RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17548
(426 letters)
>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 77
Score = 41.8 bits (98), Expect = 6e-06
Identities = 12/63 (19%), Positives = 26/63 (41%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ + F++FD D + I L+ + +L + M + D ++ I
Sbjct: 7 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66
Query: 346 FMD 348
F+
Sbjct: 67 FIR 69
Score = 24.8 bits (54), Expect = 6.8
Identities = 6/34 (17%), Positives = 15/34 (44%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDL 319
+ ++ + + D + +N I D ++ K L
Sbjct: 43 TEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 76
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 67
Score = 41.5 bits (97), Expect = 6e-06
Identities = 11/59 (18%), Positives = 24/59 (40%)
Query: 290 ARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMD 348
A+RVF+ FD + + ++ D + + + +++D D G + F
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium
album) [TaxId: 3559]}
Length = 81
Score = 41.5 bits (97), Expect = 8e-06
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
R+FK FD +G+ I+S L + L L V+ +M ++D D G I F +F
Sbjct: 9 ERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMM-AEIDTDGDGFISFDEFT-DF 66
Query: 351 FGDPEKPPPDMFDIF 365
D+ IF
Sbjct: 67 ARANRGLVKDVSKIF 81
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId:
10116]}
Length = 73
Score = 41.1 bits (96), Expect = 1e-05
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 288 DKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
+ + F +FD DG+ I + L ++ L + M ++D D G I F+
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 348 D 348
Sbjct: 68 T 68
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId:
9913]}
Length = 61
Score = 40.0 bits (93), Expect = 2e-05
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 288 DKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
+ + F++FD + ++ L+ +L L VD + K ++ D G I F+
Sbjct: 1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60
Query: 348 D 348
+
Sbjct: 61 E 61
>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 75
Score = 39.5 bits (92), Expect = 4e-05
Identities = 13/63 (20%), Positives = 26/63 (41%)
Query: 285 SSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLS 344
S ++ F++FD + + FI + L +L ++ + K D + G I
Sbjct: 6 KSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 65
Query: 345 AFM 347
F+
Sbjct: 66 EFL 68
>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}
Length = 65
Score = 38.5 bits (89), Expect = 7e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSA 345
S ++ R F++FD DGN +I++ L++++ L VD M ++ D D G +
Sbjct: 1 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 60
Query: 346 FM 347
F+
Sbjct: 61 FV 62
>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac
isoform [TaxId: 9031]}
Length = 81
Score = 38.8 bits (90), Expect = 8e-05
Identities = 12/65 (18%), Positives = 30/65 (46%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILL 343
+ ++ +F+MFD + + +I + L+ +L + ++ + K D + G I
Sbjct: 11 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 70
Query: 344 SAFMD 348
F++
Sbjct: 71 DEFLE 75
>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 109
Score = 39.1 bits (91), Expect = 1e-04
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 273 TFSFEKRLACL---ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINY---V 326
+F+ +K A + SA+ ++VFK D D + FI + L+ +L
Sbjct: 23 SFNHKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAET 82
Query: 327 DIMRKKLDPDELGIILLSAFMD 348
K D D G I + F
Sbjct: 83 KAFLKAADKDGDGKIGIDEFET 104
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus
(Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 68
Score = 37.5 bits (87), Expect = 2e-04
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 288 DKARRVFKMFDPDGNNFIASDHLQNLLAKL--DLVSDINYVDIMRKKLDPDELGIILLSA 345
++ R FK+FD +G+ I D + ++ K+ + ++D + M+ + D D G+I +
Sbjct: 2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMK-EADEDGNGVIDIPE 60
Query: 346 FMD 348
FMD
Sbjct: 61 FMD 63
>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 108
Score = 38.8 bits (90), Expect = 2e-04
Identities = 18/83 (21%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 273 TFSFEKRLACL---ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDL----VSDINY 325
TF +K + SA + + +F+ D D + ++ D L+ L K +++
Sbjct: 23 TFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESET 82
Query: 326 VDIMRKKLDPDELGIILLSAFMD 348
+M D D G I F +
Sbjct: 83 KSLM-DAADNDGDGKIGADEFQE 104
>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 77
Score = 37.7 bits (87), Expect = 2e-04
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMD 348
+ F +FD D N I+S L ++ L L V+ + ++D D I S F+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId:
10117]}
Length = 109
Score = 38.4 bits (89), Expect = 2e-04
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 273 TFSFEKRLACL---ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVS---DINYV 326
+F +K + + SAD ++VF + D D + FI D L ++L +
Sbjct: 23 SFDHKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKET 82
Query: 327 DIMRKKLDPDELGIILLSAFMD 348
+ D D G I + F
Sbjct: 83 KTLMAAGDKDGDGKIGVEEFST 104
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis
semifasciata) [TaxId: 30493]}
Length = 109
Score = 37.6 bits (87), Expect = 4e-04
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 273 TFSFEKRLACL---ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVS---DINYV 326
TF +++ + + + + VF++ D D + FI + L+ +L +
Sbjct: 23 TFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTET 82
Query: 327 DIMRKKLDPDELGIILLSAFM 347
+ D D G I F
Sbjct: 83 KALLAAGDSDHDGKIGADEFA 103
>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId:
8010]}
Length = 107
Score = 37.2 bits (86), Expect = 5e-04
Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 273 TFSFEKRLACL---ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDL----VSDINY 325
+F ++ A + S D ++ F + D D + FI D L+ L ++D
Sbjct: 22 SFKHKEFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAET 81
Query: 326 VDIMRKKLDPDELGIILLSAFMD 348
+ D D G+I + F
Sbjct: 82 KAFL-ADGDKDGDGMIGVDEFAA 103
>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 87
Score = 36.5 bits (84), Expect = 5e-04
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILL 343
E + +FKM D D + I D L++ L ++ + + + D D+ G I
Sbjct: 19 EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDY 78
Query: 344 SAFM 347
F+
Sbjct: 79 GEFI 82
>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 162
Score = 38.4 bits (88), Expect = 5e-04
Identities = 12/61 (19%), Positives = 25/61 (40%)
Query: 288 DKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
++ F++FD + + FI + L +L ++ + K D + G I F+
Sbjct: 96 EELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Query: 348 D 348
Sbjct: 156 K 156
Score = 29.1 bits (64), Expect = 0.66
Identities = 19/87 (21%), Positives = 33/87 (37%), Gaps = 8/87 (9%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
+ F MFD DG I++ L ++ L +D + +++D D G I F+
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 351 FGDPEKPPP--------DMFDIFHYNG 369
++ + F IF N
Sbjct: 83 VRQMKEDAKGKSEEELANCFRIFDKNA 109
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia)
[TaxId: 5888]}
Length = 146
Score = 37.9 bits (87), Expect = 6e-04
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 282 CLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGII 341
+ S ++ FK+FD DGN I++ L++++ L + VD M ++ D D G I
Sbjct: 76 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 135
Query: 342 LLSAFMD 348
F+
Sbjct: 136 NYEEFVR 142
Score = 32.6 bits (73), Expect = 0.040
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGII 341
+ F +FD DG+ I + L ++ L + M ++D D G I
Sbjct: 12 KEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 81
Score = 36.1 bits (83), Expect = 8e-04
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMD 348
+ F MFD DG I++ L ++ L +D + +++D D G I F+
Sbjct: 17 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 74
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human
(Homo sapiens) [TaxId: 9606]}
Length = 83
Score = 35.9 bits (82), Expect = 0.001
Identities = 10/68 (14%), Positives = 25/68 (36%)
Query: 283 LESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIIL 342
+ S + F+ FD N I+ + + + + + D + ++ + G +
Sbjct: 15 VTSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLK 74
Query: 343 LSAFMDEF 350
F+ F
Sbjct: 75 YPDFLSRF 82
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens),
cardiac isoform [TaxId: 9606]}
Length = 33
Score = 33.3 bits (77), Expect = 0.002
Identities = 11/32 (34%), Positives = 22/32 (68%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKL 317
S ++ R F++FD DGN +I++ L++++ L
Sbjct: 1 SEEEIREAFRVFDKDGNGYISAAELRHVMTNL 32
>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein
{Jellyfish (Aequorea aequorea), aequorin [TaxId:
168712]}
Length = 187
Score = 36.5 bits (83), Expect = 0.002
Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 5/79 (6%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILL 343
+F + D D N I D + ++ + + D DE G + +
Sbjct: 101 TLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDV 160
Query: 344 SAFMDEFFG-----DPEKP 357
+ G DP
Sbjct: 161 DEMTRQHLGFWYTMDPACE 179
Score = 29.6 bits (65), Expect = 0.56
Identities = 8/50 (16%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 270 LTVTFSFEKRLACLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDL 319
LT F + + + + +F D + N I+ D + + + +
Sbjct: 1 LTSDFDNPRWIG-------RHKHMFNFLDVNHNGKISLDEMVYKASDIVI 43
>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac
isoform [TaxId: 9606]}
Length = 82
Score = 34.6 bits (79), Expect = 0.003
Identities = 10/59 (16%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 291 RRVFKMFDPDGNN-FIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMD 348
+ F +F + I++ L ++ L + M ++D D G + F+
Sbjct: 18 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 76
>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 99
Score = 34.3 bits (78), Expect = 0.005
Identities = 11/82 (13%), Positives = 26/82 (31%), Gaps = 21/82 (25%)
Query: 290 ARRVFKMFDPDGNNFIASDHLQNLLAKL----------------DLVSDINYVDIMRKKL 333
+ F + D + + + L+ L K + + + K +
Sbjct: 18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNV 77
Query: 334 DPDELGIILLSAFM-----DEF 350
D ++ ++ L F+ EF
Sbjct: 78 DTNQDRLVTLEEFLASTQRKEF 99
>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein
{Sandworm (Nereis diversicolor) [TaxId: 126592]}
Length = 174
Score = 34.6 bits (78), Expect = 0.009
Identities = 16/99 (16%), Positives = 29/99 (29%), Gaps = 5/99 (5%)
Query: 267 ETHLTVTFSFEKRLACLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYV 326
T + K F+ D + +N I+ D L L
Sbjct: 73 TTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDK--TMA 130
Query: 327 DIMRKKLDPDELGIILLSAFMD---EFFGDPEKPPPDMF 362
+D + G++ L F+ +FF + +F
Sbjct: 131 PASFDAIDTNNDGLLSLEEFVIAGSDFFMNDGDSTNKVF 169
Score = 28.9 bits (63), Expect = 0.83
Identities = 6/48 (12%), Positives = 14/48 (29%)
Query: 289 KARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPD 336
K + F D D + I +++ + S++
Sbjct: 7 KMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLT 54
>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 141
Score = 34.1 bits (77), Expect = 0.010
Identities = 13/70 (18%), Positives = 29/70 (41%)
Query: 278 KRLACLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDE 337
+ + + ++ + FK+FD D I+ +L+ + +L + M + D D
Sbjct: 69 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 128
Query: 338 LGIILLSAFM 347
G + F+
Sbjct: 129 DGEVSEQEFL 138
Score = 30.3 bits (67), Expect = 0.22
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 5/91 (5%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
R F +FD DG I L+ + L + M ++D + G + F+
Sbjct: 9 REAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVM 68
Query: 351 F-----GDPEKPPPDMFDIFHYNGLARSNYE 376
D ++ F +F + + +++
Sbjct: 69 TQKMSEKDTKEEILKAFKLFDDDETGKISFK 99
>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId:
9823]}
Length = 78
Score = 32.9 bits (75), Expect = 0.010
Identities = 11/68 (16%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 284 ESSADKARRVFKMFD--PDGNNFIASDHLQNLLAKL--DLVSDINYVDIMRKKLDPDELG 339
+ S + + +F+ + N ++ + L+ L+ L+ +D + ++LD + G
Sbjct: 3 QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDG 62
Query: 340 IILLSAFM 347
+ F
Sbjct: 63 EVSFEEFQ 70
>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding
protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}
Length = 321
Score = 35.0 bits (79), Expect = 0.013
Identities = 13/129 (10%), Positives = 31/129 (24%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
R++F G+ + L+ +LAK + + ++ D G + +
Sbjct: 125 RQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVA 184
Query: 351 FGDPEKPPPDMFDIFHYNGLARSNYERKVMYRMAHCVLLECNINCLLETNPMLTCLQTKW 410
+ NG R+ R+ + +
Sbjct: 185 NDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSE 244
Query: 411 PSIELSWVH 419
+
Sbjct: 245 YVHLGLCLL 253
Score = 31.5 bits (70), Expect = 0.16
Identities = 8/61 (13%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Query: 289 KARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDIN-YVDIMRKKLDPDELGIILLSAFM 347
R ++ D D + ++ + +Q +L + + +D D+ + F+
Sbjct: 254 VLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFV 313
Query: 348 D 348
Sbjct: 314 M 314
>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens),
s100a4 [TaxId: 9606]}
Length = 93
Score = 32.5 bits (74), Expect = 0.015
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 8/76 (10%)
Query: 281 AC-LESSADKARRVFKMF-DPDGNNF-IASDHLQNLLAKLDL-----VSDINYVDIMRKK 332
AC LE + D F + +G+ F + L+ LL + +D +
Sbjct: 1 ACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSN 60
Query: 333 LDPDELGIILLSAFMD 348
LD + + +
Sbjct: 61 LDSNRDNEVDFQEYCV 76
>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 146
Score = 33.7 bits (76), Expect = 0.015
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 288 DKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
+ FK+FD +G+ I++ L+++L + VD M +++ D G I + F
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFA 141
Query: 348 D 348
Sbjct: 142 A 142
Score = 29.8 bits (66), Expect = 0.37
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMD-- 348
+ F +FD D N I+S L ++ L L V+ + ++D D I S F+
Sbjct: 13 KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72
Query: 349 ---EFFGDPEKPPPDMFDIFHYNG 369
D E+ + F +F NG
Sbjct: 73 SRQLKSNDSEQELLEAFKVFDKNG 96
>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 181
Score = 33.5 bits (75), Expect = 0.022
Identities = 14/97 (14%), Positives = 31/97 (31%), Gaps = 1/97 (1%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVS-DINYVDIMRKKLDPDELGIILLSAFMDE 349
VF+ D D + I+ + LQ L+ + V + D + + S F
Sbjct: 22 WNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGV 81
Query: 350 FFGDPEKPPPDMFDIFHYNGLARSNYERKVMYRMAHC 386
+ + +G+ N ++ + +
Sbjct: 82 WKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYR 118
>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 99
Score = 31.6 bits (71), Expect = 0.039
Identities = 10/69 (14%), Positives = 18/69 (26%), Gaps = 6/69 (8%)
Query: 280 LACLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKL-----DLVSDINYVDIMR-KKL 333
L L S + ++ + + + L K L + D L
Sbjct: 3 LTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVL 62
Query: 334 DPDELGIIL 342
E + L
Sbjct: 63 SKQEFFVAL 71
>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 156
Score = 32.6 bits (73), Expect = 0.042
Identities = 12/61 (19%), Positives = 29/61 (47%)
Query: 288 DKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
++ +F+MFD + + +I + L+ +L + ++ + K D + G I F+
Sbjct: 91 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 150
Query: 348 D 348
+
Sbjct: 151 E 151
Score = 29.5 bits (65), Expect = 0.38
Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 10/118 (8%)
Query: 291 RRVFKMFDPDGNN-FIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM-- 347
+ F +F + I++ L ++ L + M ++D D G + F+
Sbjct: 17 KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 76
Query: 348 ------DEFFGDPEKPPPDMFDIFHYNGL-ARSNYERKVMYRMAHCVLLECNINCLLE 398
D+ G E+ D+F +F N E K+M + + E +I L++
Sbjct: 77 MVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMK 134
>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal
domain (domain IV) {Rat (Rattus norvegicus), mu-type
[TaxId: 10116]}
Length = 188
Score = 32.8 bits (74), Expect = 0.052
Identities = 8/57 (14%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFM 347
+F+ FD D + +++ ++ + ++ + D+ II F+
Sbjct: 96 LTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR-FADDELIIDFDNFV 151
Score = 25.8 bits (56), Expect = 8.2
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 273 TFSFEKRLACLESSADKARRVFKMFDPDGNNFIASDHLQ 311
F+ + CL + ++FK DP+ I D +
Sbjct: 144 IIDFDNFVRCL-VRLEILFKIFKQLDPENTGTIQLDLIS 181
>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 176
Score = 32.3 bits (72), Expect = 0.056
Identities = 7/48 (14%), Positives = 18/48 (37%)
Query: 286 SADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKL 333
++D+ ++ F +D DGN + + + + + L
Sbjct: 5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTL 52
>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 182
Score = 31.9 bits (71), Expect = 0.079
Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 4/105 (3%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
+ +FKM D D + I D L++ L ++ + + + D D+ G I F+
Sbjct: 13 KELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 72
Query: 351 F----GDPEKPPPDMFDIFHYNGLARSNYERKVMYRMAHCVLLEC 391
+ E+ F F +G + +
Sbjct: 73 VHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIH 117
>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein
{Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 185
Score = 31.9 bits (71), Expect = 0.088
Identities = 9/80 (11%), Positives = 18/80 (22%), Gaps = 5/80 (6%)
Query: 282 CLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGII 341
++ +FK D G+ + + QN L +
Sbjct: 99 LPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVY--NVITDGGKVTF 156
Query: 342 LLSAF---MDEFFGDPEKPP 358
L+ + P
Sbjct: 157 DLNRYKELYYRLLTSPAADA 176
>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 146
Score = 31.6 bits (70), Expect = 0.088
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDL 319
+ +F +FD G IA D L + L +
Sbjct: 5 KDIFTLFDKKGQGAIAKDSLGDYLRAIGY 33
>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11
s100a10, calpactin [TaxId: 9606]}
Length = 92
Score = 30.3 bits (68), Expect = 0.11
Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 16/89 (17%)
Query: 283 LESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLV-----SDINYVDIMRKKLDPDE 337
+E + + F F ++ + L+ L+ K D VD + K LD
Sbjct: 4 MEHAMETMMFTFHKFA-GDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCR 62
Query: 338 LGIILLSAFMD----------EFFGDPEK 356
G + +F ++F K
Sbjct: 63 DGKVGFQSFFSLIAGLTIACNDYFVVHMK 91
>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein
{Leishmania major [TaxId: 5664]}
Length = 182
Score = 30.8 bits (68), Expect = 0.19
Identities = 17/97 (17%), Positives = 29/97 (29%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
F+ D DG+ I+ L L+ + + + + D + G I F D
Sbjct: 21 MEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLH 80
Query: 351 FGDPEKPPPDMFDIFHYNGLARSNYERKVMYRMAHCV 387
+G SN R + + V
Sbjct: 81 HFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQV 117
>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId:
9606]}
Length = 165
Score = 30.3 bits (68), Expect = 0.23
Identities = 6/43 (13%), Positives = 15/43 (34%)
Query: 294 FKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPD 336
F D DG+ + L+ + + + + K+ +
Sbjct: 76 FMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN 118
>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId:
9913]}
Length = 76
Score = 28.7 bits (64), Expect = 0.24
Identities = 12/66 (18%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 286 SADKARRVFKMFDPDGNN--FIASDHLQNLLAKL--DLVSDINYVDIMRKKLDPDELGII 341
S ++ + F++F + I+ + L+ ++ L L+ ++ +D M +++D + G +
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEV 62
Query: 342 LLSAFM 347
F+
Sbjct: 63 SFEEFL 68
>gi|148225444|ref|NP_001084009.1|(23-166:170) myosin light chain,
phosphorylatable, fast skeletal muscle [Xenopus laevis]
gi|27371289|gb|AAH41503.1| Mylpf-prov protein [Xenopus
laevis] gi|32450381|gb|AAH53808.1| Mylpf-prov protein
[Xenopus laevis] gi|45361043|ref|NP_989158.1| myosin,
light polypeptide 2, regulatory, cardiac, slow [Xenopus
(Silurana) tropicalis] gi|38494267|gb|AAH61602.1| Fast
skeletal myosin light chain 2 [Xenopus tropicalis]
gi|68342098|gb|AAY90073.1| MLC2 [Xenopus tropicalis]
gi|89272443|emb|CAJ83266.1| fast skeletal myosin light
chain 2 [Xenopus tropicalis] E=1e-68 s/c=1.81 id=86%
cov=100%
Length = 144
Score = 29.9 bits (66), Expect = 0.27
Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 5/102 (4%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
+ F + D + + I + L++ A + +N + +++ + G I + F+ F
Sbjct: 10 KEAFTVIDQNRDGIIDKEDLRDTFAAMG---RVNVKNEELEEMVKEASGPINFTVFLTMF 66
Query: 351 FGDPEKPPPD--MFDIFHYNGLARSNYERKVMYRMAHCVLLE 390
+ P+ + F +K +
Sbjct: 67 GEKLKGADPEDVITGAFKVLDPEAKGSIKKQFLEELLTTQCD 108
>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 28.8 bits (64), Expect = 0.30
Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 8/69 (11%)
Query: 285 SSADKAR--RVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIIL 342
S A+KA+ +F D D + F++ ++ L + + D + G +
Sbjct: 5 SPAEKAKYDEIFLKTDKDMDGFVSGLEVRE--IFLKTGLPSTLLAHIWSLCDTKDCGKL- 61
Query: 343 LSAFMDEFF 351
D+F
Sbjct: 62 ---SKDQFA 67
>gi|147905802|ref|NP_001079458.1|(49-190:190) hypothetical protein
LOC379145 [Xenopus laevis] gi|27552841|gb|AAH42934.1|
MGC53335 protein [Xenopus laevis]
gi|148231599|ref|NP_001080252.1| myosin light chain,
alkali, fast skeletal muscle [Xenopus laevis]
gi|602988|gb|AAB00988.1| MLC1f/3f gene product
gi|27371205|gb|AAH41529.1| Myl1-prov protein [Xenopus
laevis] gi|45360563|ref|NP_988954.1| myosin, light
chain 1, alkali; skeletal, fast [Xenopus (Silurana)
tropicalis] gi|38174703|gb|AAH61302.1| Myosin, light
chain 1, alkali; skeletal, fast [Xenopus tropicalis]
gi|58476384|gb|AAH89727.1| Myosin, light chain 1,
alkali; skeletal, fast [Xenopus tropicalis]
gi|89272939|emb|CAJ83178.1| myosin, light polypeptide 1,
alkali; skeletal, fast [Xenopus tropicalis]
gi|197246634|gb|AAI69133.1| Myl1 protein [Xenopus
tropicalis] E=2e-66 s/c=1.79 id=85% cov=99%
Length = 142
Score = 29.6 bits (65), Expect = 0.38
Identities = 10/80 (12%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAK--LDLVSDINYVDIMRKKLDPDELGIILLSAFMD 348
+ F +FD G++ IA + + +++ + + + + I F+
Sbjct: 4 KEAFTLFDRTGDSKIALNQVADVMRALGQNPTNAEVKKILGNPSAEEMNAKRIEFEQFLP 63
Query: 349 EFFGDPEKPPPDMFDIFHYN 368
F+ F
Sbjct: 64 MLQATANNKDQGSFEDFVEG 83
>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 139
Score = 29.1 bits (64), Expect = 0.56
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKL 317
+ F++FD G+ I +++ L
Sbjct: 3 KEAFELFDRVGDGKILYSQCGDVMRAL 29
>d1i7da_ e.10.1.1 (A:) DNA topoisomerase III {Escherichia coli
[TaxId: 562]}
Length = 620
Score = 29.6 bits (65), Expect = 0.77
Identities = 5/39 (12%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 317 LDLVSDINYVDIMRKKLDPDELGIILLSAFMDEFFGDPE 355
++L+ ++ + + + G L + E P+
Sbjct: 532 IELLFKRGFLTKKGRYIHSTDAGKALF-HSLPEMATRPD 569
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces
pombe) [TaxId: 4896]}
Length = 140
Score = 28.5 bits (62), Expect = 0.87
Identities = 13/96 (13%), Positives = 24/96 (25%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
++ F +FD G I + +LL + + + L + L
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPN 67
Query: 351 FGDPEKPPPDMFDIFHYNGLARSNYERKVMYRMAHC 386
D P + F + R
Sbjct: 68 GFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLT 103
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica)
[TaxId: 5759]}
Length = 134
Score = 28.5 bits (62), Expect = 0.90
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 290 ARRVFKMFDPDGNNFIASDHLQNLLAK 316
A +FK D +G+ ++ + ++ ++K
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSK 28
>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 190
Score = 28.6 bits (63), Expect = 1.0
Identities = 15/71 (21%), Positives = 26/71 (36%)
Query: 278 KRLACLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDE 337
K+ S D A +F +FD D N FI + +L+ + + + D +
Sbjct: 53 KQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNH 112
Query: 338 LGIILLSAFMD 348
G I +
Sbjct: 113 DGYITFDEMLT 123
>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa
(Obelia longissima), obelin [TaxId: 32570]}
Length = 189
Score = 28.8 bits (63), Expect = 1.0
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 288 DKARRVFKMFDPDGNNFIASDHLQNLLAKLDL 319
+ + +F D +GN I D + + +
Sbjct: 14 KRHKHMFDFLDINGNGKITLDEIVSKASDDIC 45
Score = 26.5 bits (57), Expect = 5.2
Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 5/79 (6%)
Query: 284 ESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILL 343
+ VF +FD DG+ I D + + + + D D G + +
Sbjct: 103 TLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDV 162
Query: 344 SAFMDEFFG-----DPEKP 357
+ G DPE
Sbjct: 163 DEMTRQHLGFWYTLDPEAD 181
>d1hfia_ g.18.1.1 (A:) Factor H, 15th and 16th modules {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 26.5 bits (58), Expect = 1.1
Identities = 9/59 (15%), Positives = 15/59 (25%), Gaps = 9/59 (15%)
Query: 352 GDPEKPPPDMFDIFHYNGLARSNYERKVMYRMAHCVLLECNINCLLETNPMLTCLQTKW 410
P + +G S+ + Y + C + TC KW
Sbjct: 6 SQPPQIE---------HGTINSSRSSQESYAHGTKLSYTCEGGFRISEENETTCYMGKW 55
>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting
protein {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 178
Score = 28.2 bits (62), Expect = 1.3
Identities = 9/68 (13%), Positives = 20/68 (29%)
Query: 274 FSFEKRLACLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKL 333
+ ++ A +F FD + + L+ L + +
Sbjct: 37 KQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLY 96
Query: 334 DPDELGII 341
D ++ G I
Sbjct: 97 DINKDGYI 104
>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus
norvegicus), s100a1 [TaxId: 10116]}
Length = 93
Score = 26.8 bits (59), Expect = 1.8
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 283 LESSADKARRVFKMF-DPDGNN-FIASDHLQNLLAKLDLVS-----DINYVDIMRKKLDP 335
LE++ + VF +G+ ++ L++LL D + VD + K+LD
Sbjct: 4 LETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDE 63
Query: 336 DELGIILLSAFM 347
+ G + F+
Sbjct: 64 NGDGEVDFQEFV 75
>d1gkub3 e.10.1.1 (B:499-1054) Topoisomerase "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 556
Score = 28.4 bits (62), Expect = 1.8
Identities = 9/47 (19%), Positives = 17/47 (36%), Gaps = 8/47 (17%)
Query: 307 SDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEFFGD 353
+ + L NYV ++ P +LGI + F+ +
Sbjct: 479 ATIVDRLF-------MRNYVVEKYGRMIPTKLGID-VFRFLVRRYAK 517
>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal
domain (domain IV) {Rat (Rattus norvegicus), M-type
[TaxId: 10116]}
Length = 186
Score = 27.8 bits (61), Expect = 2.2
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 273 TFSFEKRLACLESSADKARRVFKMFDPDGNNFIASDHLQ 311
F+ + CL + ++FK DP+ I D +
Sbjct: 142 IIDFDNFVRCL-VRLEILFKIFKQLDPENTGTIQLDLIS 179
>d1mw9x_ e.10.1.1 (X:) DNA topoisomerase I, 67K N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 591
Score = 27.9 bits (61), Expect = 3.0
Identities = 7/47 (14%), Positives = 20/47 (42%), Gaps = 8/47 (17%)
Query: 307 SDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEFFGD 353
+ + + D YV + ++ +++G I+ ++E F +
Sbjct: 497 ASIISTIQ-------DRGYVRVENRRFYAEKMGEIVTD-RLEENFRE 535
>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 92
Score = 25.8 bits (56), Expect = 3.6
Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 4/65 (6%)
Query: 285 SSADKAR--RVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIIL 342
+ + FK PD N FI + K I + + + D D+ G +
Sbjct: 4 TDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALT 61
Query: 343 LSAFM 347
L F
Sbjct: 62 LDEFC 66
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 340
Score = 27.4 bits (60), Expect = 4.0
Identities = 16/96 (16%), Positives = 30/96 (31%), Gaps = 13/96 (13%)
Query: 297 FDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLD--PD---------ELGIILLSA 345
PDG ++ L + + + ++ + D D +L +
Sbjct: 213 ISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN 272
Query: 346 FMDEFFGDPEKPPPDMFDIFHYNGLARSNYERKVMY 381
M FF D E PP + + + V+Y
Sbjct: 273 GMRIFFYDAENPPGSE--VLRIQDILSEEPKVTVVY 306
>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain
VI) {Pig (Sus scrofa) [TaxId: 9823]}
Length = 173
Score = 26.8 bits (58), Expect = 4.4
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 288 DKARRVFKMFDPDGNNFIASDHLQ 311
D R FK D DG I + +
Sbjct: 142 DAMFRAFKSLDKDGTGQIQVNIQE 165
>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}
Length = 201
Score = 26.7 bits (58), Expect = 5.2
Identities = 10/64 (15%), Positives = 18/64 (28%)
Query: 278 KRLACLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDE 337
+ A+ VF+ FD + + + L ++ D D
Sbjct: 53 SKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDG 112
Query: 338 LGII 341
G I
Sbjct: 113 NGTI 116
>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop
(Aequipecten irradians) [TaxId: 31199]}
Length = 142
Score = 25.7 bits (55), Expect = 6.4
Identities = 10/103 (9%), Positives = 30/103 (29%), Gaps = 6/103 (5%)
Query: 291 RRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDELGIILLSAFMDEF 350
+ F M D D + F++ + ++ + + D + + G + + F+ F
Sbjct: 10 KEAFSMIDVDRDGFVSKEDIKAISEQ----LGRAPDDKELTAMLKEAPGPLNFTMFLSIF 65
Query: 351 FGDPEKPPPDMF--DIFHYNGLARSNYERKVMYRMAHCVLLEC 391
+ + F + + + +
Sbjct: 66 SDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDN 108
>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2,
GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}
Length = 189
Score = 26.0 bits (56), Expect = 6.7
Identities = 13/63 (20%), Positives = 24/63 (38%)
Query: 279 RLACLESSADKARRVFKMFDPDGNNFIASDHLQNLLAKLDLVSDINYVDIMRKKLDPDEL 338
++ E + +F+ FD +G+N I L + + + + K D D
Sbjct: 49 KVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRN 108
Query: 339 GII 341
G I
Sbjct: 109 GCI 111
>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens),
psoriasin s100a7 [TaxId: 9606]}
Length = 100
Score = 24.9 bits (54), Expect = 9.7
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Query: 283 LESSADKARRVFKMFDPDGNNFIASDHLQNLLAKL-------DLVSDINYVDIMRKKLDP 335
E S +F + ++ I L ++ + NY+ + +K D
Sbjct: 5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDK 63
Query: 336 DELGIILLSAFMD 348
+E I S F+
Sbjct: 64 NEDKKIDFSEFLS 76
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.418
Gapped
Lambda K H
0.267 0.0576 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,643,881
Number of extensions: 78647
Number of successful extensions: 305
Number of sequences better than 10.0: 1
Number of HSP's gapped: 301
Number of HSP's successfully gapped: 86
Length of query: 426
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 338
Effective length of database: 1,199,356
Effective search space: 405382328
Effective search space used: 405382328
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (24.9 bits)