BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17548
(426 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
R F+++D +GN +I++D ++ +LA+LD +D M ++D D G + FM
Sbjct: 6 REAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVM 65
Query: 351 FGDPE 355
G E
Sbjct: 66 TGGDE 70
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
R F+++D +GN +I++D ++ +LA+LD +D M ++D D G + FM
Sbjct: 94 REAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 260 PVWVLGSETHL-TVTFSFEK-RLACLESSADKAR---RVFKMFDPDGNNFIASDHLQNLL 314
P LGS H+ V + EK R CL A + R F+ D DG+ + +D + L
Sbjct: 6 PRGPLGS--HMDAVDATMEKLRAQCLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGL 63
Query: 315 AKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEFFGDPEKPP 358
AKL LV D + + +K D + G + L F+ +PP
Sbjct: 64 AKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRAL-----RPP 102
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 240 TLLEHLRYCEVGSYLKNPINPVWVLGSETHLTVTF-SFEKRLA-CLESSADKARRVFKMF 297
T++ L + L++ IN V G + T+ F F +A ++ S ++ R F++F
Sbjct: 34 TVMRSLGQNPTEAELQDMINEVDADG---NGTIDFPEFLTMMARKMKDSEEEIREAFRVF 90
Query: 298 DPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
D DGN FI++ L++++ L VD M ++ D D G + F+
Sbjct: 91 DKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 140
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 35.0 bits (79), Expect = 0.082, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILL 343
E ++ R FK+FD DGN FI+ L + L + + ++++ ++LD D G +
Sbjct: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91
Query: 344 SAFM 347
F+
Sbjct: 92 EEFV 95
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 373 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 432
Query: 346 FM 347
F+
Sbjct: 433 FV 434
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
R F++FD DGN F+++ L++++ +L VD M + D D G + F+
Sbjct: 86 REAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFV 142
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN FI++ L++++ L VD M ++ D D G +
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 346 FM 347
F+
Sbjct: 141 FV 142
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN FI++ L++++ L VD M ++ D D G +
Sbjct: 81 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 346 FM 347
F+
Sbjct: 141 FV 142
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN FI++ L++++ L VD M ++ D D G +
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN FI++ L++++ L VD M ++ D D G +
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 346 FM 347
F+
Sbjct: 442 FV 443
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 345 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 404
Query: 346 FM 347
F+
Sbjct: 405 FV 406
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 346 FM 347
F+
Sbjct: 442 FV 443
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 346 FM 347
F+
Sbjct: 441 FV 442
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 346 FM 347
F+
Sbjct: 442 FV 443
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 346 FM 347
F+
Sbjct: 441 FV 442
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 346 FM 347
F+
Sbjct: 442 FV 443
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S +K + F++FD DGN FI++ L++++ L VD M ++ D D G +
Sbjct: 81 SEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 346 FM 347
F+
Sbjct: 141 FV 142
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 383 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 442
Query: 346 FM 347
F+
Sbjct: 443 FV 444
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 382 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 441
Query: 346 FM 347
F+
Sbjct: 442 FV 443
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 381 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 440
Query: 346 FM 347
F+
Sbjct: 441 FV 442
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 346 FM 347
F+
Sbjct: 408 FV 409
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 348 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 407
Query: 346 FM 347
F+
Sbjct: 408 FV 409
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN FI++ L++++ L VD M ++ D D G +
Sbjct: 82 SEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 33.1 bits (74), Expect = 0.28, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 346 FM 347
F+
Sbjct: 67 FV 68
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 33.1 bits (74), Expect = 0.30, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 346 FM 347
F+
Sbjct: 63 FV 64
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 33.1 bits (74), Expect = 0.30, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 346 FM 347
F+
Sbjct: 64 FV 65
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 346 FM 347
F+
Sbjct: 141 FV 142
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 33.1 bits (74), Expect = 0.30, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 346 FM 347
F+
Sbjct: 66 FV 67
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 346 FM 347
F+
Sbjct: 139 FV 140
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 33.1 bits (74), Expect = 0.33, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 346 FM 347
F+
Sbjct: 63 FV 64
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 78 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 137
Query: 346 FM 347
F+
Sbjct: 138 FV 139
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 77 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 136
Query: 346 FM 347
F+
Sbjct: 137 FV 138
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 346 FM 347
F+
Sbjct: 139 FV 140
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 79 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 138
Query: 346 FM 347
F+
Sbjct: 139 FV 140
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 288 DKARRVFKMFDPDGNNFIASDHLQNLLAKL 317
D R F MFD DG FI D+L++LL +
Sbjct: 85 DALRNAFSMFDEDGQGFIPEDYLKDLLENM 114
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 346 FM 347
F+
Sbjct: 141 FV 142
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 80 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 139
Query: 346 FM 347
F+
Sbjct: 140 FV 141
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 87 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 146
Query: 346 FM 347
F+
Sbjct: 147 FV 148
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 346 FM 347
F+
Sbjct: 141 FV 142
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|3ALX|A Chain A, Crystal Structure Of The Measles Virus Hemagglutinin Bound
To Its Cellular Receptor Slam
(Mv-H(L482r)-Slam(N102hR108Y) FUSION)
pdb|3ALX|B Chain B, Crystal Structure Of The Measles Virus Hemagglutinin Bound
To Its Cellular Receptor Slam
(Mv-H(L482r)-Slam(N102hR108Y) FUSION)
pdb|3ALX|C Chain C, Crystal Structure Of The Measles Virus Hemagglutinin Bound
To Its Cellular Receptor Slam
(Mv-H(L482r)-Slam(N102hR108Y) FUSION)
pdb|3ALX|D Chain D, Crystal Structure Of The Measles Virus Hemagglutinin Bound
To Its Cellular Receptor Slam
(Mv-H(L482r)-Slam(N102hR108Y) FUSION)
Length = 559
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 95 VHAVVEMLKQAVDSNTFHIVYIDATEASSPDYSFDQF-----HSQIKVQSCSSCDEVEQF 149
+H VV M K +S IV +D +EA P Y D++ H + + + DE F
Sbjct: 470 IHIVVTMAKSLENSVENKIVSLDPSEAGPPRYLKDRYRFYLEHLSLAIYESTKKDEGWYF 529
Query: 150 YNQRIDLLYNRFGVLLFLY 168
++ RF + L LY
Sbjct: 530 MTLEKNISVQRFCLHLKLY 548
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 85 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 144
Query: 346 FM 347
F+
Sbjct: 145 FV 146
>pdb|3ALW|A Chain A, Crystal Structure Of The Measles Virus Hemagglutinin Bound
To Its Cellular Receptor Slam (Form I,
Mv-H-Slam(N102hR108Y) FUSION)
Length = 559
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 95 VHAVVEMLKQAVDSNTFHIVYIDATEASSPDYSFDQF-----HSQIKVQSCSSCDEVEQF 149
+H VV M K +S IV +D +EA P Y D++ H + + + DE F
Sbjct: 470 IHIVVTMAKSLENSVENKIVSLDPSEAGPPRYLKDRYRFYLEHLSLAIYESTKKDEGWYF 529
Query: 150 YNQRIDLLYNRFGVLLFLY 168
++ RF + L LY
Sbjct: 530 MTLEKNISVQRFCLHLKLY 548
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 83 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 142
Query: 346 FM 347
F+
Sbjct: 143 FV 144
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 140
Query: 346 FM 347
F+
Sbjct: 141 FV 142
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ + F++FD DGN FI++ L++++ L VD M ++ D D G +
Sbjct: 78 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 137
Query: 346 FM 347
F+
Sbjct: 138 FV 139
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ + F++FD DGN FI++ L++++ L VD M ++ D D G +
Sbjct: 81 SEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEE 140
Query: 346 FM 347
F+
Sbjct: 141 FV 142
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 32.0 bits (71), Expect = 0.63, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPD 336
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADID 55
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 36/63 (57%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R FKMFD DG+ I++ L L ++ D + ++ + +++D ++ G + +
Sbjct: 415 SRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNE 474
Query: 346 FMD 348
F++
Sbjct: 475 FVE 477
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 32.0 bits (71), Expect = 0.64, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 288 DKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
++ R F++FD DGN +I++ L++++ L VD M ++ D D G + F+
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 32.0 bits (71), Expect = 0.74, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 287 ADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAF 346
AD+ R+FK FD +G+ I+S L + L L V+ + V M ++D D G I F
Sbjct: 11 ADR-ERIFKRFDTNGDGKISSSELGDALKTLGSVTP-DEVRRMMAEIDTDGDGFISFDEF 68
Query: 347 MD 348
D
Sbjct: 69 TD 70
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
+ ++ R FK+FD DG+ FI+ L+ ++ L +D M ++ D D G+I
Sbjct: 81 TEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEE 140
Query: 346 FM 347
F+
Sbjct: 141 FV 142
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 31.2 bits (69), Expect = 1.0, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKL 317
S ++ R F++FD DGN +I++ L++++ L
Sbjct: 36 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKL 317
S ++ R F++FD DGN +I++ L++++ L
Sbjct: 81 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL 112
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 39/78 (50%)
Query: 240 TLLEHLRYCEVGSYLKNPINPVWVLGSETHLTVTFSFEKRLACLESSADKARRVFKMFDP 299
T++ L + L++ IN V G+ T F ++ +++ R F++FD
Sbjct: 30 TVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDK 89
Query: 300 DGNNFIASDHLQNLLAKL 317
DGN +I++ L++++ L
Sbjct: 90 DGNGYISAAELRHVMTNL 107
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 292 RVFKMFDPDGNNFIASDHLQNLLAKL--DLVSDINYVDIMRKKLDPDELGIILLSAFMD 348
R FK+FD +G+ I D + ++ K+ + ++D + M K+ D D G+I + FMD
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAM-KEADEDGNGVIDIPEFMD 69
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 240 TLLEHLRYCEVGSYLKNPINPVWVLGSET-HLTVTFSFEKRLACLESSADKARRVFKMFD 298
T++ L + L++ IN V G+ T S R + S ++ FK+FD
Sbjct: 34 TVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFD 93
Query: 299 PDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
DGN I++ L++++ L + VD M ++ D D G I F+
Sbjct: 94 RDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 240 TLLEHLRYCEVGSYLKNPINPVWVLGSET-HLTVTFSFEKRLACLESSADKARRVFKMFD 298
T++ L + L++ IN V G+ T S R + S ++ FK+FD
Sbjct: 34 TVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFD 93
Query: 299 PDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
DGN I++ L++++ L + VD M ++ D D G I F+
Sbjct: 94 RDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 252 SYLKNPINPVWVLGSET-HLTVTFSFEKRLACLESSADKARRVFKMFDPDGNNFIASDHL 310
+ L++ IN V G+ T + + R S ++ R F++FD DGN +I++ L
Sbjct: 46 AELQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAEL 105
Query: 311 QNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
+++ L VD ++ D D G + F+
Sbjct: 106 RHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFV 142
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 30.8 bits (68), Expect = 1.6, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILL 343
+ S ++ FK+FD DGN I++ L++++ L + VD M ++ D D G I
Sbjct: 4 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINY 63
Query: 344 SAFM 347
F+
Sbjct: 64 EEFV 67
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 30.4 bits (67), Expect = 1.8, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ + F++FD D N FI++ L++++ L VD M ++ D D G I
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 61
Query: 346 FM 347
F+
Sbjct: 62 FV 63
>pdb|3ALZ|B Chain B, Crystal Structure Of The Measles Virus Hemagglutinin Bound
To Its Cellular Receptor Slam (Form I)
Length = 149
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 95 VHAVVEMLKQAVDSNTFHIVYIDATEASSPDYSFDQF-----HSQIKVQSCSSCDEVEQF 149
+H VV M K +S IV +D +EA P Y D++ + + ++ + DE F
Sbjct: 60 IHIVVTMAKSLENSVENKIVSLDPSEAGPPRYLKDRYRFYLENLSLAIRESTKKDEGWYF 119
Query: 150 YNQRIDLLYNRFGVLLFLY 168
++ RF + L LY
Sbjct: 120 MTLEKNISVQRFCLHLKLY 138
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 30.4 bits (67), Expect = 2.2, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 287 ADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAF 346
AD R+FK FD +G+ I+ L + L L S + V M ++D D G I + F
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTS-ADEVQRMMAEIDTDGDGFIDFNEF 60
Query: 347 M 347
+
Sbjct: 61 I 61
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.4 bits (67), Expect = 2.2, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 287 ADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAF 346
AD R+FK FD +G+ I+ L + L L S + V M ++D D G I + F
Sbjct: 1 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTS-ADEVQRMMAEIDTDGDGFIDFNEF 59
Query: 347 M 347
+
Sbjct: 60 I 60
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 30.0 bits (66), Expect = 2.4, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLL 314
+ SAD ++VF M D D + FI D L +L
Sbjct: 38 KKSADDVKKVFHMLDKDKSGFIEEDELGFIL 68
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 30.0 bits (66), Expect = 2.5, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 288 DKARR--VFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
DKA R +FK FD +G+ I++ L L L ++ + V M ++D D G I
Sbjct: 7 DKAERERIFKRFDANGDGKISAAELGEALKTLGSITP-DEVKHMMAEIDTDGDGFISFQE 65
Query: 346 FMD 348
F D
Sbjct: 66 FTD 68
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLL 314
+ SAD ++VF + D D + FI D L ++L
Sbjct: 37 KKSADDVKKVFHILDKDKSGFIEEDELGSIL 67
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLL 314
+ SAD ++VF + D D + FI D L ++L
Sbjct: 37 KKSADDVKKVFHILDKDKSGFIEEDELGSIL 67
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 252 SYLKNPINPVWVLGSETHLTVTF----SFEKRLACLESSADKARRVFKMFDPDGNNFIAS 307
+ L++ IN V G + T+ F + R S ++ R F++FD DGN +I++
Sbjct: 46 AELQDXINEVDADG---NGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISA 102
Query: 308 DHLQNLLAKL 317
L+++ L
Sbjct: 103 AELRHVXTNL 112
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLL 314
+ SAD ++VF + D D + FI D L ++L
Sbjct: 37 KKSADDVKKVFHILDKDKSGFIEEDELGSIL 67
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 252 SYLKNPINPVWVLGSETHLTVTF----SFEKRLACLESSADKARRVFKMFDPDGNNFIAS 307
+ L++ IN V G + T+ F + R S ++ R F++FD DGN +I++
Sbjct: 47 AELQDXINEVDADG---NGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISA 103
Query: 308 DHLQNLLAKL 317
L+++ L
Sbjct: 104 AELRHVXTNL 113
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 285 SSADKARRVFKMFDPDGNNFIASDHLQNLLAKL 317
+S D R+ F+ FDP+G +I LQ+ L L
Sbjct: 76 TSEDILRQAFRTFDPEGTGYIPKAALQDALLNL 108
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLL 314
+ SAD ++VF + D D + FI D L ++L
Sbjct: 37 KKSADDVKKVFHILDKDKDGFIDEDELGSIL 67
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 29.6 bits (65), Expect = 3.4, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLL 314
SAD ++VF + D D + FI D L ++L
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSIL 31
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 29.6 bits (65), Expect = 3.7, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 279 RLACLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDEL 338
R+ E + R F +FD DG+ I + L+ + L + M ++D D
Sbjct: 21 RVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGS 80
Query: 339 GIILLSAFM 347
G I F+
Sbjct: 81 GTIDFEEFL 89
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 20/67 (29%)
Query: 285 SSADKARRVFKMFDPDGNNFIASDHLQNLLAKL--------------------DLVSDIN 324
++AD+ FK FD +G I+S ++N+L L D+ +I
Sbjct: 82 TAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIK 141
Query: 325 YVDIMRK 331
Y D+M+K
Sbjct: 142 YEDLMKK 148
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ + F++FD D N FI++ L++++ L VD M ++ D D G I
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ + F++FD D N FI++ L++++ L VD M ++ D D G I
Sbjct: 82 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDE 141
Query: 346 FM 347
F+
Sbjct: 142 FV 143
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 28.9 bits (63), Expect = 5.1, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++ D DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 86
Query: 346 FM 347
F+
Sbjct: 87 FV 88
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 28.5 bits (62), Expect = 7.4, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILL 343
E + + F +FD D N I+S L ++ L L V+ + ++D D I
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 344 SAFMDEF-----FGDPEKPPPDMFDIFHYNG 369
S F+ D E+ + F +F NG
Sbjct: 66 SEFLALMSRQLKSNDSEQELLEAFKVFDKNG 96
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
+ F +FD D N I+S L ++ L L V+ + ++D D I S F+
Sbjct: 14 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 73
Query: 351 -----FGDPEKPPPDMFDIFHYNG 369
D E+ + F +F NG
Sbjct: 74 SRQLKSNDSEQELLEAFKVFDKNG 97
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 289 KARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDIN-------YVDIMRKKLDPDELGII 341
K R FK++D DGN I L N++ + ++ N + +++ K+D + G +
Sbjct: 89 KLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGEL 148
Query: 342 LLSAFMD 348
L FM+
Sbjct: 149 SLEEFME 155
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIM 329
S ++ RR F +FD D + I + L NL L +S+ + D++
Sbjct: 433 SEERLRRAFNLFDTDKSGKITKEELANLFG-LTSISEKTWNDVL 475
>pdb|4A4Z|A Chain A, Crystal Structure Of The S. Cerevisiae Dexh Helicase Ski2
Bound To Amppnp
Length = 997
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 29/115 (25%)
Query: 254 LKNPINPVWVLGSETHLTVTFSFEKRLACLESSADKARRVFKMFDPDGNNFIASDHLQNL 313
+K I ++ L S+ +L++ +EKRLA L+ + FI +H N+
Sbjct: 780 IKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDT----------------EFIDQNH--NV 821
Query: 314 LAKLDLVSDIN----------YVDIMRKKLDPDELGIILLSAFMDEFFGDPEKPP 358
L K + +IN +D +P+E+ + LLS F+ E E+PP
Sbjct: 822 LLKGRVACEINSGYELVLTELILDNFLGSFEPEEI-VALLSVFVYEGKTREEEPP 875
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,027,232
Number of Sequences: 62578
Number of extensions: 549913
Number of successful extensions: 1321
Number of sequences better than 100.0: 118
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1177
Number of HSP's gapped (non-prelim): 179
length of query: 426
length of database: 14,973,337
effective HSP length: 102
effective length of query: 324
effective length of database: 8,590,381
effective search space: 2783283444
effective search space used: 2783283444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)