Your job contains 1 sequence.
>psy17547
YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH
TKGCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQ
CNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLK
NYCECY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17547
(186 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6MZP7 - symbol:LIN54 "Protein lin-54 homolog" ... 460 5.0e-43 1
MGI|MGI:2140902 - symbol:Lin54 "lin-54 homolog (C. elegan... 460 5.0e-43 1
RGD|1311361 - symbol:Lin54 "lin-54 homolog (C. elegans)" ... 460 5.0e-43 1
ZFIN|ZDB-GENE-060929-440 - symbol:lin54 "lin-54 homolog" ... 450 7.3e-42 1
WB|WBGene00003037 - symbol:lin-54 species:6239 "Caenorhab... 400 3.0e-37 1
UNIPROTKB|Q95QD7 - symbol:lin-54 "Protein lin-54" species... 400 3.0e-37 1
FB|FBgn0033846 - symbol:mip120 "Myb-interacting protein 1... 388 7.2e-35 1
UNIPROTKB|Q9Y4I5 - symbol:MTL5 "Tesmin" species:9606 "Hom... 332 3.3e-33 2
UNIPROTKB|F1RY65 - symbol:MTL5 "Uncharacterized protein" ... 348 1.1e-31 1
UNIPROTKB|E2R7U4 - symbol:MTL5 "Uncharacterized protein" ... 343 5.1e-31 1
TAIR|locus:2061683 - symbol:AT2G20110 species:3702 "Arabi... 316 1.0e-27 1
MGI|MGI:1340029 - symbol:Mtl5 "metallothionein-like 5, te... 308 2.9e-27 1
RGD|1309788 - symbol:Mtl5 "metallothionein-like 5, testis... 308 2.9e-27 1
TAIR|locus:2119981 - symbol:AT4G29000 species:3702 "Arabi... 306 1.6e-26 1
TAIR|locus:2145294 - symbol:AT5G25790 species:3702 "Arabi... 295 7.2e-26 1
TAIR|locus:2094369 - symbol:TSO1 "CHINESE FOR 'UGLY'" spe... 246 1.1e-21 2
TAIR|locus:2094344 - symbol:SOL1 species:3702 "Arabidopsi... 256 4.3e-21 1
TAIR|locus:2093417 - symbol:AT3G16160 species:3702 "Arabi... 247 4.9e-21 1
TAIR|locus:2114825 - symbol:AT3G04850 species:3702 "Arabi... 234 1.1e-18 1
UNIPROTKB|F1MMT2 - symbol:LAMA2 "Uncharacterized protein"... 126 4.3e-05 1
UNIPROTKB|P24043 - symbol:LAMA2 "Laminin subunit alpha-2"... 123 0.00011 1
UNIPROTKB|Q22KY6 - symbol:TTHERM_01178680 "Neurohypophysi... 118 0.00040 1
ZFIN|ZDB-GENE-081030-4 - symbol:lamb2 "laminin, beta 2 (l... 114 0.00093 1
>UNIPROTKB|Q6MZP7 [details] [associations]
symbol:LIN54 "Protein lin-54 homolog" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] Reactome:REACT_115566 GO:GO:0005654
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0000278
eggNOG:NOG303998 InterPro:IPR005172 Pfam:PF03638 PROSITE:PS51634
CTD:132660 HOGENOM:HOG000082518 HOVERGEN:HBG108088
OrthoDB:EOG4M65H8 ChiTaRS:LIN54 EMBL:AB111889 EMBL:AK292769
EMBL:BX640657 EMBL:BX640966 EMBL:AC021105 EMBL:BC109277
EMBL:BC109278 IPI:IPI00655863 IPI:IPI00655989 IPI:IPI00789941
IPI:IPI00889131 IPI:IPI00900329 RefSeq:NP_001108479.1
RefSeq:NP_001108480.1 RefSeq:NP_919258.2 UniGene:Hs.96952
ProteinModelPortal:Q6MZP7 IntAct:Q6MZP7 MINT:MINT-7239317
STRING:Q6MZP7 PhosphoSite:Q6MZP7 DMDM:205611739 PaxDb:Q6MZP7
PRIDE:Q6MZP7 DNASU:132660 Ensembl:ENST00000340417
Ensembl:ENST00000395282 Ensembl:ENST00000395283
Ensembl:ENST00000442461 Ensembl:ENST00000446851
Ensembl:ENST00000505397 Ensembl:ENST00000506560
Ensembl:ENST00000508171 Ensembl:ENST00000510557 GeneID:132660
KEGG:hsa:132660 UCSC:uc003hnx.3 UCSC:uc003hny.3 UCSC:uc003hnz.3
UCSC:uc010ijt.2 GeneCards:GC04M083845 H-InvDB:HIX0024607
HGNC:HGNC:25397 MIM:613367 neXtProt:NX_Q6MZP7 PharmGKB:PA162394056
InParanoid:Q6MZP7 OMA:TGTPGIQ PhylomeDB:Q6MZP7 GenomeRNAi:132660
NextBio:83114 ArrayExpress:Q6MZP7 Bgee:Q6MZP7 CleanEx:HS_LIN54
Genevestigator:Q6MZP7 Uniprot:Q6MZP7
Length = 749
Score = 460 (167.0 bits), Expect = 5.0e-43, P = 5.0e-43
Identities = 73/95 (76%), Positives = 84/95 (88%)
Query: 92 RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
RPRKPCNCTKS+CLKLYCDCFANGEFC CNC +C+NN+EHE++R AI+ CL+RNP AF
Sbjct: 520 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 579
Query: 152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
+PKIGK GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct: 580 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 614
Score = 378 (138.1 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 60/81 (74%), Positives = 70/81 (86%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
YCDCFANGEFC CNC +C+NN+EHE++R AI+ CL+RNP AF+PKIGK GE +RRH
Sbjct: 536 YCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRRH 595
Query: 61 TKGCNCKRSGCLKNYCECYEA 81
+KGCNCKRSGCLKNYCECYEA
Sbjct: 596 SKGCNCKRSGCLKNYCECYEA 616
Score = 98 (39.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 92 RPRKPCNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFNNIEHEDDR 136
R K CNC +S CLK YC+C+ C C C C N E +R
Sbjct: 594 RHSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGC-KNFEESPER 638
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 55 EGERRHTKGCNCKRSGCLKNYCECYEAG 82
E R K CNC +S CLK YC+C+ G
Sbjct: 516 ESASRPRKPCNCTKSLCLKLYCDCFANG 543
>MGI|MGI:2140902 [details] [associations]
symbol:Lin54 "lin-54 homolog (C. elegans)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:2140902
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0007049 eggNOG:NOG303998 GeneTree:ENSGT00390000013974
InterPro:IPR005172 Pfam:PF03638 PROSITE:PS51634 CTD:132660
HOGENOM:HOG000082518 HOVERGEN:HBG108088 ChiTaRS:LIN54 OMA:TGTPGIQ
EMBL:AK220225 EMBL:AK028016 EMBL:AK029288 EMBL:AK134320
EMBL:BC106126 EMBL:BC125580 IPI:IPI00223922 IPI:IPI00751361
IPI:IPI00895977 RefSeq:NP_001108482.1 RefSeq:NP_766302.2
UniGene:Mm.212568 ProteinModelPortal:Q571G4 IntAct:Q571G4
STRING:Q571G4 PhosphoSite:Q571G4 PRIDE:Q571G4
Ensembl:ENSMUST00000046154 Ensembl:ENSMUST00000123572 GeneID:231506
KEGG:mmu:231506 UCSC:uc008yhn.2 UCSC:uc008yhq.2 InParanoid:Q571G4
NextBio:380584 Bgee:Q571G4 Genevestigator:Q571G4 Uniprot:Q571G4
Length = 749
Score = 460 (167.0 bits), Expect = 5.0e-43, P = 5.0e-43
Identities = 73/95 (76%), Positives = 84/95 (88%)
Query: 92 RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
RPRKPCNCTKS+CLKLYCDCFANGEFC CNC +C+NN+EHE++R AI+ CL+RNP AF
Sbjct: 520 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 579
Query: 152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
+PKIGK GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct: 580 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 614
Score = 378 (138.1 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 60/81 (74%), Positives = 70/81 (86%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
YCDCFANGEFC CNC +C+NN+EHE++R AI+ CL+RNP AF+PKIGK GE +RRH
Sbjct: 536 YCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRRH 595
Query: 61 TKGCNCKRSGCLKNYCECYEA 81
+KGCNCKRSGCLKNYCECYEA
Sbjct: 596 SKGCNCKRSGCLKNYCECYEA 616
Score = 98 (39.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 92 RPRKPCNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFNNIEHEDDR 136
R K CNC +S CLK YC+C+ C C C C N E +R
Sbjct: 594 RHSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGC-KNFEESPER 638
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 55 EGERRHTKGCNCKRSGCLKNYCECYEAG 82
E R K CNC +S CLK YC+C+ G
Sbjct: 516 ESTSRPRKPCNCTKSLCLKLYCDCFANG 543
>RGD|1311361 [details] [associations]
symbol:Lin54 "lin-54 homolog (C. elegans)" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
RGD:1311361 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0007049 eggNOG:NOG303998 GeneTree:ENSGT00390000013974
InterPro:IPR005172 Pfam:PF03638 PROSITE:PS51634 CTD:132660
HOGENOM:HOG000082518 HOVERGEN:HBG108088 OrthoDB:EOG4M65H8
OMA:TGTPGIQ EMBL:AABR03090456 EMBL:AABR03091900 EMBL:AABR03089973
EMBL:BC082043 EMBL:BC099076 IPI:IPI00471654 RefSeq:NP_001094034.1
UniGene:Rn.24111 STRING:Q641Z1 PhosphoSite:Q641Z1 PRIDE:Q641Z1
Ensembl:ENSRNOT00000003006 GeneID:305171 KEGG:rno:305171
InParanoid:Q641Z1 NextBio:654175 Genevestigator:Q641Z1
Uniprot:Q641Z1
Length = 749
Score = 460 (167.0 bits), Expect = 5.0e-43, P = 5.0e-43
Identities = 73/95 (76%), Positives = 84/95 (88%)
Query: 92 RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAF 151
RPRKPCNCTKS+CLKLYCDCFANGEFC CNC +C+NN+EHE++R AI+ CL+RNP AF
Sbjct: 520 RPRKPCNCTKSLCLKLYCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAF 579
Query: 152 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
+PKIGK GE +RRH+KGCNCKRSGCLKNYCECY
Sbjct: 580 KPKIGKGKEGESDRRHSKGCNCKRSGCLKNYCECY 614
Score = 378 (138.1 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 60/81 (74%), Positives = 70/81 (86%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
YCDCFANGEFC CNC +C+NN+EHE++R AI+ CL+RNP AF+PKIGK GE +RRH
Sbjct: 536 YCDCFANGEFCNNCNCTNCYNNLEHENERQKAIKACLDRNPEAFKPKIGKGKEGESDRRH 595
Query: 61 TKGCNCKRSGCLKNYCECYEA 81
+KGCNCKRSGCLKNYCECYEA
Sbjct: 596 SKGCNCKRSGCLKNYCECYEA 616
Score = 98 (39.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 19/46 (41%), Positives = 23/46 (50%)
Query: 92 RPRKPCNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFNNIEHEDDR 136
R K CNC +S CLK YC+C+ C C C C N E +R
Sbjct: 594 RHSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGC-KNFEESPER 638
Score = 81 (33.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 55 EGERRHTKGCNCKRSGCLKNYCECYEAG 82
E R K CNC +S CLK YC+C+ G
Sbjct: 516 ESASRPRKPCNCTKSLCLKLYCDCFANG 543
>ZFIN|ZDB-GENE-060929-440 [details] [associations]
symbol:lin54 "lin-54 homolog" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] ZFIN:ZDB-GENE-060929-440 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0007049 eggNOG:NOG303998
InterPro:IPR005172 Pfam:PF03638 PROSITE:PS51634 EMBL:BC124175
IPI:IPI00803420 RefSeq:NP_001070035.1 UniGene:Dr.107672
STRING:Q08CM4 PRIDE:Q08CM4 GeneID:560688 KEGG:dre:560688 CTD:132660
HOGENOM:HOG000082518 HOVERGEN:HBG108088 InParanoid:Q08CM4
OrthoDB:EOG4M65H8 NextBio:20883571 ArrayExpress:Q08CM4
Uniprot:Q08CM4
Length = 771
Score = 450 (163.5 bits), Expect = 7.3e-42, P = 7.3e-42
Identities = 75/105 (71%), Positives = 86/105 (81%)
Query: 82 GARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIR 141
G T E N RPRKPCNCT+S CLKLYCDCFANGEFC CNC +CFNN++HE +R AI+
Sbjct: 534 GLSTSEANS-RPRKPCNCTRSQCLKLYCDCFANGEFCNNCNCVNCFNNLDHESERLKAIK 592
Query: 142 QCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
CL+RNP AF+PKIGK GE +RRH+KGCNCK+SGCLKNYCECY
Sbjct: 593 ACLDRNPVAFKPKIGKGKEGESDRRHSKGCNCKKSGCLKNYCECY 637
Score = 365 (133.5 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 59/81 (72%), Positives = 69/81 (85%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
YCDCFANGEFC CNC +CFNN++HE +R AI+ CL+RNP AF+PKIGK GE +RRH
Sbjct: 559 YCDCFANGEFCNNCNCVNCFNNLDHESERLKAIKACLDRNPVAFKPKIGKGKEGESDRRH 618
Query: 61 TKGCNCKRSGCLKNYCECYEA 81
+KGCNCK+SGCLKNYCECYEA
Sbjct: 619 SKGCNCKKSGCLKNYCECYEA 639
>WB|WBGene00003037 [details] [associations]
symbol:lin-54 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0070176 "DRM complex" evidence=IDA] [GO:0030849
"autosome" evidence=IDA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IDA] GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0006355 GO:GO:0006351
GO:GO:0007049 GO:GO:0040035 GO:GO:0000794 GO:GO:0040027
GO:GO:0001046 GO:GO:0070176 EMBL:Z82274 PIR:T23152
RefSeq:NP_502544.1 RefSeq:NP_502545.1 ProteinModelPortal:Q95QD7
STRING:Q95QD7 PaxDb:Q95QD7 PRIDE:Q95QD7 EnsemblMetazoa:JC8.6a
GeneID:178280 KEGG:cel:CELE_JC8.6 UCSC:JC8.6a CTD:178280
WormBase:JC8.6a WormBase:JC8.6b eggNOG:NOG303998
GeneTree:ENSGT00390000013974 HOGENOM:HOG000016388 InParanoid:Q95QD7
OMA:CLEQMIT NextBio:900480 GO:GO:0030849 InterPro:IPR005172
Pfam:PF03638 PROSITE:PS51634 Uniprot:Q95QD7
Length = 435
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 69/95 (72%), Positives = 75/95 (78%)
Query: 94 RKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
RKPCNCTKS CLKLYCDCFANGEFC CNC C NNIE++ R AIRQ LERNPNAF+P
Sbjct: 174 RKPCNCTKSQCLKLYCDCFANGEFCRDCNCKDCHNNIEYDSQRSKAIRQSLERNPNAFKP 233
Query: 154 KIGKCLVG--EGERRHTKGCNCKRSGCLKNYCECY 186
KIG G + ER H KGC+CK+SGCLKNYCECY
Sbjct: 234 KIGIARGGITDIERLHQKGCHCKKSGCLKNYCECY 268
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 58/83 (69%), Positives = 64/83 (77%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVG--EGER 58
YCDCFANGEFC CNC C NNIE++ R AIRQ LERNPNAF+PKIG G + ER
Sbjct: 188 YCDCFANGEFCRDCNCKDCHNNIEYDSQRSKAIRQSLERNPNAFKPKIGIARGGITDIER 247
Query: 59 RHTKGCNCKRSGCLKNYCECYEA 81
H KGC+CK+SGCLKNYCECYEA
Sbjct: 248 LHQKGCHCKKSGCLKNYCECYEA 270
Score = 92 (37.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 94 RKPCNCTKSMCLKLYCDCFANGEFCY-QCNCNSCFNNIEHEDDRH 137
+K C+C KS CLK YC+C+ C +C C C N + R+
Sbjct: 250 QKGCHCKKSGCLKNYCECYEAKVPCTDRCKCKGCQNTETYRMTRY 294
Score = 83 (34.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 45 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECYEAG 82
R K K + G+R K CNC +S CLK YC+C+ G
Sbjct: 161 RLKTKKKVFAPGQR---KPCNCTKSQCLKLYCDCFANG 195
>UNIPROTKB|Q95QD7 [details] [associations]
symbol:lin-54 "Protein lin-54" species:6239 "Caenorhabditis
elegans" [GO:0070176 "DRM complex" evidence=IDA] GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0006355 GO:GO:0006351
GO:GO:0007049 GO:GO:0040035 GO:GO:0000794 GO:GO:0040027
GO:GO:0001046 GO:GO:0070176 EMBL:Z82274 PIR:T23152
RefSeq:NP_502544.1 RefSeq:NP_502545.1 ProteinModelPortal:Q95QD7
STRING:Q95QD7 PaxDb:Q95QD7 PRIDE:Q95QD7 EnsemblMetazoa:JC8.6a
GeneID:178280 KEGG:cel:CELE_JC8.6 UCSC:JC8.6a CTD:178280
WormBase:JC8.6a WormBase:JC8.6b eggNOG:NOG303998
GeneTree:ENSGT00390000013974 HOGENOM:HOG000016388 InParanoid:Q95QD7
OMA:CLEQMIT NextBio:900480 GO:GO:0030849 InterPro:IPR005172
Pfam:PF03638 PROSITE:PS51634 Uniprot:Q95QD7
Length = 435
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 69/95 (72%), Positives = 75/95 (78%)
Query: 94 RKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
RKPCNCTKS CLKLYCDCFANGEFC CNC C NNIE++ R AIRQ LERNPNAF+P
Sbjct: 174 RKPCNCTKSQCLKLYCDCFANGEFCRDCNCKDCHNNIEYDSQRSKAIRQSLERNPNAFKP 233
Query: 154 KIGKCLVG--EGERRHTKGCNCKRSGCLKNYCECY 186
KIG G + ER H KGC+CK+SGCLKNYCECY
Sbjct: 234 KIGIARGGITDIERLHQKGCHCKKSGCLKNYCECY 268
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 58/83 (69%), Positives = 64/83 (77%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVG--EGER 58
YCDCFANGEFC CNC C NNIE++ R AIRQ LERNPNAF+PKIG G + ER
Sbjct: 188 YCDCFANGEFCRDCNCKDCHNNIEYDSQRSKAIRQSLERNPNAFKPKIGIARGGITDIER 247
Query: 59 RHTKGCNCKRSGCLKNYCECYEA 81
H KGC+CK+SGCLKNYCECYEA
Sbjct: 248 LHQKGCHCKKSGCLKNYCECYEA 270
Score = 92 (37.4 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 94 RKPCNCTKSMCLKLYCDCFANGEFCY-QCNCNSCFNNIEHEDDRH 137
+K C+C KS CLK YC+C+ C +C C C N + R+
Sbjct: 250 QKGCHCKKSGCLKNYCECYEAKVPCTDRCKCKGCQNTETYRMTRY 294
Score = 83 (34.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 45 RPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECYEAG 82
R K K + G+R K CNC +S CLK YC+C+ G
Sbjct: 161 RLKTKKKVFAPGQR---KPCNCTKSQCLKLYCDCFANG 195
>FB|FBgn0033846 [details] [associations]
symbol:mip120 "Myb-interacting protein 120" species:7227
"Drosophila melanogaster" [GO:0003677 "DNA binding" evidence=IDA]
[GO:0007307 "eggshell chorion gene amplification" evidence=IC]
[GO:0031523 "Myb complex" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0030317 "sperm motility" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] EMBL:AE013599 GO:GO:0005634
GO:GO:0008340 GO:GO:0003677 GO:GO:0000785 GO:GO:0006351
GO:GO:0000122 GO:GO:0007049 GO:GO:0030317 GO:GO:0005700
GO:GO:0031523 GO:GO:0007307 eggNOG:NOG303998
GeneTree:ENSGT00390000013974 InterPro:IPR005172 Pfam:PF03638
PROSITE:PS51634 EMBL:BT021272 RefSeq:NP_610879.1 UniGene:Dm.33814
IntAct:A1Z9E2 STRING:A1Z9E2 PaxDb:A1Z9E2 PRIDE:A1Z9E2
EnsemblMetazoa:FBtr0087669 GeneID:36499 KEGG:dme:Dmel_CG6061
CTD:36499 FlyBase:FBgn0033846 InParanoid:A1Z9E2 OrthoDB:EOG4QJQ3F
PhylomeDB:A1Z9E2 ChiTaRS:LIN54 GenomeRNAi:36499 NextBio:798884
Bgee:A1Z9E2 Uniprot:A1Z9E2
Length = 950
Score = 388 (141.6 bits), Expect = 7.2e-35, P = 7.2e-35
Identities = 68/108 (62%), Positives = 79/108 (73%)
Query: 81 AGARTLEPNG--IRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHH 138
A A ++P G RK CNC+KS CLKLYCDCFANGEFC C C CFNN+++E +R
Sbjct: 723 AAAGAVDPLGGMTSRRKHCNCSKSQCLKLYCDCFANGEFCQDCTCKDCFNNLDYEVERER 782
Query: 139 AIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECY 186
AIR CL+RNP+AF+PKI G+ R H KGCNCKRSGCLKNYCECY
Sbjct: 783 AIRSCLDRNPSAFKPKITAPNSGD-MRLHNKGCNCKRSGCLKNYCECY 829
Score = 329 (120.9 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 55/81 (67%), Positives = 63/81 (77%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
YCDCFANGEFC C C CFNN+++E +R AIR CL+RNP+AF+PKI G+ R H
Sbjct: 752 YCDCFANGEFCQDCTCKDCFNNLDYEVERERAIRSCLDRNPSAFKPKITAPNSGD-MRLH 810
Query: 61 TKGCNCKRSGCLKNYCECYEA 81
KGCNCKRSGCLKNYCECYEA
Sbjct: 811 NKGCNCKRSGCLKNYCECYEA 831
>UNIPROTKB|Q9Y4I5 [details] [associations]
symbol:MTL5 "Tesmin" species:9606 "Homo sapiens"
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=NAS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=NAS] [GO:0010038 "response to metal ion"
evidence=NAS] [GO:0006875 "cellular metal ion homeostasis"
evidence=NAS] GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0046872 EMBL:CH471076 GO:GO:0007283
GO:GO:0010038 GO:GO:0006875 eggNOG:NOG303998 InterPro:IPR005172
Pfam:PF03638 PROSITE:PS51634 EMBL:AK074817 EMBL:AK292358
EMBL:BC027593 EMBL:BC064579 EMBL:U86074 IPI:IPI00007395
IPI:IPI00738914 IPI:IPI00903174 RefSeq:NP_001034745.1
RefSeq:NP_004914.2 UniGene:Hs.145932 ProteinModelPortal:Q9Y4I5
STRING:Q9Y4I5 PhosphoSite:Q9Y4I5 DMDM:205371773 PaxDb:Q9Y4I5
PRIDE:Q9Y4I5 Ensembl:ENST00000255087 Ensembl:ENST00000443940
Ensembl:ENST00000544963 GeneID:9633 KEGG:hsa:9633 UCSC:uc001ooc.3
UCSC:uc009ysi.1 CTD:9633 GeneCards:GC11M068474 H-InvDB:HIX0026150
HGNC:HGNC:7446 HPA:HPA018539 MIM:604374 neXtProt:NX_Q9Y4I5
PharmGKB:PA31249 HOGENOM:HOG000082453 HOVERGEN:HBG108153
InParanoid:Q9Y4I5 OMA:ILHTEFK OrthoDB:EOG4ZKJM3 PhylomeDB:Q9Y4I5
GenomeRNAi:9633 NextBio:36155 Bgee:Q9Y4I5 CleanEx:HS_MTL5
Genevestigator:Q9Y4I5 GermOnline:ENSG00000132749 Uniprot:Q9Y4I5
Length = 508
Score = 332 (121.9 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 53/81 (65%), Positives = 65/81 (80%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
YCDCFA+G+FC CNCN+C NN+ H+ +R AI+ CL RNP AF+PKIGK +G + +H
Sbjct: 307 YCDCFASGDFCNNCNCNNCCNNLHHDIERFKAIKACLGRNPEAFQPKIGKGQLGNVKPQH 366
Query: 61 TKGCNCKRSGCLKNYCECYEA 81
KGCNC+RSGCLKNYCECYEA
Sbjct: 367 NKGCNCRRSGCLKNYCECYEA 387
Score = 323 (118.8 bits), Expect = 9.2e-29, P = 9.2e-29
Identities = 51/79 (64%), Positives = 63/79 (79%)
Query: 108 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 167
YCDCFA+G+FC CNCN+C NN+ H+ +R AI+ CL RNP AF+PKIGK +G + +H
Sbjct: 307 YCDCFASGDFCNNCNCNNCCNNLHHDIERFKAIKACLGRNPEAFQPKIGKGQLGNVKPQH 366
Query: 168 TKGCNCKRSGCLKNYCECY 186
KGCNC+RSGCLKNYCECY
Sbjct: 367 NKGCNCRRSGCLKNYCECY 385
Score = 50 (22.7 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 88 PNGIRPRKPCNCTKSMCLKLYCDCF-ANGEFCYQCNCNSC 126
P R+P +C ++ C C A GE + +C+ C
Sbjct: 439 PRFSHDRRPSSCISWEVVEATCACLLAQGEEAEKEHCSKC 478
>UNIPROTKB|F1RY65 [details] [associations]
symbol:MTL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] GO:GO:0005634 GO:GO:0005737
GeneTree:ENSGT00390000013974 InterPro:IPR005172 Pfam:PF03638
PROSITE:PS51634 CTD:9633 OMA:ILHTEFK EMBL:CU694772 EMBL:CU694814
RefSeq:XP_003122474.1 Ensembl:ENSSSCT00000014082 GeneID:100520538
KEGG:ssc:100520538 Uniprot:F1RY65
Length = 511
Score = 348 (127.6 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 56/81 (69%), Positives = 67/81 (82%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
YCDCFA+G+FC CNCN+C NN+ HE +R AI+ CL+RNP AF+PKIGK +G+ + RH
Sbjct: 310 YCDCFASGDFCNNCNCNNCCNNLRHEIERFKAIKACLDRNPEAFQPKIGKGKLGDVKPRH 369
Query: 61 TKGCNCKRSGCLKNYCECYEA 81
KGCNCKRSGCLKNYCECYEA
Sbjct: 370 NKGCNCKRSGCLKNYCECYEA 390
Score = 339 (124.4 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 54/79 (68%), Positives = 65/79 (82%)
Query: 108 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 167
YCDCFA+G+FC CNCN+C NN+ HE +R AI+ CL+RNP AF+PKIGK +G+ + RH
Sbjct: 310 YCDCFASGDFCNNCNCNNCCNNLRHEIERFKAIKACLDRNPEAFQPKIGKGKLGDVKPRH 369
Query: 168 TKGCNCKRSGCLKNYCECY 186
KGCNCKRSGCLKNYCECY
Sbjct: 370 NKGCNCKRSGCLKNYCECY 388
>UNIPROTKB|E2R7U4 [details] [associations]
symbol:MTL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0005737
GeneTree:ENSGT00390000013974 InterPro:IPR005172 Pfam:PF03638
PROSITE:PS51634 CTD:9633 OMA:ILHTEFK EMBL:AAEX03011604
EMBL:AAEX03011603 RefSeq:XP_854573.2 Ensembl:ENSCAFT00000017130
GeneID:611767 KEGG:cfa:611767 NextBio:20897303 Uniprot:E2R7U4
Length = 516
Score = 343 (125.8 bits), Expect = 5.1e-31, P = 5.1e-31
Identities = 55/81 (67%), Positives = 66/81 (81%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
YCDCFA+G+FC CNCN+C NN+ HE R AI+ CL+RNP AF+PKIGK +G+ + RH
Sbjct: 315 YCDCFASGDFCNNCNCNNCCNNLHHEIQRFKAIKACLDRNPEAFQPKIGKGKLGDVKPRH 374
Query: 61 TKGCNCKRSGCLKNYCECYEA 81
KGCNC+RSGCLKNYCECYEA
Sbjct: 375 NKGCNCRRSGCLKNYCECYEA 395
Score = 334 (122.6 bits), Expect = 5.6e-30, P = 5.6e-30
Identities = 53/79 (67%), Positives = 64/79 (81%)
Query: 108 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 167
YCDCFA+G+FC CNCN+C NN+ HE R AI+ CL+RNP AF+PKIGK +G+ + RH
Sbjct: 315 YCDCFASGDFCNNCNCNNCCNNLHHEIQRFKAIKACLDRNPEAFQPKIGKGKLGDVKPRH 374
Query: 168 TKGCNCKRSGCLKNYCECY 186
KGCNC+RSGCLKNYCECY
Sbjct: 375 NKGCNCRRSGCLKNYCECY 393
>TAIR|locus:2061683 [details] [associations]
symbol:AT2G20110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
GO:GO:0007275 GO:GO:0005634 EMBL:CP002685 GO:GO:0046872
EMBL:AC006081 eggNOG:NOG303998 InterPro:IPR005172 Pfam:PF03638
PROSITE:PS51634 HOGENOM:HOG000082876 ProtClustDB:CLSN2683302
EMBL:AB493556 EMBL:AY163773 EMBL:AY163774 EMBL:AY163775
IPI:IPI00545812 IPI:IPI00547315 PIR:B84585 RefSeq:NP_179601.1
RefSeq:NP_849995.1 UniGene:At.39743 IntAct:Q9SL70 PRIDE:Q9SL70
EnsemblPlants:AT2G20110.1 GeneID:816530 KEGG:ath:AT2G20110
TAIR:At2g20110 InParanoid:Q9SL70 OMA:NNVENEP PhylomeDB:Q9SL70
ArrayExpress:Q9SL70 Genevestigator:Q9SL70 Uniprot:Q9SL70
Length = 571
Score = 316 (116.3 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 56/104 (53%), Positives = 68/104 (65%)
Query: 94 RKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
+K CNC S CLKLYC+CFA+G +C CNC +CFNN+E+E R A+ LERNPNAFRP
Sbjct: 118 KKQCNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVENEPARRQAVESTLERNPNAFRP 177
Query: 154 KIGKCLVGEGERR-----------HTKGCNCKRSGCLKNYCECY 186
KI G + R H KGC+CK+SGCLK YCEC+
Sbjct: 178 KIAASPHGGRDNREEVGDVVMLARHNKGCHCKKSGCLKKYCECF 221
Score = 269 (99.8 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 48/92 (52%), Positives = 60/92 (65%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERR- 59
YC+CFA+G +C CNC +CFNN+E+E R A+ LERNPNAFRPKI G + R
Sbjct: 132 YCECFASGTYCDGCNCVNCFNNVENEPARRQAVESTLERNPNAFRPKIAASPHGGRDNRE 191
Query: 60 ----------HTKGCNCKRSGCLKNYCECYEA 81
H KGC+CK+SGCLK YCEC++A
Sbjct: 192 EVGDVVMLARHNKGCHCKKSGCLKKYCECFQA 223
Score = 103 (41.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 30 HHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCECYEAG 82
H IR +PN+ G+ G +++ K CNCK S CLK YCEC+ +G
Sbjct: 89 HVPIRHPRPESPNSMPRPAGETRDGTPQKK--KQCNCKHSRCLKLYCECFASG 139
Score = 101 (40.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 92 RPRKPCNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFNNIEHEDDR 136
R K C+C KS CLK YC+CF C + C C C N E + R
Sbjct: 201 RHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDC-KNFEGSEVR 245
>MGI|MGI:1340029 [details] [associations]
symbol:Mtl5 "metallothionein-like 5, testis-specific
(tesmin)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030154 "cell differentiation" evidence=IEA]
MGI:MGI:1340029 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 eggNOG:NOG303998
GeneTree:ENSGT00390000013974 InterPro:IPR005172 Pfam:PF03638
PROSITE:PS51634 CTD:9633 HOGENOM:HOG000082453 HOVERGEN:HBG108153
OMA:ILHTEFK OrthoDB:EOG4ZKJM3 EMBL:U67176 EMBL:U77383 EMBL:AB057423
EMBL:AB057422 EMBL:AF329359 EMBL:AF329360 EMBL:BC024377
IPI:IPI00270146 IPI:IPI00903397 RefSeq:NP_001034746.1
UniGene:Mm.209941 STRING:Q9WTJ6 PhosphoSite:Q9WTJ6 PRIDE:Q9WTJ6
Ensembl:ENSMUST00000025840 Ensembl:ENSMUST00000127142
Ensembl:ENSMUST00000142193 GeneID:17771 KEGG:mmu:17771
InParanoid:Q9WTJ6 NextBio:292485 Bgee:Q9WTJ6 CleanEx:MM_MTL5
Genevestigator:Q9WTJ6 GermOnline:ENSMUSG00000024905 Uniprot:Q9WTJ6
Length = 475
Score = 308 (113.5 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 51/81 (62%), Positives = 64/81 (79%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
YCDCF++G+FC C+CN N+ HE +R AI+ CL+RNP AF+PK+GK +G + RH
Sbjct: 278 YCDCFSSGDFCNSCSCN----NLRHELERFKAIKACLDRNPEAFQPKMGKGRLGAAKLRH 333
Query: 61 TKGCNCKRSGCLKNYCECYEA 81
+KGCNCKRSGCLKNYCECYEA
Sbjct: 334 SKGCNCKRSGCLKNYCECYEA 354
Score = 299 (110.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 49/79 (62%), Positives = 62/79 (78%)
Query: 108 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 167
YCDCF++G+FC C+CN N+ HE +R AI+ CL+RNP AF+PK+GK +G + RH
Sbjct: 278 YCDCFSSGDFCNSCSCN----NLRHELERFKAIKACLDRNPEAFQPKMGKGRLGAAKLRH 333
Query: 168 TKGCNCKRSGCLKNYCECY 186
+KGCNCKRSGCLKNYCECY
Sbjct: 334 SKGCNCKRSGCLKNYCECY 352
>RGD|1309788 [details] [associations]
symbol:Mtl5 "metallothionein-like 5, testis-specific (tesmin)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030154 "cell differentiation" evidence=IEA] RGD:1309788
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 eggNOG:NOG303998 GeneTree:ENSGT00390000013974
InterPro:IPR005172 Pfam:PF03638 PROSITE:PS51634 CTD:9633
HOGENOM:HOG000082453 HOVERGEN:HBG108153 OrthoDB:EOG4ZKJM3
EMBL:BC083920 IPI:IPI00360402 RefSeq:NP_001012069.2
UniGene:Rn.105169 PRIDE:Q5XHX9 Ensembl:ENSRNOT00000019861
GeneID:309142 KEGG:rno:309142 UCSC:RGD:1309788 InParanoid:Q5XHX9
NextBio:660236 Genevestigator:Q5XHX9 Uniprot:Q5XHX9
Length = 475
Score = 308 (113.5 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 51/81 (62%), Positives = 64/81 (79%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 60
YCDCF++G+FC C+CN N+ HE +R AI+ CL+RNP AF+PK+GK +G + RH
Sbjct: 278 YCDCFSSGDFCNSCSCN----NLRHELERFKAIKACLDRNPEAFQPKMGKGRLGAAKLRH 333
Query: 61 TKGCNCKRSGCLKNYCECYEA 81
+KGCNCKRSGCLKNYCECYEA
Sbjct: 334 SKGCNCKRSGCLKNYCECYEA 354
Score = 299 (110.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 49/79 (62%), Positives = 62/79 (78%)
Query: 108 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 167
YCDCF++G+FC C+CN N+ HE +R AI+ CL+RNP AF+PK+GK +G + RH
Sbjct: 278 YCDCFSSGDFCNSCSCN----NLRHELERFKAIKACLDRNPEAFQPKMGKGRLGAAKLRH 333
Query: 168 TKGCNCKRSGCLKNYCECY 186
+KGCNCKRSGCLKNYCECY
Sbjct: 334 SKGCNCKRSGCLKNYCECY 352
>TAIR|locus:2119981 [details] [associations]
symbol:AT4G29000 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL078470 EMBL:AL161574 GO:GO:0046872
GO:GO:0003700 UniGene:At.3404 UniGene:At.48915 eggNOG:NOG303998
InterPro:IPR005172 Pfam:PF03638 PROSITE:PS51634 EMBL:AK118658
EMBL:BT005931 IPI:IPI00545785 PIR:T08955 RefSeq:NP_194629.1
PaxDb:Q9SZD1 PRIDE:Q9SZD1 EnsemblPlants:AT4G29000.1 GeneID:829021
KEGG:ath:AT4G29000 TAIR:At4g29000 HOGENOM:HOG000082876
InParanoid:Q9SZD1 OMA:KRNEIEN PhylomeDB:Q9SZD1
ProtClustDB:CLSN2683302 Genevestigator:Q9SZD1 Uniprot:Q9SZD1
Length = 603
Score = 306 (112.8 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 54/104 (51%), Positives = 68/104 (65%)
Query: 94 RKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
+K CNC S CLKLYC+CFA+G +C CNC +CFNN+++E R A+ LERNP AFRP
Sbjct: 131 KKQCNCKHSRCLKLYCECFASGTYCDGCNCVNCFNNVDNEPARREAVEATLERNPFAFRP 190
Query: 154 KIGKCLVGEGERR-----------HTKGCNCKRSGCLKNYCECY 186
KI G ++R H KGC+CK+SGCLK YCEC+
Sbjct: 191 KIASSPHGGRDKREDIGEVVLLGKHNKGCHCKKSGCLKKYCECF 234
Score = 259 (96.2 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 46/92 (50%), Positives = 60/92 (65%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERR- 59
YC+CFA+G +C CNC +CFNN+++E R A+ LERNP AFRPKI G ++R
Sbjct: 145 YCECFASGTYCDGCNCVNCFNNVDNEPARREAVEATLERNPFAFRPKIASSPHGGRDKRE 204
Query: 60 ----------HTKGCNCKRSGCLKNYCECYEA 81
H KGC+CK+SGCLK YCEC++A
Sbjct: 205 DIGEVVLLGKHNKGCHCKKSGCLKKYCECFQA 236
Score = 103 (41.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 95 KPCNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFNNIEHEDDR 136
K C+C KS CLK YC+CF C + C C C N E ++R
Sbjct: 217 KGCHCKKSGCLKKYCECFQANILCSENCKCLDC-KNFEGSEER 258
Score = 97 (39.2 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 33 IRQCLERNPNAFRPKIGKCLVG-EGERRHTKGCNCKRSGCLKNYCECYEAG 82
IR + +P A P+ + G +G + K CNCK S CLK YCEC+ +G
Sbjct: 104 IRHPIPESPKARGPRPN--VEGRDGTPQKKKQCNCKHSRCLKLYCECFASG 152
>TAIR|locus:2145294 [details] [associations]
symbol:AT5G25790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GO:GO:0046872
GO:GO:0003700 EMBL:AC005405 InterPro:IPR005172 Pfam:PF03638
PROSITE:PS51634 EMBL:BX830951 IPI:IPI00541375 RefSeq:NP_197951.2
UniGene:At.50483 EnsemblPlants:AT5G25790.1 GeneID:832648
KEGG:ath:AT5G25790 TAIR:At5g25790 PhylomeDB:F4JY84 Uniprot:F4JY84
Length = 459
Score = 295 (108.9 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 56/118 (47%), Positives = 75/118 (63%)
Query: 80 EAGARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRHHA 139
E ++ PN + +K CNC S CLKLYC+CFA+G +C CNC +C N +E+E R A
Sbjct: 82 EVESKENTPN--KQQKHCNCKNSKCLKLYCECFASGSYCNGCNCVNCHNKLENESSRQVA 139
Query: 140 IRQCLERNPNAFRPKIG------KCLVGEGER-----RHTKGCNCKRSGCLKNYCECY 186
I LERNP+AF+PKI K L ++ +H+KGC+C++SGCLK YCECY
Sbjct: 140 ISGILERNPDAFKPKIAGSPHGMKDLQENVQQVLLIGKHSKGCHCRKSGCLKKYCECY 197
Score = 245 (91.3 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 45/92 (48%), Positives = 61/92 (66%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIG------KCLVG 54
YC+CFA+G +C CNC +C N +E+E R AI LERNP+AF+PKI K L
Sbjct: 108 YCECFASGSYCNGCNCVNCHNKLENESSRQVAISGILERNPDAFKPKIAGSPHGMKDLQE 167
Query: 55 EGER-----RHTKGCNCKRSGCLKNYCECYEA 81
++ +H+KGC+C++SGCLK YCECY+A
Sbjct: 168 NVQQVLLIGKHSKGCHCRKSGCLKKYCECYQA 199
Score = 103 (41.3 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 95 KPCNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFNNIEHEDDR 136
K C+C KS CLK YC+C+ C + C C C N E ++R
Sbjct: 180 KGCHCRKSGCLKKYCECYQANILCSENCRCQDC-KNFEGSEER 221
Score = 91 (37.1 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 59 RHTKGCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNC 99
+ K CNCK S CLK YCEC+ +G+ NG CNC
Sbjct: 92 KQQKHCNCKNSKCLKLYCECFASGSYC---NG------CNC 123
Score = 44 (20.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 21/86 (24%), Positives = 32/86 (37%)
Query: 21 NNIEHED---DRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCNCKRSGCLKNYCE 77
N + ++D R H + E PN + K C + + + C C SG N C
Sbjct: 67 NRVSNQDPSTSRRHNEVESKENTPNK-QQKHCNCKNSKCLKLY---CECFASGSYCNGCN 122
Query: 78 CYEA-------GARTLEPNGIRPRKP 96
C +R + +GI R P
Sbjct: 123 CVNCHNKLENESSRQVAISGILERNP 148
>TAIR|locus:2094369 [details] [associations]
symbol:TSO1 "CHINESE FOR 'UGLY'" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0009934 "regulation of meristem structural organization"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006310 "DNA recombination" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007020 "microtubule nucleation" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0008356 "asymmetric cell division"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0016458 "gene silencing" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0032204
"regulation of telomere maintenance" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] [GO:0043247 "telomere
maintenance in response to DNA damage" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] [GO:0051225 "spindle
assembly" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=IMP] [GO:0051302 "regulation of cell division"
evidence=IMP] GO:GO:0005634 EMBL:CP002686 GO:GO:0046872
GO:GO:0003700 GO:GO:0009934 GO:GO:0051302 GO:GO:0048444
EMBL:AB022223 InterPro:IPR005172 Pfam:PF03638 PROSITE:PS51634
HOGENOM:HOG000084455 EMBL:AF206324 EMBL:AF204059 EMBL:AY046019
EMBL:AY142642 IPI:IPI00522114 RefSeq:NP_566718.2 UniGene:At.24953
UniGene:At.68193 STRING:Q9LUI3 PRIDE:Q9LUI3
EnsemblPlants:AT3G22780.1 GeneID:821849 KEGG:ath:AT3G22780
TAIR:At3g22780 eggNOG:NOG258818 InParanoid:Q9LUI3 OMA:LVIMESK
PhylomeDB:Q9LUI3 ProtClustDB:CLSN2918188 Genevestigator:Q9LUI3
Uniprot:Q9LUI3
Length = 695
Score = 246 (91.7 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 47/104 (45%), Positives = 60/104 (57%)
Query: 95 KPCNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
K CNC KS CLKLYC+CFA G +C + C+C CFN HE+ +Q RNP AF P
Sbjct: 401 KRCNCKKSKCLKLYCECFAAGVYCIEPCSCIDCFNKPIHEETVLATRKQIESRNPLAFAP 460
Query: 154 KI---GKCLVGEGE--------RRHTKGCNCKRSGCLKNYCECY 186
K+ ++ + RH +GCNCK+S C+K YCECY
Sbjct: 461 KVIRNADSIMEASDDASKTPASARHKRGCNCKKSNCMKKYCECY 504
Score = 198 (74.8 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 38/94 (40%), Positives = 52/94 (55%)
Query: 1 YCDCFANGEFCYQ-CNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKI---GKCLVGEG 56
YC+CFA G +C + C+C CFN HE+ +Q RNP AF PK+ ++
Sbjct: 414 YCECFAAGVYCIEPCSCIDCFNKPIHEETVLATRKQIESRNPLAFAPKVIRNADSIMEAS 473
Query: 57 E--------RRHTKGCNCKRSGCLKNYCECYEAG 82
+ RH +GCNCK+S C+K YCECY+ G
Sbjct: 474 DDASKTPASARHKRGCNCKKSNCMKKYCECYQGG 507
Score = 129 (50.5 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 25/72 (34%), Positives = 34/72 (47%)
Query: 88 PNGIRPRKPCNCTKSMCLKLYCDCFANGEFC-YQCNCNSCFNNIEHEDDRHHAIRQC-LE 145
P R ++ CNC KS C+K YC+C+ G C C C C N +D I + LE
Sbjct: 480 PASARHKRGCNCKKSNCMKKYCECYQGGVGCSMNCRCEGCTNVFGRKDGSLLVIMESKLE 539
Query: 146 RNPNAFRPKIGK 157
N + +I K
Sbjct: 540 ENQETYEKRIAK 551
Score = 118 (46.6 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 38 ERNPNAFRPKIGKC-LVGEGERRHTKGCNCKRSGCLKNYCECYEAGARTLEP 88
E N + + K+ K GEGE K CNCK+S CLK YCEC+ AG +EP
Sbjct: 378 ELNLGSLKKKMRKSEQAGEGES--CKRCNCKKSKCLKLYCECFAAGVYCIEP 427
Score = 41 (19.5 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 8 GEFCYQCNC 16
GE C +CNC
Sbjct: 397 GESCKRCNC 405
>TAIR|locus:2094344 [details] [associations]
symbol:SOL1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0001708 "cell fate specification" evidence=RCA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0042127
"regulation of cell proliferation" evidence=RCA] GO:GO:0007275
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003700 EMBL:AB022223 InterPro:IPR005172 Pfam:PF03638
PROSITE:PS51634 EMBL:AF205142 EMBL:AY099653 EMBL:AY128837
IPI:IPI00526760 RefSeq:NP_566717.1 UniGene:At.6307 PaxDb:Q8L548
PRIDE:Q8L548 EnsemblPlants:AT3G22760.1 GeneID:821847
KEGG:ath:AT3G22760 TAIR:At3g22760 eggNOG:NOG259583
HOGENOM:HOG000084455 InParanoid:Q8L548 OMA:EENETSG PhylomeDB:Q8L548
ProtClustDB:CLSN2688675 Genevestigator:Q8L548 Uniprot:Q8L548
Length = 609
Score = 256 (95.2 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 50/104 (48%), Positives = 62/104 (59%)
Query: 95 KPCNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
K CNC KS CLKLYC+CFA G +C + C+C +CFN H+D +Q RNP AF P
Sbjct: 328 KRCNCKKSKCLKLYCECFAAGFYCIEPCSCINCFNKPIHKDVVLATRKQIESRNPLAFAP 387
Query: 154 KI---GKCLVGEGE--------RRHTKGCNCKRSGCLKNYCECY 186
K+ ++ GE RH +GCNCK+S CLK YCECY
Sbjct: 388 KVIRNSDSIIEVGEDASKTPASARHKRGCNCKKSNCLKKYCECY 431
Score = 208 (78.3 bits), Expect = 6.6e-16, P = 6.6e-16
Identities = 41/94 (43%), Positives = 54/94 (57%)
Query: 1 YCDCFANGEFCYQ-CNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKI---GKCLVGEG 56
YC+CFA G +C + C+C +CFN H+D +Q RNP AF PK+ ++ G
Sbjct: 341 YCECFAAGFYCIEPCSCINCFNKPIHKDVVLATRKQIESRNPLAFAPKVIRNSDSIIEVG 400
Query: 57 E--------RRHTKGCNCKRSGCLKNYCECYEAG 82
E RH +GCNCK+S CLK YCECY+ G
Sbjct: 401 EDASKTPASARHKRGCNCKKSNCLKKYCECYQGG 434
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/131 (29%), Positives = 52/131 (39%)
Query: 11 CYQCNC--NSCFN-NIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRHTKGCN-- 65
C +CNC + C E + I C N F I K +V R+ + N
Sbjct: 327 CKRCNCKKSKCLKLYCECFAAGFYCIEPC--SCINCFNKPIHKDVV-LATRKQIESRNPL 383
Query: 66 CKRSGCLKNYCECYEAGARTLE-PNGIRPRKPCNCTKSMCLKLYCDCFANGEFC-YQCNC 123
++N E G + P R ++ CNC KS CLK YC+C+ G C C C
Sbjct: 384 AFAPKVIRNSDSIIEVGEDASKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSINCRC 443
Query: 124 NSCFNNIEHED 134
C N +D
Sbjct: 444 EGCKNAFGRKD 454
Score = 111 (44.1 bits), Expect = 0.00061, P = 0.00061
Identities = 38/136 (27%), Positives = 56/136 (41%)
Query: 54 GEGERRHTKGCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYCDC-F 112
GEG+ K CNCK+S CLK YCEC+ AG +EP C+C ++ D
Sbjct: 321 GEGDSS-CKRCNCKKSKCLKLYCECFAAGFYCIEP--------CSCINCFNKPIHKDVVL 371
Query: 113 ANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIG-KCLVGEGERRHTKGC 171
A + N + + D + + + P + R K G C +++ C
Sbjct: 372 ATRKQIESRNPLAFAPKVIRNSDSIIEVGEDASKTPASARHKRGCNCKKSNCLKKY---C 428
Query: 172 NCKRSG--CLKNYCEC 185
C + G C N C C
Sbjct: 429 ECYQGGVGCSIN-CRC 443
>TAIR|locus:2093417 [details] [associations]
symbol:AT3G16160 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
GO:GO:0007275 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 EMBL:AB012247 GO:GO:0003700 InterPro:IPR005172
Pfam:PF03638 PROSITE:PS51634 EMBL:AJ630495 EMBL:AY568667
EMBL:DQ653089 IPI:IPI00546987 IPI:IPI00657448 RefSeq:NP_188237.2
UniGene:At.50188 PRIDE:Q700D0 EnsemblPlants:AT3G16160.1
GeneID:820861 KEGG:ath:AT3G16160 TAIR:At3g16160 eggNOG:NOG325651
HOGENOM:HOG000202280 InParanoid:Q700D0 OMA:CKCINCK PhylomeDB:Q700D0
ProtClustDB:CLSN2918819 ArrayExpress:Q700D0 Genevestigator:Q700D0
Uniprot:Q700D0
Length = 368
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 54/117 (46%), Positives = 66/117 (56%)
Query: 80 EAGARTLEPNGI--RPRKPCNCTKSMCLKLYCDCFANGEFCYQCNCNSCFNNIEHEDDRH 137
EA +T E GI R K C C +S CLKLYCDCFA+G C C+C C NN E D R
Sbjct: 50 EAKDKTDE-EGITSRKHKGCRCKQSKCLKLYCDCFASGVVCTDCDCVDCHNNSEKCDARE 108
Query: 138 HAIRQCLERNPNAFRPK-IG-----KCLVGEGERRH--TKGCNCKRSGCLKNYCECY 186
A+ L RNPNAF K +G +C + ++GC CKR+ CLK YCEC+
Sbjct: 109 AAMVNVLGRNPNAFSEKALGSLTDNQCKAAPDTKPGLLSRGCKCKRTRCLKKYCECF 165
Score = 200 (75.5 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 40/89 (44%), Positives = 51/89 (57%)
Query: 1 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPK-IG-----KCLVG 54
YCDCFA+G C C+C C NN E D R A+ L RNPNAF K +G +C
Sbjct: 79 YCDCFASGVVCTDCDCVDCHNNSEKCDAREAAMVNVLGRNPNAFSEKALGSLTDNQCKAA 138
Query: 55 EGERRH--TKGCNCKRSGCLKNYCECYEA 81
+ ++GC CKR+ CLK YCEC++A
Sbjct: 139 PDTKPGLLSRGCKCKRTRCLKKYCECFQA 167
Score = 95 (38.5 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 54 GEGERRHTKGCNCKRSGCLKNYCECYEAG 82
G R+H KGC CK+S CLK YC+C+ +G
Sbjct: 59 GITSRKH-KGCRCKQSKCLKLYCDCFASG 86
Score = 88 (36.0 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 97 CNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFN 128
C C ++ CLK YC+CF C C C +C N
Sbjct: 150 CKCKRTRCLKKYCECFQANLLCSDNCKCINCKN 182
>TAIR|locus:2114825 [details] [associations]
symbol:AT3G04850 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] GO:GO:0007275 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003700 EMBL:AC009465
InterPro:IPR005172 Pfam:PF03638 PROSITE:PS51634 EMBL:BT003926
EMBL:BT005010 IPI:IPI00545115 RefSeq:NP_187136.3 UniGene:At.40769
EnsemblPlants:AT3G04850.1 GeneID:819645 KEGG:ath:AT3G04850
TAIR:At3g04850 eggNOG:NOG290226 HOGENOM:HOG000147065
InParanoid:Q84JZ8 OMA:LWVENSK PhylomeDB:Q84JZ8
ProtClustDB:CLSN2918528 Genevestigator:Q84JZ8 Uniprot:Q84JZ8
Length = 639
Score = 234 (87.4 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 47/104 (45%), Positives = 59/104 (56%)
Query: 95 KPCNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRP 153
K C C KS CLKLYC+CF+ G FC + C+C +CFN HED + RNP AF P
Sbjct: 453 KRCKCRKSQCLKLYCECFSAGLFCGEPCSCQNCFNKPIHEDLVMKSREVIKARNPLAFAP 512
Query: 154 KIGKC------LVGEGER-----RHTKGCNCKRSGCLKNYCECY 186
K+ L E + RH +GCNC++SGC K YCEC+
Sbjct: 513 KVVSTSDTVIDLWVENSKTPASARHKRGCNCRKSGCSKKYCECF 556
Score = 186 (70.5 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 1 YCDCFANGEFCYQ-CNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKC------LV 53
YC+CF+ G FC + C+C +CFN HED + RNP AF PK+ L
Sbjct: 466 YCECFSAGLFCGEPCSCQNCFNKPIHEDLVMKSREVIKARNPLAFAPKVVSTSDTVIDLW 525
Query: 54 GEGER-----RHTKGCNCKRSGCLKNYCECYEAG 82
E + RH +GCNC++SGC K YCEC+ G
Sbjct: 526 VENSKTPASARHKRGCNCRKSGCSKKYCECFMMG 559
Score = 114 (45.2 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 88 PNGIRPRKPCNCTKSMCLKLYCDCFANGEFCYQ-CNCNSCFNNIEHEDDR 136
P R ++ CNC KS C K YC+CF G C C C C N H +++
Sbjct: 532 PASARHKRGCNCRKSGCSKKYCECFMMGVGCSSNCRCMGCKNTFGHTNEQ 581
Score = 89 (36.4 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 54 GEGERRHTKGCNCKRSGCLKNYCECYEAGARTLEP 88
G E K C C++S CLK YCEC+ AG EP
Sbjct: 445 GLDELGSCKRCKCRKSQCLKLYCECFSAGLFCGEP 479
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 55/198 (27%), Positives = 77/198 (38%)
Query: 1 YCDCFANGEF--------CYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKC- 51
YC+ A+G F C C+CN+ N + H QC E PN + +C
Sbjct: 860 YCELCADGYFGDAVDAKNCQPCHCNA---NGSFSEVCHAQTGQC-ECKPNVQGRRCDECK 915
Query: 52 --LVGEGERRHTKGCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYC 109
G R CNC G K++ +C E+G +P G+ +K C + C Y
Sbjct: 916 PETFGLQSARGCIPCNCNSFGS-KSF-DCEESGQCWCQP-GVTGKK---CDR--CAHGYF 967
Query: 110 DCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLV---GEGERR 166
+ F G C C+C+ NN + + R C+ PN K KC G
Sbjct: 968 N-FQEGG-CTACDCSHLGNNCDPKTGR------CI-CPPNTIGEKCSKCAPRTWGHSITT 1018
Query: 167 HTKGCNCKRSGCLKNYCE 184
K CNC G L C+
Sbjct: 1019 GCKACNCSSVGSLDFQCD 1036
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 54/197 (27%), Positives = 74/197 (37%)
Query: 1 YCDCFANGEF--------CYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCL 52
YC+ A+G F C C CN+ + H QC E N + KC
Sbjct: 897 YCELCADGYFGDAVDAKNCQPCRCNA---GGSFSEVCHSQTGQC-ECRANVQGQRCDKCK 952
Query: 53 VGEGERRHTKGC---NCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYC 109
G + +GC NC G K++ +C E+G +P G+ +K C + C Y
Sbjct: 953 AGTFGLQSARGCVPCNCNSFGS-KSF-DCEESGQCWCQP-GVTGKK---CDR--CAHGYF 1004
Query: 110 DCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLV---GEGERR 166
+ F G C C C+ NN + + R C+ PN K KC G
Sbjct: 1005 N-FQEGG-CTACECSHLGNNCDPKTGR------CI-CPPNTIGEKCSKCAPNTWGHSITT 1055
Query: 167 HTKGCNCKRSGCLKNYC 183
K CNC G L C
Sbjct: 1056 GCKACNCSTVGSLDFQC 1072
>UNIPROTKB|Q22KY6 [details] [associations]
symbol:TTHERM_01178680 "Neurohypophysial hormone,
N-terminal Domain containing protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0004252 "serine-type endopeptidase activity"
evidence=ISS] InterPro:IPR000742 SMART:SM00181 GO:GO:0004252
InterPro:IPR015500 PANTHER:PTHR10795 InterPro:IPR006212
InterPro:IPR009030 SMART:SM00261 SUPFAM:SSF57184 EMBL:GG662532
RefSeq:XP_976537.1 ProteinModelPortal:Q22KY6
EnsemblProtists:EAR85942 GeneID:7836315 KEGG:tet:TTHERM_01178680
ProtClustDB:CLSZ2497429 Uniprot:Q22KY6
Length = 2391
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 51/192 (26%), Positives = 73/192 (38%)
Query: 2 CDCFANGEFCYQCN------CNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGK-CLVG 54
C C C QCN CN+C N D +C+ +N + P+ G CL
Sbjct: 1592 CQCTIPN--CQQCNPIDGSICNTCSNGYTSSKDNKTC--KCISQNCLSCDPQNGNLCL-- 1645
Query: 55 EGERRHT----KGCNCKRSGCLKNYCECYEAGARTLEPNGIRP---RKPCNCTKSMCLKL 107
+ ++ +T + C C+ S C KN C + G P K C C CLK
Sbjct: 1646 KCQQNYTLNLNQQCVCQVSNC-KN-CNINDGQICDSCDQGFIPINNNKACQCGIQNCLK- 1702
Query: 108 YCDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGEGERRH 167
C+ NG C QC N ++ + ++ CL N N CL G + +
Sbjct: 1703 -CNP-QNGNVCQQCQANYALSS--NSTQCICSVLNCLSCNVND-GSICDICLAGFAPQNN 1757
Query: 168 TKGCNCKRSGCL 179
K C + CL
Sbjct: 1758 NKVCQPQIKNCL 1769
>ZFIN|ZDB-GENE-081030-4 [details] [associations]
symbol:lamb2 "laminin, beta 2 (laminin S)"
species:7955 "Danio rerio" [GO:0016203 "muscle attachment"
evidence=IMP] [GO:0070831 "basement membrane assembly"
evidence=IMP] [GO:0061053 "somite development" evidence=IMP]
ZFIN:ZDB-GENE-081030-4 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 HOGENOM:HOG000007552
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:3913 KO:K06243 OrthoDB:EOG4KSPHW
EMBL:AL953864 IPI:IPI00499348 RefSeq:NP_001229974.1
UniGene:Dr.158661 UniGene:Dr.78258 Ensembl:ENSDART00000012166
Ensembl:ENSDART00000147326 GeneID:337767 KEGG:dre:337767
NextBio:20812405 Uniprot:B7ZDA6
Length = 1782
Score = 114 (45.2 bits), Expect = 0.00093, P = 0.00093
Identities = 55/202 (27%), Positives = 73/202 (36%)
Query: 2 CDCFANGEFCYQCNCNSCFNNIEHEDDRHHAIRQCLERNPNAFRPKIGKCLVGE-GERRH 60
CD G + + NC C N H D+ H CL N K +C G G
Sbjct: 845 CDGCQAGHWGFP-NCRPCQCN-GHADECHQRTGACLNCRSNTAGDKCERCANGYYGNPVL 902
Query: 61 TKGCNCKRSGCLKNYCECYEAGARTLEPNGIRPRKPCNCTKSMCLKLYCDCFANGEFCY- 119
G C+ C + A + N + + CNC + CD A G F
Sbjct: 903 GLGSQCRPCPCPEGPNSGRHFAASCYQDNRSQ-QVVCNCNQGYTGPR-CDECAPGYFGDP 960
Query: 120 -----QCNCNSCFNNIEHEDDRHHAIR--QCLERNPNAFRPKIGKC---LVGEGERRHTK 169
QC C NNI+ D R QCL+ N P C G+ RR+ +
Sbjct: 961 SKPGGQCQPCRCSNNIDLSDPESCDKRTGQCLKCLYNTEGPDCSVCRSGYYGDASRRNCR 1020
Query: 170 GCNC-----KRSGCL-KNYCEC 185
C C +RS CL ++ C C
Sbjct: 1021 KCTCNFLGTERSQCLSRDDCVC 1042
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.141 0.516 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 186 186 0.00083 110 3 12 22 0.38 32
31 0.41 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 529 (56 KB)
Total size of DFA: 148 KB (2087 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.31u 0.11s 14.42t Elapsed: 00:00:01
Total cpu time: 14.31u 0.11s 14.42t Elapsed: 00:00:01
Start: Thu Aug 15 17:24:56 2013 End: Thu Aug 15 17:24:57 2013