Query psy17547
Match_columns 186
No_of_seqs 203 out of 448
Neff 5.0
Searched_HMMs 13730
Date Sat Aug 17 01:19:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17547.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17547hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2mrba_ g.46.1.1 (A:) Metallot 38.4 11 0.00077 20.7 2.3 21 2-22 5-28 (31)
2 d1e09a_ d.129.3.1 (A:) Major t 21.7 21 0.0015 25.8 2.1 16 136-151 143-158 (159)
3 d1fm4a_ d.129.3.1 (A:) Major t 19.8 24 0.0017 25.4 2.0 16 136-151 143-158 (159)
4 d2p5ka1 a.4.5.3 (A:2-64) Argin 15.9 51 0.0037 20.4 2.7 24 25-48 1-24 (63)
5 d1ml9a_ b.85.7.1 (A:) Dim-5 {F 14.1 93 0.0068 23.7 4.5 25 59-83 37-62 (284)
6 d1ixsa_ a.5.1.1 (A:) DNA helic 13.3 75 0.0055 19.0 2.8 24 26-49 19-42 (50)
7 d1t2ya_ g.46.1.1 (A:) Metallot 12.7 52 0.0038 17.0 1.7 16 6-21 8-24 (26)
8 d2hjqa1 a.140.3.2 (A:50-103) H 9.4 73 0.0053 19.1 1.8 19 29-47 20-38 (54)
9 d1j5ja_ g.3.7.2 (A:) Bekm-1 {L 9.1 35 0.0026 19.1 0.1 12 101-112 25-36 (36)
10 d1n8ma_ g.3.7.2 (A:) PI4, pota 7.8 39 0.0028 19.2 -0.0 14 173-186 22-35 (38)
No 1
>d2mrba_ g.46.1.1 (A:) Metallothionein {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=38.43 E-value=11 Score=20.65 Aligned_cols=21 Identities=38% Similarity=1.140 Sum_probs=17.0
Q ss_pred cccccCCCCCC---CCCCCCCCCC
Q psy17547 2 CDCFANGEFCY---QCNCNSCFNN 22 (186)
Q Consensus 2 CeCFa~g~~C~---~CnC~~C~N~ 22 (186)
|.|-|+|.-|+ .|.|..|+=+
T Consensus 5 cscaaagdsc~ca~sctck~ckct 28 (31)
T d2mrba_ 5 CSCAAAGDSCTCANSCTCKACKCT 28 (31)
T ss_dssp CCCCCSSSCCCCSSCCCCSSCCCT
T ss_pred ccccccCCcccccCceeecceeee
Confidence 78899999987 6888888654
No 2
>d1e09a_ d.129.3.1 (A:) Major tree pollen allergen {Sweet cherry (Prunus avium), pru av 1 [TaxId: 42229]}
Probab=21.73 E-value=21 Score=25.81 Aligned_cols=16 Identities=25% Similarity=0.495 Sum_probs=14.0
Q ss_pred hHHHHHHHHhhCCCcc
Q psy17547 136 RHHAIRQCLERNPNAF 151 (186)
Q Consensus 136 r~~ai~~il~RNP~AF 151 (186)
-.+||++.|..||+||
T Consensus 143 ~~K~iEayLlanp~~y 158 (159)
T d1e09a_ 143 LFKLIETYLKGHPDAY 158 (159)
T ss_dssp HHHHHHHHHHHCTTSC
T ss_pred HHHHHHHHHhhChhhc
Confidence 4688889999999997
No 3
>d1fm4a_ d.129.3.1 (A:) Major tree pollen allergen {European white birch (Betula pendula), Bet v 1-l [TaxId: 3505]}
Probab=19.75 E-value=24 Score=25.40 Aligned_cols=16 Identities=19% Similarity=0.293 Sum_probs=13.9
Q ss_pred hHHHHHHHHhhCCCcc
Q psy17547 136 RHHAIRQCLERNPNAF 151 (186)
Q Consensus 136 r~~ai~~il~RNP~AF 151 (186)
-.+||++-|..||+||
T Consensus 143 ~~K~iE~YLlanp~~y 158 (159)
T d1fm4a_ 143 LLRAVESYLLAHSDAY 158 (159)
T ss_dssp HHHHHHHHHHHCTTTT
T ss_pred HHHHHHHHHhhChhhc
Confidence 4688889999999997
No 4
>d2p5ka1 a.4.5.3 (A:2-64) Arginine repressor (ArgR), N-terminal DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=15.92 E-value=51 Score=20.39 Aligned_cols=24 Identities=21% Similarity=0.368 Sum_probs=17.4
Q ss_pred CHHHHHHHHHHHHHhCCCCccccc
Q psy17547 25 HEDDRHHAIRQCLERNPNAFRPKI 48 (186)
Q Consensus 25 ~~~~R~~Ai~~~l~rNP~AF~pki 48 (186)
+..+|+.+|..++..++-.=+..+
T Consensus 1 nK~~Rq~~I~~li~~~~i~tQ~eL 24 (63)
T d2p5ka1 1 NKGQRHIKIREIITSNEIETQDEL 24 (63)
T ss_dssp CHHHHHHHHHHHHHHSCCCSHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCHHHH
Confidence 356899999999998874433333
No 5
>d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]}
Probab=14.13 E-value=93 Score=23.66 Aligned_cols=25 Identities=28% Similarity=0.865 Sum_probs=18.4
Q ss_pred cccccccccCC-Cccccchhhhhccc
Q psy17547 59 RHTKGCNCKRS-GCLKNYCECYEAGA 83 (186)
Q Consensus 59 ~h~kGCnCKKS-~ClKkYCeCfq~g~ 83 (186)
....||.|.-+ .|....|.|.+...
T Consensus 37 ~~~~gC~C~~~~~c~~~~C~C~~~~~ 62 (284)
T d1ml9a_ 37 SFRVGCSCASDEECMYSTCQCLDEMA 62 (284)
T ss_dssp GGCCCCCCSSTTGGGSTTSGGGTTSC
T ss_pred cCCCCCCCcCCCCcCCCCCcChhhcC
Confidence 44569999865 46788899987654
No 6
>d1ixsa_ a.5.1.1 (A:) DNA helicase RuvA subunit, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=13.34 E-value=75 Score=18.96 Aligned_cols=24 Identities=21% Similarity=0.261 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhCCCCcccccc
Q psy17547 26 EDDRHHAIRQCLERNPNAFRPKIG 49 (186)
Q Consensus 26 ~~~R~~Ai~~~l~rNP~AF~pki~ 49 (186)
|.....++..++..||.|-...++
T Consensus 19 E~QvRsvVaell~~nP~a~aq~lI 42 (50)
T d1ixsa_ 19 EAQARAVVLDLLAQNPKARAQDLI 42 (50)
T ss_dssp HHHHHHHHHHHHHHCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHhCccccHHHHH
Confidence 455667888999999998766554
No 7
>d1t2ya_ g.46.1.1 (A:) Metallothionein {Neurospora crassa [TaxId: 5141]}
Probab=12.70 E-value=52 Score=16.98 Aligned_cols=16 Identities=31% Similarity=0.771 Sum_probs=10.8
Q ss_pred cCCCCCC-CCCCCCCCC
Q psy17547 6 ANGEFCY-QCNCNSCFN 21 (186)
Q Consensus 6 a~g~~C~-~CnC~~C~N 21 (186)
|+.--|+ +|.|.+|-.
T Consensus 8 asscncgsgcscsncgs 24 (26)
T d1t2ya_ 8 ASSCNCGSGCSCSNCGS 24 (26)
T ss_dssp TTTCCCSSSCCSSTTSC
T ss_pred cccccCCCCcccccccc
Confidence 3444566 899998853
No 8
>d2hjqa1 a.140.3.2 (A:50-103) Hypothetical protein YqbF {Bacillus subtilis [TaxId: 1423]}
Probab=9.39 E-value=73 Score=19.11 Aligned_cols=19 Identities=37% Similarity=0.635 Sum_probs=15.8
Q ss_pred HHHHHHHHHHhCCCCcccc
Q psy17547 29 RHHAIRQCLERNPNAFRPK 47 (186)
Q Consensus 29 R~~Ai~~~l~rNP~AF~pk 47 (186)
-++||-.-|.+||..|+..
T Consensus 20 ~~e~ii~~lg~~ps~fkn~ 38 (54)
T d2hjqa1 20 EHESIISNLGRNPSDFKNA 38 (54)
T ss_dssp HHHHHHHHHTCCTTSCCSH
T ss_pred cchhHHHhcCCChhhhcCh
Confidence 4678888899999999764
No 9
>d1j5ja_ g.3.7.2 (A:) Bekm-1 {Lesser asian scorpion (Buthus eupeus) [TaxId: 34648]}
Probab=9.09 E-value=35 Score=19.09 Aligned_cols=12 Identities=42% Similarity=1.359 Sum_probs=9.1
Q ss_pred Cccccccccccc
Q psy17547 101 KSMCLKLYCDCF 112 (186)
Q Consensus 101 ks~Clk~YC~Cf 112 (186)
+.+|+..+|+||
T Consensus 25 ng~c~ng~c~c~ 36 (36)
T d1j5ja_ 25 NGRCVNGFCDCF 36 (36)
T ss_dssp CEEEETTEEEEC
T ss_pred CCceeCCeeccC
Confidence 457888888887
No 10
>d1n8ma_ g.3.7.2 (A:) PI4, potassium channel blocking toxin 4 {Scorpion (Pandinus imperator) [TaxId: 55084]}
Probab=7.80 E-value=39 Score=19.22 Aligned_cols=14 Identities=36% Similarity=1.360 Sum_probs=11.5
Q ss_pred ccCCCccccccccC
Q psy17547 173 CKRSGCLKNYCECY 186 (186)
Q Consensus 173 CkkS~ClKkYCeCf 186 (186)
|..|+|..|-|-||
T Consensus 22 c~nakCiNk~CKCY 35 (38)
T d1n8ma_ 22 CPNAKCINKTCKCY 35 (38)
T ss_dssp SCCEEEETTEEEEC
T ss_pred CCchHHhhhcCcee
Confidence 56788888888887
Done!