BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17544
(266 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9PTY0|ATPB_CYPCA ATP synthase subunit beta, mitochondrial OS=Cyprinus carpio
GN=atp5b PE=2 SV=1
Length = 518
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/263 (76%), Positives = 220/263 (83%), Gaps = 5/263 (1%)
Query: 1 MLGAISRATAGALKAVKPTLNP-ALLQGEASKAVAGFTINKHYAAKAAPKGKGNGRVVAV 59
MLGA+ R GAL+A++P + P L G A A + Y A AA +GR+VAV
Sbjct: 1 MLGAVGRCCTGALQALRPGVTPLKALNG----APAALFSRRDYVAPAAAAAAASGRIVAV 56
Query: 60 IGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQVVA 119
IGAVVDVQFD DLPPILNALEV GR RLVLEVAQHLGENTVRTIAMDGTEGLVRGQ V
Sbjct: 57 IGAVVDVQFDEDLPPILNALEVAGRDTRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVL 116
Query: 120 DSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQEILVTG 179
D+G PI+IPVG ETLGRI+NVIGEPIDERGPI T ++A IHA+APEF +MSVEQEILVTG
Sbjct: 117 DTGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQTAPIHAEAPEFTDMSVEQEILVTG 176
Query: 180 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDL 239
IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDL
Sbjct: 177 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDL 236
Query: 240 YHEMIESGVISLKDKSSKVNFLF 262
YHEMIESGVI+LKD +SKV ++
Sbjct: 237 YHEMIESGVINLKDTTSKVALVY 259
>sp|Q25117|ATPB_HEMPU ATP synthase subunit beta, mitochondrial OS=Hemicentrotus
pulcherrimus PE=2 SV=1
Length = 523
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/264 (73%), Positives = 220/264 (83%), Gaps = 2/264 (0%)
Query: 1 MLGAISRATAGALKAVKPTLNPALLQGEASKAVAGFTINKH-YAAKAAPKGKG-NGRVVA 58
M +++ + A++A K + +L Q + V T +K YAA+A +G++VA
Sbjct: 1 MFSRVAKTSFSAVRAAKSQFSHSLSQQTSKTWVPAATCSKRSYAAEAKTSAAPVSGQIVA 60
Query: 59 VIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQVV 118
VIGAVVDVQF+ DLPPILNALEV+GR+ RLVLEVAQHLGENTVRTIAMDGTEGL+RGQ
Sbjct: 61 VIGAVVDVQFEDDLPPILNALEVQGRTSRLVLEVAQHLGENTVRTIAMDGTEGLIRGQKC 120
Query: 119 ADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQEILVT 178
D+G+PI IPVG ETLGRIINVIGEPIDERGPI TD+ +AIHA+APEFVEMSV QEILVT
Sbjct: 121 VDTGSPISIPVGPETLGRIINVIGEPIDERGPIGTDRRSAIHAEAPEFVEMSVNQEILVT 180
Query: 179 GIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGND 238
GIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGND
Sbjct: 181 GIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGND 240
Query: 239 LYHEMIESGVISLKDKSSKVNFLF 262
LYHEMIE GVISLKD +SKV ++
Sbjct: 241 LYHEMIEGGVISLKDDTSKVALVY 264
>sp|Q05825|ATPB_DROME ATP synthase subunit beta, mitochondrial OS=Drosophila melanogaster
GN=ATPsyn-beta PE=2 SV=3
Length = 505
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/210 (90%), Positives = 202/210 (96%)
Query: 53 NGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
NG++VAVIGAVVDVQFD +LPPILNALEV+ RSPRLVLEVAQHLGENTVRTIAMDGTEGL
Sbjct: 37 NGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 96
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRGQ V D+G PI+IPVGAETLGRIINVIGEPIDERGPIDTDK+AAIHA+APEFV+MSVE
Sbjct: 97 VRGQKVLDTGYPIRIPVGAETLGRIINVIGEPIDERGPIDTDKTAAIHAEAPEFVQMSVE 156
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER
Sbjct: 157 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 216
Query: 233 TREGNDLYHEMIESGVISLKDKSSKVNFLF 262
TREGNDLY+EMIE GVISLKDK+SKV ++
Sbjct: 217 TREGNDLYNEMIEGGVISLKDKTSKVALVY 246
>sp|P06576|ATPB_HUMAN ATP synthase subunit beta, mitochondrial OS=Homo sapiens GN=ATP5B
PE=1 SV=3
Length = 529
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/272 (75%), Positives = 223/272 (81%), Gaps = 13/272 (4%)
Query: 1 MLGAISRATA----GALKAVKPT--LNPA-LLQGEASKAVAGFTINKHYAAKAAPK---G 50
MLG + R A GAL+ + P+ L PA LL A AV + YAA+ +P G
Sbjct: 1 MLGFVGRVAAAPASGALRRLTPSASLPPAQLLLRAAPTAVHPV---RDYAAQTSPSPKAG 57
Query: 51 KGNGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTE 110
GR+VAVIGAVVDVQFD LPPILNALEV+GR RLVLEVAQHLGE+TVRTIAMDGTE
Sbjct: 58 AATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTE 117
Query: 111 GLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMS 170
GLVRGQ V DSG PIKIPVG ETLGRI+NVIGEPIDERGPI T + A IHA+APEF+EMS
Sbjct: 118 GLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMS 177
Query: 171 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 230
VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG
Sbjct: 178 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 237
Query: 231 ERTREGNDLYHEMIESGVISLKDKSSKVNFLF 262
ERTREGNDLYHEMIESGVI+LKD +SKV ++
Sbjct: 238 ERTREGNDLYHEMIESGVINLKDATSKVALVY 269
>sp|P00829|ATPB_BOVIN ATP synthase subunit beta, mitochondrial OS=Bos taurus GN=ATP5B
PE=1 SV=2
Length = 528
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/269 (75%), Positives = 220/269 (81%), Gaps = 7/269 (2%)
Query: 1 MLGAISRATA----GALKAVKPTLNPALLQGEASKAVAGFTINKHYAAKAAPK---GKGN 53
MLG + R A GAL+ + P+ Q A A + YAA+A+P G
Sbjct: 1 MLGLVGRVVAASASGALRGLSPSAPLPQAQLLLRAAPAALQPARDYAAQASPSPKAGATT 60
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
GR+VAVIGAVVDVQFD LPPILNALEV+GR RLVLEVAQHLGE+TVRTIAMDGTEGLV
Sbjct: 61 GRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLV 120
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RGQ V DSG PI+IPVG ETLGRI+NVIGEPIDERGPI T + AAIHA+APEFVEMSVEQ
Sbjct: 121 RGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSVEQ 180
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT
Sbjct: 181 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 240
Query: 234 REGNDLYHEMIESGVISLKDKSSKVNFLF 262
REGNDLYHEMIESGVI+LKD +SKV ++
Sbjct: 241 REGNDLYHEMIESGVINLKDATSKVALVY 269
>sp|P10719|ATPB_RAT ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus
GN=Atp5b PE=1 SV=2
Length = 529
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/268 (75%), Positives = 224/268 (83%), Gaps = 8/268 (2%)
Query: 1 MLGAISRATA-GALKAVKPTLNPALLQGEA--SKAVAGFTINKHYAAK--AAPK-GKGNG 54
++G ++ A+A GAL+ + P AL Q A AG + YAA+ AAPK G G
Sbjct: 4 LVGRVASASASGALRGLNPL--AALPQAHLLLRTAPAGVHPARDYAAQSSAAPKAGTATG 61
Query: 55 RVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVR 114
++VAVIGAVVDVQFD LPPILNALEV+GR RLVLEVAQHLGE+TVRTIAMDGTEGLVR
Sbjct: 62 QIVAVIGAVVDVQFDEGLPPILNALEVQGRESRLVLEVAQHLGESTVRTIAMDGTEGLVR 121
Query: 115 GQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQE 174
GQ V DSG PIKIPVG ETLGRI+NVIGEPIDERGPI T + A IHA+APEF+EMSVEQE
Sbjct: 122 GQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQE 181
Query: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR
Sbjct: 182 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 241
Query: 235 EGNDLYHEMIESGVISLKDKSSKVNFLF 262
EGNDLYHEMIESGVI+LKD +SKV ++
Sbjct: 242 EGNDLYHEMIESGVINLKDATSKVALVY 269
>sp|P56480|ATPB_MOUSE ATP synthase subunit beta, mitochondrial OS=Mus musculus GN=Atp5b
PE=1 SV=2
Length = 529
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/266 (74%), Positives = 221/266 (83%), Gaps = 4/266 (1%)
Query: 1 MLGAISRATA-GALKAVKPTLNPALLQGEASKAVAGFTINKHYAAKAAPK---GKGNGRV 56
++G ++ A+A GAL+ + P+ Q A AG + YAA+A+ G GR+
Sbjct: 4 LVGRVASASASGALRGLSPSAALPQAQLLLRAAPAGVHPARDYAAQASAAPKAGTATGRI 63
Query: 57 VAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQ 116
VAVIGAVVDVQFD LPPILNALEV+GR RLVLEVAQHLGE+TVRTIAMDGTEGLVRGQ
Sbjct: 64 VAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTEGLVRGQ 123
Query: 117 VVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQEIL 176
V DSG PIKIPVG ETLGRI+NVIGEPIDERGPI T + A IHA+APEF+EMSVEQEIL
Sbjct: 124 KVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEIL 183
Query: 177 VTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 236
VTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG
Sbjct: 184 VTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREG 243
Query: 237 NDLYHEMIESGVISLKDKSSKVNFLF 262
NDLYHEMIESGVI+LKD +SKV ++
Sbjct: 244 NDLYHEMIESGVINLKDATSKVALVY 269
>sp|Q5ZLC5|ATPB_CHICK ATP synthase subunit beta, mitochondrial OS=Gallus gallus GN=ATP5B
PE=1 SV=1
Length = 533
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/210 (87%), Positives = 195/210 (92%)
Query: 53 NGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
GR+VAVIGAVVDVQFD LPPILNALEV+GR RLVLEVAQHLGENTVRTIAMDGTEGL
Sbjct: 65 TGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGENTVRTIAMDGTEGL 124
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRGQ V DSG PI+IPVG ETLGRI+NVIGEPIDERGPI T + AAIHA+APEFVEMSVE
Sbjct: 125 VRGQKVLDSGAPIRIPVGPETLGRIMNVIGEPIDERGPITTKQFAAIHAEAPEFVEMSVE 184
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
Q+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER
Sbjct: 185 QKILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 244
Query: 233 TREGNDLYHEMIESGVISLKDKSSKVNFLF 262
TREGNDLYHEMIESGVI+LKD +SKV ++
Sbjct: 245 TREGNDLYHEMIESGVINLKDATSKVALVY 274
>sp|P46561|ATPB_CAEEL ATP synthase subunit beta, mitochondrial OS=Caenorhabditis elegans
GN=atp-2 PE=1 SV=2
Length = 538
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/216 (83%), Positives = 196/216 (90%)
Query: 47 APKGKGNGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAM 106
A +GR+VAVIGAVVDVQFD +LPPILN LEV GRSPRL+LEV+QHLG+N VR IAM
Sbjct: 63 ATAANASGRIVAVIGAVVDVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAM 122
Query: 107 DGTEGLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEF 166
DGTEGLVRGQ VAD+G+PIKIPVG ETLGRI+NVIGEPIDERGPI + AAIHA+APEF
Sbjct: 123 DGTEGLVRGQPVADTGDPIKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEF 182
Query: 167 VEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVF 226
VEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVF
Sbjct: 183 VEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVF 242
Query: 227 AGVGERTREGNDLYHEMIESGVISLKDKSSKVNFLF 262
AGVGERTREGNDLYHEMIE GVI LK K+SKV+ ++
Sbjct: 243 AGVGERTREGNDLYHEMIEGGVIDLKGKNSKVSLVY 278
>sp|Q24751|ATPB_DROVI ATP synthase subunit beta, mitochondrial (Fragment) OS=Drosophila
virilis GN=ATPsyn-beta PE=3 SV=1
Length = 228
Score = 342 bits (876), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/192 (88%), Positives = 184/192 (95%)
Query: 53 NGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
NG++VAVIGAVVDVQFD +LPPILNALEV+ RSPRLVLEVAQHLGENTVRTIAMDGTEGL
Sbjct: 37 NGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGL 96
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRGQ V D+G+PI+IPVGAETLGRI+NVIGEPIDERGPI + K++ IHA+APEFV+MSVE
Sbjct: 97 VRGQKVLDTGSPIRIPVGAETLGRIMNVIGEPIDERGPIPSAKTSPIHAEAPEFVDMSVE 156
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
QEILVTGIKVVDLLAPY KGGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGER
Sbjct: 157 QEILVTGIKVVDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 216
Query: 233 TREGNDLYHEMI 244
TREGNDLY+EMI
Sbjct: 217 TREGNDLYNEMI 228
>sp|Q8UC76|ATPB_AGRT5 ATP synthase subunit beta OS=Agrobacterium tumefaciens (strain C58
/ ATCC 33970) GN=atpD PE=3 SV=1
Length = 484
Score = 320 bits (819), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 166/213 (77%), Positives = 177/213 (83%), Gaps = 5/213 (2%)
Query: 44 AKAAPKGK-----GNGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGE 98
AKAA K G G+V VIGAVVDV F+ +LPPILNALE + RLVLEVAQHLGE
Sbjct: 2 AKAATPKKTAAVNGAGKVTQVIGAVVDVAFEGELPPILNALETQNNGNRLVLEVAQHLGE 61
Query: 99 NTVRTIAMDGTEGLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAA 158
N VRTIAMD TEGLVRGQ VAD+G PI++PVG ETLGRI+NVIGEP+DE GPI T K A
Sbjct: 62 NVVRTIAMDSTEGLVRGQSVADTGAPIEVPVGLETLGRIMNVIGEPVDEAGPIVTAKKRA 121
Query: 159 IHADAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAK 218
IH DAP +VE S E +ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAK
Sbjct: 122 IHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAK 181
Query: 219 AHGGYSVFAGVGERTREGNDLYHEMIESGVISL 251
AHGGYSVFAGVGERTREGNDLYHEMIES V L
Sbjct: 182 AHGGYSVFAGVGERTREGNDLYHEMIESNVNKL 214
>sp|P17614|ATPBM_NICPL ATP synthase subunit beta, mitochondrial OS=Nicotiana
plumbaginifolia GN=ATPB PE=1 SV=1
Length = 560
Score = 318 bits (815), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 172/255 (67%), Positives = 191/255 (74%), Gaps = 13/255 (5%)
Query: 4 AISRATAGALKAVKPTLNPALLQGEASKAVAGFTINKHYAAKAAPKGKGN-GRVVAVIGA 62
A+ AT+ A A +P+ P + K FT G G+ G+V VIGA
Sbjct: 51 AVQYATSAAAPASQPSTPPKSGSEPSGKITDEFT------------GAGSIGKVCQVIGA 98
Query: 63 VVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQVVADSG 122
VVDV+FD LPPIL ALEV RLVLEVAQHLGEN VRTIAMDGTEGLVRGQ V ++G
Sbjct: 99 VVDVRFDEGLPPILTALEVLDNQIRLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTG 158
Query: 123 NPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQEILVTGIKV 182
+PI +PVG TLGRIINVIGE IDERGPI TD IH +AP FVE + EQ+ILVTGIKV
Sbjct: 159 SPITVPVGRATLGRIINVIGEAIDERGPITTDHFLPIHREAPAFVEQATEQQILVTGIKV 218
Query: 183 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHE 242
VDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGERTREGNDLY E
Sbjct: 219 VDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYRE 278
Query: 243 MIESGVISLKDKSSK 257
MIESGVI L +K S+
Sbjct: 279 MIESGVIKLGEKQSE 293
>sp|P23704|ATPB_NEUCR ATP synthase subunit beta, mitochondrial OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=atp-2 PE=2 SV=1
Length = 519
Score = 317 bits (811), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 161/218 (73%), Positives = 177/218 (81%), Gaps = 2/218 (0%)
Query: 46 AAPKGKGNGRVVAVIGAVVDVQFDHD-LPPILNALEVEGRSPRLVLEVAQHLGENTVRTI 104
A+ G G+G++ VIGAVVDV+FD D LPPILNALE + +LVLEV+QHLGEN VR I
Sbjct: 41 ASSAGVGDGKIYQVIGAVVDVKFDTDKLPPILNALETQNNGQKLVLEVSQHLGENVVRCI 100
Query: 105 AMDGTEGLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAP 164
AMDGTEGLVRG +D+G PI IPVG TLGRIINV G+PIDERGPI TDK IHA+AP
Sbjct: 101 AMDGTEGLVRGAKASDTGAPITIPVGPATLGRIINVTGDPIDERGPIKTDKFRPIHAEAP 160
Query: 165 EFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYS 224
EFVE S EILVTGIKVVDLLAPYA+GGKIGLFGGAGVGKTV I ELINN+AKAHGGYS
Sbjct: 161 EFVEQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYS 220
Query: 225 VFAGVGERTREGNDLYHEMIESGVISLKDKSSKVNFLF 262
VF GVGERTREGNDLYHEM E+ VI L D SKV +F
Sbjct: 221 VFTGVGERTREGNDLYHEMQETSVIQL-DGDSKVALVF 257
>sp|A6WXX1|ATPB_OCHA4 ATP synthase subunit beta OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=atpD PE=3 SV=1
Length = 517
Score = 316 bits (810), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/210 (78%), Positives = 174/210 (82%), Gaps = 1/210 (0%)
Query: 43 AAKAAPKGKGNGRVVAVIGAVVDVQF-DHDLPPILNALEVEGRSPRLVLEVAQHLGENTV 101
AA A K G++ VIGAVVDVQF D LP ILNALE + RLVLEVAQHLGENTV
Sbjct: 38 AAPKAAKTGAVGKITQVIGAVVDVQFEDGQLPLILNALETDNLGSRLVLEVAQHLGENTV 97
Query: 102 RTIAMDGTEGLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHA 161
RTIAMD TEGLVRG V D+GNPI +PVG ETLGRI+NVIGEP+DE GPI T AIH
Sbjct: 98 RTIAMDSTEGLVRGHEVRDTGNPIMVPVGEETLGRIMNVIGEPVDEAGPIKTTARRAIHQ 157
Query: 162 DAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHG 221
+APE++E S E EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHG
Sbjct: 158 EAPEYIEQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHG 217
Query: 222 GYSVFAGVGERTREGNDLYHEMIESGVISL 251
GYSVFAGVGERTREGNDLYHEMIESGV L
Sbjct: 218 GYSVFAGVGERTREGNDLYHEMIESGVNKL 247
>sp|P19023|ATPBM_MAIZE ATP synthase subunit beta, mitochondrial OS=Zea mays GN=ATPB PE=2
SV=1
Length = 553
Score = 314 bits (805), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/204 (77%), Positives = 174/204 (85%)
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
G+V VIGAVVDV+FD LPPIL ALEV + RLVLEVAQHLGEN VRTIAMDGTEGLV
Sbjct: 83 GQVCQVIGAVVDVRFDEGLPPILTALEVLDNNIRLVLEVAQHLGENMVRTIAMDGTEGLV 142
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RGQ V ++G+PI +PVG TLGRIINVIGEPIDE+G I T+ IH +AP FVE + EQ
Sbjct: 143 RGQRVLNTGSPITVPVGRATLGRIINVIGEPIDEKGDIKTNHFLPIHREAPAFVEQATEQ 202
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGERT
Sbjct: 203 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 262
Query: 234 REGNDLYHEMIESGVISLKDKSSK 257
REGNDLY EMIESGVI L DK S+
Sbjct: 263 REGNDLYREMIESGVIKLDDKQSE 286
>sp|Q5LNP1|ATPB_RUEPO ATP synthase subunit beta OS=Ruegeria pomeroyi (strain ATCC 700808
/ DSM 15171 / DSS-3) GN=atpD PE=3 SV=1
Length = 474
Score = 313 bits (801), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/210 (73%), Positives = 175/210 (83%), Gaps = 1/210 (0%)
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
G+V +IGAVVDVQFD LP ILNALE E RLVLEVAQHLGENTVRTIAMD TEGLV
Sbjct: 6 GKVTQIIGAVVDVQFDDALPEILNALETENNGKRLVLEVAQHLGENTVRTIAMDATEGLV 65
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RG VV D+G PI +PVGA TLGRI+NVIGEP+DE+GP++ ++ AIH AP F E S
Sbjct: 66 RGAVVTDTGGPISVPVGAATLGRILNVIGEPVDEKGPVNATETRAIHQPAPSFDEQSTSS 125
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
+ILVTGIKV+DLLAPY+KGGKIGLFGGAGVGKTVLIMELINN+AK H GYSVFAGVGERT
Sbjct: 126 DILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERT 185
Query: 234 REGNDLYHEMIESGVISLKD-KSSKVNFLF 262
REGNDLYHEMIES VI L++ + S+V ++
Sbjct: 186 REGNDLYHEMIESNVIKLENLEESQVALVY 215
>sp|C3M9S1|ATPB_RHISN ATP synthase subunit beta OS=Rhizobium sp. (strain NGR234) GN=atpD
PE=3 SV=1
Length = 505
Score = 312 bits (800), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/196 (80%), Positives = 168/196 (85%), Gaps = 1/196 (0%)
Query: 54 GRVVAVIGAVVDVQFDH-DLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
GRV VIGAVVDV F+ LP ILNALE + + RLVLEVAQHLGEN VRTIAMD TEGL
Sbjct: 37 GRVTQVIGAVVDVAFEEGQLPQILNALETDNKGNRLVLEVAQHLGENAVRTIAMDSTEGL 96
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRGQ V D+G PI +PVG ETLGRI+NVIGEP+DE GP++T AIH DAP +VE S E
Sbjct: 97 VRGQSVTDTGGPISVPVGKETLGRIMNVIGEPVDEAGPVETSSRRAIHQDAPAYVEQSTE 156
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER
Sbjct: 157 AQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 216
Query: 233 TREGNDLYHEMIESGV 248
TREGNDLYHEMIESGV
Sbjct: 217 TREGNDLYHEMIESGV 232
>sp|P38482|ATPBM_CHLRE ATP synthase subunit beta, mitochondrial OS=Chlamydomonas
reinhardtii GN=ATP2 PE=1 SV=1
Length = 574
Score = 312 bits (800), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/211 (73%), Positives = 179/211 (84%), Gaps = 2/211 (0%)
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
G V VIG VVDV+FD +LP IL+ALEV+G + RLVLEVAQH+G+NTVR +AMD T+GLV
Sbjct: 38 GFVSQVIGPVVDVRFDGELPSILSALEVQGHNVRLVLEVAQHMGDNTVRCVAMDSTDGLV 97
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RGQ V ++G+PIK+PVG TLGRI+NVIGEP+DE+GPI+ + +IH +APEF E S EQ
Sbjct: 98 RGQKVVNTGSPIKVPVGRGTLGRIMNVIGEPVDEQGPIECSEVWSIHREAPEFTEQSTEQ 157
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
EILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGERT
Sbjct: 158 EILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 217
Query: 234 REGNDLYHEMIESGVISLKDK--SSKVNFLF 262
REGNDLY EMIESGVI L DK SK ++
Sbjct: 218 REGNDLYREMIESGVIKLGDKRGESKCTLVY 248
>sp|Q01859|ATPBM_ORYSJ ATP synthase subunit beta, mitochondrial OS=Oryza sativa subsp.
japonica GN=ATPB PE=1 SV=2
Length = 552
Score = 311 bits (797), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 158/204 (77%), Positives = 174/204 (85%)
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
G+V VIGAVVDV+FD LPPIL ALEV + RLVLEVAQHLGEN VRTIAMDGTEGLV
Sbjct: 82 GQVCQVIGAVVDVRFDEGLPPILTALEVLDHNIRLVLEVAQHLGENMVRTIAMDGTEGLV 141
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RGQ V ++G+PI +PVG TLGRI+NVIGEPIDE+G I T+ IH +AP FVE + EQ
Sbjct: 142 RGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGDITTNHFLPIHREAPAFVEQATEQ 201
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
+ILVTGIKVVDLLAPY +GGKIGLFGGAGVGKTVLIMELINNVAKAHGG+SVFAGVGERT
Sbjct: 202 QILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERT 261
Query: 234 REGNDLYHEMIESGVISLKDKSSK 257
REGNDLY EMIESGVI L DK S+
Sbjct: 262 REGNDLYREMIESGVIKLGDKQSE 285
>sp|Q1MAZ2|ATPB_RHIL3 ATP synthase subunit beta OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=atpD PE=3 SV=1
Length = 478
Score = 311 bits (796), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/206 (77%), Positives = 170/206 (82%)
Query: 43 AAKAAPKGKGNGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVR 102
A A PK GRV VIGAVVDV F+ +LP ILNALE RLVLEVAQHLGEN VR
Sbjct: 2 AEAATPKIGSVGRVTQVIGAVVDVAFEGELPKILNALETSNNGNRLVLEVAQHLGENVVR 61
Query: 103 TIAMDGTEGLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHAD 162
TIAMD +EGLVRGQ VAD+G PI +PVG ETLGRI+NVIGEP+DE GP+ T AIH D
Sbjct: 62 TIAMDSSEGLVRGQEVADTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQD 121
Query: 163 APEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 222
AP +VE S E +ILVTGIKVVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINNVAKAHGG
Sbjct: 122 APSYVEQSTESQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 181
Query: 223 YSVFAGVGERTREGNDLYHEMIESGV 248
YSVFAGVGERTREGNDLYHEMIES V
Sbjct: 182 YSVFAGVGERTREGNDLYHEMIESNV 207
>sp|Q0C100|ATPB_HYPNA ATP synthase subunit beta OS=Hyphomonas neptunium (strain ATCC
15444) GN=atpD PE=3 SV=1
Length = 475
Score = 311 bits (796), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 154/205 (75%), Positives = 171/205 (83%)
Query: 51 KGNGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTE 110
G GR+ VIGAVVDV+FD +LP ILNALE RLVLEVAQHLGENTVRTIAMD TE
Sbjct: 6 NGKGRISQVIGAVVDVEFDGELPSILNALETFNNGSRLVLEVAQHLGENTVRTIAMDSTE 65
Query: 111 GLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMS 170
GLVRGQ V+D G PI +PVG TLGRI+NVIGEPIDERGP++ D IHA AP FV+ +
Sbjct: 66 GLVRGQPVSDIGTPITVPVGPATLGRIMNVIGEPIDERGPVNADTYMPIHAQAPAFVDQA 125
Query: 171 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 230
E E+LVTGIKV+DLL PYAKGGKIGLFGGAGVGKTVLIMEL+NN+AK GGYSVFAGVG
Sbjct: 126 TESEVLVTGIKVIDLLCPYAKGGKIGLFGGAGVGKTVLIMELVNNIAKLFGGYSVFAGVG 185
Query: 231 ERTREGNDLYHEMIESGVISLKDKS 255
ERTREGNDLYHEMIES VI+L+ +S
Sbjct: 186 ERTREGNDLYHEMIESNVINLEGES 210
>sp|Q2K3H0|ATPB_RHIEC ATP synthase subunit beta OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=atpD PE=3 SV=1
Length = 475
Score = 310 bits (793), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 155/195 (79%), Positives = 168/195 (86%)
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
G+V VIGAVVDV F+ +LP ILNALE + RLVLEVAQHLGEN VRTIAMD +EGLV
Sbjct: 10 GKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSEGLV 69
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RGQ V D+G PI +PVG ETLGRI+NVIGEP+DE GP++T AIH DAP +VE S E
Sbjct: 70 RGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTAHKRAIHQDAPAYVEQSTEA 129
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT
Sbjct: 130 QILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 189
Query: 234 REGNDLYHEMIESGV 248
REGNDLYHEMIESGV
Sbjct: 190 REGNDLYHEMIESGV 204
>sp|Q2VZN2|ATPB_MAGSA ATP synthase subunit beta OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=atpD PE=3 SV=1
Length = 474
Score = 309 bits (791), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/212 (73%), Positives = 174/212 (82%)
Query: 51 KGNGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTE 110
K G + V+GAVVDV+FD LP IL+AL +E + +LVLEVAQHLGE+TVRTIAMD T+
Sbjct: 4 KNVGTITQVLGAVVDVRFDGQLPAILSALHLEHQGKKLVLEVAQHLGESTVRTIAMDSTD 63
Query: 111 GLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMS 170
GL RG V D+G I++PVG ETLGRIINVIGEPIDERGPI + IHADAPEFV+ S
Sbjct: 64 GLTRGTEVVDTGAAIQMPVGPETLGRIINVIGEPIDERGPIGNKTTLPIHADAPEFVDQS 123
Query: 171 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 230
E EILVTGIKV+DLLAPY KGGKIGL GGAGVGKTVLIMELINN+AKAHGGYSVFAGVG
Sbjct: 124 TETEILVTGIKVIDLLAPYCKGGKIGLCGGAGVGKTVLIMELINNIAKAHGGYSVFAGVG 183
Query: 231 ERTREGNDLYHEMIESGVISLKDKSSKVNFLF 262
ERTREGNDLYHEMIESGVI L SKV ++
Sbjct: 184 ERTREGNDLYHEMIESGVIKLDGPGSKVALVY 215
>sp|Q92LK8|ATPB_RHIME ATP synthase subunit beta OS=Rhizobium meliloti (strain 1021)
GN=atpD PE=3 SV=1
Length = 504
Score = 309 bits (791), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/196 (79%), Positives = 168/196 (85%), Gaps = 1/196 (0%)
Query: 54 GRVVAVIGAVVDVQFDH-DLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
GRV VIGAVVDV F+ LP ILNALE + RLVLEVAQHLGEN+VRTIAMD TEGL
Sbjct: 36 GRVTQVIGAVVDVAFEEGQLPQILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGL 95
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRGQ VAD+G PI +PVG ETLGRI+NVIGEP+DE GP+ T AIH +AP +V+ S E
Sbjct: 96 VRGQKVADTGGPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQEAPAYVDQSTE 155
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER
Sbjct: 156 AQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 215
Query: 233 TREGNDLYHEMIESGV 248
TREGNDLYHEMIESGV
Sbjct: 216 TREGNDLYHEMIESGV 231
>sp|B5ZSN7|ATPB_RHILW ATP synthase subunit beta OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=atpD PE=3 SV=1
Length = 478
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/206 (76%), Positives = 170/206 (82%)
Query: 43 AAKAAPKGKGNGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVR 102
A A PK GRV VIGAVVDV F+ +LP ILNALE RLVLEVAQHLGEN VR
Sbjct: 2 AEAATPKIGSVGRVTQVIGAVVDVAFEGELPKILNALETTNNGVRLVLEVAQHLGENEVR 61
Query: 103 TIAMDGTEGLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHAD 162
TIAMD +EGLVRGQ V+D+G PI +PVG ETLGRI+NVIGEP+DE GP+ T AIH D
Sbjct: 62 TIAMDSSEGLVRGQEVSDTGAPIMVPVGNETLGRIMNVIGEPVDEAGPLVTAHKRAIHQD 121
Query: 163 APEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 222
AP +VE S E +ILVTGIKVVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINNVAKAHGG
Sbjct: 122 APSYVEQSTEAQILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGG 181
Query: 223 YSVFAGVGERTREGNDLYHEMIESGV 248
YSVFAGVGERTREGNDLYHEMIES V
Sbjct: 182 YSVFAGVGERTREGNDLYHEMIESNV 207
>sp|Q3J431|ATPB1_RHOS4 ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpD1 PE=3 SV=1
Length = 475
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/211 (73%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 53 NGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
G+V VIGAVVDVQFD LPPILNALE E RLVLEVAQHLGE+TVRTIAMD TEGL
Sbjct: 6 QGKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGL 65
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRG V D+G+PI +PVG TLGRI+NVIGEPIDE+G + + AIH AP F E S
Sbjct: 66 VRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTT 125
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
EILVTGIKV+DLLAPY+KGGKIGLFGGAGVGKTVLIMELINN+AK H GYSVFAGVGER
Sbjct: 126 SEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 185
Query: 233 TREGNDLYHEMIESGVISLKDKS-SKVNFLF 262
TREGNDLYHEMIESGVI + + S SKV ++
Sbjct: 186 TREGNDLYHEMIESGVIKIDNLSESKVALVY 216
>sp|A3PIB9|ATPB1_RHOS1 ATP synthase subunit beta 1 OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=atpD1 PE=3 SV=1
Length = 475
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/211 (73%), Positives = 172/211 (81%), Gaps = 1/211 (0%)
Query: 53 NGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
G+V VIGAVVDVQFD LPPILNALE E RLVLEVAQHLGE+TVRTIAMD TEGL
Sbjct: 6 QGKVTQVIGAVVDVQFDGGLPPILNALETENNGKRLVLEVAQHLGESTVRTIAMDATEGL 65
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRG V D+G+PI +PVG TLGRI+NVIGEPIDE+G + + AIH AP F E S
Sbjct: 66 VRGARVTDTGSPISVPVGDATLGRILNVIGEPIDEKGDLGEASTRAIHQPAPTFAEQSTT 125
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
EILVTGIKV+DLLAPY+KGGKIGLFGGAGVGKTVLIMELINN+AK H GYSVFAGVGER
Sbjct: 126 SEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 185
Query: 233 TREGNDLYHEMIESGVISLKDKS-SKVNFLF 262
TREGNDLYHEMIESGVI + + S SKV ++
Sbjct: 186 TREGNDLYHEMIESGVIKIDNLSESKVALVY 216
>sp|B3PQ68|ATPB_RHIE6 ATP synthase subunit beta OS=Rhizobium etli (strain CIAT 652)
GN=atpD PE=3 SV=1
Length = 475
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/195 (78%), Positives = 168/195 (86%)
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
G+V VIGAVVDV F+ +LP ILNALE + RLVLEVAQHLGEN VRTIAMD +EGLV
Sbjct: 10 GKVTQVIGAVVDVAFEGELPAILNALETDNNGNRLVLEVAQHLGENEVRTIAMDSSEGLV 69
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RGQ V D+G PI +PVG ETLGRI+NVIGEP+DE GP++T AIH DAP +VE S E
Sbjct: 70 RGQQVIDTGAPISVPVGDETLGRIMNVIGEPVDEAGPLNTAHKRAIHQDAPAYVEQSTEA 129
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
+ILVTGIKVVDLLAPYA+GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT
Sbjct: 130 QILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 189
Query: 234 REGNDLYHEMIESGV 248
REGNDLYHEMIESGV
Sbjct: 190 REGNDLYHEMIESGV 204
>sp|A6UDM1|ATPB_SINMW ATP synthase subunit beta OS=Sinorhizobium medicae (strain WSM419)
GN=atpD PE=3 SV=1
Length = 509
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/196 (79%), Positives = 167/196 (85%), Gaps = 1/196 (0%)
Query: 54 GRVVAVIGAVVDVQFDH-DLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
GRV VIGAVVDV F+ LP ILNALE + RLVLEVAQHLGEN+VRTIAMD TEGL
Sbjct: 41 GRVTQVIGAVVDVAFEEGQLPKILNALETDNNGNRLVLEVAQHLGENSVRTIAMDSTEGL 100
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRGQ V D+G PI +PVG ETLGRI+NVIGEP+DE GP+ T AIH DAP +V+ S E
Sbjct: 101 VRGQKVTDTGAPIAVPVGKETLGRIMNVIGEPVDEAGPLKTSARRAIHQDAPAYVDQSTE 160
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
+ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER
Sbjct: 161 AQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 220
Query: 233 TREGNDLYHEMIESGV 248
TREGNDLYHEMIESGV
Sbjct: 221 TREGNDLYHEMIESGV 236
>sp|A4WUM7|ATPB_RHOS5 ATP synthase subunit beta OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=atpD PE=3 SV=1
Length = 475
Score = 308 bits (788), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/211 (73%), Positives = 170/211 (80%), Gaps = 1/211 (0%)
Query: 53 NGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
G+V VIGAVVDVQFD LP ILNALE RLVLEVAQHLGENTVRTIAMD TEGL
Sbjct: 6 QGKVTQVIGAVVDVQFDGGLPAILNALETVNNDKRLVLEVAQHLGENTVRTIAMDATEGL 65
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRG V D G PI +PVG TLGRI+NVIGEPIDE+GP+ D + AIH AP F E S
Sbjct: 66 VRGAPVTDLGGPISVPVGDATLGRILNVIGEPIDEKGPVSGDSTRAIHQPAPTFAEQSTT 125
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
EILVTGIKV+DLLAPY+KGGKIGLFGGAGVGKTVLIMELINN+AK H GYSVFAGVGER
Sbjct: 126 SEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGER 185
Query: 233 TREGNDLYHEMIESGVISLKDKS-SKVNFLF 262
TREGNDLYHEMI+SGVI + + S SKV ++
Sbjct: 186 TREGNDLYHEMIDSGVIKIDNLSESKVALVY 216
>sp|A1B8P0|ATPB_PARDP ATP synthase subunit beta OS=Paracoccus denitrificans (strain Pd
1222) GN=atpD PE=3 SV=1
Length = 474
Score = 306 bits (785), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 152/213 (71%), Positives = 173/213 (81%), Gaps = 1/213 (0%)
Query: 51 KGNGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTE 110
+ NG++ VIGAVVDVQFD LP ILNALE E RLVLEVAQHLGENTVRTIAMD TE
Sbjct: 3 EANGKITQVIGAVVDVQFDGQLPAILNALETENNGKRLVLEVAQHLGENTVRTIAMDATE 62
Query: 111 GLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMS 170
GLVRG V D+G PI +PVG TLGRI+NV+GEP+DE GP++ ++ AIH AP+F +
Sbjct: 63 GLVRGLPVKDTGGPIMVPVGDATLGRILNVVGEPVDEGGPVEATQTRAIHQQAPDFAAQA 122
Query: 171 VEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVG 230
EILVTGIKV+DLLAPY+KGGKIGLFGGAGVGKTVLIMELINN+AK H GYSVFAGVG
Sbjct: 123 TASEILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVG 182
Query: 231 ERTREGNDLYHEMIESGVISLKDKS-SKVNFLF 262
ERTREGNDLYHEM+ESGVI D S S+V ++
Sbjct: 183 ERTREGNDLYHEMVESGVIKPDDLSKSQVALVY 215
>sp|P49376|ATPB_KLULA ATP synthase subunit beta, mitochondrial OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ATP2 PE=3 SV=2
Length = 505
Score = 306 bits (785), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 162/228 (71%), Positives = 184/228 (80%), Gaps = 6/228 (2%)
Query: 36 FTINKHYAAKAAPKGKGNGRVVAVIGAVVDVQFDH-DLPPILNALEVEGRSPRLVLEVAQ 94
FT + YAA A+ +GK V AVIGA+VDVQF+ LP ILNALE++ +LVLEVAQ
Sbjct: 24 FTGVRGYAAAASSQGK----VRAVIGAIVDVQFEQGQLPAILNALEIDTPEGKLVLEVAQ 79
Query: 95 HLGENTVRTIAMDGTEGLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTD 154
HLGENTVRTIAMDGTEGLVRG+ V+D+G PI +PVG ETLGRIINVIGEPIDERGPI++
Sbjct: 80 HLGENTVRTIAMDGTEGLVRGENVSDTGAPISVPVGRETLGRIINVIGEPIDERGPINSK 139
Query: 155 KSAAIHADAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELIN 214
IHAD P FVE S E+L TGIKVVDLLAPYA+GGKIGLFGGAGVGKTV I ELIN
Sbjct: 140 MRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELIN 199
Query: 215 NVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVISLKDKSSKVNFLF 262
N+AKAHGG+SVF GVGERTREGNDLY EM E+GVI+L + SKV +F
Sbjct: 200 NIAKAHGGFSVFTGVGERTREGNDLYREMKETGVINL-EGDSKVALVF 246
>sp|Q57B88|ATPB_BRUAB ATP synthase subunit beta OS=Brucella abortus biovar 1 (strain
9-941) GN=atpD PE=3 SV=1
Length = 521
Score = 306 bits (785), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/197 (79%), Positives = 170/197 (86%), Gaps = 1/197 (0%)
Query: 56 VVAVIGAVVDVQF-DHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVR 114
+ VIGAVVDV+F + LP ILNALEV+ + RLVLEVAQHLGE+TVRTIAMD TEGLVR
Sbjct: 55 ITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVR 114
Query: 115 GQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQE 174
GQ D+G PI +PVG ETLGRI+NVIGEP+DE GPI T + AIH +APE++E S E E
Sbjct: 115 GQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAE 174
Query: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR
Sbjct: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
Query: 235 EGNDLYHEMIESGVISL 251
EGNDLYHEMIESGV L
Sbjct: 235 EGNDLYHEMIESGVNKL 251
>sp|Q2YLE6|ATPB_BRUA2 ATP synthase subunit beta OS=Brucella abortus (strain 2308) GN=atpD
PE=3 SV=1
Length = 521
Score = 306 bits (785), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/197 (79%), Positives = 170/197 (86%), Gaps = 1/197 (0%)
Query: 56 VVAVIGAVVDVQF-DHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVR 114
+ VIGAVVDV+F + LP ILNALEV+ + RLVLEVAQHLGE+TVRTIAMD TEGLVR
Sbjct: 55 ITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVR 114
Query: 115 GQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQE 174
GQ D+G PI +PVG ETLGRI+NVIGEP+DE GPI T + AIH +APE++E S E E
Sbjct: 115 GQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAE 174
Query: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR
Sbjct: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
Query: 235 EGNDLYHEMIESGVISL 251
EGNDLYHEMIESGV L
Sbjct: 235 EGNDLYHEMIESGVNKL 251
>sp|Q8FYR5|ATPB_BRUSU ATP synthase subunit beta OS=Brucella suis biovar 1 (strain 1330)
GN=atpD PE=3 SV=1
Length = 521
Score = 306 bits (784), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 156/197 (79%), Positives = 170/197 (86%), Gaps = 1/197 (0%)
Query: 56 VVAVIGAVVDVQF-DHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVR 114
+ VIGAVVDV+F + LP ILNALEV+ + RLVLEVAQHLGE+TVRTIAMD TEGLVR
Sbjct: 55 ITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVR 114
Query: 115 GQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQE 174
GQ D+G PI +PVG ETLGRI+NVIGEP+DE GPI T + AIH +APE++E S E E
Sbjct: 115 GQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAE 174
Query: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR
Sbjct: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
Query: 235 EGNDLYHEMIESGVISL 251
EGNDLYHEMIESGV L
Sbjct: 235 EGNDLYHEMIESGVNKL 251
>sp|A9WWS2|ATPB_BRUSI ATP synthase subunit beta OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=atpD PE=3 SV=1
Length = 521
Score = 306 bits (784), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 156/197 (79%), Positives = 170/197 (86%), Gaps = 1/197 (0%)
Query: 56 VVAVIGAVVDVQF-DHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVR 114
+ VIGAVVDV+F + LP ILNALEV+ + RLVLEVAQHLGE+TVRTIAMD TEGLVR
Sbjct: 55 ITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVR 114
Query: 115 GQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQE 174
GQ D+G PI +PVG ETLGRI+NVIGEP+DE GPI T + AIH +APE++E S E E
Sbjct: 115 GQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAE 174
Query: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR
Sbjct: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
Query: 235 EGNDLYHEMIESGVISL 251
EGNDLYHEMIESGV L
Sbjct: 235 EGNDLYHEMIESGVNKL 251
>sp|A5VSE1|ATPB_BRUO2 ATP synthase subunit beta OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=atpD PE=3 SV=1
Length = 521
Score = 306 bits (784), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 156/197 (79%), Positives = 170/197 (86%), Gaps = 1/197 (0%)
Query: 56 VVAVIGAVVDVQF-DHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVR 114
+ VIGAVVDV+F + LP ILNALEV+ + RLVLEVAQHLGE+TVRTIAMD TEGLVR
Sbjct: 55 ITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVR 114
Query: 115 GQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQE 174
GQ D+G PI +PVG ETLGRI+NVIGEP+DE GPI T + AIH +APE++E S E E
Sbjct: 115 GQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAE 174
Query: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR
Sbjct: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
Query: 235 EGNDLYHEMIESGVISL 251
EGNDLYHEMIESGV L
Sbjct: 235 EGNDLYHEMIESGVNKL 251
>sp|Q8YJ35|ATPB_BRUME ATP synthase subunit beta OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=atpD PE=3 SV=1
Length = 521
Score = 306 bits (784), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 156/197 (79%), Positives = 170/197 (86%), Gaps = 1/197 (0%)
Query: 56 VVAVIGAVVDVQF-DHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVR 114
+ VIGAVVDV+F + LP ILNALEV+ + RLVLEVAQHLGE+TVRTIAMD TEGLVR
Sbjct: 55 ITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVR 114
Query: 115 GQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQE 174
GQ D+G PI +PVG ETLGRI+NVIGEP+DE GPI T + AIH +APE++E S E E
Sbjct: 115 GQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAE 174
Query: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR
Sbjct: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
Query: 235 EGNDLYHEMIESGVISL 251
EGNDLYHEMIESGV L
Sbjct: 235 EGNDLYHEMIESGVNKL 251
>sp|A9M837|ATPB_BRUC2 ATP synthase subunit beta OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=atpD PE=3 SV=1
Length = 521
Score = 306 bits (784), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 156/197 (79%), Positives = 170/197 (86%), Gaps = 1/197 (0%)
Query: 56 VVAVIGAVVDVQF-DHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVR 114
+ VIGAVVDV+F + LP ILNALEV+ + RLVLEVAQHLGE+TVRTIAMD TEGLVR
Sbjct: 55 ITQVIGAVVDVKFPEGQLPLILNALEVDNQGHRLVLEVAQHLGEDTVRTIAMDATEGLVR 114
Query: 115 GQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQE 174
GQ D+G PI +PVG ETLGRI+NVIGEP+DE GPI T + AIH +APE++E S E E
Sbjct: 115 GQEARDTGEPIMVPVGVETLGRIMNVIGEPVDEAGPIKTKATRAIHQNAPEYIEQSTEAE 174
Query: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR
Sbjct: 175 ILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTR 234
Query: 235 EGNDLYHEMIESGVISL 251
EGNDLYHEMIESGV L
Sbjct: 235 EGNDLYHEMIESGVNKL 251
>sp|P00830|ATPB_YEAST ATP synthase subunit beta, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ATP2 PE=1
SV=2
Length = 511
Score = 305 bits (782), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 167/263 (63%), Positives = 188/263 (71%), Gaps = 17/263 (6%)
Query: 1 MLGAISRATAGALKAVKPTLNPALLQGEASKAVAGFTINKHYAAKAAPKGKGNGRVVAVI 60
+ A SRA A K P L+ T K A AA G+V AVI
Sbjct: 6 LYTATSRAAFKAAKQSAPLLS---------------TSWKRCMASAAQSTPITGKVTAVI 50
Query: 61 GAVVDVQFDH-DLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQVVA 119
GA+VDV F+ +LP ILNALE++ +LVLEVAQHLGENTVRTIAMDGTEGLVRG+ V
Sbjct: 51 GAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVL 110
Query: 120 DSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQEILVTG 179
D+G PI +PVG ETLGRIINVIGEPIDERGPI + IHAD P F E S EIL TG
Sbjct: 111 DTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETG 170
Query: 180 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDL 239
IKVVDLLAPYA+GGKIGLFGGAGVGKTV I ELINN+AKAHGG+SVF GVGERTREGNDL
Sbjct: 171 IKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTGVGERTREGNDL 230
Query: 240 YHEMIESGVISLKDKSSKVNFLF 262
Y EM E+GVI+L+ + SKV +F
Sbjct: 231 YREMKETGVINLEGE-SKVALVF 252
>sp|Q3SVJ1|ATPB_NITWN ATP synthase subunit beta OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=atpD PE=3 SV=1
Length = 476
Score = 305 bits (781), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/195 (77%), Positives = 167/195 (85%)
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
GR+ VIGAVVDVQF+ LP ILNA+E + RLVLEVAQHLGE+TVRTIAMD TEGLV
Sbjct: 9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGENRLVLEVAQHLGESTVRTIAMDTTEGLV 68
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RGQ V D+G PI++PVGA TLGRI+NVIGEP+DE+GP+ D IHA+AP + + S E
Sbjct: 69 RGQDVTDTGAPIRVPVGAGTLGRIMNVIGEPVDEQGPVKADDLRPIHAEAPSYTDQSTEA 128
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLI ELINNVAKAHGGYSVFAGVGERT
Sbjct: 129 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERT 188
Query: 234 REGNDLYHEMIESGV 248
REGNDLYHE IESGV
Sbjct: 189 REGNDLYHEFIESGV 203
>sp|A8LJR4|ATPB2_DINSH ATP synthase subunit beta 2 OS=Dinoroseobacter shibae (strain DFL
12) GN=atpD2 PE=3 SV=1
Length = 474
Score = 305 bits (780), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/210 (73%), Positives = 171/210 (81%), Gaps = 1/210 (0%)
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
G+V VIGAVVDVQF+ LP ILNAL E +LVLEVAQHLGENTVRTIAMD TEGLV
Sbjct: 6 GKVTQVIGAVVDVQFEDTLPEILNALNTENNGKKLVLEVAQHLGENTVRTIAMDATEGLV 65
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RG V D+G PI IPVG TLGRI+NVIGEPIDE+GP++ +S AIH APEF E S
Sbjct: 66 RGAEVTDTGGPITIPVGNATLGRIMNVIGEPIDEKGPVEASESRAIHQPAPEFSEQSTGS 125
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
EILVTGIKV+DLLAPY+KGGKIGLFGGAGVGKTVLIMELINN+AK H GYSVFAGVGERT
Sbjct: 126 EILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGYSVFAGVGERT 185
Query: 234 REGNDLYHEMIESGVISLKDKS-SKVNFLF 262
REGNDLYHEMIES VI + S S+V ++
Sbjct: 186 REGNDLYHEMIESNVIKPDNLSESQVALVY 215
>sp|B6JD09|ATPB_OLICO ATP synthase subunit beta OS=Oligotropha carboxidovorans (strain
ATCC 49405 / DSM 1227 / OM5) GN=atpD PE=3 SV=1
Length = 476
Score = 304 bits (779), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/195 (77%), Positives = 165/195 (84%)
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
GR+ VIGAVVDVQFD LP ILNA+E + RLVLEVAQHLGE+TVR IAMD TEGLV
Sbjct: 9 GRITQVIGAVVDVQFDGYLPAILNAIETTNQGHRLVLEVAQHLGESTVRAIAMDTTEGLV 68
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RGQ V D+G PIK+PVG TLGRI+NV+GEP+DE GP+ D + AIH +AP + E S E
Sbjct: 69 RGQEVTDTGAPIKVPVGEGTLGRIMNVVGEPVDEGGPVKADGTRAIHQEAPAYTEQSTEA 128
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLI ELINNVAKAHGGYSVFAGVGERT
Sbjct: 129 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERT 188
Query: 234 REGNDLYHEMIESGV 248
REGNDLYHE IESGV
Sbjct: 189 REGNDLYHEFIESGV 203
>sp|P72247|ATPB_RHOCA ATP synthase subunit beta OS=Rhodobacter capsulatus GN=atpD PE=1
SV=3
Length = 472
Score = 304 bits (779), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/211 (72%), Positives = 173/211 (81%), Gaps = 1/211 (0%)
Query: 53 NGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
G+V VIGAVVDVQF+ LP ILNALE RLVLEVAQHLGENTVRTIAMD TEGL
Sbjct: 4 KGKVTQVIGAVVDVQFEDGLPAILNALETTNNGKRLVLEVAQHLGENTVRTIAMDATEGL 63
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRG V+D+G PI +PVG TLGRI+NVIGEP+DERG + ++ AIH AP+F S E
Sbjct: 64 VRGAAVSDTGGPITVPVGNATLGRILNVIGEPVDERGDVSKAEARAIHQPAPDFAAQSTE 123
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
+ILVTGIKV+DLLAPY+KGGKIGLFGGAGVGKTVLIMELINN+AK H G+SVFAGVGER
Sbjct: 124 SQILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKVHSGFSVFAGVGER 183
Query: 233 TREGNDLYHEMIESGVISL-KDKSSKVNFLF 262
TREGNDLYHEMIESGVI+L K + SKV ++
Sbjct: 184 TREGNDLYHEMIESGVINLEKLEESKVALVY 214
>sp|Q1GQS5|ATPB_SPHAL ATP synthase subunit beta OS=Sphingopyxis alaskensis (strain DSM
13593 / LMG 18877 / RB2256) GN=atpD PE=3 SV=1
Length = 513
Score = 304 bits (779), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/220 (70%), Positives = 176/220 (80%), Gaps = 8/220 (3%)
Query: 50 GKGNGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGT 109
G GR+ VIGAVVDVQF +LP ILNALE + RLVLEVAQHLGENTVRTIAMD T
Sbjct: 37 GAATGRIAQVIGAVVDVQFTGELPAILNALETDNNGNRLVLEVAQHLGENTVRTIAMDAT 96
Query: 110 EGLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEM 169
+GL RGQ V D+G I +PVG +TLGRI+NVIGEPIDERGP+++D +A IHA APEFV+
Sbjct: 97 DGLTRGQPVRDTGAQISVPVGPQTLGRILNVIGEPIDERGPVNSDMTAPIHAKAPEFVDQ 156
Query: 170 SVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGV 229
S E ILVTGIKV+DL+APYAKGGKIGLFGGAGVGKTVLI ELINN+AK HGG SVFAGV
Sbjct: 157 STEASILVTGIKVIDLIAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGV 216
Query: 230 GERTREGNDLYHEMIESGVISLKDKS-------SKVNFLF 262
GERTREGNDLYHE +++GVI+ KD SKV +F
Sbjct: 217 GERTREGNDLYHEFLDAGVIA-KDADGNPTPDGSKVALVF 255
>sp|A7IH31|ATPB_XANP2 ATP synthase subunit beta OS=Xanthobacter autotrophicus (strain
ATCC BAA-1158 / Py2) GN=atpD PE=3 SV=1
Length = 478
Score = 303 bits (776), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 151/195 (77%), Positives = 165/195 (84%)
Query: 54 GRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGLV 113
GR+ VIGAVVDVQFD LP ILNALE + RLVLEVAQHLGE+TVR IAMD TEGLV
Sbjct: 6 GRITQVIGAVVDVQFDGHLPEILNALETTNQGNRLVLEVAQHLGESTVRCIAMDATEGLV 65
Query: 114 RGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVEQ 173
RG V D+G PI++PVGA TLGRI+NVIGEP+DE GPI+ + + IH AP + E + E
Sbjct: 66 RGLEVTDTGAPIQVPVGAGTLGRIMNVIGEPVDELGPIEAEATRGIHQPAPSYAEQATEA 125
Query: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 233
EILVTGIKVVDLLAPYAKGGK+GLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT
Sbjct: 126 EILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERT 185
Query: 234 REGNDLYHEMIESGV 248
REGNDLYHEMIES V
Sbjct: 186 REGNDLYHEMIESNV 200
>sp|A8HS10|ATPB_AZOC5 ATP synthase subunit beta OS=Azorhizobium caulinodans (strain ATCC
43989 / DSM 5975 / ORS 571) GN=atpD PE=3 SV=1
Length = 478
Score = 303 bits (776), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 151/196 (77%), Positives = 164/196 (83%)
Query: 53 NGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
+GR+ VIGAVVDVQFD LP ILNALE + RLVLEVAQHLGENTVRTIAMD TEGL
Sbjct: 5 SGRITQVIGAVVDVQFDSHLPEILNALETTNQGNRLVLEVAQHLGENTVRTIAMDSTEGL 64
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRGQ V D+G PI +PVG TLGRI+NVIGE +DE GP+ + AIH AP + E S E
Sbjct: 65 VRGQAVEDTGGPIMVPVGEATLGRIMNVIGEAVDELGPVVGEAKRAIHQQAPSYSEQSTE 124
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
E+LVTGIKVVDLLAPY+KGGKIGLFGGAGVGKTVLIMELINN+AKAHGGYSVFAGVGER
Sbjct: 125 AEMLVTGIKVVDLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAGVGER 184
Query: 233 TREGNDLYHEMIESGV 248
TREGNDLYHEMIES V
Sbjct: 185 TREGNDLYHEMIESKV 200
>sp|Q6NDD2|ATPB_RHOPA ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=atpD PE=3 SV=1
Length = 476
Score = 303 bits (775), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/196 (77%), Positives = 167/196 (85%)
Query: 53 NGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
GR+ VIGAVVDVQF+ LP ILNA+E + RLVLEVAQHLGE+TVRTIAMD TEGL
Sbjct: 8 TGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGL 67
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRGQ V D+G PI +PVGA TLGRI+NVIGEP+DE+GPI ++ AIH +AP + + S E
Sbjct: 68 VRGQEVTDTGAPISVPVGAGTLGRIMNVIGEPVDEQGPIKSEGLRAIHQEAPAYTDQSTE 127
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLI ELINNVA+AHGGYSVFAGVGER
Sbjct: 128 AEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVARAHGGYSVFAGVGER 187
Query: 233 TREGNDLYHEMIESGV 248
TREGNDLYHE IESGV
Sbjct: 188 TREGNDLYHEFIESGV 203
>sp|P05440|ATPB_RHOBL ATP synthase subunit beta OS=Rhodopseudomonas blastica GN=atpD PE=3
SV=1
Length = 478
Score = 303 bits (775), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 170/211 (80%), Gaps = 1/211 (0%)
Query: 53 NGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIAMDGTEGL 112
G+V VIGAVVDVQF+ LP ILNALE +L+LEVAQHLGENTVR IAMD TEGL
Sbjct: 9 KGKVTQVIGAVVDVQFEGVLPAILNALETTNNGKKLILEVAQHLGENTVRCIAMDATEGL 68
Query: 113 VRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPEFVEMSVE 172
VRG V+DSG PI +PVG TLGRI+NV+GEPIDERGPI + AIH AP+F S E
Sbjct: 69 VRGAPVSDSGTPISVPVGNATLGRILNVVGEPIDERGPIAATEKRAIHQKAPDFQSQSTE 128
Query: 173 QEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGER 232
+ILVTGIKV+DLLAPY+KGGKIGLFGGAGVGKTVLI ELINN+AK H GYSVFAGVGER
Sbjct: 129 SQILVTGIKVIDLLAPYSKGGKIGLFGGAGVGKTVLIQELINNIAKVHSGYSVFAGVGER 188
Query: 233 TREGNDLYHEMIESGVISLKD-KSSKVNFLF 262
TREGNDLYHE IESGVI++ D + SKV ++
Sbjct: 189 TREGNDLYHEFIESGVINIDDLEKSKVALVY 219
>sp|Q1QQS8|ATPB_NITHX ATP synthase subunit beta OS=Nitrobacter hamburgensis (strain X14 /
DSM 10229) GN=atpD PE=3 SV=1
Length = 476
Score = 302 bits (774), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/203 (75%), Positives = 170/203 (83%), Gaps = 1/203 (0%)
Query: 46 AAPKGKGNGRVVAVIGAVVDVQFDHDLPPILNALEVEGRSPRLVLEVAQHLGENTVRTIA 105
A+P + GR+ VIGAVVDVQF+ LP ILNA+E + RLVLEVAQHLGE+TVRTIA
Sbjct: 2 ASPANQ-TGRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIA 60
Query: 106 MDGTEGLVRGQVVADSGNPIKIPVGAETLGRIINVIGEPIDERGPIDTDKSAAIHADAPE 165
MD TEGLVRGQ V D+GNPI +PVG TLGRI+NVIGEP+DE+GP+ + AIH +AP
Sbjct: 61 MDTTEGLVRGQEVKDTGNPILVPVGVGTLGRIMNVIGEPVDEQGPVKAEDMRAIHQEAPL 120
Query: 166 FVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSV 225
+ + S E EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLI ELINNVAKAHGGYSV
Sbjct: 121 YTDQSTEAEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSV 180
Query: 226 FAGVGERTREGNDLYHEMIESGV 248
FAGVGERTREGNDLYHE IESGV
Sbjct: 181 FAGVGERTREGNDLYHEFIESGV 203
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.136 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,859,307
Number of Sequences: 539616
Number of extensions: 4380075
Number of successful extensions: 20003
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2304
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 16187
Number of HSP's gapped (non-prelim): 2592
length of query: 266
length of database: 191,569,459
effective HSP length: 115
effective length of query: 151
effective length of database: 129,513,619
effective search space: 19556556469
effective search space used: 19556556469
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)