BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17549
(418 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IYG|B Chain B, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
pdb|3KTT|B Chain B, Atomic Model Of Bovine Tric Cct2(Beta) Subunit Derived
From A 4.0 Angstrom Cryo-Em Map
pdb|4A0O|A Chain A, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|B Chain B, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|C Chain C, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|D Chain D, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|E Chain E, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|F Chain F, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|G Chain G, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|H Chain H, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|I Chain I, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|J Chain J, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|K Chain K, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|L Chain L, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|M Chain M, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|N Chain N, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|O Chain O, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0O|P Chain P, Symmetry-Free Cryo-Em Map Of Tric In The Nucleotide-Free
(Apo) State
pdb|4A0V|A Chain A, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|B Chain B, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|C Chain C, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|D Chain D, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|E Chain E, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|F Chain F, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|G Chain G, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|H Chain H, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|I Chain I, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|J Chain J, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|K Chain K, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|L Chain L, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|M Chain M, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|N Chain N, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|O Chain O, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0V|P Chain P, Model Refined Against The Symmetry-Free Cryo-Em Map Of
Tric- Amp-Pnp
pdb|4A0W|A Chain A, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|B Chain B, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|C Chain C, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|D Chain D, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|E Chain E, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|F Chain F, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|G Chain G, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|H Chain H, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|I Chain I, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|J Chain J, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|K Chain K, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|L Chain L, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|M Chain M, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|N Chain N, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|O Chain O, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A0W|P Chain P, Model Built Against Symmetry-Free Cryo-Em Map Of
Tric-Adp-Alfx
pdb|4A13|A Chain A, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|B Chain B, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|C Chain C, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|D Chain D, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|E Chain E, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|F Chain F, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|G Chain G, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|H Chain H, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|I Chain I, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|J Chain J, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|K Chain K, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|L Chain L, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|M Chain M, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|N Chain N, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|O Chain O, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
pdb|4A13|P Chain P, Model Refined Agains Symmetry-Free Cryo-Em Map Of Tric-Adp
Length = 513
Score = 493 bits (1269), Expect = e-140, Method: Compositional matrix adjust.
Identities = 245/340 (72%), Positives = 288/340 (84%), Gaps = 1/340 (0%)
Query: 55 AEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSV 114
A+EE++E AR+SSFIGAIAIGDLVKSTLGPKGMDKIL+S GR++ + +TNDGATILK++
Sbjct: 3 ADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDA-SLMVTNDGATILKNI 61
Query: 115 GVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRAT 174
GVDNPAAK+LVDMS+VQDDEVGDGTTSVTVLA+ELL+ AE LI +++HPQTIIAGWR AT
Sbjct: 62 GVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREAT 121
Query: 175 DIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRLKGSG 234
AR+AL +++D+G + KFR+DL+NIA TTLSSK+L+ HK++F+KLAV+AVLRLKGSG
Sbjct: 122 KAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSG 181
Query: 235 NLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQHQPKRIENAKLLIANTPMDTDKIKVFGS 294
NL AI +IKK GG L DS+LDEGFLLDKKIG +QPKRIENAK+LIANT MDTDKIK+FGS
Sbjct: 182 NLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGS 241
Query: 295 RVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEH 354
RVRVDS +KVE+ILKH N FINRQLIYNYPEQLF AGVMAIEH
Sbjct: 242 RVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEH 301
Query: 355 ADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCL 394
ADF G+ERLALVTGGEI STFD+P+ VKLG C LIEEV +
Sbjct: 302 ADFVGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMI 341
>pdb|3P9D|B Chain B, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|J Chain J, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|BB Chain b, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|JJ Chain j, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|B Chain B, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|J Chain J, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|BB Chain b, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|JJ Chain j, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 527
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/348 (63%), Positives = 276/348 (79%), Gaps = 3/348 (0%)
Query: 48 VRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDG 107
V+I + EE++E AR+S+F+GAIA+GDLVKSTLGPKGMDK+L S N+ V TNDG
Sbjct: 3 VQIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMV--TNDG 60
Query: 108 ATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQ-RLHPQTI 166
ATILKS+ +DNPAAK+LV++SKVQDDEVGDGTTSVTVL++ELL+ AEKLIDQ ++HPQTI
Sbjct: 61 ATILKSIPLDNPAAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTI 120
Query: 167 IAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDA 226
I G+R A+ A AL +A++DN + FREDL++IA+TTLSSKILSQ K++F++LA +A
Sbjct: 121 IEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNA 180
Query: 227 VLRLKGSGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQHQPKRIENAKLLIANTPMDT 286
+LRLKGS NL IQIIK GG L DSFLDEGF+L KK G +QPKRIENAK+LIANT +DT
Sbjct: 181 ILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIANTTLDT 240
Query: 287 DKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFAD 346
DK+K+FG++ +VDS +K+ KI K N FINRQLIY+YPEQLF D
Sbjct: 241 DKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTD 300
Query: 347 AGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCL 394
G+ +IEHADF+G+ERLALVTGGE+VSTFD P + KLG+CD+IEE+ L
Sbjct: 301 LGINSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIML 348
>pdb|3KO1|A Chain A, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|B Chain B, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|C Chain C, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|D Chain D, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|E Chain E, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|F Chain F, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|G Chain G, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|H Chain H, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
pdb|3KO1|I Chain I, Cystal Structure Of Thermosome From Acidianus
Tengchongensis Strain S5
Length = 553
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/352 (34%), Positives = 198/352 (56%), Gaps = 14/352 (3%)
Query: 47 PVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITND 106
PV ILK + + A ++ A+ + +KST GP+GMDK+LV + G + ITND
Sbjct: 15 PVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVD---SLGDITITND 71
Query: 107 GATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTI 166
GATIL + + +PAAK+LV ++K QD+E DGT + + + EL+K AE L+ + +HP I
Sbjct: 72 GATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTII 131
Query: 167 IAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDA 226
I+G+++A ++A + ++E + +N L IA T+LSSK ++ +EY + + V A
Sbjct: 132 ISGYKKAEEVALQTIQELAQTVSINDTDL---LRKIAMTSLSSKAVAGAREYIADIVVKA 188
Query: 227 VLR---LKGSG---NLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLLI 279
V + L+G +L IQI+KK GG + D+ L G ++DK++ PKR+ENAK+ +
Sbjct: 189 VTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIAL 248
Query: 280 ANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNY 339
+ ++ +K + + +R++ +KV+KIL ANV I ++ I
Sbjct: 249 IDASLEVEKPE-LDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEV 307
Query: 340 PEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+ A GV+A+ A +E+LA TGG +VS D + LG LIEE
Sbjct: 308 AQSYLAKKGVLAVRRAKKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEE 359
>pdb|3IYG|A Chain A, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 529
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 117/326 (35%), Positives = 197/326 (60%), Gaps = 16/326 (4%)
Query: 61 EIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPA 120
E R + + A +I ++VKS+LGP G+DK+LV + G V ITNDGATILK + V++PA
Sbjct: 9 EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVD---DIGDVTITNDGATILKLLEVEHPA 65
Query: 121 AKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKA 180
AK+L +++ +QD EVGDGTTSV ++A+ELLKNA++L+ Q++HP ++I+G+R A ++A
Sbjct: 66 AKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLA---CKEA 122
Query: 181 LREASIDNGLNSEKF-REDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRLKGSG----- 234
+R S + +N+++ R+ L+N A+T++SSK++ + ++F+ L VDAVL +K +
Sbjct: 123 VRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQP 182
Query: 235 --NLSAIQIIKKKGGCLEDSFLDEGFLLDKKIG-QHQPKRIENAKLLIANTPMDTDKIKV 291
+++I ++K G +S L G+ L+ +G Q PKRI NAK+ + + K+K
Sbjct: 183 RYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMK- 241
Query: 292 FGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMA 351
G +V + ++++KIL ANV + I + + F +AG MA
Sbjct: 242 LGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMA 301
Query: 352 IEHADFDGIERLALVTGGEIVSTFDN 377
+ ++R+A +G ++ST N
Sbjct: 302 VRRVLKRDLKRIAKASGATVLSTLAN 327
>pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
pdb|1Q3R|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form Of Single Mutant)
Length = 548
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 202/365 (55%), Gaps = 14/365 (3%)
Query: 42 QVSLNPVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQV 101
Q+S PV IL + A+ + + A I + V++TLGPKGMDK+LV + G +
Sbjct: 3 QLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVD---SLGDI 59
Query: 102 EITNDGATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRL 161
+TNDGATIL + + +PAAK++V+++K QD E GDGTT+ V+A ELL+ AE+L+DQ +
Sbjct: 60 VVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNI 119
Query: 162 HPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSK 221
HP I G+ A + A++ L E +I + E E LL IA T+++ K HKE +K
Sbjct: 120 HPSIITKGYALAAEKAQEILDEIAIRVDPDDE---ETLLKIAATSITGKNAESHKELLAK 176
Query: 222 LAVDAVLRL--KGSG----NLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIEN 274
LAV+AV ++ K G +L I+ KK G +E+S L G ++DK++ PKR+EN
Sbjct: 177 LAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEN 236
Query: 275 AKLLIANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQ 334
AK+ + N ++ K + +++ + S D V+ I + ANV ++
Sbjct: 237 AKIALINEALEVKKTET-DAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQK 295
Query: 335 LIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCL 394
I + + A G+MA+ +E+LA TG +IV+ + LG +++EE L
Sbjct: 296 GIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKL 355
Query: 395 WTKNV 399
+N+
Sbjct: 356 AGENM 360
>pdb|1A6D|B Chain B, Thermosome From T. Acidophilum
pdb|1A6E|B Chain B, Thermosome-Mg-Adp-Alf3 Complex
Length = 543
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 204/362 (56%), Gaps = 14/362 (3%)
Query: 46 NPVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITN 105
P+ ILK + E + A + AIAI + V+S+LGP+GMDK+LV + G + ITN
Sbjct: 5 QPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVD---SLGDIVITN 61
Query: 106 DGATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQT 165
DG TILK + V++PAAK++V++SK QD VGDGTT+ ++A LL+ A+ LI+Q +HP
Sbjct: 62 DGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTV 121
Query: 166 IIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVD 225
I G+R A++ A++ + E S G + + LL +A+T+L+SK S K+ ++++ +
Sbjct: 122 ISEGYRMASEEAKRVIDEISTKIGADEKAL---LLKMAQTSLNSKSASVAKDKLAEISYE 178
Query: 226 AVLRL------KGSGNLSAIQIIKKKGGCLEDSFLDEGFLLDK-KIGQHQPKRIENAKLL 278
AV + K + IQ++KK+GG ++D+ L G ++DK K+ P +++AK+
Sbjct: 179 AVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIA 238
Query: 279 IANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYN 338
+ + P++ K + F + +R++ + V+KI ANV I ++ I +
Sbjct: 239 LLDAPLEIKKPE-FDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDD 297
Query: 339 YPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKN 398
+ + AG+ A+ +++LA TG IVST D LG + +E+V +
Sbjct: 298 MAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDY 357
Query: 399 VT 400
+T
Sbjct: 358 MT 359
>pdb|1Q3S|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|E Chain E, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|F Chain F, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|G Chain G, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
pdb|1Q3S|H Chain H, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Formiii Crystal Complexed With Adp)
Length = 548
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 202/365 (55%), Gaps = 14/365 (3%)
Query: 42 QVSLNPVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQV 101
Q+S PV IL + A+ + + A I + V++TLGPKGMDK+LV + G +
Sbjct: 3 QLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVD---SLGDI 59
Query: 102 EITNDGATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRL 161
+TND ATIL + + +PAAK++V+++K QD E GDGTT+ V+A ELL+ AE+L+DQ +
Sbjct: 60 VVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNI 119
Query: 162 HPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSK 221
HP II G+ A + A++ L E +I + E E LL IA T+++ K HKE +K
Sbjct: 120 HPSIIIKGYALAAEKAQEILDEIAIRVDPDDE---ETLLKIAATSITGKNAESHKELLAK 176
Query: 222 LAVDAVLRL--KGSG----NLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIEN 274
LAV+AV ++ K G +L I+ KK G +E+S L G ++DK++ PKR+EN
Sbjct: 177 LAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEN 236
Query: 275 AKLLIANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQ 334
AK+ + N ++ K + +++ + S D V+ I + ANV ++
Sbjct: 237 AKIALINEALEVKKTET-DAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQK 295
Query: 335 LIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCL 394
I + + A G+MA+ +E+LA TG +IV+ + LG +++EE L
Sbjct: 296 GIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKL 355
Query: 395 WTKNV 399
+N+
Sbjct: 356 AGENM 360
>pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q2V|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Nucleotide-Free Form)
pdb|1Q3Q|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|B Chain B, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|C Chain C, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
pdb|1Q3Q|D Chain D, Crystal Structure Of The Chaperonin From Thermococcus
Strain Ks-1 (Two-Point Mutant Complexed With Amp-Pnp)
Length = 548
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 201/365 (55%), Gaps = 14/365 (3%)
Query: 42 QVSLNPVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQV 101
Q+S PV IL + A+ + + A I + V++TLGPKGMDK+LV + G +
Sbjct: 3 QLSGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVD---SLGDI 59
Query: 102 EITNDGATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRL 161
+TND ATIL + + +PAAK++V+++K QD E GDGTT+ V+A ELL+ AE+L+DQ +
Sbjct: 60 VVTNDCATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNI 119
Query: 162 HPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSK 221
HP I G+ A + A++ L E +I + E E LL IA T+++ K HKE +K
Sbjct: 120 HPSIITKGYALAAEKAQEILDEIAIRVDPDDE---ETLLKIAATSITGKNAESHKELLAK 176
Query: 222 LAVDAVLRL--KGSG----NLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIEN 274
LAV+AV ++ K G +L I+ KK G +E+S L G ++DK++ PKR+EN
Sbjct: 177 LAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVEN 236
Query: 275 AKLLIANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQ 334
AK+ + N ++ K + +++ + S D V+ I + ANV ++
Sbjct: 237 AKIALINEALEVKKTET-DAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQK 295
Query: 335 LIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCL 394
I + + A G+MA+ +E+LA TG +IV+ + LG +++EE L
Sbjct: 296 GIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKL 355
Query: 395 WTKNV 399
+N+
Sbjct: 356 AGENM 360
>pdb|3IYG|H Chain H, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 186/344 (54%), Gaps = 10/344 (2%)
Query: 54 EAEEEKSEIARMSSFIGAI-AIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILK 112
E + I ++ S I A I + V++TLGP+GMDK++V GR G+ I+NDGATILK
Sbjct: 2 EGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVD-GR--GKATISNDGATILK 58
Query: 113 SVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRR 172
+ V +PAAK LVD++K QD EVGDGTTSVT+LA+E LK + +++ LHPQ II +R
Sbjct: 59 LLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRT 118
Query: 173 ATDIARKALREASIDNGLNSEKFREDLLN-IARTTLSSKILSQHKEYFSKLAVDAVLRLK 231
AT +A ++E ++ + + LL A T LSSK++SQ K +F+K+ VDAV+ L
Sbjct: 119 ATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLD 178
Query: 232 GSGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIG----QHQPKRIENAKLLIANTPMDTD 287
L I I K +GG LE+S L G K + QPK+ N + + N ++
Sbjct: 179 DLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELEL- 237
Query: 288 KIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADA 347
K + + +RV + DK+EKI A V +++ I + Q FAD
Sbjct: 238 KAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR 297
Query: 348 GVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+ + ++R + GG I ++ + LG+C + EE
Sbjct: 298 DMFCAGRVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEE 341
>pdb|1A6D|A Chain A, Thermosome From T. Acidophilum
pdb|1A6E|A Chain A, Thermosome-Mg-Adp-Alf3 Complex
Length = 545
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 196/354 (55%), Gaps = 20/354 (5%)
Query: 47 PVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITND 106
P+ +LK + E+ + A+ ++ A AI D V++TLGPKGMDK+LV + G + I+ND
Sbjct: 7 PILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVD---SIGDIIISND 63
Query: 107 GATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTI 166
GATILK + V++P AK++V++SK QD VGDGTT+ VL+ ELLK AE L+DQ +HP I
Sbjct: 64 GATILKEMDVEHPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVI 123
Query: 167 IAGWRRATDIARKALREASIDNGLNSEKFRED--LLNIARTTLSSKILSQHKEYFSKL-- 222
G+R A + ARK + E +EK +D L IA T LS K ++ + L
Sbjct: 124 SNGYRLAVNEARKIIDEI-------AEKSTDDATLRKIALTALSGKNTGLSNDFLADLVV 176
Query: 223 -AVDAVLRLKGSGNL---SAIQIIKKKGGCLEDSFLDEGFLLDK-KIGQHQPKRIENAKL 277
AV+AV ++ + + I++ KK GG + D+ G ++DK K+ P ++NAK+
Sbjct: 177 KAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKI 236
Query: 278 LIANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIY 337
+ ++ ++ K ++ ++V++ VEKI K ANV + ++ I
Sbjct: 237 ALIDSALEIKKTEIE-AKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGID 295
Query: 338 NYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+ + A G+ A+ +E+LA TG +IV+ D+ LG+ + +EE
Sbjct: 296 DVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEE 349
>pdb|3P9D|A Chain A, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|I Chain I, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|AA Chain a, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|II Chain i, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|A Chain A, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|I Chain I, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|AA Chain a, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|II Chain i, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 559
Score = 175 bits (443), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 199/375 (53%), Gaps = 38/375 (10%)
Query: 64 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123
R + + +A+ ++VKS+LGP G+DK+LV + G +TNDGATIL + V +PA KI
Sbjct: 26 RNQNVLATMAVANVVKSSLGPVGLDKMLVD---DIGDFTVTNDGATILSLLDVQHPAGKI 82
Query: 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALR- 182
LV++++ QD E+GDGTTSV ++ASELLK A +L+ ++HP TII G+R A R+A+R
Sbjct: 83 LVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVAL---REAIRF 139
Query: 183 -----EASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRLKGSGN-- 235
S+D +E L+NIA+T++SSKI+ ++FS + VDA+L +K +
Sbjct: 140 INEVLSTSVDT-----LGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKG 194
Query: 236 -----LSAIQIIKKKGGCLEDSFLDEGFLLDKKIG-QHQPKRIENAKLLIANTPMDTDKI 289
+ A+ ++K G +S L G+ L+ + Q PKRI + IA ++ K
Sbjct: 195 EIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKA 254
Query: 290 KV-FGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAG 348
++ G ++ +D ++V+KI+ A V + + I + + F +A
Sbjct: 255 RMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK 314
Query: 349 VMAIEHADFDGIERLALVTGGEIVSTFDNP------DQVKLGKCDLI------EEVCLWT 396
+M + + + R+A TG +VS+ N + LG CD + ++ C+
Sbjct: 315 IMGVRRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILI 374
Query: 397 KNVTGPTVSTYSISG 411
K + + S+ + G
Sbjct: 375 KGTSKHSSSSIILRG 389
>pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|B Chain B, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|C Chain C, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|D Chain D, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|E Chain E, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|F Chain F, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|G Chain G, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|H Chain H, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|I Chain I, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|J Chain J, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|K Chain K, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|L Chain L, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|M Chain M, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|N Chain N, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|O Chain O, Atomic Model Of Mm-Cpn In The Closed State
pdb|3LOS|P Chain P, Atomic Model Of Mm-Cpn In The Closed State
pdb|3KFB|A Chain A, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|B Chain B, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|C Chain C, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|D Chain D, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|E Chain E, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|F Chain F, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|G Chain G, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFB|H Chain H, Crystal Structure Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3RUQ|A Chain A, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|B Chain B, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|C Chain C, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUQ|D Chain D, Crystal Structure Of Cpn-Wt In Complex With Adp From
Methanococcus Maripaludis
Length = 543
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 185/332 (55%), Gaps = 12/332 (3%)
Query: 64 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123
RM+ G I I + V+STLGPKGMDK+LV + G V +TNDG TIL+ + V++PAAK+
Sbjct: 22 RMNILAGRI-IAETVRSTLGPKGMDKMLVD---DLGDVVVTNDGVTILREMSVEHPAAKM 77
Query: 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE 183
L++++K Q+ EVGDGTT+ V+A ELL+ AE+L+DQ +HP ++ G++ A A++ L+
Sbjct: 78 LIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKT 137
Query: 184 ASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKL---AVDAVLRLKGSGNLSAIQ 240
+ + G +E L IA T+++ K + KE +++ AV AV+ +G + I+
Sbjct: 138 IACEVGAQD---KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 194
Query: 241 IIKKKGGCLEDSFLDEGFLLDK-KIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVD 299
I KK G ++D+ L +G L+DK ++ PK++ +AK+ + N ++ + + + +R+
Sbjct: 195 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETET-DAEIRIT 253
Query: 300 SXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDG 359
D V +I ANV ++ I + + A G++A
Sbjct: 254 DPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSD 313
Query: 360 IERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+E+LA TG +++ + LG L+EE
Sbjct: 314 MEKLAKATGANVITNIKDLSAQDLGDAGLVEE 345
>pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp
pdb|3IZH|B Chain B, Mm-Cpn D386a With Atp
pdb|3IZH|C Chain C, Mm-Cpn D386a With Atp
pdb|3IZH|D Chain D, Mm-Cpn D386a With Atp
pdb|3IZH|E Chain E, Mm-Cpn D386a With Atp
pdb|3IZH|F Chain F, Mm-Cpn D386a With Atp
pdb|3IZH|G Chain G, Mm-Cpn D386a With Atp
pdb|3IZH|H Chain H, Mm-Cpn D386a With Atp
pdb|3IZH|I Chain I, Mm-Cpn D386a With Atp
pdb|3IZH|J Chain J, Mm-Cpn D386a With Atp
pdb|3IZH|K Chain K, Mm-Cpn D386a With Atp
pdb|3IZH|L Chain L, Mm-Cpn D386a With Atp
pdb|3IZH|M Chain M, Mm-Cpn D386a With Atp
pdb|3IZH|N Chain N, Mm-Cpn D386a With Atp
pdb|3IZH|O Chain O, Mm-Cpn D386a With Atp
pdb|3IZH|P Chain P, Mm-Cpn D386a With Atp
pdb|3IZM|A Chain A, Mm-Cpn Wildtype With Atp
pdb|3IZM|B Chain B, Mm-Cpn Wildtype With Atp
pdb|3IZM|C Chain C, Mm-Cpn Wildtype With Atp
pdb|3IZM|D Chain D, Mm-Cpn Wildtype With Atp
pdb|3IZM|E Chain E, Mm-Cpn Wildtype With Atp
pdb|3IZM|F Chain F, Mm-Cpn Wildtype With Atp
pdb|3IZM|G Chain G, Mm-Cpn Wildtype With Atp
pdb|3IZM|H Chain H, Mm-Cpn Wildtype With Atp
pdb|3IZM|I Chain I, Mm-Cpn Wildtype With Atp
pdb|3IZM|J Chain J, Mm-Cpn Wildtype With Atp
pdb|3IZM|K Chain K, Mm-Cpn Wildtype With Atp
pdb|3IZM|L Chain L, Mm-Cpn Wildtype With Atp
pdb|3IZM|M Chain M, Mm-Cpn Wildtype With Atp
pdb|3IZM|N Chain N, Mm-Cpn Wildtype With Atp
pdb|3IZM|O Chain O, Mm-Cpn Wildtype With Atp
pdb|3IZM|P Chain P, Mm-Cpn Wildtype With Atp
Length = 513
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 185/332 (55%), Gaps = 12/332 (3%)
Query: 64 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123
RM+ G I I + V+STLGPKGMDK+LV + G V +TNDG TIL+ + V++PAAK+
Sbjct: 16 RMNILAGRI-IAETVRSTLGPKGMDKMLVD---DLGDVVVTNDGVTILREMSVEHPAAKM 71
Query: 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE 183
L++++K Q+ EVGDGTT+ V+A ELL+ AE+L+DQ +HP ++ G++ A A++ L+
Sbjct: 72 LIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKT 131
Query: 184 ASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKL---AVDAVLRLKGSGNLSAIQ 240
+ + G +E L IA T+++ K + KE +++ AV AV+ +G + I+
Sbjct: 132 IACEVGAQD---KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 188
Query: 241 IIKKKGGCLEDSFLDEGFLLDK-KIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVD 299
I KK G ++D+ L +G L+DK ++ PK++ +AK+ + N ++ + + + +R+
Sbjct: 189 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETET-DAEIRIT 247
Query: 300 SXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDG 359
D V +I ANV ++ I + + A G++A
Sbjct: 248 DPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSD 307
Query: 360 IERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+E+LA TG +++ + LG L+EE
Sbjct: 308 MEKLAKATGANVITNIKDLSAQDLGDAGLVEE 339
>pdb|3P9D|G Chain G, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|O Chain O, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|GG Chain g, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|OO Chain o, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|G Chain G, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|O Chain O, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|GG Chain g, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|OO Chain o, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 550
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 186/346 (53%), Gaps = 15/346 (4%)
Query: 54 EAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKS 113
+A + K +I +S+ +A+ + +K TLGP G D ++V+ + + I+NDGATILK
Sbjct: 18 DASQGKGQI--ISNINACVAVQEALKPTLGPLGSDILIVTSNQ---KTTISNDGATILKL 72
Query: 114 VGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRA 173
+ V +PAAK LVD+S+ QD EVGDGTTSVT+LA EL+K A+ +++ + I+ G+R+A
Sbjct: 73 LDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKA 132
Query: 174 TDIARKALREASIDNGLNSEKF--REDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRL- 230
+A + + E ++D + SEK RE L ART +SSK++ + ++F K+ VDAVL L
Sbjct: 133 VSLAVEKINELAVD--ITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLD 190
Query: 231 KGSGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIG----QHQPKRIENAKLLIANTPMDT 286
+ + I I K GG +E+S G K + QPK+ N K+L N ++
Sbjct: 191 RNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELEL 250
Query: 287 DKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFAD 346
K + + VRV+ +K+ ++ + AN+ +++ I + Q FAD
Sbjct: 251 -KAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFAD 309
Query: 347 AGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEV 392
+ D + R+ GG I ST + LG C L EE+
Sbjct: 310 RNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEM 355
>pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUS|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Adp From
Methanococcus Maripaludis
pdb|3RUV|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUV|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Atp Analogue
From Methanococcus Maripaludis
pdb|3RUW|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|B Chain B, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|C Chain C, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
pdb|3RUW|D Chain D, Crystal Structure Of Cpn-Rls In Complex With Adp-Alfx From
Methanococcus Maripaludis
Length = 543
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 184/332 (55%), Gaps = 12/332 (3%)
Query: 64 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123
RM+ G I I + V+STLGPKGMDK+LV + G V +TNDG TIL+ + V++PAAK+
Sbjct: 22 RMNILAGRI-IAETVRSTLGPKGMDKMLVD---DLGDVVVTNDGVTILREMSVEHPAAKM 77
Query: 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE 183
L++++K Q+ EVGDGTT+ V+A ELL+ AE+L+DQ +HP ++ G++ A A++ L+
Sbjct: 78 LIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKT 137
Query: 184 ASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKL---AVDAVLRLKGSGNLSAIQ 240
+ + G +E L IA T+++ K + KE +++ AV AV+ +G + I+
Sbjct: 138 IACEVGAQD---KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 194
Query: 241 IIKKKGGCLEDSFLDEGFLLDK-KIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVD 299
I KK G ++D+ L +G L+DK ++ PK++ +AK+ + N ++ + + + +R+
Sbjct: 195 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETET-DAEIRIT 253
Query: 300 SXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDG 359
D V +I ANV ++ I + + A G++A
Sbjct: 254 DPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSD 313
Query: 360 IERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+E+LA TG +++ LG L+EE
Sbjct: 314 MEKLAKATGANVIAAIAALSAQDLGDAGLVEE 345
>pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp
pdb|3IZI|B Chain B, Mm-Cpn Rls With Atp
pdb|3IZI|C Chain C, Mm-Cpn Rls With Atp
pdb|3IZI|D Chain D, Mm-Cpn Rls With Atp
pdb|3IZI|E Chain E, Mm-Cpn Rls With Atp
pdb|3IZI|F Chain F, Mm-Cpn Rls With Atp
pdb|3IZI|G Chain G, Mm-Cpn Rls With Atp
pdb|3IZI|H Chain H, Mm-Cpn Rls With Atp
pdb|3IZI|I Chain I, Mm-Cpn Rls With Atp
pdb|3IZI|J Chain J, Mm-Cpn Rls With Atp
pdb|3IZI|K Chain K, Mm-Cpn Rls With Atp
pdb|3IZI|L Chain L, Mm-Cpn Rls With Atp
pdb|3IZI|M Chain M, Mm-Cpn Rls With Atp
pdb|3IZI|N Chain N, Mm-Cpn Rls With Atp
pdb|3IZI|O Chain O, Mm-Cpn Rls With Atp
pdb|3IZI|P Chain P, Mm-Cpn Rls With Atp
pdb|3IZJ|A Chain A, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|B Chain B, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|C Chain C, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|D Chain D, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|E Chain E, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|F Chain F, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|G Chain G, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|H Chain H, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|I Chain I, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|J Chain J, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|K Chain K, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|L Chain L, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|M Chain M, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|N Chain N, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|O Chain O, Mm-Cpn Rls With Atp And Alfx
pdb|3IZJ|P Chain P, Mm-Cpn Rls With Atp And Alfx
Length = 513
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 184/332 (55%), Gaps = 12/332 (3%)
Query: 64 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123
RM+ G I I + V+STLGPKGMDK+LV + G V +TNDG TIL+ + V++PAAK+
Sbjct: 16 RMNILAGRI-IAETVRSTLGPKGMDKMLVD---DLGDVVVTNDGVTILREMSVEHPAAKM 71
Query: 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE 183
L++++K Q+ EVGDGTT+ V+A ELL+ AE+L+DQ +HP ++ G++ A A++ L+
Sbjct: 72 LIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKT 131
Query: 184 ASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKL---AVDAVLRLKGSGNLSAIQ 240
+ + G +E L IA T+++ K + KE +++ AV AV+ +G + I+
Sbjct: 132 IACEVGAQD---KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 188
Query: 241 IIKKKGGCLEDSFLDEGFLLDK-KIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVD 299
I KK G ++D+ L +G L+DK ++ PK++ +AK+ + N ++ + + + +R+
Sbjct: 189 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETET-DAEIRIT 247
Query: 300 SXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDG 359
D V +I ANV ++ I + + A G++A
Sbjct: 248 DPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSD 307
Query: 360 IERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+E+LA TG +++ LG L+EE
Sbjct: 308 MEKLAKATGANVIAAIAALSAQDLGDAGLVEE 339
>pdb|3P9D|E Chain E, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|M Chain M, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|EE Chain e, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|MM Chain m, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|E Chain E, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|M Chain M, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|EE Chain e, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|MM Chain m, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 562
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 196/383 (51%), Gaps = 19/383 (4%)
Query: 23 PTKPTLQILPKFFDSCFTFQVSLNPVRILKHEAEEEKSE--IARMSSFIGAIAIGDLVKS 80
P +P ++ +P ++ P I+K + +++ A+ S + A ++ ++K+
Sbjct: 5 PQQPPME-MPDLSNAIVAQDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKT 63
Query: 81 TLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQDDEVGDGTT 140
+LGP+G+DKIL+S G++ ITNDGATIL + +DN AK+LV +SK QDDE+GDGTT
Sbjct: 64 SLGPRGLDKILIS---PDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTT 120
Query: 141 SVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASID-NGLNSEKFREDL 199
V VLAS LL A +LI + +HP I G+ A +A L E D + N E FR+ L
Sbjct: 121 GVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFL 180
Query: 200 LNIARTTLSSKILSQHKEYFSKLAVDAVLRL----KGSGNLSAIQIIKKKGGCLEDSFLD 255
L A+T+L SKI+S+ + F+++AV+AV+ + + + I++ + GG + DS L
Sbjct: 181 LRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLI 240
Query: 256 EGFLLDKKIGQHQ-PKRI------ENAKLLIANTPMDTDKIKVFGSRVRVDSXXXXXXXX 308
G +LDK Q PK + + KL I P + K K ++ + S
Sbjct: 241 NGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKT-KHKLDISSVEEYQKLQ 299
Query: 309 XXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTG 368
+ ++ + K A+V I + + L + A+ +E +A+ T
Sbjct: 300 TYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIAISTN 359
Query: 369 GEIVSTFDNPDQVKLGKCDLIEE 391
G IV F + + KLG C I E
Sbjct: 360 GRIVPRFQDLSKDKLGTCSRIYE 382
>pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|B Chain B, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|C Chain C, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|D Chain D, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|E Chain E, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|F Chain F, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|G Chain G, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|H Chain H, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|I Chain I, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|J Chain J, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|K Chain K, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|L Chain L, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|M Chain M, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|N Chain N, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|O Chain O, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
pdb|3J02|P Chain P, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State
Length = 491
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 181/332 (54%), Gaps = 34/332 (10%)
Query: 64 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123
RM+ G I I + V+STLGPKGMDK+LV + G V +TNDG TIL+ + V++PAAK+
Sbjct: 16 RMNILAGRI-IAETVRSTLGPKGMDKMLVD---DLGDVVVTNDGVTILREMSVEHPAAKM 71
Query: 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE 183
L++++K Q+ EVGDGTT+ V+A ELL+ AE+L+DQ +HP ++ G++ A A++ L+
Sbjct: 72 LIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKT 131
Query: 184 ASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKL---AVDAVLRLKGSGNLSAIQ 240
+ + G +E L IA T+++ K + KE +++ AV AV+ +G + I+
Sbjct: 132 IACEVGAQD---KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 188
Query: 241 IIKKKGGCLEDSFLDEGFLLDK-KIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVD 299
I KK G ++D+ L +G L+DK ++ PK++ +AK+ + N ++ ++
Sbjct: 189 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEML------- 241
Query: 300 SXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDG 359
D V +I ANV ++ I + + A G++A
Sbjct: 242 ----------------KDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSD 285
Query: 360 IERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+E+LA TG +++ + LG L+EE
Sbjct: 286 MEKLAKATGANVITNIKDLSAQDLGDAGLVEE 317
>pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp
pdb|3IZN|B Chain B, Mm-Cpn Deltalid With Atp
pdb|3IZN|C Chain C, Mm-Cpn Deltalid With Atp
pdb|3IZN|D Chain D, Mm-Cpn Deltalid With Atp
pdb|3IZN|E Chain E, Mm-Cpn Deltalid With Atp
pdb|3IZN|F Chain F, Mm-Cpn Deltalid With Atp
pdb|3IZN|G Chain G, Mm-Cpn Deltalid With Atp
pdb|3IZN|H Chain H, Mm-Cpn Deltalid With Atp
pdb|3IZN|I Chain I, Mm-Cpn Deltalid With Atp
pdb|3IZN|J Chain J, Mm-Cpn Deltalid With Atp
pdb|3IZN|K Chain K, Mm-Cpn Deltalid With Atp
pdb|3IZN|L Chain L, Mm-Cpn Deltalid With Atp
pdb|3IZN|M Chain M, Mm-Cpn Deltalid With Atp
pdb|3IZN|N Chain N, Mm-Cpn Deltalid With Atp
pdb|3IZN|O Chain O, Mm-Cpn Deltalid With Atp
pdb|3IZN|P Chain P, Mm-Cpn Deltalid With Atp
pdb|3J03|A Chain A, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|B Chain B, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|C Chain C, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|D Chain D, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|E Chain E, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|F Chain F, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|G Chain G, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|H Chain H, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|I Chain I, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|J Chain J, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|K Chain K, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|L Chain L, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|M Chain M, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|N Chain N, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|O Chain O, Lidless Mm-Cpn In The Closed State With AtpALFX
pdb|3J03|P Chain P, Lidless Mm-Cpn In The Closed State With AtpALFX
Length = 491
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 181/332 (54%), Gaps = 34/332 (10%)
Query: 64 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123
RM+ G I I + V+STLGPKGMDK+LV + G V +TNDG TIL+ + V++PAAK+
Sbjct: 16 RMNILAGRI-IAETVRSTLGPKGMDKMLVD---DLGDVVVTNDGVTILREMSVEHPAAKM 71
Query: 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE 183
L++++K Q+ EVGDGTT+ V+A ELL+ AE+L+DQ +HP ++ G++ A A++ L+
Sbjct: 72 LIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKT 131
Query: 184 ASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKL---AVDAVLRLKGSGNLSAIQ 240
+ + G +E L IA T+++ K + KE +++ AV AV+ +G + I+
Sbjct: 132 IACEVGAQD---KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 188
Query: 241 IIKKKGGCLEDSFLDEGFLLDK-KIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVD 299
I KK G ++D+ L +G L+DK ++ PK++ +AK+ + N ++ ++
Sbjct: 189 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEML------- 241
Query: 300 SXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDG 359
D V +I ANV ++ I + + A G++A
Sbjct: 242 ----------------KDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSD 285
Query: 360 IERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+E+LA TG +++ + LG L+EE
Sbjct: 286 MEKLAKATGANVITNIKDLSAQDLGDAGLVEE 317
>pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|B Chain B, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|C Chain C, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|D Chain D, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|E Chain E, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|F Chain F, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|G Chain G, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|H Chain H, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|I Chain I, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|J Chain J, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|K Chain K, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|L Chain L, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|M Chain M, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|N Chain N, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|O Chain O, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3IYF|P Chain P, Atomic Model Of The Lidless Mm-Cpn In The Open State
pdb|3KFE|A Chain A, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|B Chain B, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|C Chain C, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|D Chain D, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|E Chain E, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|F Chain F, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|G Chain G, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFE|H Chain H, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|A Chain A, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|B Chain B, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|C Chain C, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
pdb|3KFK|D Chain D, Crystal Structures Of A Group Ii Chaperonin From
Methanococcus Maripaludis
Length = 521
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 181/332 (54%), Gaps = 34/332 (10%)
Query: 64 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123
RM+ G I I + V+STLGPKGMDK+LV + G V +TNDG TIL+ + V++PAAK+
Sbjct: 22 RMNILAGRI-IAETVRSTLGPKGMDKMLVD---DLGDVVVTNDGVTILREMSVEHPAAKM 77
Query: 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE 183
L++++K Q+ EVGDGTT+ V+A ELL+ AE+L+DQ +HP ++ G++ A A++ L+
Sbjct: 78 LIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKT 137
Query: 184 ASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKL---AVDAVLRLKGSGNLSAIQ 240
+ + G +E L IA T+++ K + KE +++ AV AV+ +G + I+
Sbjct: 138 IACEVGAQD---KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 194
Query: 241 IIKKKGGCLEDSFLDEGFLLDK-KIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVD 299
I KK G ++D+ L +G L+DK ++ PK++ +AK+ + N ++ ++
Sbjct: 195 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEML------- 247
Query: 300 SXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDG 359
D V +I ANV ++ I + + A G++A
Sbjct: 248 ----------------KDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSD 291
Query: 360 IERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+E+LA TG +++ + LG L+EE
Sbjct: 292 MEKLAKATGANVITNIKDLSAQDLGDAGLVEE 323
>pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|B Chain B, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|C Chain C, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|D Chain D, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|E Chain E, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|F Chain F, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|G Chain G, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|H Chain H, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|I Chain I, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|J Chain J, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|K Chain K, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|L Chain L, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|M Chain M, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|N Chain N, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|O Chain O, Mm-Cpn Rls Deltalid With Atp
pdb|3IZK|P Chain P, Mm-Cpn Rls Deltalid With Atp
pdb|3IZL|A Chain A, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|B Chain B, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|C Chain C, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|D Chain D, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|E Chain E, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|F Chain F, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|G Chain G, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|H Chain H, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|I Chain I, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|J Chain J, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|K Chain K, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|L Chain L, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|M Chain M, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|N Chain N, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|O Chain O, Mm-Cpn Rls Deltalid With Atp And Alfx
pdb|3IZL|P Chain P, Mm-Cpn Rls Deltalid With Atp And Alfx
Length = 491
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/332 (32%), Positives = 180/332 (54%), Gaps = 34/332 (10%)
Query: 64 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123
RM+ G I I + V+STLGPKGMDK+LV + G V +TNDG TIL+ + V++PAAK+
Sbjct: 16 RMNILAGRI-IAETVRSTLGPKGMDKMLVD---DLGDVVVTNDGVTILREMSVEHPAAKM 71
Query: 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE 183
L++++K Q+ EVGDGTT+ V+A ELL+ AE+L+DQ +HP ++ G++ A A++ L+
Sbjct: 72 LIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKT 131
Query: 184 ASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKL---AVDAVLRLKGSGNLSAIQ 240
+ + G +E L IA T+++ K + KE +++ AV AV+ +G + I+
Sbjct: 132 IACEVGAQD---KEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIK 188
Query: 241 IIKKKGGCLEDSFLDEGFLLDK-KIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVD 299
I KK G ++D+ L +G L+DK ++ PK++ +AK+ + N ++ ++
Sbjct: 189 IEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEETASEML------- 241
Query: 300 SXXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDG 359
D V +I ANV ++ I + + A G++A
Sbjct: 242 ----------------KDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSD 285
Query: 360 IERLALVTGGEIVSTFDNPDQVKLGKCDLIEE 391
+E+LA TG +++ LG L+EE
Sbjct: 286 MEKLAKATGANVIAAIAALSAQDLGDAGLVEE 317
>pdb|3IYG|E Chain E, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 115/336 (34%), Positives = 182/336 (54%), Gaps = 10/336 (2%)
Query: 66 SSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILV 125
S + A A+ + +K++LGP G+DK++V G V +TNDGATIL + VD+ AK++V
Sbjct: 14 SHIMAAKAVANTMKTSLGPNGLDKMMVD---KDGDVTVTNDGATILSMMDVDHQIAKLMV 70
Query: 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREAS 185
++SK QDDE+GDGTT V VLA LL+ AE+L+D+ +HP I G+ +A IA + L + S
Sbjct: 71 ELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKIS 130
Query: 186 IDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRL----KGSGNLSAIQI 241
D+ L K E L+ A+TTL SK+++ +++AV+AVL + + + I++
Sbjct: 131 -DSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKV 189
Query: 242 IKKKGGCLEDSFLDEGFLLDKKIGQHQ-PKRIENAKLLIANTPMDTDKIKVFGSRVRVDS 300
K GG LED+ L +G ++DK Q PK++E+AK+ I P + K K ++ V S
Sbjct: 190 EGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKT-KHKLDVTS 248
Query: 301 XXXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGI 360
+ + +I + AN+ + + + L + A+ I
Sbjct: 249 VEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEI 308
Query: 361 ERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWT 396
E +A+ TGG IV F KLG L++E+ T
Sbjct: 309 ELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGT 344
>pdb|3IYG|D Chain D, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 518
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 182/346 (52%), Gaps = 27/346 (7%)
Query: 64 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123
R S+ A A+ D ++++LGPKGMDK ++ G+ G V ITNDGATILK + V +PAA++
Sbjct: 13 RFSNISAAKAVADAIRTSLGPKGMDK-MIQDGK--GDVTITNDGATILKQMQVLHPAARM 69
Query: 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE 183
LV++SK QD E GDGTTSV ++A LL + KL+ + +HP I +++A + + L +
Sbjct: 70 LVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTD 129
Query: 184 ASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRL-----KGSGNLSA 238
S L+ RE LLN A T+L+SK++SQ+ S ++VDAV+++ S +L
Sbjct: 130 MSRPVELSD---RETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRD 186
Query: 239 IQIIKKKGGCLEDSFLDEGFLLDKKIGQHQPKRIENAKL-----LIANTPMDTDKIKVFG 293
I+I+KK GG ++D L EG +L +K+ R+E AK+ ++ D D V
Sbjct: 187 IKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVS 246
Query: 294 SRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVF-----INRQLIYNYPEQLFADAG 348
V++D + V++I K NV I R + +
Sbjct: 247 DYVQMDR------VLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMK 300
Query: 349 VMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCL 394
+M ++ + + IE + G + V+ D LG +L EEV L
Sbjct: 301 IMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSL 346
>pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From
Methanococcoides Burtonii
Length = 500
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 159/301 (52%), Gaps = 12/301 (3%)
Query: 99 GQVEITNDGATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLID 158
G + ITNDGATILK + + +PAAK++V++SK QD EVGDGTT+ VL+ ELL AE+LI
Sbjct: 7 GDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIM 66
Query: 159 QRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEY 218
+ +H I G+R A + R+ L +I + E L+ IA T ++ K +KE
Sbjct: 67 KGVHSTIISEGYRHAAEKCREILETITIAISPDDEAA---LIKIAGTAITGKGAEAYKEK 123
Query: 219 FSKLAVDAVLRLKGSGN-------LSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPK 270
S L V AV + L I+I K+ GG ++DS L +G ++DK+ + P+
Sbjct: 124 LSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHPNMPE 183
Query: 271 RIENAKLLIANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVF 330
++ENAK+L+ + P++ K +V S +++ S + EK++ ANV
Sbjct: 184 KVENAKILLLSCPVEFRKTEV-DSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVV 242
Query: 331 INRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIE 390
++ I + + AG+ A+ ++RL+ VTG I+ D +G L+E
Sbjct: 243 FCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVE 302
Query: 391 E 391
E
Sbjct: 303 E 303
>pdb|3P9D|D Chain D, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|L Chain L, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|DD Chain d, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|LL Chain l, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|D Chain D, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|L Chain L, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|DD Chain d, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|LL Chain l, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 528
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 145/232 (62%), Gaps = 22/232 (9%)
Query: 57 EEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGV 116
+EK + R ++ I A ++ D ++++LGPKGMDK++ + + G++ I+NDG TILK + +
Sbjct: 14 KEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKT---SRGEIIISNDGHTILKQMAI 70
Query: 117 DNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIA-----GWR 171
+P A++LV++S QD E GDGTTSV +L LL AE+L+++ +HP TIIA +
Sbjct: 71 LHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHP-TIIADSFQSAAK 129
Query: 172 RATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRLK 231
R+ DI + + S+ + RE L+ A T+LSSKI+SQ+ + + LAVD+VL++
Sbjct: 130 RSVDILLEMCHKVSLSD-------REQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKIS 182
Query: 232 GSG----NLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQHQ--PKRIENAKL 277
+L+ I+++KK GG ++D+ + +G +L + + P R E AK+
Sbjct: 183 DENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKI 234
>pdb|3IYG|Z Chain Z, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 517
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 175/343 (51%), Gaps = 32/343 (9%)
Query: 59 KSEIARMSSFIG-----AIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKS 113
K+E+AR + + A + D++++ LGPKG K+LVS +G +++T DG +L
Sbjct: 2 KAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVS---GAGDIKLTKDGNVLLHE 58
Query: 114 VGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRA 173
+ + +P A ++ ++ QDD GDGTTS ++ ELLK A+ I + LHP+ I G+ A
Sbjct: 59 MQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAA 118
Query: 174 TDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRLKGS 233
+ A + L + + + E RE L+++ART+L +K+ ++ + ++ VD++L +K
Sbjct: 119 KEKALQFLEQVKV----SKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQ 174
Query: 234 G---NLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQHQP---KRIENAKLLIANTPMDTD 287
+L ++I++ K D+ L G +LD G P KR+E+A +L N ++ +
Sbjct: 175 DEPIDLFMVEIMEMKHKSETDTSLIRGLVLDH--GARHPDMKKRVEDAYILTCNVSLEYE 232
Query: 288 KIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNAN---------VFINRQLIYN 338
K +V S S D+V+KI++ V IN++ I
Sbjct: 233 KTEV-NSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDP 291
Query: 339 YPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFD--NPD 379
+ A G++A+ A +ERL L GG +++ D NPD
Sbjct: 292 FSLDALAKEGIIALRRAKRRNMERLTLACGGIALNSLDDLNPD 334
>pdb|3IYG|G Chain G, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 515
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 168/321 (52%), Gaps = 18/321 (5%)
Query: 70 GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSK 129
A I D++++ LGPK M K+L+ G + +TNDG IL+ + V +PAAK ++++S+
Sbjct: 17 AAKTIADIIRTCLGPKSMMKMLLD---PMGGIVMTNDGNAILREIQVQHPAAKSMIEISR 73
Query: 130 VQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNG 189
QD+EVGDGTTSV +LA E+L AE ++Q++HP +I+ +R+A D L++ SI
Sbjct: 74 TQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVD 133
Query: 190 LNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRLKGSGNLSAIQIIKK----- 244
++ R+ +LNI +++++K++S+ +A+DAV ++ N IKK
Sbjct: 134 TSN---RDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVE 190
Query: 245 --KGGCLEDSFLDEGFLLDKKIGQHQPKR-IENAKLLIANTPMDTDKIKVFGSRVRVDSX 301
GG +EDS + G +++K + + +R I+N ++++ ++ ++ K + + + +
Sbjct: 191 KIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGE-SQTDIEITRE 249
Query: 302 XXXXXXXXXXXXXXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIE 361
E I++ +V I + I + + A + AI
Sbjct: 250 EDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNN 309
Query: 362 RLALVTGGEIVSTFDNPDQVK 382
R+A G IVS P++++
Sbjct: 310 RIARACGARIVS---RPEELR 327
>pdb|3P9D|F Chain F, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|N Chain N, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|FF Chain f, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|NN Chain n, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|F Chain F, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|N Chain N, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|FF Chain f, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|NN Chain n, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 546
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 186/392 (47%), Gaps = 28/392 (7%)
Query: 48 VRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDG 107
+++L +AE + + A + A + ++++ LGPKG K+LV +G +++T DG
Sbjct: 3 LQLLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVD---GAGNIKLTKDG 59
Query: 108 ATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTII 167
+L + + +P A ++ + QD+ GDGTT+V L ELL+ A + I + +HP+ I
Sbjct: 60 KVLLTEMQIQSPTAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIIT 119
Query: 168 AGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAV 227
G+ A + K L E I + N RE LL +AR++L +K+ + E + + DAV
Sbjct: 120 DGFEIARKESMKFLDEFKI-SKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAV 178
Query: 228 LRLKGSG----NLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQH--QPKRIENAKLLIAN 281
L + + +L ++I++ + +D+ +G +LD G+H P R++NA +LI N
Sbjct: 179 LSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHG-GRHPDMPTRVKNAYVLILN 237
Query: 282 TPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILK----------HNANVFI 331
++ +K +V S S K++KI+ V I
Sbjct: 238 VSLEYEKTEV-NSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVII 296
Query: 332 NRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLI-- 389
N++ I +FA ++A+ A +ERL LVTGGE ++ ++ LG L+
Sbjct: 297 NQKGIDPMSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQ 356
Query: 390 ----EEVCLWTKNVTGPTVSTYSISGFRYIGI 417
EE + T P T I G + +
Sbjct: 357 ETIGEEKFTYVTENTDPKSCTILIKGSTHYAL 388
>pdb|3P9D|C Chain C, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|K Chain K, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|CC Chain c, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|KK Chain k, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|C Chain C, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|K Chain K, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|CC Chain c, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|KK Chain k, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 590
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 175/358 (48%), Gaps = 23/358 (6%)
Query: 47 PVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITND 106
PV + E A++S+ A A+ D++++ LGPK M K+L+ G + +TND
Sbjct: 4 PVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLD---PMGGLVLTND 60
Query: 107 GATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELL-KNAEKLIDQRLHPQT 165
G IL+ + V +PAAK ++++S+ QD+EVGDGTT+V +LA E+L + A LI++ +HP
Sbjct: 61 GHAILREIDVAHPAAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVI 120
Query: 166 IIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVD 225
II ++A A + +++ S + ++ + L+ + ++ +K + E +LA+D
Sbjct: 121 IIQALKKALTDALEVIKQVSKPVDVENDAAMKKLI---QASIGTKYVIHWSEKMCELALD 177
Query: 226 AVLRLK--------GSGNLS-----AIQIIKKKGGCLEDSFLDEGFLLDKKIGQHQPKR- 271
AV ++ G N +++ K GG + DS + +G LL+K + + R
Sbjct: 178 AVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRH 237
Query: 272 IENAKLLIANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXXXDKVEKILKHNANVFI 331
IEN ++++ + P++ K + + + ++ E+IL + I
Sbjct: 238 IENPRVVLLDCPLEYKKGE-SQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVI 296
Query: 332 NRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLG-KCDL 388
+ + + + G + R+A VTG IV+ ++ + +G C L
Sbjct: 297 TEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGL 354
>pdb|3P9D|H Chain H, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9D|P Chain P, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|HH Chain h, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|3P9E|PP Chain p, The Crystal Structure Of Yeast Cct Reveals Intrinsic
Asymmetry Of Eukaryotic Cytosolic Chaperonins
pdb|4D8Q|H Chain H, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8Q|P Chain P, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|HH Chain h, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
pdb|4D8R|PP Chain p, Molecular Architecture Of The Eukaryotic Chaperonin
TricCCT DERIVED By A Combination Of Chemical
Crosslinking And Mass-Spectrometry, Xl- Ms
Length = 568
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 121/226 (53%), Gaps = 16/226 (7%)
Query: 80 STLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQDDEVGDGT 139
+++GP G +KI+V+ + G++ ITND AT+L+ + + +PA K+LV ++ Q ++GDGT
Sbjct: 44 TSMGPCGRNKIIVN---HLGKIIITNDAATMLRELDIVHPAVKVLVMATEQQKIDMGDGT 100
Query: 140 TSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDL 199
V +LA ELL +EKLI L II G+ A K L E + + + + +L
Sbjct: 101 NLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGE-ITDKNDKNEL 159
Query: 200 LNIARTTLSSKILSQHKEYFSKLAVDAVLRL----KGSG-----NLSAIQIIKKKGGCLE 250
L + + +SSK ++ S+L +AV + + +G N+ +I+++K GG L
Sbjct: 160 LKMIKPVISSKKYGS-EDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLS 218
Query: 251 DSFLDEGFLLDKKIGQHQPKRIENAKLLIA--NTPMDTDKIKVFGS 294
+S + +G + +++ H E+ K +A P+D + G+
Sbjct: 219 NSTVIKGMVFNREPEGHVKSLSEDKKHKVAVFTCPLDIANTETKGT 264
>pdb|3IYG|Q Chain Q, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM
Cryo-Em Map
Length = 512
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 143/316 (45%), Gaps = 14/316 (4%)
Query: 79 KSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQDDEVGDG 138
++ GP GM+K++++ + ++ +TND ATIL+ + V +PAAK++V S +Q+ EVGDG
Sbjct: 28 RTAYGPNGMNKMVIN---HLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDG 84
Query: 139 TTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFRED 198
T V V A LL+ AE+L+ L +I G+ +IA K E D S K D
Sbjct: 85 TNFVLVFAGALLELAEELLRLGLSVSEVIEGY----EIACKKAHEILPDLVCCSAKNLRD 140
Query: 199 LLNIARTTLSSKILSQH--KEYFSKLAVDAVLRL---KGSGNLSAIQIIKKKGGCLEDSF 253
+ ++ +S + Q+ + + +KL A + + G N+ I++ K G + S
Sbjct: 141 VDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSS 200
Query: 254 LDEGFLLDKKIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXX 313
+ G + KK + +++AK+ + + P D + G+ V + S
Sbjct: 201 VLHGMVF-KKETEGDVTSVKDAKIAVYSCPFDGMITETKGT-VLIKSAEELMNFSKGEEN 258
Query: 314 XXXDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVS 373
+V+ I ANV + + + +M + + RL G +
Sbjct: 259 LMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALP 318
Query: 374 TFDNPDQVKLGKCDLI 389
+ P ++G CD +
Sbjct: 319 RLNPPVLEEMGHCDSV 334
>pdb|3RTK|A Chain A, Crystal Structure Of Cpn60.2 From Mycobacterium
Tuberculosis At 2.8a
pdb|3RTK|B Chain B, Crystal Structure Of Cpn60.2 From Mycobacterium
Tuberculosis At 2.8a
Length = 546
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 61 EIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNP- 119
E AR G A+ D VK TLGPKG + +L + G ITNDG +I K + +++P
Sbjct: 9 EEARRGLERGLNALADAVKVTLGPKGRNVVLE---KKWGAPTITNDGVSIAKEIELEDPY 65
Query: 120 ---AAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATD 175
A+++ +++K DD GDGTT+ TVLA L++ + + +P + G +A +
Sbjct: 66 EKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVE 124
>pdb|1WE3|A Chain A, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|B Chain B, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|C Chain C, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|D Chain D, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|E Chain E, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|F Chain F, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|G Chain G, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|H Chain H, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|I Chain I, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|J Chain J, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|K Chain K, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|L Chain L, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|M Chain M, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WE3|N Chain N, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|AA Chain a, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|BB Chain b, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|CC Chain c, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|DD Chain d, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|EE Chain e, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|FF Chain f, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|GG Chain g, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|HH Chain h, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|II Chain i, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|JJ Chain j, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|KK Chain k, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|LL Chain l, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|MM Chain m, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
pdb|1WF4|NN Chain n, Crystal Structure Of The Chaperonin Complex
Cpn60CPN10(ADP)7 FROM THERMUS THERMOPHILUS
Length = 543
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 61 EIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD--- 117
E AR + G A+ + VK TLGP+G + V + + G IT DG T+ K V ++
Sbjct: 9 EAARRALERGVNAVANAVKVTLGPRGRN---VVLEKKFGSPTITKDGVTVAKEVELEDHL 65
Query: 118 -NPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDI 176
N A++L +++ +D GDGTT+ TVLA +++ K + +P + G +A +
Sbjct: 66 ENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEA 125
Query: 177 ARKALREASI 186
A + ++ +I
Sbjct: 126 AVEKIKALAI 135
>pdb|1IOK|A Chain A, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|B Chain B, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|C Chain C, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|D Chain D, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|E Chain E, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|F Chain F, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
pdb|1IOK|G Chain G, Crystal Structure Of Chaperonin-60 From Paracoccus
Denitrificans
Length = 545
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 24/222 (10%)
Query: 63 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGV----DN 118
AR G + D VK TLGPKG + V + ++ G IT DG ++ K + + +N
Sbjct: 12 ARDRMLKGVNILADAVKVTLGPKGRN---VVIDKSFGAPRITKDGVSVAKEIELSDKFEN 68
Query: 119 PAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIAR 178
A+++ +++ +DE GDGTT+ TVLA +++ K + ++P + G AT
Sbjct: 69 MGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVV 128
Query: 179 KALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRLKGSGNLSA 238
+A++ A+ +SE +A+ I + + + + +A+ R+ GN
Sbjct: 129 EAIKSAARPVNDSSE--------VAQV---GTISANGESFIGQQIAEAMQRV---GNEGV 174
Query: 239 IQIIKKKGGCLEDSFLDEGFLLDKKIGQHQPKRIENAKLLIA 280
I + + KG E + EG D+ G P + NA +IA
Sbjct: 175 ITVEENKGMETEVEVV-EGMQFDR--GYLSPYFVTNADKMIA 213
>pdb|2EU1|A Chain A, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|B Chain B, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|C Chain C, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|D Chain D, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|E Chain E, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|F Chain F, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|G Chain G, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|H Chain H, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|I Chain I, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|J Chain J, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|K Chain K, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|L Chain L, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|M Chain M, Crystal Structure Of The Chaperonin Groel-E461k
pdb|2EU1|N Chain N, Crystal Structure Of The Chaperonin Groel-E461k
Length = 548
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 63 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----N 118
AR+ G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N
Sbjct: 12 ARVKMLRGVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFEN 68
Query: 119 PAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIAR 178
A+++ +++ +D GDGTT+ TVLA ++ K + ++P + G +A A
Sbjct: 69 MGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAV 128
Query: 179 KALREASI 186
+ L+ S+
Sbjct: 129 EELKALSV 136
>pdb|4AAQ|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAQ|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAR|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAS|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AAU|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB2|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|A Chain A, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|B Chain B, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|C Chain C, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|D Chain D, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|E Chain E, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|F Chain F, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|G Chain G, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|H Chain H, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|I Chain I, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|J Chain J, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|K Chain K, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|L Chain L, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|M Chain M, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
pdb|4AB3|N Chain N, Atp-Triggered Molecular Mechanics Of The Chaperonin Groel
Length = 548
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 63 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----N 118
AR+ G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N
Sbjct: 12 ARVKMLRGVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFEN 68
Query: 119 PAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIAR 178
A+++ +++ +D GDGTT+ TVLA ++ K + ++P + G +A A
Sbjct: 69 MGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAV 128
Query: 179 KALREASI 186
+ L+ S+
Sbjct: 129 EELKALSV 136
>pdb|3C9V|A Chain A, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|B Chain B, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|C Chain C, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|D Chain D, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|E Chain E, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|F Chain F, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|G Chain G, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|H Chain H, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|I Chain I, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|J Chain J, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|K Chain K, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|L Chain L, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|M Chain M, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
pdb|3C9V|N Chain N, C7 Symmetrized Structure Of Unliganded Groel At 4.7
Angstrom Resolution From Cryoem
Length = 526
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 63 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----N 118
AR+ G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N
Sbjct: 11 ARVKMLRGVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFEN 67
Query: 119 PAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIAR 178
A+++ +++ +D GDGTT+ TVLA ++ K + ++P + G +A A
Sbjct: 68 MGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAV 127
Query: 179 KALREASI 186
+ L+ S+
Sbjct: 128 EELKALSV 135
>pdb|1PCQ|A Chain A, Crystal Structure Of Groel-Groes
pdb|1PCQ|B Chain B, Crystal Structure Of Groel-Groes
pdb|1PCQ|C Chain C, Crystal Structure Of Groel-Groes
pdb|1PCQ|D Chain D, Crystal Structure Of Groel-Groes
pdb|1PCQ|E Chain E, Crystal Structure Of Groel-Groes
pdb|1PCQ|F Chain F, Crystal Structure Of Groel-Groes
pdb|1PCQ|G Chain G, Crystal Structure Of Groel-Groes
pdb|1PCQ|H Chain H, Crystal Structure Of Groel-Groes
pdb|1PCQ|I Chain I, Crystal Structure Of Groel-Groes
pdb|1PCQ|J Chain J, Crystal Structure Of Groel-Groes
pdb|1PCQ|K Chain K, Crystal Structure Of Groel-Groes
pdb|1PCQ|L Chain L, Crystal Structure Of Groel-Groes
pdb|1PCQ|M Chain M, Crystal Structure Of Groel-Groes
pdb|1PCQ|N Chain N, Crystal Structure Of Groel-Groes
pdb|1PF9|A Chain A, Groel-Groes-Adp
pdb|1PF9|B Chain B, Groel-Groes-Adp
pdb|1PF9|C Chain C, Groel-Groes-Adp
pdb|1PF9|D Chain D, Groel-Groes-Adp
pdb|1PF9|E Chain E, Groel-Groes-Adp
pdb|1PF9|F Chain F, Groel-Groes-Adp
pdb|1PF9|G Chain G, Groel-Groes-Adp
pdb|1PF9|H Chain H, Groel-Groes-Adp
pdb|1PF9|I Chain I, Groel-Groes-Adp
pdb|1PF9|J Chain J, Groel-Groes-Adp
pdb|1PF9|K Chain K, Groel-Groes-Adp
pdb|1PF9|L Chain L, Groel-Groes-Adp
pdb|1PF9|M Chain M, Groel-Groes-Adp
pdb|1PF9|N Chain N, Groel-Groes-Adp
pdb|1SVT|A Chain A, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|B Chain B, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|C Chain C, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|D Chain D, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|E Chain E, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|F Chain F, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|G Chain G, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|H Chain H, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|I Chain I, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|J Chain J, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|K Chain K, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|L Chain L, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|M Chain M, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SVT|N Chain N, Crystal Structure Of Groel14-Groes7-(Adp-Alfx)7
pdb|1SX4|A Chain A, Groel-Groes-Adp7
pdb|1SX4|B Chain B, Groel-Groes-Adp7
pdb|1SX4|C Chain C, Groel-Groes-Adp7
pdb|1SX4|D Chain D, Groel-Groes-Adp7
pdb|1SX4|E Chain E, Groel-Groes-Adp7
pdb|1SX4|F Chain F, Groel-Groes-Adp7
pdb|1SX4|G Chain G, Groel-Groes-Adp7
pdb|1SX4|H Chain H, Groel-Groes-Adp7
pdb|1SX4|I Chain I, Groel-Groes-Adp7
pdb|1SX4|J Chain J, Groel-Groes-Adp7
pdb|1SX4|K Chain K, Groel-Groes-Adp7
pdb|1SX4|L Chain L, Groel-Groes-Adp7
pdb|1SX4|M Chain M, Groel-Groes-Adp7
pdb|1SX4|N Chain N, Groel-Groes-Adp7
pdb|2YNJ|A Chain A, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|B Chain B, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|C Chain C, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|D Chain D, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|E Chain E, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|F Chain F, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|G Chain G, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|H Chain H, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|I Chain I, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|J Chain J, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|K Chain K, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|L Chain L, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|M Chain M, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
pdb|2YNJ|N Chain N, Groel At Sub-Nanometer Resolution By Constrained Single
Particle Tomography
Length = 524
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 63 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----N 118
AR+ G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N
Sbjct: 11 ARVKMLRGVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFEN 67
Query: 119 PAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIAR 178
A+++ +++ +D GDGTT+ TVLA ++ K + ++P + G +A A
Sbjct: 68 MGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAV 127
Query: 179 KALREASI 186
+ L+ S+
Sbjct: 128 EELKALSV 135
>pdb|2YEY|A Chain A, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|B Chain B, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|C Chain C, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|D Chain D, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|E Chain E, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|F Chain F, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|G Chain G, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|H Chain H, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|I Chain I, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|J Chain J, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|K Chain K, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|L Chain L, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|M Chain M, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
pdb|2YEY|N Chain N, Crystal Structure Of The Allosteric-Defective Chaperonin
Groel E434k Mutant
Length = 524
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 63 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----N 118
AR+ G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N
Sbjct: 11 ARVKMLRGVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFEN 67
Query: 119 PAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIAR 178
A+++ +++ +D GDGTT+ TVLA ++ K + ++P + G +A A
Sbjct: 68 MGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAV 127
Query: 179 KALREASI 186
+ L+ S+
Sbjct: 128 EELKALSV 135
>pdb|1AON|A Chain A, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|B Chain B, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|C Chain C, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|D Chain D, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|E Chain E, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|F Chain F, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|G Chain G, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|H Chain H, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|I Chain I, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|J Chain J, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|K Chain K, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|L Chain L, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|M Chain M, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1AON|N Chain N, Crystal Structure Of The Asymmetric Chaperonin Complex
GroelGROES(ADP)7
pdb|1GRU|A Chain A, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|B Chain B, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|C Chain C, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|D Chain D, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|E Chain E, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|F Chain F, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|G Chain G, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|H Chain H, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|I Chain I, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|J Chain J, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|K Chain K, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|L Chain L, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|M Chain M, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1GRU|N Chain N, Solution Structure Of Groes-Adp7-Groel-Atp7 Complex By
Cryo-Em
pdb|1MNF|A Chain A, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|B Chain B, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|C Chain C, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|D Chain D, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|E Chain E, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|F Chain F, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|G Chain G, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|H Chain H, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|I Chain I, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|J Chain J, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|K Chain K, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|L Chain L, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|M Chain M, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1MNF|N Chain N, Domain Motions In Groel Upon Binding Of An Oligopeptide
pdb|1XCK|A Chain A, Crystal Structure Of Apo Groel
pdb|1XCK|B Chain B, Crystal Structure Of Apo Groel
pdb|1XCK|C Chain C, Crystal Structure Of Apo Groel
pdb|1XCK|D Chain D, Crystal Structure Of Apo Groel
pdb|1XCK|E Chain E, Crystal Structure Of Apo Groel
pdb|1XCK|F Chain F, Crystal Structure Of Apo Groel
pdb|1XCK|G Chain G, Crystal Structure Of Apo Groel
pdb|1XCK|H Chain H, Crystal Structure Of Apo Groel
pdb|1XCK|I Chain I, Crystal Structure Of Apo Groel
pdb|1XCK|J Chain J, Crystal Structure Of Apo Groel
pdb|1XCK|K Chain K, Crystal Structure Of Apo Groel
pdb|1XCK|L Chain L, Crystal Structure Of Apo Groel
pdb|1XCK|M Chain M, Crystal Structure Of Apo Groel
pdb|1XCK|N Chain N, Crystal Structure Of Apo Groel
pdb|2C7C|A Chain A, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|B Chain B, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|C Chain C, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|D Chain D, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|E Chain E, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|F Chain F, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|G Chain G, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|H Chain H, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|I Chain I, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|J Chain J, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|K Chain K, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|L Chain L, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|M Chain M, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7C|N Chain N, Fitted Coordinates For Groel-Atp7-Groes Cryo-Em Complex
(Emd-1180)
pdb|2C7D|A Chain A, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|B Chain B, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|C Chain C, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|D Chain D, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|E Chain E, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|F Chain F, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|G Chain G, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|H Chain H, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|I Chain I, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|J Chain J, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|K Chain K, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|L Chain L, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|M Chain M, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2C7D|N Chain N, Fitted Coordinates For Groel-Adp7-Groes Cryo-Em Complex
(Emd-1181)
pdb|2CGT|A Chain A, Groel-Adp-Gp31 Complex
pdb|2CGT|B Chain B, Groel-Adp-Gp31 Complex
pdb|2CGT|C Chain C, Groel-Adp-Gp31 Complex
pdb|2CGT|D Chain D, Groel-Adp-Gp31 Complex
pdb|2CGT|E Chain E, Groel-Adp-Gp31 Complex
pdb|2CGT|F Chain F, Groel-Adp-Gp31 Complex
pdb|2CGT|G Chain G, Groel-Adp-Gp31 Complex
pdb|2CGT|H Chain H, Groel-Adp-Gp31 Complex
pdb|2CGT|I Chain I, Groel-Adp-Gp31 Complex
pdb|2CGT|J Chain J, Groel-Adp-Gp31 Complex
pdb|2CGT|K Chain K, Groel-Adp-Gp31 Complex
pdb|2CGT|L Chain L, Groel-Adp-Gp31 Complex
pdb|2CGT|M Chain M, Groel-Adp-Gp31 Complex
pdb|2CGT|N Chain N, Groel-Adp-Gp31 Complex
pdb|2NWC|A Chain A, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|B Chain B, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|C Chain C, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|D Chain D, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|E Chain E, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|F Chain F, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|G Chain G, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|H Chain H, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|I Chain I, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|J Chain J, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|K Chain K, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|L Chain L, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|M Chain M, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|2NWC|N Chain N, A 3.02 Angstrom Crystal Structure Of Wild-Type Apo Groel
In A Monoclinic Space Group
pdb|3E76|A Chain A, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|B Chain B, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|C Chain C, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|D Chain D, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|E Chain E, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|F Chain F, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|G Chain G, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|H Chain H, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|I Chain I, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|J Chain J, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|K Chain K, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|L Chain L, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|M Chain M, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
pdb|3E76|N Chain N, Crystal Structure Of Wild-Type Groel With Bound Thallium
Ions
Length = 547
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 63 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----N 118
AR+ G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N
Sbjct: 11 ARVKMLRGVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFEN 67
Query: 119 PAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIAR 178
A+++ +++ +D GDGTT+ TVLA ++ K + ++P + G +A A
Sbjct: 68 MGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAV 127
Query: 179 KALREASI 186
+ L+ S+
Sbjct: 128 EELKALSV 135
>pdb|1J4Z|A Chain A, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|B Chain B, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|C Chain C, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|D Chain D, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|E Chain E, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|F Chain F, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|G Chain G, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|H Chain H, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|I Chain I, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|J Chain J, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|K Chain K, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|L Chain L, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|M Chain M, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1J4Z|N Chain N, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|O Chain O, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|P Chain P, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Q Chain Q, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|R Chain R, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|S Chain S, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|T Chain T, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|U Chain U, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|V Chain V, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|W Chain W, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|X Chain X, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Y Chain Y, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|Z Chain Z, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|1 Chain 1, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
pdb|1KPO|2 Chain 2, Structural And Mechanistic Basis For Allostery In The
Bacterial Chaperonin Groel; See Remark 400
Length = 547
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 63 ARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----N 118
AR+ G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N
Sbjct: 11 ARVKMLRGVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFEN 67
Query: 119 PAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIAR 178
A+++ +++ +D GDGTT+ TVLA ++ K + ++P + G +A A
Sbjct: 68 MGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAV 127
Query: 179 KALREASI 186
+ L+ S+
Sbjct: 128 EELKALSV 135
>pdb|1KP8|A Chain A, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|B Chain B, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|C Chain C, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|D Chain D, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|E Chain E, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|F Chain F, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|G Chain G, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|H Chain H, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|I Chain I, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|J Chain J, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|K Chain K, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|L Chain L, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|M Chain M, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
pdb|1KP8|N Chain N, Structural Basis For Groel-Assisted Protein Folding From
The Crystal Structure Of (Groel-Kmgatp)14 At 2.0 A
Resolution
Length = 547
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 70 GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----NPAAKILV 125
G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREAS 185
+++ +D GDGTT+ TVLA ++ K + ++P + G +A +A + L+ S
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALS 134
Query: 186 I 186
+
Sbjct: 135 V 135
>pdb|1GR5|A Chain A, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|B Chain B, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|C Chain C, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|D Chain D, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|E Chain E, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|F Chain F, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|G Chain G, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|H Chain H, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|I Chain I, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|J Chain J, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|K Chain K, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|L Chain L, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|M Chain M, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|1GR5|N Chain N, Solution Structure Of Apo Groel By Cryo-Electron
Microscopy
pdb|2C7E|A Chain A, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|B Chain B, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|C Chain C, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|D Chain D, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|E Chain E, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|F Chain F, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|G Chain G, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|H Chain H, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|I Chain I, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|J Chain J, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|K Chain K, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|L Chain L, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|M Chain M, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
pdb|2C7E|N Chain N, Revised Atomic Structure Fitting Into A Groel(D398a)-Atp7
Cryo-Em Map (Emd 1047)
Length = 547
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 70 GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----NPAAKILV 125
G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREAS 185
+++ +D GDGTT+ TVLA ++ K + ++P + G +A +A + L+ S
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALS 134
Query: 186 I 186
+
Sbjct: 135 V 135
>pdb|1SX3|A Chain A, Groel14-(Atpgammas)14
pdb|1SX3|B Chain B, Groel14-(Atpgammas)14
pdb|1SX3|C Chain C, Groel14-(Atpgammas)14
pdb|1SX3|D Chain D, Groel14-(Atpgammas)14
pdb|1SX3|E Chain E, Groel14-(Atpgammas)14
pdb|1SX3|F Chain F, Groel14-(Atpgammas)14
pdb|1SX3|G Chain G, Groel14-(Atpgammas)14
pdb|1SX3|H Chain H, Groel14-(Atpgammas)14
pdb|1SX3|I Chain I, Groel14-(Atpgammas)14
pdb|1SX3|J Chain J, Groel14-(Atpgammas)14
pdb|1SX3|K Chain K, Groel14-(Atpgammas)14
pdb|1SX3|L Chain L, Groel14-(Atpgammas)14
pdb|1SX3|M Chain M, Groel14-(Atpgammas)14
pdb|1SX3|N Chain N, Groel14-(Atpgammas)14
Length = 525
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 70 GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----NPAAKILV 125
G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREAS 185
+++ +D GDGTT+ TVLA ++ K + ++P + G +A +A + L+ S
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALS 134
Query: 186 I 186
+
Sbjct: 135 V 135
>pdb|1SS8|A Chain A, Groel
pdb|1SS8|B Chain B, Groel
pdb|1SS8|C Chain C, Groel
pdb|1SS8|D Chain D, Groel
pdb|1SS8|E Chain E, Groel
pdb|1SS8|F Chain F, Groel
pdb|1SS8|G Chain G, Groel
Length = 524
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 70 GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----NPAAKILV 125
G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREAS 185
+++ +D GDGTT+ TVLA ++ K + ++P + G +A +A + L+ S
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALS 134
Query: 186 I 186
+
Sbjct: 135 V 135
>pdb|1OEL|A Chain A, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|B Chain B, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|C Chain C, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|D Chain D, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|E Chain E, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|F Chain F, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
pdb|1OEL|G Chain G, Conformational Variability In The Refined Structure Of The
Chaperonin Groel At 2.8 Angstrom Resolution
Length = 547
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 70 GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----NPAAKILV 125
G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREAS 185
+++ +D GDGTT+ TVLA ++ K + ++P + G +A +A + L+ S
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALS 134
Query: 186 I 186
+
Sbjct: 135 V 135
>pdb|1GRL|A Chain A, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|B Chain B, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|C Chain C, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|D Chain D, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|E Chain E, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|F Chain F, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
pdb|1GRL|G Chain G, The Crystal Structure Of The Bacterial Chaperonin Groel At
2.8 Angstroms
Length = 548
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 70 GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----NPAAKILV 125
G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N A+++
Sbjct: 19 GVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFENMGAQMVK 75
Query: 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREAS 185
+++ +D GDGTT+ TVLA ++ K + ++P + G +A +A + L+ S
Sbjct: 76 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALS 135
Query: 186 I 186
+
Sbjct: 136 V 136
>pdb|3CAU|A Chain A, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|B Chain B, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|C Chain C, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|D Chain D, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|E Chain E, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|F Chain F, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|G Chain G, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|H Chain H, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|I Chain I, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|J Chain J, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|K Chain K, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|L Chain L, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|M Chain M, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
pdb|3CAU|N Chain N, D7 Symmetrized Structure Of Unliganded Groel At 4.2
Angstrom Resolution By Cryoem
Length = 526
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 70 GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVD----NPAAKILV 125
G + D VK TLGPKG + +L ++ G IT DG ++ + + ++ N A+++
Sbjct: 18 GVNVLADAVKVTLGPKGRNVVL---DKSFGAPTITKDGVSVAREIELEDKFENMGAQMVK 74
Query: 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREAS 185
+++ +D GDGTT+ TVLA ++ K + ++P + G +A +A + L+ S
Sbjct: 75 EVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALS 134
Query: 186 I 186
+
Sbjct: 135 V 135
>pdb|1E0R|B Chain B, Beta-Apical Domain Of Thermosome
Length = 159
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 257 GFLLDK-KIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXX 315
G ++DK K+ P +++AK+ + + P++ K + F + +R++
Sbjct: 3 GIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPE-FDTNLRIEDPSMIQKFLAQEENML 61
Query: 316 XDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTF 375
+ V+KI ANV I ++ I + + + AG+ A+ +++LA TG IVST
Sbjct: 62 REMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTI 121
Query: 376 DNPDQVKLGKCDLIEEV 392
D LG + +E+V
Sbjct: 122 DEISSSDLGTAERVEQV 138
>pdb|1ASS|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma
Acidophilum
pdb|1ASX|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma
Acidophilum
Length = 159
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 257 GFLLDK-KIGQHQPKRIENAKLLIANTPMDTDKIKVFGSRVRVDSXXXXXXXXXXXXXXX 315
G ++DK K+ P ++NAK+ + ++ ++ K ++ ++V++
Sbjct: 3 GIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEI-EAKVQISDPSKIQDFLNQETNTF 61
Query: 316 XDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTF 375
VEKI K ANV + ++ I + + A G+ A+ +E+LA TG +IV+
Sbjct: 62 KQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDL 121
Query: 376 DNPDQVKLGKCDLIEE 391
D+ LG+ + +EE
Sbjct: 122 DDLTPSVLGEAETVEE 137
>pdb|1SJP|A Chain A, Mycobacterium Tuberculosis Chaperonin60.2
pdb|1SJP|B Chain B, Mycobacterium Tuberculosis Chaperonin60.2
Length = 504
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 99 GQVEITNDGATILKSVGVDNP----AAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAE 154
G ITNDG +I K + +++P A+++ +++K DD GDGTT+ TVLA L++
Sbjct: 2 GAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGL 61
Query: 155 KLIDQRLHPQTIIAGWRRATD 175
+ + +P + G +A +
Sbjct: 62 RNVAAGANPLGLKRGIEKAVE 82
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 328 NVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCD 387
++ N +L NY + + +A +AI A G + + +GG I+ NP+Q+ L K D
Sbjct: 240 SLLANSKLDGNYIDDKYINAYYVAIATA---GHDTTSSSSGGAIIGLSRNPEQLALAKSD 296
Query: 388 ------LIEEVCLWTKNV 399
L++E WT V
Sbjct: 297 PALIPRLVDEAVRWTAPV 314
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 54 EAEEEKSEIARMSSFIGAIAIGDLVKSTLGPK-GMDKILVSMGRNSGQVEITNDGATILK 112
+AE + + A +F+ + GDL+K L PK + V+ GRN QV TN A + K
Sbjct: 374 QAEADGTAEAEKVAFLLGVNAGDLLKCLLKPKIKVGTEYVTQGRNKDQV--TNSIAALAK 431
Query: 113 SV 114
S+
Sbjct: 432 SL 433
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 49 RILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPK-GMDKILVSMGRNSGQV 101
R + +AE + + A +F+ I GDL+K+ L PK + +V+ G+N QV
Sbjct: 361 RPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQV 414
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 49 RILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPK-GMDKILVSMGRNSGQV 101
R + +AE + + A +F+ I GDL+K+ L PK + +V+ G+N QV
Sbjct: 366 RPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQV 419
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 49 RILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPK-GMDKILVSMGRNSGQV 101
R + +AE + + A +F+ I GDL+K+ L PK + +V+ G+N QV
Sbjct: 366 RPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQV 419
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 49 RILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPK-GMDKILVSMGRNSGQV 101
R + +AE + + A +F+ I GDL+K+ L PK + +V+ G+N QV
Sbjct: 362 RPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQV 415
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 49 RILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPK-GMDKILVSMGRNSGQV 101
R + +AE + + A +F+ I GDL+K+ L PK + +V+ G+N QV
Sbjct: 366 RPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQV 419
>pdb|1KON|A Chain A, Crystal Structure Of E.Coli Yebc
Length = 249
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 343 LFADAGVMAIEHADFDGIERLALVTGGEIVSTFDN 377
LF+ GV++ E D D I AL G E V T+D+
Sbjct: 136 LFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDD 170
>pdb|2EGT|A Chain A, Crystal Structure Of Hypothetical Protein (aq1549) From
Aquifex Aeolicus
pdb|2E8C|A Chain A, Crystal Structure Of A Hypothetical Protein (aq_1549)
From Aquifex Aeolicus Vf5
pdb|2E8E|A Chain A, Crystal Structure Of A Hypothetical Protein (Aq_1549)
From Aquifex Aeolicus Vf5 (Reduced Form)
pdb|2E8F|A Chain A, Crystal Structure Of A Hypothetical Protein (Aq_1549)
From Aquifex Aeolicus Vf5 (Oxidised Form)
Length = 132
Score = 28.5 bits (62), Expect = 7.9, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 54 EAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSG 99
E +E + E++ ++F+ +IG++ G M+ +LVS+G SG
Sbjct: 2 EVKEVELELSSEATFLSKTSIGEITAGEKGLNPMELLLVSIGSCSG 47
>pdb|3PP7|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
In Complex With The Drug Suramin, An Inhibitor Of
Glycolysis.
pdb|3PP7|B Chain B, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
In Complex With The Drug Suramin, An Inhibitor Of
Glycolysis
Length = 498
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 65 MSSFI-GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITN------DGATILKS-VGV 116
+SFI A +GD V+ LGPKG D +++ N V+ + DG + + +GV
Sbjct: 209 FASFIRSAEQVGD-VRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGV 267
Query: 117 DNPAAKILV 125
+ PA K++V
Sbjct: 268 EIPAEKVVV 276
>pdb|1PKL|A Chain A, The Structure Of Leishmania Pyruvate Kinase
pdb|1PKL|B Chain B, The Structure Of Leishmania Pyruvate Kinase
pdb|1PKL|C Chain C, The Structure Of Leishmania Pyruvate Kinase
pdb|1PKL|D Chain D, The Structure Of Leishmania Pyruvate Kinase
pdb|1PKL|E Chain E, The Structure Of Leishmania Pyruvate Kinase
pdb|1PKL|F Chain F, The Structure Of Leishmania Pyruvate Kinase
pdb|1PKL|H Chain H, The Structure Of Leishmania Pyruvate Kinase
pdb|1PKL|G Chain G, The Structure Of Leishmania Pyruvate Kinase
pdb|3KTX|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk)in Complex With 1,3,6,8-Pyrenetetrasulfonic Acid
pdb|3KTX|B Chain B, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk)in Complex With 1,3,6,8-Pyrenetetrasulfonic Acid
pdb|3HQN|D Chain D, Apo Crystal Structure Of Leishmania
Mexicana(Lmpyk)pyruvate Kinase
pdb|3HQN|A Chain A, Apo Crystal Structure Of Leishmania
Mexicana(Lmpyk)pyruvate Kinase
pdb|3HQO|K Chain K, Crystal Structures Of Leishmania Mexicana Pyruvate Kinase
(L Complex With Atp And Oxalate
pdb|3HQO|A Chain A, Crystal Structures Of Leishmania Mexicana Pyruvate Kinase
(L Complex With Atp And Oxalate
pdb|3HQO|B Chain B, Crystal Structures Of Leishmania Mexicana Pyruvate Kinase
(L Complex With Atp And Oxalate
pdb|3HQO|C Chain C, Crystal Structures Of Leishmania Mexicana Pyruvate Kinase
(L Complex With Atp And Oxalate
pdb|3HQP|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|B Chain B, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|C Chain C, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|D Chain D, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|E Chain E, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|F Chain F, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|G Chain G, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|H Chain H, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|I Chain I, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|J Chain J, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|K Chain K, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|L Chain L, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|M Chain M, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|N Chain N, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|O Chain O, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQP|P Chain P, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk) In Complex With Atp, Oxalate And Fructose 2,6
Bisphosphate
pdb|3HQQ|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|B Chain B, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|C Chain C, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|D Chain D, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|E Chain E, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|F Chain F, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|G Chain G, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|H Chain H, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|I Chain I, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|J Chain J, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|K Chain K, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|L Chain L, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|M Chain M, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|N Chain N, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|O Chain O, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|P Chain P, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|Q Chain Q, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|R Chain R, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|S Chain S, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|T Chain T, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|U Chain U, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|V Chain V, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|W Chain W, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3HQQ|X Chain X, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lm Complex With Fructose 2,6 Bisphosphate
pdb|3IS4|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk)in Complex With 1,3,6,8-Pyrenetetrasulfonic Acid
pdb|3IS4|B Chain B, Crystal Structure Of Leishmania Mexicana Pyruvate Kinase
(Lmpyk)in Complex With 1,3,6,8-Pyrenetetrasulfonic Acid
pdb|3QV6|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate
Kinase(Lmpyk)in Complex With Acid Blue 80.
pdb|3QV6|D Chain D, Crystal Structure Of Leishmania Mexicana Pyruvate
Kinase(Lmpyk)in Complex With Acid Blue 80.
pdb|3QV7|D Chain D, Crystal Structure Of Leishmania Mexicana Pyruvate
Kinase(Lmpyk)in Complex With Ponceau S And Acid Blue 25.
pdb|3QV7|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate
Kinase(Lmpyk)in Complex With Ponceau S And Acid Blue 25.
pdb|3QV7|B Chain B, Crystal Structure Of Leishmania Mexicana Pyruvate
Kinase(Lmpyk)in Complex With Ponceau S And Acid Blue 25.
pdb|3QV7|C Chain C, Crystal Structure Of Leishmania Mexicana Pyruvate
Kinase(Lmpyk)in Complex With Ponceau S And Acid Blue 25.
pdb|3QV8|D Chain D, Crystal Structure Of Leishmania Mexicana Pyruvate
Kinase(Lmpyk)in Complex With
Benzothiazole-2,5-Disulfonic Acid.
pdb|3QV8|A Chain A, Crystal Structure Of Leishmania Mexicana Pyruvate
Kinase(Lmpyk)in Complex With
Benzothiazole-2,5-Disulfonic Acid.
pdb|3SRK|A Chain A, A New Class Of Suicide Inhibitor Blocks Nucleotide Binding
To Pyruvate Kinase
pdb|3SRK|B Chain B, A New Class Of Suicide Inhibitor Blocks Nucleotide Binding
To Pyruvate Kinase
Length = 499
Score = 28.1 bits (61), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 65 MSSFI-GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITN------DGATILKS-VGV 116
+SFI A +GD V+ LGPKG D +++ N V+ + DG + + +GV
Sbjct: 210 FASFIRSAEQVGD-VRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGV 268
Query: 117 DNPAAKILV 125
+ PA K++V
Sbjct: 269 EIPAEKVVV 277
>pdb|3E0V|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|B Chain B, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|C Chain C, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|D Chain D, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|E Chain E, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0V|F Chain F, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana In Complex With Sulphate Ions
pdb|3E0W|A Chain A, Crystal Structure Of Pyruvate Kinase From Leishmania
Mexicana
Length = 539
Score = 28.1 bits (61), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 65 MSSFI-GAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITN------DGATILKS-VGV 116
+SFI A +GD V+ LGPKG D +++ N V+ + DG + + +GV
Sbjct: 250 FASFIRSAEQVGD-VRKALGPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGV 308
Query: 117 DNPAAKILV 125
+ PA K++V
Sbjct: 309 EIPAEKVVV 317
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,302,281
Number of Sequences: 62578
Number of extensions: 446020
Number of successful extensions: 1443
Number of sequences better than 100.0: 68
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1267
Number of HSP's gapped (non-prelim): 77
length of query: 418
length of database: 14,973,337
effective HSP length: 101
effective length of query: 317
effective length of database: 8,652,959
effective search space: 2742988003
effective search space used: 2742988003
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)