- .-=-..|.+++.---..|+-+|+.+++.+++
T Consensus 230 ~~~~~~~~~k~ivl~-~p~NPtG~~~s~~~l~~i~~la~~~~~~li~ 275 (500)
T 3tcm_A 230 DARSRGINVRALVVI-NPGNPTGQVLAEENQYDIVKFCKNEGLVLLA 275 (500)
T ss_dssp HHHHTTCEEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHhcCCCceEEEEE-CCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 2 2233221 1112235555555455666678888887776
No 281
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=37.39 E-value=1.7e+02 Score=28.58 Aligned_cols=63 Identities=13% Similarity=0.010 Sum_probs=36.2
Q ss_pred HHHHHhCCCc---EEEEcchHHHHHh---h--hccEEEEceeeEecCCCeec-ccchHHHHHHHHhCCCcEEeccc
Q psy17541 569 LRRLVKHQVD---CSYVLLSAVSYIM---R--EVSKVIIGAHALLSNGAVMS-RAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 569 A~~L~~~GI~---vTyI~DSAVsyiM---~--~VdkVLLGAdaVlaNG~VvN-KiGT~~VALaAK~~~VPVyV~cE 635 (717)
...+.+.|++ +.+........++ . ++|.|++|++.- |++-. -.|+-.-.+ .++..+||+|+=+
T Consensus 205 ~~~~~~~g~~~~~~~v~~g~~~~~I~~~a~~~~~dLiVmG~~g~---~~~~~~~~Gsv~~~v-l~~~~~pVLvv~~ 276 (290)
T 3mt0_A 205 RTFQAEYGFSDEQLHIEEGPADVLIPRTAQKLDAVVTVIGTVAR---TGLSGALIGNTAEVV-LDTLESDVLVLKP 276 (290)
T ss_dssp HHHHHHHTCCTTTEEEEESCHHHHHHHHHHHHTCSEEEEECCSS---CCGGGCCSCHHHHHH-HTTCSSEEEEECC
T ss_pred HHHHHHcCCCcceEEEeccCHHHHHHHHHHhcCCCEEEECCCCC---cCCcceecchHHHHH-HhcCCCCEEEECC
Confidence 3344456874 3344433333333 3 499999999753 33332 356654444 4667899999854
No 282
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=37.38 E-value=91 Score=30.77 Aligned_cols=71 Identities=14% Similarity=0.115 Sum_probs=41.3
Q ss_pred eEEEecCchHHHHHHHHHHHcCC-eeEEE-EcCCCCchhHHHHHHHHHhCCCcEEEEc----------chHHHHHhh--h
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGT-KFRVI-IVDGSPWYEGKEMLRRLVKHQVDCSYVL----------LSAVSYIMR--E 593 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk-~FrVI-VvESRP~~EGr~lA~~L~~~GI~vTyI~----------DSAVsyiM~--~ 593 (717)
+||.-|.++.... |..+...|. .++|. |+-.+|...|...| .++|||+.++. |..+...+. +
T Consensus 4 ~vl~Sg~gsnl~a-li~~~~~~~~~~~i~~Vis~~~~~~~~~~A---~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~ 79 (212)
T 1jkx_A 4 VVLISGNGSNLQA-IIDACKTNKIKGTVRAVFSNKADAFGLERA---RQAGIATHTLIASAFDSREAYDRELIHEIDMYA 79 (212)
T ss_dssp EEEESSCCHHHHH-HHHHHHTTSSSSEEEEEEESCTTCHHHHHH---HHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGC
T ss_pred EEEEECCcHHHHH-HHHHHHcCCCCceEEEEEeCCCchHHHHHH---HHcCCcEEEeCcccccchhhccHHHHHHHHhcC
Confidence 4666777777444 455555553 35543 33344555564433 56899998865 234444454 5
Q ss_pred ccEEEEcee
Q psy17541 594 VSKVIIGAH 602 (717)
Q Consensus 594 VdkVLLGAd 602 (717)
+|.+++-+=
T Consensus 80 ~Dliv~agy 88 (212)
T 1jkx_A 80 PDVVVLAGF 88 (212)
T ss_dssp CSEEEESSC
T ss_pred CCEEEEeCh
Confidence 788877543
No 283
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=37.20 E-value=2.4e+02 Score=25.70 Aligned_cols=34 Identities=9% Similarity=0.082 Sum_probs=28.4
Q ss_pred HHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEE
Q psy17541 566 KEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVII 599 (717)
Q Consensus 566 r~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLL 599 (717)
..+++.+.+.|+++..|+++.-+.+.+.+|.+|.
T Consensus 127 ~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l~ 160 (188)
T 1tk9_A 127 LEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLV 160 (188)
T ss_dssp HHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEEE
T ss_pred HHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEEE
Confidence 5678888889999999999887777788898874
No 284
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=37.14 E-value=49 Score=36.08 Aligned_cols=117 Identities=10% Similarity=0.043 Sum_probs=55.7
Q ss_pred HHHH-hhccCCCeEEEecCchHHHHHHHHHHHc---CCeeEEEEcC--CCC---------------chhHHHHHHHHHhC
Q psy17541 517 MFFH-NKLANDDVILTYGCSSLVEKILLTAHEK---GTKFRVIIVD--GSP---------------WYEGKEMLRRLVKH 575 (717)
Q Consensus 517 ~~A~-e~I~dGdvILTyg~SStV~~vL~~A~e~---Gk~FrVIVvE--SRP---------------~~EGr~lA~~L~~~ 575 (717)
+.|+ .+|+||++|...|+...=..++....++ -+.++|+-.- ..+ ++-|-. .+++...
T Consensus 15 ~eAv~~~IkdG~tV~~ggf~g~P~~Li~AL~~~~~~~~dLtli~~~~~~~~~~~~~~l~~~i~~~~~~~g~~-~r~~i~~ 93 (439)
T 3d3u_A 15 DEAVVDSLKPGTKVVFGHAAAAPVRFSQAMYRQREKLENITVFHMLYFGDAPHLAPEMRSHVHPTLNFLEGN-SRPASRD 93 (439)
T ss_dssp HHHHHHHCCTTCEEEECCBTTCCHHHHHHHHHTTTTCCSEEEECSCBSSCCTTSSGGGTTTEEEEC--------------
T ss_pred HHHHHhhCCCcCEEEECcccChHHHHHHHHHHhhCCCCCEEEEEecCCCcchhccHHhCCcEEEEECCCChH-HHHHHHc
Confidence 3445 6799999999998854322333322222 2567777331 111 111222 2333334
Q ss_pred C-CcEEEEcchHH-HHHhh---hccEEEEceeeEecCCCeecccchH-HHHHHHHhCCCcEEecccC
Q psy17541 576 Q-VDCSYVLLSAV-SYIMR---EVSKVIIGAHALLSNGAVMSRAGTA-QVSLVARAFNVPVLAACET 636 (717)
Q Consensus 576 G-I~vTyI~DSAV-syiM~---~VdkVLLGAdaVlaNG~VvNKiGT~-~VALaAK~~~VPVyV~cEt 636 (717)
| +..+-+..+.+ .|++. .+|..|+.|...-.+|.+.- |+. ..+.++.....-|+|-++.
T Consensus 94 G~~~~~P~~ls~~~~~l~~~~l~~DVAlI~as~~D~~Gnls~--g~s~~~~~~~~~aA~~VIveVn~ 158 (439)
T 3d3u_A 94 RRVDFIPCHFHEVPELFRQGFFPLDVAVVQVSTPNEEGYCSF--GVSCDYTKAAAECAPVVVAEVNK 158 (439)
T ss_dssp -------CCGGGHHHHHTTSSSCCSEEEEEEECCCTTSEEEC--TTBCBTHHHHHHHCSEEEEEEES
T ss_pred CCCeEECCCcchHHHHHHcCCCCCCEEEEEEecCCCCceEEE--eccccchHHHHhhCCeEEEEECC
Confidence 4 22332323333 34443 58999999999999998755 432 2333333334445554443
No 285
>2z1d_A Hydrogenase expression/formation protein HYPD; [NIFE] hydrogenase maturation, [4Fe-4S] cluster, thiol redox binding protein; HET: CSW; 2.07A {Thermococcus kodakarensis}
Probab=37.08 E-value=41 Score=36.49 Aligned_cols=48 Identities=17% Similarity=0.288 Sum_probs=41.9
Q ss_pred cchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 583 LLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 583 ~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
+-.++.++|..=+ .-|+++.=|.|..-+|+-.---+|..|++|++|..
T Consensus 180 ~pPa~~all~~~~----~idgfi~PGHVstIiG~~~y~~l~~~y~~P~VVaG 227 (372)
T 2z1d_A 180 TPPAVEVLLKQGT----VFQGLIAPGHVSTIIGVKGWEYLTEKYGIPQVVAG 227 (372)
T ss_dssp HHHHHHHHHHTSC----CCSEEEEEHHHHHHHTTHHHHHHHHHHCCCEEEEC
T ss_pred cHHHHHHHHcCCC----cCcEEEecCeeeEEeccchhHHHHHHcCCCEEEcC
Confidence 4578888887666 67888888999999999999999999999999954
No 286
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=36.93 E-value=50 Score=35.61 Aligned_cols=111 Identities=14% Similarity=0.106 Sum_probs=61.6
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCC-eeEEEEcCCCCchh-HHH-H-----------H---HHHHhCCCcEEEEcc--
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGT-KFRVIIVDGSPWYE-GKE-M-----------L---RRLVKHQVDCSYVLL-- 584 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk-~FrVIVvESRP~~E-Gr~-l-----------A---~~L~~~GI~vTyI~D-- 584 (717)
.+.+||+.|-+..|-..|.. ..+.+. ..+|+++.-++..+ +.. + . ..+...++.+...-.
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~ 151 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE 151 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence 56789999887766555543 344422 35788776554322 111 1 0 111113443333222
Q ss_pred -------hHHHHHhhhccEEEEceeeEecC----CCeecccchHHHHHHHHhCCC-cEEeccc
Q psy17541 585 -------SAVSYIMREVSKVIIGAHALLSN----GAVMSRAGTAQVSLVARAFNV-PVLAACE 635 (717)
Q Consensus 585 -------SAVsyiM~~VdkVLLGAdaVlaN----G~VvNKiGT~~VALaAK~~~V-PVyV~cE 635 (717)
..+..++.++|.||--|-.+-.+ ..-+|-.||..++-+|..+++ +|+.+.-
T Consensus 152 ~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS 214 (478)
T 4dqv_A 152 PDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVST 214 (478)
T ss_dssp GGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEE
T ss_pred cccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEee
Confidence 24667778888887655332111 111477899999999999997 4444433
No 287
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=36.86 E-value=84 Score=30.31 Aligned_cols=106 Identities=11% Similarity=0.124 Sum_probs=66.0
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh------
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR------ 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~------ 592 (717)
.|.+||+-|-|+-+-..|.. ..+.| .+|++++.+.......++..|...|..+.++. | .++..++.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEG--YNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35678888887766555544 34445 57888877766666778888988888877653 2 23444444
Q ss_pred -hccEEEEceeeEecCCCe-------------ecccchHHHHHHH----HhCCCcEEec
Q psy17541 593 -EVSKVIIGAHALLSNGAV-------------MSRAGTAQVSLVA----RAFNVPVLAA 633 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~V-------------vNKiGT~~VALaA----K~~~VPVyV~ 633 (717)
++|.||--|- +...+.+ +|-.|++.+.-.+ +..+...+|.
T Consensus 81 g~id~lv~nAg-~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~ 138 (246)
T 3osu_A 81 GSLDVLVNNAG-ITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIIN 138 (246)
T ss_dssp SCCCEEEECCC-CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCEEEECCC-CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5788777663 3322321 3677888877666 3344444443
No 288
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=36.84 E-value=78 Score=31.20 Aligned_cols=100 Identities=9% Similarity=0.076 Sum_probs=49.6
Q ss_pred CCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhh--ccEEEEcee
Q psy17541 526 DDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMRE--VSKVIIGAH 602 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~--VdkVLLGAd 602 (717)
|.+||+.|-+.-|-..|.. +.+.| ++|++++-++...+ -+.+-+....++..++.. +|.||--|-
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~----------~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 69 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN--WHAVGCGFRRARPK----------FEQVNLLDSNAVHHIIHDFQPHVIVHCAA 69 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT--CEEEEEC----------------------------CHHHHHHHCCSEEEECC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC--CeEEEEccCCCCCC----------eEEecCCCHHHHHHHHHhhCCCEEEECCc
Confidence 4578888888777665554 44445 67777763322111 111222222344455554 788776653
Q ss_pred eEecC--------CCeecccchHHHHHHHHhCCCcEEecccCC
Q psy17541 603 ALLSN--------GAVMSRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 603 aVlaN--------G~VvNKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
....+ -.-+|-.||..++-+|...++.|+.++...
T Consensus 70 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~ 112 (315)
T 2ydy_A 70 ERRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDY 112 (315)
T ss_dssp ------------------CHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred ccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHH
Confidence 32111 112477899999999998888776665443
No 289
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=36.79 E-value=72 Score=29.65 Aligned_cols=100 Identities=12% Similarity=0.057 Sum_probs=58.0
Q ss_pred eEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--chHHHHHhhhccEEEEceeeE
Q psy17541 528 VILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--LSAVSYIMREVSKVIIGAHAL 604 (717)
Q Consensus 528 vILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--DSAVsyiM~~VdkVLLGAdaV 604 (717)
.||+.|-++-|-..|. .+.+.| ++|+++.-++. -+..|...++.+...- |... ..+..+|.||--|-..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~-----~~~~~~~~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRG--HEVLAVVRDPQ-----KAADRLGATVATLVKEPLVLTE-ADLDSVDAVVDALSVP 73 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHH-----HHHHHTCTTSEEEECCGGGCCH-HHHTTCSEEEECCCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCC--CEEEEEEeccc-----ccccccCCCceEEecccccccH-hhcccCCEEEECCccC
Confidence 4788888776655544 444555 46666644332 1234444566543322 2222 5667777777655332
Q ss_pred e-cCCCeecccchHHHHHHHHhCCCcEEeccc
Q psy17541 605 L-SNGAVMSRAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 605 l-aNG~VvNKiGT~~VALaAK~~~VPVyV~cE 635 (717)
. ....-.|..|+..+.-+|+..+..|++++.
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred CCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 1 112234888999999999999977776653
No 290
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=36.79 E-value=2.5e+02 Score=30.24 Aligned_cols=141 Identities=18% Similarity=0.178 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--CeEEEecCch----HHHHHHHH----HHHcCCeeE-EEEcCCCCc
Q psy17541 494 LRLKEVIATYIHEQVDMAGNAICMFFHNKLAND--DVILTYGCSS----LVEKILLT----AHEKGTKFR-VIIVDGSPW 562 (717)
Q Consensus 494 e~Lie~IdefI~ErI~~A~e~Ia~~A~e~I~dG--dvILTyg~SS----tV~~vL~~----A~e~Gk~Fr-VIVvESRP~ 562 (717)
+.+......|. ..|..........+.++|.+= +.|+. |++. -+..+|.. +......-+ +|+-.|.-+
T Consensus 200 e~~~~~~~~yy-~~i~~p~~~~v~~~L~kl~~Ldi~~I~P-~HGpi~r~~~~~ii~~Y~~w~~~~~~~~~v~I~Y~S~yG 277 (410)
T 4dik_A 200 ERYLPHVTKYI-VTVIGHYKNYILEGAEKLSSLKIKALLP-GHGLIWKKDPQRLLNHYVSVAKGDPKKGKVTVIYDSMYG 277 (410)
T ss_dssp HHHHHHHHHHH-HHHHGGGHHHHHHHHHHHHTSCCSEEEE-SSSCBBSSCHHHHHHHHHHHHHTCCCTTEEEEEEECSSS
T ss_pred HHHHHHHHHHH-HhhccchHHHHHHHHHHHhCCCCCEEec-CCcchhhcCHHHHHHHHHHhhcccccccceeeEEecccC
Confidence 34444555555 334433444445555555432 33332 2222 13444432 221212223 455566655
Q ss_pred hhH---HHHHHHHHhCCCcEEEE--cc---hHHHHHhh---hccEEEEceeeEecCCCeecccchHHHHHHHHhC-CCcE
Q psy17541 563 YEG---KEMLRRLVKHQVDCSYV--LL---SAVSYIMR---EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAF-NVPV 630 (717)
Q Consensus 563 ~EG---r~lA~~L~~~GI~vTyI--~D---SAVsyiM~---~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~-~VPV 630 (717)
+-- ..+++.|.+.|+++.++ .| +.++.++. +++.++||+-.+ ||++.-.+-....-+.+..+ |+++
T Consensus 278 nTe~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGspT~--~~~~~p~~~~~l~~l~~~~~~~K~~ 355 (410)
T 4dik_A 278 FVENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVSTY--EAEIHPLMRFTLLEIIDKANYEKPV 355 (410)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEECCT--TSSSCHHHHHHHHHHHHHCCCCCEE
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEeccCCCCCHHHHHHHHHhCCeEEEEeCCc--CCcCCHHHHHHHHHHHhcccCCCEE
Confidence 443 35677788899998754 33 23677765 689999999887 67888877777666777665 5555
Q ss_pred EecccCCcc
Q psy17541 631 LAACETHKF 639 (717)
Q Consensus 631 yV~cEtyKF 639 (717)
. +.++|=.
T Consensus 356 ~-~FGSyGW 363 (410)
T 4dik_A 356 L-VFGVHGW 363 (410)
T ss_dssp E-EEEECCC
T ss_pred E-EEECCCC
Confidence 4 4556643
No 291
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=36.70 E-value=1.2e+02 Score=31.98 Aligned_cols=96 Identities=16% Similarity=0.241 Sum_probs=52.1
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHH-HH-HHhCCCcEEEEcchHHH---HHhh-hccEEEE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EML-RR-LVKHQVDCSYVLLSAVS---YIMR-EVSKVII 599 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA-~~-L~~~GI~vTyI~DSAVs---yiM~-~VdkVLL 599 (717)
+.|++-+-+..+.. +......|. +|++. .|.+.|. .++ .. +...|+.+.++....+. ..+. ++..|++
T Consensus 84 ~~~~~~sG~~Ai~~-~~~l~~~gd--~Vi~~--~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~ 158 (400)
T 3nmy_A 84 RAFAFASGMAATST-VMELLDAGS--HVVAM--DDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWI 158 (400)
T ss_dssp EEEEESSHHHHHHH-HHTTSCTTC--EEEEE--SSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTTEEEEEE
T ss_pred CEEEecCHHHHHHH-HHHHcCCCC--EEEEe--CCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccCCCEEEE
Confidence 34554444444443 332223333 45554 3666653 333 33 56679999998744333 3333 3444444
Q ss_pred ceeeEe-cCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 600 GAHALL-SNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 600 GAdaVl-aNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+.+. ..|.++. -..|+-+|++||++++|
T Consensus 159 --e~~~np~G~~~~---l~~i~~la~~~g~~liv 187 (400)
T 3nmy_A 159 --ETPTNPMLKLVD---IAAIAVIARKHGLLTVV 187 (400)
T ss_dssp --ESSCTTTCCCCC---HHHHHHHHHHTTCEEEE
T ss_pred --ECCCCCCCeeec---HHHHHHHHHHcCCEEEE
Confidence 3333 2344443 45678889999998887
No 292
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=36.66 E-value=1.6e+02 Score=29.24 Aligned_cols=90 Identities=12% Similarity=0.106 Sum_probs=51.1
Q ss_pred CeEEEecCc---hHHHHHHHHHHHc-CCeeEE-EEcCCCCchhHHHHHHHHHhCCC-cEEEEcc-hHHHHHhhhccEEEE
Q psy17541 527 DVILTYGCS---SLVEKILLTAHEK-GTKFRV-IIVDGSPWYEGKEMLRRLVKHQV-DCSYVLL-SAVSYIMREVSKVII 599 (717)
Q Consensus 527 dvILTyg~S---StV~~vL~~A~e~-Gk~FrV-IVvESRP~~EGr~lA~~L~~~GI-~vTyI~D-SAVsyiM~~VdkVLL 599 (717)
.+|+.++.+ .-...+|..|... ...+++ +++-..+. ..+...+.+.|+ +|.+.-- ..+..+|..+|.+++
T Consensus 184 ~~il~~~g~~~~~k~~~~li~a~~~l~~~~~~l~i~G~~~~---~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v~ 260 (364)
T 1f0k_A 184 VRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQSGKGSQ---QSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVC 260 (364)
T ss_dssp EEEEEECTTTCCHHHHHHHHHHHHHHGGGEEEEEECCTTCH---HHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEE
T ss_pred cEEEEEcCchHhHHHHHHHHHHHHHhcCCcEEEEEcCCchH---HHHHHHHhhcCCCceEEecchhhHHHHHHhCCEEEE
Confidence 356666532 1223444444432 115673 44544442 234444455665 4555442 467888999999887
Q ss_pred ceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 600 GAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 600 GAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
.+ | ....+=|-.+|+||++.
T Consensus 261 ~s------g--------~~~~~EAma~G~Pvi~~ 280 (364)
T 1f0k_A 261 RS------G--------ALTVSEIAAAGLPALFV 280 (364)
T ss_dssp CC------C--------HHHHHHHHHHTCCEEEC
T ss_pred CC------c--------hHHHHHHHHhCCCEEEe
Confidence 53 3 34556677789999986
No 293
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=36.59 E-value=99 Score=31.64 Aligned_cols=54 Identities=20% Similarity=0.220 Sum_probs=34.8
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
.+..|++||++|.+.+=..++..|+..|- +|++++..+.. +.+ +.+.|.+..+-
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~--~~~---~~~lGa~~~~~ 218 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGA--FVVCTARSPRR--LEV---AKNCGADVTLV 218 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHH--HHH---HHHTTCSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEcCCHHH--HHH---HHHhCCCEEEc
Confidence 47889999999976543445555665665 48888876432 233 34568775543
No 294
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=36.56 E-value=1e+02 Score=26.66 Aligned_cols=81 Identities=12% Similarity=0.128 Sum_probs=48.0
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHHh-
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--VSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA- 625 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--VsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~- 625 (717)
+..+|+|+|..|... ..+...|...|+.|....+.. +..+-. ..|.||+..+. .+ .-|-..+..+...
T Consensus 6 ~~~~iLivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~ 77 (154)
T 2rjn_A 6 KNYTVMLVDDEQPIL-NSLKRLIKRLGCNIITFTSPLDALEALKGTSVQLVISDMRM--PE-----MGGEVFLEQVAKSY 77 (154)
T ss_dssp SCCEEEEECSCHHHH-HHHHHHHHTTTCEEEEESCHHHHHHHHTTSCCSEEEEESSC--SS-----SCHHHHHHHHHHHC
T ss_pred CCCeEEEEcCCHHHH-HHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEecCC--CC-----CCHHHHHHHHHHhC
Confidence 456788888776442 345666777888887665432 233322 47888887542 22 1233334444333
Q ss_pred CCCcEEecccCCc
Q psy17541 626 FNVPVLAACETHK 638 (717)
Q Consensus 626 ~~VPVyV~cEtyK 638 (717)
.++||++++....
T Consensus 78 ~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 78 PDIERVVISGYAD 90 (154)
T ss_dssp TTSEEEEEECGGG
T ss_pred CCCcEEEEecCCC
Confidence 4799999876543
No 295
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=36.55 E-value=51 Score=33.32 Aligned_cols=94 Identities=17% Similarity=0.140 Sum_probs=49.7
Q ss_pred CeEEEecCchHHHHHHHHH-HHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch---------HHHHHhhhccE
Q psy17541 527 DVILTYGCSSLVEKILLTA-HEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS---------AVSYIMREVSK 596 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A-~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS---------AVsyiM~~Vdk 596 (717)
.+|+|-|-+..+..+|..+ ...|. +|++. .|.+.+.. ..+...|+.+.++... ++-..+.+-.+
T Consensus 53 ~~i~~~sgt~al~~~l~~l~~~~gd--~Vi~~--~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 126 (373)
T 3frk_A 53 YCIGCGNGLDALHLILKGYDIGFGD--EVIVP--SNTFIATA--LAVSYTGAKPIFVEPDIRTYNIDPSLIESAITEKTK 126 (373)
T ss_dssp EEEEESCHHHHHHHHHHHTTCCTTC--EEEEE--TTSCTHHH--HHHHHHSCEEEEECEETTTTEECGGGTGGGCCTTEE
T ss_pred eEEEeCCHHHHHHHHHHHcCCCCcC--EEEEC--CCCcHHHH--HHHHHcCCEEEEEeccccccCcCHHHHHHhcCCCCe
Confidence 5677766666655555544 33333 45553 35555532 3345568888877633 12222222223
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+|+ ..-..|.+.. --.|+-+|+.+|++|+|
T Consensus 127 ~v~---~~n~~G~~~~---l~~i~~l~~~~~~~li~ 156 (373)
T 3frk_A 127 AII---AVHLYGQPAD---MDEIKRIAKKYNLKLIE 156 (373)
T ss_dssp EEE---EECCTTCCCC---HHHHHHHHHHHTCEEEE
T ss_pred EEE---EECCCcCccc---HHHHHHHHHHcCCEEEE
Confidence 333 1123343221 24677888999998887
No 296
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=36.52 E-value=2.3e+02 Score=30.98 Aligned_cols=21 Identities=29% Similarity=0.240 Sum_probs=17.2
Q ss_pred ccCCCCccEEEeCCCCcCCCC
Q psy17541 684 ITPSHLVTAVITELAIVPCTS 704 (717)
Q Consensus 684 vTPPeLIT~IITE~GIlpPsS 704 (717)
.||-+.|+.||||.|+.....
T Consensus 383 ~~~~~~v~~vVTE~Gva~L~G 403 (434)
T 3eh7_A 383 TTLRNEVDYVVTEYGIAQLKG 403 (434)
T ss_dssp EECTTTCCEEEETTEEEECTT
T ss_pred eeCccceeEEEcccEEEECCC
Confidence 467788999999999987643
No 297
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=36.50 E-value=1e+02 Score=31.98 Aligned_cols=99 Identities=7% Similarity=-0.020 Sum_probs=58.6
Q ss_pred CeEEEec-CchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCc--EEEEc-chHHHHHhhhccEEEEcee
Q psy17541 527 DVILTYG-CSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVD--CSYVL-LSAVSYIMREVSKVIIGAH 602 (717)
Q Consensus 527 dvILTyg-~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~--vTyI~-DSAVsyiM~~VdkVLLGAd 602 (717)
..|++.| .+.+-..++......|.-.+|+++|-.+. +|. +..|.....+ +..+. .......+..+|.||+-|-
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~--~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGV--TADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHH--HHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhH--HHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 4688888 44433333333444565457888886665 443 4566654444 33322 2355667899999999886
Q ss_pred eEecCCC------eecccchHHHHHHHHhCCC
Q psy17541 603 ALLSNGA------VMSRAGTAQVSLVARAFNV 628 (717)
Q Consensus 603 aVlaNG~------VvNKiGT~~VALaAK~~~V 628 (717)
.-...|. -.|--|+..++-.+..++.
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p 117 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCP 117 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 5444442 2444677778777776653
No 298
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=36.41 E-value=2.7e+02 Score=29.89 Aligned_cols=100 Identities=11% Similarity=-0.013 Sum_probs=55.6
Q ss_pred CCCeEEEecCchHHHHHHHHHHH--------cCC----eeEEEEcCC-CCchhHHHHHHHHHhCCC---cEEEEcch---
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHE--------KGT----KFRVIIVDG-SPWYEGKEMLRRLVKHQV---DCSYVLLS--- 585 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e--------~Gk----~FrVIVvES-RP~~EGr~lA~~L~~~GI---~vTyI~DS--- 585 (717)
.+++++|-|-|..+...|..+.. .|. +..|++.+. -|... . + +.-.|+ .+..|+..
T Consensus 165 ~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~--~-~--~~~~g~g~~~v~~v~~~~~~ 239 (515)
T 2jis_A 165 SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQ--K-G--AAFLGLGTDSVRVVKADERG 239 (515)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH--H-H--HHHTTSCGGGEEEECBCTTS
T ss_pred CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHH--H-H--HHHcCCCCCcEEEEecCCCC
Confidence 45688888888776666666531 352 457777663 23222 2 2 222355 78877632
Q ss_pred -----HHHHHhhh------ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 586 -----AVSYIMRE------VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 586 -----AVsyiM~~------VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++-..+.+ ..++|+....-...|.+. . -..|+-+|+++|++|+|
T Consensus 240 ~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~-~--l~~I~~la~~~g~~l~v 294 (515)
T 2jis_A 240 KMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD-P--LEAIADVCQRHGLWLHV 294 (515)
T ss_dssp CBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC-C--HHHHHHHHHHHTCEEEE
T ss_pred cCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCcc-C--HHHHHHHHHHcCCeEEE
Confidence 33334433 134444332222334443 3 24688889999999987
No 299
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=36.31 E-value=3.5e+02 Score=27.29 Aligned_cols=72 Identities=4% Similarity=-0.062 Sum_probs=40.8
Q ss_pred EEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch---HHHHHhh-----hccEEEEceeeEecCCCeecccchHHHHHHHH
Q psy17541 553 RVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS---AVSYIMR-----EVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR 624 (717)
Q Consensus 553 rVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS---AVsyiM~-----~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK 624 (717)
.|++.+ |.+.+...+ +...|+.+.++... .+-.++. ++..|++ .+.-...|.++. --.|+-+|+
T Consensus 134 ~Vl~~~--~~~~~~~~~--~~~~g~~~~~v~~~d~~~le~~l~~~~~~~~~~v~~-~~~~nptG~~~~---l~~i~~l~~ 205 (401)
T 2bwn_A 134 IIYSDS--LNHASMIEG--IKRNAGPKRIFRHNDVAHLRELIAADDPAAPKLIAF-ESVYSMDGDFGP---IKEICDIAE 205 (401)
T ss_dssp EEEEET--TCCHHHHHH--HHHSCCCEEEECTTCHHHHHHHHHHSCTTSCEEEEE-ESBCTTTCCBCC---HHHHHHHHH
T ss_pred EEEECc--hhhHHHHHH--HHHcCCeEEEEcCCCHHHHHHHHHhhccCCceEEEE-ecCcCCCCCcCC---HHHHHHHHH
Confidence 455543 666654333 34479999888743 3444444 2333333 222223455554 356788899
Q ss_pred hCCCcEEe
Q psy17541 625 AFNVPVLA 632 (717)
Q Consensus 625 ~~~VPVyV 632 (717)
+|+++|+|
T Consensus 206 ~~~~~li~ 213 (401)
T 2bwn_A 206 EFGALTYI 213 (401)
T ss_dssp HHTCEEEE
T ss_pred HcCCEEEE
Confidence 99988776
No 300
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=36.27 E-value=1e+02 Score=31.41 Aligned_cols=109 Identities=10% Similarity=0.056 Sum_probs=57.0
Q ss_pred CCeEEEecCchHHHHHHH-HHH-HcCCeeEEEEcCCCCchh--------HHHHHHHHHhC-C----Cc---EEEE-cc--
Q psy17541 526 DDVILTYGCSSLVEKILL-TAH-EKGTKFRVIIVDGSPWYE--------GKEMLRRLVKH-Q----VD---CSYV-LL-- 584 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~-~A~-e~Gk~FrVIVvESRP~~E--------Gr~lA~~L~~~-G----I~---vTyI-~D-- 584 (717)
+.+||+.|-+.-|-..|. .+. +.| .+|++++-++... -..+...|.+. + -. +.++ .|
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~ 79 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTN--HSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR 79 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCC--CEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCC--CEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence 347888887776655444 344 455 5777775443321 12232223322 1 02 3333 23
Q ss_pred --hHHHHHhh--h-ccEEEEceeeEecCC--------CeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 585 --SAVSYIMR--E-VSKVIIGAHALLSNG--------AVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 585 --SAVsyiM~--~-VdkVLLGAdaVlaNG--------~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
.++..++. . +|.||--|-...... .-+|-.||..+.-+|+..++.-+|...+
T Consensus 80 d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS 144 (397)
T 1gy8_A 80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS 144 (397)
T ss_dssp CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECC
Confidence 34555666 3 676665553221100 0135679999999999888865554443
No 301
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=36.26 E-value=90 Score=26.62 Aligned_cols=82 Identities=16% Similarity=0.188 Sum_probs=49.8
Q ss_pred CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHH-
Q psy17541 549 GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--VSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR- 624 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--VsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK- 624 (717)
....+|+|+|..|... ..+...|...|+.|....+.. +..+-. ..|.||+..+. .+ .-|--.+..+-.
T Consensus 6 ~~~~~iLivd~~~~~~-~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l--~~-----~~g~~~~~~l~~~ 77 (147)
T 2zay_A 6 GKWWRIMLVDTQLPAL-AASISALSQEGFDIIQCGNAIEAVPVAVKTHPHLIITEANM--PK-----ISGMDLFNSLKKN 77 (147)
T ss_dssp --CEEEEEECTTGGGG-HHHHHHHHHHTEEEEEESSHHHHHHHHHHHCCSEEEEESCC--SS-----SCHHHHHHHHHTS
T ss_pred CCCceEEEEeCCHHHH-HHHHHHHHHcCCeEEEeCCHHHHHHHHHcCCCCEEEEcCCC--CC-----CCHHHHHHHHHcC
Confidence 4567899998877543 345666777898888666433 222222 48999987643 22 123333444443
Q ss_pred --hCCCcEEecccCCc
Q psy17541 625 --AFNVPVLAACETHK 638 (717)
Q Consensus 625 --~~~VPVyV~cEtyK 638 (717)
..++||++++....
T Consensus 78 ~~~~~~pii~ls~~~~ 93 (147)
T 2zay_A 78 PQTASIPVIALSGRAT 93 (147)
T ss_dssp TTTTTSCEEEEESSCC
T ss_pred cccCCCCEEEEeCCCC
Confidence 45799999987654
No 302
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=36.22 E-value=88 Score=31.17 Aligned_cols=94 Identities=11% Similarity=0.193 Sum_probs=51.0
Q ss_pred CeEEEecCchHHHHHHHHH---HHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------HHHHHhhhcc
Q psy17541 527 DVILTYGCSSLVEKILLTA---HEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS--------AVSYIMREVS 595 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A---~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS--------AVsyiM~~Vd 595 (717)
.+++|.|-+..+..+|..+ ...|. +|++. .|.+.+...+ +...|+.+.++... .+-..+.+-.
T Consensus 49 ~v~~~~ggt~al~~~~~~~~~~~~~gd--~Vl~~--~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~ 122 (375)
T 2fnu_A 49 HALVFNSATSALLTLYRNFSEFSADRN--EIITT--PISFVATANM--LLESGYTPVFAGIKNDGNIDELALEKLINERT 122 (375)
T ss_dssp EEEEESCHHHHHHHHHHHSSCCCTTSC--EEEEC--SSSCTHHHHH--HHHTTCEEEECCBCTTSSBCGGGSGGGCCTTE
T ss_pred eEEEeCCHHHHHHHHHHHhcccCCCCC--EEEEC--CCccHhHHHH--HHHCCCEEEEeccCCCCCCCHHHHHhhcCcCc
Confidence 5677777666666665554 33332 56653 4666665433 33478888877532 1111222112
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
++|+-.+. .|.+.. -..|+-+|+.||++|+|
T Consensus 123 ~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~li~ 153 (375)
T 2fnu_A 123 KAIVSVDY---AGKSVE---VESVQKLCKKHSLSFLS 153 (375)
T ss_dssp EEEEEECG---GGCCCC---HHHHHHHHHHHTCEEEE
T ss_pred eEEEEeCC---cCCccC---HHHHHHHHHHcCCEEEE
Confidence 33332222 454433 25677888899998876
No 303
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=36.19 E-value=36 Score=29.28 Aligned_cols=81 Identities=9% Similarity=0.029 Sum_probs=49.2
Q ss_pred CCeeEEEEcCCCCchhHHHHHHHHHhCC-CcEEEEcchHHH--HHh---hhccEEEEceeeEecCCCeecccchHHHHHH
Q psy17541 549 GTKFRVIIVDGSPWYEGKEMLRRLVKHQ-VDCSYVLLSAVS--YIM---REVSKVIIGAHALLSNGAVMSRAGTAQVSLV 622 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr~lA~~L~~~G-I~vTyI~DSAVs--yiM---~~VdkVLLGAdaVlaNG~VvNKiGT~~VALa 622 (717)
....+|+|+|..|... ..+...|...| +.|....+..-+ .+. ...|.||+..+- .+ .-|-..+..+
T Consensus 18 ~~~~~ilivdd~~~~~-~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~dlvi~D~~l--~~-----~~g~~~~~~l 89 (146)
T 4dad_A 18 QGMINILVASEDASRL-AHLARLVGDAGRYRVTRTVGRAAQIVQRTDGLDAFDILMIDGAA--LD-----TAELAAIEKL 89 (146)
T ss_dssp GGGCEEEEECSCHHHH-HHHHHHHHHHCSCEEEEECCCHHHHTTCHHHHTTCSEEEEECTT--CC-----HHHHHHHHHH
T ss_pred CCCCeEEEEeCCHHHH-HHHHHHHhhCCCeEEEEeCCHHHHHHHHHhcCCCCCEEEEeCCC--CC-----ccHHHHHHHH
Confidence 3457888888877543 34566677778 888887765422 222 457899886542 22 2233333333
Q ss_pred H-HhCCCcEEecccCC
Q psy17541 623 A-RAFNVPVLAACETH 637 (717)
Q Consensus 623 A-K~~~VPVyV~cEty 637 (717)
- ...++||++++...
T Consensus 90 ~~~~~~~~ii~lt~~~ 105 (146)
T 4dad_A 90 SRLHPGLTCLLVTTDA 105 (146)
T ss_dssp HHHCTTCEEEEEESCC
T ss_pred HHhCCCCcEEEEeCCC
Confidence 3 33479999988754
No 304
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=36.19 E-value=95 Score=30.23 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=57.9
Q ss_pred eEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhh-----ccEEEEce
Q psy17541 528 VILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMRE-----VSKVIIGA 601 (717)
Q Consensus 528 vILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~-----VdkVLLGA 601 (717)
+||+.|-+..|-..|.. +.+.| ..+|+++...+.... ...|....+.+-+-....+..++.. +|.||--|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTK---FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEG 76 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT-CCCEEEEECCSSGGG---GHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCC-CcEEEEEccCCCCch---hhhcCcceeccccccHHHHHHHHhccccCCCcEEEECc
Confidence 37777887766555554 44445 146666654443211 1122222255555444566677764 88887655
Q ss_pred eeEecC-CC-----eecccchHHHHHHHHhCCCcEEeccc
Q psy17541 602 HALLSN-GA-----VMSRAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 602 daVlaN-G~-----VvNKiGT~~VALaAK~~~VPVyV~cE 635 (717)
-..... .. -+|-.||..+.-+|+.+++.|+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS 116 (310)
T 1eq2_A 77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 116 (310)
T ss_dssp SCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred ccccCcccCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEee
Confidence 322110 00 13667899999889888886555543
No 305
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=36.14 E-value=73 Score=30.78 Aligned_cols=50 Identities=14% Similarity=0.178 Sum_probs=35.5
Q ss_pred HHHHHHcCCeeEEEEcCCCCchhH--HHHHHHHHhCCCcEEEEc-chHHHHHhh
Q psy17541 542 LLTAHEKGTKFRVIIVDGSPWYEG--KEMLRRLVKHQVDCSYVL-LSAVSYIMR 592 (717)
Q Consensus 542 L~~A~e~Gk~FrVIVvESRP~~EG--r~lA~~L~~~GI~vTyI~-DSAVsyiM~ 592 (717)
|....++|+++ |+++.+-|.+-| ..+++.|.+.||++.+|+ .+++.++..
T Consensus 87 i~~~~~~g~~V-~~l~~GDP~i~~~~~~l~~~~~~~gi~v~viPGiSs~~aa~a 139 (232)
T 2qbu_A 87 VAAELEDGRDV-AFITLGDPSIYSTFSYLQQRIEDMGFKTEMVPGVTSFTACAA 139 (232)
T ss_dssp HHHHHHTTCCE-EEEESBCTTBSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHH
T ss_pred HHHHHHCCCeE-EEEeCCCCccchhHHHHHHHHHHCCCcEEEeCCccHHHHHHH
Confidence 33344466664 556668898754 678889999999999999 666666654
No 306
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=36.13 E-value=23 Score=37.09 Aligned_cols=71 Identities=14% Similarity=0.114 Sum_probs=46.5
Q ss_pred ccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc----hHHHHHhhhccEEE
Q psy17541 523 LANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL----SAVSYIMREVSKVI 598 (717)
Q Consensus 523 I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D----SAVsyiM~~VdkVL 598 (717)
+..|.+|+..|.+..-..++..|++.| ++|+++|..|...+..++ +-.++.+ .++..+..++|.|.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa~~lG--~~viv~d~~~~~p~~~~a--------d~~~~~~~~d~~~l~~~~~~~dvi~ 78 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSAQKMG--YKVVVLDPSEDCPCRYVA--------HEFIQAKYDDEKALNQLGQKCDVIT 78 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCTTCTTGGGS--------SEEEECCTTCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCChhhhhC--------CEEEECCCCCHHHHHHHHHhCCcce
Confidence 557889999999998888888887766 578888877765433221 1122221 34555566788777
Q ss_pred Eceee
Q psy17541 599 IGAHA 603 (717)
Q Consensus 599 LGAda 603 (717)
.|-+.
T Consensus 79 ~~~E~ 83 (377)
T 3orq_A 79 YEFEN 83 (377)
T ss_dssp ESSTT
T ss_pred ecccc
Confidence 76543
No 307
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=36.10 E-value=2e+02 Score=33.18 Aligned_cols=104 Identities=17% Similarity=0.158 Sum_probs=67.8
Q ss_pred HhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCC--------------chhH----HHHHHHHHhC--CCcE
Q psy17541 520 HNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSP--------------WYEG----KEMLRRLVKH--QVDC 579 (717)
Q Consensus 520 ~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP--------------~~EG----r~lA~~L~~~--GI~v 579 (717)
.+.|. +..||..|.+.+=-.++......|.. ++.++|... ..-| ..++++|.+. ++.+
T Consensus 321 ~ekL~-~arVLIVGaGGLGs~vA~~La~aGVG-~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v 398 (615)
T 4gsl_A 321 LDIIK-NTKVLLLGAGTLGCYVSRALIAWGVR-KITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDA 398 (615)
T ss_dssp HHHHH-TCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEE
T ss_pred HHHHh-CCeEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEE
Confidence 33443 36899999988766666666666754 445545322 1113 2466677764 5666
Q ss_pred EEEcc-------------------hHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 580 SYVLL-------------------SAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 580 TyI~D-------------------SAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
+.+.. ..+..++..+|.||.+.|..-. -+.+..+|..+++|++-++
T Consensus 399 ~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~t---------R~~ln~~c~~~~~PlI~aa 463 (615)
T 4gsl_A 399 TGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES---------RWLPSLLSNIENKTVINAA 463 (615)
T ss_dssp EEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGG---------THHHHHHHHHTTCEEEEEE
T ss_pred EEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHH---------HHHHHHHHHHcCCeEEEEE
Confidence 66642 1345567889999988876532 3678899999999999764
No 308
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=36.09 E-value=76 Score=33.38 Aligned_cols=111 Identities=11% Similarity=0.013 Sum_probs=64.0
Q ss_pred CCCeEEEecCchHHHHHHHHHH-HcCCeeEEEEcCCCCchhHHHHHHHHHhC----CCcEEEEc----ch-HHHHHh--h
Q psy17541 525 NDDVILTYGCSSLVEKILLTAH-EKGTKFRVIIVDGSPWYEGKEMLRRLVKH----QVDCSYVL----LS-AVSYIM--R 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~-e~Gk~FrVIVvESRP~~EGr~lA~~L~~~----GI~vTyI~----DS-AVsyiM--~ 592 (717)
.|.+||+.|-+..+-..|.... +.| ..+|++++-.+. .-..+...|... +..+.++. |. .+..++ .
T Consensus 34 ~~k~vLVTGatG~IG~~l~~~L~~~g-~~~V~~~~r~~~-~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~ 111 (399)
T 3nzo_A 34 SQSRFLVLGGAGSIGQAVTKEIFKRN-PQKLHVVDISEN-NMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADG 111 (399)
T ss_dssp HTCEEEEETTTSHHHHHHHHHHHTTC-CSEEEEECSCHH-HHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCC
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCC-CCEEEEEECCcc-hHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhC
Confidence 3578999988877766665544 344 247777764332 123445555542 24455542 22 234444 3
Q ss_pred hccEEEEceeeEec----------CCCeecccchHHHHHHHHhCCCcEEecccCC
Q psy17541 593 EVSKVIIGAHALLS----------NGAVMSRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 593 ~VdkVLLGAdaVla----------NG~VvNKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
++|.||--|-.... ...-.|-.||..++-+|+.+++.-+|...|.
T Consensus 112 ~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~r~V~iSS~ 166 (399)
T 3nzo_A 112 QYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTD 166 (399)
T ss_dssp CCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 68887765422111 0112567899999999999998766655553
No 309
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=36.01 E-value=2.1e+02 Score=32.87 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=66.2
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcC------CCCchh--------H----HHHHHHHHhC--CCcEEEEcc-
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVD------GSPWYE--------G----KEMLRRLVKH--QVDCSYVLL- 584 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvE------SRP~~E--------G----r~lA~~L~~~--GI~vTyI~D- 584 (717)
+..||..|.+.+=-.++......|.. ++.++| |....+ | ..++++|.+. ++.++.+..
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG-~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~ 405 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVR-KITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLS 405 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCC-EEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCC-EEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 36899999998766777777667753 334443 222211 3 3567777763 577776652
Q ss_pred ------------------hHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 585 ------------------SAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 585 ------------------SAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
..+..++.++|.||.+.|.+-. -+.+..+|..+++|++..+
T Consensus 406 I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~t---------R~lin~~c~~~~~plI~aa 464 (598)
T 3vh1_A 406 IPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRES---------RWLPSLLSNIENKTVINAA 464 (598)
T ss_dssp CCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGG---------THHHHHHHHHTTCEEEEEE
T ss_pred ccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHH---------HHHHHHHHHhcCCCEEEEE
Confidence 2345567789999988776542 3778889999999999753
No 310
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=35.91 E-value=32 Score=34.30 Aligned_cols=102 Identities=15% Similarity=0.143 Sum_probs=58.8
Q ss_pred eEEEecCchHHHHHHH-HHHHcCCeeEEEEcCC--CCchhHHHHHHHHHhCC-CcEEEEcc----hHHHHHhhh--ccEE
Q psy17541 528 VILTYGCSSLVEKILL-TAHEKGTKFRVIIVDG--SPWYEGKEMLRRLVKHQ-VDCSYVLL----SAVSYIMRE--VSKV 597 (717)
Q Consensus 528 vILTyg~SStV~~vL~-~A~e~Gk~FrVIVvES--RP~~EGr~lA~~L~~~G-I~vTyI~D----SAVsyiM~~--VdkV 597 (717)
+||+.|-+.-|-..|. .+.+.| .+|++++- |+.. ...+..|...| +.+.. .| .++..++.. +|.|
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~l~~~~~~~~~~-~Dl~d~~~~~~~~~~~~~d~v 77 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALSQG--IDLIVFDNLSRKGA--TDNLHWLSSLGNFEFVH-GDIRNKNDVTRLITKYMPDSC 77 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCCSTTH--HHHHHHHHTTCCCEEEE-CCTTCHHHHHHHHHHHCCSEE
T ss_pred EEEEeCCCchhHHHHHHHHHhCC--CEEEEEeCCCccCc--hhhhhhhccCCceEEEE-cCCCCHHHHHHHHhccCCCEE
Confidence 6788887776655544 344455 56777653 3332 23345565544 43322 23 346667777 8888
Q ss_pred EEceeeEecC--------CCeecccchHHHHHHHHhCCCc--EEecc
Q psy17541 598 IIGAHALLSN--------GAVMSRAGTAQVSLVARAFNVP--VLAAC 634 (717)
Q Consensus 598 LLGAdaVlaN--------G~VvNKiGT~~VALaAK~~~VP--VyV~c 634 (717)
|--|-....+ -.-+|-.||..+.-+|+.++++ |+.++
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~S 124 (347)
T 1orr_A 78 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS 124 (347)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence 7665432110 0124678999999999998885 44443
No 311
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=35.89 E-value=47 Score=34.62 Aligned_cols=97 Identities=21% Similarity=0.243 Sum_probs=48.5
Q ss_pred EEEecCchHHHHHHHHH---HHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch-----------------H--
Q psy17541 529 ILTYGCSSLVEKILLTA---HEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-----------------A-- 586 (717)
Q Consensus 529 ILTyg~SStV~~vL~~A---~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-----------------A-- 586 (717)
|.|+|...-|..++.-| .+.|..++|+.. +. +...+...|+++.-+... .
T Consensus 5 i~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~---~~-----~~~~v~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3h4t_A 5 ITGCGSRGDTEPLVALAARLRELGADARMCLP---PD-----YVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVT 76 (404)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTTCCEEEEEC---GG-----GHHHHHHTTCCEEECSSCSSGGGSCTTCCCTTCGGGHH
T ss_pred EEeCCCCccHHHHHHHHHHHHHCCCeEEEEeC---HH-----HHHHHHHcCCceeecCCCHHHHhccccCCHHHHHHHHH
Confidence 55666666555554433 345765555542 22 233455678877666421 0
Q ss_pred --HHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 587 --VSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 587 --VsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
+...+.....++-++|.|+.+|.. .+....+++|...|||++.+.-+
T Consensus 77 ~~~~~~~~~l~~~~~~pD~Vi~~~~~---~~~~~a~~~A~~lgiP~v~~~~~ 125 (404)
T 3h4t_A 77 EVVAEWFDKVPAAIEGCDAVVTTGLL---PAAVAVRSMAEKLGIPYRYTVLS 125 (404)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECH---HHHHHHHHHHHHHTCCEEEEESS
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCch---hhhhhhhhHHhhcCCCEEEEEcC
Confidence 111111111111156666555431 11222367899999999976543
No 312
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=35.65 E-value=3e+02 Score=27.69 Aligned_cols=102 Identities=14% Similarity=0.160 Sum_probs=55.8
Q ss_pred CCeEEEecCchHHHHHHHHHHH-------cCCeeEEEEcCCCCchhHH-HHHHHHHh----------CCCcEEEEcchHH
Q psy17541 526 DDVILTYGCSSLVEKILLTAHE-------KGTKFRVIIVDGSPWYEGK-EMLRRLVK----------HQVDCSYVLLSAV 587 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e-------~Gk~FrVIVvESRP~~EGr-~lA~~L~~----------~GI~vTyI~DSAV 587 (717)
..+++|-|-+..+..+|..+.. .|+. +|++.+ |.+.|. ..+..+.. .+.++..++...+
T Consensus 97 ~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~-~vi~~~--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 173 (406)
T 4adb_A 97 DRVFFCNSGAEANEAALKLARKFAHDRYGSHKS-GIVAFK--NAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDI 173 (406)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCC-EEEEET--TCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCH
T ss_pred CeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCc-EEEEEC--CCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcH
Confidence 3678888777777777665543 3433 555543 344442 22222221 1234555532223
Q ss_pred HH---Hhh-hccEEEEceeeEecCCCee--cccchHHHHHHHHhCCCcEEe
Q psy17541 588 SY---IMR-EVSKVIIGAHALLSNGAVM--SRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 588 sy---iM~-~VdkVLLGAdaVlaNG~Vv--NKiGT~~VALaAK~~~VPVyV 632 (717)
.. .+. ++..|++- -+...|+++ ..-=-..|+-+|+.|+++|++
T Consensus 174 ~~l~~~l~~~~~~v~~~--p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~ 222 (406)
T 4adb_A 174 NSASALIDDSTCAVIVE--PIQGEGGVVPASNAFLQGLRELCNRHNALLIF 222 (406)
T ss_dssp HHHHTTCSTTEEEEEEC--SEETTTTSEECCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHhcCCeEEEEEe--CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 32 232 34445444 356677766 544456688889999998886
No 313
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=35.48 E-value=3.1e+02 Score=27.79 Aligned_cols=97 Identities=14% Similarity=0.143 Sum_probs=52.4
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHHHH-HhCCCcEEEEcch---HHHHHhh-hccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLRRL-VKHQVDCSYVLLS---AVSYIMR-EVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~~L-~~~GI~vTyI~DS---AVsyiM~-~VdkVLLG 600 (717)
+.|++-+-+..+..++..+...| -+|++.+ |.+.|. ...+.+ ...|+++.++... .+-..+. ++..|++-
T Consensus 69 ~~i~~~sGt~a~~~~~~~~~~~g--~~vl~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~ 144 (386)
T 1cs1_A 69 GAVLTNTGMSAIHLVTTVFLKPG--DLLVAPH--DCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVE 144 (386)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTT--CEEEEET--TCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhCCC--CEEEEec--CCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEe
Confidence 44444322555555554443333 3566654 666663 323333 5679999888642 3333333 45555553
Q ss_pred eeeEec-CCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALLS-NGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVla-NG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.+.. .|.+.. -..|+-+|+.+++.|+|
T Consensus 145 --~~~nptG~~~~---l~~i~~l~~~~~~~li~ 172 (386)
T 1cs1_A 145 --SPSNPLLRVVD---IAKICHLAREVGAVSVV 172 (386)
T ss_dssp --CSCTTTCCCCC---HHHHHHHHHHTTCEEEE
T ss_pred --CCCCCCCcccC---HHHHHHHHHHcCCEEEE
Confidence 2322 254442 35677889999998776
No 314
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=35.44 E-value=2.4e+02 Score=26.63 Aligned_cols=107 Identities=9% Similarity=0.039 Sum_probs=62.6
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh------
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR------ 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~------ 592 (717)
.|.+||+.|-|+-+-..|.. ..+.| .+|++++-++ .....++.+|...|-.+.++. | .++..++.
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G--~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAG--ASVVVSDINA-DAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTT--CEEEEEESCH-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEcCCH-HHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 46788888888776555544 34445 5788776543 233456777777776766653 3 34545554
Q ss_pred -hccEEEEceeeEecCCCe------------ecccchHHHHHHHH----hCCCcEEeccc
Q psy17541 593 -EVSKVIIGAHALLSNGAV------------MSRAGTAQVSLVAR----AFNVPVLAACE 635 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~V------------vNKiGT~~VALaAK----~~~VPVyV~cE 635 (717)
++|.||--|-.. ..+.+ +|-.|++.+.-.+. ..+...+|...
T Consensus 87 ~~~d~vi~~Ag~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~s 145 (255)
T 1fmc_A 87 GKVDILVNNAGGG-GPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTIT 145 (255)
T ss_dssp SSCCEEEECCCCC-CCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCCCEEEECCCCC-CCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 678887766322 22211 46678777766553 33555555433
No 315
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=35.43 E-value=81 Score=32.50 Aligned_cols=54 Identities=11% Similarity=0.054 Sum_probs=35.5
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
.+..|++||++|.+.+=..++..|+..|- +||+++..+.. +.+++. .|.+..+-
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga--~Vi~~~~~~~~--~~~~~~---lGa~~v~~ 229 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGA--ETYVISRSSRK--REDAMK---MGADHYIA 229 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSSTT--HHHHHH---HTCSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHH--HHHHHH---cCCCEEEc
Confidence 47789999999996544445556665665 69998876653 344444 57665443
No 316
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=35.41 E-value=60 Score=32.81 Aligned_cols=69 Identities=20% Similarity=0.228 Sum_probs=39.1
Q ss_pred hccCCCeEEEec-CchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch-H-HHHHhhhccEEE
Q psy17541 522 KLANDDVILTYG-CSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-A-VSYIMREVSKVI 598 (717)
Q Consensus 522 ~I~dGdvILTyg-~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-A-VsyiM~~VdkVL 598 (717)
.+..|++||++| .+.+=..++..|+..|- +||++.+ +. -+.+++ +.|.+..+-... . +...+..+|.||
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga--~vi~~~~-~~--~~~~~~---~lGa~~~i~~~~~~~~~~~~~g~D~v~ 220 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKGT--TVITTAS-KR--NHAFLK---ALGAEQCINYHEEDFLLAISTPVDAVI 220 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEEC-HH--HHHHHH---HHTCSEEEETTTSCHHHHCCSCEEEEE
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCC--EEEEEec-cc--hHHHHH---HcCCCEEEeCCCcchhhhhccCCCEEE
Confidence 478999999998 55543445555665665 6887764 22 134444 457775443322 1 333344455554
No 317
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=35.30 E-value=3e+02 Score=27.50 Aligned_cols=105 Identities=16% Similarity=0.230 Sum_probs=59.7
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEE-------EEcCCCCc------hhH---HHHHHHHHhCCCcEEEEcc------
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRV-------IIVDGSPW------YEG---KEMLRRLVKHQVDCSYVLL------ 584 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrV-------IVvESRP~------~EG---r~lA~~L~~~GI~vTyI~D------ 584 (717)
.+||+||....+...+... .....+.- -+++..++ .+| ..+...|.++|+++..++-
T Consensus 30 ~vViVhGgg~~~~~~~~~~-~~~~~~~~~~~g~~~rvt~~~~l~~~~~~~~G~i~~~l~~~l~~~G~~a~~l~~~d~~~~ 108 (269)
T 2egx_A 30 KLLLVHGGSAETNKVAEAL-GHPPRFLTHPGGQVSRLTDRKTLEIFEMVYCGLVNKRLVELLQKEGANAIGLSGLDGRLF 108 (269)
T ss_dssp CEEEECCCHHHHHHHHHHT-TCCCCC-------CCCCCCHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEETTGGGCE
T ss_pred eEEEEECChHHHHHHHHHc-CCccccccccCCccCcCCCHHHHHHHHHHHHhHHHHHHHHHHHHCCCCeEEeCCCCccce
Confidence 6999999998776554433 11111111 11221111 123 3456778889988774431
Q ss_pred --------------------------------hHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 585 --------------------------------SAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 585 --------------------------------SAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
..+-.++..-..+|+..-++-.+|.+.+--+=...|++|...+.-.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~D~g~~g~i~~v~~~~i~~ll~~g~ipVi~~v~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~li 188 (269)
T 2egx_A 109 VGRRKTAVKYVENGKVKVHRGDYTGTVEEVNKALLDLLLQAGYLPVLTPPALSYENEAINTDGDQIAALLATLYGAEALV 188 (269)
T ss_dssp EECBC----------------CCEECCCEECHHHHHHHHHTTCEEEEECCEEETTSCEEEECHHHHHHHHHHHHTCSEEE
T ss_pred eeeecccccccccccccCCcCCCCCCceEECHHHHHHHHHCCCEEEEcCcEECCCCCEEEeCHHHHHHHHHHHcCCCEEE
Confidence 234445555566777765566677776544445666888888876444
No 318
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=35.29 E-value=1.4e+02 Score=30.43 Aligned_cols=72 Identities=7% Similarity=0.111 Sum_probs=48.2
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhC--CCcEEEEcchHHHHHhhhccEEE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKH--QVDCSYVLLSAVSYIMREVSKVI 598 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~--GI~vTyI~DSAVsyiM~~VdkVL 598 (717)
.|.+||..|.+.+-..++..+.+.|-. +|+|+ +|-......+++.+... ++.+..+....+...+.++|.||
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~-~v~i~-~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVI 199 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQ-KLQVA-DLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVV 199 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCS-EEEEE-CSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCC-EEEEE-ECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEE
Confidence 467899999887766666666666642 45554 44444456777777765 45666666556777778888776
No 319
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=35.28 E-value=2.1e+02 Score=28.40 Aligned_cols=98 Identities=11% Similarity=0.186 Sum_probs=50.9
Q ss_pred CeEE-EecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------HHHHHhh-hccE
Q psy17541 527 DVIL-TYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS--------AVSYIMR-EVSK 596 (717)
Q Consensus 527 dvIL-Tyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS--------AVsyiM~-~Vdk 596 (717)
++|+ |-|-+..+..+|..+...|. +|++.+ |..-|..+...+...|+.+.++... .+-..+. ++..
T Consensus 72 ~~i~~~~ggt~al~~~~~~~~~~gd--~vi~~~--~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~ 147 (376)
T 3f0h_A 72 KAVFMTCSSTGSMEAVVMNCFTKKD--KVLVID--GGSFGHRFVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTG 147 (376)
T ss_dssp EEEEESSCHHHHHHHHHHHHCCTTC--CEEEEE--SSHHHHHHHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCE
T ss_pred eEEEEcCChhHHHHHHHHhccCCCC--eEEEEe--CChhhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceE
Confidence 4455 33334454445544433343 455543 2222344445566679888877532 1222222 3444
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++- ..=-..|.++. --.|+-+|+.|+++|++
T Consensus 148 v~~~-~~~nptG~~~~---l~~i~~l~~~~~~~li~ 179 (376)
T 3f0h_A 148 LLVN-VDETSTAVLYD---TMMIGEFCKKNNMFFVC 179 (376)
T ss_dssp EEEE-SEETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred EEEe-cccCCcceecC---HHHHHHHHHHcCCEEEE
Confidence 4432 22223455554 55688889999998887
No 320
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=35.03 E-value=3.4e+02 Score=26.67 Aligned_cols=98 Identities=14% Similarity=0.181 Sum_probs=52.6
Q ss_pred CeEEEecCchHHHHHHHHHH----HcCCeeEEEEcCCCCchhHH-HHHHHHHhCCCcEEEEcch--------HHHHHhhh
Q psy17541 527 DVILTYGCSSLVEKILLTAH----EKGTKFRVIIVDGSPWYEGK-EMLRRLVKHQVDCSYVLLS--------AVSYIMRE 593 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~----e~Gk~FrVIVvESRP~~EGr-~lA~~L~~~GI~vTyI~DS--------AVsyiM~~ 593 (717)
.+++|-|.+..+..++..+. ..|. +|++.+ |.+.+. ..+..+...|+.+.++... ++-..+.+
T Consensus 62 ~i~~~~g~~~a~~~~~~~~~~~~~~~gd--~vi~~~--~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~ 137 (382)
T 4hvk_A 62 TVVFTSGATEANNLAIIGYAMRNARKGK--HILVSA--VEHMSVINPAKFLQKQGFEVEYIPVGKYGEVDVSFIDQKLRD 137 (382)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHGGGCC--EEEEET--TCCHHHHHHHHHHHHTTCEEEEECBCTTSCBCHHHHHHHCCT
T ss_pred eEEEECCchHHHHHHHHHhhhhhcCCCC--EEEECC--CCcHHHHHHHHHHHhcCCEEEEeccCCCCCcCHHHHHHHhcc
Confidence 46777776666555555443 4443 555543 344443 3344556789999988743 23333332
Q ss_pred ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 594 VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 594 VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
-.++++=...-...|.+.. --.|+-+|+.|++ |+|
T Consensus 138 ~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~ 172 (382)
T 4hvk_A 138 DTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHI 172 (382)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEE
T ss_pred CceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEE
Confidence 2233332222223354443 2467778899998 655
No 321
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=34.98 E-value=73 Score=34.95 Aligned_cols=112 Identities=14% Similarity=0.109 Sum_probs=56.6
Q ss_pred HHHhhccCCCeEEEecCchH---HHHHHHHHHHcCCeeEEEEcCC-CC----------------chhHHHHHHHHHhCC-
Q psy17541 518 FFHNKLANDDVILTYGCSSL---VEKILLTAHEKGTKFRVIIVDG-SP----------------WYEGKEMLRRLVKHQ- 576 (717)
Q Consensus 518 ~A~e~I~dGdvILTyg~SSt---V~~vL~~A~e~Gk~FrVIVvES-RP----------------~~EGr~lA~~L~~~G- 576 (717)
.|..+|++||+|.+.|.... +...|....+.-+.++|+-.-+ .| ++.|- ..+.+...|
T Consensus 20 EAv~~IkdGd~V~~~g~~g~P~~L~~ALa~r~~~l~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~i~~G~ 98 (434)
T 3eh7_A 20 EAVKHIKNGERVALSHAAGVPQSCVDALVQQADLFQNVEIYHMLCLGEGKYMAPEMAPHFRHITNFVGG-NSRKAVEENR 98 (434)
T ss_dssp HHHTTCCTTCEEEECCGGGCCHHHHHHHHHSTTTC--CEEECCBCTTCC------------------------------C
T ss_pred HHHHhCCCcCEEEECCccCCHHHHHHHHHHhHhhcCCeEEEEeccCCchhhcChhhhCeEEEecCcCCH-HHHHHHHCCC
Confidence 34568999999999985543 3333332211224566663221 11 11221 122333334
Q ss_pred CcEEEEcchHHHHHhh----hccEEEEceeeEecCCCeecccch-HHHHHHHHhCCCcEEe
Q psy17541 577 VDCSYVLLSAVSYIMR----EVSKVIIGAHALLSNGAVMSRAGT-AQVSLVARAFNVPVLA 632 (717)
Q Consensus 577 I~vTyI~DSAVsyiM~----~VdkVLLGAdaVlaNG~VvNKiGT-~~VALaAK~~~VPVyV 632 (717)
+...-+..+.+..++. .+|.+|+.+...-.+|.+.- |+ ...+..+.....-|+|
T Consensus 99 ~~~~p~~ls~~~~~~~~g~~~~DVAli~as~~D~~Gn~s~--g~s~~~~~~~~~~A~~VI~ 157 (434)
T 3eh7_A 99 ADFIPVFFYEVPSMIRKDILHIDVAIVQLSMPDENGYCSF--GVSCDYSKPAAESAHLVIG 157 (434)
T ss_dssp TTCCCCCGGGHHHHHHTTSSCCSEEEEEECCCCTTSEEEC--TTBCTTHHHHHHHCSEEEE
T ss_pred ccccChhHHHHHHHHHhCCCCCcEEEEEEecCCCCCCEEe--cCccchHHHHHHhCCeEEE
Confidence 4443345677777775 48999999999999998864 43 2233333344444444
No 322
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=34.98 E-value=1.5e+02 Score=30.43 Aligned_cols=97 Identities=15% Similarity=0.131 Sum_probs=53.8
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHHHHH-HhCCCcEEEEcchH---HHHHhh-hccEEEEc
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EMLRRL-VKHQVDCSYVLLSA---VSYIMR-EVSKVIIG 600 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA~~L-~~~GI~vTyI~DSA---VsyiM~-~VdkVLLG 600 (717)
+.|++-+-+..+..+|..+...|. +|++. .|.+.|. ..+..+ ...|+.+.++.... +-..+. ++..|++.
T Consensus 82 ~~i~~~sG~~a~~~~l~~~~~~gd--~vl~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~ 157 (398)
T 1gc0_A 82 AGLALASGMGAITSTLWTLLRPGD--EVLLG--NTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFE 157 (398)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTC--EEEEE--SSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEE
T ss_pred cEEEECCHHHHHHHHHHHHhcCCC--EEEEe--CCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEE
Confidence 455555545555555555433343 55554 3556663 333333 56799999987432 333333 34445442
Q ss_pred eeeEe-cCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 601 AHALL-SNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 601 AdaVl-aNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.+. ..|.+.. --.|+-+|++++++|+|
T Consensus 158 --~~~nptG~~~~---l~~i~~l~~~~~~~li~ 185 (398)
T 1gc0_A 158 --SPANPNMHMAD---IAGVAKIARKHGATVVV 185 (398)
T ss_dssp --SSCTTTCCCCC---HHHHHHHHGGGTCEEEE
T ss_pred --CCCCCCccccc---HHHHHHHHHHcCCEEEE
Confidence 222 2355442 35677889999998876
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=34.93 E-value=1.1e+02 Score=31.41 Aligned_cols=56 Identities=18% Similarity=0.164 Sum_probs=35.2
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL 583 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~ 583 (717)
.+..|++||++|.+.+=..++..|+..|-. +|++++..+.. +.+ +.+.|.+..+-.
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~--~~~---a~~lGa~~vi~~ 223 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAA-QVVVTDLSATR--LSK---AKEIGADLVLQI 223 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCS-EEEEEESCHHH--HHH---HHHTTCSEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEECCCHHH--HHH---HHHhCCCEEEcC
Confidence 478899999999765434445556555532 78888876532 233 345688755443
No 324
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=34.91 E-value=2.5e+02 Score=29.99 Aligned_cols=99 Identities=11% Similarity=-0.027 Sum_probs=59.9
Q ss_pred CCCeEEEecCch-----HHHHHHHHHHHcCCeeEEEEcC-CCCchhHHHHHHHHHhCCCc---EEEEc---chHHHHHhh
Q psy17541 525 NDDVILTYGCSS-----LVEKILLTAHEKGTKFRVIIVD-GSPWYEGKEMLRRLVKHQVD---CSYVL---LSAVSYIMR 592 (717)
Q Consensus 525 dGdvILTyg~SS-----tV~~vL~~A~e~Gk~FrVIVvE-SRP~~EGr~lA~~L~~~GI~---vTyI~---DSAVsyiM~ 592 (717)
++.+|+..|+-. .+..++....+....++++++- ..|.. ..+-..+.+.|+. |.++- +..+..+|.
T Consensus 375 ~~~~v~~~g~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~--~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~ 452 (568)
T 2vsy_A 375 EQGVVLCCFNNSYKLNPQSMARMLAVLREVPDSVLWLLSGPGEAD--ARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYR 452 (568)
T ss_dssp TTSCEEEECCCGGGCCHHHHHHHHHHHHHCTTCEEEEECCSTTHH--HHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGG
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCcEEEEecCCHHHH--HHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHh
Confidence 445666555432 2333444444455667877776 33322 2445556678886 66543 346888999
Q ss_pred hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
.+|.+|+-... |.-.+.+=|-..|+||+++...
T Consensus 453 ~adv~v~ps~~-----------~~g~~~lEAma~G~Pvv~~~g~ 485 (568)
T 2vsy_A 453 HADLFLDTHPY-----------NAHTTASDALWTGCPVLTTPGE 485 (568)
T ss_dssp GCSEEECCSSS-----------CCSHHHHHHHHTTCCEEBCCCS
T ss_pred cCCEEeeCCCC-----------CCcHHHHHHHhCCCCEEeccCC
Confidence 99998765422 2234667788899999996443
No 325
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=34.91 E-value=1.5e+02 Score=29.55 Aligned_cols=85 Identities=16% Similarity=0.155 Sum_probs=50.1
Q ss_pred HHHHHHHHHHhhccCCCeEEEecCchH-HHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHH-HHhCC--CcEEEEcchH
Q psy17541 511 AGNAICMFFHNKLANDDVILTYGCSSL-VEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRR-LVKHQ--VDCSYVLLSA 586 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILTyg~SSt-V~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~-L~~~G--I~vTyI~DSA 586 (717)
..+.|+..+..++.+|.+||=+|++.- ....|.... .....+|+-+|-.|.. ...|++ +...| .+|+++....
T Consensus 56 ~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~-~~~~~~v~gvD~s~~m--l~~A~~~~~~~~~~~~v~~~~~D~ 132 (261)
T 4gek_A 56 IISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNI-HHDNCKIIAIDNSPAM--IERCRRHIDAYKAPTPVDVIEGDI 132 (261)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTC-CSSSCEEEEEESCHHH--HHHHHHHHHTSCCSSCEEEEESCT
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhc-CCCCCEEEEEECCHHH--HHHHHHHHHhhccCceEEEeeccc
Confidence 345677788889999999999999863 222222111 1245789988876542 223333 44445 4688887544
Q ss_pred HHHHhhhccEEE
Q psy17541 587 VSYIMREVSKVI 598 (717)
Q Consensus 587 VsyiM~~VdkVL 598 (717)
..+-....|.|+
T Consensus 133 ~~~~~~~~d~v~ 144 (261)
T 4gek_A 133 RDIAIENASMVV 144 (261)
T ss_dssp TTCCCCSEEEEE
T ss_pred ccccccccccce
Confidence 333234455444
No 326
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=34.86 E-value=42 Score=32.58 Aligned_cols=81 Identities=17% Similarity=0.188 Sum_probs=45.9
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcE
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPV 630 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPV 630 (717)
..+|.++|....+ -..+++.|.+.|+.+.++....-.--+.++|.|||.--. .|+++......-+.-.+...++||
T Consensus 13 ~~~i~~id~~~~~-~~~~~~~l~~~G~~~~vv~~~~~~~~l~~~DglIl~GG~---p~~~~~~~~~~~l~~~~~~~~~Pi 88 (212)
T 2a9v_A 13 MLKIYVVDNGGQW-THREWRVLRELGVDTKIVPNDIDSSELDGLDGLVLSGGA---PNIDEELDKLGSVGKYIDDHNYPI 88 (212)
T ss_dssp CCBEEEEEESCCT-TCHHHHHHHHTTCBCCEEETTSCGGGGTTCSEEEEEEEC---SCGGGTGGGHHHHHHHHHHCCSCE
T ss_pred cceEEEEeCCCcc-HHHHHHHHHHCCCEEEEEeCCCCHHHHhCCCEEEECCCC---CCCCcccccchhHHHHHHhCCCCE
Confidence 3467777765555 345788888889888888753211123347777663211 233433212222233345789999
Q ss_pred Eeccc
Q psy17541 631 LAACE 635 (717)
Q Consensus 631 yV~cE 635 (717)
+-+|-
T Consensus 89 LGIC~ 93 (212)
T 2a9v_A 89 LGICV 93 (212)
T ss_dssp EEETH
T ss_pred EEECh
Confidence 97764
No 327
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=34.78 E-value=4.1e+02 Score=28.76 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=56.5
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCC-CcEEEEcchH---HHHHhh--hccEEE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQ-VDCSYVLLSA---VSYIMR--EVSKVI 598 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~G-I~vTyI~DSA---VsyiM~--~VdkVL 598 (717)
.|..|+.++.+..+..+..-+.+.|.....+++..........+.+.|...| ..+.++.+.. +..++. ++|.+|
T Consensus 311 ~gkrv~i~~~~~~~~~l~~~L~elG~~vv~v~~~~~~~~~~~~~~~ll~~~~~~~~~v~~~~d~~~l~~~i~~~~pDl~i 390 (458)
T 1mio_B 311 QGKKVALLGDPDEIIALSKFIIELGAIPKYVVTGTPGMKFQKEIDAMLAEAGIEGSKVKVEGDFFDVHQWIKNEGVDLLI 390 (458)
T ss_dssp TTCEEEEEECHHHHHHHHHHHHTTTCEEEEEEESSCCHHHHHHHHHHHHTTTCCSCEEEESCBHHHHHHHHHHSCCSEEE
T ss_pred CCCEEEEEcCchHHHHHHHHHHHCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcCCCEEE
Confidence 6789999988877666666666678776655665543332334444455556 5544444322 334444 467665
Q ss_pred EceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 599 IGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 599 LGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
-|.. -.-+|+..++|++.+.
T Consensus 391 g~~~----------------~~~~a~k~gip~~~~~ 410 (458)
T 1mio_B 391 SNTY----------------GKFIAREENIPFVRFG 410 (458)
T ss_dssp ESGG----------------GHHHHHHHTCCEEECS
T ss_pred eCcc----------------hHHHHHHcCCCEEEee
Confidence 3321 2345778899999764
No 328
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=34.78 E-value=40 Score=32.35 Aligned_cols=97 Identities=10% Similarity=0.031 Sum_probs=56.0
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhh--ccEEEEceeeEe
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMRE--VSKVIIGAHALL 605 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~--VdkVLLGAdaVl 605 (717)
+||+.|-++-|-..|.....+| .+|+++.-++..+ .|+.+-+....++..++.. +|.||--|-...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~g--~~V~~~~r~~~~~----------~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~ 69 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSER--HEVIKVYNSSEIQ----------GGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTD 69 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTTT--SCEEEEESSSCCT----------TCEECCTTSHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred EEEEECCCChhHHHHHHHHhcC--CeEEEecCCCcCC----------CCceeccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 5788888777766666555445 6788776555321 2322221112356666665 777765543211
Q ss_pred cC--------CCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 606 SN--------GAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 606 aN--------G~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
.+ -.-+|-.|+..+.-+|+..++.|+.++..
T Consensus 70 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~ 108 (273)
T 2ggs_A 70 VDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTD 108 (273)
T ss_dssp HHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred hhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecc
Confidence 10 00135678999998898888876665543
No 329
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=34.77 E-value=61 Score=32.26 Aligned_cols=71 Identities=15% Similarity=0.179 Sum_probs=42.7
Q ss_pred eEEEecCchHHHHHHHHHHHcCC-eeEEE-EcCCCCchhHHHHHHHHHhCCCcEEEEc-----chHHHHHhh--hccEEE
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGT-KFRVI-IVDGSPWYEGKEMLRRLVKHQVDCSYVL-----LSAVSYIMR--EVSKVI 598 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk-~FrVI-VvESRP~~EGr~lA~~L~~~GI~vTyI~-----DSAVsyiM~--~VdkVL 598 (717)
.||.-|..+....+|. +...|. .++|. |+-.+|...|... -.++|||+.++. +..+...+. ++|.++
T Consensus 12 ~vl~SG~gsnl~all~-~~~~~~~~~~I~~Vis~~~~a~~l~~---A~~~gIp~~~~~~~~~~~~~~~~~L~~~~~Dliv 87 (215)
T 3kcq_A 12 GVLISGRGSNLEALAK-AFSTEESSVVISCVISNNAEARGLLI---AQSYGIPTFVVKRKPLDIEHISTVLREHDVDLVC 87 (215)
T ss_dssp EEEESSCCHHHHHHHH-HTCCC-CSEEEEEEEESCTTCTHHHH---HHHTTCCEEECCBTTBCHHHHHHHHHHTTCSEEE
T ss_pred EEEEECCcHHHHHHHH-HHHcCCCCcEEEEEEeCCcchHHHHH---HHHcCCCEEEeCcccCChHHHHHHHHHhCCCEEE
Confidence 4677777787555554 444443 45544 3334777777543 446799999874 245555555 478877
Q ss_pred Ecee
Q psy17541 599 IGAH 602 (717)
Q Consensus 599 LGAd 602 (717)
+-+=
T Consensus 88 lagy 91 (215)
T 3kcq_A 88 LAGF 91 (215)
T ss_dssp ESSC
T ss_pred EeCC
Confidence 6543
No 330
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=34.75 E-value=88 Score=34.26 Aligned_cols=89 Identities=16% Similarity=0.158 Sum_probs=53.6
Q ss_pred CCCeEEEecCchHHHH-HHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceee
Q psy17541 525 NDDVILTYGCSSLVEK-ILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 525 dGdvILTyg~SStV~~-vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAda 603 (717)
+...|+.+|-..+=.. +-+.+++.| ++|.+.|.++. .+...|.+.||++.+-.+.. .+..+|.|+++. +
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G--~~V~~~D~~~~----~~~~~l~~~gi~~~~g~~~~---~~~~~d~vV~Sp-g 90 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEG--YQISGSDLAPN----SVTQHLTALGAQIYFHHRPE---NVLDASVVVVST-A 90 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTT--CEEEEECSSCC----HHHHHHHHTTCEEESSCCGG---GGTTCSEEEECT-T
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCC--CeEEEEECCCC----HHHHHHHHCCCEEECCCCHH---HcCCCCEEEECC-C
Confidence 4567888866533222 223333344 68889998764 24567899999887644432 245678886654 1
Q ss_pred EecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 604 LLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 604 VlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|-. +.+.-..|++.|+||+=
T Consensus 91 i~~---------~~p~~~~a~~~gi~v~~ 110 (494)
T 4hv4_A 91 ISA---------DNPEIVAAREARIPVIR 110 (494)
T ss_dssp SCT---------TCHHHHHHHHTTCCEEE
T ss_pred CCC---------CCHHHHHHHHCCCCEEc
Confidence 211 24556677888888874
No 331
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=34.69 E-value=1e+02 Score=33.20 Aligned_cols=95 Identities=14% Similarity=0.173 Sum_probs=54.8
Q ss_pred EecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhH-HHHH--------HHHHhCCCcEEEEcc--------hHHHHHhh-
Q psy17541 531 TYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEG-KEML--------RRLVKHQVDCSYVLL--------SAVSYIMR- 592 (717)
Q Consensus 531 Tyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EG-r~lA--------~~L~~~GI~vTyI~D--------SAVsyiM~- 592 (717)
|.|-+..+..+|......|. +|++.+ .|.+.| ..+. ..|...|+.+.++.. .++-..+.
T Consensus 97 ~~sGt~Ai~~al~all~pGD--~Vl~~~-~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~ 173 (427)
T 3i16_A 97 FVNGTHALGAALFGNLRPGN--TMLSVC-GEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKE 173 (427)
T ss_dssp CCSHHHHHHHHHHHHCCTTC--EEEESS-SSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHhCCCC--EEEEeC-CCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhC
Confidence 44444554444444433343 566554 355555 3344 456678999888764 34444454
Q ss_pred --hccEEEEceeeEecCCCeecccchH----HHHHHHHh--CCCcEEe
Q psy17541 593 --EVSKVIIGAHALLSNGAVMSRAGTA----QVSLVARA--FNVPVLA 632 (717)
Q Consensus 593 --~VdkVLLGAdaVlaNG~VvNKiGT~----~VALaAK~--~~VPVyV 632 (717)
+...|++.. +-|+..|..|+. .|+-+|+. ++++|+|
T Consensus 174 ~~~tklV~i~~----s~~~p~nptg~i~dl~~i~~la~~~~~g~~liv 217 (427)
T 3i16_A 174 DESITLVHIQR----STGYGWRRALLIEDIKSIVDCVKNIRKDIICFV 217 (427)
T ss_dssp CTTEEEEEEEC----SCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCEEEEEEc----CCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEE
Confidence 344555433 224566777763 46777888 9998887
No 332
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=34.54 E-value=78 Score=30.17 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=53.1
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHh-CCCcEEEEcc------hHHHHHhh--hccEEEEceeeEecCCCeecccchHHHHH
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVK-HQVDCSYVLL------SAVSYIMR--EVSKVIIGAHALLSNGAVMSRAGTAQVSL 621 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~-~GI~vTyI~D------SAVsyiM~--~VdkVLLGAdaVlaNG~VvNKiGT~~VAL 621 (717)
.|+++.+.+ +++.|.+ .||+|+.+.- ..+...|. ++|+||-=-|-+ |.--...-.+.|=-
T Consensus 39 Gf~l~AT~g--------Ta~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~geIdlVInt~~pl---~~~~h~~D~~~IrR 107 (152)
T 1b93_A 39 QHVLYATGT--------TGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPL---NAVPHDPDVKALLR 107 (152)
T ss_dssp TSEEEEETT--------HHHHHHHHHCCCCEEECCGGGTHHHHHHHHHHTTCCCEEEEECCTT---SCCTTHHHHHHHHH
T ss_pred CCEEEEccH--------HHHHHHHHhCceeEEEEecCCCCCchHHHHHHCCCccEEEEcCCcc---cCCcccccHHHHHH
Confidence 689998887 7889988 9999999852 12555554 699998532200 32222445578888
Q ss_pred HHHhCCCcEEecccCCc
Q psy17541 622 VARAFNVPVLAACETHK 638 (717)
Q Consensus 622 aAK~~~VPVyV~cEtyK 638 (717)
+|-.|+||++---.+-.
T Consensus 108 ~A~~~~IP~~T~latA~ 124 (152)
T 1b93_A 108 LATVWNIPVATNVATAD 124 (152)
T ss_dssp HHHHTTCCEESSHHHHH
T ss_pred HHHHcCCCEEeCHHHHH
Confidence 99999999986544433
No 333
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=34.46 E-value=89 Score=33.72 Aligned_cols=95 Identities=15% Similarity=0.130 Sum_probs=54.3
Q ss_pred EecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHH--------HHHHhCCCcEEEEcc-------hHHHHHhh--
Q psy17541 531 TYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EML--------RRLVKHQVDCSYVLL-------SAVSYIMR-- 592 (717)
Q Consensus 531 Tyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA--------~~L~~~GI~vTyI~D-------SAVsyiM~-- 592 (717)
|.|-+..+..+|....+.|. +|++.+ .|.+.|. .+. ..|...|+.+..+.. .++-..+.
T Consensus 98 ~~sGt~A~~~al~all~pGD--~Vl~~~-~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~ 174 (427)
T 3hvy_A 98 FVNGTHAIGAALFGNLRPND--TMMSIC-GMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKD 174 (427)
T ss_dssp CCSHHHHHHHHHHHTCCTTC--EEEECS-SSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHC
T ss_pred CCcHHHHHHHHHHHhcCCCC--EEEEeC-CCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCC
Confidence 44444554444444333343 555555 4555553 343 456678998888754 34555554
Q ss_pred -hccEEEEceeeEecCCCeecccch----HHHHHHHHh--CCCcEEe
Q psy17541 593 -EVSKVIIGAHALLSNGAVMSRAGT----AQVSLVARA--FNVPVLA 632 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~VvNKiGT----~~VALaAK~--~~VPVyV 632 (717)
+...|++... -|+..|..|+ ..++-+|+. ++++|+|
T Consensus 175 ~~tklV~i~~s----~gyp~nptg~v~dl~~i~~ia~~~~~g~~liv 217 (427)
T 3hvy_A 175 DSIKLIHIQRS----TGYGWRKSLRIAEIAEIIKSIREVNENVIVFV 217 (427)
T ss_dssp TTEEEEEEESS----CCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred CCCEEEEEECC----CCCCCCccccHHHHHHHHHHHHHhCCCCEEEE
Confidence 4556655442 2445666665 456777888 8998887
No 334
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=34.23 E-value=87 Score=31.61 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=58.2
Q ss_pred CCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhh-----hccEEEE
Q psy17541 526 DDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMR-----EVSKVII 599 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~-----~VdkVLL 599 (717)
+.+||+.|-+..|-..|.. +.+.| ..+|++++..+.... ...|....+.+-+-....+..++. ++|.||-
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~V~~~~r~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih 121 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKDGTK---FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFH 121 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT-CCCEEEEECCSSGGG---GGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CcEEEEEecCCCcch---hhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEE
Confidence 4678888888777655554 44445 245666654443211 111212224455444456666666 4787776
Q ss_pred ceeeEecCC-C-----eecccchHHHHHHHHhCCCcEEeccc
Q psy17541 600 GAHALLSNG-A-----VMSRAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 600 GAdaVlaNG-~-----VvNKiGT~~VALaAK~~~VPVyV~cE 635 (717)
-|-...... . -+|-.||..+.-+|+..++.|+.+.-
T Consensus 122 ~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS 163 (357)
T 2x6t_A 122 EGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASS 163 (357)
T ss_dssp CCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcc
Confidence 553221100 0 13667899999888888885555543
No 335
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=34.19 E-value=1e+02 Score=28.00 Aligned_cols=104 Identities=13% Similarity=0.117 Sum_probs=58.9
Q ss_pred CeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEcee
Q psy17541 527 DVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--L-SAVSYIMREVSKVIIGAH 602 (717)
Q Consensus 527 dvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--D-SAVsyiM~~VdkVLLGAd 602 (717)
.+||+.|-++-|-..|. .+.+.| .+|+++.-+|... ..+...++.+...- | ..+..++.++|.||.-|-
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g--~~V~~~~r~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG--YEVTVLVRDSSRL-----PSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCGGGS-----CSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeChhhc-----ccccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 57888888776655444 445556 5777765544211 01112344332211 1 356677788888876553
Q ss_pred eEec-CCCeecccchHHHHHHHHhCCCcEEecccCC
Q psy17541 603 ALLS-NGAVMSRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 603 aVla-NG~VvNKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
.... +-.-+|-.|+..+.-+|+..+++-+|...+.
T Consensus 77 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred CCCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 2110 1122466789999888888888766655443
No 336
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=34.17 E-value=63 Score=31.47 Aligned_cols=91 Identities=15% Similarity=0.126 Sum_probs=48.9
Q ss_pred CeEEEecCchHHHHHHHHHH-HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhh--hccEEEEceee
Q psy17541 527 DVILTYGCSSLVEKILLTAH-EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMR--EVSKVIIGAHA 603 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~-e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~--~VdkVLLGAda 603 (717)
.+||+.|-+..|-..|.... +.| ++|++++-+.. -+.-..++..++. ++|.||--|-.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~-----------------Dl~d~~~~~~~~~~~~~d~vih~A~~ 73 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKN--VEVIPTDVQDL-----------------DITNVLAVNKFFNEKKPNVVINCAAH 73 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS--EEEEEECTTTC-----------------CTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred ceEEEECCCChHHHHHHHHHHhCC--CeEEeccCccC-----------------CCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 56777777766655554433 333 66776654310 0001123444555 46666654422
Q ss_pred EecC--------CCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 604 LLSN--------GAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 604 VlaN--------G~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
...+ -.-+|-.||..+.-+|+..++.|+.+.-.
T Consensus 74 ~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~ 114 (292)
T 1vl0_A 74 TAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTD 114 (292)
T ss_dssp CCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechH
Confidence 1100 01246678999998898888866655443
No 337
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=34.14 E-value=64 Score=31.86 Aligned_cols=100 Identities=8% Similarity=-0.090 Sum_probs=50.9
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhC--CCcEEEEcch-------HHHH-Hhhh---
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKH--QVDCSYVLLS-------AVSY-IMRE--- 593 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~--GI~vTyI~DS-------AVsy-iM~~--- 593 (717)
.+++|-|-+..+..+|..+...| -.|++. .|.+-+...+..+... |+.+..++.. .+-. .+.+
T Consensus 61 ~v~~~~~gt~a~~~al~~~~~~g--d~vi~~--~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~i~~~~~ 136 (356)
T 1v72_A 61 EVFLVPTGTAANALCLSAMTPPW--GNIYCH--PASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVRLRERTREKVGD 136 (356)
T ss_dssp EEEEESCHHHHHHHHHHTSCCTT--EEEEEC--TTSHHHHSSTTHHHHHTTSCEEEECCCGGGCCCHHHHHHHTTSSTTC
T ss_pred cEEEeCCccHHHHHHHHHhcCCC--CEEEEc--CccchhhhhchHHHHHhCCcEEEEecCCCCeEcHHHHHHHhhhcchh
Confidence 36777777766665555543222 345553 3544332111113333 8877776532 3333 3432
Q ss_pred -----ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 594 -----VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 594 -----VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
+..|++-. ....|.++..-=-..|+-+|++|+++|++
T Consensus 137 ~~~~~~~~v~~~~--~~~tG~~~~~~~l~~i~~~~~~~~~~li~ 178 (356)
T 1v72_A 137 VHTTQPACVSITQ--ATEVGSIYTLDEIEAIGDVCKSSSLGLHM 178 (356)
T ss_dssp TTSCEEEEEEEES--SCTTSCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred hccCCceEEEEEc--CCCCCccCCHHHHHHHHHHHHHcCCeEEE
Confidence 33344432 12234444333334677889999999876
No 338
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=34.12 E-value=1e+02 Score=26.98 Aligned_cols=81 Identities=17% Similarity=0.164 Sum_probs=48.6
Q ss_pred CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEE-EEcchH--HHHHhh---hccEEEEceeeEecCCCeecccchHHHHHH
Q psy17541 549 GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCS-YVLLSA--VSYIMR---EVSKVIIGAHALLSNGAVMSRAGTAQVSLV 622 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vT-yI~DSA--VsyiM~---~VdkVLLGAdaVlaNG~VvNKiGT~~VALa 622 (717)
+..++|+|+|..+... ..+...|.+.|+.+. ...+.. +..+-. ..|.||+..+- .+ .-|--.+..+
T Consensus 34 ~~~~~Ilivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l--~~-----~~g~~~~~~l 105 (157)
T 3hzh_A 34 GIPFNVLIVDDSVFTV-KQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITM--PK-----MDGITCLSNI 105 (157)
T ss_dssp TEECEEEEECSCHHHH-HHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSC--SS-----SCHHHHHHHH
T ss_pred CCceEEEEEeCCHHHH-HHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccC--CC-----ccHHHHHHHH
Confidence 4567999999877542 345667778899886 444322 222222 56899887643 22 2233333333
Q ss_pred H-HhCCCcEEecccCC
Q psy17541 623 A-RAFNVPVLAACETH 637 (717)
Q Consensus 623 A-K~~~VPVyV~cEty 637 (717)
- ...++||++++...
T Consensus 106 r~~~~~~~ii~ls~~~ 121 (157)
T 3hzh_A 106 MEFDKNARVIMISALG 121 (157)
T ss_dssp HHHCTTCCEEEEESCC
T ss_pred HhhCCCCcEEEEeccC
Confidence 3 34579999988754
No 339
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=34.05 E-value=70 Score=32.62 Aligned_cols=18 Identities=6% Similarity=-0.199 Sum_probs=9.5
Q ss_pred cccchHHHHHHHHhCCCc
Q psy17541 612 SRAGTAQVSLVARAFNVP 629 (717)
Q Consensus 612 NKiGT~~VALaAK~~~VP 629 (717)
|-.|+..++-+|+..+++
T Consensus 69 n~~~~~~l~~a~~~~~~~ 86 (369)
T 3st7_A 69 NVSYLDHVLDILTRNTKK 86 (369)
T ss_dssp CCBHHHHHHHHHTTCSSC
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 445555555555555543
No 340
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=33.96 E-value=61 Score=33.79 Aligned_cols=92 Identities=5% Similarity=0.023 Sum_probs=55.0
Q ss_pred HHHHHHHHHh----hccC-CCeEEEecCchHHHHHHHHHHHc---CCeeEEEEcCC----CCchhHHHHHHHHHhC-CCc
Q psy17541 512 GNAICMFFHN----KLAN-DDVILTYGCSSLVEKILLTAHEK---GTKFRVIIVDG----SPWYEGKEMLRRLVKH-QVD 578 (717)
Q Consensus 512 ~e~Ia~~A~e----~I~d-GdvILTyg~SStV~~vL~~A~e~---Gk~FrVIVvES----RP~~EGr~lA~~L~~~-GI~ 578 (717)
.+.|+..|++ +|.+ |++ +-+++++|+..+....... .+.++|+-++. .|......+++.|.++ |++
T Consensus 124 k~~ia~~AA~~l~~~i~~~~~~-igl~~GsT~~~~~~~L~~~~~~~~~v~vv~l~ggl~~~~~~~~~~i~~~la~~~~~~ 202 (345)
T 2o0m_A 124 LSDFGDVLTNTLNLLLPNGENT-IAVMGGTTMAMVAENMGSLETEKRHNLFVPARGGIGEAVSVQANSISAVMANKTGGN 202 (345)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEE-EEECCSHHHHHHHHTCCCCCCSSEEEEEEESBSCCCCCGGGSHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHhcCcCCCE-EEECCcHHHHHHHHHhhhccCCCCCcEEEEcCCcCCCCcccCHHHHHHHHHHHhCCc
Confidence 3456666655 4888 655 4568999988877766432 14566665442 2223345778888876 877
Q ss_pred EEEEcc--h---HH-HHHh------------hhccEEEEceeeE
Q psy17541 579 CSYVLL--S---AV-SYIM------------REVSKVIIGAHAL 604 (717)
Q Consensus 579 vTyI~D--S---AV-syiM------------~~VdkVLLGAdaV 604 (717)
+.++.. . .. -.++ ..+|++|+|.-.+
T Consensus 203 ~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG~~ 246 (345)
T 2o0m_A 203 YRALYVPEQLSRETYNSLLQEPSIQEVLTLISHANCVVHSIGRA 246 (345)
T ss_dssp ECCCCCCSSCCHHHHHHHHTCHHHHHHHHHHHTCSEEEECCEEH
T ss_pred eEEEeccccCCHHHHHHHHhChHHHHHHHHHHcCCEEEEccCCc
Confidence 764321 1 11 1112 2699999998654
No 341
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=33.92 E-value=1.5e+02 Score=24.93 Aligned_cols=83 Identities=11% Similarity=0.015 Sum_probs=50.5
Q ss_pred cCCeeEEEEcCCCCchhHHHHHHHHHhCCC--cEEEEcchH--HHHHh------hhccEEEEceeeEecCCCeecccchH
Q psy17541 548 KGTKFRVIIVDGSPWYEGKEMLRRLVKHQV--DCSYVLLSA--VSYIM------REVSKVIIGAHALLSNGAVMSRAGTA 617 (717)
Q Consensus 548 ~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI--~vTyI~DSA--VsyiM------~~VdkVLLGAdaVlaNG~VvNKiGT~ 617 (717)
.++..+|+|+|..|.. ...+...|...|. .|....+.. +.++- ...|.||+..+ +.++ -|--
T Consensus 6 ~~~~~~iLivdd~~~~-~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~--l~~~-----~g~~ 77 (146)
T 3ilh_A 6 TRKIDSVLLIDDDDIV-NFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDIN--MPGI-----NGWE 77 (146)
T ss_dssp -CCEEEEEEECSCHHH-HHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESS--CSSS-----CHHH
T ss_pred cCccceEEEEeCCHHH-HHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCC--CCCC-----CHHH
Confidence 3567789999887754 3345667777887 666666543 33332 34899998654 2222 2334
Q ss_pred HHHHHHH-----hCCCcEEecccCCc
Q psy17541 618 QVSLVAR-----AFNVPVLAACETHK 638 (717)
Q Consensus 618 ~VALaAK-----~~~VPVyV~cEtyK 638 (717)
.+..+-+ ...+||++++....
T Consensus 78 ~~~~l~~~~~~~~~~~~ii~~t~~~~ 103 (146)
T 3ilh_A 78 LIDLFKQHFQPMKNKSIVCLLSSSLD 103 (146)
T ss_dssp HHHHHHHHCGGGTTTCEEEEECSSCC
T ss_pred HHHHHHHhhhhccCCCeEEEEeCCCC
Confidence 4444444 36899999887653
No 342
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=33.81 E-value=87 Score=30.86 Aligned_cols=92 Identities=11% Similarity=0.052 Sum_probs=50.2
Q ss_pred CeEEEecCchHHHHHHHHHH-HcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhh--hccEEEEceee
Q psy17541 527 DVILTYGCSSLVEKILLTAH-EKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMR--EVSKVIIGAHA 603 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~-e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~--~VdkVLLGAda 603 (717)
.+||+.|-+..|-..|.... +.| ++|+++..++. | + +.-..++..++. ++|.||--|-.
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g--~~v~~~~r~~~--~------------D--~~d~~~~~~~~~~~~~d~vih~a~~ 65 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRG--DVELVLRTRDE--L------------N--LLDSRAVHDFFASERIDQVYLAAAK 65 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCT--TEEEECCCTTT--C------------C--TTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC--CeEEEEecCcc--C------------C--ccCHHHHHHHHHhcCCCEEEEcCee
Confidence 46777777766655554433 333 46666654431 0 1 011134455555 56777655432
Q ss_pred Eec------CC---CeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 604 LLS------NG---AVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 604 Vla------NG---~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
... +- .-+|-.||..+.-+|+..++.-+|...+
T Consensus 66 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS 107 (321)
T 1e6u_A 66 VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGS 107 (321)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 110 00 0136689999999999999865555444
No 343
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=33.77 E-value=91 Score=30.32 Aligned_cols=20 Identities=20% Similarity=0.250 Sum_probs=10.5
Q ss_pred HHHHHHHHcCCeeEEEEcCC
Q psy17541 540 KILLTAHEKGTKFRVIIVDG 559 (717)
Q Consensus 540 ~vL~~A~e~Gk~FrVIVvES 559 (717)
.+++...+.|-..+|+++++
T Consensus 19 ~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 19 KLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp HHHHHHHHTTCEEEEEECHH
T ss_pred HHHHHHHHCCCEEEEEEChh
Confidence 33444444465666666554
No 344
>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} SCOP: c.51.4.2 PDB: 1exc_A*
Probab=33.73 E-value=1e+02 Score=30.14 Aligned_cols=91 Identities=16% Similarity=0.273 Sum_probs=53.7
Q ss_pred EecCchHHHHHHHHHHHcCCeeEEEEc---CC-CCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEec
Q psy17541 531 TYGCSSLVEKILLTAHEKGTKFRVIIV---DG-SPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLS 606 (717)
Q Consensus 531 Tyg~SStV~~vL~~A~e~Gk~FrVIVv---ES-RP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVla 606 (717)
..+.+|--+.-|+.- .|..|.|+.. |+ .|...-..++.+|+...- .++..-+. -+ ++||||.|+.
T Consensus 6 ILAS~SPrR~eLL~~--~gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA-------~av~~~~~-~~-~VigaDTvV~ 74 (189)
T 1ex2_A 6 ILASQSPRRKELLDL--LQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKA-------KAVADLHP-HA-IVIGADTMVC 74 (189)
T ss_dssp EECCCCHHHHHHHHT--TCCCCEECCCCCCCCCCTTSCHHHHHHHHHHHHH-------HHHHHHCT-TS-EEEEEEEEEE
T ss_pred EEECCCHHHHHHHHh--CCCCeEEECCCCCCCCCCCCCHHHHHHHHHHHHH-------HHHHHHcC-CC-eEEEeCeEEE
Confidence 344444334433332 4899998843 44 232223567777765331 12222221 23 8999999987
Q ss_pred -CCCeecccchHHHH--HHHHhCCCcEEe
Q psy17541 607 -NGAVMSRAGTAQVS--LVARAFNVPVLA 632 (717)
Q Consensus 607 -NG~VvNKiGT~~VA--LaAK~~~VPVyV 632 (717)
||.++.|-.+..-| |+..-.|...-|
T Consensus 75 ~~g~ilgKP~~~~eA~~mL~~lsG~~h~v 103 (189)
T 1ex2_A 75 LDGECLGKPQDQEEAASMLRRLSGRSHSV 103 (189)
T ss_dssp ETTEEECCCSSHHHHHHHHHHHTTSEEEE
T ss_pred ECCEEcCCCCCHHHHHHHHHHhCCCcEEE
Confidence 99999999998766 566655655443
No 345
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=33.57 E-value=30 Score=36.71 Aligned_cols=79 Identities=15% Similarity=0.136 Sum_probs=46.4
Q ss_pred hhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEc
Q psy17541 521 NKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIG 600 (717)
Q Consensus 521 e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLG 600 (717)
....++.+||+.|.+..-..++..|.+.| ++|+++| .|...+..++... .-+...|.-..++-.+..++|.|+.+
T Consensus 19 ~~mm~~~~I~ilGgG~lg~~l~~aa~~lG--~~v~~~d-~~~~p~~~~ad~~--~~~~~~~~d~~~l~~~a~~~d~i~~e 93 (403)
T 3k5i_A 19 GHMWNSRKVGVLGGGQLGRMLVESANRLN--IQVNVLD-ADNSPAKQISAHD--GHVTGSFKEREAVRQLAKTCDVVTAE 93 (403)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEE-STTCTTGGGCCSS--CCEESCTTCHHHHHHHHTTCSEEEES
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEE-CCCCcHHHhcccc--ceeecCCCCHHHHHHHHHhCCEEEEC
Confidence 33456789999999998888888888766 5677777 4543333222100 11111111234566667778888776
Q ss_pred eeeE
Q psy17541 601 AHAL 604 (717)
Q Consensus 601 AdaV 604 (717)
.+.+
T Consensus 94 ~e~~ 97 (403)
T 3k5i_A 94 IEHV 97 (403)
T ss_dssp SSCS
T ss_pred CCCC
Confidence 5554
No 346
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=33.33 E-value=1.4e+02 Score=29.72 Aligned_cols=109 Identities=16% Similarity=0.112 Sum_probs=60.0
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHh-CCCcEEEEc-----chHHHHHhh--hcc
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVK-HQVDCSYVL-----LSAVSYIMR--EVS 595 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~-~GI~vTyI~-----DSAVsyiM~--~Vd 595 (717)
.+.+||+.|-++-|-..|.. ..+.| .+|++++-++... ...+..+.. .|-.+.++. ..++..++. .+|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHG--YDVVIADNLVNSK-REAIARIEKITGKTPAFHETDVSDERALARIFDAHPIT 80 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTT--CEEEEECCCSSSC-THHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCC--CcEEEEecCCcch-HHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCc
Confidence 45688999888776555544 44455 5677776444322 223333332 133344432 234666666 567
Q ss_pred EEEEceeeEecCC--------CeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 596 KVIIGAHALLSNG--------AVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 596 kVLLGAdaVlaNG--------~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
.||--|-...... .-.|-.||..+.-+++..+++-+|...+
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS 129 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSS 129 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence 6665442211000 0126678999998999998865655444
No 347
>4eu9_A Succinyl-COA:acetate coenzyme A transferase; HET: COA; 1.48A {Acetobacter aceti} PDB: 4eua_A* 4eu3_A* 4eu4_A* 4eu5_A* 4eu6_A* 4eu7_A* 4eu8_A* 4eub_A* 4euc_A* 4eud_A*
Probab=33.11 E-value=1.2e+02 Score=33.73 Aligned_cols=96 Identities=20% Similarity=0.265 Sum_probs=57.4
Q ss_pred HHHHhhccCCCeEEEecCc-----hHHHHHHHH-H---HHcCCe--eEEEEcC-CCCchhHHH----------------H
Q psy17541 517 MFFHNKLANDDVILTYGCS-----SLVEKILLT-A---HEKGTK--FRVIIVD-GSPWYEGKE----------------M 568 (717)
Q Consensus 517 ~~A~e~I~dGdvILTyg~S-----StV~~vL~~-A---~e~Gk~--FrVIVvE-SRP~~EGr~----------------l 568 (717)
+.|+.+|+|||+|.+.|+. ..+...|.. + +..|.. +.++... ..|..++.. .
T Consensus 18 eEAv~~IkdGd~V~~~Gf~~~G~P~~L~~ALa~R~~~~~~~g~~~~i~l~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~ 97 (514)
T 4eu9_A 18 ETASELIKHGDVVGTSGFTGAGYPKEVPKALAQRMEAAHDRGEKYQISLITGASTGPQLDGELAKANGVYFRSPFNTDAT 97 (514)
T ss_dssp HHHHTTCCTTCEEEECCBTTBSCCCHHHHHHHHHHHHHHHTTCCCCEEEECSSCCCTTTHHHHHHTTCEEEEESCCCCHH
T ss_pred HHHHHhCCCCCEEEECCCCCCcCHHHHHHHHHHHHHHhhcCCcceeEEEEEecCcCcccccccccCCCEEEEEecCCCHH
Confidence 3456789999999998752 244555533 2 223444 4444333 234443321 2
Q ss_pred HHHHHhCC-CcEEEEcchHHHHHhh-----hccEEEEceeeEecCCCeec
Q psy17541 569 LRRLVKHQ-VDCSYVLLSAVSYIMR-----EVSKVIIGAHALLSNGAVMS 612 (717)
Q Consensus 569 A~~L~~~G-I~vTyI~DSAVsyiM~-----~VdkVLLGAdaVlaNG~VvN 612 (717)
.+.+...| +...-+..+.++..+. .+|..|+.+..+-.+|.+.-
T Consensus 98 ~R~~i~~G~~~y~p~~ls~~~~~~~~~~~~~iDVAlI~as~~De~Gnis~ 147 (514)
T 4eu9_A 98 MRNRINAGETEYFDNHLGQVAGRAVQGNYGKFNIALVEATAITEDGGIVP 147 (514)
T ss_dssp HHHHHHTTSSEECCCCGGGHHHHHHHTTTCCCCEEEEEEEEECTTCCEEE
T ss_pred HHHHHHcCCeeEECccccchHHHHHhccCCCceEEEEEEEcCCCCceEEe
Confidence 45566666 3333344566664442 58999999999999999863
No 348
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=32.76 E-value=1.5e+02 Score=25.25 Aligned_cols=80 Identities=14% Similarity=0.081 Sum_probs=46.6
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHH--HHh-hhccEEEEceeeEecCCCeecccchHHHHHHHH---
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVS--YIM-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR--- 624 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVs--yiM-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK--- 624 (717)
..+|+|+|..|... ..+...|...|+.|....+..-+ .+- ...|.||+..+ +.++ -|.-.+..+-.
T Consensus 4 ~~~iLivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~--lp~~-----~g~~~~~~lr~~~~ 75 (136)
T 3t6k_A 4 PHTLLIVDDDDTVA-EMLELVLRGAGYEVRRAASGEEALQQIYKNLPDALICDVL--LPGI-----DGYTLCKRVRQHPL 75 (136)
T ss_dssp CCEEEEECSCHHHH-HHHHHHHHHTTCEEEEESSHHHHHHHHHHSCCSEEEEESC--CSSS-----CHHHHHHHHHHSGG
T ss_pred CCEEEEEeCCHHHH-HHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCC--CCCC-----CHHHHHHHHHcCCC
Confidence 35778888776542 34556677788887766554322 222 24788888643 3322 24444444433
Q ss_pred hCCCcEEecccCCc
Q psy17541 625 AFNVPVLAACETHK 638 (717)
Q Consensus 625 ~~~VPVyV~cEtyK 638 (717)
..++||++++....
T Consensus 76 ~~~~pii~~t~~~~ 89 (136)
T 3t6k_A 76 TKTLPILMLTAQGD 89 (136)
T ss_dssp GTTCCEEEEECTTC
T ss_pred cCCccEEEEecCCC
Confidence 24799999887543
No 349
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=32.67 E-value=2e+02 Score=27.11 Aligned_cols=76 Identities=8% Similarity=0.090 Sum_probs=47.9
Q ss_pred CCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh------
Q psy17541 525 NDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR------ 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~------ 592 (717)
.|.+||+.|-|+-+-..|. ...+.| .+|++++.|.......+...|...|..+.++. | .++..++.
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G--~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMG--ANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3567888888876655444 344455 57888866654445567777877787777653 2 23444444
Q ss_pred -hccEEEEcee
Q psy17541 593 -EVSKVIIGAH 602 (717)
Q Consensus 593 -~VdkVLLGAd 602 (717)
.+|.||--|-
T Consensus 82 ~~~d~vi~~Ag 92 (247)
T 2hq1_A 82 GRIDILVNNAG 92 (247)
T ss_dssp SCCCEEEECC-
T ss_pred CCCCEEEECCC
Confidence 5788877663
No 350
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=32.61 E-value=2e+02 Score=28.76 Aligned_cols=96 Identities=11% Similarity=0.073 Sum_probs=52.5
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc---hHHHHHhhh-------ccE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL---SAVSYIMRE-------VSK 596 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D---SAVsyiM~~-------Vdk 596 (717)
+.|++-+-+..+..+|......| -.|++. .|.+.+. ...+...|+++..+.. ..+-.++.+ +..
T Consensus 105 ~~i~~~sGt~a~~~~l~~~~~~g--d~v~~~--~~~~~~~--~~~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 178 (399)
T 3tqx_A 105 DTILYSSCFDANGGLFETLLGPE--DAIISD--ELNHASI--IDGIRLCKAQRYRYKNNAMGDLEAKLKEADEKGARFKL 178 (399)
T ss_dssp EEEEESCHHHHHHTTHHHHCCTT--CEEEEE--TTCCHHH--HHHHHSCCSEEEEECTTCTTHHHHHHHHHHTTTCSSEE
T ss_pred cEEEECchHHHHHHHHHHhcCCC--CEEEEC--CcccHHH--HHHHHHcCCceeEeCCCCHHHHHHHHHhhhccCCCceE
Confidence 34444443555554444443233 244443 4555553 3345567888887762 344444543 445
Q ss_pred EEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 597 VIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 597 VLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
|++.. .-...|.++. --.|+-+|+.|++++++
T Consensus 179 v~~~~-~~nptG~~~~---l~~i~~l~~~~~~~li~ 210 (399)
T 3tqx_A 179 IATDG-VFSMDGIIAD---LKSICDLADKYNALVMV 210 (399)
T ss_dssp EEEES-EETTTTEECC---HHHHHHHHHHTTCEEEE
T ss_pred EEEeC-CCCCCCCcCC---HHHHHHHHHHcCCEEEE
Confidence 54443 2234555555 45788889999998776
No 351
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=32.54 E-value=1.5e+02 Score=30.64 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=34.4
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
.+..|++||++|.+.+=..++..|+..|-. +|++++..+.. +.++ .+.|.+..+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~--~~~a---~~lGa~~vi 241 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGAS-RIIGVGTHKDK--FPKA---IELGATECL 241 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECSCGGG--HHHH---HHTTCSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEECCCHHH--HHHH---HHcCCcEEE
Confidence 367899999999765434445556555532 78888876643 2344 456876544
No 352
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=32.42 E-value=1.9e+02 Score=29.82 Aligned_cols=99 Identities=13% Similarity=0.099 Sum_probs=53.5
Q ss_pred ccCCCeEEEecCchHHH-HHHHHH-HH--cC--------CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc------
Q psy17541 523 LANDDVILTYGCSSLVE-KILLTA-HE--KG--------TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL------ 584 (717)
Q Consensus 523 I~dGdvILTyg~SStV~-~vL~~A-~e--~G--------k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D------ 584 (717)
+....+|+|-|.+..+. .++..+ .. .| ..-+|+|.+ |.+.+.. ..+...|+.+..++.
T Consensus 93 ~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~--p~y~~~~--~~~~~~g~~~~~v~~~~~g~d 168 (427)
T 3ppl_A 93 VPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPV--PGYDRHF--SITERFGFEMISVPMNEDGPD 168 (427)
T ss_dssp SCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEE--SCCHHHH--HHHHHTTCEEEEEEEETTEEC
T ss_pred CCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcC--CCcHHHH--HHHHHcCCEEEEeCCCCCCCC
Confidence 44457888888887764 344444 33 21 023555543 6666643 344557888877752
Q ss_pred -hHHHHHhh--hccEEEEceeeEecCCCeecccch-------HHHHHHH-HhCCCcEEe
Q psy17541 585 -SAVSYIMR--EVSKVIIGAHALLSNGAVMSRAGT-------AQVSLVA-RAFNVPVLA 632 (717)
Q Consensus 585 -SAVsyiM~--~VdkVLLGAdaVlaNG~VvNKiGT-------~~VALaA-K~~~VPVyV 632 (717)
.++-..+. ++.. |+-+...-|..|+ ..|+-+| +.|++.|++
T Consensus 169 ~~~l~~~l~~~~~~~-------v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~ 220 (427)
T 3ppl_A 169 MDAVEELVKNPQVKG-------MWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVW 220 (427)
T ss_dssp HHHHHHHTTSTTEEE-------EEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEE
T ss_pred HHHHHHHHhcCCCeE-------EEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEE
Confidence 23333342 2322 3333334455554 3566667 888987765
No 353
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=32.27 E-value=1.6e+02 Score=30.40 Aligned_cols=54 Identities=13% Similarity=0.108 Sum_probs=34.3
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
.+..|++||++|.+.+=..++..|+..|-. +|++++..+.. +.++ .+.|.+..+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-~Vi~~~~~~~~--~~~~---~~lGa~~vi 241 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAGAA-RIIGVDINKDK--FAKA---KEVGATECV 241 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCS-EEEEECSCGGG--HHHH---HHTTCSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCCHHH--HHHH---HHhCCceEe
Confidence 467899999999655434455556555532 78888876643 2333 456876544
No 354
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=32.25 E-value=89 Score=27.01 Aligned_cols=80 Identities=15% Similarity=0.158 Sum_probs=42.5
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--HHHHh-hhccEEEEceeeEecCCCeecccchHHHHHHHH--
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--VSYIM-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR-- 624 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--VsyiM-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK-- 624 (717)
+.++|+|+|..|... ..+...|...|+.|....+.. +..+- ...|.||+..+ +.++ -|.-.+..+-.
T Consensus 13 ~~~~iLivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvl~D~~--mp~~-----~g~~~~~~lr~~~ 84 (143)
T 3m6m_D 13 RSMRMLVADDHEANR-MVLQRLLEKAGHKVLCVNGAEQVLDAMAEEDYDAVIVDLH--MPGM-----NGLDMLKQLRVMQ 84 (143)
T ss_dssp --CEEEEECSSHHHH-HHHHHHHHC--CEEEEESSHHHHHHHHHHSCCSEEEEESC--CSSS-----CHHHHHHHHHHHH
T ss_pred ccceEEEEeCCHHHH-HHHHHHHHHcCCeEEEeCCHHHHHHHHhcCCCCEEEEeCC--CCCC-----CHHHHHHHHHhch
Confidence 456788888776542 345556677788877665533 22221 24788888543 3322 23333333321
Q ss_pred ---hCCCcEEecccCC
Q psy17541 625 ---AFNVPVLAACETH 637 (717)
Q Consensus 625 ---~~~VPVyV~cEty 637 (717)
...+||++++...
T Consensus 85 ~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 85 ASGMRYTPVVVLSADV 100 (143)
T ss_dssp HTTCCCCCEEEEESCC
T ss_pred hccCCCCeEEEEeCCC
Confidence 1358999987654
No 355
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=32.21 E-value=90 Score=32.50 Aligned_cols=53 Identities=17% Similarity=0.103 Sum_probs=34.8
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
.+..|++||++|.+.+=..++..|+..|- +||+++.++.. +.++++ .|.+..+
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga--~Vi~~~~~~~~--~~~a~~---lGa~~vi 243 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA--HVVAFTTSEAK--REAAKA---LGADEVV 243 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSGGG--HHHHHH---HTCSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHH---cCCcEEe
Confidence 47789999999987643445556665664 58988876543 344444 5765444
No 356
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=32.11 E-value=30 Score=35.73 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=25.6
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVII 556 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIV 556 (717)
.|..||+.|.+.+...-+....+.|-.+.||-
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtVia 43 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVS 43 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEc
Confidence 57899999999988888888888887655553
No 357
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=32.09 E-value=1.5e+02 Score=30.50 Aligned_cols=54 Identities=11% Similarity=0.072 Sum_probs=34.5
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
.+..|++||++|.+.+=..++..|+..|-. +|++++..+.. +.++ .+.|.+..+
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~--~~~a---~~lGa~~vi 245 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAGAS-RIIAIDINGEK--FPKA---KALGATDCL 245 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCS-EEEEECSCGGG--HHHH---HHTTCSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCCHHH--HHHH---HHhCCcEEE
Confidence 467899999999755434455556555531 78888877643 2333 456876544
No 358
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=32.04 E-value=2.1e+02 Score=29.02 Aligned_cols=68 Identities=12% Similarity=0.077 Sum_probs=39.3
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEE-EcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHh--hhccEEEEce
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVI-IVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIM--REVSKVIIGA 601 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVI-VvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM--~~VdkVLLGA 601 (717)
-.|-.+|.+..-...+..+...-..++|+ |+|..|. ..+.+++ +.|++-.|- | .--++ +++|.|+|..
T Consensus 24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~-~a~~~a~---~~g~~~~y~-d--~~ell~~~~iDaV~I~t 94 (350)
T 4had_A 24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLT-RAREMAD---RFSVPHAFG-S--YEEMLASDVIDAVYIPL 94 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHH-HHHHHHH---HHTCSEEES-S--HHHHHHCSSCSEEEECS
T ss_pred cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHH-HHHHHHH---HcCCCeeeC-C--HHHHhcCCCCCEEEEeC
Confidence 36888999886555555555555668877 5665442 2233333 347764442 2 22233 4689988754
No 359
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=31.96 E-value=51 Score=31.64 Aligned_cols=78 Identities=18% Similarity=0.232 Sum_probs=44.1
Q ss_pred CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCeeccc-------chHHHHH
Q psy17541 549 GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRA-------GTAQVSL 621 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKi-------GT~~VAL 621 (717)
+...+|.|++- +. .=..+.+.|...|+.+.++.+.. -+.++|.|||+ |+--... +...+-.
T Consensus 18 ~~~~~I~ii~~-~~-~~~~~~~~l~~~g~~~~~~~~~~---~l~~~d~iil~-------GG~~~~~~~~~~~~~~~~~i~ 85 (208)
T 2iss_D 18 GSHMKIGVLGV-QG-DVREHVEALHKLGVETLIVKLPE---QLDMVDGLILP-------GGESTTMIRILKEMDMDEKLV 85 (208)
T ss_dssp --CCEEEEECS-SS-CHHHHHHHHHHTTCEEEEECSGG---GGGGCSEEEEC-------SSCHHHHHHHHHHTTCHHHHH
T ss_pred CCCcEEEEEEC-CC-chHHHHHHHHHCCCEEEEeCChH---HHhhCCEEEEC-------CCcHHHHHhhhhhhhHHHHHH
Confidence 35567777764 32 11346788888999999887543 14567777664 3211111 1122222
Q ss_pred HHHhCCCcEEecccCCc
Q psy17541 622 VARAFNVPVLAACETHK 638 (717)
Q Consensus 622 aAK~~~VPVyV~cEtyK 638 (717)
-+...++||+-+|--+-
T Consensus 86 ~~~~~g~PilGIC~G~Q 102 (208)
T 2iss_D 86 ERINNGLPVFATCAGVI 102 (208)
T ss_dssp HHHHTTCCEEEETHHHH
T ss_pred HHHHCCCeEEEECHHHH
Confidence 23357999998775544
No 360
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=31.92 E-value=1.5e+02 Score=31.64 Aligned_cols=94 Identities=15% Similarity=0.178 Sum_probs=52.0
Q ss_pred ecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHH-HHH-------HHHHhCCCcEEEEcc--------hHHHHHhh-hc
Q psy17541 532 YGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGK-EML-------RRLVKHQVDCSYVLL--------SAVSYIMR-EV 594 (717)
Q Consensus 532 yg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr-~lA-------~~L~~~GI~vTyI~D--------SAVsyiM~-~V 594 (717)
.|-+..+..+|....+.|. +|++.+ .|.+.+. .++ ..|...|+.+.++.. .++-..+. +.
T Consensus 84 ~sGt~Ai~~al~all~~GD--~Vl~~~-~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~~t 160 (409)
T 3jzl_A 84 ISGTHAISTVLFGILRPDD--ELLYIT-GQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKT 160 (409)
T ss_dssp CSHHHHHHHHHHHHCCTTC--EEEECS-SSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCTTE
T ss_pred ccHHHHHHHHHHHhcCCCC--EEEEeC-CCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccCCC
Confidence 3333444444444433343 555554 3555553 343 456778999888754 23333343 23
Q ss_pred cEEEEceeeEecCCCeecccchH----HHHHHHHh--CCCcEEe
Q psy17541 595 SKVIIGAHALLSNGAVMSRAGTA----QVSLVARA--FNVPVLA 632 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNKiGT~----~VALaAK~--~~VPVyV 632 (717)
..|++.. +-|++.|..|+. .|+-+|+. ++++|+|
T Consensus 161 klV~i~~----s~g~p~nptg~v~~l~~I~~la~~~~~~~~liv 200 (409)
T 3jzl_A 161 KMIGIQR----SRGYADRPSFTIEKIKEMIVFVKNINPEVIVFV 200 (409)
T ss_dssp EEEEEEC----SCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred eEEEEEC----CCCCCCCCcCccccHHHHHHHHHhhCCCCEEEE
Confidence 3443321 235577777764 46777888 9998887
No 361
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=31.82 E-value=1e+02 Score=30.30 Aligned_cols=70 Identities=13% Similarity=0.229 Sum_probs=41.0
Q ss_pred eEEEecCchHHHHHHHHHHHcCC-eeEEEEc-CCCCchhHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh--h
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGT-KFRVIIV-DGSPWYEGKEMLRRLVKHQVDCSYVLL----------SAVSYIMR--E 593 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk-~FrVIVv-ESRP~~EGr~lA~~L~~~GI~vTyI~D----------SAVsyiM~--~ 593 (717)
.||.-|.++..+.++ .+.+.|. .++|..+ -.+|...|+..| .+.|||+.++.. ..+...+. +
T Consensus 4 aVl~SG~Gs~L~aLi-~~~~~~~~~~~I~~Vvs~~~~~~~~~~A---~~~gIp~~~~~~~~~~~r~~~~~~~~~~l~~~~ 79 (209)
T 1meo_A 4 AVLISGTGSNLQALI-DSTREPNSSAQIDIVISNKAAVAGLDKA---ERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFS 79 (209)
T ss_dssp EEEESSSCTTHHHHH-HHHHSTTCSCEEEEEEESSTTCHHHHHH---HHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTT
T ss_pred EEEEECCchHHHHHH-HHHhcCCCCcEEEEEEeCCCChHHHHHH---HHcCCCEEEECccccCchhhhhHHHHHHHHhcC
Confidence 466667777755544 5555553 4555433 344555665444 567999987652 33444444 5
Q ss_pred ccEEEEce
Q psy17541 594 VSKVIIGA 601 (717)
Q Consensus 594 VdkVLLGA 601 (717)
+|.+|+-+
T Consensus 80 ~Dliv~a~ 87 (209)
T 1meo_A 80 IDIVCLAG 87 (209)
T ss_dssp CCEEEEES
T ss_pred CCEEEEcc
Confidence 78877654
No 362
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=31.80 E-value=1.9e+02 Score=29.55 Aligned_cols=100 Identities=9% Similarity=0.081 Sum_probs=55.5
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc---------hHHHHHhh-----
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL---------SAVSYIMR----- 592 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D---------SAVsyiM~----- 592 (717)
.+++|-|-+..+..++......|. +|++.+ |.+.+...+ +...|..+..++. ..+-..+.
T Consensus 103 ~i~~t~g~~~al~~~~~~~~~~gd--~Vl~~~--p~~~~~~~~--~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 176 (413)
T 3t18_A 103 SAIATPGGTGAIRSAIFSYLDEGD--PLICHD--YYWAPYRKI--CEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRD 176 (413)
T ss_dssp EEEEESHHHHHHHHHHHHHCCSSC--EEEEES--SCCTHHHHH--HHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHH
T ss_pred cEEEcCccHHHHHHHHHHhcCCCC--EEEECC--CCcccHHHH--HHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhc
Confidence 577777777776666665544443 455543 666664322 3346888777763 12333333
Q ss_pred hccEEEEceee-EecCCCeecccchHHHHHHHH------hCCCcEEe
Q psy17541 593 EVSKVIIGAHA-LLSNGAVMSRAGTAQVSLVAR------AFNVPVLA 632 (717)
Q Consensus 593 ~VdkVLLGAda-VlaNG~VvNKiGT~~VALaAK------~~~VPVyV 632 (717)
+...+++=..- --..|.++..---..++-+|+ .|++.|++
T Consensus 177 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~ 223 (413)
T 3t18_A 177 SDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIV 223 (413)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEE
Confidence 23323332211 134577776666566777777 78877665
No 363
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=31.79 E-value=1.5e+02 Score=30.28 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=35.0
Q ss_pred hccCCCeEEEecCchHHHH-HHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 522 KLANDDVILTYGCSSLVEK-ILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~-vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
.+..|++||++|.|+.|-. ++..|+..|- +||++++++.. +.+++.| |.+..+-
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga--~Vi~~~~~~~~--~~~~~~~---ga~~v~~ 210 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGMGA--KVIAVVNRTAA--TEFVKSV---GADIVLP 210 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSGGG--HHHHHHH---TCSEEEE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHH--HHHHHhc---CCcEEec
Confidence 3678999999999655543 4445555564 89998887643 3455544 6655443
No 364
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=31.74 E-value=83 Score=35.45 Aligned_cols=63 Identities=16% Similarity=0.170 Sum_probs=47.3
Q ss_pred HhhccCCCeEEEecCchHHHHHHHHHHH-----c--C----------------------------CeeEEEEcCCCCchh
Q psy17541 520 HNKLANDDVILTYGCSSLVEKILLTAHE-----K--G----------------------------TKFRVIIVDGSPWYE 564 (717)
Q Consensus 520 ~e~I~dGdvILTyg~SStV~~vL~~A~e-----~--G----------------------------k~FrVIVvESRP~~E 564 (717)
..+.++|-++.||+....|.+.|..|-- . | ..++|+|+-+- .-
T Consensus 206 ~~~~~~g~~~~t~~~~~~vr~~L~~aGf~v~~~~~~g~krem~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG--ia 283 (676)
T 3ps9_A 206 ARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGG--IA 283 (676)
T ss_dssp HHHEEEEEEEEESCCCHHHHHHHHHHTCEEEEEECSTTCCEEEEEECCSCCCCCCSCGGGCCCCCSCCEEEEECCS--HH
T ss_pred HHHhCCCCEEEeccCcHHHHHHHHhCCeEEEeccccccchhhhheeccccccccccCCcccCccCCCCCEEEECCC--HH
Confidence 3467889999999999999999987630 0 0 11466666653 45
Q ss_pred HHHHHHHHHhCCCcEEEEcc
Q psy17541 565 GKEMLRRLVKHQVDCSYVLL 584 (717)
Q Consensus 565 Gr~lA~~L~~~GI~vTyI~D 584 (717)
|..+|..|.+.|++|+++--
T Consensus 284 GlsaA~~La~~G~~V~vlEk 303 (676)
T 3ps9_A 284 SALLSLALLRRGWQVTLYCA 303 (676)
T ss_dssp HHHHHHHHHTTTCEEEEEES
T ss_pred HHHHHHHHHHCCCeEEEEeC
Confidence 78899999999999999863
No 365
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=31.70 E-value=1.4e+02 Score=30.37 Aligned_cols=87 Identities=23% Similarity=0.232 Sum_probs=56.2
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhH---HHHHHHHHhCCCcEEEEcchHHHHHhh--hccEEEEcee
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEG---KEMLRRLVKHQVDCSYVLLSAVSYIMR--EVSKVIIGAH 602 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EG---r~lA~~L~~~GI~vTyI~DSAVsyiM~--~VdkVLLGAd 602 (717)
++|+.|... +...|+.|...|-. +||+++. |.+.| ..+++.|.+ +++ ..|.||+|+.
T Consensus 60 ~av~~G~~~-~~~~lr~ala~GaD-~vi~v~d-~~~~~~~~~~~a~~La~---------------~i~~~~~dlVl~G~~ 121 (264)
T 1o97_C 60 VVVSVGPDR-VDESLRKCLAKGAD-RAVRVWD-DAAEGSDAIVVGRILTE---------------VIKKEAPDMVFAGVQ 121 (264)
T ss_dssp EEEEESCGG-GHHHHHHHHHTTCS-EEEEECC-GGGTTCCHHHHHHHHHH---------------HHHHHCCSEEEEESC
T ss_pred EEEEeCchh-HHHHHHHHHhcCCC-EEEEEcC-cccccCCHHHHHHHHHH---------------HHHhcCCCEEEEcCC
Confidence 577888644 46778887766655 6777774 44443 334444432 222 4799999999
Q ss_pred eEecCCCeecccchHHHHHHHHhCCCcEEecccCCcc
Q psy17541 603 ALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHKF 639 (717)
Q Consensus 603 aVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyKF 639 (717)
++-.+|. ....++|...++|.+--|-...+
T Consensus 122 s~d~~~~-------~v~p~lA~~L~~~~vt~v~~l~~ 151 (264)
T 1o97_C 122 SSDQAYA-------STGISVASYLNWPHAAVVADLQY 151 (264)
T ss_dssp CTTTCCC-------CHHHHHHHHHTCCEEEEEEEEEC
T ss_pred ccCCchh-------hHHHHHHHHhCCCcccceEEEEE
Confidence 8854443 33568899999999976644433
No 366
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=31.43 E-value=1e+02 Score=31.77 Aligned_cols=54 Identities=19% Similarity=0.145 Sum_probs=34.0
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
.+..|++||++|.+.+=..++..|+..|- +||+++..+. -+.++ .+.|.+..+-
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga--~Vi~~~~~~~--~~~~~---~~lGa~~vi~ 239 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGA--EVIVTSSSRE--KLDRA---FALGADHGIN 239 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTC--EEEEEESCHH--HHHHH---HHHTCSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEecCch--hHHHH---HHcCCCEEEc
Confidence 36789999999955443444455555564 8999887653 23344 4457765554
No 367
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=31.31 E-value=86 Score=32.01 Aligned_cols=19 Identities=21% Similarity=0.270 Sum_probs=15.2
Q ss_pred HHHHHHhCCCcEEecccCC
Q psy17541 619 VSLVARAFNVPVLAACETH 637 (717)
Q Consensus 619 VALaAK~~~VPVyV~cEty 637 (717)
.+++|+..+||++.+...+
T Consensus 136 ~~~~a~~~giP~v~~~~~~ 154 (398)
T 4fzr_A 136 GPLVAATLGIPWIEQSIRL 154 (398)
T ss_dssp HHHHHHHHTCCEEEECCSS
T ss_pred HHHHHHhhCCCEEEeccCC
Confidence 5678899999999877654
No 368
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=31.05 E-value=2.6e+02 Score=27.16 Aligned_cols=100 Identities=11% Similarity=0.112 Sum_probs=62.7
Q ss_pred cCCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh-----
Q psy17541 524 ANDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR----- 592 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~----- 592 (717)
.++.+||+.|-|+-+-..|.. ..+.| .+|+++..|.......+...|.+.|-.+.++. | .++..++.
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQG--WRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 457788888888776555544 34445 56888777766666677888888887777663 2 23444444
Q ss_pred --hccEEEEceeeEecCCC-------------eecccchHHHHHHHHh
Q psy17541 593 --EVSKVIIGAHALLSNGA-------------VMSRAGTAQVSLVARA 625 (717)
Q Consensus 593 --~VdkVLLGAdaVlaNG~-------------VvNKiGT~~VALaAK~ 625 (717)
++|.||.-|-.....+. -+|-.|++.+.-.+..
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 149 (272)
T 4e3z_A 102 FGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVR 149 (272)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 57888877643322221 1466777776655443
No 369
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=31.05 E-value=1.2e+02 Score=25.27 Aligned_cols=78 Identities=18% Similarity=0.172 Sum_probs=43.6
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHH--HHh-hhccEEEEceeeEecCCCeecccchHHHHHHHHh--
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVS--YIM-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA-- 625 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVs--yiM-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~-- 625 (717)
..+|+|+|..|... ..+...|. .|..|....+..-+ .+- ...|.||+..+- .+ .-|.-.+..+-+.
T Consensus 4 ~~~ilivdd~~~~~-~~l~~~l~-~~~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~~ 74 (133)
T 3nhm_A 4 KPKVLIVENSWTMR-ETLRLLLS-GEFDCTTAADGASGLQQALAHPPDVLISDVNM--DG-----MDGYALCGHFRSEPT 74 (133)
T ss_dssp -CEEEEECSCHHHH-HHHHHHHT-TTSEEEEESSHHHHHHHHHHSCCSEEEECSSC--SS-----SCHHHHHHHHHHSTT
T ss_pred CCEEEEEcCCHHHH-HHHHHHHh-CCcEEEEECCHHHHHHHHhcCCCCEEEEeCCC--CC-----CCHHHHHHHHHhCCc
Confidence 45777887766543 22333444 77777766654322 222 247888887643 22 2244444444443
Q ss_pred -CCCcEEecccCC
Q psy17541 626 -FNVPVLAACETH 637 (717)
Q Consensus 626 -~~VPVyV~cEty 637 (717)
.++||++++...
T Consensus 75 ~~~~pii~~s~~~ 87 (133)
T 3nhm_A 75 LKHIPVIFVSGYA 87 (133)
T ss_dssp TTTCCEEEEESCC
T ss_pred cCCCCEEEEeCCC
Confidence 379999988654
No 370
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=31.01 E-value=1.2e+02 Score=30.66 Aligned_cols=19 Identities=16% Similarity=0.200 Sum_probs=14.8
Q ss_pred HHHHHHhCCCcEEecccCC
Q psy17541 619 VSLVARAFNVPVLAACETH 637 (717)
Q Consensus 619 VALaAK~~~VPVyV~cEty 637 (717)
..++|+..++|+++....+
T Consensus 143 ~~~aa~~~giP~v~~~~~~ 161 (412)
T 3otg_A 143 AGLAALKAGIPTICHGVGR 161 (412)
T ss_dssp HHHHHHHHTCCEEEECCSC
T ss_pred HHHHHHHcCCCEEEecccc
Confidence 4578899999999876554
No 371
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=30.78 E-value=1.3e+02 Score=29.52 Aligned_cols=99 Identities=17% Similarity=0.202 Sum_probs=59.1
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh------
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR------ 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~------ 592 (717)
.|.+||+.|-|+-+-..|.. ..+.| .+|++++.++......++..|...|.++.++. | .++..++.
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRG--CKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788888888776555544 44455 57888776654334556777888887776653 3 23333333
Q ss_pred -hccEEEEceeeEecCCCe-------------ecccchHHHHHHHHhC
Q psy17541 593 -EVSKVIIGAHALLSNGAV-------------MSRAGTAQVSLVARAF 626 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~V-------------vNKiGT~~VALaAK~~ 626 (717)
++|.||--|-. ...|.+ +|-.|++.+.-++..+
T Consensus 106 g~iD~lv~~Ag~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 152 (283)
T 1g0o_A 106 GKLDIVCSNSGV-VSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 152 (283)
T ss_dssp SCCCEEEECCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCc-CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46777766532 222221 3567777777666554
No 372
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=30.72 E-value=1.5e+02 Score=28.02 Aligned_cols=75 Identities=15% Similarity=0.213 Sum_probs=43.7
Q ss_pred EEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEE-ceeeEecCCCeec--ccchHHHHHH-HHhC
Q psy17541 554 VIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--VSYIMR-EVSKVII-GAHALLSNGAVMS--RAGTAQVSLV-ARAF 626 (717)
Q Consensus 554 VIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--VsyiM~-~VdkVLL-GAdaVlaNG~VvN--KiGT~~VALa-AK~~ 626 (717)
|.|+|--..+ ...+++.|.+.|+.+.++.... +..+.. ++|.+|| |.- |+... ..|-. ..++ +-..
T Consensus 4 i~iid~~~s~-~~~~~~~l~~~G~~~~v~~~~~~~~~~~~~~~~dglil~gG~-----~~~~~~~~~~~~-~~~i~~~~~ 76 (195)
T 1qdl_B 4 TLIIDNYDSF-VYNIAQIVGELGSYPIVIRNDEISIKGIERIDPDRLIISPGP-----GTPEKREDIGVS-LDVIKYLGK 76 (195)
T ss_dssp EEEEECSCSS-HHHHHHHHHHTTCEEEEEETTTSCHHHHHHHCCSEEEECCCS-----SCTTSHHHHTTH-HHHHHHHTT
T ss_pred EEEEECCCch-HHHHHHHHHhCCCEEEEEeCCCCCHHHHhhCCCCEEEECCCC-----CChhhhhhhhHH-HHHHHHhcC
Confidence 6667744443 3577889999999999988653 223332 5898888 541 11111 12322 1222 1256
Q ss_pred CCcEEeccc
Q psy17541 627 NVPVLAACE 635 (717)
Q Consensus 627 ~VPVyV~cE 635 (717)
++||+-+|-
T Consensus 77 ~~PvLGIC~ 85 (195)
T 1qdl_B 77 RTPILGVCL 85 (195)
T ss_dssp TSCEEEETH
T ss_pred CCcEEEEeh
Confidence 899997763
No 373
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=30.63 E-value=1.5e+02 Score=25.41 Aligned_cols=80 Identities=8% Similarity=0.057 Sum_probs=0.0
Q ss_pred CCeeEEEEcCCCCchhHHHHHHHHHhCCC--cEEEEcchHHHHHhhh------------ccEEEEceeeEecCCCeeccc
Q psy17541 549 GTKFRVIIVDGSPWYEGKEMLRRLVKHQV--DCSYVLLSAVSYIMRE------------VSKVIIGAHALLSNGAVMSRA 614 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr~lA~~L~~~GI--~vTyI~DSAVsyiM~~------------VdkVLLGAdaVlaNG~VvNKi 614 (717)
...++|+|+|..|...-. +...|...|. .|....+..-+.-+-+ .|.||+..+---.||
T Consensus 2 ~~~~~ILivddd~~~~~~-l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g------ 74 (152)
T 3heb_A 2 SLSVTIVMIEDDLGHARL-IEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTG------ 74 (152)
T ss_dssp ---CEEEEECCCHHHHHH-HHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBH------
T ss_pred CCCceEEEEeCCHHHHHH-HHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcH------
Q ss_pred chHHHHHHHHh----CCCcEEecccCC
Q psy17541 615 GTAQVSLVARA----FNVPVLAACETH 637 (717)
Q Consensus 615 GT~~VALaAK~----~~VPVyV~cEty 637 (717)
..++-.-+. .++||++++...
T Consensus 75 --~~~~~~lr~~~~~~~~pii~~t~~~ 99 (152)
T 3heb_A 75 --IDILKLVKENPHTRRSPVVILTTTD 99 (152)
T ss_dssp --HHHHHHHHHSTTTTTSCEEEEESCC
T ss_pred --HHHHHHHHhcccccCCCEEEEecCC
No 374
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=30.54 E-value=3.1e+02 Score=24.98 Aligned_cols=89 Identities=11% Similarity=0.045 Sum_probs=53.9
Q ss_pred HHHhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-chH-HHHHh---h
Q psy17541 518 FFHNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-LSA-VSYIM---R 592 (717)
Q Consensus 518 ~A~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-DSA-VsyiM---~ 592 (717)
.+.+.|.+...|..+|.++.-. -+..++..|...|++|.++. +.. +...+ .
T Consensus 31 ~~~~~i~~a~~I~i~G~G~S~~------------------------~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 86 (187)
T 3sho_A 31 AAVEAICRADHVIVVGMGFSAA------------------------VAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLR 86 (187)
T ss_dssp HHHHHHHHCSEEEEECCGGGHH------------------------HHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCC
T ss_pred HHHHHHHhCCEEEEEecCchHH------------------------HHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCC
Confidence 3444555567788887654311 11234566677889998888 332 22222 3
Q ss_pred hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccCC
Q psy17541 593 EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
+=|.||+ |...|.- .-+..++-.|+..|+|+++++...
T Consensus 87 ~~d~~i~----iS~sG~t---~~~~~~~~~ak~~g~~vi~IT~~~ 124 (187)
T 3sho_A 87 PTDLMIG----VSVWRYL---RDTVAALAGAAERGVPTMALTDSS 124 (187)
T ss_dssp TTEEEEE----ECCSSCC---HHHHHHHHHHHHTTCCEEEEESCT
T ss_pred CCCEEEE----EeCCCCC---HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 3455443 3345533 446778889999999999988643
No 375
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=30.49 E-value=1.6e+02 Score=29.58 Aligned_cols=68 Identities=13% Similarity=0.123 Sum_probs=47.9
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEce
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGA 601 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGA 601 (717)
.|.+|+.+|.+..=..+...++..|. +|++.+-+|.. +..+.+.|+. ++....+..++.++|.|++-+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~--~V~~~dr~~~~-----~~~~~~~g~~--~~~~~~l~~~l~~aDvVi~~~ 221 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGA--KVKVGARESDL-----LARIAEMGME--PFHISKAAQELRDVDVCINTI 221 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSHHH-----HHHHHHTTSE--EEEGGGHHHHTTTCSEEEECC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC--EEEEEECCHHH-----HHHHHHCCCe--ecChhhHHHHhcCCCEEEECC
Confidence 57899999999887777777766664 78888866532 2234456765 333345677788999999876
No 376
>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protei; structural genomics, structural genomics consortium, unknown function; 2.00A {Homo sapiens}
Probab=30.48 E-value=1.3e+02 Score=30.30 Aligned_cols=92 Identities=16% Similarity=0.206 Sum_probs=54.8
Q ss_pred EecCchHHH-HHHHHHHHcCCeeEEEEc---CCCCchh---HHHHHHHHHhCCCcEEEEcchHHHHHhh----hccEEEE
Q psy17541 531 TYGCSSLVE-KILLTAHEKGTKFRVIIV---DGSPWYE---GKEMLRRLVKHQVDCSYVLLSAVSYIMR----EVSKVII 599 (717)
Q Consensus 531 Tyg~SStV~-~vL~~A~e~Gk~FrVIVv---ESRP~~E---Gr~lA~~L~~~GI~vTyI~DSAVsyiM~----~VdkVLL 599 (717)
..+.+|--. .+|.. .|..|.|+.. |+....+ -..++.+|+...- .++..-+. .-+.+||
T Consensus 7 ILAS~SPrR~eLL~~---~Gi~f~v~~~~iDE~~~~~~~~~p~~~v~~lA~~KA-------~av~~~~~~~~~~~~~~VI 76 (230)
T 2p5x_A 7 VLASASPRRQEILSN---AGLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKA-------LEVANRLYQKDLRAPDVVI 76 (230)
T ss_dssp EECCCCHHHHHHHHH---TTCCCEECCCCCCCCCCGGGSSSHHHHHHHHHHHHH-------HHHHHHHHHHHSCCCSEEE
T ss_pred EEeCCCHHHHHHHHH---CCCCeEEeCCCCCCCCCccccCCHHHHHHHHHHHHH-------HHHHHHhhhhccCCCCEEE
Confidence 344443333 44444 3899999854 4433332 3567777765431 12222221 1245899
Q ss_pred ceeeEec-CCCeecccchHHHH--HHHHhCCCcEEe
Q psy17541 600 GAHALLS-NGAVMSRAGTAQVS--LVARAFNVPVLA 632 (717)
Q Consensus 600 GAdaVla-NG~VvNKiGT~~VA--LaAK~~~VPVyV 632 (717)
|||.|+. ||.++.|-.+..-| |+..-.|....|
T Consensus 77 gaDTvV~~dg~IlgKP~d~eeA~~mL~~lSG~~h~V 112 (230)
T 2p5x_A 77 GADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSV 112 (230)
T ss_dssp EEEEEEEETTEEECCCSSHHHHHHHHHHHTTSEEEE
T ss_pred EeCeEEEECCEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence 9999986 99999999998766 566655655433
No 377
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.45 E-value=1.6e+02 Score=28.94 Aligned_cols=110 Identities=14% Similarity=0.086 Sum_probs=59.7
Q ss_pred cCCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHh-CCCcEEEE--cc----hHHHHHhhhcc
Q psy17541 524 ANDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVK-HQVDCSYV--LL----SAVSYIMREVS 595 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~-~GI~vTyI--~D----SAVsyiM~~Vd 595 (717)
..|.+||+.|-+.-|-..|. .+.+.| .+|+++.-.+. ....+...+.. .+-.++++ .| .++..++.++|
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g--~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d 85 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHG--YKVRGTARSAS-KLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA 85 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSHH-HHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCC--CEEEEEeCCcc-cHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCC
Confidence 45678999998877655544 444455 46776654332 22233333322 23345555 23 23445556677
Q ss_pred EEEEceeeEecCCC-----eecccchHHHHHHHH-hCCCcEEecccC
Q psy17541 596 KVIIGAHALLSNGA-----VMSRAGTAQVSLVAR-AFNVPVLAACET 636 (717)
Q Consensus 596 kVLLGAdaVlaNG~-----VvNKiGT~~VALaAK-~~~VPVyV~cEt 636 (717)
.||--|-....+.. -+|-.||..+.-+|. ..++.-+|...+
T Consensus 86 ~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 86 GVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp EEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred EEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 77665532211111 136689999998887 466665554443
No 378
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=30.42 E-value=2.1e+02 Score=29.59 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=51.7
Q ss_pred ccCCCeEEEecCchHH-HHHHHHHHHcC----C-------eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc------
Q psy17541 523 LANDDVILTYGCSSLV-EKILLTAHEKG----T-------KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL------ 584 (717)
Q Consensus 523 I~dGdvILTyg~SStV-~~vL~~A~e~G----k-------~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D------ 584 (717)
+....+++|.|.+..+ ..++..+...+ + .-+|+|. .|.+.+...+ +...|+.+..++.
T Consensus 91 ~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~--~p~y~~~~~~--~~~~g~~~~~v~~~~~g~d 166 (422)
T 3d6k_A 91 LPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCP--VPGYDRHFTI--TEHFGFEMINVPMTDEGPD 166 (422)
T ss_dssp CCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEE--ESCCHHHHHH--HHHHTCEEEEEEEETTEEC
T ss_pred CChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEe--CCccHHHHHH--HHHcCCEEEecCCCCCCCC
Confidence 4444688888887765 25555554332 1 1245554 3667665433 3345887777653
Q ss_pred -hHHHHHhh--hccEEEEceeeEecCCCeecccchHHHHHHHH-hCCCcEEe
Q psy17541 585 -SAVSYIMR--EVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR-AFNVPVLA 632 (717)
Q Consensus 585 -SAVsyiM~--~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK-~~~VPVyV 632 (717)
.++-..+. ++..|++=..-=-..|.++..-==-.++-+|+ +|++.|++
T Consensus 167 ~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~ 218 (422)
T 3d6k_A 167 MGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVW 218 (422)
T ss_dssp HHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEE
T ss_pred HHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEE
Confidence 22333333 22233211111111243333222235666777 88886654
No 379
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=30.41 E-value=3.1e+02 Score=29.09 Aligned_cols=70 Identities=14% Similarity=0.241 Sum_probs=45.6
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEce
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGA 601 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGA 601 (717)
.|.+|+.+|.+..-..++..+...|.. +|++++..+.. ...++..+ |.. ++....+..++..+|.||...
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~-~V~v~~r~~~r-a~~la~~~---g~~--~~~~~~l~~~l~~aDvVi~at 235 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVR-AVLVANRTYER-AVELARDL---GGE--AVRFDELVDHLARSDVVVSAT 235 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCS-EEEEECSSHHH-HHHHHHHH---TCE--ECCGGGHHHHHHTCSEEEECC
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCC-EEEEEeCCHHH-HHHHHHHc---CCc--eecHHhHHHHhcCCCEEEEcc
Confidence 689999999988767777777666631 67887754421 12445544 554 333345666678899998763
No 380
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=30.27 E-value=1.1e+02 Score=28.87 Aligned_cols=75 Identities=11% Similarity=0.115 Sum_probs=39.6
Q ss_pred EEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch----HHHHHhhhcc---EEEEceeeEecCCCeecccchHHHHHHHHh
Q psy17541 553 RVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS----AVSYIMREVS---KVIIGAHALLSNGAVMSRAGTAQVSLVARA 625 (717)
Q Consensus 553 rVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS----AVsyiM~~Vd---kVLLGAdaVlaNG~VvNKiGT~~VALaAK~ 625 (717)
+|.|+|---. =-..+++.|.+.|++++++... .+...+...+ .||.|--.. ....|-....+-+-.
T Consensus 2 ~i~iiDn~~s-~~~~i~~~l~~~G~~~~v~~~~~~~~~i~~~l~~~~~~~iil~gGpg~------~~~~~~~~~l~~~~~ 74 (192)
T 1i1q_B 2 DILLLDNIDS-FTWNLADQLRTNGHNVVIYRNHIPAQTLIDRLATMKNPVLMLSPGPGV------PSEAGCMPELLTRLR 74 (192)
T ss_dssp EEEEEECSCS-SHHHHHHHHHHTTCEEEEEETTSCSHHHHHHHTTCSSEEEEECCCSSC------GGGSTTHHHHHHHHB
T ss_pred cEEEEECCcc-HHHHHHHHHHHCCCeEEEEECCCCHHHHHHHhhhccCCeEEECCCCcC------chhCchHHHHHHHHh
Confidence 4666661111 1246788999999999988854 2322333233 555553222 122333222222234
Q ss_pred CCCcEEecc
Q psy17541 626 FNVPVLAAC 634 (717)
Q Consensus 626 ~~VPVyV~c 634 (717)
.++||+=+|
T Consensus 75 ~~~PilGIC 83 (192)
T 1i1q_B 75 GKLPIIGIC 83 (192)
T ss_dssp TTBCEEEET
T ss_pred cCCCEEEEC
Confidence 689999665
No 381
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=30.13 E-value=27 Score=33.27 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=41.9
Q ss_pred EEEEcCCCCchhH--HHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCeecccchHH----HHHHHHhC
Q psy17541 553 RVIIVDGSPWYEG--KEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQ----VSLVARAF 626 (717)
Q Consensus 553 rVIVvESRP~~EG--r~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~----VALaAK~~ 626 (717)
+|.|+|- .-| +.+++.|.+.|++++++.+.. .+..+|.||| .-|+-....+-.. +.-.+.+.
T Consensus 4 ~I~iiD~---g~~n~~si~~al~~~G~~~~v~~~~~---~l~~~D~lil------PG~g~~~~~~~~~~~~~~i~~~~~~ 71 (211)
T 4gud_A 4 NVVIIDT---GCANISSVKFAIERLGYAVTISRDPQ---VVLAADKLFL------PGVGTASEAMKNLTERDLIELVKRV 71 (211)
T ss_dssp CEEEECC---CCTTHHHHHHHHHHTTCCEEEECCHH---HHHHCSEEEE------CCCSCHHHHHHHHHHTTCHHHHHHC
T ss_pred EEEEEEC---CCChHHHHHHHHHHCCCEEEEECCHH---HHhCCCEEEE------CCCCCHHHHHHHHHhcChHHHHHHc
Confidence 4566663 223 567889999999999887743 3566787765 2222211111111 12345568
Q ss_pred CCcEEeccc
Q psy17541 627 NVPVLAACE 635 (717)
Q Consensus 627 ~VPVyV~cE 635 (717)
++||+=+|=
T Consensus 72 ~~PvlGICl 80 (211)
T 4gud_A 72 EKPLLGICL 80 (211)
T ss_dssp CSCEEEETH
T ss_pred CCCEEEEch
Confidence 999997663
No 382
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=30.05 E-value=1.3e+02 Score=25.29 Aligned_cols=84 Identities=14% Similarity=0.089 Sum_probs=44.5
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHH-hC
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--VSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR-AF 626 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--VsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK-~~ 626 (717)
..+|+|+|..|... ..+...|...|+.|....+.. +..+-. ..|.||+..+. ..+.....-|-..+..+-+ ..
T Consensus 3 ~~~ilivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~~--~~~~~~~~~g~~~~~~l~~~~~ 79 (140)
T 2qr3_A 3 LGTIIIVDDNKGVL-TAVQLLLKNHFSKVITLSSPVSLSTVLREENPEVVLLDMNF--TSGINNGNEGLFWLHEIKRQYR 79 (140)
T ss_dssp CCEEEEECSCHHHH-HHHHHHHTTTSSEEEEECCHHHHHHHHHHSCEEEEEEETTT--TC-----CCHHHHHHHHHHHCT
T ss_pred CceEEEEeCCHHHH-HHHHHHHHhCCcEEEEeCCHHHHHHHHHcCCCCEEEEeCCc--CCCCCCCccHHHHHHHHHhhCc
Confidence 35777887765432 345566777788777655432 222222 47888886542 1000001123333333333 35
Q ss_pred CCcEEecccCC
Q psy17541 627 NVPVLAACETH 637 (717)
Q Consensus 627 ~VPVyV~cEty 637 (717)
++||++++...
T Consensus 80 ~~~ii~ls~~~ 90 (140)
T 2qr3_A 80 DLPVVLFTAYA 90 (140)
T ss_dssp TCCEEEEEEGG
T ss_pred CCCEEEEECCC
Confidence 89999987654
No 383
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=29.99 E-value=68 Score=32.26 Aligned_cols=94 Identities=16% Similarity=0.093 Sum_probs=56.0
Q ss_pred CeEEEecCc-h------HHHHHHHHHHHcCCeeEEEEcCCCCchhH-HHHHHHHHhCCCcEEE---EcchHHHHHhhhcc
Q psy17541 527 DVILTYGCS-S------LVEKILLTAHEKGTKFRVIIVDGSPWYEG-KEMLRRLVKHQVDCSY---VLLSAVSYIMREVS 595 (717)
Q Consensus 527 dvILTyg~S-S------tV~~vL~~A~e~Gk~FrVIVvESRP~~EG-r~lA~~L~~~GI~vTy---I~DSAVsyiM~~Vd 595 (717)
.+|+..|+- . .+..++....+.+..++++++-..|. +. +.++..| .-.+.+ +.+..+..+|..+|
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~---~~~v~~~g~~~~~~~~~~~~~ad 284 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDL---AGHLRFLGQVDDATKASAMRSAD 284 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGG---GGGEEECCSCCHHHHHHHHHHSS
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhc---cCcEEEEecCCHHHHHHHHHHCC
Confidence 467777876 2 33444455544556788888877665 21 2223333 223333 44567789999999
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
.+|+-... .. |.-...+=|-.+|+||++.
T Consensus 285 v~v~ps~~--~e-------~~~~~~~Ea~a~G~PvI~~ 313 (406)
T 2gek_A 285 VYCAPHLG--GE-------SFGIVLVEAMAAGTAVVAS 313 (406)
T ss_dssp EEEECCCS--CC-------SSCHHHHHHHHHTCEEEEC
T ss_pred EEEecCCC--CC-------CCchHHHHHHHcCCCEEEe
Confidence 99876310 11 2223456677789999984
No 384
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=29.93 E-value=1.4e+02 Score=29.84 Aligned_cols=100 Identities=19% Similarity=0.241 Sum_probs=58.0
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch----------HHHHHhh-hc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS----------AVSYIMR-EV 594 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS----------AVsyiM~-~V 594 (717)
..+++|.|-+..+..++......|. +|++. .|.+.|.. ..+...|..+..+... ++-..+. ++
T Consensus 82 ~~v~~~~g~~~a~~~~~~~l~~~gd--~Vl~~--~~~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~ 155 (375)
T 3op7_A 82 EQILQTNGATGANLLVLYSLIEPGD--HVISL--YPTYQQLY--DIPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTT 155 (375)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTC--EEEEE--ESSCTHHH--HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTC
T ss_pred hhEEEcCChHHHHHHHHHHhcCCCC--EEEEe--CCCchhHH--HHHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCC
Confidence 4677777777776666665543443 45543 35555532 3345678877776522 2333332 45
Q ss_pred cEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 595 SKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 595 dkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
..|++- ..-...|.++..---..|+-+|+.||+.+++
T Consensus 156 ~~v~~~-~~~nptG~~~~~~~l~~i~~la~~~~~~li~ 192 (375)
T 3op7_A 156 KMICIN-NANNPTGAVMDRTYLEELVEIASEVGAYILS 192 (375)
T ss_dssp CEEEEE-SSCTTTCCCCCHHHHHHHHHHHHTTTCEEEE
T ss_pred eEEEEc-CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 555543 2223456666544456777889999998887
No 385
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=29.88 E-value=1.2e+02 Score=30.35 Aligned_cols=71 Identities=13% Similarity=0.145 Sum_probs=41.2
Q ss_pred cCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE---EcchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHH
Q psy17541 548 KGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY---VLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR 624 (717)
Q Consensus 548 ~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy---I~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK 624 (717)
....+++++... |..+-+..++.+....=+|.+ +...-+..+|..+|.+++.+ |+ . .+=|-
T Consensus 235 ~~~~~~l~i~~g-~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~~S------g~-------~--~lEA~ 298 (384)
T 1vgv_A 235 THQDIQIVYPVH-LNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILTDS------GG-------I--QEEAP 298 (384)
T ss_dssp HCTTEEEEEECC-BCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEESS------ST-------G--GGTGG
T ss_pred hCCCeEEEEEcC-CCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhCcEEEECC------cc-------h--HHHHH
Confidence 344677776422 111123334444322125666 34456888999999987754 32 2 35677
Q ss_pred hCCCcEEecc
Q psy17541 625 AFNVPVLAAC 634 (717)
Q Consensus 625 ~~~VPVyV~c 634 (717)
.+|+||++.-
T Consensus 299 a~G~PvI~~~ 308 (384)
T 1vgv_A 299 SLGKPVLVMR 308 (384)
T ss_dssp GGTCCEEEES
T ss_pred HcCCCEEEcc
Confidence 8899999763
No 386
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=29.88 E-value=39 Score=33.80 Aligned_cols=109 Identities=12% Similarity=0.120 Sum_probs=59.7
Q ss_pred CeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEcee
Q psy17541 527 DVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--L-SAVSYIMREVSKVIIGAH 602 (717)
Q Consensus 527 dvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--D-SAVsyiM~~VdkVLLGAd 602 (717)
.+||+.|-+..|-..|. .+.+.|..++|++++-++.......+..|...++.+...- | .++..++..+|.||--|-
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 84 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA 84 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence 46888888776655444 4444543467887764432111111122222233322211 1 356677788888877653
Q ss_pred eEec-----CC---CeecccchHHHHHHHHhCCCcEEeccc
Q psy17541 603 ALLS-----NG---AVMSRAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 603 aVla-----NG---~VvNKiGT~~VALaAK~~~VPVyV~cE 635 (717)
.... +- .-+|-.||..+.-+|..+++.|+.++-
T Consensus 85 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS 125 (348)
T 1oc2_A 85 ESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVST 125 (348)
T ss_dssp CCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEE
T ss_pred ccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecc
Confidence 3211 00 124678999999999988886655543
No 387
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=29.83 E-value=69 Score=31.36 Aligned_cols=110 Identities=7% Similarity=-0.034 Sum_probs=57.5
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCc-----hhHHHHHHHHHhCCCcEEEEc----c-hHHHHHhhhccEE
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPW-----YEGKEMLRRLVKHQVDCSYVL----L-SAVSYIMREVSKV 597 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~-----~EGr~lA~~L~~~GI~vTyI~----D-SAVsyiM~~VdkV 597 (717)
.++-.||+.-|...|..-...-..-+|.++.+... .-.+...+.|...|+++..+. + ......+.++|.|
T Consensus 4 ~l~l~s~~~~~~~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I 83 (206)
T 3l4e_A 4 NLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFI 83 (206)
T ss_dssp EEEEESCGGGCHHHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEE
T ss_pred heEEeecccchHHHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEE
Confidence 35666777666666665432111235555553221 123567888999999988873 2 2233456778888
Q ss_pred EEceeeEecCCCeecccchHHHHHHHHhCCCcEE-ecccCC
Q psy17541 598 IIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVL-AACETH 637 (717)
Q Consensus 598 LLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVy-V~cEty 637 (717)
++|-=.-+.=...+...|-..+=.-+-..|+|++ +|+.+-
T Consensus 84 ~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~ 124 (206)
T 3l4e_A 84 YVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAV 124 (206)
T ss_dssp EECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHH
T ss_pred EECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHH
Confidence 7763111100112223333333222333589999 444443
No 388
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=29.69 E-value=1.2e+02 Score=29.03 Aligned_cols=99 Identities=16% Similarity=0.103 Sum_probs=57.0
Q ss_pred CCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh------
Q psy17541 525 NDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR------ 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~------ 592 (717)
.|.+||+.|-|+-+-..|. ...+.| .+|++++.+.......+..+|...|..+.++. | .++..++.
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G--~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRG--ASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4668888888876655444 444555 46777765343334566777887787776653 3 34555554
Q ss_pred -hccEEEEceeeEecCCC-------------eecccchHHHHHHHHhC
Q psy17541 593 -EVSKVIIGAHALLSNGA-------------VMSRAGTAQVSLVARAF 626 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~-------------VvNKiGT~~VALaAK~~ 626 (717)
.+|.||--|-. ...+. -+|-.|++.+.-.+..+
T Consensus 98 ~~~d~vi~~Ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 144 (274)
T 1ja9_A 98 GGLDFVMSNSGM-EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 144 (274)
T ss_dssp SCEEEEECCCCC-CCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCC-CCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46666654422 11111 13566777776655543
No 389
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=29.61 E-value=45 Score=33.17 Aligned_cols=41 Identities=17% Similarity=0.306 Sum_probs=21.4
Q ss_pred HHHHHHHHHhCCCcEEEEcchH---HHHHhhhccEEEEceeeEe
Q psy17541 565 GKEMLRRLVKHQVDCSYVLLSA---VSYIMREVSKVIIGAHALL 605 (717)
Q Consensus 565 Gr~lA~~L~~~GI~vTyI~DSA---VsyiM~~VdkVLLGAdaVl 605 (717)
|+.+++.|.+.|+++.++.... .-.-+.++|.||.+.|.-+
T Consensus 24 ~~~v~~al~~~g~~v~~i~~~~~~~~~~~~~~~D~v~~~~~~~~ 67 (307)
T 3r5x_A 24 GNEMIANLDKNKYEIVPITLNEKMDLIEKAKDIDFALLALHGKY 67 (307)
T ss_dssp HHHHHHHSCTTTEEEEEEECSSGGGHHHHTTTCSEEEECCCSHH
T ss_pred HHHHHHHHHHCCCEEEEEcccCchhHHHhccCCCEEEEeCCCCC
Confidence 4455555555555555554321 1112346788887765543
No 390
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=29.60 E-value=1.3e+02 Score=33.34 Aligned_cols=94 Identities=16% Similarity=0.056 Sum_probs=57.3
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceee
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAda 603 (717)
.+..|..+|-..+-...|.. +++.| ++|.+.|.++... +...|.+.||++.+-.+.. .+...+|.|+++.-
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G--~~V~~sD~~~~~~---~~~~L~~~gi~~~~G~~~~--~~~~~~d~vV~Spg- 89 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALG--HTVTGSDANIYPP---MSTQLEQAGVTIEEGYLIA--HLQPAPDLVVVGNA- 89 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCCTT---HHHHHHHTTCEEEESCCGG--GGCSCCSEEEECTT-
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCC--CEEEEECCCCCcH---HHHHHHHCCCEEECCCCHH--HcCCCCCEEEECCC-
Confidence 45678888777654544443 33334 6899999987543 4568888999887543322 23346788876641
Q ss_pred EecCCCeecccchHHHHHHHHhCCCcEEeccc
Q psy17541 604 LLSNGAVMSRAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 604 VlaNG~VvNKiGT~~VALaAK~~~VPVyV~cE 635 (717)
|-. +.+.-..|++.|+||+=-.|
T Consensus 90 i~~---------~~p~l~~a~~~gi~v~~~~e 112 (524)
T 3hn7_A 90 MKR---------GMDVIEYMLDTGLRYTSGPQ 112 (524)
T ss_dssp CCT---------TSHHHHHHHHHTCCEEEHHH
T ss_pred cCC---------CCHHHHHHHHCCCcEEEHHH
Confidence 211 23444667778888874333
No 391
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=29.56 E-value=1e+02 Score=31.60 Aligned_cols=52 Identities=15% Similarity=0.087 Sum_probs=32.9
Q ss_pred CCCeEEEec-CchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc
Q psy17541 525 NDDVILTYG-CSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL 583 (717)
Q Consensus 525 dGdvILTyg-~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~ 583 (717)
.|++||++| .+.+=..++..|+..|- +||++++++. -+.++++ .|.+..+-.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga--~Vi~~~~~~~--~~~~~~~---lGa~~vi~~ 202 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL--RVITTASRNE--TIEWTKK---MGADIVLNH 202 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEECCSHH--HHHHHHH---HTCSEEECT
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC--EEEEEeCCHH--HHHHHHh---cCCcEEEEC
Confidence 799999995 44443445555655564 8999988653 2344444 576655443
No 392
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=29.54 E-value=1e+02 Score=31.65 Aligned_cols=100 Identities=12% Similarity=0.199 Sum_probs=51.7
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH------HHH---Hhh-hcc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA------VSY---IMR-EVS 595 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA------Vsy---iM~-~Vd 595 (717)
..+++|.|.+..+..++..+...|. +|++. .|.+.|... .+...|+.+..+.... +.. .+. ++.
T Consensus 103 ~~v~~~~g~t~a~~~~~~~~~~~gd--~Vl~~--~~~~~~~~~--~~~~~g~~~~~v~~~~~~~~~~~~~l~~~l~~~~~ 176 (409)
T 2gb3_A 103 ENVLVTNGGSEAILFSFAVIANPGD--EILVL--EPFYANYNA--FAKIAGVKLIPVTRRMEEGFAIPQNLESFINERTK 176 (409)
T ss_dssp GGEEEESHHHHHHHHHHHHHCCTTC--EEEEE--ESCCTHHHH--HHHHHTCEEEEEECCGGGTSCCCTTGGGGCCTTEE
T ss_pred HHEEEeCCHHHHHHHHHHHhCCCCC--EEEEc--CCCchhHHH--HHHHcCCEEEEeccCCCCCCccHHHHHHhhCcCCe
Confidence 4678888877777766666543343 45554 355555433 2344688777776321 111 111 223
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.|++. ..-...|.++..-=-..|+-+|+.+|++|++
T Consensus 177 ~v~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 212 (409)
T 2gb3_A 177 GIVLS-NPCNPTGVVYGKDEMRYLVEIAERHGLFLIV 212 (409)
T ss_dssp EEEEE-SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEC-CCCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 33332 1111224433321124567788899998886
No 393
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=29.43 E-value=1.4e+02 Score=26.95 Aligned_cols=97 Identities=16% Similarity=0.137 Sum_probs=54.0
Q ss_pred CCCeEEEecCch---HHHHHHHHHHHcCCeeEEEEcCCCCchhH-HHHHHHHHhCCC--cEEE---EcchHHHHHhhhcc
Q psy17541 525 NDDVILTYGCSS---LVEKILLTAHEKGTKFRVIIVDGSPWYEG-KEMLRRLVKHQV--DCSY---VLLSAVSYIMREVS 595 (717)
Q Consensus 525 dGdvILTyg~SS---tV~~vL~~A~e~Gk~FrVIVvESRP~~EG-r~lA~~L~~~GI--~vTy---I~DSAVsyiM~~Vd 595 (717)
+..+|+..|+-. -+..+ ..|+..-..++++++-..+..+- +.++..+ ..|+ .+.+ +.+..+..+|..+|
T Consensus 22 ~~~~i~~~G~~~~~Kg~~~l-i~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~-~~~l~~~v~~~g~~~~~e~~~~~~~ad 99 (177)
T 2f9f_A 22 YGDFWLSVNRIYPEKRIELQ-LEVFKKLQDEKLYIVGWFSKGDHAERYARKI-MKIAPDNVKFLGSVSEEELIDLYSRCK 99 (177)
T ss_dssp CCSCEEEECCSSGGGTHHHH-HHHHHHCTTSCEEEEBCCCTTSTHHHHHHHH-HHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred CCCEEEEEeccccccCHHHH-HHHHHhCCCcEEEEEecCccHHHHHHHHHhh-hcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence 345677777643 23333 33433324567766655554432 2333311 2233 3444 34566899999999
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEec
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAA 633 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~ 633 (717)
.+|+... ..| .| ...+=|-.+|+||++.
T Consensus 100 i~v~ps~---~e~-----~~--~~~~Eama~G~PvI~~ 127 (177)
T 2f9f_A 100 GLLCTAK---DED-----FG--LTPIEAMASGKPVIAV 127 (177)
T ss_dssp EEEECCS---SCC-----SC--HHHHHHHHTTCCEEEE
T ss_pred EEEeCCC---cCC-----CC--hHHHHHHHcCCcEEEe
Confidence 9987443 112 13 2346777889999984
No 394
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=29.43 E-value=1.5e+02 Score=25.77 Aligned_cols=81 Identities=14% Similarity=0.116 Sum_probs=48.1
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHH--HHHh-hhccEEEEceeeEecCCCeecccchHHHHHHHHh-
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAV--SYIM-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA- 625 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAV--syiM-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~- 625 (717)
+..+|+|+|..|.. ...+...|...|+.|....+..- ..+- ...|.||+..+- .++ -|--.+..+-..
T Consensus 6 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlii~D~~l--~~~-----~g~~~~~~lr~~~ 77 (154)
T 3gt7_A 6 RAGEILIVEDSPTQ-AEHLKHILEETGYQTEHVRNGREAVRFLSLTRPDLIISDVLM--PEM-----DGYALCRWLKGQP 77 (154)
T ss_dssp -CCEEEEECSCHHH-HHHHHHHHHTTTCEEEEESSHHHHHHHHTTCCCSEEEEESCC--SSS-----CHHHHHHHHHHST
T ss_pred CCCcEEEEeCCHHH-HHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCCCCEEEEeCCC--CCC-----CHHHHHHHHHhCC
Confidence 45688888887654 23466677778888877665432 2222 247888887542 221 243444444333
Q ss_pred --CCCcEEecccCCc
Q psy17541 626 --FNVPVLAACETHK 638 (717)
Q Consensus 626 --~~VPVyV~cEtyK 638 (717)
.++||++++....
T Consensus 78 ~~~~~pii~~s~~~~ 92 (154)
T 3gt7_A 78 DLRTIPVILLTILSD 92 (154)
T ss_dssp TTTTSCEEEEECCCS
T ss_pred CcCCCCEEEEECCCC
Confidence 5799999886543
No 395
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=29.37 E-value=33 Score=35.07 Aligned_cols=139 Identities=12% Similarity=0.122 Sum_probs=74.3
Q ss_pred EEEcCCCCchhH-HHHHHHHHhC-CCcEEE---EcchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCC
Q psy17541 554 VIIVDGSPWYEG-KEMLRRLVKH-QVDCSY---VLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNV 628 (717)
Q Consensus 554 VIVvESRP~~EG-r~lA~~L~~~-GI~vTy---I~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~V 628 (717)
+-|+--..+|.| ..-++..++. ++|+-. |.|.-- +.+ ....|||+|+-++.++..---..+.-.|+.+|.
T Consensus 77 IsVlTd~~~F~gs~~dL~~ir~~v~lPvLrKDfi~~~~q---i~e--a~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl 151 (251)
T 1i4n_A 77 ISILTEKHYFKGDPAFVRAARNLTCRPILAKDFYIDTVQ---VKL--ASSVGADAILIIARILTAEQIKEIYEAAEELGM 151 (251)
T ss_dssp EEEECCCSSSCCCTHHHHHHHTTCCSCEEEECCCCSTHH---HHH--HHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTC
T ss_pred eEEEecccccCCCHHHHHHHHHhCCCCEEEeeCCCCHHH---HHH--HHHcCCCEEEEecccCCHHHHHHHHHHHHHcCC
Confidence 334434456666 3444444443 666542 323221 111 445799999998887776444445567888999
Q ss_pred cEEecccCCcccccc-cC-Cc-ccccccCCccccccccccccccccCCCccccccceeccCCCCccEEEeCCCCcCCCCh
Q psy17541 629 PVLAACETHKFCERV-QT-DA-LVFNELGDPNELISDKSAAKNWKSLAHLTPLSLTYDITPSHLVTAVITELAIVPCTSV 705 (717)
Q Consensus 629 PVyV~cEtyKFs~rv-~~-Ds-~v~NEl~dP~EL~~~~~~l~~~~~~~~l~vlNp~FDvTPPeLIT~IITE~GIlpPsSV 705 (717)
-++|++.+..=..+. .. +. ++..+.+|-. .+ ..++....-+...+|++. .+|+|-||.+|..+
T Consensus 152 ~~lvEv~~~eE~~~A~~l~g~~iIGinnr~l~---t~---------~~d~~~~~~l~~~ip~~~--~vIaEsGI~t~edv 217 (251)
T 1i4n_A 152 DSLVEVHSREDLEKVFSVIRPKIIGINTRDLD---TF---------EIKKNVLWELLPLVPDDT--VVVAESGIKDPREL 217 (251)
T ss_dssp EEEEEECSHHHHHHHHTTCCCSEEEEECBCTT---TC---------CBCTTHHHHHGGGSCTTS--EEEEESCCCCGGGH
T ss_pred eEEEEeCCHHHHHHHHhcCCCCEEEEeCcccc---cC---------CCCHHHHHHHHHhCCCCC--EEEEeCCCCCHHHH
Confidence 999988766421111 11 11 1222222211 10 011221112234566663 58999999999988
Q ss_pred hHHhhc
Q psy17541 706 PVVLRV 711 (717)
Q Consensus 706 pvVLR~ 711 (717)
-.+...
T Consensus 218 ~~~~~~ 223 (251)
T 1i4n_A 218 KDLRGK 223 (251)
T ss_dssp HHHTTT
T ss_pred HHHHHh
Confidence 776543
No 396
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=29.32 E-value=74 Score=29.02 Aligned_cols=73 Identities=12% Similarity=0.092 Sum_probs=35.2
Q ss_pred cCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHh------hhccEE
Q psy17541 524 ANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIM------REVSKV 597 (717)
Q Consensus 524 ~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM------~~VdkV 597 (717)
..+.+||=.|+++-. ++..+.+.+...+|+.+|-.|..-- ...+.+...|++++++...+...+- ...|.|
T Consensus 29 ~~~~~vLDiG~G~G~--~~~~l~~~~~~~~v~~vD~~~~~~~-~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i 105 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGC--IAVSIALACPGVSVTAVDLSMDALA-VARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAI 105 (215)
T ss_dssp CTTEEEEEEESSBCH--HHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHHHHHTTCCBSEE
T ss_pred CCCCEEEEecCCHhH--HHHHHHHhCCCCeEEEEECCHHHHH-HHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEE
Confidence 577899999887642 2222333345678999998775421 1122344456677777765555443 357888
Q ss_pred EE
Q psy17541 598 II 599 (717)
Q Consensus 598 LL 599 (717)
+.
T Consensus 106 ~~ 107 (215)
T 4dzr_A 106 VS 107 (215)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 397
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=29.19 E-value=1.6e+02 Score=30.84 Aligned_cols=54 Identities=15% Similarity=0.224 Sum_probs=34.3
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
.+..|++||++|-+.+=..++.-|+..|- -+||++++.+. -+.++++| |.+..+
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~--~~~~~~~l---Ga~~vi 263 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGA-SKVILSEPSEV--RRNLAKEL---GADHVI 263 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHH--HHHHHHHH---TCSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHH--HHHHHHHc---CCCEEE
Confidence 36789999999986543445555655453 17888887763 23455544 765444
No 398
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=29.10 E-value=1.9e+02 Score=29.75 Aligned_cols=54 Identities=20% Similarity=0.193 Sum_probs=34.2
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
.+..|++||++|.+.+=..++..|+..|-. +|++++..+.. +.++ .+.|.+..+
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-~Vi~~~~~~~~--~~~~---~~lGa~~vi 242 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAGAK-RIIAVDLNPDK--FEKA---KVFGATDFV 242 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCS-EEEEECSCGGG--HHHH---HHTTCCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEcCCHHH--HHHH---HHhCCceEE
Confidence 467899999999655434455556555532 78888876643 2344 456876544
No 399
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=29.09 E-value=97 Score=31.37 Aligned_cols=52 Identities=23% Similarity=0.242 Sum_probs=37.0
Q ss_pred HHHHHHHHcCCeeEEEEcCCCCchhH--HHHHHHHHhCCCcEEEEc-chHHHHHhh
Q psy17541 540 KILLTAHEKGTKFRVIIVDGSPWYEG--KEMLRRLVKHQVDCSYVL-LSAVSYIMR 592 (717)
Q Consensus 540 ~vL~~A~e~Gk~FrVIVvESRP~~EG--r~lA~~L~~~GI~vTyI~-DSAVsyiM~ 592 (717)
..|....++|++ -|+++.+-|..-| ..+++.|.+.||++.+|+ .+++.++..
T Consensus 84 ~~i~~~~~~g~~-Vv~L~~GDP~i~g~~~~l~~~l~~~gi~veviPGiSS~~aa~a 138 (285)
T 1cbf_A 84 GTMLDRMREGKM-VVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAA 138 (285)
T ss_dssp HHHHHHHTTTCC-EEEEESBCTTTTCCCHHHHHHHHHTTCEEEEECCCCHHHHHHH
T ss_pred HHHHHHHHCCCe-EEEEeCCCccccccHHHHHHHHHHCCCcEEEECCchHHHHHHH
Confidence 344444456776 4455569997765 688899999999999999 666666553
No 400
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=29.04 E-value=58 Score=31.93 Aligned_cols=26 Identities=12% Similarity=0.148 Sum_probs=20.6
Q ss_pred cccchHHHHHHHHhCCCcEEecccCC
Q psy17541 612 SRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 612 NKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
|-.||..+.-+|+.++++-+|.+.+.
T Consensus 95 n~~~~~~ll~a~~~~~v~~~v~~SS~ 120 (321)
T 3vps_A 95 NVDSGRHLLALCTSVGVPKVVVGSTC 120 (321)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEG
T ss_pred HHHHHHHHHHHHHHcCCCeEEEecCH
Confidence 67799999999999998777665543
No 401
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=29.00 E-value=1.3e+02 Score=30.86 Aligned_cols=55 Identities=15% Similarity=-0.035 Sum_probs=34.2
Q ss_pred cc-CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc
Q psy17541 523 LA-NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL 583 (717)
Q Consensus 523 I~-dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~ 583 (717)
+. .|++||++|.+.+=..++..|+..|- +||++++.+.. +.+++ .+.|.+..+-.
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~~~~~~--~~~~~--~~lGa~~vi~~ 232 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGH--HVTVISSSNKK--REEAL--QDLGADDYVIG 232 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSTTH--HHHHH--TTSCCSCEEET
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEeCChHH--HHHHH--HHcCCceeecc
Confidence 55 89999999976543445555655664 79988887642 22221 25677654433
No 402
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=28.93 E-value=1.5e+02 Score=24.45 Aligned_cols=77 Identities=12% Similarity=0.201 Sum_probs=46.2
Q ss_pred EEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHH--HHh-hhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCc
Q psy17541 553 RVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVS--YIM-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVP 629 (717)
Q Consensus 553 rVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVs--yiM-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VP 629 (717)
+|+|+|..|... ..+...|...|+.|....+..-+ .+- ...|.||+..+ +.++ -|--.+..+-+.+++|
T Consensus 4 ~ilivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlii~D~~--~p~~-----~g~~~~~~lr~~~~~~ 75 (120)
T 3f6p_A 4 KILVVDDEKPIA-DILEFNLRKEGYEVHCAHDGNEAVEMVEELQPDLILLDIM--LPNK-----DGVEVCREVRKKYDMP 75 (120)
T ss_dssp EEEEECSCHHHH-HHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCSEEEEETT--STTT-----HHHHHHHHHHTTCCSC
T ss_pred eEEEEECCHHHH-HHHHHHHHhCCEEEEEeCCHHHHHHHHhhCCCCEEEEeCC--CCCC-----CHHHHHHHHHhcCCCC
Confidence 677777766432 33556677788887766554322 221 24788887543 3322 3545555555567899
Q ss_pred EEecccCC
Q psy17541 630 VLAACETH 637 (717)
Q Consensus 630 VyV~cEty 637 (717)
|++++...
T Consensus 76 ii~~t~~~ 83 (120)
T 3f6p_A 76 IIMLTAKD 83 (120)
T ss_dssp EEEEEESS
T ss_pred EEEEECCC
Confidence 99987654
No 403
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=28.89 E-value=3.3e+02 Score=26.90 Aligned_cols=106 Identities=12% Similarity=0.260 Sum_probs=63.9
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeE--EEEcCCCCchh-------H---HHHHHHHHhCCCcEEEEcc-----------
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFR--VIIVDGSPWYE-------G---KEMLRRLVKHQVDCSYVLL----------- 584 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~Fr--VIVvESRP~~E-------G---r~lA~~L~~~GI~vTyI~D----------- 584 (717)
+|++||.+..+...+..+-.. ..|. +.+++.. ..+ | ..++..|.++|++...+.-
T Consensus 38 vVvV~Ggg~~~~~ll~~~g~~-~~~~~glr~t~~~-~l~~~~~~l~~~~n~~l~~~l~~~G~~a~~l~~~~~~~~~~~~~ 115 (258)
T 1gs5_A 38 LVIVHGGGCVVDELMKGLNLP-VKKKNGLRVTPAD-QIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQL 115 (258)
T ss_dssp EEEEECCHHHHHHHHHHHTCC-CCEETTEECBCHH-HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEECTTGGGCEEEEEC
T ss_pred EEEEeCCcHHHHHHHHHcCCC-cceeCCEeeCCHH-HHHHHHHHHhccchHHHHHHHHHCCCCeEEEeecCCCEEEEEEc
Confidence 799999999887777655211 1111 2222211 111 1 1255667788987766542
Q ss_pred ---------------hHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEeccc
Q psy17541 585 ---------------SAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 585 ---------------SAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cE 635 (717)
..+..++..-..+|+..-....+|.+.|--+=...+++|...+.-++.+..
T Consensus 116 ~~d~~~~g~~~~~~~~~i~~ll~~g~ipVi~~~g~~~~g~~~~~~~D~~Aa~lA~~l~Adli~ltd 181 (258)
T 1gs5_A 116 DEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSD 181 (258)
T ss_dssp CGGGBSBEEEEECCCHHHHHHHHTTCEEEECSEEECTTSCEEECCHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCCCCcCceeEECHHHHHHHHHCCCEEEEeCCcCCCCCcEEEecHHHHHHHHHHHhCCcEEEEeC
Confidence 234455555567777555667888887775666677889998877544443
No 404
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=28.81 E-value=1.7e+02 Score=26.82 Aligned_cols=98 Identities=11% Similarity=0.025 Sum_probs=57.5
Q ss_pred eEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--chHHHHHhhhccEEEEceeeE
Q psy17541 528 VILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--LSAVSYIMREVSKVIIGAHAL 604 (717)
Q Consensus 528 vILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--DSAVsyiM~~VdkVLLGAdaV 604 (717)
.||+.|-++-|-..|. .+.+.| ++|+++.-+|.. +..|. .++.+...- |... ..+..+|.||.-|-..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~~~-----~~~~~-~~~~~~~~D~~d~~~-~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRG--HEVTAIVRNAGK-----ITQTH-KDINILQKDIFDLTL-SDLSDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCSHH-----HHHHC-SSSEEEECCGGGCCH-HHHTTCSEEEECCCSS
T ss_pred eEEEEcCCchhHHHHHHHHHhCC--CEEEEEEcCchh-----hhhcc-CCCeEEeccccChhh-hhhcCCCEEEECCcCC
Confidence 5788887766655444 444556 577777655432 22232 555543322 2222 5667888888766432
Q ss_pred ecCCCeecccchHHHHHHHHhCCCcEEeccc
Q psy17541 605 LSNGAVMSRAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 605 laNG~VvNKiGT~~VALaAK~~~VPVyV~cE 635 (717)
....-+|-.|+..+.-+|+..+++-+|...
T Consensus 73 -~~~~~~~~~~~~~l~~a~~~~~~~~~v~~S 102 (221)
T 3ew7_A 73 -PDEAEKHVTSLDHLISVLNGTVSPRLLVVG 102 (221)
T ss_dssp -TTTTTSHHHHHHHHHHHHCSCCSSEEEEEC
T ss_pred -ccccchHHHHHHHHHHHHHhcCCceEEEEe
Confidence 222345778899999999988766555433
No 405
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=28.80 E-value=21 Score=30.64 Aligned_cols=57 Identities=12% Similarity=0.036 Sum_probs=38.3
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCC-CCchhHHHHHHHHHh-C--CCcEEEEcc
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDG-SPWYEGKEMLRRLVK-H--QVDCSYVLL 584 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvES-RP~~EGr~lA~~L~~-~--GI~vTyI~D 584 (717)
+|.+.....-....+......+..+.++++|- -|...|..+++.|.+ . .+++.+++.
T Consensus 29 ~v~~~~~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~lt~ 89 (133)
T 2r25_B 29 NIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTA 89 (133)
T ss_dssp CEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEES
T ss_pred eEEEECCHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEEEC
Confidence 46666555555555555444456789999884 588899999999986 3 456655543
No 406
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=28.79 E-value=1.4e+02 Score=24.66 Aligned_cols=78 Identities=12% Similarity=0.219 Sum_probs=46.3
Q ss_pred eEEEEcCCCCchhHHHHHHHHHhCCC--cEEEEcch--HHHHHhh--------hccEEEEceeeEecCCCeecccchHHH
Q psy17541 552 FRVIIVDGSPWYEGKEMLRRLVKHQV--DCSYVLLS--AVSYIMR--------EVSKVIIGAHALLSNGAVMSRAGTAQV 619 (717)
Q Consensus 552 FrVIVvESRP~~EGr~lA~~L~~~GI--~vTyI~DS--AVsyiM~--------~VdkVLLGAdaVlaNG~VvNKiGT~~V 619 (717)
.+|+|+|..|... ..+...|...|. .|....+. ++.++-. ..|.||+..+. .+ .-|-..+
T Consensus 3 ~~ilivdd~~~~~-~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~--~~-----~~g~~~~ 74 (140)
T 1k68_A 3 KKIFLVEDNKADI-RLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNL--PK-----KDGREVL 74 (140)
T ss_dssp CEEEEECCCHHHH-HHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSC--SS-----SCHHHHH
T ss_pred CeEEEEeCCHHHH-HHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCC--Cc-----ccHHHHH
Confidence 4677888766433 345667777887 56555543 3444442 57888887543 21 2244444
Q ss_pred HHHHHh---CCCcEEecccCC
Q psy17541 620 SLVARA---FNVPVLAACETH 637 (717)
Q Consensus 620 ALaAK~---~~VPVyV~cEty 637 (717)
..+-+. .++||++++...
T Consensus 75 ~~l~~~~~~~~~pii~ls~~~ 95 (140)
T 1k68_A 75 AEIKSDPTLKRIPVVVLSTSI 95 (140)
T ss_dssp HHHHHSTTGGGSCEEEEESCC
T ss_pred HHHHcCcccccccEEEEecCC
Confidence 444443 479999988764
No 407
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=28.77 E-value=1.3e+02 Score=31.06 Aligned_cols=22 Identities=18% Similarity=0.036 Sum_probs=15.9
Q ss_pred CCeEEEecCchHHHHHHHHHHH
Q psy17541 526 DDVILTYGCSSLVEKILLTAHE 547 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e 547 (717)
..+++|-|-+..+..+|..+..
T Consensus 90 ~~v~~~~gg~ea~~~al~~~~~ 111 (430)
T 3i4j_A 90 FRFWAVSGGSEATESAVKLARQ 111 (430)
T ss_dssp CEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEEeCcHHHHHHHHHHHHHH
Confidence 3678888888888777776643
No 408
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=28.70 E-value=55 Score=27.59 Aligned_cols=35 Identities=14% Similarity=0.205 Sum_probs=26.1
Q ss_pred CCeeEEEEcCCC-CchhHHHHHHHHHhCC---CcEEEEc
Q psy17541 549 GTKFRVIIVDGS-PWYEGKEMLRRLVKHQ---VDCSYVL 583 (717)
Q Consensus 549 Gk~FrVIVvESR-P~~EGr~lA~~L~~~G---I~vTyI~ 583 (717)
...+.++++|-. |...|..+++.|.+.+ +++.+++
T Consensus 50 ~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s 88 (136)
T 3hdv_A 50 QKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVS 88 (136)
T ss_dssp CTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEE
T ss_pred CCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEe
Confidence 345899999865 8888999999998762 5555554
No 409
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=28.64 E-value=43 Score=30.65 Aligned_cols=79 Identities=10% Similarity=0.130 Sum_probs=47.2
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHh-CCC
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA-FNV 628 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~-~~V 628 (717)
...+|+|+|..|... ..+...|...|+.+....++.-+. -...|.||+..+ +.+. + |. .+..+... ..+
T Consensus 11 ~~~~iLivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~al-~~~~dlvl~D~~--mp~~---~--g~-l~~~~~~~~~~~ 80 (196)
T 1qo0_D 11 RELQVLVLNPPGEVS-DALVLQLIRIGCSVRQCWPPPEAF-DVPVDVVFTSIF--QNRH---H--DE-IAALLAAGTPRT 80 (196)
T ss_dssp GGCEEEEESCTTHHH-HHHHHHHHHHTCEEEEECSCCSSC-SSCCSEEEEECC--SSTH---H--HH-HHHHHHHSCTTC
T ss_pred cCCeEEEEcCChhHH-HHHHHHHHHcCCeEEEecCchhhC-CCCCCEEEEeCC--CCcc---c--hH-HHHHHhccCCCC
Confidence 446788888777543 234556667788887766544211 235788887643 2221 1 44 34444444 689
Q ss_pred cEEecccCCc
Q psy17541 629 PVLAACETHK 638 (717)
Q Consensus 629 PVyV~cEtyK 638 (717)
||++++....
T Consensus 81 ~ii~lt~~~~ 90 (196)
T 1qo0_D 81 TLVALVEYES 90 (196)
T ss_dssp EEEEEECCCS
T ss_pred CEEEEEcCCC
Confidence 9999877543
No 410
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=28.57 E-value=2e+02 Score=29.02 Aligned_cols=69 Identities=13% Similarity=0.049 Sum_probs=48.0
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEcee
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAH 602 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAd 602 (717)
.|.+|+.+|.+..=..+...+...|. +|++.+-+|.. +..+.+.|+.+ +....+..++.++|.|++-.-
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~--~V~~~d~~~~~-----~~~~~~~g~~~--~~~~~l~~~l~~aDvVi~~~p 224 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGA--NVKVGARSSAH-----LARITEMGLVP--FHTDELKEHVKDIDICINTIP 224 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSHHH-----HHHHHHTTCEE--EEGGGHHHHSTTCSEEEECCS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCC--EEEEEECCHHH-----HHHHHHCCCeE--EchhhHHHHhhCCCEEEECCC
Confidence 57899999999887777777776664 78888866531 23344567653 323456677889999988754
No 411
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=28.54 E-value=67 Score=32.33 Aligned_cols=52 Identities=15% Similarity=0.224 Sum_probs=33.5
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
.+..|++||++|.+.+=..++.-|+..|- +||+++ ++.. +.++++ .|.+..+
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~-~~~~--~~~~~~---lGa~~v~ 190 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNAGY--VVDLVS-ASLS--QALAAK---RGVRHLY 190 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHHTC--EEEEEC-SSCC--HHHHHH---HTEEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEE-Chhh--HHHHHH---cCCCEEE
Confidence 36789999999995543445555655665 899888 5542 345544 4665443
No 412
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=28.48 E-value=2e+02 Score=30.17 Aligned_cols=104 Identities=18% Similarity=0.293 Sum_probs=62.6
Q ss_pred HhhccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCC--------------chhH----HHHHHHHHhC--CCcE
Q psy17541 520 HNKLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSP--------------WYEG----KEMLRRLVKH--QVDC 579 (717)
Q Consensus 520 ~e~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP--------------~~EG----r~lA~~L~~~--GI~v 579 (717)
.+.+. +..||..|.+.+=..++......|.. ++.++|... ..-| ..++++|.+. .+.+
T Consensus 113 q~~L~-~~~VlvvG~GglGs~va~~La~aGvg-~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v 190 (353)
T 3h5n_A 113 QDKLK-NAKVVILGCGGIGNHVSVILATSGIG-EIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISV 190 (353)
T ss_dssp HHHHH-TCEEEEECCSHHHHHHHHHHHHHTCS-EEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred HHHHh-CCeEEEECCCHHHHHHHHHHHhCCCC-eEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeE
Confidence 44453 46899999887655566655556753 444444321 1112 2566667764 4566
Q ss_pred EEEcc-----hHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecc
Q psy17541 580 SYVLL-----SAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAAC 634 (717)
Q Consensus 580 TyI~D-----SAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~c 634 (717)
+.+.. +.+.. +..+|.||.+.|.... --+.+.-+|+.+++|++-++
T Consensus 191 ~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn~~~--------~r~~ln~~c~~~~~p~i~~~ 241 (353)
T 3h5n_A 191 SEIALNINDYTDLHK-VPEADIWVVSADHPFN--------LINWVNKYCVRANQPYINAG 241 (353)
T ss_dssp EEEECCCCSGGGGGG-SCCCSEEEECCCCSTT--------HHHHHHHHHHHTTCCEEEEE
T ss_pred EEeecccCchhhhhH-hccCCEEEEecCChHH--------HHHHHHHHHHHhCCCEEEEE
Confidence 55442 22444 7788999887764320 33567778999999999653
No 413
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=28.48 E-value=68 Score=30.39 Aligned_cols=76 Identities=9% Similarity=0.152 Sum_probs=43.6
Q ss_pred eEEEEcCCCCchhH-HHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCeecc-------cchHHHHHHH
Q psy17541 552 FRVIIVDGSPWYEG-KEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSR-------AGTAQVSLVA 623 (717)
Q Consensus 552 FrVIVvESRP~~EG-r~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNK-------iGT~~VALaA 623 (717)
.+|.|+|.. .++ ..+++.|.+.|+.+.++.+.. -+.++|.+||+- |+-... .+...+..-+
T Consensus 3 ~~I~iid~~--~~~~~~~~~~l~~~G~~~~~~~~~~---~l~~~d~lil~G------~g~~~~~~~~l~~~~~~~~i~~~ 71 (200)
T 1ka9_H 3 MKALLIDYG--SGNLRSAAKALEAAGFSVAVAQDPK---AHEEADLLVLPG------QGHFGQVMRAFQESGFVERVRRH 71 (200)
T ss_dssp CEEEEECSS--CSCHHHHHHHHHHTTCEEEEESSTT---SCSSCSEEEECC------CSCHHHHHHTTSSSCTHHHHHHH
T ss_pred cEEEEEeCC--CccHHHHHHHHHHCCCeEEEecChH---HcccCCEEEECC------CCcHHHHHHHHHhcCHHHHHHHH
Confidence 356666641 112 456888999999999887542 244567666543 121111 2233333334
Q ss_pred HhCCCcEEecccCCc
Q psy17541 624 RAFNVPVLAACETHK 638 (717)
Q Consensus 624 K~~~VPVyV~cEtyK 638 (717)
...++||+-+|--+-
T Consensus 72 ~~~~~PilGIC~G~Q 86 (200)
T 1ka9_H 72 LERGLPFLGICVGMQ 86 (200)
T ss_dssp HHTTCCEEECTHHHH
T ss_pred HHcCCeEEEEcHHHH
Confidence 467999998875443
No 414
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=28.38 E-value=1.1e+02 Score=30.34 Aligned_cols=103 Identities=14% Similarity=0.138 Sum_probs=58.3
Q ss_pred CeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc--c-hHHHHHhhhccEEEEcee
Q psy17541 527 DVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL--L-SAVSYIMREVSKVIIGAH 602 (717)
Q Consensus 527 dvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~--D-SAVsyiM~~VdkVLLGAd 602 (717)
.+||+.|-+..|-..|. .+.+.| .+|++++-++... ..|...++.+...- | .++..++..+|.||--|-
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~-----~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG--HDLVLIHRPSSQI-----QRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECTTSCG-----GGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CEEEEEecChHhh-----hhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 47888888776655554 444555 5677665444321 12333465543322 1 356677888888887664
Q ss_pred eEecC-CC-----eecccchHHHHHHHHhCCCcEEecccC
Q psy17541 603 ALLSN-GA-----VMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 603 aVlaN-G~-----VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
..... .. -+|-.||..+.-+|+.+++.-+|...+
T Consensus 87 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS 126 (342)
T 2x4g_A 87 YYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGS 126 (342)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHTCSCEEEECC
T ss_pred cCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 32110 01 146779999999999888765554443
No 415
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=28.35 E-value=2e+02 Score=24.16 Aligned_cols=81 Identities=14% Similarity=0.246 Sum_probs=48.3
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHH--HHh-hhccEEEEceeeEecCCCeecccchHHHHHHHH--
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVS--YIM-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR-- 624 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVs--yiM-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK-- 624 (717)
...+|+|+|..+... ..+...|...|+.|....+..-+ .+- ...|.||+..+- .+ .-|--.+..+-+
T Consensus 5 ~~~~iLivdd~~~~~-~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l--~~-----~~g~~~~~~l~~~~ 76 (140)
T 3grc_A 5 PRPRILICEDDPDIA-RLLNLMLEKGGFDSDMVHSAAQALEQVARRPYAAMTVDLNL--PD-----QDGVSLIRALRRDS 76 (140)
T ss_dssp CCSEEEEECSCHHHH-HHHHHHHHHTTCEEEEECSHHHHHHHHHHSCCSEEEECSCC--SS-----SCHHHHHHHHHTSG
T ss_pred CCCCEEEEcCCHHHH-HHHHHHHHHCCCeEEEECCHHHHHHHHHhCCCCEEEEeCCC--CC-----CCHHHHHHHHHhCc
Confidence 346788888776542 34566677788887776654322 222 257888886542 22 223333444433
Q ss_pred -hCCCcEEecccCCc
Q psy17541 625 -AFNVPVLAACETHK 638 (717)
Q Consensus 625 -~~~VPVyV~cEtyK 638 (717)
..++||++++....
T Consensus 77 ~~~~~~ii~~s~~~~ 91 (140)
T 3grc_A 77 RTRDLAIVVVSANAR 91 (140)
T ss_dssp GGTTCEEEEECTTHH
T ss_pred ccCCCCEEEEecCCC
Confidence 35899999987643
No 416
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=28.30 E-value=1.5e+02 Score=28.59 Aligned_cols=64 Identities=22% Similarity=0.168 Sum_probs=38.1
Q ss_pred HHhCCCcEEEEcc--h---HHHHHhhhccEEEEceeeEecCCCee-cccchHHHHHHHHhCCCcEEecccCCc
Q psy17541 572 LVKHQVDCSYVLL--S---AVSYIMREVSKVIIGAHALLSNGAVM-SRAGTAQVSLVARAFNVPVLAACETHK 638 (717)
Q Consensus 572 L~~~GI~vTyI~D--S---AVsyiM~~VdkVLLGAdaVlaNG~Vv-NKiGT~~VALaAK~~~VPVyV~cEtyK 638 (717)
+...|+++..... . .+..+-.++|.|++|.+.- ++++- --.|+..-.++ ++.++||+|+-+.+.
T Consensus 83 ~~~~g~~~~~~~~~g~~~~~I~~~~~~~dliV~G~~g~--~~~~~~~~~Gs~~~~v~-~~a~~PVlvv~~~~~ 152 (268)
T 3ab8_A 83 ALAAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGE--AHGDGFGGLGSTADRVL-RASPVPVLLAPGEPV 152 (268)
T ss_dssp HHHTTCCEEEEEEEECHHHHHHHHHTTCSEEEEESSCT--TSCTTCCSCCHHHHHHH-HHCSSCEEEECSSCC
T ss_pred HHhCCCCeEEEEecCCHHHHHHhhccCCCEEEEeccCC--CccccccccchhHHHHH-HhCCCCEEEECCCCC
Confidence 4456777665431 1 2222234799999999863 10221 23677655555 567899999876553
No 417
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=28.26 E-value=1.6e+02 Score=24.26 Aligned_cols=80 Identities=16% Similarity=0.134 Sum_probs=47.3
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHH--HHHh-hhccEEEEceeeEecCCCeecccchHHHHHHHH---
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAV--SYIM-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR--- 624 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAV--syiM-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK--- 624 (717)
..+|+|+|..|.. ...+...|...|+.|....+..- ..+- ...|.||+..+- .+ .-|--.+..+-+
T Consensus 3 ~~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~D~~l--~~-----~~g~~~~~~l~~~~~ 74 (127)
T 3i42_A 3 LQQALIVEDYQAA-AETFKELLEMLGFQADYVMSGTDALHAMSTRGYDAVFIDLNL--PD-----TSGLALVKQLRALPM 74 (127)
T ss_dssp CEEEEEECSCHHH-HHHHHHHHHHTTEEEEEESSHHHHHHHHHHSCCSEEEEESBC--SS-----SBHHHHHHHHHHSCC
T ss_pred cceEEEEcCCHHH-HHHHHHHHHHcCCCEEEECCHHHHHHHHHhcCCCEEEEeCCC--CC-----CCHHHHHHHHHhhhc
Confidence 3578888877654 33456667778888777665432 2222 247888887643 22 224344444444
Q ss_pred hCCCcEEecccCCc
Q psy17541 625 AFNVPVLAACETHK 638 (717)
Q Consensus 625 ~~~VPVyV~cEtyK 638 (717)
..++||++++....
T Consensus 75 ~~~~~ii~~s~~~~ 88 (127)
T 3i42_A 75 EKTSKFVAVSGFAK 88 (127)
T ss_dssp SSCCEEEEEECC-C
T ss_pred cCCCCEEEEECCcc
Confidence 35799999886543
No 418
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=28.21 E-value=2.5e+02 Score=28.14 Aligned_cols=97 Identities=14% Similarity=0.138 Sum_probs=53.0
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--------HHHHHhh--hcc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS--------AVSYIMR--EVS 595 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS--------AVsyiM~--~Vd 595 (717)
..+++|.|.+..+..++..+...| -+|++.+ |.+.|... .+...|..+..+... .+-..+. ++.
T Consensus 93 ~~v~~~~G~~~al~~~~~~l~~~g--d~Vl~~~--~~y~~~~~--~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~ 166 (369)
T 3cq5_A 93 DNLWAANGSNEILQQLLQAFGGPG--RTALGFQ--PSYSMHPI--LAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPD 166 (369)
T ss_dssp GGEEEESHHHHHHHHHHHHHCSTT--CEEEEEE--SSCTHHHH--HHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCS
T ss_pred HhEEECCChHHHHHHHHHHhcCCC--CEEEEcC--CChHHHHH--HHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCC
Confidence 457778777777666665553334 2455544 66666433 344578888777521 2323333 455
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.|++ ...-...|.++.. ..+.-+++.+++.|++
T Consensus 167 ~v~~-~~~~nptG~~~~~---~~l~~l~~~~~~~li~ 199 (369)
T 3cq5_A 167 IVFV-TTPNNPTGDVTSL---DDVERIINVAPGIVIV 199 (369)
T ss_dssp EEEE-ESSCTTTCCCCCH---HHHHHHHHHCSSEEEE
T ss_pred EEEE-eCCCCCCCCCCCH---HHHHHHHHhCCCEEEE
Confidence 6665 2222234555542 4566677777755444
No 419
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=28.20 E-value=1.1e+02 Score=31.81 Aligned_cols=55 Identities=9% Similarity=0.065 Sum_probs=35.6
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
.+..|++||++|.+.+=..++.-|+..|-. +|+++++.+.. +.+++. .|.+..+.
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~-~Vi~~~~~~~~--~~~a~~---lGa~~vi~ 233 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGAT-TVILSTRQATK--RRLAEE---VGATATVD 233 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCS-EEEEECSCHHH--HHHHHH---HTCSEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEECCCHHH--HHHHHH---cCCCEEEC
Confidence 478899999999865444455556555532 78888887543 344444 47765543
No 420
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=28.19 E-value=2e+02 Score=26.91 Aligned_cols=63 Identities=6% Similarity=0.146 Sum_probs=41.7
Q ss_pred HHHHHHHhCCCcEEEEcchHHHH----HhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 567 EMLRRLVKHQVDCSYVLLSAVSY----IMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 567 ~lA~~L~~~GI~vTyI~DSAVsy----iM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
.++..|...|++|.++.+....+ .+.+=|.||+ |...|.- .-+..++-.|+..|+++++++..
T Consensus 62 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~----iS~sG~t---~~~~~~~~~ak~~g~~vi~IT~~ 128 (201)
T 3fxa_A 62 KLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILIL----ISKGGNT---GELLNLIPACKTKGSTLIGVTEN 128 (201)
T ss_dssp HHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEE----ECSSSCC---HHHHTTHHHHHHHTCEEEEEESC
T ss_pred HHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEE----EeCCCCC---HHHHHHHHHHHHcCCeEEEEECC
Confidence 35566777899999887754322 1334466554 3345543 34567788899999999998764
No 421
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=28.12 E-value=1.3e+02 Score=25.54 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=46.2
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCc--EEEEcchH--HHHHh-hhccEEEEceeeEecCCCeecccchHHHHHHHH
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVD--CSYVLLSA--VSYIM-REVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR 624 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~--vTyI~DSA--VsyiM-~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK 624 (717)
...+|+|+|..+... ..+...|...|.. +....+.. +..+- ...|.||+..+- .+ .-|--.+..+-+
T Consensus 4 ~~~~ILivdd~~~~~-~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l--~~-----~~g~~~~~~lr~ 75 (144)
T 3kht_A 4 RSKRVLVVEDNPDDI-ALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGL--PI-----ANGFEVMSAVRK 75 (144)
T ss_dssp -CEEEEEECCCHHHH-HHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTC--GG-----GCHHHHHHHHHS
T ss_pred CCCEEEEEeCCHHHH-HHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCC--CC-----CCHHHHHHHHHh
Confidence 346888888876542 3456677788887 44443332 22222 247888887542 22 224344444433
Q ss_pred ---hCCCcEEecccCCc
Q psy17541 625 ---AFNVPVLAACETHK 638 (717)
Q Consensus 625 ---~~~VPVyV~cEtyK 638 (717)
..++||++++....
T Consensus 76 ~~~~~~~pii~~s~~~~ 92 (144)
T 3kht_A 76 PGANQHTPIVILTDNVS 92 (144)
T ss_dssp SSTTTTCCEEEEETTCC
T ss_pred cccccCCCEEEEeCCCC
Confidence 35799999987543
No 422
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=28.08 E-value=1.7e+02 Score=28.72 Aligned_cols=95 Identities=9% Similarity=0.140 Sum_probs=50.2
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--------HHHHhhhccEEE
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--------VSYIMREVSKVI 598 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--------VsyiM~~VdkVL 598 (717)
.+++|.|-+..+..++. +.. .. +|+++..-.+ +..+...+...|+.+.++.... +- +-++...|+
T Consensus 63 ~v~~~~g~t~al~~~~~-~l~--~~-~~i~~~~~~~--~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~-~~~~~~~v~ 135 (362)
T 3ffr_A 63 EVLFLASATEIWERIIQ-NCV--EK-KSFHCVNGSF--SKRFYEFAGELGREAYKEEAAFGKGFYPADIT-VPADAEIIC 135 (362)
T ss_dssp EEEEESCHHHHHHHHHH-HHC--SS-EEEEEECSHH--HHHHHHHHHHTTCEEEEEECCTTCCCCGGGCC-CCTTCCEEE
T ss_pred EEEEeCCchHHHHHHHH-hcc--CC-cEEEEcCcHH--HHHHHHHHHHhCCCeEEEecCCCCCCCHHHHh-ccCCccEEE
Confidence 35666555454444444 432 22 7666655333 2333445566799988886321 11 112344444
Q ss_pred EceeeEecCCCeecccchHHHHHHHHhC-CCcEEe
Q psy17541 599 IGAHALLSNGAVMSRAGTAQVSLVARAF-NVPVLA 632 (717)
Q Consensus 599 LGAdaVlaNG~VvNKiGT~~VALaAK~~-~VPVyV 632 (717)
+- +-=-..|.++. --.|+-+|+.| |++|+|
T Consensus 136 ~~-~~~nptG~~~~---l~~i~~la~~~p~~~li~ 166 (362)
T 3ffr_A 136 LT-HNETSSGVSMP---VEDINTFRDKNKDALIFV 166 (362)
T ss_dssp EE-SEETTTTEECC---HHHHTTSGGGSTTSEEEE
T ss_pred EE-cCCCCcceeCC---HHHHHHHHHhCCCCEEEE
Confidence 43 22223455544 23467789999 998887
No 423
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=28.06 E-value=79 Score=30.84 Aligned_cols=99 Identities=13% Similarity=0.069 Sum_probs=58.4
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhhhccEEEEc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMREVSKVIIG 600 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~~VdkVLLG 600 (717)
+.+||+.|-++-|-..|...... ...+|++++-++.... +-.+.++. | .++..++.++|.||--
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~-~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 71 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAP-MAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVAGCDGIVHL 71 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGG-GEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHh-cCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEEC
Confidence 35788888777766655544322 2357777765543221 22333332 2 4466677777777655
Q ss_pred eeeEecCCC-----eecccchHHHHHHHHhCCCcEEecccC
Q psy17541 601 AHALLSNGA-----VMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 601 AdaVlaNG~-----VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
|-. ..... -+|-.||+.+.-+|+.++++-+|...+
T Consensus 72 Ag~-~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS 111 (267)
T 3rft_A 72 GGI-SVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASS 111 (267)
T ss_dssp CSC-CSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCC-cCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 432 11111 257899999999999999865555433
No 424
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=28.01 E-value=2.5e+02 Score=28.62 Aligned_cols=68 Identities=7% Similarity=0.186 Sum_probs=39.3
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVI 598 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVL 598 (717)
.|.+||..|.+.+-..+.....+.|-. +|+|+. |-......++..+...| ++..+....+. .++|.||
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~-~v~v~~-R~~~~a~~la~~~~~~~-~~~~~~~~~l~---~~aDiII 192 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPA-SITVTN-RTFAKAEQLAELVAAYG-EVKAQAFEQLK---QSYDVII 192 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCS-EEEEEE-SSHHHHHHHHHHHGGGS-CEEEEEGGGCC---SCEEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCC-eEEEEE-CCHHHHHHHHHHhhccC-CeeEeeHHHhc---CCCCEEE
Confidence 577899999887766666666655521 455553 33334567777776654 44444322221 4556555
No 425
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=27.99 E-value=83 Score=31.32 Aligned_cols=69 Identities=22% Similarity=0.133 Sum_probs=40.8
Q ss_pred EEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc----------chHHHHHhh--hccE
Q psy17541 529 ILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL----------LSAVSYIMR--EVSK 596 (717)
Q Consensus 529 ILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~----------DSAVsyiM~--~Vdk 596 (717)
||.-|.++....+|. +...+..++|..+=|.|...+.. .-.++|||+.++. |..+...+. ++|.
T Consensus 17 vl~SG~gsnl~all~-~~~~~~~~eI~~Vis~~~a~~~~---~A~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~~~Dl 92 (215)
T 3da8_A 17 VLASGTGSLLRSLLD-AAVGDYPARVVAVGVDRECRAAE---IAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDL 92 (215)
T ss_dssp EEESSCCHHHHHHHH-HSSTTCSEEEEEEEESSCCHHHH---HHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHTTCCSE
T ss_pred EEEeCChHHHHHHHH-HHhccCCCeEEEEEeCCchHHHH---HHHHcCCCEEEeCcccccchhhhhHHHHHHHHhhCCCE
Confidence 444477787665554 43333445666555555444433 3446799999885 234555554 5888
Q ss_pred EEEce
Q psy17541 597 VIIGA 601 (717)
Q Consensus 597 VLLGA 601 (717)
+++-+
T Consensus 93 ivlag 97 (215)
T 3da8_A 93 VVSAG 97 (215)
T ss_dssp EEEEE
T ss_pred EEEcC
Confidence 88755
No 426
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=27.95 E-value=4e+02 Score=29.60 Aligned_cols=118 Identities=12% Similarity=0.039 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHhhcc--CCCeEEEecCc-hH---HHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 509 DMAGNAICMFFHNKLA--NDDVILTYGCS-SL---VEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 509 ~~A~e~Ia~~A~e~I~--dGdvILTyg~S-St---V~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
+.|...+++...+.+. .+..|++++-+ .- -.-+-++++..|.+.+||++...-..+.+.....|.+.|+++.
T Consensus 33 E~Ag~a~a~~i~~~~~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~-- 110 (502)
T 3rss_A 33 ERAGISVVLAMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV-- 110 (502)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE--
T ss_pred HHHHHHHHHHHHHhcCccCCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee--
Confidence 3356666666666664 35667666432 21 1122244555688788887754312223455677888999875
Q ss_pred cchHHHHHhhhccEEEEceeeEecCCCeecccchHHHHH-HHHhCCCcEEe
Q psy17541 583 LLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSL-VARAFNVPVLA 632 (717)
Q Consensus 583 ~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VAL-aAK~~~VPVyV 632 (717)
+..+...+...|.|| |+||--|---.--|-+.-.+ .....+.||+-
T Consensus 111 -~~~~~~~~~~~dliV---DalfG~Gl~~~l~~~~~~~i~~iN~~~~~vvA 157 (502)
T 3rss_A 111 -EQFEPSILNEFDVVV---DAIFGTGLRGEITGEYAEIINLVNKSGKVVVS 157 (502)
T ss_dssp -SCCCGGGGGGCSEEE---EESCSTTCCSCCCHHHHHHHHHHHTTCCEEEE
T ss_pred -cccccccCCCCCEEE---EeCccCCCCCCCcHHHHHHHHHHHcCCCCEEE
Confidence 111112345677764 77877653222223332222 23445677664
No 427
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=27.74 E-value=1.2e+02 Score=30.12 Aligned_cols=69 Identities=16% Similarity=0.272 Sum_probs=39.6
Q ss_pred eEEEecCchHHHHHHHHHHHcCC---eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc----------hHHHHHhh--
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGT---KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL----------SAVSYIMR-- 592 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk---~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D----------SAVsyiM~-- 592 (717)
.||.-|.++..+.+ ..+.+.|. .+.++|+ .+|...+...| .++|||+.++.. ..+...+.
T Consensus 6 avl~Sg~Gsnl~al-i~~~~~~~l~~eI~~Vis-n~~~a~v~~~A---~~~gIp~~~~~~~~~~~r~~~d~~~~~~l~~~ 80 (211)
T 3p9x_A 6 AIFASGSGTNAEAI-IQSQKAGQLPCEVALLIT-DKPGAKVVERV---KVHEIPVCALDPKTYPSKEAYEIEVVQQLKEK 80 (211)
T ss_dssp EEECCTTCHHHHHH-HHHHHTTCCSSEEEEEEE-SCSSSHHHHHH---HTTTCCEEECCGGGSSSHHHHHHHHHHHHHHT
T ss_pred EEEEeCCchHHHHH-HHHHHcCCCCcEEEEEEE-CCCCcHHHHHH---HHcCCCEEEeChhhcCchhhhHHHHHHHHHhc
Confidence 46666777775554 44555553 2333343 46665544433 457999987753 23444454
Q ss_pred hccEEEEce
Q psy17541 593 EVSKVIIGA 601 (717)
Q Consensus 593 ~VdkVLLGA 601 (717)
++|.+++-+
T Consensus 81 ~~Dliv~ag 89 (211)
T 3p9x_A 81 QIDFVVLAG 89 (211)
T ss_dssp TCCEEEESS
T ss_pred CCCEEEEeC
Confidence 578877654
No 428
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=27.73 E-value=1.7e+02 Score=30.15 Aligned_cols=54 Identities=17% Similarity=0.151 Sum_probs=34.2
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
.+..|++||++|.+.+=..++..|+..|-. +|++++..+.. +.++++ .|.+..+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~-~Vi~~~~~~~~--~~~~~~---lGa~~vi 240 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGAS-RIIGVDINKDK--FARAKE---FGATECI 240 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCS-EEEEECSCGGG--HHHHHH---HTCSEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCCHHH--HHHHHH---cCCceEe
Confidence 467899999999755434445556555632 78888876643 344444 4776544
No 429
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=27.64 E-value=58 Score=27.62 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=34.8
Q ss_pred CeeEEEEcCCC-CchhHHHHHHHHHh----CCCcEEEEcchHHHHHhhhccEEEEceeeEec
Q psy17541 550 TKFRVIIVDGS-PWYEGKEMLRRLVK----HQVDCSYVLLSAVSYIMREVSKVIIGAHALLS 606 (717)
Q Consensus 550 k~FrVIVvESR-P~~EGr~lA~~L~~----~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVla 606 (717)
..+.++++|-. |...|..+++.|.+ .++++.+++...-...+. ....-.||+.++.
T Consensus 49 ~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~-~~~~~~g~~~~l~ 109 (140)
T 3grc_A 49 RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANAREGELE-FNSQPLAVSTWLE 109 (140)
T ss_dssp SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTHHHHHHH-HCCTTTCCCEEEC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCCChHHHH-HHhhhcCCCEEEe
Confidence 45888888865 88889999999987 356777666544322211 1223346555544
No 430
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=27.49 E-value=2.3e+02 Score=29.91 Aligned_cols=103 Identities=19% Similarity=0.165 Sum_probs=54.9
Q ss_pred CeEEEecCchHHHHHHHHHHH-cCCeeEEEEcCCCCchhHHHH-HHHHHhC------C-----CcEEEEcch--------
Q psy17541 527 DVILTYGCSSLVEKILLTAHE-KGTKFRVIIVDGSPWYEGKEM-LRRLVKH------Q-----VDCSYVLLS-------- 585 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e-~Gk~FrVIVvESRP~~EGr~l-A~~L~~~------G-----I~vTyI~DS-------- 585 (717)
.+++|-|-|..++.+|+.|.. .|+ -.|++.+ |.+.|..+ +..+... + -.+..++..
T Consensus 127 ~v~~~~sGseA~~~alk~a~~~~g~-~~ii~~~--~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 203 (453)
T 4ffc_A 127 RTALFNSGAEAVENAIKVARLATGR-PAVVAFD--NAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPG 203 (453)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHCC-CEEEEET--TCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTT
T ss_pred EEEEeCcHHHHHHHHHHHHHHhcCC-CEEEEEc--CccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccc
Confidence 578888888888888887754 343 3455543 45555422 2223211 1 134444322
Q ss_pred -----H-------HHHHhhhccEEEEceeeEecCCCeec-ccchH-HHHHHHHhCCCcEEe
Q psy17541 586 -----A-------VSYIMREVSKVIIGAHALLSNGAVMS-RAGTA-QVSLVARAFNVPVLA 632 (717)
Q Consensus 586 -----A-------VsyiM~~VdkVLLGAdaVlaNG~VvN-KiGT~-~VALaAK~~~VPVyV 632 (717)
. +-..+..-+..++=.+-+..+|+++- .-+-+ .|+-+|++|++.+++
T Consensus 204 ~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~ 264 (453)
T 4ffc_A 204 LTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIA 264 (453)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEE
T ss_pred cchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 1 11222211233333456777776654 33333 377789999998875
No 431
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=27.48 E-value=39 Score=28.31 Aligned_cols=54 Identities=13% Similarity=0.118 Sum_probs=30.8
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCC-CchhHHHHHHHHHhCC--CcEEEEcc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGS-PWYEGKEMLRRLVKHQ--VDCSYVLL 584 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESR-P~~EGr~lA~~L~~~G--I~vTyI~D 584 (717)
|..|.+...+. .++... ....+.++++|-. |...|..+++.|.+.+ +++.+++.
T Consensus 31 g~~v~~~~~~~---~a~~~l--~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~ 87 (130)
T 3eod_A 31 GATTVLAADGV---DALELL--GGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISA 87 (130)
T ss_dssp TCEEEEESCHH---HHHHHH--TTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEEC
T ss_pred CceEEEeCCHH---HHHHHH--hcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEc
Confidence 44555543332 333333 2456888988865 7778899999998864 56655554
No 432
>1tcv_A Purine-nucleoside phosphorylase; transferase; HET: NDS; 1.75A {Schistosoma mansoni} PDB: 1tcu_A* 1td1_A 3djf_A* 3e0q_A* 3e9r_A* 3e9z_A* 3f8w_A* 3faz_A* 3fb1_A* 3fnq_A* 3iex_A*
Probab=27.47 E-value=92 Score=32.20 Aligned_cols=73 Identities=21% Similarity=0.310 Sum_probs=46.3
Q ss_pred ecCchHHHHHHHHHHH---cCCeeE--EEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEec
Q psy17541 532 YGCSSLVEKILLTAHE---KGTKFR--VIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLS 606 (717)
Q Consensus 532 yg~SStV~~vL~~A~e---~Gk~Fr--VIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVla 606 (717)
.-|+..+...+..+.+ .|.+++ ||+.-+.|.++-..-.+.|.. +|||+|=-
T Consensus 166 ~~~d~~L~~~~~~~a~~~~~~~~~~~Gvy~~~~Gp~feT~aE~~~~r~------------------------~Gad~VgM 221 (287)
T 1tcv_A 166 NAYDRDLRKLAVQVAEENGFGNLVHQGVYVMNGGPCYETPAECTMLLN------------------------MGCDVVGM 221 (287)
T ss_dssp TSBCHHHHHHHHHHHHHTTCGGGEEEEEEEECCCSSCCCHHHHHHHHH------------------------TTCSEEES
T ss_pred cccCHHHHHHHHHHHhhhcCCCceeeEEEEEecCCccCCHHHHHHHHH------------------------cCCcEEcc
Confidence 3466666666665543 243343 677777888876532333322 26666654
Q ss_pred CCCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 607 NGAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 607 NG~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
. |.+.|.+|+++++||.+++--
T Consensus 222 e--------~~~ea~vA~~~gi~~~~i~~V 243 (287)
T 1tcv_A 222 S--------TIPEVVIARHCGIQVFAVSLV 243 (287)
T ss_dssp S--------SHHHHHHHHHTTCEEEEEEEE
T ss_pred c--------HHHHHHHHHHCCCCEEEEEEe
Confidence 4 488999999999999987643
No 433
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=27.45 E-value=1.4e+02 Score=32.89 Aligned_cols=67 Identities=10% Similarity=0.097 Sum_probs=46.8
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEc
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIG 600 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLG 600 (717)
..-.|.+|.+.|++..=..+...+...| .+|+++|..|.. +......|+.+. .+.-++.++|.|++-
T Consensus 207 ~~L~GktVgIiG~G~IG~~vA~~Lka~G--a~Viv~D~~p~~-----a~~A~~~G~~~~-----sL~eal~~ADVVilt 273 (436)
T 3h9u_A 207 VMIAGKTACVCGYGDVGKGCAAALRGFG--ARVVVTEVDPIN-----ALQAAMEGYQVL-----LVEDVVEEAHIFVTT 273 (436)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHH-----HHHHHHTTCEEC-----CHHHHTTTCSEEEEC
T ss_pred CcccCCEEEEEeeCHHHHHHHHHHHHCC--CEEEEECCChhh-----hHHHHHhCCeec-----CHHHHHhhCCEEEEC
Confidence 3346899999999988666666666556 479999987642 122335676543 567788899999863
No 434
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=27.43 E-value=76 Score=29.84 Aligned_cols=67 Identities=12% Similarity=0.079 Sum_probs=45.3
Q ss_pred cCchHHHHHHHHHHH-cCC--eeEEEEcCCCCchhH----HHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEE
Q psy17541 533 GCSSLVEKILLTAHE-KGT--KFRVIIVDGSPWYEG----KEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVII 599 (717)
Q Consensus 533 g~SStV~~vL~~A~e-~Gk--~FrVIVvESRP~~EG----r~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLL 599 (717)
++|...+.+|++... .|. .|.|.=.-+.|+..| ...++.|.++||++...+-.--...+...|.||.
T Consensus 16 cRSpmAE~~~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~~~a~~~l~~~Gid~~~~ar~l~~~~~~~~DlIl~ 89 (161)
T 3jvi_A 16 CRSPAAEAVMKKVIQNHHLTEKYICDSAGTCSYHEGQQADSRMRKVGKSRGYQVDSISRPVVSSDFKNFDYIFA 89 (161)
T ss_dssp SHHHHHHHHHHHHHHHTTCGGGEEEEEEESCCTTTTCBCCHHHHHHHHHTTCCCCCBCCBCCHHHHHHCSEEEE
T ss_pred hHHHHHHHHHHHHHHHcCCCCcEEEEeeecCCcccCCCCCHHHHHHHHHcCcCCCCeeeECCHHHhcCCCEEEE
Confidence 568888888887654 443 688888888887666 4678889999998743221111234456787764
No 435
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=27.36 E-value=1.1e+02 Score=33.07 Aligned_cols=75 Identities=19% Similarity=0.357 Sum_probs=45.6
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch-HHHHHhh-hccEEEEceeeEecCC-CeecccchHHHHHHHHh--
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS-AVSYIMR-EVSKVIIGAHALLSNG-AVMSRAGTAQVSLVARA-- 625 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS-AVsyiM~-~VdkVLLGAdaVlaNG-~VvNKiGT~~VALaAK~-- 625 (717)
.++|.|+|-- -+..+++.|.+.|+.+++++-. ....+.. +.|.||| +|| +-.... ...+.++-+.
T Consensus 190 ~~~V~viD~G---~k~ni~r~L~~~G~~v~vvp~~~~~e~i~~~~~DGliL------sGGPgdp~~~-~~~~~~Ir~~~~ 259 (379)
T 1a9x_B 190 PFHVVAYDFG---AKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFL------SNGPGDPAPC-DYAITAIQKFLE 259 (379)
T ss_dssp CEEEEEEESS---CCHHHHHHHHHTTEEEEEEETTCCHHHHHTTCCSEEEE------CCCSBCSTTC-HHHHHHHHHHTT
T ss_pred CCEEEEEECC---ChHHHHHHHHHCCCEEEEEeccCCHHHHhhcCCCEEEE------eCCCCChHHH-HHHHHHHHHHHH
Confidence 4688888872 2367999999999999999743 2333432 5777766 222 111121 2344444433
Q ss_pred CCCcEEeccc
Q psy17541 626 FNVPVLAACE 635 (717)
Q Consensus 626 ~~VPVyV~cE 635 (717)
.++||+=+|=
T Consensus 260 ~~~PILGICl 269 (379)
T 1a9x_B 260 TDIPVFGICL 269 (379)
T ss_dssp SCCCEEEETH
T ss_pred cCCCEEEECc
Confidence 4799997663
No 436
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=27.35 E-value=1.6e+02 Score=25.26 Aligned_cols=79 Identities=11% Similarity=0.016 Sum_probs=40.8
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHhC-CC-cEEEEcch--HHHHHhh--hccEEEEceeeEecCCCeecccchHHHHHHHH
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVKH-QV-DCSYVLLS--AVSYIMR--EVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR 624 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~~-GI-~vTyI~DS--AVsyiM~--~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK 624 (717)
.++|+|+|..|... ..+...|... |. .|....+. ++..+-. ..|.||++.+.--. -|-..+..+-.
T Consensus 3 ~~~iLivdd~~~~~-~~l~~~L~~~~g~~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~-------~g~~~~~~l~~ 74 (154)
T 2qsj_A 3 LTVVLIVDDHHLIR-AGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDA-------EAIDGLVRLKR 74 (154)
T ss_dssp CEEEEEECSCHHHH-HHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC-------------CHHHHHHHHH
T ss_pred ccEEEEEcCCHHHH-HHHHHHHHhCCCceEEEEecCHHHHHHHHhccCCCCEEEEeCCCCCC-------chHHHHHHHHH
Confidence 46788888776432 3455566666 77 44444433 2333332 47999988653222 23333444433
Q ss_pred h-CCCcEEecccCC
Q psy17541 625 A-FNVPVLAACETH 637 (717)
Q Consensus 625 ~-~~VPVyV~cEty 637 (717)
. .++||++++...
T Consensus 75 ~~~~~~ii~ls~~~ 88 (154)
T 2qsj_A 75 FDPSNAVALISGET 88 (154)
T ss_dssp HCTTSEEEEC----
T ss_pred hCCCCeEEEEeCCC
Confidence 3 479999988654
No 437
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=27.29 E-value=2.6e+02 Score=27.87 Aligned_cols=100 Identities=17% Similarity=0.165 Sum_probs=55.9
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc--------hHHHHHhh--hcc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL--------SAVSYIMR--EVS 595 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D--------SAVsyiM~--~Vd 595 (717)
..+++|-|.+..+..++......|. +|++.+ |.+.|.. ..+...|+.+..+.. ..+-..+. ++.
T Consensus 86 ~~i~~~~g~t~a~~~~~~~~~~~gd--~Vl~~~--~~~~~~~--~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~ 159 (367)
T 3euc_A 86 MEVLLGNGSDEIISMLALAAARPGA--KVMAPV--PGFVMYA--MSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPA 159 (367)
T ss_dssp CEEEEEEHHHHHHHHHHHHTCCTTC--EEEEEE--SCSCCSC--HHHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCS
T ss_pred ceEEEcCCHHHHHHHHHHHHcCCCC--EEEEcC--CCHHHHH--HHHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCC
Confidence 4577777777776666555433443 455443 4444421 224567888888762 23333333 466
Q ss_pred EEEEceeeEecCCCeecccchHHHHHHHHhC--CCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGTAQVSLVARAF--NVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT~~VALaAK~~--~VPVyV 632 (717)
.|++- ..-...|.++..---..++-+|+.| |+.|++
T Consensus 160 ~v~~~-~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~ 197 (367)
T 3euc_A 160 IVYLA-YPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVV 197 (367)
T ss_dssp EEEEE-SSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEE
T ss_pred EEEEc-CCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEE
Confidence 66662 3323345555444444566678888 888775
No 438
>2a8y_A 5'-methylthioadenosine phosphorylase (MTAP); alpha/beta, beta sheet, beta barrel, transferase; HET: MTA; 1.45A {Sulfolobus solfataricus} PDB: 3t94_A* 1v4n_A
Probab=27.26 E-value=95 Score=31.61 Aligned_cols=73 Identities=11% Similarity=0.017 Sum_probs=43.0
Q ss_pred cCchHHHHHHHHHH-HcCCeeE---EEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCC
Q psy17541 533 GCSSLVEKILLTAH-EKGTKFR---VIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNG 608 (717)
Q Consensus 533 g~SStV~~vL~~A~-e~Gk~Fr---VIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG 608 (717)
-|+..+...+..+. +.|.+++ ||+.-+.|.|+-..-.+.|.+ . +|||+|=-.
T Consensus 136 ~~d~~L~~~~~~~a~~~g~~~~~~Gv~~~~~Gp~fet~ae~~~~~~------------------~-----~GadaV~Me- 191 (270)
T 2a8y_A 136 PFCNSLRKLAIETAKELNIKTHESGTYICIEGPRFSTRAESRTWRE------------------V-----YKADIIGMT- 191 (270)
T ss_dssp CSCHHHHHHHHHHHHHHTCCEESCCEEEEECCSSCCCHHHHHHHHH------------------T-----TCCCEEESS-
T ss_pred ccCHHHHHHHHHHHHHcCCeEEcceEEEEecCCEecCHHHHHHHHH------------------H-----cCCEEECCc-
Confidence 34555555555543 3354444 555556677764422333320 1 266666443
Q ss_pred CeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 609 AVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 609 ~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
|..+|.+|+++++||.+++--
T Consensus 192 -------~a~ea~vA~~~gi~~~~i~~V 212 (270)
T 2a8y_A 192 -------LVPEVNLACEAQMCYATIAMV 212 (270)
T ss_dssp -------HHHHHHHHHHTTCEEEEEEEE
T ss_pred -------HHHHHHHHHHCCCCEEEEEEE
Confidence 588999999999999987643
No 439
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=27.20 E-value=92 Score=31.88 Aligned_cols=71 Identities=21% Similarity=0.200 Sum_probs=45.1
Q ss_pred cCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCeec
Q psy17541 533 GCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMS 612 (717)
Q Consensus 533 g~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvN 612 (717)
-|+..+...+..+.+. ..--||+.-+-|.++-..-.+.|.. +|||+|=-.
T Consensus 159 ~~d~~L~~~~~~~a~~-~~~Gvy~~~~Gp~feT~aE~~~~~~------------------------~GadaVgMe----- 208 (268)
T 1g2o_A 159 AYSPRLRELARQSDPQ-LAEGVYAGLPGPHYETPAEIRMLQT------------------------LGADLVGMS----- 208 (268)
T ss_dssp SSCHHHHHHHHHHCTT-CEEEEEEECCCSSCCCHHHHHHHHH------------------------HTCSEEESS-----
T ss_pred ccCHHHHHHHHHHHHH-hCCCeEEEEeCCEEeCHHHHHHHHH------------------------cCCeEEecC-----
Confidence 4555556666655433 3445777777777775422222221 277777554
Q ss_pred ccchHHHHHHHHhCCCcEEecccC
Q psy17541 613 RAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 613 KiGT~~VALaAK~~~VPVyV~cEt 636 (717)
|.+.|.+|+++++||.+++--
T Consensus 209 ---~~~ea~lA~~~gi~~~~i~~V 229 (268)
T 1g2o_A 209 ---TVHETIAARAAGAEVLGVSLV 229 (268)
T ss_dssp ---SHHHHHHHHHTTCEEEEEEEE
T ss_pred ---HHHHHHHHHHcCCCEEEEEEE
Confidence 488999999999999987643
No 440
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=27.07 E-value=1.2e+02 Score=26.61 Aligned_cols=44 Identities=18% Similarity=0.264 Sum_probs=30.8
Q ss_pred HHHHHHHHHHcCCeeEEEEcC-CCCchhH--HHHHHHHHhCCCcEEEEc
Q psy17541 538 VEKILLTAHEKGTKFRVIIVD-GSPWYEG--KEMLRRLVKHQVDCSYVL 583 (717)
Q Consensus 538 V~~vL~~A~e~Gk~FrVIVvE-SRP~~EG--r~lA~~L~~~GI~vTyI~ 583 (717)
+..++..+ ++|++. |++.| +-|..-| ..+++.|.+.||++.+|+
T Consensus 69 ~~~i~~~~-~~G~~V-~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~viP 115 (117)
T 3hh1_A 69 VRQVIELL-EEGSDV-ALVTDAGTPAISDPGYTMASAAHAAGLPVVPVP 115 (117)
T ss_dssp HHHHHHHH-HTTCCE-EEEEETTSCGGGSTTHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHH-HCCCeE-EEEecCCcCeEeccHHHHHHHHHHCCCcEEEeC
Confidence 34444444 567764 44556 8888765 688899999999999886
No 441
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=27.05 E-value=2.2e+02 Score=27.18 Aligned_cols=78 Identities=14% Similarity=0.081 Sum_probs=0.0
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHh---hhccEEEEceeeEecCCCeecccchHHHHHHHHhC
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIM---REVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAF 626 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM---~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~ 626 (717)
...+|+|+|..|.. ...+...|...|+.|....+..-+.-+ ...|.||+ |.-+.+++ |--.+..+-..+
T Consensus 22 ~~~~ILivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~~dlvll--D~~lp~~~-----g~~~~~~lr~~~ 93 (250)
T 3r0j_A 22 PEARVLVVDDEANI-VELLSVSLKFQGFEVYTATNGAQALDRARETRPDAVIL--DVXMPGMD-----GFGVLRRLRADG 93 (250)
T ss_dssp SSCEEEEECSCHHH-HHHHHHHHHHTTCEEEEESSHHHHHHHHHHHCCSEEEE--ESCCSSSC-----HHHHHHHHHHTT
T ss_pred CCceEEEEECCHHH-HHHHHHHHHHCCCEEEEECCHHHHHHHHHhCCCCEEEE--eCCCCCCC-----HHHHHHHHHhcC
Q ss_pred -CCcEEeccc
Q psy17541 627 -NVPVLAACE 635 (717)
Q Consensus 627 -~VPVyV~cE 635 (717)
++||++++.
T Consensus 94 ~~~~ii~lt~ 103 (250)
T 3r0j_A 94 IDAPALFLTA 103 (250)
T ss_dssp CCCCEEEEEC
T ss_pred CCCCEEEEEC
No 442
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile}
Probab=27.02 E-value=1e+02 Score=30.63 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=37.0
Q ss_pred HHHHHHHHHcCCeeEEEEcCCCCchhH--HHHHHHHHhCCCcEEEEc-chHHHHHhh
Q psy17541 539 EKILLTAHEKGTKFRVIIVDGSPWYEG--KEMLRRLVKHQVDCSYVL-LSAVSYIMR 592 (717)
Q Consensus 539 ~~vL~~A~e~Gk~FrVIVvESRP~~EG--r~lA~~L~~~GI~vTyI~-DSAVsyiM~ 592 (717)
...|....++|+++-+ +.-+-|..-| ..+++.|.+.||++.+|+ .+++.++..
T Consensus 67 ~~~i~~~~~~g~~V~~-l~~GDP~i~~~~~~l~~~l~~~gi~veviPGiSS~~aa~a 122 (253)
T 4e16_A 67 IDVMREGIENNKSVVR-LQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVSSFLGAAS 122 (253)
T ss_dssp HHHHHHHHHTTCCEEE-EESBCTTTTCCHHHHHHHHHHHTCCEEEECCCCHHHHHHH
T ss_pred HHHHHHHHHCCCcEEE-EeCCCCccccCHHHHHHHHHHCCCCEEEECCHHHHHHHHH
Confidence 3444455556776544 4488888765 678889999999999999 566655543
No 443
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=27.00 E-value=98 Score=32.15 Aligned_cols=72 Identities=14% Similarity=0.125 Sum_probs=43.7
Q ss_pred ecCchHHHHHHHHHH-HcCCeeE--EEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCC
Q psy17541 532 YGCSSLVEKILLTAH-EKGTKFR--VIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNG 608 (717)
Q Consensus 532 yg~SStV~~vL~~A~-e~Gk~Fr--VIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG 608 (717)
+-|+.-+...+..+. +.|..++ ||+.-+-|.++-..-.+.|.. +|||+|=-.+
T Consensus 170 ~~~d~~L~~~a~~aA~~~gi~~~~Gvy~~~~Gp~feT~AE~~~~r~------------------------~GadaVgMe~ 225 (287)
T 3odg_A 170 NAYDKDLRADMAKIAQQLDIPLTEGVFVSYPGPCFETPAEIRMMQI------------------------IGGDVVGMSV 225 (287)
T ss_dssp TSSCHHHHHHHHHHHHHHTCCCEEEEEEECCCSSCCCHHHHHHHHH------------------------TTCSEEESSS
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEEEEEecCCccCCHHHHHHHHH------------------------cCCEEEeCcH
Confidence 344555555555443 3454443 566566777775421222221 2777775544
Q ss_pred CeecccchHHHHHHHHhCCCcEEeccc
Q psy17541 609 AVMSRAGTAQVSLVARAFNVPVLAACE 635 (717)
Q Consensus 609 ~VvNKiGT~~VALaAK~~~VPVyV~cE 635 (717)
.++|.+|+++++||.+++-
T Consensus 226 --------~pea~vA~~~gi~~~~I~~ 244 (287)
T 3odg_A 226 --------VPEVLSAAHCGLKVIALTA 244 (287)
T ss_dssp --------HHHHHHHHHHTCEEEEEEE
T ss_pred --------HHHHHHHHHcCCCEEEEEE
Confidence 8999999999999998763
No 444
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=26.97 E-value=50 Score=32.40 Aligned_cols=78 Identities=13% Similarity=0.146 Sum_probs=52.9
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHh-CCCcEEEEcc------hHHHHHhh--hccEEEEceeeEecCCCeecccchHHHHH
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVK-HQVDCSYVLL------SAVSYIMR--EVSKVIIGAHALLSNGAVMSRAGTAQVSL 621 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~-~GI~vTyI~D------SAVsyiM~--~VdkVLLGAdaVlaNG~VvNKiGT~~VAL 621 (717)
.|++|.+.+ +++.|.+ .||+|+.+.- ..+..+|. ++|+||-=-|-+ |.--...-.+.|=-
T Consensus 55 Gf~L~AT~g--------Ta~~L~e~~Gl~v~~v~k~~eGG~pqI~d~I~~geIdlVInt~dPl---~~~~h~~D~~~IRR 123 (178)
T 1vmd_A 55 KHELYATGT--------TGALLQEKLGLKVHRLKSGPLGGDQQIGAMIAEGKIDVLIFFWDPL---EPQAHDVDVKALIR 123 (178)
T ss_dssp TSEEEECHH--------HHHHHHHHHCCCCEECSCGGGTHHHHHHHHHHTTSCCEEEEECCSS---SCCTTSCCHHHHHH
T ss_pred CCEEEEchH--------HHHHHHHHhCceeEEEeecCCCCCchHHHHHHCCCccEEEEccCcc---CCCcccccHHHHHH
Confidence 688888765 7888988 9999999852 12555554 699998633200 32221344578889
Q ss_pred HHHhCCCcEEecccCCcc
Q psy17541 622 VARAFNVPVLAACETHKF 639 (717)
Q Consensus 622 aAK~~~VPVyV~cEtyKF 639 (717)
+|-.|+||++---.+-.+
T Consensus 124 ~A~~~~IP~~TnlatA~A 141 (178)
T 1vmd_A 124 IATVYNIPVAITRSTADF 141 (178)
T ss_dssp HHHHTTCCEESSHHHHHH
T ss_pred HHHHcCCCEEeCHHHHHH
Confidence 999999999975444443
No 445
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=26.96 E-value=1.5e+02 Score=30.04 Aligned_cols=57 Identities=16% Similarity=-0.019 Sum_probs=36.5
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL 584 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D 584 (717)
.+..|++||++|.+.+=..++.-|+..| -.+||+++..+.. +. .+.+.|.+..+-.+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~--~~---~~~~lGa~~~i~~~ 224 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDR--LA---LAREVGADAAVKSG 224 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHH--HH---HHHHTTCSEEEECS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHH--HH---HHHHcCCCEEEcCC
Confidence 4678999999998654444455555443 2489999876542 23 34556887665443
No 446
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=26.92 E-value=1.6e+02 Score=27.28 Aligned_cols=60 Identities=18% Similarity=0.247 Sum_probs=34.9
Q ss_pred HHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCeecccchHH----HHHHHHhCCCcEEecccC
Q psy17541 567 EMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQ----VSLVARAFNVPVLAACET 636 (717)
Q Consensus 567 ~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~----VALaAK~~~VPVyV~cEt 636 (717)
...+.|.+.|+.+.++.+.. .+.++|.+||+ |+--+..+-.. +.-..+..++||+-+|--
T Consensus 14 ~~~~~l~~~G~~~~~~~~~~---~~~~~dglil~-------GG~~~~~~~~~~~~~~~~~i~~~~~PilGIC~G 77 (186)
T 2ywj_A 14 EHEEAIKKAGYEAKKVKRVE---DLEGIDALIIP-------GGESTAIGKLMKKYGLLEKIKNSNLPILGTCAG 77 (186)
T ss_dssp HHHHHHHHTTSEEEEECSGG---GGTTCSEEEEC-------CSCHHHHHHHHHHTTHHHHHHTCCCCEEEETHH
T ss_pred HHHHHHHHCCCEEEEECChH---HhccCCEEEEC-------CCCchhhhhhhhccCHHHHHHhcCCcEEEECHH
Confidence 45688889999988887532 34567776664 33211111110 111233789999977743
No 447
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=26.87 E-value=2.1e+02 Score=30.92 Aligned_cols=103 Identities=21% Similarity=0.130 Sum_probs=52.8
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCC--eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c---------hHHHHHhh
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGT--KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L---------SAVSYIMR 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk--~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D---------SAVsyiM~ 592 (717)
..++++|-|.+..+..++......|. .-.|+|. .|.+.+. ...+...|..+..+. | ..+-..+.
T Consensus 153 ~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~--~p~y~~~--~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~ 228 (498)
T 3ihj_A 153 PDNIYLTTGASDGISTILKILVSGGGKSRTGVMIP--IPQYPLY--SAVISELDAIQVNYYLDEENCWALNVNELRRAVQ 228 (498)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEE--ESCCTHH--HHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHH
T ss_pred cccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEe--CCCchhH--HHHHHHcCCEEEEeeccccccCCCCHHHHHHHHH
Confidence 34688888877776665554433331 1244443 2555443 233444677666554 2 12333333
Q ss_pred h------ccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 593 E------VSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 593 ~------VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
. +..|+|- .-=-..|.+++.----.|+-+|+.|++.+++
T Consensus 229 ~~~~~~~~k~i~l~-np~NPTG~v~s~~~l~~i~~la~~~~~~li~ 273 (498)
T 3ihj_A 229 EAKDHCDPKVLCII-NPGNPTGQVQSRKCIEDVIHFAWEEKLFLLA 273 (498)
T ss_dssp HHTTTSEEEEEEEE-SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred hhhccCCCeEEEEE-CCCCCCCCcCCHHHHHHHHHHHHHcCcEEEE
Confidence 2 3344332 2212245555544445577778888887765
No 448
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=26.87 E-value=1.6e+02 Score=28.86 Aligned_cols=99 Identities=11% Similarity=0.141 Sum_probs=64.2
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh------
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR------ 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~------ 592 (717)
.|.+||+.|-|+-+-..+.. ..+.| .+|++++.|.......++.+|...|..+.++. | .++..++.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLG--AKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788888888766555544 34445 58888888877666778888988888877664 3 23444444
Q ss_pred -hccEEEEceeeEecCCCe-------------ecccchHHHHHHHHhC
Q psy17541 593 -EVSKVIIGAHALLSNGAV-------------MSRAGTAQVSLVARAF 626 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~V-------------vNKiGT~~VALaAK~~ 626 (717)
++|.+|--|- +...|.+ +|-.|++.++-.+..+
T Consensus 95 g~id~lvnnAg-~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 141 (270)
T 3is3_A 95 GHLDIAVSNSG-VVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRH 141 (270)
T ss_dssp SCCCEEECCCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCEEEECCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 5677776653 2233331 4667888877666554
No 449
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=26.82 E-value=1.7e+02 Score=30.73 Aligned_cols=102 Identities=7% Similarity=0.138 Sum_probs=53.9
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcC-CeeEEEEcCCCCchhHHHH--HHHHHhCCCcE-----EEEcc--------hHHH
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKG-TKFRVIIVDGSPWYEGKEM--LRRLVKHQVDC-----SYVLL--------SAVS 588 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~G-k~FrVIVvESRP~~EGr~l--A~~L~~~GI~v-----TyI~D--------SAVs 588 (717)
.+.+++|-|.+..+..++....+.| .+-+|++. .|.+-+... ...+...|+.+ .+++. ..+-
T Consensus 128 ~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~--~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~ 205 (465)
T 3e9k_A 128 EKEIALMNALTVNLHLLMLSFFKPTPKRYKILLE--AKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDIL 205 (465)
T ss_dssp GGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEE--TTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHH
T ss_pred cCCEEEECCHHHHHHHHHHHhccccCCCCEEEEc--CCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHH
Confidence 3467777777766555555543333 23445553 355655322 22455578764 33321 2344
Q ss_pred HHhh----hccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 589 YIMR----EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 589 yiM~----~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
..+. ++..| +-.+.=...|.+.. + ..|+-+|+.||++|++
T Consensus 206 ~~i~~~~~~~~lv-~~~~~~n~tG~~~~-l--~~i~~la~~~g~~vi~ 249 (465)
T 3e9k_A 206 EVIEKEGDSIAVI-LFSGVHFYTGQHFN-I--PAITKAGQAKGCYVGF 249 (465)
T ss_dssp HHHHHHGGGEEEE-EEESBCTTTCBBCC-H--HHHHHHHHHTTCEEEE
T ss_pred HHHHhcCCCeEEE-EEeCcccCcceeec-H--HHHHHHHHHcCCEEEE
Confidence 4443 33333 33332233455543 2 5677889999998876
No 450
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=26.82 E-value=1.4e+02 Score=30.93 Aligned_cols=56 Identities=18% Similarity=0.116 Sum_probs=36.0
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL 583 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~ 583 (717)
.+..|++||++|.+.+=..++..|+..|-. +|++++..+.. +.+ +.+.|.+..+-.
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~-~Vi~~~~~~~~--~~~---a~~lGa~~vi~~ 245 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGAS-RIIGIDIDSKK--YET---AKKFGVNEFVNP 245 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCS-CEEEECSCTTH--HHH---HHTTTCCEEECG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEcCCHHH--HHH---HHHcCCcEEEcc
Confidence 367899999999865444455555555532 78888877653 233 445687765543
No 451
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=26.80 E-value=4.7e+02 Score=25.83 Aligned_cols=100 Identities=12% Similarity=0.099 Sum_probs=62.2
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh------
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR------ 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~------ 592 (717)
.|.+||+.|-|+-+-..|.. ..+.| .+|++++-++......+...+...|..+.++. | .++..++.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEG--ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45688888888766555544 34455 57888776655444566667777888887763 3 23444443
Q ss_pred -hccEEEEceeeEecCCCe-------------ecccchHHHHHHHHhC
Q psy17541 593 -EVSKVIIGAHALLSNGAV-------------MSRAGTAQVSLVARAF 626 (717)
Q Consensus 593 -~VdkVLLGAdaVlaNG~V-------------vNKiGT~~VALaAK~~ 626 (717)
++|.||--|-.....+.+ +|-.|++.+.-.+..+
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 171 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSH 171 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 578888766433333322 3667888887777654
No 452
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=26.78 E-value=1.9e+02 Score=30.30 Aligned_cols=68 Identities=18% Similarity=0.249 Sum_probs=38.5
Q ss_pred CCeeEEEEc-CCCCchhHHHHHHHHHhCCCcEEEEcc---hHHHHHhhhccEEEEceeeEecCCCeecccchHHHHHHHH
Q psy17541 549 GTKFRVIIV-DGSPWYEGKEMLRRLVKHQVDCSYVLL---SAVSYIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR 624 (717)
Q Consensus 549 Gk~FrVIVv-ESRP~~EGr~lA~~L~~~GI~vTyI~D---SAVsyiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK 624 (717)
...+.+++. -..|. -+..++++....-++.++.- ..+..+|..+|.|+..+ | +.+ +=|-
T Consensus 261 ~~~~~~v~~~g~~~~--~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~vv~~S------G-------g~~--~EA~ 323 (396)
T 3dzc_A 261 HPECQILYPVHLNPN--VREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDS------G-------GIQ--EEAP 323 (396)
T ss_dssp CTTEEEEEECCBCHH--HHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSEEEESC------S-------GGG--TTGG
T ss_pred CCCceEEEEeCCChH--HHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCEEEECC------c-------cHH--HHHH
Confidence 345776664 22221 23344443222235666421 35678999999986543 3 222 5667
Q ss_pred hCCCcEEec
Q psy17541 625 AFNVPVLAA 633 (717)
Q Consensus 625 ~~~VPVyV~ 633 (717)
.+|+|+++.
T Consensus 324 a~G~PvV~~ 332 (396)
T 3dzc_A 324 SLGKPVLVM 332 (396)
T ss_dssp GGTCCEEEC
T ss_pred HcCCCEEEc
Confidence 789999985
No 453
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=26.73 E-value=2.5e+02 Score=28.29 Aligned_cols=100 Identities=9% Similarity=0.062 Sum_probs=50.1
Q ss_pred CCeEEEecCchHHHHHHHHHH--HcCCeeEEEEcCCCCchhHH-HHHHHHHhCCCc------------EEEEc--c-hHH
Q psy17541 526 DDVILTYGCSSLVEKILLTAH--EKGTKFRVIIVDGSPWYEGK-EMLRRLVKHQVD------------CSYVL--L-SAV 587 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~--e~Gk~FrVIVvESRP~~EGr-~lA~~L~~~GI~------------vTyI~--D-SAV 587 (717)
..+++|.|-+..+..+|..+. ..|. +|++.+ |.+.|. ..+..+ .|.+ +..+. | ..+
T Consensus 105 ~~v~~~~gg~~a~~~al~~~~~~~~~~--~vi~~~--~~y~~~~~~~~~~--~g~~~~~~~~~p~~~~~~~~~~~d~~~l 178 (395)
T 1vef_A 105 NRVFPVNSGTEANEAALKFARAHTGRK--KFVAAM--RGFSGRTMGSLSV--TWEPKYREPFLPLVEPVEFIPYNDVEAL 178 (395)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHSCC--EEEEET--TCCCCSSHHHHHT--CCCHHHHGGGCSCSSCEEEECTTCHHHH
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHhCCC--eEEEEc--CCcCCCchhhhhh--cCCcccccccCCCCCCeeEeCCCcHHHH
Confidence 357777777777666665442 3333 567665 333331 111122 2322 44443 2 233
Q ss_pred HHHhhhccEEEEceeeEecC-CCeecccc-hHHHHHHHHhCCCcEEe
Q psy17541 588 SYIMREVSKVIIGAHALLSN-GAVMSRAG-TAQVSLVARAFNVPVLA 632 (717)
Q Consensus 588 syiM~~VdkVLLGAdaVlaN-G~VvNKiG-T~~VALaAK~~~VPVyV 632 (717)
-..+..-.++|+ ...+..+ |.++..-+ -..|+-+|++||++|+|
T Consensus 179 ~~~i~~~~~~v~-~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~ 224 (395)
T 1vef_A 179 KRAVDEETAAVI-LEPVQGEGGVRPATPEFLRAAREITQEKGALLIL 224 (395)
T ss_dssp HHHCCTTEEEEE-ECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHhccCEEEEE-EeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEE
Confidence 334432234444 3344433 44544333 34577889999998876
No 454
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=26.68 E-value=2.7e+02 Score=27.50 Aligned_cols=76 Identities=11% Similarity=0.035 Sum_probs=50.8
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh------
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR------ 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~------ 592 (717)
.|.+||+-|-|+-+-..|.. ..+.| .+|++++.|.......++.+|...|..+.++. | .++..++.
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASG--FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC--CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 46788888887766555544 34445 57888886665556778888888888877763 2 33444444
Q ss_pred -hccEEEEcee
Q psy17541 593 -EVSKVIIGAH 602 (717)
Q Consensus 593 -~VdkVLLGAd 602 (717)
.+|.||--|-
T Consensus 106 g~iD~lvnnAg 116 (280)
T 4da9_A 106 GRIDCLVNNAG 116 (280)
T ss_dssp SCCCEEEEECC
T ss_pred CCCCEEEECCC
Confidence 5788887764
No 455
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=26.64 E-value=66 Score=31.26 Aligned_cols=92 Identities=12% Similarity=0.133 Sum_probs=48.4
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhh--hccEEEEceeeEe
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMR--EVSKVIIGAHALL 605 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~--~VdkVLLGAdaVl 605 (717)
+||+.|-+..|-..|...... ..++|+++.-.+.. +.-..++..++. .+|.||--|-...
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~D-----------------~~d~~~~~~~~~~~~~d~vi~~a~~~~ 68 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNP-EEYDIYPFDKKLLD-----------------ITNISQVQQVVQEIRPHIIIHCAAYTK 68 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCT-TTEEEEEECTTTSC-----------------TTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHh-CCCEEEEecccccC-----------------CCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 567777666655555444321 22566665432210 001123444444 3666654442221
Q ss_pred cCC--------CeecccchHHHHHHHHhCCCcEEecccCC
Q psy17541 606 SNG--------AVMSRAGTAQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 606 aNG--------~VvNKiGT~~VALaAK~~~VPVyV~cEty 637 (717)
.+. .-+|-.|+..+.-+|+.+++.|+.+.-..
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~ 108 (287)
T 3sc6_A 69 VDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDY 108 (287)
T ss_dssp HHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred hHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhh
Confidence 110 12466789999999999999876665443
No 456
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=26.62 E-value=1.8e+02 Score=24.41 Aligned_cols=80 Identities=10% Similarity=0.084 Sum_probs=47.6
Q ss_pred CeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHH--
Q psy17541 550 TKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--VSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR-- 624 (717)
Q Consensus 550 k~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--VsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK-- 624 (717)
...+|+|+|..|... ..+...|...|+.|....+.. +..+-. ..|.||+..+. .+ .-|-..+..+.+
T Consensus 6 ~~~~iLivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l--~~-----~~g~~~~~~l~~~~ 77 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVR-IAVKTILSDAGFHIISADSGGQCIDLLKKGFSGVVLLDIMM--PG-----MDGWDTIRAILDNS 77 (142)
T ss_dssp CCCEEEEECSCHHHH-HHHHHHHHHTTCEEEEESSHHHHHHHHHTCCCEEEEEESCC--SS-----SCHHHHHHHHHHTT
T ss_pred CCCeEEEEcCCHHHH-HHHHHHHHHCCeEEEEeCCHHHHHHHHHhcCCCEEEEeCCC--CC-----CCHHHHHHHHHhhc
Confidence 456888888776442 345666777888877666533 333322 47888887543 21 224334444443
Q ss_pred -hCCCcEEecccCC
Q psy17541 625 -AFNVPVLAACETH 637 (717)
Q Consensus 625 -~~~VPVyV~cEty 637 (717)
..++||++++...
T Consensus 78 ~~~~~pii~~s~~~ 91 (142)
T 3cg4_A 78 LEQGIAIVMLTAKN 91 (142)
T ss_dssp CCTTEEEEEEECTT
T ss_pred ccCCCCEEEEECCC
Confidence 3579999987654
No 457
>3mhs_B Protein SUS1; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3fwc_C 3fwb_C 3kjl_A 3m99_C 3mhh_B 3kik_A 4fip_B 4fjc_B 4fk5_B
Probab=26.50 E-value=1.3e+02 Score=26.68 Aligned_cols=55 Identities=9% Similarity=0.187 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhcCchhhhHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Q psy17541 447 GFEERLGPAMSYLNKCRPHSVSMLNAVKHFKSHLTQLPNDITDTQARLRLKEVIATYIHE 506 (717)
Q Consensus 447 ~L~~~Lk~ai~~L~~aRPtsVSmgNAIR~Lk~~I~~l~~~~s~ee~Ke~Lie~IdefI~E 506 (717)
+|.+.++..+......+ ..++....+..|.-..+..- ++++|..|+..|..|+.+
T Consensus 37 GW~Devr~~~r~~i~~~-~~vt~~~L~~~I~P~Ar~~V----P~~VK~Ell~~Ir~fL~~ 91 (96)
T 3mhs_B 37 GWVDKVKDLTKSEMNIN-ESTNFTQILSTVEPKALEMV----SDSTRETVLKQIREFLEE 91 (96)
T ss_dssp THHHHHHHHHHHHHHHH-TCCCHHHHHHHHHHHHHHTS----CHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhc-CCCCHHHHHHHHhHHHHHHC----CHHHHHHHHHHHHHHHHH
Confidence 57788888887776655 67788888888887776643 378999999999999943
No 458
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=26.44 E-value=1.6e+02 Score=30.25 Aligned_cols=54 Identities=13% Similarity=0.005 Sum_probs=35.4
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHc-CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEK-GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~-Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
.+..|++||++|-+.+=..++..|+.. |- +||++++.+. -+.++ .+.|.+..+-
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~Ga--~Vi~~~~~~~--~~~~~---~~lGa~~vi~ 237 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPA--TVIALDVKEE--KLKLA---ERLGADHVVD 237 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCC--EEEEEESSHH--HHHHH---HHTTCSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEeCCHH--HHHHH---HHhCCCEEEe
Confidence 477899999999965434455566656 64 7999987653 22333 4567765443
No 459
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=26.40 E-value=42 Score=29.97 Aligned_cols=28 Identities=11% Similarity=0.074 Sum_probs=12.8
Q ss_pred EEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 553 RVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 553 rVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
.|+|+=+-|- |..+|..|.+.|++|+++
T Consensus 4 dV~IIGaGpa--GL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 4 PIAIIGTGIA--GLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CEEEECCSHH--HHHHHHHHHHTTCCEEEE
T ss_pred CEEEECcCHH--HHHHHHHHHHCCCCEEEE
Confidence 3444444332 444455555555555444
No 460
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=26.32 E-value=98 Score=26.12 Aligned_cols=35 Identities=14% Similarity=0.236 Sum_probs=25.1
Q ss_pred CeeEEEEcCCC-CchhHHHHHHHHHh--CC--CcEEEEcc
Q psy17541 550 TKFRVIIVDGS-PWYEGKEMLRRLVK--HQ--VDCSYVLL 584 (717)
Q Consensus 550 k~FrVIVvESR-P~~EGr~lA~~L~~--~G--I~vTyI~D 584 (717)
..+.++++|-. |...|..+++.|.+ .+ +++.+++.
T Consensus 50 ~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 89 (142)
T 3cg4_A 50 GFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTA 89 (142)
T ss_dssp CCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEEC
Confidence 45888888854 77889999999988 43 45544443
No 461
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=26.32 E-value=1.4e+02 Score=28.08 Aligned_cols=106 Identities=12% Similarity=0.110 Sum_probs=58.5
Q ss_pred CCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh-------
Q psy17541 526 DDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR------- 592 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~------- 592 (717)
|.+||+.|-|+-+-..|.. ..+.| .+|+++..|.......+...|...|-.+.++. | .++..++.
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G--~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAG--CKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4577888877766554443 34445 56777655654444566667766666665543 3 34444444
Q ss_pred hccEEEEceeeEecCCC-------------eecccchHHHHHHHHhC----CCcEEecc
Q psy17541 593 EVSKVIIGAHALLSNGA-------------VMSRAGTAQVSLVARAF----NVPVLAAC 634 (717)
Q Consensus 593 ~VdkVLLGAdaVlaNG~-------------VvNKiGT~~VALaAK~~----~VPVyV~c 634 (717)
.+|.||--|- +...+. -+|-.|+..+.-.+..+ +...+|..
T Consensus 79 ~id~li~~Ag-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ 136 (244)
T 1edo_A 79 TIDVVVNNAG-ITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINI 136 (244)
T ss_dssp CCSEEEECCC-CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEECCC-CCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 4787776653 222221 13566777766555442 44444443
No 462
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=26.32 E-value=70 Score=30.07 Aligned_cols=75 Identities=12% Similarity=0.072 Sum_probs=42.6
Q ss_pred EEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCeecc-------cchHHHHHHHHh
Q psy17541 553 RVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVMSR-------AGTAQVSLVARA 625 (717)
Q Consensus 553 rVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~VvNK-------iGT~~VALaAK~ 625 (717)
+|.|++-.-.+ ......|.+.|+.+.++.... -+.++|.|+|+ |+--.. .+...+...+..
T Consensus 3 ~I~il~~~~~~--~~~~~~l~~~g~~~~~~~~~~---~l~~~d~iil~-------GG~~~~~~~~~~~~~~~~~i~~~~~ 70 (196)
T 2nv0_A 3 TIGVLGLQGAV--REHIHAIEACGAAGLVVKRPE---QLNEVDGLILP-------GGESTTMRRLIDTYQFMEPLREFAA 70 (196)
T ss_dssp EEEEECSSSCC--HHHHHHHHHTTCEEEEECSGG---GGGGCSEEEEC-------CSCHHHHHHHHHHTTCHHHHHHHHH
T ss_pred EEEEEEccCCc--HHHHHHHHHCCCEEEEeCChH---HHhhCCEEEEC-------CCChhhHHHHhhhHHHHHHHHHHHH
Confidence 56666642112 234588888999998887532 24567777665 332111 121222223345
Q ss_pred CCCcEEecccCCcc
Q psy17541 626 FNVPVLAACETHKF 639 (717)
Q Consensus 626 ~~VPVyV~cEtyKF 639 (717)
.++||+-+|--+-+
T Consensus 71 ~~~pilgIC~G~q~ 84 (196)
T 2nv0_A 71 QGKPMFGTCAGLII 84 (196)
T ss_dssp TTCCEEEETHHHHH
T ss_pred CCCcEEEECHHHHH
Confidence 79999988865543
No 463
>2amh_A Septum formation protein MAF homologue, putative; domain alpha-beta motif, structural genomics, PSI, protein structure initiative; 2.00A {Trypanosoma brucei} SCOP: c.51.4.2
Probab=26.24 E-value=3e+02 Score=27.22 Aligned_cols=99 Identities=12% Similarity=0.104 Sum_probs=56.7
Q ss_pred eEEEecCchHHHHHHHH-HHH-cCCeeEEEEc---CCC-CchhHHHHHHHHHhCCCcEEEEcchHHHHHhhh--c----c
Q psy17541 528 VILTYGCSSLVEKILLT-AHE-KGTKFRVIIV---DGS-PWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMRE--V----S 595 (717)
Q Consensus 528 vILTyg~SStV~~vL~~-A~e-~Gk~FrVIVv---ESR-P~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~--V----d 595 (717)
.||..+.+|--+.-|+. +.- .|..|.|+.. |+. +...-..++.+|+...- .++..-+.. - +
T Consensus 10 ~l~ILAS~SPrR~eLL~~~~~~~gi~f~v~~~~iDE~~~~~~~p~~~v~~lA~~KA-------~av~~~~~~~~~~~~~~ 82 (207)
T 2amh_A 10 RTMIIGTSSAFRANVLREHFGDRFRNFVLLPPDIDEKAYRAADPFELTESIARAKM-------KAVLEKARQHSPPISGP 82 (207)
T ss_dssp CEEEECCCCHHHHHHHHHHHTTTCSEEEECCCCCCGGGCCCSSHHHHHHHHHHHHH-------HHHHHHHHTC------C
T ss_pred cEEEEccCCHHHHHHHHhhhhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH-------HHHHHHhcccccccCCC
Confidence 34356555544444443 321 1788998854 332 22222456666664321 122222211 1 4
Q ss_pred EEEEceeeEec-CCCeecccchHHHH--HHHHhCCCcEEec
Q psy17541 596 KVIIGAHALLS-NGAVMSRAGTAQVS--LVARAFNVPVLAA 633 (717)
Q Consensus 596 kVLLGAdaVla-NG~VvNKiGT~~VA--LaAK~~~VPVyV~ 633 (717)
.++||||.|+. ||.++.|-.+..-| |+..-.|....|.
T Consensus 83 ~~VIgaDTvV~~~g~IlgKP~~~e~A~~mL~~lsG~~h~v~ 123 (207)
T 2amh_A 83 AIALTFDQVVVKGDEVREKPLSTEQCRSFIASYSGGGVRTV 123 (207)
T ss_dssp EEEEEEEEEEEETTEEECSCSSHHHHHHHHHHHTTSEEEEE
T ss_pred CEEEEECeEEEECCEEcCCCCCHHHHHHHHHHhCCCcEEEE
Confidence 58999999986 99999999998766 6666666555443
No 464
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=26.20 E-value=1.2e+02 Score=30.61 Aligned_cols=53 Identities=17% Similarity=0.155 Sum_probs=37.2
Q ss_pred HHHHHHHHHcCCeeEEEEcCCCCchhH--HHHHHHHHhCCCcEEEEc-chHHHHHhh
Q psy17541 539 EKILLTAHEKGTKFRVIIVDGSPWYEG--KEMLRRLVKHQVDCSYVL-LSAVSYIMR 592 (717)
Q Consensus 539 ~~vL~~A~e~Gk~FrVIVvESRP~~EG--r~lA~~L~~~GI~vTyI~-DSAVsyiM~ 592 (717)
...|.....+|+++ |++.-+-|..-| ..+++.|.+.||++.+|+ .+++.++..
T Consensus 66 ~~~i~~~~~~G~~V-a~L~~GDP~iyg~~~~l~~~l~~~gi~veviPGiSs~~aaaA 121 (264)
T 3ndc_A 66 IDTIAEAHAAGQDV-ARLHSGDLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAAA 121 (264)
T ss_dssp HHHHHHHHHHTCCE-EEEESBCTTSSCSHHHHHHHHHHTTCCEEEECCCCHHHHHHH
T ss_pred HHHHHHHHHCCCeE-EEEeCCCCccccHHHHHHHHHHhCCCCEEEeCCHHHHHHHHH
Confidence 34444444567765 444578898765 678899999999999999 566655543
No 465
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=26.15 E-value=1.6e+02 Score=29.91 Aligned_cols=89 Identities=16% Similarity=0.143 Sum_probs=50.0
Q ss_pred CeEEEecCchHHHHHHHHH-HHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch---------HHHHHhh-hcc
Q psy17541 527 DVILTYGCSSLVEKILLTA-HEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS---------AVSYIMR-EVS 595 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A-~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS---------AVsyiM~-~Vd 595 (717)
.+|+|-|-+..+..+|..+ ...|. +|++. .|.+.+... .+...|+.+.++... .+-..+. ++.
T Consensus 73 ~~i~~~~gt~al~~~l~~~~~~~gd--~vl~~--~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 146 (391)
T 3dr4_A 73 HAIACNNGTTALHLALVAMGIGPGD--EVIVP--SLTYIASAN--SVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTK 146 (391)
T ss_dssp EEEEESSHHHHHHHHHHHHTCCTTC--EEEEE--SSSCTHHHH--HHHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEE
T ss_pred cEEEeCCHHHHHHHHHHHcCCCCcC--EEEEC--CCchHHHHH--HHHHCCCEEEEEecCccccCcCHHHHHHhcCCCce
Confidence 5677766666666566555 33333 45554 456666433 344579888887643 1111121 223
Q ss_pred EEEEceeeEecCCCeecccch----HHHHHHHHhCCCcEEe
Q psy17541 596 KVIIGAHALLSNGAVMSRAGT----AQVSLVARAFNVPVLA 632 (717)
Q Consensus 596 kVLLGAdaVlaNG~VvNKiGT----~~VALaAK~~~VPVyV 632 (717)
.|+ +.|..|. -.|+-+|+.+|++|++
T Consensus 147 ~v~-----------~~n~tG~~~~~~~i~~l~~~~~~~li~ 176 (391)
T 3dr4_A 147 AIM-----------PVHLYGQICDMDPILEVARRHNLLVIE 176 (391)
T ss_dssp EEC-----------CBCGGGCCCCHHHHHHHHHHTTCEEEE
T ss_pred EEE-----------EECCCCChhhHHHHHHHHHHcCCEEEE
Confidence 333 1234443 4577889999998887
No 466
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=26.11 E-value=96 Score=27.48 Aligned_cols=68 Identities=12% Similarity=0.187 Sum_probs=38.9
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEc
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIG 600 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLG 600 (717)
.|..|+.+|.+..-..++..+...| ++|+|.+-.+.. ...++..+ |+++. ....+..++.++|.||..
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g--~~v~v~~r~~~~-~~~~a~~~---~~~~~--~~~~~~~~~~~~Divi~a 87 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQ--YKVTVAGRNIDH-VRAFAEKY---EYEYV--LINDIDSLIKNNDVIITA 87 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTT--CEEEEEESCHHH-HHHHHHHH---TCEEE--ECSCHHHHHHTCSEEEEC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEcCCHHH-HHHHHHHh---CCceE--eecCHHHHhcCCCEEEEe
Confidence 4889999998776555554444444 557777654421 23344443 44433 333445556778877654
No 467
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=26.04 E-value=2.8e+02 Score=28.76 Aligned_cols=99 Identities=14% Similarity=0.080 Sum_probs=48.7
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch------------------HHH
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS------------------AVS 588 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS------------------AVs 588 (717)
++|+|.|-+..+..+|..+...|. ++. .|.+-|. +...+...|..+.++... .+-
T Consensus 92 ~~~~~~~gt~a~~~al~~l~~~gd----i~~--~~~~~~~-~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~ 164 (456)
T 2ez2_A 92 HIVPTHQGRGAENLLSQLAIKPGQ----YVA--GNMYFTT-TRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQ 164 (456)
T ss_dssp EEEEESSHHHHHHHHHHHHCCTTC----EEE--ESSCCHH-HHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHH
T ss_pred cEEEeCCcHHHHHHHHHHhCCCCC----Eec--cccccch-hHHHHHHcCCEEEEecccccccccccccccCCCCHHHHH
Confidence 577777777766666655544454 332 2444221 123344567776665321 222
Q ss_pred HHhhhcc----EEEEceeeEe-cCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 589 YIMREVS----KVIIGAHALL-SNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 589 yiM~~Vd----kVLLGAdaVl-aNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
..+.+-+ ++|+=....- ..|.++.+-=--.|+-+|++|+++|++
T Consensus 165 ~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~ 213 (456)
T 2ez2_A 165 KLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFY 213 (456)
T ss_dssp HHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEE
Confidence 3333222 2222111111 234333322234677788999999887
No 468
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=26.01 E-value=78 Score=30.18 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=34.7
Q ss_pred EEEecCc-hHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 529 ILTYGCS-SLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 529 ILTyg~S-StV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
|.+|-.+ .-|...|..|+++|..++|++... ........+..|...|+.+.+.
T Consensus 76 i~~Y~~~~~~I~~aL~~Aa~RGV~VRii~D~~-~~~~~~~~~~~~~~~~~~~~~~ 129 (220)
T 4gel_A 76 LAIYTFTSLFLADSIKRALQRGVIIRIISDGE-MVYSKGSQISMLAQLGVPVRVP 129 (220)
T ss_dssp EECSCBCCHHHHHHHHHHHHHTCEEEEECCTT-TTTSTTCHHHHHHHTTCCEEEC
T ss_pred EEEEEeCCHHHHHHHHHHHHcCCeEEEEEech-hhhhhHHHHHHHHhcCCcEEee
Confidence 4445444 567888999999999999987443 2222233456677778776553
No 469
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=26.00 E-value=3.5e+02 Score=27.19 Aligned_cols=105 Identities=15% Similarity=0.154 Sum_probs=55.5
Q ss_pred CCCeEEEecCchHHHHHHHHHHHc--------CCeeEEEEcCCCCchhHH-HHHHHHHhC----------CCcEEEEcc-
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEK--------GTKFRVIIVDGSPWYEGK-EMLRRLVKH----------QVDCSYVLL- 584 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~--------Gk~FrVIVvESRP~~EGr-~lA~~L~~~----------GI~vTyI~D- 584 (717)
...+++|-|-+..+..+|..+... ...-+|++.+ |.+.|. ..+..+... ..++..+..
T Consensus 93 ~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (392)
T 3ruy_A 93 KEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCE--DNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG 170 (392)
T ss_dssp CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEET--TCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT
T ss_pred CCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEc--CCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc
Confidence 346777777777777777655433 1122455533 334442 222222211 113555542
Q ss_pred --hHHHHHhh-hccEEEEceeeEecCCCeecccc-hHHHHHHHHhCCCcEEe
Q psy17541 585 --SAVSYIMR-EVSKVIIGAHALLSNGAVMSRAG-TAQVSLVARAFNVPVLA 632 (717)
Q Consensus 585 --SAVsyiM~-~VdkVLLGAdaVlaNG~VvNKiG-T~~VALaAK~~~VPVyV 632 (717)
..+-..+. ++..|++-. .--..|.++..-. -..|+-+|+.|+++|++
T Consensus 171 d~~~l~~~l~~~~~~v~~~~-~~nptG~~~~~~~~l~~i~~l~~~~~~~li~ 221 (392)
T 3ruy_A 171 DLEALKAAITPNTAAFILEP-IQGEAGINIPPAGFLKEALEVCKKENVLFVA 221 (392)
T ss_dssp CHHHHHHHCCTTEEEEEECS-SBSTTTSBCCCTTHHHHHHHHHHTTTCEEEE
T ss_pred cHHHHHHHhccCeEEEEEeC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 23444443 455555533 2223466666666 66788899999998886
No 470
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=25.96 E-value=89 Score=30.43 Aligned_cols=94 Identities=13% Similarity=0.068 Sum_probs=54.1
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhh--ccEEEEceeeEe
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMRE--VSKVIIGAHALL 605 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~--VdkVLLGAdaVl 605 (717)
+||+.|-+..|-..|.....+| ++|++++-++. .+.+-+....++..++.. +|.||--|-...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~g--~~V~~~~r~~~-------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~ 66 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLAPV--GNLIALDVHSK-------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTA 66 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTTTT--SEEEEECTTCS-------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred eEEEECCCCHHHHHHHHHhhcC--CeEEEeccccc-------------cccccCCCHHHHHHHHHhcCCCEEEECcccCC
Confidence 5778888777666665544333 67777765541 111111112345555655 777776553221
Q ss_pred c---CCC-----eecccchHHHHHHHHhCCCcEEecccC
Q psy17541 606 S---NGA-----VMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 606 a---NG~-----VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
. ... -+|-.||..++-+|+..++.|+.+.-.
T Consensus 67 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 105 (299)
T 1n2s_A 67 VDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTD 105 (299)
T ss_dssp HHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEG
T ss_pred HhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 0 001 246788999999999999876655543
No 471
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=25.92 E-value=1.1e+02 Score=30.53 Aligned_cols=30 Identities=33% Similarity=0.444 Sum_probs=11.9
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCC
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGS 560 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESR 560 (717)
+||+.|.. ....++..|.+.| ++|++++..
T Consensus 4 ~Ililg~g-~~~~l~~a~~~~G--~~v~~~~~~ 33 (334)
T 2r85_A 4 RIATYASH-SALQILKGAKDEG--FETIAFGSS 33 (334)
T ss_dssp EEEEESST-THHHHHHHHHHTT--CCEEEESCG
T ss_pred EEEEECCh-hHHHHHHHHHhCC--CEEEEEECC
Confidence 34444433 2233444443333 344444443
No 472
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=25.90 E-value=1.2e+02 Score=31.88 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=43.7
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchh------HHHHHHHHHhCCCcEEEEc-chHHHHHhhhccEEE
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYE------GKEMLRRLVKHQVDCSYVL-LSAVSYIMREVSKVI 598 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~E------Gr~lA~~L~~~GI~vTyI~-DSAVsyiM~~VdkVL 598 (717)
+..|+++|.+-+-..+-..+.+.|.++.|+....+++.. +..+.+.|.+.||.+..-. ...++..+ .+|.||
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~ig~~~-~~D~vv 224 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEMGDLI-RSSCVI 224 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCGGGCHHHH-HHSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEEEEcCeEE-ecCeEE
Confidence 567888888766556666666667655444333443321 2356667778888764411 12222222 489998
Q ss_pred Ecee
Q psy17541 599 IGAH 602 (717)
Q Consensus 599 LGAd 602 (717)
++.-
T Consensus 225 ~a~G 228 (385)
T 3klj_A 225 TAVG 228 (385)
T ss_dssp ECCC
T ss_pred ECcC
Confidence 8653
No 473
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A
Probab=25.90 E-value=98 Score=31.65 Aligned_cols=72 Identities=18% Similarity=0.096 Sum_probs=45.4
Q ss_pred ecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceeeEecCCCee
Q psy17541 532 YGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHALLSNGAVM 611 (717)
Q Consensus 532 yg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAdaVlaNG~Vv 611 (717)
.-|+.-+...+..+.+ ...--||+.-+-|.++-..-.+.|.. +|||+|=-.
T Consensus 157 ~~~d~~L~~~~~~~a~-~~~~Gvy~~~~Gp~feT~aE~~~~r~------------------------~Gad~VgMe---- 207 (266)
T 1qe5_A 157 DVYSPRLRELAHRVDP-TLPEGVYAQFPGPHYETPAEVRMAGI------------------------LGADLVGMS---- 207 (266)
T ss_dssp TSBCHHHHHHHHHHCT-TCCEEEEEECCCSSCCCHHHHHHHHH------------------------HTCSEEESS----
T ss_pred cccCHHHHHHHHHHHH-HhCCCeEEEeeCCEEeCHHHHHHHHH------------------------cCCeEEecC----
Confidence 3455555666665543 23335777777787775422222221 277777554
Q ss_pred cccchHHHHHHHHhCCCcEEecccC
Q psy17541 612 SRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 612 NKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
|.+.|.+|+++++||.+++--
T Consensus 208 ----~~pea~lAr~~gi~~~~i~~V 228 (266)
T 1qe5_A 208 ----TTLEAIAARHCGLEVLGVSLV 228 (266)
T ss_dssp ----SHHHHHHHHHTTCEEEEEEEE
T ss_pred ----hHHHHHHHHHCCCCEEEEEEE
Confidence 489999999999999987643
No 474
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=25.87 E-value=1.2e+02 Score=30.76 Aligned_cols=55 Identities=15% Similarity=0.035 Sum_probs=36.7
Q ss_pred hccCCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc
Q psy17541 522 KLANDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL 583 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~ 583 (717)
.+..|++||++|.+.+=..++..|+..|- +||+++..+.. +. .+.+.|.+..+-.
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~--~~---~~~~lGa~~~i~~ 217 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGL--RVAAVDIDDAK--LN---LARRLGAEVAVNA 217 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTC--EEEEEESCHHH--HH---HHHHTTCSEEEET
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEeCCHHH--HH---HHHHcCCCEEEeC
Confidence 47789999999987654555556665564 89999886532 23 3455687665543
No 475
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=25.86 E-value=66 Score=30.90 Aligned_cols=30 Identities=20% Similarity=0.183 Sum_probs=19.9
Q ss_pred HhhccCCCeEEEecCch---HHHHHHHHHHHcC
Q psy17541 520 HNKLANDDVILTYGCSS---LVEKILLTAHEKG 549 (717)
Q Consensus 520 ~e~I~dGdvILTyg~SS---tV~~vL~~A~e~G 549 (717)
..++..||+++.+++|. -+..++..|++.|
T Consensus 109 ~~~~~~~Dvvi~iS~SG~t~~~~~~~~~ak~~g 141 (201)
T 3trj_A 109 AALGNEDDILLVITTSGDSENILSAVEEAHDLE 141 (201)
T ss_dssp HHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTT
T ss_pred HhhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCC
Confidence 34578899999987764 4555555565443
No 476
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=25.85 E-value=48 Score=27.62 Aligned_cols=53 Identities=11% Similarity=0.068 Sum_probs=32.3
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCC-CchhHHHHHHHHHhC--C--CcEEEEc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGS-PWYEGKEMLRRLVKH--Q--VDCSYVL 583 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESR-P~~EGr~lA~~L~~~--G--I~vTyI~ 583 (717)
|-.|.+..... .++....+ ..+.++++|-. |...|..+++.|.+. + +++.+++
T Consensus 27 g~~v~~~~~~~---~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s 84 (127)
T 3i42_A 27 GFQADYVMSGT---DALHAMST--RGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVS 84 (127)
T ss_dssp TEEEEEESSHH---HHHHHHHH--SCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEE
T ss_pred CCCEEEECCHH---HHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEE
Confidence 44455544433 33333322 34788888854 788899999999986 3 5555444
No 477
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=25.84 E-value=1e+02 Score=31.58 Aligned_cols=68 Identities=18% Similarity=0.173 Sum_probs=42.3
Q ss_pred CeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc---hH--HHHHhhhccEEEEce
Q psy17541 527 DVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL---SA--VSYIMREVSKVIIGA 601 (717)
Q Consensus 527 dvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D---SA--VsyiM~~VdkVLLGA 601 (717)
.+||..|-+..-..+...|++.| ++|+++|..|..-+..++ +-.|+.+ .. +-.+.+++|.|+.|.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G--~~vv~vd~~~~~~~~~~a--------D~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 71 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAG--MKVVLVDKNPQALIRNYA--------DEFYCFDVIKEPEKLLELSKRVDAVLPVN 71 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCTTCTTTTTS--------SEEEECCTTTCHHHHHHHHTSSSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCCCChhHhhC--------CEEEECCCCcCHHHHHHHhcCCCEEEECC
Confidence 37888987766566777777666 678888988875543322 2223222 22 223345799998887
Q ss_pred eeE
Q psy17541 602 HAL 604 (717)
Q Consensus 602 daV 604 (717)
+.+
T Consensus 72 ~~~ 74 (363)
T 4ffl_A 72 ENL 74 (363)
T ss_dssp CCH
T ss_pred CCh
Confidence 643
No 478
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=25.83 E-value=1.6e+02 Score=32.64 Aligned_cols=112 Identities=13% Similarity=0.126 Sum_probs=67.4
Q ss_pred ccCCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEc-CCCCc-----------hh-HHHHHHHHHhCCCcEEEEc-c---
Q psy17541 523 LANDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIV-DGSPW-----------YE-GKEMLRRLVKHQVDCSYVL-L--- 584 (717)
Q Consensus 523 I~dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVv-ESRP~-----------~E-Gr~lA~~L~~~GI~vTyI~-D--- 584 (717)
+..|.++|+.|-++-+-..|. ...+.|.. +|+++ .-++. .+ ...++.+|...|..++++. |
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~-~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd 326 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAG-HLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD 326 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCC-EEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCC-EEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence 556778888887766544443 33445543 23433 33321 12 2578888999999988874 2
Q ss_pred -hHHHHHhhh------ccEEEEceeeEecCCCe-------------ecccchHHHHHHHHhCC-----CcEEecccC
Q psy17541 585 -SAVSYIMRE------VSKVIIGAHALLSNGAV-------------MSRAGTAQVSLVARAFN-----VPVLAACET 636 (717)
Q Consensus 585 -SAVsyiM~~------VdkVLLGAdaVlaNG~V-------------vNKiGT~~VALaAK~~~-----VPVyV~cEt 636 (717)
.++..++.. +|.||-.| .++.+|.+ .|-.|+..+.-++..+. ..++|++-+
T Consensus 327 ~~~v~~~~~~i~~~g~id~vVh~A-Gv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS 402 (525)
T 3qp9_A 327 AEAAARLLAGVSDAHPLSAVLHLP-PTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSS 402 (525)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECC-CCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEECC-cCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECC
Confidence 356666654 57766655 34444443 25578888887777765 667776544
No 479
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=25.79 E-value=1.9e+02 Score=29.79 Aligned_cols=53 Identities=25% Similarity=0.178 Sum_probs=33.9
Q ss_pred cc-CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 523 LA-NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 523 I~-dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
+. .|++||++|.+.+=..++..|+..| .+|++++..+.. +.++ +.+.|.+..+
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~G--a~Vi~~~~~~~~--~~~~--~~~lGa~~v~ 237 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFG--SKVTVISTSPSK--KEEA--LKNFGADSFL 237 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCGGG--HHHH--HHTSCCSEEE
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHH--HHHH--HHhcCCceEE
Confidence 55 8999999997655455556666666 479988876542 2222 2366876544
No 480
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=25.78 E-value=38 Score=28.95 Aligned_cols=56 Identities=23% Similarity=0.237 Sum_probs=34.7
Q ss_pred CCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCC-CchhHHHHHHHHHhCC--CcEEEEcc
Q psy17541 526 DDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGS-PWYEGKEMLRRLVKHQ--VDCSYVLL 584 (717)
Q Consensus 526 GdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESR-P~~EGr~lA~~L~~~G--I~vTyI~D 584 (717)
|..|.+.....- ++......+..+.++++|.. |...|..+++.|.+.+ +++.+++.
T Consensus 27 g~~v~~~~~~~~---a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~ 85 (143)
T 3jte_A 27 GNEVLTASSSTE---GLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTG 85 (143)
T ss_dssp TCEEEEESSHHH---HHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEEC
T ss_pred CceEEEeCCHHH---HHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEEC
Confidence 455555544433 33333323467888888855 7788999999998753 55555443
No 481
>3k6m_A Succinyl-COA:3-ketoacid-coenzyme A transferase 1, mitochondrial; SCOT, COA transferase, dynamic domain, glycerol, mitochondri transferase; 1.50A {Sus scrofa} PDB: 1m3e_A* 1o9l_A 1ooy_A 2nrc_A 2nrb_A 3oxo_A* 1ooz_A 1ope_A 3dlx_A
Probab=25.68 E-value=49 Score=36.91 Aligned_cols=97 Identities=13% Similarity=0.150 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhhccCCCeEEE-ecCchHHHHHHHHHHHcCCeeEEEEcCC-----CCchhHHHHHHHHHhCCC-cEE---
Q psy17541 511 AGNAICMFFHNKLANDDVILT-YGCSSLVEKILLTAHEKGTKFRVIIVDG-----SPWYEGKEMLRRLVKHQV-DCS--- 580 (717)
Q Consensus 511 A~e~Ia~~A~e~I~dGdvILT-yg~SStV~~vL~~A~e~Gk~FrVIVvES-----RP~~EGr~lA~~L~~~GI-~vT--- 580 (717)
.++.|+..++..|+||++|-. +|-..+|..+|. .++.+ .+.+|+ .|.......-..|...|- .++
T Consensus 262 ~~~~Ia~raA~el~dG~~vnlGIGiP~~v~~~~~----~~~~l-~l~~E~G~~g~~p~~~~~~~d~~~in~Gk~~~t~~~ 336 (481)
T 3k6m_A 262 VRERIIKRAALEFEDGMYANLGIGIPLLASNFIS----PNMTV-HLQSENGILGLGPYPLQNEVDADLINAGKETVTVLP 336 (481)
T ss_dssp CHHHHHHHHGGGCCTTEEEEECTTHHHHHGGGCC----TTSCE-EEEETTTEEEECCCCCGGGCCTTCBCTTSBBCCEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEccCHHHHHHhhhc----cCCcE-EEEECCcEeCCccCCCCCccCcccccCCCceEeccc
Confidence 456789999999999985433 443344444442 34443 233443 444211100112333442 232
Q ss_pred --EEcchHHHHH-hh--hccEEEEceeeEecCCCeec
Q psy17541 581 --YVLLSAVSYI-MR--EVSKVIIGAHALLSNGAVMS 612 (717)
Q Consensus 581 --yI~DSAVsyi-M~--~VdkVLLGAdaVlaNG~VvN 612 (717)
-+.|+.-.|- ++ .+|..|+||==|-.+|.+-|
T Consensus 337 g~~~~~~~~~F~~~~gG~~Dv~ilga~qVD~~Gnvn~ 373 (481)
T 3k6m_A 337 GASYFSSDESFAMIRGGHVNLTMLGAMQVSKYGDLAN 373 (481)
T ss_dssp EEEECCHHHHHHHHHTTCCSEEEECCSEEETTCCEEC
T ss_pred cceecCCHHHeeeecCCCeEEEEechHhccCCCCccc
Confidence 2345554444 44 58999999999999998843
No 482
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=25.68 E-value=2.7e+02 Score=26.27 Aligned_cols=76 Identities=13% Similarity=0.071 Sum_probs=47.3
Q ss_pred CCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEc-c----hHHHHHhh------
Q psy17541 525 NDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVL-L----SAVSYIMR------ 592 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~-D----SAVsyiM~------ 592 (717)
.|.+||+.|-|+-+-..|. ...+.| .+|++++-++......++.+|...|..+.++. | .++..++.
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAG--AKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC--CEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4568888888776655444 444445 46777765523344567777877777776653 3 33445554
Q ss_pred -hccEEEEcee
Q psy17541 593 -EVSKVIIGAH 602 (717)
Q Consensus 593 -~VdkVLLGAd 602 (717)
.+|.||--|-
T Consensus 84 g~id~vi~~Ag 94 (258)
T 3afn_B 84 GGIDVLINNAG 94 (258)
T ss_dssp SSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 6788887664
No 483
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=25.52 E-value=94 Score=29.06 Aligned_cols=65 Identities=17% Similarity=0.214 Sum_probs=43.8
Q ss_pred cCchHHHHHHHHHHH-cC--CeeEEEEcCCCCchhH----HHHHHHHHhCCCcEEEEcchHH-HHHhhhccEEEE
Q psy17541 533 GCSSLVEKILLTAHE-KG--TKFRVIIVDGSPWYEG----KEMLRRLVKHQVDCSYVLLSAV-SYIMREVSKVII 599 (717)
Q Consensus 533 g~SStV~~vL~~A~e-~G--k~FrVIVvESRP~~EG----r~lA~~L~~~GI~vTyI~DSAV-syiM~~VdkVLL 599 (717)
++|...+.+|++... .| ..|.|.=.-+.|+..| ....+.|.++||++. ..--.+ ...+.. |.||.
T Consensus 16 cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~~~G~~~~p~a~~~l~~~Gid~s-~~ar~l~~~~~~~-DlIi~ 88 (163)
T 1u2p_A 16 CRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPTD-HRAAQVGTEHLAA-DLLVA 88 (163)
T ss_dssp SHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCTTTTCCCCHHHHHHHHHTTCCCC-CCCCBCCHHHHTS-SEEEE
T ss_pred hHHHHHHHHHHHHHHHCCCCCcEEEEecccCCCcCCCCCCHHHHHHHHHcCcCCC-ceeeECChhhccC-CEEEE
Confidence 567888888887654 33 3588988888887666 367889999999987 322222 233445 76653
No 484
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=25.45 E-value=1.1e+02 Score=28.85 Aligned_cols=106 Identities=11% Similarity=0.060 Sum_probs=53.9
Q ss_pred CCCeEEEecCchHHHHHHH-HHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcc----hHHHHHhhhccEEEE
Q psy17541 525 NDDVILTYGCSSLVEKILL-TAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLL----SAVSYIMREVSKVII 599 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~-~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~D----SAVsyiM~~VdkVLL 599 (717)
.|.+||+.|-++-+-..|. .+.+.|...+|++++-+|.... .+...++.+ +..| ..+..++.++|.||-
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~-----~~~~~~~~~-~~~D~~d~~~~~~~~~~~d~vi~ 90 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFD-----EEAYKNVNQ-EVVDFEKLDDYASAFQGHDVGFC 90 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCC-----SGGGGGCEE-EECCGGGGGGGGGGGSSCSEEEE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcc-----ccccCCceE-EecCcCCHHHHHHHhcCCCEEEE
Confidence 4678888888776655444 4445565226776654442110 011123322 2223 234444555555554
Q ss_pred ceeeEecCC-----CeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 600 GAHALLSNG-----AVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 600 GAdaVlaNG-----~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
-|-...... .-+|-.|+..++-+++..++.-+|...+
T Consensus 91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS 132 (242)
T 2bka_A 91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS 132 (242)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEcc
Confidence 432110000 0035678888888888888866655444
No 485
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=25.42 E-value=1.8e+02 Score=23.58 Aligned_cols=77 Identities=16% Similarity=0.185 Sum_probs=45.5
Q ss_pred eEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchH--HHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHHh---
Q psy17541 552 FRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSA--VSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA--- 625 (717)
Q Consensus 552 FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSA--VsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~--- 625 (717)
.+|+|+|..|.. ...+...|...|+.|....+.. +..+-. ..|.||+..+. .+ ..-|-..+..+-..
T Consensus 6 ~~ilivdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~~dlvi~d~~~--~~----~~~g~~~~~~l~~~~~~ 78 (127)
T 2gkg_A 6 KKILIVESDTAL-SATLRSALEGRGFTVDETTDGKGSVEQIRRDRPDLVVLAVDL--SA----GQNGYLICGKLKKDDDL 78 (127)
T ss_dssp CEEEEECSCHHH-HHHHHHHHHHHTCEEEEECCHHHHHHHHHHHCCSEEEEESBC--GG----GCBHHHHHHHHHHSTTT
T ss_pred CeEEEEeCCHHH-HHHHHHHHHhcCceEEEecCHHHHHHHHHhcCCCEEEEeCCC--CC----CCCHHHHHHHHhcCccc
Confidence 478888877643 3445666777888887666533 222222 47888887542 20 11243444444443
Q ss_pred CCCcEEecccC
Q psy17541 626 FNVPVLAACET 636 (717)
Q Consensus 626 ~~VPVyV~cEt 636 (717)
.++||+++ ..
T Consensus 79 ~~~~ii~~-~~ 88 (127)
T 2gkg_A 79 KNVPIVII-GN 88 (127)
T ss_dssp TTSCEEEE-EC
T ss_pred cCCCEEEE-ec
Confidence 58999998 44
No 486
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=25.37 E-value=2.3e+02 Score=26.08 Aligned_cols=53 Identities=19% Similarity=0.144 Sum_probs=32.8
Q ss_pred hccCCCeEEEecCchHHH-HHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE
Q psy17541 522 KLANDDVILTYGCSSLVE-KILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY 581 (717)
Q Consensus 522 ~I~dGdvILTyg~SStV~-~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy 581 (717)
.+..|++||++|-++-|- .++..++..| .+|++++.++.. +..+.+.|....+
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G--~~V~~~~~~~~~-----~~~~~~~g~~~~~ 88 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMIG--ARIYTTAGSDAK-----REMLSRLGVEYVG 88 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHHT--CEEEEEESSHHH-----HHHHHTTCCSEEE
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHcC--CEEEEEeCCHHH-----HHHHHHcCCCEEe
Confidence 367899999999655443 3444555556 478888865421 2334456776443
No 487
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=25.31 E-value=1.5e+02 Score=29.55 Aligned_cols=98 Identities=11% Similarity=0.065 Sum_probs=52.9
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHH---HHhh--hccEEEE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVS---YIMR--EVSKVII 599 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVs---yiM~--~VdkVLL 599 (717)
...+++|-|.+..+..++......|. +|++. .|.+.|.. ..+...|+.+..+....-. .+.. +...|++
T Consensus 82 ~~~i~~t~g~~~al~~~~~~l~~~gd--~Vl~~--~p~~~~~~--~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~v~i 155 (360)
T 3hdo_A 82 PSWIIMANGSDEVLNNLIRAFAAEGE--EIGYV--HPSYSYYG--TLAEVQGARVRTFGLTGDFRIAGFPERYEGKVFFL 155 (360)
T ss_dssp GGGEEEESSHHHHHHHHHHHHCCTTC--EEEEE--SSSCTHHH--HHHHHHTCEEEEECBCTTSSBTTCCSSBCSSEEEE
T ss_pred cceEEEcCCHHHHHHHHHHHHhCCCC--EEEEc--CCChHHHH--HHHHHCCCEEEEeeCCCCCCHHHHHhhcCCCEEEE
Confidence 34677777777776666665544443 45554 36666643 3344568888887642211 1111 1233433
Q ss_pred ceeeEecCCCeecccchHHHHHHHHhCCCcEEe
Q psy17541 600 GAHALLSNGAVMSRAGTAQVSLVARAFNVPVLA 632 (717)
Q Consensus 600 GAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV 632 (717)
.+.-...|.++.. -.+.-+|+.+++.|++
T Consensus 156 -~~p~nptG~~~~~---~~l~~l~~~~~~~li~ 184 (360)
T 3hdo_A 156 -TTPNAPLGPSFPL---EYIDELARRCAGMLVL 184 (360)
T ss_dssp -ESSCTTTCCCCCH---HHHHHHHHHBSSEEEE
T ss_pred -eCCCCCCCCCcCH---HHHHHHHHHCCCEEEE
Confidence 2222234555444 3466677888887776
No 488
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=25.30 E-value=1.3e+02 Score=25.45 Aligned_cols=83 Identities=14% Similarity=0.199 Sum_probs=47.5
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHH-h--hhccEEEEceeeEecCCCeecccchHHHHHHHHh-C
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYI-M--REVSKVIIGAHALLSNGAVMSRAGTAQVSLVARA-F 626 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyi-M--~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~-~ 626 (717)
..+|+|+|..|... ..+...|...|+.|....+..-+.- + ...|.||+..+ +.+| ..-|--.+..+-+. .
T Consensus 6 ~~~ilivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~--l~~~---~~~g~~~~~~l~~~~~ 79 (136)
T 3kto_A 6 HPIIYLVDHQKDAR-AALSKLLSPLDVTIQCFASAESFMRQQISDDAIGMIIEAH--LEDK---KDSGIELLETLVKRGF 79 (136)
T ss_dssp -CEEEEECSCHHHH-HHHHHHHTTSSSEEEEESSHHHHTTSCCCTTEEEEEEETT--GGGB---TTHHHHHHHHHHHTTC
T ss_pred CCeEEEEcCCHHHH-HHHHHHHHHCCcEEEEeCCHHHHHHHHhccCCCEEEEeCc--CCCC---CccHHHHHHHHHhCCC
Confidence 46888888876543 3456667778888876655433222 2 24778877543 2221 02344444433333 4
Q ss_pred CCcEEecccCCcc
Q psy17541 627 NVPVLAACETHKF 639 (717)
Q Consensus 627 ~VPVyV~cEtyKF 639 (717)
++||++++.....
T Consensus 80 ~~~ii~~s~~~~~ 92 (136)
T 3kto_A 80 HLPTIVMASSSDI 92 (136)
T ss_dssp CCCEEEEESSCCH
T ss_pred CCCEEEEEcCCCH
Confidence 7999999876543
No 489
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=25.29 E-value=54 Score=32.92 Aligned_cols=108 Identities=17% Similarity=0.131 Sum_probs=52.9
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceee
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAda 603 (717)
.+.+||+.|.+..|-..|.. +.+.| ++|++++-++...-.. +..+.. +-.+.++........+.++|.||--|-.
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~d~vih~A~~ 101 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDG--HEVTVVDNFFTGRKRN-VEHWIG-HENFELINHDVVEPLYIEVDQIYHLASP 101 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSSCCGGG-TGGGTT-CTTEEEEECCTTSCCCCCCSEEEECCSC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCC--CEEEEEeCCCccchhh-hhhhcc-CCceEEEeCccCChhhcCCCEEEECccc
Confidence 35688888888766555544 44455 5677665433211010 111111 1234444321111123345555543321
Q ss_pred EecC---C-----CeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 604 LLSN---G-----AVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 604 VlaN---G-----~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
.... . .-+|-.||..+.-+|+..++.|+.+.-.
T Consensus 102 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 142 (343)
T 2b69_A 102 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTS 142 (343)
T ss_dssp CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEECcH
Confidence 1100 0 0246678889998898888877765543
No 490
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=25.29 E-value=1.1e+02 Score=32.65 Aligned_cols=68 Identities=16% Similarity=0.288 Sum_probs=42.5
Q ss_pred CCCeEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHH-hCCC--cEEEEcchHHHHHhh-hccEEE
Q psy17541 525 NDDVILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLV-KHQV--DCSYVLLSAVSYIMR-EVSKVI 598 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~-~~GI--~vTyI~DSAVsyiM~-~VdkVL 598 (717)
.|.+||=+|+++-++.++ |++.|-+ +||.+|..|.. ..|+++. ..|+ .+++|.-.+--.-++ ++|.||
T Consensus 83 ~~k~VLDvG~GtGiLs~~--Aa~aGA~-~V~ave~s~~~---~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIF--CAQAGAR-RVYAVEASAIW---QQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHHH--HHHTTCS-EEEEEECSTTH---HHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEE
T ss_pred CCCEEEEeCCCccHHHHH--HHHhCCC-EEEEEeChHHH---HHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEE
Confidence 578999999998666543 3445644 89999988754 3455544 4555 477776443222233 466654
No 491
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=25.25 E-value=1.7e+02 Score=24.46 Aligned_cols=83 Identities=13% Similarity=0.096 Sum_probs=48.5
Q ss_pred CCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE-Ecch--HHHHHhh-hccEEEEceeeEecCCCeecccchHHHHHHHH
Q psy17541 549 GTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY-VLLS--AVSYIMR-EVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR 624 (717)
Q Consensus 549 Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy-I~DS--AVsyiM~-~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK 624 (717)
....+|+|+|..|... ..+...|...|+.+.. ..+. ++.++-. ..|.||+..+. .+| .-|--.+..+-.
T Consensus 7 ~~~~~iLivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~--~~~----~~g~~~~~~l~~ 79 (140)
T 3cg0_A 7 DDLPGVLIVEDGRLAA-ATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIML--CGA----LDGVETAARLAA 79 (140)
T ss_dssp -CCCEEEEECCBHHHH-HHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSC--CSS----SCHHHHHHHHHH
T ss_pred CCCceEEEEECCHHHH-HHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCC--CCC----CCHHHHHHHHHh
Confidence 3557888888776543 3455667777888875 4432 3333322 47899887543 111 123333444433
Q ss_pred hCCCcEEecccCCc
Q psy17541 625 AFNVPVLAACETHK 638 (717)
Q Consensus 625 ~~~VPVyV~cEtyK 638 (717)
..++||++++....
T Consensus 80 ~~~~~ii~ls~~~~ 93 (140)
T 3cg0_A 80 GCNLPIIFITSSQD 93 (140)
T ss_dssp HSCCCEEEEECCCC
T ss_pred CCCCCEEEEecCCC
Confidence 47899999887543
No 492
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=25.23 E-value=2.7e+02 Score=22.88 Aligned_cols=81 Identities=10% Similarity=0.117 Sum_probs=47.6
Q ss_pred eeEEEEcCCCCchhHHHHHHHHHhCCCcEEEEcch--HHHHHhh--hccEEEEceeeEecCCCeecccchHHHHHHHH-h
Q psy17541 551 KFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYVLLS--AVSYIMR--EVSKVIIGAHALLSNGAVMSRAGTAQVSLVAR-A 625 (717)
Q Consensus 551 ~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI~DS--AVsyiM~--~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK-~ 625 (717)
..+|+|+|..|... ..+...|...|+.|..+.+. ++..+-. ..|.||+..+- .+| .-|--.+..+-. .
T Consensus 5 ~~~ilivdd~~~~~-~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l--~~~----~~g~~~~~~l~~~~ 77 (132)
T 2rdm_A 5 AVTILLADDEAILL-LDFESTLTDAGFLVTAVSSGAKAIEMLKSGAAIDGVVTDIRF--CQP----PDGWQVARVAREID 77 (132)
T ss_dssp SCEEEEECSSHHHH-HHHHHHHHHTTCEEEEESSHHHHHHHHHTTCCCCEEEEESCC--SSS----SCHHHHHHHHHHHC
T ss_pred CceEEEEcCcHHHH-HHHHHHHHHcCCEEEEECCHHHHHHHHHcCCCCCEEEEeeeC--CCC----CCHHHHHHHHHhcC
Confidence 46788888776442 34566677788888776543 2333333 47888887542 221 123333333333 3
Q ss_pred CCCcEEecccCCc
Q psy17541 626 FNVPVLAACETHK 638 (717)
Q Consensus 626 ~~VPVyV~cEtyK 638 (717)
.++||++++....
T Consensus 78 ~~~~ii~~s~~~~ 90 (132)
T 2rdm_A 78 PNMPIVYISGHAA 90 (132)
T ss_dssp TTCCEEEEESSCC
T ss_pred CCCCEEEEeCCcc
Confidence 4799999876543
No 493
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=25.15 E-value=2.5e+02 Score=26.66 Aligned_cols=56 Identities=18% Similarity=0.162 Sum_probs=40.2
Q ss_pred CCCeEEEecCchHHHHHHHH-HHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEEE
Q psy17541 525 NDDVILTYGCSSLVEKILLT-AHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSYV 582 (717)
Q Consensus 525 dGdvILTyg~SStV~~vL~~-A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTyI 582 (717)
.|.+||+.|-|+-+-..|.. ..+.| .+|+++..|.......++..|...|-.+.++
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDG--ALVAIHYGNRKEEAEETVYEIQSNGGSAFSI 62 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHHHHHHhcCCceEEE
Confidence 46788888887766554443 34445 5788877777777788888998888777765
No 494
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=25.15 E-value=89 Score=27.65 Aligned_cols=52 Identities=12% Similarity=0.125 Sum_probs=27.9
Q ss_pred eEEEEcCCCCchhHHHHH----HHHHhCCCcEEE--EcchHHHHHhhhccEEEEceee
Q psy17541 552 FRVIIVDGSPWYEGKEML----RRLVKHQVDCSY--VLLSAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 552 FrVIVvESRP~~EGr~lA----~~L~~~GI~vTy--I~DSAVsyiM~~VdkVLLGAda 603 (717)
.+|+++-+.=......++ +.+.+.||++.+ .....+...+.++|.||++.+-
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~~~~~~~DlIist~~l 79 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARV 79 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTTTSTTSCSEEEESSCC
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHhhccCCCCEEEECCcc
Confidence 345544443333333333 345567887543 3334443345679999988754
No 495
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=25.14 E-value=86 Score=32.08 Aligned_cols=57 Identities=18% Similarity=0.244 Sum_probs=40.4
Q ss_pred eEEEecC---chHHHHHHHHHHHcCCeeEEEEcCCCCchhHHHHHHHHHhCCCcEEE-EcchH
Q psy17541 528 VILTYGC---SSLVEKILLTAHEKGTKFRVIIVDGSPWYEGKEMLRRLVKHQVDCSY-VLLSA 586 (717)
Q Consensus 528 vILTyg~---SStV~~vL~~A~e~Gk~FrVIVvESRP~~EGr~lA~~L~~~GI~vTy-I~DSA 586 (717)
++|||-+ ..-+++|+..+.+.|.. -|||.|- |..|...+...+.++||+..+ +..++
T Consensus 92 vlm~Y~N~i~~~G~e~F~~~~~~aGvd-G~IipDL-P~eE~~~~~~~~~~~Gl~~I~lvaP~t 152 (252)
T 3tha_A 92 VFMVYYNLIFSYGLEKFVKKAKSLGIC-ALIVPEL-SFEESDDLIKECERYNIALITLVSVTT 152 (252)
T ss_dssp EEECCHHHHHHHCHHHHHHHHHHTTEE-EEECTTC-CGGGCHHHHHHHHHTTCEECEEEETTS
T ss_pred EEEeccCHHHHhhHHHHHHHHHHcCCC-EEEeCCC-CHHHHHHHHHHHHHcCCeEEEEeCCCC
Confidence 4555533 22357899999887754 6788886 777888899999999997554 54443
No 496
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=25.09 E-value=1.1e+02 Score=30.93 Aligned_cols=44 Identities=14% Similarity=0.221 Sum_probs=26.8
Q ss_pred chhHHHHHHHHHhCCCcEEEEcch------HHHHHhhhccEEEEceeeEe
Q psy17541 562 WYEGKEMLRRLVKHQVDCSYVLLS------AVSYIMREVSKVIIGAHALL 605 (717)
Q Consensus 562 ~~EGr~lA~~L~~~GI~vTyI~DS------AVsyiM~~VdkVLLGAdaVl 605 (717)
..+...+++.|.+.||++.-|+.+ ++..+-.++.-+++||..|+
T Consensus 45 ~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVl 94 (232)
T 4e38_A 45 AEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTIL 94 (232)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcC
Confidence 456777888888888777666532 23333334545677775554
No 497
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=25.08 E-value=41 Score=33.86 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=26.6
Q ss_pred HHhhhccEEEEceeeEecCCCeecccchHHHHHHHHhCCCcEEecccC
Q psy17541 589 YIMREVSKVIIGAHALLSNGAVMSRAGTAQVSLVARAFNVPVLAACET 636 (717)
Q Consensus 589 yiM~~VdkVLLGAdaVlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEt 636 (717)
.+..++|.+++..|.. +++. ...+..++...++|||...+.
T Consensus 189 ~l~~~~d~i~~~~d~~-----~~~~--~~~i~~~~~~~~iPv~~~~~~ 229 (302)
T 3lkv_A 189 AIAEKSDVIYALIDNT-----VASA--IEGMIVAANQAKTPVFGAATS 229 (302)
T ss_dssp HHHTTCSEEEECSCHH-----HHHT--HHHHHHHHHHTTCCEEESSHH
T ss_pred hccCCeeEEEEeCCcc-----hhhH--HHHHHHHHhhcCCceeecccc
Confidence 3345788888765543 3332 344567889999999976543
No 498
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=25.08 E-value=1.9e+02 Score=29.25 Aligned_cols=89 Identities=16% Similarity=0.163 Sum_probs=56.0
Q ss_pred eEEEecCchHHHHHHHHHHHcCCeeEEEEcCCCCch-h---HHHHHHHHHhCCCcEEEEcchHHHHHhhhccEEEEceee
Q psy17541 528 VILTYGCSSLVEKILLTAHEKGTKFRVIIVDGSPWY-E---GKEMLRRLVKHQVDCSYVLLSAVSYIMREVSKVIIGAHA 603 (717)
Q Consensus 528 vILTyg~SStV~~vL~~A~e~Gk~FrVIVvESRP~~-E---Gr~lA~~L~~~GI~vTyI~DSAVsyiM~~VdkVLLGAda 603 (717)
++|+.|... +...|+.|...|-. +||++++-+.+ + -..+++.|.+ .+.. ...|.||+|+.+
T Consensus 59 ~av~~G~~~-a~~~lr~ala~GaD-~vi~v~~d~~~~~~~~~~~~a~~La~-----------~i~~--~~~dlVl~G~~s 123 (252)
T 1efp_B 59 IAVSIGVKQ-AAETLRTALAMGAD-RAILVVAADDVQQDIEPLAVAKILAA-----------VARA--EGTELIIAGKQA 123 (252)
T ss_dssp EEEEEESGG-GHHHHHHHHHHTCS-EEEEEECCSSTTCCCCHHHHHHHHHH-----------HHHH--HTCSEEEEESCC
T ss_pred EEEEeCChh-HHHHHHHHHhcCCC-EEEEEecChhhcccCCHHHHHHHHHH-----------HHHh--cCCCEEEEcCCc
Confidence 577888644 36677777666655 67777733333 3 3445555542 1111 247999999998
Q ss_pred EecCCCeecccchHHHHHHHHhCCCcEEecccCCc
Q psy17541 604 LLSNGAVMSRAGTAQVSLVARAFNVPVLAACETHK 638 (717)
Q Consensus 604 VlaNG~VvNKiGT~~VALaAK~~~VPVyV~cEtyK 638 (717)
+-.+|. ....++|...++|.+--|-...
T Consensus 124 ~d~~~~-------~v~p~lA~~L~~~~vt~v~~l~ 151 (252)
T 1efp_B 124 IDNDMN-------ATGQMLAAILGWAQATFASKVE 151 (252)
T ss_dssp TTTCCC-------CHHHHHHHHHTCEEEEEEEEEE
T ss_pred cCCchh-------hHHHHHHHHhCCCccccEEEEE
Confidence 855543 3356889999999996654433
No 499
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=25.08 E-value=94 Score=31.43 Aligned_cols=21 Identities=14% Similarity=0.294 Sum_probs=14.5
Q ss_pred HHHHHHHHhCCCcEEecccCC
Q psy17541 617 AQVSLVARAFNVPVLAACETH 637 (717)
Q Consensus 617 ~~VALaAK~~~VPVyV~cEty 637 (717)
+...++++..++|+++..-..
T Consensus 135 ~~~~~~~~~~~~~~v~~~h~~ 155 (439)
T 3fro_A 135 FAGALIKKYFKIPAVFTIHRL 155 (439)
T ss_dssp HHHHHHHHHHCCCEEEEESCC
T ss_pred hhHHHHhhccCCCEEEEeccc
Confidence 344566688899998866544
No 500
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=25.08 E-value=2.2e+02 Score=29.84 Aligned_cols=36 Identities=8% Similarity=0.081 Sum_probs=22.0
Q ss_pred ecCCCeecccchHHHHHHHH-hC----CCcEEecccCCccc
Q psy17541 605 LSNGAVMSRAGTAQVSLVAR-AF----NVPVLAACETHKFC 640 (717)
Q Consensus 605 laNG~VvNKiGT~~VALaAK-~~----~VPVyV~cEtyKFs 640 (717)
++++....-.|++..+.++. .. .+||..++-...|.
T Consensus 274 vEe~~~~Gg~g~~v~~~l~~~~~~~~l~~~v~~ig~~d~~~ 314 (341)
T 2ozl_B 274 VEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPM 314 (341)
T ss_dssp ECSSCSTTCHHHHHHHHHHHSTTGGGCSSCCEEECCCSSCC
T ss_pred EecCcccCcHHHHHHHHHHhhhcccccCCCEEEEecCCcCC
Confidence 34554444467777777766 42 67888776544554
Done!