Query psy17549
Match_columns 418
No_of_seqs 184 out of 1698
Neff 7.5
Searched_HMMs 29240
Date Sat Aug 17 01:21:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17549.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17549hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ko1_A Chaperonin; 9-fold symm 100.0 1.6E-79 5.4E-84 644.3 36.0 363 44-413 12-387 (553)
2 3iyg_B T-complex protein 1 sub 100.0 9.1E-79 3.1E-83 634.7 39.3 356 54-413 2-366 (513)
3 3iyg_H T-complex protein 1 sub 100.0 1.1E-78 3.9E-83 633.8 38.5 358 52-413 1-369 (515)
4 1a6d_B Thermosome (beta subuni 100.0 9E-79 3.1E-83 638.7 37.9 361 46-413 5-378 (543)
5 3ruv_A Chaperonin, CPN; double 100.0 8.9E-79 3E-83 638.3 37.2 360 46-413 4-373 (543)
6 1q3q_A Thermosome alpha subuni 100.0 1.5E-78 5.2E-83 637.1 38.9 361 46-413 7-380 (548)
7 1a6d_A Thermosome (alpha subun 100.0 4.2E-78 1.4E-82 633.4 39.1 358 47-413 7-377 (545)
8 3iyg_G T-complex protein 1 sub 100.0 1.5E-77 5.2E-82 625.7 38.3 352 55-413 2-368 (515)
9 3iyg_A T-complex protein 1 sub 100.0 2.7E-77 9.3E-82 625.6 38.9 352 55-413 3-375 (529)
10 3p9d_G T-complex protein 1 sub 100.0 4.7E-79 1.6E-83 640.8 23.6 364 46-413 8-382 (550)
11 3p9d_H T-complex protein 1 sub 100.0 3.2E-77 1.1E-81 629.0 30.9 359 48-413 11-390 (568)
12 3p9d_A T-complex protein 1 sub 100.0 1.1E-76 3.9E-81 623.8 33.4 357 50-413 12-391 (559)
13 3iyg_D T-complex protein 1 sub 100.0 6.9E-76 2.4E-80 613.6 38.2 351 56-413 5-373 (518)
14 3p9d_E T-complex protein 1 sub 100.0 1.1E-76 3.9E-81 624.2 32.1 379 31-413 12-412 (562)
15 3p9d_C T-complex protein 1 sub 100.0 4.9E-77 1.7E-81 627.6 28.8 352 46-404 3-370 (590)
16 3iyg_E T-complex protein 1 sub 100.0 1.3E-75 4.5E-80 611.5 38.9 354 55-413 3-369 (515)
17 3iyg_Z T-complex protein 1 sub 100.0 9.6E-76 3.3E-80 612.0 36.9 350 55-413 3-372 (517)
18 3p9d_B T-complex protein 1 sub 100.0 3.8E-77 1.3E-81 624.6 23.7 364 47-413 2-373 (527)
19 3iyg_Q T-complex protein 1 sub 100.0 3.9E-75 1.3E-79 607.5 36.8 352 53-413 1-365 (512)
20 3p9d_D T-complex protein 1 sub 100.0 8E-76 2.8E-80 614.0 30.8 356 51-413 8-383 (528)
21 3p9d_F T-complex protein 1 sub 100.0 2.5E-76 8.5E-81 620.5 24.1 362 47-413 2-384 (546)
22 3aq1_B Thermosome subunit; gro 100.0 3E-67 1E-71 546.3 25.8 317 90-413 1-331 (500)
23 1kp8_A Groel protein; chaperon 100.0 1E-59 3.5E-64 492.3 31.4 301 57-404 5-334 (547)
24 1we3_A CPN60(groel); chaperoni 100.0 3E-59 1E-63 489.2 30.6 299 58-404 6-333 (543)
25 1iok_A Chaperonin 60; chaperon 100.0 5.2E-60 1.8E-64 494.8 24.5 301 57-404 6-335 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 6.9E-59 2.4E-63 485.1 26.4 302 57-405 5-334 (546)
27 1gml_A T-complex protein 1 sub 100.0 4E-39 1.4E-43 291.3 18.3 164 249-413 1-172 (178)
28 1ass_A Thermosome; chaperonin, 100.0 4.2E-36 1.4E-40 266.5 14.3 151 255-406 1-152 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 98.7 6E-08 2E-12 86.5 11.5 115 253-392 3-141 (194)
30 1srv_A Protein (groel (HSP60 c 98.7 1.1E-07 3.6E-12 81.1 11.8 111 257-392 1-135 (145)
31 3osx_A 60 kDa chaperonin; alph 98.7 2.2E-07 7.6E-12 83.1 12.8 113 255-392 12-148 (201)
32 1eo1_A Hypothetical protein MT 70.9 9 0.00031 30.9 6.3 52 318-370 57-108 (124)
33 1o13_A Probable NIFB protein; 68.2 7.4 0.00025 32.3 5.3 53 317-370 67-119 (136)
34 1rdu_A Conserved hypothetical 68.0 12 0.00042 29.7 6.5 52 318-370 54-105 (116)
35 2yx6_A Hypothetical protein PH 66.0 9.3 0.00032 30.7 5.4 53 317-370 54-106 (121)
36 2wfb_A Putative uncharacterize 63.4 11 0.00037 30.3 5.3 52 317-369 58-110 (120)
37 2re2_A Uncharacterized protein 52.1 19 0.00064 29.7 5.0 52 317-370 70-121 (136)
38 2qtd_A Uncharacterized protein 37.0 45 0.0016 25.7 4.8 48 320-369 50-97 (105)
39 3v7e_A Ribosome-associated pro 31.3 1.1E+02 0.0036 22.7 5.8 50 317-369 18-71 (82)
40 2ooa_A E3 ubiquitin-protein li 23.9 1.1E+02 0.0037 21.0 4.1 35 151-185 13-50 (52)
41 2xzm_U Ribosomal protein L7AE 23.4 1.6E+02 0.0055 23.8 6.0 50 317-369 31-85 (126)
42 2lbw_A H/ACA ribonucleoprotein 23.2 2.2E+02 0.0075 22.6 6.8 50 316-368 26-80 (121)
43 2nx6_A Nematocyst outer WALL a 22.7 35 0.0012 19.4 1.2 13 15-27 1-13 (27)
44 3psh_A Protein HI_1472; substr 22.2 98 0.0034 28.7 5.2 52 319-370 77-154 (326)
45 2ale_A SNU13, NHP2/L7AE family 21.3 1.7E+02 0.0059 23.9 5.9 52 315-369 37-93 (134)
46 2r79_A Periplasmic binding pro 21.3 1.6E+02 0.0053 26.7 6.3 52 319-370 52-111 (283)
47 2q8p_A Iron-regulated surface 20.4 1.1E+02 0.0037 27.2 4.9 52 319-370 53-110 (260)
No 1
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.6e-79 Score=644.30 Aligned_cols=363 Identities=34% Similarity=0.517 Sum_probs=334.4
Q ss_pred cCcchhhccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHH
Q psy17549 44 SLNPVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKI 123 (418)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akl 123 (418)
..+|..+++++++.++|.+|+.+|+.||+.||++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|||
T Consensus 12 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~Akl 88 (553)
T 3ko1_A 12 EGIPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDS---LGDITITNDGATILDKMDLQHPAAKL 88 (553)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECT---TSCEEEECCHHHHHHSSCCCSHHHHH
T ss_pred CCCeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhh---ccceEEecCccchhhhhhccChhHHH
Confidence 346888999999999999999999999999999999999999999999999 59999999999999999999999999
Q ss_pred HHHhhhhccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHH
Q psy17549 124 LVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIA 203 (418)
Q Consensus 124 l~~~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia 203 (418)
++++|++||+++||||||++|||++||++|.+++.+|+||+.|++||++|++.++++|++++++++.+ +++.|.++|
T Consensus 89 l~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---d~e~L~~vA 165 (553)
T 3ko1_A 89 LVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSIN---DTDLLRKIA 165 (553)
T ss_dssp HHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTT---CHHHHHHHH
T ss_pred HHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCC---cHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998643 268999999
Q ss_pred HhhccccccchhhHHHHHHHHHHHHHhhcc------CCCcceEEEEccCCCcccceeeeeEEEeccCCC-CCcceecCce
Q psy17549 204 RTTLSSKILSQHKEYFSKLAVDAVLRLKGS------GNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAK 276 (418)
Q Consensus 204 ~tsl~sK~~~~~~~~ls~lvv~Av~~v~~~------~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~k 276 (418)
+|+++||+.++++++|++|++||+.+++++ +|+++|+|+++.||++++|++++|++|++++.+ +||++++|||
T Consensus 166 ~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~k 245 (553)
T 3ko1_A 166 MTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAK 245 (553)
T ss_dssp HHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCE
T ss_pred HHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccce
Confidence 999999999999999999999999999753 678899999999999999999999999999974 7999999999
Q ss_pred EEEeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCC
Q psy17549 277 LLIANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHAD 356 (418)
Q Consensus 277 Illl~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~ 356 (418)
|++++++|++++++.+ +++.+++++++.++.++|+++++.++++|.+.|+|||+++++|++.+++||.++||+++++++
T Consensus 246 Ill~d~~Le~~k~e~~-~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~ 324 (553)
T 3ko1_A 246 IALIDASLEVEKPELD-AEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAK 324 (553)
T ss_dssp EEEECSCBSCCCCTTT-CCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCC
T ss_pred EEEecCcccccCcccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhh
Confidence 9999999999999985 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 357 FDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 357 ~~~L~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
+++|+|||++|||+++++++++++++||+|+.|++.++|+++|+||++ ||++|||.+
T Consensus 325 k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~t 387 (553)
T 3ko1_A 325 KSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPKSISILIRGGL 387 (553)
T ss_dssp HHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSSCEEEEECCSS
T ss_pred hhhHHHHHHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCCceEEEeeeccH
Confidence 999999999999999999999999999999999999999999999996 599999965
No 2
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=9.1e-79 Score=634.66 Aligned_cols=356 Identities=72% Similarity=1.043 Sum_probs=341.1
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCC--CCeEEccCHHHHHHhccccChHHHHHHHhhhhc
Q psy17549 54 EAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNS--GQVEITNDGATILKSVGVDNPAAKILVDMSKVQ 131 (418)
Q Consensus 54 ~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~--g~v~iTnDG~tIl~~l~~~hP~akll~~~~~~~ 131 (418)
+++.++|.+++.+|+.||+.+|++++|||||+||+|||+++ . |+++|||||+|||++|+++||+|||++++|++|
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~q 78 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSS---GRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQ 78 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecC---CCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999999998 7 999999999999999999999999999999999
Q ss_pred cccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhccccc
Q psy17549 132 DDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKI 211 (418)
Q Consensus 132 ~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK~ 211 (418)
|+++||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|++++++++.+...+++.|.++|+|+++||+
T Consensus 79 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~ 158 (513)
T 3iyg_B 79 DDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKL 158 (513)
T ss_pred hhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999998874321347899999999999999
Q ss_pred cchhhHHHHHHHHHHHHHhhccCCCcceEEEEccCCCcccceeeeeEEEeccCCCCCcceecCceEEEeeccccccccc-
Q psy17549 212 LSQHKEYFSKLAVDAVLRLKGSGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQHQPKRIENAKLLIANTPMDTDKIK- 290 (418)
Q Consensus 212 ~~~~~~~ls~lvv~Av~~v~~~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~~~~~~i~n~kIlll~~~Le~~k~e- 290 (418)
.++++++|++|++||+.++++++|+++|+|+++.||+++||++++|++|++++.++||++++||||++++++||+++++
T Consensus 159 ~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~m~~~~en~kIll~~~~Le~~k~e~ 238 (513)
T 3iyg_B 159 LTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKI 238 (513)
T ss_pred cccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCCCceeecCceEEEEcCCcccccccc
Confidence 9999999999999999999888889999999999999999999999999999987799999999999999999999998
Q ss_pred ccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHHhCCe
Q psy17549 291 VFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGE 370 (418)
Q Consensus 291 ~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa~ 370 (418)
. ++++.+++++++.++.++|++++++++++|.+.|++||+++++|++.+++||.++||++++++++++|+|||++|||+
T Consensus 239 ~-~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ 317 (513)
T 3iyg_B 239 F-GSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGE 317 (513)
T ss_pred c-CCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCE
Confidence 6 488999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 371 IVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 371 iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
++++++++++++||+|+.|+++.+|+++|++|++ ||++|||.+
T Consensus 318 ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t 366 (513)
T 3iyg_B 318 IASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGAT 366 (513)
T ss_pred EecccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCC
Confidence 9999999999999999999999999999999995 699999964
No 3
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-78 Score=633.78 Aligned_cols=358 Identities=35% Similarity=0.482 Sum_probs=341.3
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHHhhhhc
Q psy17549 52 KHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQ 131 (418)
Q Consensus 52 ~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~~~~~~ 131 (418)
++++++++|.+++.+|+.||+.+|++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|+|++++|++|
T Consensus 1 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~q 77 (515)
T 3iyg_H 1 KEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDG---RGKATISNDGATILKLLDVVHPAAKTLVDIAKSQ 77 (515)
T ss_pred CCCccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECC---CCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHh
Confidence 5788889999999999999999999999999999999999999 5999999999999999999999999999999999
Q ss_pred cccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCc-hhhHHHHHHHHHhhcccc
Q psy17549 132 DDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNS-EKFREDLLNIARTTLSSK 210 (418)
Q Consensus 132 ~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~-~~~~~~L~~ia~tsl~sK 210 (418)
|+++||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|++++++++.++ ...++.|.++|+|+++||
T Consensus 78 d~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK 157 (515)
T 3iyg_H 78 DAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSK 157 (515)
T ss_pred hceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999886322 112578899999999999
Q ss_pred ccchhhHHHHHHHHHHHHHhhccCCCcceEEEEccCCCcccceeeeeEEEeccCCC----CCcceecCceEEEeeccccc
Q psy17549 211 ILSQHKEYFSKLAVDAVLRLKGSGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ----HQPKRIENAKLLIANTPMDT 286 (418)
Q Consensus 211 ~~~~~~~~ls~lvv~Av~~v~~~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~----~~~~~i~n~kIlll~~~Le~ 286 (418)
+.++++++|++|+++|+.++++++|+++|+|+++.||+++||++++|++|++++.+ .||++++||||++++++||+
T Consensus 158 ~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~ 237 (515)
T 3iyg_H 158 LISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELEL 237 (515)
T ss_pred cccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEcccccc
Confidence 99999999999999999999888899999999999999999999999999999974 35899999999999999999
Q ss_pred ccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHH
Q psy17549 287 DKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALV 366 (418)
Q Consensus 287 ~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~ 366 (418)
++++.+ +++.+++++++.++.++|+++++.++++|.+.|++||+++++|+|.+++||+++||++++++++++|+|||++
T Consensus 238 ~k~e~~-~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~ 316 (515)
T 3iyg_H 238 KAEKDN-AEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMA 316 (515)
T ss_pred cccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHH
Confidence 999985 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 367 TGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 367 tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
|||+++++++++++++||+|+.|++.++|+++|++|++ ||++|||.+
T Consensus 317 tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t 369 (515)
T 3iyg_H 317 CGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGA 369 (515)
T ss_pred hCCEEeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCc
Confidence 99999999999999999999999999999999999985 699999964
No 4
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=9e-79 Score=638.65 Aligned_cols=361 Identities=34% Similarity=0.519 Sum_probs=333.6
Q ss_pred cchhhccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHH
Q psy17549 46 NPVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILV 125 (418)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~ 125 (418)
+|..+++++++..+|.+|+..|+.||..+|++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|||++
T Consensus 5 ~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~---~g~~~iTnDG~tIlk~i~v~hP~Akll~ 81 (543)
T 1a6d_B 5 QPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDS---LGDIVITNDGVTILKEMDVEHPAAKMMV 81 (543)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECT---TCCEEEECCHHHHHHHSCCCSHHHHHHH
T ss_pred cchhhcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC---CCCeEEeCCHHHHHHHhhccchHHHHHH
Confidence 5767899999999999999999999999999999999999999999999 5999999999999999999999999999
Q ss_pred HhhhhccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHh
Q psy17549 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIART 205 (418)
Q Consensus 126 ~~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~t 205 (418)
++|++||+++||||||+++||++||++|++++.+|+||+.|++||++|++.++++|++++++++.. +++.|.++++|
T Consensus 82 e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~---~~~~l~~va~t 158 (543)
T 1a6d_B 82 EVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGAD---EKALLLKMAQT 158 (543)
T ss_dssp HHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTT---HHHHHHHHHHH
T ss_pred HHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988643 36889999999
Q ss_pred hccccccchhhHHHHHHHHHHHHHhhcc------CCCcceEEEEccCCCcccceeeeeEEEeccCCC-CCcceecCceEE
Q psy17549 206 TLSSKILSQHKEYFSKLAVDAVLRLKGS------GNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLL 278 (418)
Q Consensus 206 sl~sK~~~~~~~~ls~lvv~Av~~v~~~------~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~kIl 278 (418)
+++||+.++++++|++|+++|+.+++++ +|+++|+|+|++|++++||++++|++|++++.+ +||++++||||+
T Consensus 159 sl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIl 238 (543)
T 1a6d_B 159 SLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIA 238 (543)
T ss_dssp HHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEE
T ss_pred HhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEE
Confidence 9999999999999999999999999643 577899999999999999999999999999975 799999999999
Q ss_pred EeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHH
Q psy17549 279 IANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFD 358 (418)
Q Consensus 279 ll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~ 358 (418)
+++++||+++++.+ +++.+++++++..+.++|+++++.++++|.+.|++||+++++|++.+++||.++||+++++++++
T Consensus 239 l~~~~Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~ 317 (543)
T 1a6d_B 239 LLDAPLEIKKPEFD-TNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKS 317 (543)
T ss_dssp EESSCBSCCCCSSE-EEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHH
T ss_pred EEecccccccccCC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHH
Confidence 99999999999985 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 359 GIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 359 ~L~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
+|+|||++|||+++++++++++++||+|+.|++.++|+++|++|++ ||++|||.+
T Consensus 318 ~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t 378 (543)
T 1a6d_B 318 DMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGET 378 (543)
T ss_dssp HHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESS
T ss_pred HHHHHHHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCC
Confidence 9999999999999999999999999999999999999999999996 599999965
No 5
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=8.9e-79 Score=638.28 Aligned_cols=360 Identities=32% Similarity=0.485 Sum_probs=346.3
Q ss_pred cchhhccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHH
Q psy17549 46 NPVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILV 125 (418)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~ 125 (418)
+| .+++++++.++|.+|+.+|+.||+.||++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|||++
T Consensus 4 ~p-~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~Akll~ 79 (543)
T 3ruv_A 4 QP-GVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDD---LGDVVVTNDGVTILREMSVEHPAAKMLI 79 (543)
T ss_dssp CC-CSSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECT---TSCEEEECCHHHHHHHSCCCCHHHHHHH
T ss_pred CC-eeecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECC---CCCEEEECCHHHHHHHccCcCHHHHHHH
Confidence 57 7899999999999999999999999999999999999999999999 5999999999999999999999999999
Q ss_pred HhhhhccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHh
Q psy17549 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIART 205 (418)
Q Consensus 126 ~~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~t 205 (418)
++|++||+++||||||++|||++||++|.+++.+|+||+.|++||++|++.++++|++++++++.+ +++.|.++|+|
T Consensus 80 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---d~~~L~~va~t 156 (543)
T 3ruv_A 80 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQ---DKEILTKIAMT 156 (543)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTT---CHHHHHHHHHH
T ss_pred HHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCC---CHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998643 26899999999
Q ss_pred hccccccchhhHHHHHHHHHHHHHhhcc---CCCcceEEEEccCCCcccceeeeeEEEeccCCC-CCcceecCceEEEee
Q psy17549 206 TLSSKILSQHKEYFSKLAVDAVLRLKGS---GNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLLIAN 281 (418)
Q Consensus 206 sl~sK~~~~~~~~ls~lvv~Av~~v~~~---~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~kIlll~ 281 (418)
+++||+.++++++|++|++||+.+++++ +|+++|+|+++.|+++++|++++|++|++++.+ +||++++||||++++
T Consensus 157 sl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~ 236 (543)
T 3ruv_A 157 SITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLN 236 (543)
T ss_dssp HHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEES
T ss_pred HhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEEEc
Confidence 9999999999999999999999999754 778899999999999999999999999999974 799999999999999
Q ss_pred cccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHH
Q psy17549 282 TPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIE 361 (418)
Q Consensus 282 ~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ 361 (418)
++|++++++.+ +++.+++++++.++.++|+++++.++++|.+.|+|||+++++|++.+++||.++||++++++++++|+
T Consensus 237 ~~Le~~k~e~~-~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le 315 (543)
T 3ruv_A 237 CAIEIKETETD-AEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDME 315 (543)
T ss_dssp SCBSCCCCSSC-CCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHH
T ss_pred ccccccccccC-ceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHH
Confidence 99999999985 88999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 362 RLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 362 ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
|||++|||+++++++++++++||+|+.|++.++|+++|+||++ ||++|||.+
T Consensus 316 ~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~t 373 (543)
T 3ruv_A 316 KLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTT 373 (543)
T ss_dssp HHHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESS
T ss_pred HHHHHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCC
Confidence 9999999999999999999999999999999999999999996 599999964
No 6
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.5e-78 Score=637.11 Aligned_cols=361 Identities=35% Similarity=0.508 Sum_probs=345.5
Q ss_pred cchhhccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHH
Q psy17549 46 NPVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILV 125 (418)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~ 125 (418)
+|..+++++++..+|.+|+.+|+.||..+|++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|||++
T Consensus 7 ~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~Akll~ 83 (548)
T 1q3q_A 7 QPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDS---LGDIVVTNDCATILDKIDLQHPAAKMMV 83 (548)
T ss_dssp --CCCSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECT---TCCEEEESCHHHHHHHSCCCSHHHHHHH
T ss_pred CCcccccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcC---CCCeEEECCHHHHHHHhhccchHHHHHH
Confidence 4667899999999999999999999999999999999999999999999 5999999999999999999999999999
Q ss_pred HhhhhccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHh
Q psy17549 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIART 205 (418)
Q Consensus 126 ~~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~t 205 (418)
++|++||+++||||||+++||++||+++++++.+|+||+.|++||++|++.++++|++++++++.. +++.|.++++|
T Consensus 84 e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---d~~~l~~va~t 160 (548)
T 1q3q_A 84 EVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPD---DEETLLKIAAT 160 (548)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTT---CHHHHHHHHHH
T ss_pred HHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998643 26899999999
Q ss_pred hccccccchhhHHHHHHHHHHHHHhhcc------CCCcceEEEEccCCCcccceeeeeEEEeccCCC-CCcceecCceEE
Q psy17549 206 TLSSKILSQHKEYFSKLAVDAVLRLKGS------GNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLL 278 (418)
Q Consensus 206 sl~sK~~~~~~~~ls~lvv~Av~~v~~~------~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~kIl 278 (418)
+++||+.++|+++|++|++||+.+++++ +|+++|+|+|++|++++||++++|++|++++.+ +||++++||||+
T Consensus 161 sl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIl 240 (548)
T 1q3q_A 161 SITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIA 240 (548)
T ss_dssp HSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEE
T ss_pred HhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEE
Confidence 9999999999999999999999999643 677899999999999999999999999999975 799999999999
Q ss_pred EeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHH
Q psy17549 279 IANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFD 358 (418)
Q Consensus 279 ll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~ 358 (418)
+++++||+++++.+ +++.+++++++..+.++|+++++.++++|.+.|++||+++++|++.+++||.++||+++++++++
T Consensus 241 l~~~~Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~ 319 (548)
T 1q3q_A 241 LINEALEVKKTETD-AKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKS 319 (548)
T ss_dssp EECSCBSCCCCSSC-CCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHH
T ss_pred EEecCcCcccccCC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHH
Confidence 99999999999985 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 359 GIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 359 ~L~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
+|+|||++|||+++++++++++++||+|+.|++.++|+++|++|++ |||+|||..
T Consensus 320 ~le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t 380 (548)
T 1q3q_A 320 DMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGT 380 (548)
T ss_dssp HHHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESS
T ss_pred HHHHHHHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCC
Confidence 9999999999999999999999999999999999999999999996 599999965
No 7
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=4.2e-78 Score=633.40 Aligned_cols=358 Identities=35% Similarity=0.510 Sum_probs=336.0
Q ss_pred chhhccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHH
Q psy17549 47 PVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVD 126 (418)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~ 126 (418)
|..+++++++..+|.+++.+|+.||..+|++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|||+++
T Consensus 7 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~Akll~e 83 (545)
T 1a6d_A 7 PILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDS---IGDIIISNDGATILKEMDVEHPTAKMIVE 83 (545)
T ss_dssp ----------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECS---SSCEEEECCHHHHHHHSCCCSHHHHHHHG
T ss_pred cccccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC---CCCeEEeCcHHHHHHhhhccchHHHHHHH
Confidence 667899999999999999999999999999999999999999999999 59999999999999999999999999999
Q ss_pred hhhhccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhh
Q psy17549 127 MSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTT 206 (418)
Q Consensus 127 ~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~ts 206 (418)
+|++||+++||||||+++||++||+++++++.+|+||+.|++||++|++.++++|++++++ + . +++.|.++++|+
T Consensus 84 ~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~-~---~~~~l~~va~ts 158 (545)
T 1a6d_A 84 VSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-S-T---DDATLRKIALTA 158 (545)
T ss_dssp GGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-C-C---CHHHHHHHHHHH
T ss_pred HHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-C-C---CHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998 4 2 268999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHhhcc------CCCcceEEEEccCCCcccceeeeeEEEeccCCC-CCcceecCceEEE
Q psy17549 207 LSSKILSQHKEYFSKLAVDAVLRLKGS------GNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLLI 279 (418)
Q Consensus 207 l~sK~~~~~~~~ls~lvv~Av~~v~~~------~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~kIll 279 (418)
++||+.++|+++|++|++||+.+++++ +|+++|+|+|++|++++||++++|++|++++.+ .||++++||||++
T Consensus 159 l~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll 238 (545)
T 1a6d_A 159 LSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIAL 238 (545)
T ss_dssp TTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEE
T ss_pred HhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEE
Confidence 999999999999999999999999643 677899999999999999999999999999975 7999999999999
Q ss_pred eecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHH
Q psy17549 280 ANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDG 359 (418)
Q Consensus 280 l~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~ 359 (418)
++++||+++++.+ +++.+++++++..+.++|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++++
T Consensus 239 ~~~~Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~ 317 (545)
T 1a6d_A 239 IDSALEIKKTEIE-AKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSD 317 (545)
T ss_dssp ECSCBSCCCCSSC-CEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHH
T ss_pred EecCCCcccccCC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHH
Confidence 9999999999985 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 360 IERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 360 L~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
|+|||++|||+++++++++++++||+|+.|++.++|+++|++|++ |||+|||.+
T Consensus 318 le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t 377 (545)
T 1a6d_A 318 MEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGT 377 (545)
T ss_dssp HHHHHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSS
T ss_pred HHHHHHHhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCC
Confidence 999999999999999999999999999999999999999999996 599999965
No 8
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-77 Score=625.72 Aligned_cols=352 Identities=27% Similarity=0.438 Sum_probs=335.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHHhhhhcccc
Q psy17549 55 AEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQDDE 134 (418)
Q Consensus 55 ~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~ 134 (418)
++.++|.+++.+|+.||+.||+++||||||+||+|||+++ .|+++|||||+|||++|+++||+|||++++|++||++
T Consensus 2 ~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e 78 (515)
T 3iyg_G 2 TKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDP---MGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEE 78 (515)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECC---CCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhh
Confidence 4678899999999999999999999999999999999999 5999999999999999999999999999999999999
Q ss_pred ccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhccccccch
Q psy17549 135 VGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQ 214 (418)
Q Consensus 135 ~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK~~~~ 214 (418)
+||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|++++++++.. +++.|.++|+|+++||..++
T Consensus 79 ~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---~~~~l~~va~tsl~sK~i~~ 155 (515)
T 3iyg_G 79 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTS---NRDTMLNIINSSITTKVISR 155 (515)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCC---CHHHHHHHHHHHhcCCchhh
Confidence 999999999999999999999999999999999999999999999999999987653 26889999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhc------cCCCc-ceEEEEccCCCcccceeeeeEEEeccCCC-CCcceecCceEEEeeccccc
Q psy17549 215 HKEYFSKLAVDAVLRLKG------SGNLS-AIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLLIANTPMDT 286 (418)
Q Consensus 215 ~~~~ls~lvv~Av~~v~~------~~~~~-~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~kIlll~~~Le~ 286 (418)
+.+.++++++||+..+.. ++|++ +|+|+|++||+++||++++|++|++++.+ .||++++||||++++++||+
T Consensus 156 ~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~ 235 (515)
T 3iyg_G 156 WSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEY 235 (515)
T ss_pred HHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEcccccc
Confidence 999999999999998862 14554 49999999999999999999999999975 69999999999999999999
Q ss_pred ccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHH
Q psy17549 287 DKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALV 366 (418)
Q Consensus 287 ~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~ 366 (418)
++++.+ +++.+++++++.++.++|++++++++++|.+.|++||+++++|++.+++||.++||++++++++++|+|||++
T Consensus 236 ~k~e~~-~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~ 314 (515)
T 3iyg_G 236 KKGESQ-TDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARA 314 (515)
T ss_pred cccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHH
Confidence 999985 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeeccccCCCCCCCcee-eeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 367 TGGEIVSTFDNPDQVKLGK-CDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 367 tGa~iv~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
|||+++++++++++++||+ |+.|++.++|+++|+||++ |||+|||.+
T Consensus 315 tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t 368 (515)
T 3iyg_G 315 CGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGAS 368 (515)
T ss_pred hCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCC
Confidence 9999999999999999999 9999999999999999985 699999964
No 9
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.7e-77 Score=625.63 Aligned_cols=352 Identities=34% Similarity=0.534 Sum_probs=334.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHHhhhhcccc
Q psy17549 55 AEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQDDE 134 (418)
Q Consensus 55 ~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~ 134 (418)
++.++|.+++.+|+.||+.+|++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|||++++|++||++
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~---~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e 79 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDD---IGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKE 79 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC---CCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhh
Confidence 4578899999999999999999999999999999999999 5999999999999999999999999999999999999
Q ss_pred ccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHh-hccccCCCchhhHHHHHHHHHhhccccccc
Q psy17549 135 VGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE-ASIDNGLNSEKFREDLLNIARTTLSSKILS 213 (418)
Q Consensus 135 ~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~-~s~~~~~~~~~~~~~L~~ia~tsl~sK~~~ 213 (418)
+||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|++ ++++++.. +++.|.++|+|+++||+.+
T Consensus 80 ~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~---~~e~l~~va~tsl~sK~~~ 156 (529)
T 3iyg_A 80 VGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDEL---GRDCLINAAKTSMSSKVIG 156 (529)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCC---CHHHHHHHHHHHhccCccc
Confidence 9999999999999999999999999999999999999999999999998 89887642 2688999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhhc-------cCCCcceEEEEccCCCcccceeeeeEEEeccCCC-CCcceecCceEEEeecccc
Q psy17549 214 QHKEYFSKLAVDAVLRLKG-------SGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLLIANTPMD 285 (418)
Q Consensus 214 ~~~~~ls~lvv~Av~~v~~-------~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~kIlll~~~Le 285 (418)
+++++|++|++||+.++++ ++|+++|+|+++.|++++||++++|++|++++.+ +||++++||||++++++|+
T Consensus 157 ~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le 236 (529)
T 3iyg_A 157 INGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQ 236 (529)
T ss_pred ccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCcc
Confidence 9999999999999999862 3567889999999999999999999999999874 7999999999999999999
Q ss_pred cccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHH
Q psy17549 286 TDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLAL 365 (418)
Q Consensus 286 ~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~ 365 (418)
+++++.+ +++.+++++++..+.++|+++++.++++|.+.|+|||+++++|++.+++||.++||++++++++++|+|||+
T Consensus 237 ~~k~e~~-~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~ 315 (529)
T 3iyg_A 237 KTKMKLG-VQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAK 315 (529)
T ss_pred cccccCC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHH
Confidence 9999984 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCeeccccCCCC------CCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 366 VTGGEIVSTFDNPD------QVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 366 ~tGa~iv~~l~~l~------~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
+|||++++++++++ +++||+|+.|+++++|+++|+||++ ||++|||.+
T Consensus 316 ~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t 375 (529)
T 3iyg_A 316 ASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGAN 375 (529)
T ss_pred HhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCch
Confidence 99999999987765 5789999999999999999999985 699999964
No 10
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=4.7e-79 Score=640.81 Aligned_cols=364 Identities=32% Similarity=0.477 Sum_probs=339.0
Q ss_pred cchhhccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHH
Q psy17549 46 NPVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILV 125 (418)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~ 125 (418)
.|..+++++++.++|.+++.+|+.||+.||++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|||++
T Consensus 8 ~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~ITnDG~TIlk~i~v~hP~Akll~ 84 (550)
T 3p9d_G 8 PTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTS---NQKTTISNDGATILKLLDVVHPAAKTLV 84 (550)
T ss_dssp --------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECS---SSCEEEECCHHHHTTTSCCCSHHHHHHH
T ss_pred cchhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECC---CCCeEEECCHHHHHHHccCCCHHHHHHH
Confidence 3677899999999999999999999999999999999999999999998 5999999999999999999999999999
Q ss_pred HhhhhccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHh
Q psy17549 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIART 205 (418)
Q Consensus 126 ~~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~t 205 (418)
++|++||+++||||||++|||++||++|.+++.+|+||+.|++||++|++.++++|++++++++.++..+++.|.++|+|
T Consensus 85 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~t 164 (550)
T 3p9d_G 85 DISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCART 164 (550)
T ss_dssp HHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHH
T ss_pred HHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999865322235789999999
Q ss_pred hccccccchhhHHHHHHHHHHHHHhh-ccCCCcceEEEEccCCCcccceeeeeEEEeccCCC----CCcceecCceEEEe
Q psy17549 206 TLSSKILSQHKEYFSKLAVDAVLRLK-GSGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ----HQPKRIENAKLLIA 280 (418)
Q Consensus 206 sl~sK~~~~~~~~ls~lvv~Av~~v~-~~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~----~~~~~i~n~kIlll 280 (418)
+++||+.+.++++|++|++||+.+++ +++|+++|+|++++|++++||++++|++|++++.+ .||++++||||+++
T Consensus 165 sl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kIll~ 244 (550)
T 3p9d_G 165 AMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSL 244 (550)
T ss_dssp HHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCEEEE
T ss_pred hccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceEEEe
Confidence 99999999999999999999999998 57899999999999999999999999999999864 68999999999999
Q ss_pred ecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHH
Q psy17549 281 NTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGI 360 (418)
Q Consensus 281 ~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L 360 (418)
+++||+++++.+ +++.+++++++.++.+.|++++++++++|.+.|++||+++++|+|.+++||+++||++++++++++|
T Consensus 245 ~~~Le~~k~e~~-~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~~l 323 (550)
T 3p9d_G 245 NVELELKAEKDN-AEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSADDM 323 (550)
T ss_dssp CSCCSCCCCSSC-EEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTTHH
T ss_pred cccccccccccc-ceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHHHH
Confidence 999999999884 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 361 ERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 361 ~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
+|||++|||++++++++++++++|+|+.|++.++|+++|++|++ |||+|||.+
T Consensus 324 erIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~t 382 (550)
T 3p9d_G 324 NRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGA 382 (550)
T ss_dssp HHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSS
T ss_pred HHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCc
Confidence 99999999999999999999999999999999999999999996 599999974
No 11
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.2e-77 Score=629.03 Aligned_cols=359 Identities=23% Similarity=0.352 Sum_probs=339.7
Q ss_pred hhhccchhhhhhh-HHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHH
Q psy17549 48 VRILKHEAEEEKS-EIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVD 126 (418)
Q Consensus 48 ~~~~~~~~~~~~~-~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~ 126 (418)
..+|++|++.++| ++|+.+|+.||+.||++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|||+++
T Consensus 11 ~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~ITnDG~TIlk~i~v~hP~Akll~e 87 (568)
T 3p9d_H 11 AGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNH---LGKIIITNDAATMLRELDIVHPAVKVLVM 87 (568)
T ss_dssp CSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECT---TSCEEEESCHHHHTTTCCCCCHHHHHHHH
T ss_pred hhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC---CCCeEEeCCHHHHHHHcccCCHHHHHHHH
Confidence 3578999999887 6799999999999999999999999999999999 59999999999999999999999999999
Q ss_pred hhhhccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhh
Q psy17549 127 MSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTT 206 (418)
Q Consensus 127 ~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~ts 206 (418)
+|++||+++||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|+++++++..+. .+++.|.++|+|+
T Consensus 88 ~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~-~~~~~l~~va~ts 166 (568)
T 3p9d_H 88 ATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDK-NDKNELLKMIKPV 166 (568)
T ss_dssp HHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCC-CTTHHHHHHHHHH
T ss_pred HHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCC-CCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998763221 2358899999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHhhc---------cCCCcceEEEEccCCCcccceeeeeEEEeccCCCCCcceec---C
Q psy17549 207 LSSKILSQHKEYFSKLAVDAVLRLKG---------SGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQHQPKRIE---N 274 (418)
Q Consensus 207 l~sK~~~~~~~~ls~lvv~Av~~v~~---------~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~~~~~~i~---n 274 (418)
++||+.+++ ++|++|++||+.++++ ++|+++|+|++++||+++||++++|++|++++ .+||++++ |
T Consensus 167 l~sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~-~~m~~~i~~~~n 244 (568)
T 3p9d_H 167 ISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREP-EGHVKSLSEDKK 244 (568)
T ss_dssp HTTTSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCB-SSGGGSCCCCSS
T ss_pred hhccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeecc-cCCcEEEecCCc
Confidence 999999887 9999999999999865 26788999999999999999999999999998 47999999 9
Q ss_pred ceEEEeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEec
Q psy17549 275 AKLLIANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEH 354 (418)
Q Consensus 275 ~kIlll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~ 354 (418)
|||++++++||+++++.+ +++.+++++++.++.++|++++++++++|.+.|++||+++++|++.+++||.++||+++++
T Consensus 245 ~kIlll~~~Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~ 323 (568)
T 3p9d_H 245 HKVAVFTCPLDIANTETK-GTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKV 323 (568)
T ss_dssp CEEEEECSCSSSCCCSSS-CEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECC
T ss_pred ceEEEEccCccccccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEec
Confidence 999999999999999985 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee--------eeEEEeCCC
Q psy17549 355 ADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV--------STYSISGFR 413 (418)
Q Consensus 355 v~~~~L~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~--------~t~~l~g~~ 413 (418)
+++++|+|||++|||+++++++++++++||+|+.|++.++|+++|++|++ |||+|||..
T Consensus 324 v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t 390 (568)
T 3p9d_H 324 PSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGAT 390 (568)
T ss_dssp CCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESC
T ss_pred CCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCc
Confidence 99999999999999999999999999999999999999999999999984 599999964
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.1e-76 Score=623.83 Aligned_cols=357 Identities=32% Similarity=0.500 Sum_probs=340.8
Q ss_pred hccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHHhhh
Q psy17549 50 ILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSK 129 (418)
Q Consensus 50 ~~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~~~~ 129 (418)
-|+++.+..+|.+|+.+|+.||..||++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|||++++|+
T Consensus 12 ~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 88 (559)
T 3p9d_A 12 TLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDD---IGDFTVTNDGATILSLLDVQHPAGKILVELAQ 88 (559)
T ss_dssp SCCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCS---SSCCCEECCHHHHHHHHCCCSHHHHHHHHHHH
T ss_pred hhhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcC---CCCEEEECCHHHHHHHhcCCCHHHHHHHHHHH
Confidence 478888899999999999999999999999999999999999999 59999999999999999999999999999999
Q ss_pred hccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHh-hccccCCCchhhHHHHHHHHHhhcc
Q psy17549 130 VQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALRE-ASIDNGLNSEKFREDLLNIARTTLS 208 (418)
Q Consensus 130 ~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~-~s~~~~~~~~~~~~~L~~ia~tsl~ 208 (418)
+|++++||||||++|||++||++|.+++.+|+||+.|++||++|++.++++|++ ++++++.. +++.|.++|+|+++
T Consensus 89 ~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~---~~e~L~~vA~tsl~ 165 (559)
T 3p9d_A 89 QQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTL---GKETLINIAKTSMS 165 (559)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC-----CTTHHHHHHHTTS
T ss_pred HHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCC---CHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999 99998752 14779999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHhh-------ccCCCcceEEEEccCCCcccceeeeeEEEeccCCC-CCcceec--CceEE
Q psy17549 209 SKILSQHKEYFSKLAVDAVLRLK-------GSGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIE--NAKLL 278 (418)
Q Consensus 209 sK~~~~~~~~ls~lvv~Av~~v~-------~~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~--n~kIl 278 (418)
||+.++|+++|++|+++|+.+++ +.+++++|+|++++|+++++|++++|++|++++.+ .||++++ ||||+
T Consensus 166 sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIl 245 (559)
T 3p9d_A 166 SKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIA 245 (559)
T ss_dssp SSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEE
T ss_pred cCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEE
Confidence 99999999999999999999997 24778899999999999999999999999999874 7999999 99999
Q ss_pred EeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHH
Q psy17549 279 IANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFD 358 (418)
Q Consensus 279 ll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~ 358 (418)
+++++|++++++.+ +++.+++++++..+.++|+++++.++++|.+.|++||+++++|++.+++||.++||+++++++++
T Consensus 246 l~~~~Le~~k~e~~-~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~ 324 (559)
T 3p9d_A 246 CLDLNLQKARMAMG-VQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKE 324 (559)
T ss_dssp EETTCCSCCCCCTT-CCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHH
T ss_pred EEeccccccccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHH
Confidence 99999999999984 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeecccc------CCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 359 GIERLALVTGGEIVSTF------DNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 359 ~L~ria~~tGa~iv~~l------~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
+|+|||++|||++++++ +++++++||+|+.|++.++|+++|++|++ ||++|||..
T Consensus 325 ~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t 391 (559)
T 3p9d_A 325 DLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSKHSSSSIILRGAN 391 (559)
T ss_dssp HHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESSSCCCCEEEEESC
T ss_pred HHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCC
Confidence 99999999999999998 78999999999999999999999999996 599999964
No 13
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.9e-76 Score=613.58 Aligned_cols=351 Identities=33% Similarity=0.484 Sum_probs=335.5
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHHhhhhccccc
Q psy17549 56 EEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQDDEV 135 (418)
Q Consensus 56 ~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~~ 135 (418)
+.++|.+++.+|+.||+.+|++++|||||+||+|||+++ .|+++|||||+||+++|+++||+|||++++|++||+++
T Consensus 5 ~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~ 81 (518)
T 3iyg_D 5 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDG---KGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEA 81 (518)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCC---CCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhh
Confidence 457899999999999999999999999999999999999 59999999999999999999999999999999999999
Q ss_pred cCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhccccccchh
Q psy17549 136 GDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQH 215 (418)
Q Consensus 136 GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK~~~~~ 215 (418)
||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|++++++++.. +++.|.++|+|+++||+.++|
T Consensus 82 GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---~~~~l~~vA~tsl~sK~~~~~ 158 (518)
T 3iyg_D 82 GDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELS---DRETLLNSAATSLNSKVVSQY 158 (518)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCC---ChHHHHHHhHhhhccccchhh
Confidence 99999999999999999999999999999999999999999999999999988642 258899999999999999999
Q ss_pred hHHHHHHHHHHHHHhhc-----cCCCcceEEEEccCCCcccceeeeeEEEeccCCCCCcceecCceEEEeeccccccccc
Q psy17549 216 KEYFSKLAVDAVLRLKG-----SGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQHQPKRIENAKLLIANTPMDTDKIK 290 (418)
Q Consensus 216 ~~~ls~lvv~Av~~v~~-----~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~~~~~~i~n~kIlll~~~Le~~k~e 290 (418)
.++|++|++||+.++++ .+|+++|+|+++.||+++||++++|++|++++.++||++++||||++++++||+++++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~ 238 (518)
T 3iyg_D 159 SSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTD 238 (518)
T ss_pred HHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEecccccCCCccccCceEEEEEeeccccccc
Confidence 99999999999999974 3678899999999999999999999999999977899999999999999999999998
Q ss_pred ccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEe-----ccccccchHHHHHHcCceEEecCCHHHHHHHHH
Q psy17549 291 VFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFIN-----RQLIYNYPEQLFADAGVMAIEHADFDGIERLAL 365 (418)
Q Consensus 291 ~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~-----~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~ 365 (418)
+ ++++.+++++++.++.++|+++++.++++|.+.|++||++ +++|++.+++||.++||++++++++.+|+|||+
T Consensus 239 ~-~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~ 317 (518)
T 3iyg_D 239 M-DNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICK 317 (518)
T ss_pred c-CceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHH
Confidence 6 4889999999999999999999999999999999999999 799999999999999999999999999999999
Q ss_pred HhCCeeccccCCCCCCCceeeeeEEEEEECc-eeEEEEee-------eeEEEeCCC
Q psy17549 366 VTGGEIVSTFDNPDQVKLGKCDLIEEVCLWT-KNVTGPTV-------STYSISGFR 413 (418)
Q Consensus 366 ~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~-~~~~~~~~-------~t~~l~g~~ 413 (418)
+|||+++++++++++++||+|+.|++.++|+ ++|++|++ ||++|||.+
T Consensus 318 ~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~t 373 (518)
T 3iyg_D 318 TIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSN 373 (518)
T ss_pred HhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCC
Confidence 9999999999999999999999999999999 89999985 599999964
No 14
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.1e-76 Score=624.21 Aligned_cols=379 Identities=33% Similarity=0.506 Sum_probs=338.5
Q ss_pred hhhhhhhhhcccccCcchhhccchh--hhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHH
Q psy17549 31 LPKFFDSCFTFQVSLNPVRILKHEA--EEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGA 108 (418)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~ 108 (418)
.|+++.....+....+|..+++++. +..+|.+|+.+|+.||+.||++++|||||+||+|||+++ .|+++|||||+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~iTnDG~ 88 (562)
T 3p9d_E 12 MPDLSNAIVAQDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISP---DGEITITNDGA 88 (562)
T ss_dssp ------------------CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECS---SSCEEEESCHH
T ss_pred CcccchhhHHHHhcCCCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC---CCCEEEECCHH
Confidence 3444433333333346777777763 567899999999999999999999999999999999999 59999999999
Q ss_pred HHHHhccccChHHHHHHHhhhhccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhcccc
Q psy17549 109 TILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDN 188 (418)
Q Consensus 109 tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~ 188 (418)
|||++|+++||+|||++++|++||+++||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|+++++++
T Consensus 89 tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v 168 (562)
T 3p9d_E 89 TILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDI 168 (562)
T ss_dssp HHHHHSCCCSHHHHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSS
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCc-hhhHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHhhc----cCCCcceEEEEccCCCcccceeeeeEEEecc
Q psy17549 189 GLNS-EKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRLKG----SGNLSAIQIIKKKGGCLEDSFLDEGFLLDKK 263 (418)
Q Consensus 189 ~~~~-~~~~~~L~~ia~tsl~sK~~~~~~~~ls~lvv~Av~~v~~----~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~ 263 (418)
+.+. +.+++.|.++|+|+++||+.+.+.+.|+++++||+..+.+ ++|+++|+|++++||+++||++++|++|+++
T Consensus 169 ~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~ 248 (562)
T 3p9d_E 169 SASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKD 248 (562)
T ss_dssp SBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSC
T ss_pred CCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecC
Confidence 6531 1234789999999999999999999999999999998854 5788999999999999999999999999999
Q ss_pred CCC-CCccee------cCceEEEeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEecccc
Q psy17549 264 IGQ-HQPKRI------ENAKLLIANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLI 336 (418)
Q Consensus 264 ~~~-~~~~~i------~n~kIlll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I 336 (418)
+.+ .||+++ +|+||+++++||++.+.+.+ +++.+++++++..+.++|+++++.++++|.+.|++||+++++|
T Consensus 249 ~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~-~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I 327 (562)
T 3p9d_E 249 FSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTK-HKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGF 327 (562)
T ss_dssp CCTTSCCC-----TTCSSCEECEEESCCSSCCCSSC-CCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSC
T ss_pred CCCCCcCcccccccccccceEEEecccccccccccC-ceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 974 789988 99999999999999998874 7889999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHcCceEEecCCHHHHHHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECc--eeEEEEee------eeEE
Q psy17549 337 YNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWT--KNVTGPTV------STYS 408 (418)
Q Consensus 337 ~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~------~t~~ 408 (418)
++.+++||.++||++++++++++|+|||++|||+++++++++++++||+|+.|+++++|+ ++|++|++ ||++
T Consensus 328 ~~~Al~~L~~~~I~~v~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIl 407 (562)
T 3p9d_E 328 DDEANHLLLQNDLPAVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCF 407 (562)
T ss_dssp CSHHHHHHHTTTCCCEECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEE
T ss_pred CHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEE
Confidence 999999999999999999999999999999999999999999999999999999999996 89999985 5999
Q ss_pred EeCCC
Q psy17549 409 ISGFR 413 (418)
Q Consensus 409 l~g~~ 413 (418)
|||.+
T Consensus 408 lrG~t 412 (562)
T 3p9d_E 408 VRGSN 412 (562)
T ss_dssp EECTT
T ss_pred EeCCC
Confidence 99964
No 15
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=4.9e-77 Score=627.58 Aligned_cols=352 Identities=25% Similarity=0.431 Sum_probs=334.0
Q ss_pred cchhhccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHH
Q psy17549 46 NPVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILV 125 (418)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~ 125 (418)
.|+.+++++++.++|.+|+.+|+.||..+|+++++||||+||+|||+++ .|+++|||||+||+++|+++||+|+|++
T Consensus 3 ~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~ITnDG~TIlk~i~~~hP~Akll~ 79 (590)
T 3p9d_C 3 APVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDP---MGGLVLTNDGHAILREIDVAHPAAKSML 79 (590)
T ss_dssp ---CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECT---TTCCBCCCCHHHHHHHSCCCCHHHHTHH
T ss_pred CCeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECC---CCCeEEECCHHHHHHHhhCCCHHHHHHH
Confidence 4778899999999999999999999999999999999999999999998 5999999999999999999999999999
Q ss_pred HhhhhccccccCCceehHhHHHHHHHHHHHH-HHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHH
Q psy17549 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKL-IDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIAR 204 (418)
Q Consensus 126 ~~~~~~~~~~GDGttt~viLa~~Ll~~a~~l-i~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~ 204 (418)
++|++||+++||||||+++||++||++|.++ +.+|+||+.|++||++|++.++++|++++++++.++ ++.|.++|+
T Consensus 80 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~---~e~L~~vA~ 156 (590)
T 3p9d_C 80 ELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVEN---DAAMKKLIQ 156 (590)
T ss_dssp HHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCC---THHHHHHHT
T ss_pred HHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCC---HHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999999999999999999876532 478999999
Q ss_pred hhccccccchhhHHHHHHHHHHHHHhhcc------------CCCc-ceEEEEccCCCcccceeeeeEEEeccCCC-CCcc
Q psy17549 205 TTLSSKILSQHKEYFSKLAVDAVLRLKGS------------GNLS-AIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPK 270 (418)
Q Consensus 205 tsl~sK~~~~~~~~ls~lvv~Av~~v~~~------------~~~~-~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~ 270 (418)
|+++||+.++|+++|++|++||+.+++++ .|++ +|+|+|++||+++||++++|++|++++.+ .||+
T Consensus 157 tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~ 236 (590)
T 3p9d_C 157 ASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSR 236 (590)
T ss_dssp TTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCS
T ss_pred HHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcc
Confidence 99999999999999999999999998753 2333 79999999999999999999999999875 6999
Q ss_pred eecCceEEEeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCce
Q psy17549 271 RIENAKLLIANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVM 350 (418)
Q Consensus 271 ~i~n~kIlll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~ 350 (418)
+++||||++++++||++|++. ++++.+++++++.++.+.|++++++++++|.+.|++||+++++|++.+++||.++||+
T Consensus 237 ~~en~kIll~d~~Le~~K~e~-~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~ 315 (590)
T 3p9d_C 237 HIENPRVVLLDCPLEYKKGES-QTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCS 315 (590)
T ss_dssp CEESCCEECCCCCCSCCCCTT-TEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCC
T ss_pred eeeeeEEEEEccccccccccc-CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccce
Confidence 999999999999999999988 4889999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHHHhCCeeccccCCCCCCCcee-eeeEEEEEECceeEEEEee
Q psy17549 351 AIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGK-CDLIEEVCLWTKNVTGPTV 404 (418)
Q Consensus 351 vv~~v~~~~L~ria~~tGa~iv~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~ 404 (418)
+++++++++|+|||++|||+++++++++++++||+ |+.|+++.+|+++|++|++
T Consensus 316 av~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g 370 (590)
T 3p9d_C 316 VLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDN 370 (590)
T ss_dssp CCCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC
T ss_pred eeccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeC
Confidence 99999999999999999999999999999999999 9999999999999999985
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-75 Score=611.47 Aligned_cols=354 Identities=34% Similarity=0.489 Sum_probs=336.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHHhhhhcccc
Q psy17549 55 AEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQDDE 134 (418)
Q Consensus 55 ~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~ 134 (418)
++..+|.+|+.+|+.||+.+|++++|||||+||+|||+++ .|+++|||||+||+++|+++||+|+|++++|++|+++
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~ 79 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDK---DGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDE 79 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcC---CCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 4567899999999999999999999999999999999999 5999999999999999999999999999999999999
Q ss_pred ccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhccccccch
Q psy17549 135 VGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQ 214 (418)
Q Consensus 135 ~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK~~~~ 214 (418)
+||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|+++++++..+. .+++.|.++|+|+++||+.+.
T Consensus 80 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~-~~~~~l~~vA~tsl~sK~i~~ 158 (515)
T 3iyg_E 80 IGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDM-KNTEPLIQTAKTTLGSKVVNS 158 (515)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCc-cCHHHHHHHHHHHhcccchhH
Confidence 9999999999999999999999999999999999999999999999999999886431 236889999999999999888
Q ss_pred hhHHHHHHHHHHHHHhhc----cCCCcceEEEEccCCCcccceeeeeEEEeccCCC-CCcceecCceEEEeecccccccc
Q psy17549 215 HKEYFSKLAVDAVLRLKG----SGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLLIANTPMDTDKI 289 (418)
Q Consensus 215 ~~~~ls~lvv~Av~~v~~----~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~kIlll~~~Le~~k~ 289 (418)
+.+.|+++++||+..+.. ++|+++|+|++++||+++||++++|++|++++.+ .||++++||||+++++||++.++
T Consensus 159 ~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~ 238 (515)
T 3iyg_E 159 CHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKP 238 (515)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCccccccc
Confidence 999999999999998864 3778899999999999999999999999999974 79999999999999999999998
Q ss_pred cccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHHhCC
Q psy17549 290 KVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGG 369 (418)
Q Consensus 290 e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa 369 (418)
+.+ +++.+++++++..+.++|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++++|+|||++|||
T Consensus 239 ~~~-~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa 317 (515)
T 3iyg_E 239 KTK-HKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGG 317 (515)
T ss_pred ccc-ceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCC
Confidence 874 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCCCCCCceeeeeEEEEEECc--eeEEEEee------eeEEEeCCC
Q psy17549 370 EIVSTFDNPDQVKLGKCDLIEEVCLWT--KNVTGPTV------STYSISGFR 413 (418)
Q Consensus 370 ~iv~~l~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~------~t~~l~g~~ 413 (418)
+++++++++++++||+|+.|+++++|+ ++|++|++ ||++|||.+
T Consensus 318 ~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~t 369 (515)
T 3iyg_E 318 RIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGN 369 (515)
T ss_pred EEecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCc
Confidence 999999999999999999999999998 89999985 699999964
No 17
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.6e-76 Score=612.01 Aligned_cols=350 Identities=30% Similarity=0.463 Sum_probs=334.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHHhhhhcccc
Q psy17549 55 AEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQDDE 134 (418)
Q Consensus 55 ~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~ 134 (418)
.+..+|.+|+.+|+.||+.+|++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|+|++++|++||++
T Consensus 3 ~~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~---~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e 79 (517)
T 3iyg_Z 3 AEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSG---AGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDI 79 (517)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECC---CCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999 5999999999999999999999999999999999999
Q ss_pred ccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhccccccch
Q psy17549 135 VGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQ 214 (418)
Q Consensus 135 ~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK~~~~ 214 (418)
+||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|++++++++.+ ++.|.++|+|+++||+.+.
T Consensus 80 ~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~----~~~L~~va~tsl~sKi~~~ 155 (517)
T 3iyg_Z 80 TGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMD----RETLIDVARTSLRTKVHAE 155 (517)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCC----HHHHHHHHHHHhccccchh
Confidence 999999999999999999999999999999999999999999999999999887643 5889999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhc---cCCCcceEEEEccCCCcccceeeeeEEEeccCCC-CCcceecCceEEEeeccccccccc
Q psy17549 215 HKEYFSKLAVDAVLRLKG---SGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLLIANTPMDTDKIK 290 (418)
Q Consensus 215 ~~~~ls~lvv~Av~~v~~---~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~kIlll~~~Le~~k~e 290 (418)
+.+.|+++++||+..+.. .+|+++|+|+|++||+.+||++++|++|++++.+ .||++++||||++++++||+++++
T Consensus 156 ~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e 235 (517)
T 3iyg_Z 156 LADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTE 235 (517)
T ss_pred HHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEecccccccccc
Confidence 999999999999998853 4788999999999999999999999999999864 799999999999999999999999
Q ss_pred ccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCce---------EEEeccccccchHHHHHHcCceEEecCCHHHHH
Q psy17549 291 VFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNAN---------VFINRQLIYNYPEQLFADAGVMAIEHADFDGIE 361 (418)
Q Consensus 291 ~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~---------vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ 361 (418)
.+ +++.++++++++++.++|++++++.+++|.+.+++ ||+++++|+|.+++||.++||++++++++++|+
T Consensus 236 ~~-~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~le 314 (517)
T 3iyg_Z 236 VN-SGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNME 314 (517)
T ss_pred cc-eeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHH
Confidence 85 88999999999999999999999999999999877 599999999999999999999999999999999
Q ss_pred HHHHHhCCeeccccCCCCCCC-ceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 362 RLALVTGGEIVSTFDNPDQVK-LGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 362 ria~~tGa~iv~~l~~l~~~~-lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
|||++|||+++++++++++++ ||+|+ |++.++|+++|+||++ ||++|||.+
T Consensus 315 ria~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t 372 (517)
T 3iyg_Z 315 RLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPN 372 (517)
T ss_pred HHHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCc
Confidence 999999999999999999999 99999 9999999999999996 599999964
No 18
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=3.8e-77 Score=624.61 Aligned_cols=364 Identities=64% Similarity=0.948 Sum_probs=344.3
Q ss_pred chhhccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccc-cccCCCCeEEccCHHHHHHhccccChHHHHHH
Q psy17549 47 PVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVS-MGRNSGQVEITNDGATILKSVGVDNPAAKILV 125 (418)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~-~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~ 125 (418)
++.+++++++..+|++|+.+|+.||+.+|++++|||||+||+|||++ + .|+++|||||+||+++|+++||+|||++
T Consensus 2 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~---~G~~~iTnDG~tIlk~i~~~hP~Akll~ 78 (527)
T 3p9d_B 2 SVQIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSAS---SNTCMVTNDGATILKSIPLDNPAAKVLV 78 (527)
T ss_dssp -CCSSCSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTT---TCCEECCCCHHHHHHTCCCCCHHHHHHH
T ss_pred ceehhcCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecC---CCCeEEeCCHHHHHHHhccCCHHHHHHH
Confidence 44678999999999999999999999999999999999999999999 7 5999999999999999999999999999
Q ss_pred HhhhhccccccCCceehHhHHHHHHHHHHHHHHc-CCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHH
Q psy17549 126 DMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQ-RLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIAR 204 (418)
Q Consensus 126 ~~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~-Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~ 204 (418)
++|++||+++||||||++|||++||++|.+++.+ |+||+.|++||++|++.++++|+++++++..++..+++.|.++|+
T Consensus 79 e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~ 158 (527)
T 3p9d_B 79 NISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAK 158 (527)
T ss_dssp HHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999999999999999887653344689999999
Q ss_pred hhccccccchhhHHHHHHHHHHHHHhhccCCCcceEEEEccCCCcccceeeeeEEEeccCCCCCcceecCceEEEeeccc
Q psy17549 205 TTLSSKILSQHKEYFSKLAVDAVLRLKGSGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQHQPKRIENAKLLIANTPM 284 (418)
Q Consensus 205 tsl~sK~~~~~~~~ls~lvv~Av~~v~~~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~~~~~~i~n~kIlll~~~L 284 (418)
|+++||+.++++++|++|++||+.+++++.|++.|+|+++.||+++||++++|++|++++.+.+|++++||||++++++|
T Consensus 159 tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~p~~~~n~kIlll~~~l 238 (527)
T 3p9d_B 159 TTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIANTTL 238 (527)
T ss_dssp HHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSCCSCCSSCEEEEECSCS
T ss_pred hccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCCCeeeecceEEEecccc
Confidence 99999999999999999999999999888888899999999999999999999999999987669999999999999999
Q ss_pred ccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHH
Q psy17549 285 DTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLA 364 (418)
Q Consensus 285 e~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria 364 (418)
|+++++..++++.+++++++..+.++|+++++.++++|.+.|++||+++++|++.+++||.++||++++++++.+|+|+|
T Consensus 239 e~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~ia 318 (527)
T 3p9d_B 239 DTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLA 318 (527)
T ss_dssp SCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHHH
T ss_pred ccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHHH
Confidence 99999832477889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 365 LVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 365 ~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
++|||+++++++++++++||+|+.|+++.+|+++|++|++ ||++|||..
T Consensus 319 ~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~t 373 (527)
T 3p9d_B 319 LVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGAT 373 (527)
T ss_dssp HHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTC
T ss_pred HHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCC
Confidence 9999999999999999999999999999999999999986 699999965
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.9e-75 Score=607.46 Aligned_cols=352 Identities=23% Similarity=0.331 Sum_probs=332.7
Q ss_pred chhhhhhh-HHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHHhhhhc
Q psy17549 53 HEAEEEKS-EIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQ 131 (418)
Q Consensus 53 ~~~~~~~~-~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~~~~~~ 131 (418)
||+++++| ++|+.+|+.||+.||++++|||||+||+|||+++ .|+++|||||+||+++|+++||+|||++++|++|
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~q 77 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINH---LEKLFVTNDAATILRELEVQHPAAKMIVMASHMQ 77 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC---CCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHh
Confidence 57788899 8999999999999999999999999999999999 5999999999999999999999999999999999
Q ss_pred cccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhcc--ccCCCchhhHHHHHHHHHhhccc
Q psy17549 132 DDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASI--DNGLNSEKFREDLLNIARTTLSS 209 (418)
Q Consensus 132 ~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~--~~~~~~~~~~~~L~~ia~tsl~s 209 (418)
|+++||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|+++++ +.+. .+++.|.++|+|+++|
T Consensus 78 d~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~---~~~~~l~~va~tsl~s 154 (512)
T 3iyg_Q 78 EQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNL---RDVDEVSSLLHTSVMS 154 (512)
T ss_pred hhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCC---CCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999855 2222 2368899999999999
Q ss_pred cccchhhHHHHHHHHHHHHHhhcc---CCCcceEEEEccCCCcccceeeeeEEEeccCCCCCcceecCceEEEeeccccc
Q psy17549 210 KILSQHKEYFSKLAVDAVLRLKGS---GNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQHQPKRIENAKLLIANTPMDT 286 (418)
Q Consensus 210 K~~~~~~~~ls~lvv~Av~~v~~~---~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~~~~~~i~n~kIlll~~~Le~ 286 (418)
|+.+ ++++|++|+++|+.+++++ +++++|+|.|++||++.+|++++|++|++++.+ ||++++|+||+++++||++
T Consensus 155 K~~~-~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~-~~~~~~n~kI~ll~~~le~ 232 (512)
T 3iyg_Q 155 KQYG-NEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG-DVTSVKDAKIAVYSCPFDG 232 (512)
T ss_pred CCcc-chHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC-CCcccccCceEEEeccccc
Confidence 9765 6899999999999999753 677899999999999999999999999999865 9999999999999999999
Q ss_pred ccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHH
Q psy17549 287 DKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALV 366 (418)
Q Consensus 287 ~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~ 366 (418)
.+++.+ +++.+++++++.++.++|++++++++++|.+.|++||+++++|++++++||+++||++++++++.+|+|||++
T Consensus 233 ~~~e~k-~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~ 311 (512)
T 3iyg_Q 233 MITETK-GTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKT 311 (512)
T ss_pred cccccc-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHH
Confidence 999875 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee-------eeEEEeCCC
Q psy17549 367 TGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV-------STYSISGFR 413 (418)
Q Consensus 367 tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~-------~t~~l~g~~ 413 (418)
|||+++++++++++++||+|+.|++.++|+++|++|++ |||+|||.+
T Consensus 312 tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~t 365 (512)
T 3iyg_Q 312 VGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGST 365 (512)
T ss_pred hCCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCc
Confidence 99999999999999999999999999999999999974 699999965
No 20
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=8e-76 Score=614.00 Aligned_cols=356 Identities=29% Similarity=0.449 Sum_probs=339.2
Q ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHHhhhh
Q psy17549 51 LKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKV 130 (418)
Q Consensus 51 ~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~~~~~ 130 (418)
++.+.+..+|.+|+.+|+.||+.+|++++|||||+||+|||+++ .|+++|||||+||+++|+++||+|+|++++|++
T Consensus 8 ~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~ 84 (528)
T 3p9d_D 8 NATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTS---RGEIIISNDGHTILKQMAILHPVARMLVEVSAA 84 (528)
T ss_dssp CCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECS---SCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHH
T ss_pred ccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcC---CCCeEEECCHHHHHHHcccCCHHHHHHHHHHHH
Confidence 45566778999999999999999999999999999999999999 599999999999999999999999999999999
Q ss_pred ccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhcccc
Q psy17549 131 QDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSK 210 (418)
Q Consensus 131 ~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK 210 (418)
||+++||||||++|||++||++|.+++.+|+||+.|++||++|++.++++|++++++++.. +++.|.++|+|+++||
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~---~~e~l~~va~tsl~sK 161 (528)
T 3p9d_D 85 QDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLS---DREQLVRAASTSLSSK 161 (528)
T ss_dssp HHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSC---CHHHHHHHHHHHSCSS
T ss_pred hhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCC---CHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999988643 2688999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHhhc----cCCCcceEEEEccCCCcccceeeeeEEEeccCCC-C-CcceecCceEEEeeccc
Q psy17549 211 ILSQHKEYFSKLAVDAVLRLKG----SGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-H-QPKRIENAKLLIANTPM 284 (418)
Q Consensus 211 ~~~~~~~~ls~lvv~Av~~v~~----~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~-~~~~i~n~kIlll~~~L 284 (418)
+.++|+++|++|++||+.++++ .+++++|+|+|++|++++||++++|++|++++.+ . ||++++||||++++++|
T Consensus 162 ~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~l 241 (528)
T 3p9d_D 162 IVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQI 241 (528)
T ss_dssp SCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCS
T ss_pred ccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEEEeccc
Confidence 9999999999999999999964 4677899999999999999999999999999874 4 99999999999999999
Q ss_pred ccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEecccc-----ccchHHHHHHcCceEEecCCHHH
Q psy17549 285 DTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLI-----YNYPEQLFADAGVMAIEHADFDG 359 (418)
Q Consensus 285 e~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I-----~d~a~~~l~~~gI~vv~~v~~~~ 359 (418)
++++++.+ +++.+++++++..+.++|+++++.++++|.+.|++||+++++| ++.+++||.++||++++++++++
T Consensus 242 e~~k~~~~-~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~ 320 (528)
T 3p9d_D 242 SPPKPDTE-NNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREE 320 (528)
T ss_dssp SCCCCSSE-EEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHH
T ss_pred cccccccC-ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHH
Confidence 99999885 8999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee---------eeEEEeCCC
Q psy17549 360 IERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV---------STYSISGFR 413 (418)
Q Consensus 360 L~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~---------~t~~l~g~~ 413 (418)
|+|||++|||+++++++++++++||+|+.|++.++|+++|++|++ ||++|||.+
T Consensus 321 le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~t 383 (528)
T 3p9d_D 321 IEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGAN 383 (528)
T ss_dssp HHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSS
T ss_pred HHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCC
Confidence 999999999999999999999999999999999999999999963 689999965
No 21
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=2.5e-76 Score=620.49 Aligned_cols=362 Identities=29% Similarity=0.415 Sum_probs=340.9
Q ss_pred chhhccchhhhhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChHHHHHHH
Q psy17549 47 PVRILKHEAEEEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVD 126 (418)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~ 126 (418)
+..+++++++.++|.+|+.+|+.||+.||++++|||||+||+|||+++ .|+++|||||+|||++|+++||+|+|+++
T Consensus 2 ~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~---~G~~~iTnDG~tIlk~i~v~hP~akll~e 78 (546)
T 3p9d_F 2 SLQLLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDG---AGNIKLTKDGKVLLTEMQIQSPTAVLIAR 78 (546)
T ss_dssp CCCSSCTTEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECT---TSCEEEECCHHHHHHTSCCCCHHHHHHHH
T ss_pred cccccCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECC---CCCEEEECCHHHHHHHccCcCHHHHHHHH
Confidence 445788899999999999999999999999999999999999999999 59999999999999999999999999999
Q ss_pred hhhhccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhh
Q psy17549 127 MSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTT 206 (418)
Q Consensus 127 ~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~ts 206 (418)
+|++||+++||||||++|||++||++|.+++.+|+||+.|++||++|++.++++|+++++++..+. .+++.|.++|+|+
T Consensus 79 ~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~-~~~~~L~~vA~ts 157 (546)
T 3p9d_F 79 AAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLS-NDREFLLQVARSS 157 (546)
T ss_dssp HHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSS-TTCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccc-cCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999876321 1258899999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHhhc----cCCCcceEEEEccCCCcccceeeeeEEEeccCCC-CCcceecCceEEEee
Q psy17549 207 LSSKILSQHKEYFSKLAVDAVLRLKG----SGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLLIAN 281 (418)
Q Consensus 207 l~sK~~~~~~~~ls~lvv~Av~~v~~----~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~kIlll~ 281 (418)
++||+.+.+.+.|+++++||+..+.+ ++|+++|+|+|++||+.+||++++|++|++++.+ .||++++||||++++
T Consensus 158 l~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~ 237 (546)
T 3p9d_F 158 LLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILN 237 (546)
T ss_dssp TCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEEC
T ss_pred hCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEec
Confidence 99999999999999999999998852 5788999999999999999999999999999874 799999999999999
Q ss_pred cccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccC----------ceEEEeccccccchHHHHHHcCceE
Q psy17549 282 TPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHN----------ANVFINRQLIYNYPEQLFADAGVMA 351 (418)
Q Consensus 282 ~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~g----------v~vVl~~~~I~d~a~~~l~~~gI~v 351 (418)
|+||+++++.+ +++.+++++++..+.++|++++++.+++|...+ ++||+++++|++.+++||.++||++
T Consensus 238 ~~Le~~k~e~~-~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~ 316 (546)
T 3p9d_F 238 VSLEYEKTEVN-SGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILA 316 (546)
T ss_dssp CCSSSCCCSSC-BCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEE
T ss_pred CcccccccccC-ceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCee
Confidence 99999999985 889999999999999999999999999998764 2499999999999999999999999
Q ss_pred EecCCHHHHHHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEee------eeEEEeCCC
Q psy17549 352 IEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTV------STYSISGFR 413 (418)
Q Consensus 352 v~~v~~~~L~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~------~t~~l~g~~ 413 (418)
++|+++++|+|||++|||+++++++++++++||+|+.|+++++|+++|+||++ |||+|||.+
T Consensus 317 vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t 384 (546)
T 3p9d_F 317 LRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPKSCTILIKGST 384 (546)
T ss_dssp ECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSC
T ss_pred EecCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCCceEEEEECCCC
Confidence 99999999999999999999999999999999999999999999999999986 699999964
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3e-67 Score=546.30 Aligned_cols=317 Identities=34% Similarity=0.493 Sum_probs=238.9
Q ss_pred cccccccCCCCeEEccCHHHHHHhccccChHHHHHHHhhhhccccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHH
Q psy17549 90 ILVSMGRNSGQVEITNDGATILKSVGVDNPAAKILVDMSKVQDDEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAG 169 (418)
Q Consensus 90 mi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~akll~~~~~~~~~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g 169 (418)
||+++ .|+++|||||+|||++|+++||+|||++++|++||+++||||||+++||++||++|.+++++|+||+.|++|
T Consensus 1 mlv~~---~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G 77 (500)
T 3aq1_B 1 MLVDS---MGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEG 77 (500)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CccCC---CCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 67887 599999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHhhcc------CC-CcceEEE
Q psy17549 170 WRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILSQHKEYFSKLAVDAVLRLKGS------GN-LSAIQII 242 (418)
Q Consensus 170 ~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK~~~~~~~~ls~lvv~Av~~v~~~------~~-~~~I~I~ 242 (418)
|++|++.++++|++++++++.+ +++.|.++|+|+++||+.++|+++|++|+++|+.+++++ +| +++|+|+
T Consensus 78 ~~~A~~~a~~~L~~~s~~v~~~---d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~ 154 (500)
T 3aq1_B 78 YRHAAEKCREILETITIAISPD---DEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIE 154 (500)
T ss_dssp HHHHHHHHHHHHHHHCEECCTT---CHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCC---cHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEE
Confidence 9999999999999999998643 268999999999999999999999999999999999754 44 6789999
Q ss_pred EccCCCcccceeeeeEEEeccCCC-CCcceecCceEEEeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHH
Q psy17549 243 KKKGGCLEDSFLDEGFLLDKKIGQ-HQPKRIENAKLLIANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEK 321 (418)
Q Consensus 243 ki~Ggs~~dS~lv~Givl~~~~~~-~~~~~i~n~kIlll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~ 321 (418)
|++|+++++|++++|++|++++.+ +||++++||||++++++||+++++.+ +++.+++++++..+.++|+++++.++++
T Consensus 155 k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~-~~v~i~~~~~l~~~~~~E~~~l~~~le~ 233 (500)
T 3aq1_B 155 KRAGGSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVD-SEIKITSPGQMQLFLDQEEKMMREMAEK 233 (500)
T ss_dssp EEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC--------------------------CHHHHHHHH
T ss_pred EecCCCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccc-eeEeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999975 79999999999999999999999984 8899999999999999999999999999
Q ss_pred HHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEE
Q psy17549 322 ILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTG 401 (418)
Q Consensus 322 I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~ 401 (418)
|.+.|++||+++++|++.+++||.++||++++++++++|+|||++|||+++++++++++++||+|+.|++.++|+++|++
T Consensus 234 I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~ 313 (500)
T 3aq1_B 234 VIASGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTY 313 (500)
T ss_dssp HHTTCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEE
T ss_pred HHHhCcCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Eee------eeEEEeCCC
Q psy17549 402 PTV------STYSISGFR 413 (418)
Q Consensus 402 ~~~------~t~~l~g~~ 413 (418)
|++ ||++|||.+
T Consensus 314 ~~g~~~~~~~TI~lrG~t 331 (500)
T 3aq1_B 314 VTGCQNSKAVTVLLHGGT 331 (500)
T ss_dssp EEEETTCCCEEEEEEESS
T ss_pred EECCCCCceEEEEecCCc
Confidence 996 599999965
No 23
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1e-59 Score=492.35 Aligned_cols=301 Identities=21% Similarity=0.319 Sum_probs=272.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccCh----HHHHHHHhhhhcc
Q psy17549 57 EEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNP----AAKILVDMSKVQD 132 (418)
Q Consensus 57 ~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP----~akll~~~~~~~~ 132 (418)
..+|.++|.+|+.||..+|+++++||||+||+|||+++ +|+++|||||+||+++|+++|| +|||++++|++||
T Consensus 5 ~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~---~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd 81 (547)
T 1kp8_A 5 VKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKS---FGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81 (547)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCS---SSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECC---CCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhc
Confidence 35789999999999999999999999999999999999 5999999999999999999999 9999999999999
Q ss_pred ccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhcccccc
Q psy17549 133 DEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKIL 212 (418)
Q Consensus 133 ~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK~~ 212 (418)
+++||||||+++||++||+++.+++.+|+||+.|++||++|++.++++|++++++++. ++.|.+++.+++
T Consensus 82 ~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-----~e~l~~vA~iS~----- 151 (547)
T 1kp8_A 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSD-----SKAIAQVGTISA----- 151 (547)
T ss_dssp HHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCS-----HHHHHHHHHHHT-----
T ss_pred cccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCC-----HHHHHHHHHHhc-----
Confidence 9999999999999999999999999999999999999999999999999999998752 588999998765
Q ss_pred chhhHHHHHHHHHHHHHhhccCCCcceEEEEccCCCcccc-eeeeeEEEeccCCC--------CCcceecCceEEEeecc
Q psy17549 213 SQHKEYFSKLAVDAVLRLKGSGNLSAIQIIKKKGGCLEDS-FLDEGFLLDKKIGQ--------HQPKRIENAKLLIANTP 283 (418)
Q Consensus 213 ~~~~~~ls~lvv~Av~~v~~~~~~~~I~I~ki~Ggs~~dS-~lv~Givl~~~~~~--------~~~~~i~n~kIlll~~~ 283 (418)
+++++|+++++||+.+++++. .|.|. +|+++++| ++++|++|++++.+ .|+++++||||++++++
T Consensus 152 -~~~~~i~~liadAv~~V~~dg---~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~ 225 (547)
T 1kp8_A 152 -NSDETVGKLIAEAMDKVGKEG---VITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKK 225 (547)
T ss_dssp -TSCHHHHHHHHHHHHHHCTTS---EEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESE
T ss_pred -cchhHHHHHHHHHHHHhCcCC---cEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCc
Confidence 367999999999999997543 36665 89999999 99999999999864 26778999999999973
Q ss_pred cccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHc------CceEEe----
Q psy17549 284 MDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADA------GVMAIE---- 353 (418)
Q Consensus 284 Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~------gI~vv~---- 353 (418)
+++++++ ..++++|.+.|++||+++++|++.+++||.++ +|++|+
T Consensus 226 --------------Is~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~ 280 (547)
T 1kp8_A 226 --------------ISNIREM-----------LPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGF 280 (547)
T ss_dssp --------------ECCGGGT-----------HHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSC
T ss_pred --------------CCCHHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEecccc
Confidence 4555564 35678899999999999999999999999985 557777
Q ss_pred -cCCHHHHHHHHHHhCCeeccc-----cCCCCCCCceeeeeEEEEEECceeEEEEee
Q psy17549 354 -HADFDGIERLALVTGGEIVST-----FDNPDQVKLGKCDLIEEVCLWTKNVTGPTV 404 (418)
Q Consensus 354 -~v~~~~L~ria~~tGa~iv~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 404 (418)
++++++|+|||++|||+++++ ++++++++||+|+.|++ ++++|++|++
T Consensus 281 ~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g 334 (547)
T 1kp8_A 281 GDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVI---NKDTTTIIDG 334 (547)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEE---CSSCEEEEEE
T ss_pred ccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEE---ccceEEEEcC
Confidence 888999999999999999996 99999999999999977 5799999975
No 24
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=3e-59 Score=489.21 Aligned_cols=299 Identities=24% Similarity=0.334 Sum_probs=270.7
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccCh----HHHHHHHhhhhccc
Q psy17549 58 EKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNP----AAKILVDMSKVQDD 133 (418)
Q Consensus 58 ~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP----~akll~~~~~~~~~ 133 (418)
.+|.++|.+|+.||..++++++|||||+||+|||+++ +|+++|||||+||+++|+++|| +|||++++|++||+
T Consensus 6 ~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~---~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 82 (543)
T 1we3_A 6 VFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKK---FGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTND 82 (543)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCS---SSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECC---CCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhe
Confidence 5789999999999999999999999999999999999 5999999999999999999999 99999999999999
Q ss_pred cccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhccccccc
Q psy17549 134 EVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKILS 213 (418)
Q Consensus 134 ~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK~~~ 213 (418)
++||||||+++||++||+++.+++.+|+||+.|++||++|++.+++.|++++++++. ++.|.++++++.+
T Consensus 83 e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-----~~~l~~vA~iS~~----- 152 (543)
T 1we3_A 83 VAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVED-----RKAIEEVATISAN----- 152 (543)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCS-----HHHHHHHHHHHHT-----
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC-----HHHHHHhhhhhcC-----
Confidence 999999999999999999999999999999999999999999999999999998752 5889999977642
Q ss_pred hhhHHHHHHHHHHHHHhhccCCCcceEEEEccCCCcccc-eeeeeEEEeccCCC--------CCcceecCceEEEeeccc
Q psy17549 214 QHKEYFSKLAVDAVLRLKGSGNLSAIQIIKKKGGCLEDS-FLDEGFLLDKKIGQ--------HQPKRIENAKLLIANTPM 284 (418)
Q Consensus 214 ~~~~~ls~lvv~Av~~v~~~~~~~~I~I~ki~Ggs~~dS-~lv~Givl~~~~~~--------~~~~~i~n~kIlll~~~L 284 (418)
+++|+++++||+.+++++. .|.|. +|+++++| ++++|++|++++.+ .|+++++||||++++++
T Consensus 153 --~~~i~~li~dAv~~V~~~g---~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~- 224 (543)
T 1we3_A 153 --DPEVGKLIADAMEKVGKEG---IITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK- 224 (543)
T ss_dssp --CHHHHHHHHHHHHTTCTTS---EEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSC-
T ss_pred --CHHHHHHHHHHHHHhCcCC---cEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCC-
Confidence 6899999999999997543 35565 89999999 99999999999864 26778999999999974
Q ss_pred ccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHc------CceEEe-----
Q psy17549 285 DTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADA------GVMAIE----- 353 (418)
Q Consensus 285 e~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~------gI~vv~----- 353 (418)
+++++++ ..+++++.+.|++||+++++|++.+++||..+ +|++|+
T Consensus 225 -------------Is~~~~l-----------~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~ 280 (543)
T 1we3_A 225 -------------VSNVREL-----------LPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFG 280 (543)
T ss_dssp -------------BCCHHHH-----------HHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSH
T ss_pred -------------cCCHHHH-----------HHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchh
Confidence 4455553 35688899999999999999999999999884 668888
Q ss_pred cCCHHHHHHHHHHhCCeeccc-----cCCCCCCCceeeeeEEEEEECceeEEEEee
Q psy17549 354 HADFDGIERLALVTGGEIVST-----FDNPDQVKLGKCDLIEEVCLWTKNVTGPTV 404 (418)
Q Consensus 354 ~v~~~~L~ria~~tGa~iv~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 404 (418)
++++++|+|||++|||+++++ ++++++++||+|+.|++ +.++|++|++
T Consensus 281 ~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g 333 (543)
T 1we3_A 281 DRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI---TKDETTIVGG 333 (543)
T ss_dssp HHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEE---CSSCEEEEEE
T ss_pred hhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEE---EcCEEEEEcC
Confidence 788999999999999999996 89999999999999976 5799999974
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=5.2e-60 Score=494.82 Aligned_cols=301 Identities=21% Similarity=0.316 Sum_probs=243.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccCh----HHHHHHHhhhhcc
Q psy17549 57 EEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNP----AAKILVDMSKVQD 132 (418)
Q Consensus 57 ~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP----~akll~~~~~~~~ 132 (418)
..+|.++|.+|+.||..++++++|||||+||+|||+++ .|+++|||||+||+++|+++|| +|||++++|++||
T Consensus 6 ~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~---~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd 82 (545)
T 1iok_A 6 VKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKS---FGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTN 82 (545)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCS---SSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGG
T ss_pred hhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECC---CCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhc
Confidence 35789999999999999999999999999999999999 5999999999999999999999 9999999999999
Q ss_pred ccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhcccccc
Q psy17549 133 DEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKIL 212 (418)
Q Consensus 133 ~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK~~ 212 (418)
+++||||||+++||++||+++++++.+|+||+.|++||++|++.++++|++++++++. ++.|.+++++++
T Consensus 83 ~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-----~e~l~~va~iS~----- 152 (545)
T 1iok_A 83 DEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVND-----SSEVAQVGTISA----- 152 (545)
T ss_dssp GGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCS-----TTTTTHHHHHTT-----
T ss_pred cccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC-----HHHHHHHHHhhc-----
Confidence 9999999999999999999999999999999999999999999999999999998863 367888997764
Q ss_pred chhhHHHHHHHHHHHHHhhccCCCcceEEEEccCCCcccc-eeeeeEEEeccCCC--------CCcceecCceEEEeecc
Q psy17549 213 SQHKEYFSKLAVDAVLRLKGSGNLSAIQIIKKKGGCLEDS-FLDEGFLLDKKIGQ--------HQPKRIENAKLLIANTP 283 (418)
Q Consensus 213 ~~~~~~ls~lvv~Av~~v~~~~~~~~I~I~ki~Ggs~~dS-~lv~Givl~~~~~~--------~~~~~i~n~kIlll~~~ 283 (418)
+++++|++++++|+.+++++.. |.|. +|+++++| ++++|++|++++.+ .|+++++||||++++++
T Consensus 153 -~~~~~i~~li~dAv~~V~~~g~---I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~ 226 (545)
T 1iok_A 153 -NGESFIGQQIAEAMQRVGNEGV---ITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKK 226 (545)
T ss_dssp -TTCHHHHHHHHHHHHHHCTTSC---CCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSC
T ss_pred -CCchhHHHHHHHHHHHhccCCe---EEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCC
Confidence 3678999999999999976533 4454 89999999 99999999999864 27778999999999986
Q ss_pred cccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHc------CceEEe----
Q psy17549 284 MDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADA------GVMAIE---- 353 (418)
Q Consensus 284 Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~------gI~vv~---- 353 (418)
++ +++++ ..+++++.+.|++||+++++|++.+++||.++ +|++|+
T Consensus 227 I~--------------~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~ 281 (545)
T 1iok_A 227 LS--------------SLQPM-----------VPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGF 281 (545)
T ss_dssp BC--------------CCCC----------------------CCCCEEEESCBC-----------------CEEEECSCC
T ss_pred cC--------------CHHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchh
Confidence 43 33332 24678889999999999999999999999985 557777
Q ss_pred -cCCHHHHHHHHHHhCCeeccc-----cCCCCCCCceeeeeEEEEEECceeEEEEee
Q psy17549 354 -HADFDGIERLALVTGGEIVST-----FDNPDQVKLGKCDLIEEVCLWTKNVTGPTV 404 (418)
Q Consensus 354 -~v~~~~L~ria~~tGa~iv~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 404 (418)
++++++|+|||++|||+++++ ++++++++||+|+.|++ ++++|++|++
T Consensus 282 ~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g 335 (545)
T 1iok_A 282 GDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSI---NKDNTTIVDG 335 (545)
T ss_dssp TTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEE---CSSCEEEESC
T ss_pred hhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEE---ecCEEEEEeC
Confidence 889999999999999999996 99999999999999977 5699999964
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=6.9e-59 Score=485.10 Aligned_cols=302 Identities=24% Similarity=0.333 Sum_probs=207.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhccCcccccccccccccCCCCeEEccCHHHHHHhccccChH----HHHHHHhhhhcc
Q psy17549 57 EEKSEIARMSSFIGAIAIGDLVKSTLGPKGMDKILVSMGRNSGQVEITNDGATILKSVGVDNPA----AKILVDMSKVQD 132 (418)
Q Consensus 57 ~~~~~~~~~~ni~~~~~la~~v~sslGP~G~~Kmi~~~~~~~g~v~iTnDG~tIl~~l~~~hP~----akll~~~~~~~~ 132 (418)
..+|++||.+|+.||+.+|+++++||||+||+|||+++ .|+++|||||+||+++|+++||+ |||++++|++||
T Consensus 5 ~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~---~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd 81 (546)
T 3rtk_A 5 IAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKK---WGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTD 81 (546)
T ss_dssp -----------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC
T ss_pred eeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECC---CCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhh
Confidence 35789999999999999999999999999999999998 59999999999999999999998 999999999999
Q ss_pred ccccCCceehHhHHHHHHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHhhccccCCCchhhHHHHHHHHHhhcccccc
Q psy17549 133 DEVGDGTTSVTVLASELLKNAEKLIDQRLHPQTIIAGWRRATDIARKALREASIDNGLNSEKFREDLLNIARTTLSSKIL 212 (418)
Q Consensus 133 ~~~GDGttt~viLa~~Ll~~a~~li~~Gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~L~~ia~tsl~sK~~ 212 (418)
+++||||||+++||++||++|.+++.+|+||+.|++||++|++.++++|++++++++. ++.|.++|+++.+
T Consensus 82 ~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~-----~e~L~~vA~iS~~---- 152 (546)
T 3rtk_A 82 DVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVET-----KEQIAATAAISAG---- 152 (546)
T ss_dssp -------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCS-----HHHHHHHHHHHHT----
T ss_pred hhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC-----hHHHHhHeEEeCC----
Confidence 9999999999999999999999999999999999999999999999999999998762 5789999987652
Q ss_pred chhhHHHHHHHHHHHHHhhccCCCcceEEEEccCCCcccceeeeeEEEeccCCC--------CCcceecCceEEEeeccc
Q psy17549 213 SQHKEYFSKLAVDAVLRLKGSGNLSAIQIIKKKGGCLEDSFLDEGFLLDKKIGQ--------HQPKRIENAKLLIANTPM 284 (418)
Q Consensus 213 ~~~~~~ls~lvv~Av~~v~~~~~~~~I~I~ki~Ggs~~dS~lv~Givl~~~~~~--------~~~~~i~n~kIlll~~~L 284 (418)
++.+++++++|+.+++++. .|.|.+.. +...+|++++|++|++++.+ .|+++++||||++++++
T Consensus 153 ---~~~i~~liadAv~~V~~dg---vI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~k- 224 (546)
T 3rtk_A 153 ---DQSIGDLIAEAMDKVGNEG---VITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSK- 224 (546)
T ss_dssp ---CHHHHHHHHHHHHHSCTTS---EEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSE-
T ss_pred ---chHHHHHHHHHHHHhccCC---ceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCc-
Confidence 6789999999999997653 36676533 55679999999999999864 47899999999999973
Q ss_pred ccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEeccccccchHHHHHHcC------ceEEec----
Q psy17549 285 DTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINRQLIYNYPEQLFADAG------VMAIEH---- 354 (418)
Q Consensus 285 e~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~g------I~vv~~---- 354 (418)
+++++++. .++++|.+.|++||+++++|++.+++||..++ +.+|+.
T Consensus 225 -------------Is~~~~l~-----------~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~ 280 (546)
T 3rtk_A 225 -------------VSTVKDLL-----------PLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFG 280 (546)
T ss_dssp -------------ECCSTTTH-----------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCH
T ss_pred -------------cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEecccccc
Confidence 55566643 45788999999999999999999999998764 466653
Q ss_pred -CCHHHHHHHHHHhCCeecc-----ccCCCCCCCceeeeeEEEEEECceeEEEEeee
Q psy17549 355 -ADFDGIERLALVTGGEIVS-----TFDNPDQVKLGKCDLIEEVCLWTKNVTGPTVS 405 (418)
Q Consensus 355 -v~~~~L~ria~~tGa~iv~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~ 405 (418)
.++++|+|||++|||++++ +++++++++||+|+.|+ +|+++|++|++|
T Consensus 281 ~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g~ 334 (546)
T 3rtk_A 281 DRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEGA 334 (546)
T ss_dssp HHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEEC
T ss_pred ccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcCC
Confidence 3478899999999999999 68999999999999997 589999999863
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=4e-39 Score=291.35 Aligned_cols=164 Identities=20% Similarity=0.279 Sum_probs=143.2
Q ss_pred cccceeeeeEEEeccCCC-CCcceecCceEEEeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCc
Q psy17549 249 LEDSFLDEGFLLDKKIGQ-HQPKRIENAKLLIANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNA 327 (418)
Q Consensus 249 ~~dS~lv~Givl~~~~~~-~~~~~i~n~kIlll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv 327 (418)
++||++++|++|++++.+ +||++++||||++++++||+++++.+ +++.+++++++.++.++|++++++++++|.+.|+
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~-~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 79 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQ-TDIEITREEDFTRILQMEEEYIHQLCEDIIQLKP 79 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC---------------CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCc-cEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 469999999999999986 59999999999999999999999984 8899999999999999999999999999999999
Q ss_pred eEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHHhCCeeccccCCCCCCCcee-eeeEEEEEECceeEEEEeee-
Q psy17549 328 NVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGK-CDLIEEVCLWTKNVTGPTVS- 405 (418)
Q Consensus 328 ~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa~iv~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~- 405 (418)
|||+|+++|+|.+++||+++||++++|++++||+|||++|||++++++++++++++|+ |+.|+++++|+++|+||++|
T Consensus 80 nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~ 159 (178)
T 1gml_A 80 DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCK 159 (178)
T ss_dssp SEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEES
T ss_pred cEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999 99999999999999999975
Q ss_pred -----eEEEeCCC
Q psy17549 406 -----TYSISGFR 413 (418)
Q Consensus 406 -----t~~l~g~~ 413 (418)
||+|||++
T Consensus 160 ~~~~~TIllRG~~ 172 (178)
T 1gml_A 160 DPKACTILLRGAS 172 (178)
T ss_dssp STTSCEEEEEC--
T ss_pred CCCEEEEEEECCC
Confidence 99999976
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=100.00 E-value=4.2e-36 Score=266.54 Aligned_cols=151 Identities=25% Similarity=0.385 Sum_probs=146.6
Q ss_pred eeeEEEeccCCC-CCcceecCceEEEeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCceEEEec
Q psy17549 255 DEGFLLDKKIGQ-HQPKRIENAKLLIANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNANVFINR 333 (418)
Q Consensus 255 v~Givl~~~~~~-~~~~~i~n~kIlll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~vVl~~ 333 (418)
++|++|++++++ +||++++||||++++++||+++++.+ +++.+++++++..+.++|++++++++++|.+.|+|||+|+
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~-~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~ 79 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIE-AKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQ 79 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHH-HHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEES
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccc-eeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEEC
Confidence 579999999976 69999999999999999999999985 8899999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHcCceEEecCCHHHHHHHHHHhCCeeccccCCCCCCCceeeeeEEEEEECceeEEEEeeee
Q psy17549 334 QLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGEIVSTFDNPDQVKLGKCDLIEEVCLWTKNVTGPTVST 406 (418)
Q Consensus 334 ~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa~iv~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~t 406 (418)
++|+|.+++||+++||++++|+++++|+|||++|||++++++++++++++|+|+.|+++++|+++|++|++|.
T Consensus 80 k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~ 152 (159)
T 1ass_A 80 KGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCK 152 (159)
T ss_dssp SCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC
T ss_pred CccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999995
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=98.75 E-value=6e-08 Score=86.55 Aligned_cols=115 Identities=21% Similarity=0.253 Sum_probs=90.5
Q ss_pred eeeeeEEEeccCCC--------CCcceecCceEEEeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHc
Q psy17549 253 FLDEGFLLDKKIGQ--------HQPKRIENAKLLIANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILK 324 (418)
Q Consensus 253 ~lv~Givl~~~~~~--------~~~~~i~n~kIlll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~ 324 (418)
.+++||-|+++|.+ .|...++||.|++.+. +|++..++.++. +.+.+
T Consensus 3 evvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdk--------------KIs~i~~ilP~L-----------E~~~~ 57 (194)
T 3m6c_A 3 EFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQD--------------KISSLPDLLPLL-----------EKVAG 57 (194)
T ss_dssp CCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSS--------------EECCHHHHHHHH-----------HHHHH
T ss_pred EEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcC--------------ccCCHHHHHHHH-----------HHHHH
Confidence 57899999999842 3667899999999984 588888987764 34445
Q ss_pred cCceEEEeccccccchHHHHHHc------CceEEecCC-----HHHHHHHHHHhCCeeccc-----cCCCCCCCceeeee
Q psy17549 325 HNANVFINRQLIYNYPEQLFADA------GVMAIEHAD-----FDGIERLALVTGGEIVST-----FDNPDQVKLGKCDL 388 (418)
Q Consensus 325 ~gv~vVl~~~~I~d~a~~~l~~~------gI~vv~~v~-----~~~L~ria~~tGa~iv~~-----l~~l~~~~lG~~~~ 388 (418)
.+-.+++....|+..|+..|.-| ++.+|+-.. +..|++||.+|||++++. +++.+.++||+|++
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~ 137 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARR 137 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccE
Confidence 56678888889999988766332 456777665 467999999999999983 67888899999998
Q ss_pred EEEE
Q psy17549 389 IEEV 392 (418)
Q Consensus 389 v~~~ 392 (418)
|.+.
T Consensus 138 v~vt 141 (194)
T 3m6c_A 138 VVVS 141 (194)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8765
No 30
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=98.73 E-value=1.1e-07 Score=81.14 Aligned_cols=111 Identities=19% Similarity=0.310 Sum_probs=86.9
Q ss_pred eEEEeccCCC--------CCcceecCceEEEeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccCce
Q psy17549 257 GFLLDKKIGQ--------HQPKRIENAKLLIANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHNAN 328 (418)
Q Consensus 257 Givl~~~~~~--------~~~~~i~n~kIlll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~gv~ 328 (418)
|+-|++++.+ .|...++||.|++.+. ++++.+++.++. +++.+.|-.
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdk--------------KIs~i~~llP~L-----------E~v~~~~~p 55 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEK--------------KVSNVRELLPIL-----------EQVAQTGKP 55 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESS--------------EECCHHHHHHHH-----------HHHHTTTCC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecc--------------cccCHHHHHHHH-----------HHHHHHCCC
Confidence 6778887742 3667899999999984 588888887763 456677777
Q ss_pred EEEeccccccchHHHHHHc------CceEEecCC-----HHHHHHHHHHhCCeeccc-----cCCCCCCCceeeeeEEEE
Q psy17549 329 VFINRQLIYNYPEQLFADA------GVMAIEHAD-----FDGIERLALVTGGEIVST-----FDNPDQVKLGKCDLIEEV 392 (418)
Q Consensus 329 vVl~~~~I~d~a~~~l~~~------gI~vv~~v~-----~~~L~ria~~tGa~iv~~-----l~~l~~~~lG~~~~v~~~ 392 (418)
+++....|+..++..|.-| ++.+|+-.. +..|++||.+||+++++. +++.+.++||+|++|.+.
T Consensus 56 LlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vt 135 (145)
T 1srv_A 56 LLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRIT 135 (145)
T ss_dssp EEEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEEC
T ss_pred EEEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEc
Confidence 9999999999999876433 456777654 567999999999999974 667788899999988765
No 31
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=98.67 E-value=2.2e-07 Score=83.11 Aligned_cols=113 Identities=14% Similarity=0.236 Sum_probs=89.0
Q ss_pred eeeEEEeccCCC--------CCcceecCceEEEeecccccccccccCeeEEEcCHHHHHHHHHHHHHHHHHHHHHHHccC
Q psy17549 255 DEGFLLDKKIGQ--------HQPKRIENAKLLIANTPMDTDKIKVFGSRVRVDSMAKIAELELAEKEKMKDKVEKILKHN 326 (418)
Q Consensus 255 v~Givl~~~~~~--------~~~~~i~n~kIlll~~~Le~~k~e~~~~~v~i~s~~~l~~~~~~E~~~l~~~v~~I~~~g 326 (418)
.+|+-||++|.. .|...++||.||+.+. +|++..++.++. +.+.+.+
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdk--------------KIs~i~~ilP~L-----------E~v~~~~ 66 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDK--------------KISNIRELLPVL-----------EGVAKAS 66 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEE--------------EECCHHHHHHHH-----------HHHHTSS
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcC--------------ccCCHHHHHHHH-----------HHHHHhC
Confidence 368889988742 3667899999999984 578888887763 4566777
Q ss_pred ceEEEeccccccchHHHHHHc------CceEEecCC-----HHHHHHHHHHhCCeeccc-----cCCCCCCCceeeeeEE
Q psy17549 327 ANVFINRQLIYNYPEQLFADA------GVMAIEHAD-----FDGIERLALVTGGEIVST-----FDNPDQVKLGKCDLIE 390 (418)
Q Consensus 327 v~vVl~~~~I~d~a~~~l~~~------gI~vv~~v~-----~~~L~ria~~tGa~iv~~-----l~~l~~~~lG~~~~v~ 390 (418)
-.+++....|+..|+..|.-+ ++.+|+-.. +..|++||.+|||++++. +++.+.++||+|++|.
T Consensus 67 rpLlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~ 146 (201)
T 3osx_A 67 KPLVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVV 146 (201)
T ss_dssp CCEEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEE
T ss_pred CCeEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEE
Confidence 778888889999988766332 466777665 456999999999999984 6788889999999887
Q ss_pred EE
Q psy17549 391 EV 392 (418)
Q Consensus 391 ~~ 392 (418)
+.
T Consensus 147 vt 148 (201)
T 3osx_A 147 IN 148 (201)
T ss_dssp EC
T ss_pred Ec
Confidence 65
No 32
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=70.86 E-value=9 Score=30.95 Aligned_cols=52 Identities=15% Similarity=0.142 Sum_probs=39.5
Q ss_pred HHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHHhCCe
Q psy17549 318 KVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGE 370 (418)
Q Consensus 318 ~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa~ 370 (418)
.++.|.+.||++|+|. +|.+-+...|.++||-++......--+.|.....++
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 4566778899999999 589999999999999999876544334455444444
No 33
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=68.22 E-value=7.4 Score=32.31 Aligned_cols=53 Identities=21% Similarity=0.109 Sum_probs=40.3
Q ss_pred HHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHHhCCe
Q psy17549 317 DKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGE 370 (418)
Q Consensus 317 ~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa~ 370 (418)
..++.|.+.+|++|+|. +|.+-+...|.++||-++......--+.|.....++
T Consensus 67 ~~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp CHHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 35566778899999998 689999999999999999876644344455444444
No 34
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=67.98 E-value=12 Score=29.68 Aligned_cols=52 Identities=13% Similarity=0.132 Sum_probs=39.4
Q ss_pred HHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHHhCCe
Q psy17549 318 KVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGE 370 (418)
Q Consensus 318 ~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa~ 370 (418)
..+.|.+.|+++|+|. ++.+-+...|.++||-++......--+.+.....++
T Consensus 54 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 4556778899999999 589999999999999999876544344455544444
No 35
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=66.02 E-value=9.3 Score=30.71 Aligned_cols=53 Identities=17% Similarity=0.164 Sum_probs=40.2
Q ss_pred HHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHHhCCe
Q psy17549 317 DKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGE 370 (418)
Q Consensus 317 ~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa~ 370 (418)
...+.|.+.++++|++. +|.+-+...|.++||-++......--+.|.....++
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 45666778999999999 689999999999999999875544334444444444
No 36
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=63.39 E-value=11 Score=30.27 Aligned_cols=52 Identities=13% Similarity=0.117 Sum_probs=38.8
Q ss_pred HHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCH-HHHHHHHHHhCC
Q psy17549 317 DKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADF-DGIERLALVTGG 369 (418)
Q Consensus 317 ~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~-~~L~ria~~tGa 369 (418)
...+.|.+.||++|+|. ++.+-+...|.++||-++..... .--+.+.....+
T Consensus 58 ~~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 58 NAAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 34566777999999999 69999999999999999987655 333444444433
No 37
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=52.14 E-value=19 Score=29.74 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=37.6
Q ss_pred HHHHHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHHhCCe
Q psy17549 317 DKVEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGGE 370 (418)
Q Consensus 317 ~~v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa~ 370 (418)
...+.|.+.||++|||. +|.+-+...|.+ ||-++......--+.+.....++
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 34566677899999998 689999999999 99999876533333444444443
No 38
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=37.03 E-value=45 Score=25.74 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=35.5
Q ss_pred HHHHccCceEEEeccccccchHHHHHHcCceEEecCCHHHHHHHHHHhCC
Q psy17549 320 EKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHADFDGIERLALVTGG 369 (418)
Q Consensus 320 ~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa 369 (418)
+.+.+.|+++|+|. ++++-+...|.++ |-++......--+.+.....+
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g 97 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEG 97 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcC
Confidence 45566899999997 6899999999999 999986554433444444433
No 39
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=31.27 E-value=1.1e+02 Score=22.72 Aligned_cols=50 Identities=10% Similarity=0.062 Sum_probs=35.7
Q ss_pred HHHHHHHccCceEEEeccccccch----HHHHHHcCceEEecCCHHHHHHHHHHhCC
Q psy17549 317 DKVEKILKHNANVFINRQLIYNYP----EQLFADAGVMAIEHADFDGIERLALVTGG 369 (418)
Q Consensus 317 ~~v~~I~~~gv~vVl~~~~I~d~a----~~~l~~~gI~vv~~v~~~~L~ria~~tGa 369 (418)
+..+.|.+-.+.+|+...+.++.. ..++.++||.++..-++.+| .+++|-
T Consensus 18 ~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~eL---G~a~Gk 71 (82)
T 3v7e_A 18 QTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKL---GKACGI 71 (82)
T ss_dssp HHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHHH---HHHHTC
T ss_pred HHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHHH---HHHhCC
Confidence 445666667789999999988843 34678899998887766654 455554
No 40
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=23.92 E-value=1.1e+02 Score=20.99 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=25.5
Q ss_pred HHHHHHHHcCCChhhHHHHHHHHH---HHHHHHHHhhc
Q psy17549 151 KNAEKLIDQRLHPQTIIAGWRRAT---DIARKALREAS 185 (418)
Q Consensus 151 ~~a~~li~~Gi~p~~Ii~g~~~a~---~~~~~~L~~~s 185 (418)
.+..+|+..|+++..++++++.+- +.|...|.++.
T Consensus 13 ~~Ia~Lm~mGFsr~~ai~AL~~a~nnve~AaniLlef~ 50 (52)
T 2ooa_A 13 AKIAKLMGEGYAFEEVKRALEIAQNNVEVARSILREFA 50 (52)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHTTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHHhc
Confidence 456778999999999999988774 34455555543
No 41
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=23.44 E-value=1.6e+02 Score=23.77 Aligned_cols=50 Identities=12% Similarity=0.017 Sum_probs=35.8
Q ss_pred HHHHHHHccCceEEEecccccc-----chHHHHHHcCceEEecCCHHHHHHHHHHhCC
Q psy17549 317 DKVEKILKHNANVFINRQLIYN-----YPEQLFADAGVMAIEHADFDGIERLALVTGG 369 (418)
Q Consensus 317 ~~v~~I~~~gv~vVl~~~~I~d-----~a~~~l~~~gI~vv~~v~~~~L~ria~~tGa 369 (418)
...+.|.+-.+.+|+.....+| ....++.+++|.++..-++. +|.+++|-
T Consensus 31 ~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~---~LG~a~G~ 85 (126)
T 2xzm_U 31 EVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRA---SLGEYLGH 85 (126)
T ss_dssp HHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSH---HHHHHHTC
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHH---HHHHHHCC
Confidence 4456666677899999999975 34567899999988655555 55566663
No 42
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=23.19 E-value=2.2e+02 Score=22.64 Aligned_cols=50 Identities=16% Similarity=0.084 Sum_probs=37.1
Q ss_pred HHHHHHHHccCceEEEeccccccc-----hHHHHHHcCceEEecCCHHHHHHHHHHhC
Q psy17549 316 KDKVEKILKHNANVFINRQLIYNY-----PEQLFADAGVMAIEHADFDGIERLALVTG 368 (418)
Q Consensus 316 ~~~v~~I~~~gv~vVl~~~~I~d~-----a~~~l~~~gI~vv~~v~~~~L~ria~~tG 368 (418)
....+.|.+-.+.+|+...++++. ...+|.++||.++..-++.+|-+ ++|
T Consensus 26 ~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG~---a~g 80 (121)
T 2lbw_A 26 KEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQDLGA---AGA 80 (121)
T ss_dssp HHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHHH---HHT
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHHH---HhC
Confidence 345666777778999999999884 33578899999887777765554 566
No 43
>2nx6_A Nematocyst outer WALL antigen; disulfide rich, turns, structural protein; NMR {Hydra vulgaris}
Probab=22.66 E-value=35 Score=19.36 Aligned_cols=13 Identities=23% Similarity=0.496 Sum_probs=9.3
Q ss_pred CCccccCCCCCCc
Q psy17549 15 GGQILPTIPTKPT 27 (418)
Q Consensus 15 ~~~~~~~~~~~~~ 27 (418)
|+.-||..|++|.
T Consensus 1 gssscpqfpscsp 13 (27)
T 2nx6_A 1 GSSSCPQFPSCSP 13 (27)
T ss_dssp CCCSSTTCTTCCG
T ss_pred CCCcCCCCCCCCC
Confidence 4567888888764
No 44
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=22.18 E-value=98 Score=28.68 Aligned_cols=52 Identities=17% Similarity=0.163 Sum_probs=37.1
Q ss_pred HHHHHccCceEEEeccccccchHHHHHHcCceEEecCC--------------------------HHHHHHHHHHhCCe
Q psy17549 319 VEKILKHNANVFINRQLIYNYPEQLFADAGVMAIEHAD--------------------------FDGIERLALVTGGE 370 (418)
Q Consensus 319 v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~~v~--------------------------~~~L~ria~~tGa~ 370 (418)
+++|.+.++++|+.....++...+-|.+.||-++-.-. .+.++.+++++|..
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 35677889999998755455566778888887665211 25688999999965
No 45
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=21.34 E-value=1.7e+02 Score=23.86 Aligned_cols=52 Identities=12% Similarity=-0.026 Sum_probs=38.2
Q ss_pred HHHHHHHHHccCceEEEeccccccc-----hHHHHHHcCceEEecCCHHHHHHHHHHhCC
Q psy17549 315 MKDKVEKILKHNANVFINRQLIYNY-----PEQLFADAGVMAIEHADFDGIERLALVTGG 369 (418)
Q Consensus 315 l~~~v~~I~~~gv~vVl~~~~I~d~-----a~~~l~~~gI~vv~~v~~~~L~ria~~tGa 369 (418)
.....+.|.+-.+.+|+...++++. ...+|.++||.++..-++. +|.+++|-
T Consensus 37 ~~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~---eLG~a~G~ 93 (134)
T 2ale_A 37 ANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRV---ALGRACGV 93 (134)
T ss_dssp HHHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHH---HHHHHTTC
T ss_pred chHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHH---HHHHHhCC
Confidence 4456677777788999999998884 4467889999987765655 55566664
No 46
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=21.32 E-value=1.6e+02 Score=26.69 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=37.4
Q ss_pred HHHHHccCceEEEecccc-ccchHHHHHHcCceEEec---CC----HHHHHHHHHHhCCe
Q psy17549 319 VEKILKHNANVFINRQLI-YNYPEQLFADAGVMAIEH---AD----FDGIERLALVTGGE 370 (418)
Q Consensus 319 v~~I~~~gv~vVl~~~~I-~d~a~~~l~~~gI~vv~~---v~----~~~L~ria~~tGa~ 370 (418)
++.|.+.++++|+..... ++...+.|.+.||.++-. -+ .+.++.+++++|..
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (283)
T 2r79_A 52 AEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVP 111 (283)
T ss_dssp HHHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCCH
Confidence 355889999999987643 345667888999876643 12 35688899999864
No 47
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=20.37 E-value=1.1e+02 Score=27.20 Aligned_cols=52 Identities=12% Similarity=0.091 Sum_probs=35.2
Q ss_pred HHHHHccCceEEEeccccccchHHHHHHcCceEEe--cCC----HHHHHHHHHHhCCe
Q psy17549 319 VEKILKHNANVFINRQLIYNYPEQLFADAGVMAIE--HAD----FDGIERLALVTGGE 370 (418)
Q Consensus 319 v~~I~~~gv~vVl~~~~I~d~a~~~l~~~gI~vv~--~v~----~~~L~ria~~tGa~ 370 (418)
++.|.+.++++|+.....++...+.|.+.||-++- .-+ .+.++.+++++|..
T Consensus 53 ~E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~~ 110 (260)
T 2q8p_A 53 VEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRK 110 (260)
T ss_dssp HHHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCCh
Confidence 35577889999998765555566778888875443 222 24578888888864
Done!