BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17558
(317 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58872|RHBL3_HUMAN Rhomboid-related protein 3 OS=Homo sapiens GN=RHBDL3 PE=2 SV=1
Length = 404
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
Query: 168 YEDEYTCIPPPVIMIFISAVEIGFFLYDAMIVGD-TYSLRGP--MAKTLIYNPFHRAEVW 224
Y D YTC PPP MI ++ +E+ FFLY+ + +G + P + +L+Y+P RA+VW
Sbjct: 153 YYDSYTCCPPPWFMITVTLLEVAFFLYNGVSLGQFVLQVTHPRYLKNSLVYHPQLRAQVW 212
Query: 225 RFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHV 284
R++TY+ +H G HL +N+++Q+L+G+PLEMVH R+ ++Y+ GV+AGSLA S+ D
Sbjct: 213 RYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSVADMTA 272
Query: 285 FLAGASGGVYALIAAHVATIIMVRSLLKQQWDF 317
+ G+SGGVYAL++AH+A I+M S +K Q+
Sbjct: 273 PVVGSSGGVYALVSAHLANIVMNWSGMKCQFKL 305
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 50 YEDEYTCIPPPVIMIFISAVEIGFFLYDAMIVGD-TYSLRGP--MAKTLIYNPFHRAEVW 106
Y D YTC PPP MI ++ +E+ FFLY+ + +G + P + +L+Y+P RA+VW
Sbjct: 153 YYDSYTCCPPPWFMITVTLLEVAFFLYNGVSLGQFVLQVTHPRYLKNSLVYHPQLRAQVW 212
Query: 107 RFMTYMLVHVGI 118
R++TY+ +H GI
Sbjct: 213 RYLTYIFMHAGI 224
>sp|P34356|ROM2_CAEEL Rhomboid-related protein 2 OS=Caenorhabditis elegans GN=rom-2 PE=3
SV=2
Length = 435
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 122/199 (61%), Gaps = 15/199 (7%)
Query: 112 MLVHVGIWENAAQDEADVV-VIRKPKWNRLNSYVRK---TVVPRHRIQPQVRHKVEPDGI 167
M +++ + E D AD ++ K K RL Y+ + TV P+++ + V +++
Sbjct: 60 MSLYLEMREGKPVDFADFCYLMSKCKGYRLREYLFRAALTVTPKNQ-RIHVFSELQ---- 114
Query: 168 YEDEYTCIPPPVIMIFISAVEIGFFLYDAMIVGDTYSLRGPM--AKTLIYNPFHRAEVWR 225
Y C+PPP+ +IF+S V++ F+LY + + L GP+ LI + +H E+WR
Sbjct: 115 ---RYKCVPPPIFLIFLSIVQLAFYLYYVVDSSEGVWLSGPIPTMSPLIVSQYHLPELWR 171
Query: 226 FMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVF 285
TY L++VG FH++ N+L+Q+ +G+PLE+VHR WR+ I+Y +GVL GS+ + DP VF
Sbjct: 172 LFTYCLINVGIFHIIFNILIQLAIGVPLELVHR-WRIYILYFMGVLFGSILSLALDPTVF 230
Query: 286 LAGASGGVYALIAAHVATI 304
L G + G ++LIA+H+ TI
Sbjct: 231 LCGGAAGSFSLIASHITTI 249
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 14/119 (11%)
Query: 7 DEADVV-VIRKPKWNRLNSYVRK---TVVPRHRIQPQVRHKVEPDGIYEDEYTCIPPPVI 62
D AD ++ K K RL Y+ + TV P+++ + V +++ Y C+PPP+
Sbjct: 73 DFADFCYLMSKCKGYRLREYLFRAALTVTPKNQ-RIHVFSELQ-------RYKCVPPPIF 124
Query: 63 MIFISAVEIGFFLYDAMIVGDTYSLRGPM--AKTLIYNPFHRAEVWRFMTYMLVHVGIW 119
+IF+S V++ F+LY + + L GP+ LI + +H E+WR TY L++VGI+
Sbjct: 125 LIFLSIVQLAFYLYYVVDSSEGVWLSGPIPTMSPLIVSQYHLPELWRLFTYCLINVGIF 183
>sp|Q9NX52|RHBL2_HUMAN Rhomboid-related protein 2 OS=Homo sapiens GN=RHBDL2 PE=1 SV=2
Length = 303
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 99/161 (61%), Gaps = 11/161 (6%)
Query: 152 HRIQPQVRHKVEPDGIYEDEYTCIPPPVIMIFISAVEIGFFLYDAM-------IVGDTYS 204
HRI + + G Y + C PPPV +I IS E+ F+Y A+ I DT
Sbjct: 46 HRIVSKWMLPEKSRGTYLERANCFPPPVFIISISLAELAVFIYYAVWKPQKQWITLDTGI 105
Query: 205 LRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLI 264
L P IY+P R E WRF++YMLVH G H++ NL +Q++LGIPLEMVH+ RV +
Sbjct: 106 LESP----FIYSPEKREEAWRFISYMLVHAGVQHILGNLCMQLVLGIPLEMVHKGLRVGL 161
Query: 265 IYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATII 305
+YL GV+AGSLA+SI DP +L GASGGVYAL+ + ++
Sbjct: 162 VYLAGVIAGSLASSIFDPLRYLVGASGGVYALMGGYFMNVL 202
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 34 HRIQPQVRHKVEPDGIYEDEYTCIPPPVIMIFISAVEIGFFLYDAM-------IVGDTYS 86
HRI + + G Y + C PPPV +I IS E+ F+Y A+ I DT
Sbjct: 46 HRIVSKWMLPEKSRGTYLERANCFPPPVFIISISLAELAVFIYYAVWKPQKQWITLDTGI 105
Query: 87 LRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGI 118
L P IY+P R E WRF++YMLVH G+
Sbjct: 106 LESP----FIYSPEKREEAWRFISYMLVHAGV 133
>sp|A2AGA4|RHBL2_MOUSE Rhomboid-related protein 2 OS=Mus musculus GN=Rhbdl2 PE=1 SV=1
Length = 302
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 93/145 (64%), Gaps = 11/145 (7%)
Query: 168 YEDEYTCIPPPVIMIFISAVEIGFFLYDAM-------IVGDTYSLRGPMAKTLIYNPFHR 220
Y + C+PPP+ +I IS E+ F+Y A+ I DT L P L Y P R
Sbjct: 61 YLERANCLPPPLFIILISLAELAVFIYYAVWKPQKQWITLDTGILESP----LTYCPEKR 116
Query: 221 AEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSIT 280
E WRF++YMLVH G H+V NLL+QI+LGIPLEMVH+ RV ++YL GVLAGSLA+SI
Sbjct: 117 EEAWRFISYMLVHAGVQHIVGNLLMQIVLGIPLEMVHKGLRVGLVYLAGVLAGSLASSIF 176
Query: 281 DPHVFLAGASGGVYALIAAHVATII 305
DP L GASGGVYAL+ + +I
Sbjct: 177 DPLKSLVGASGGVYALMGGYFMNVI 201
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 11/76 (14%)
Query: 50 YEDEYTCIPPPVIMIFISAVEIGFFLYDAM-------IVGDTYSLRGPMAKTLIYNPFHR 102
Y + C+PPP+ +I IS E+ F+Y A+ I DT L P L Y P R
Sbjct: 61 YLERANCLPPPLFIILISLAELAVFIYYAVWKPQKQWITLDTGILESP----LTYCPEKR 116
Query: 103 AEVWRFMTYMLVHVGI 118
E WRF++YMLVH G+
Sbjct: 117 EEAWRFISYMLVHAGV 132
>sp|P58873|RHBL3_MOUSE Rhomboid-related protein 3 OS=Mus musculus GN=Rhbdl3 PE=2 SV=1
Length = 404
Score = 131 bits (330), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 104/154 (67%), Gaps = 5/154 (3%)
Query: 168 YEDEYTCIPPPVIMIFISAVEIGFFLYDAMIVGDTYSLRGP----MAKTLIYNPFHRAEV 223
Y D YTC PPP MI I+ +E+ FLY+ +++ D + L+ + +L+Y+P RA+
Sbjct: 153 YYDSYTCCPPPWFMITITLLEVALFLYNGVLL-DQFVLQVTHPRYLKNSLVYHPQLRAQA 211
Query: 224 WRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPH 283
WR++TY+ +H G L +N+ +Q+L+G+PLEMVH R+ ++Y+ GV+AGSLA S+ D
Sbjct: 212 WRYVTYIFMHAGVEQLGLNVALQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSVADMT 271
Query: 284 VFLAGASGGVYALIAAHVATIIMVRSLLKQQWDF 317
+ G+SGGVYAL++AH+A I+M S +K Q+
Sbjct: 272 APVVGSSGGVYALVSAHLANIVMNWSGMKCQFKL 305
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 50 YEDEYTCIPPPVIMIFISAVEIGFFLYDAMIVGDTYSLRGP----MAKTLIYNPFHRAEV 105
Y D YTC PPP MI I+ +E+ FLY+ +++ D + L+ + +L+Y+P RA+
Sbjct: 153 YYDSYTCCPPPWFMITITLLEVALFLYNGVLL-DQFVLQVTHPRYLKNSLVYHPQLRAQA 211
Query: 106 WRFMTYMLVHVGI 118
WR++TY+ +H G+
Sbjct: 212 WRYVTYIFMHAGV 224
>sp|P20350|RHOM_DROME Protein rhomboid OS=Drosophila melanogaster GN=rho PE=1 SV=2
Length = 355
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 87/139 (62%), Gaps = 3/139 (2%)
Query: 178 PVIMIFISAVEIGFFLYDAMIV-GDTYSLRGPM--AKTLIYNPFHRAEVWRFMTYMLVHV 234
P ++ IS +EI F YD + + L P+ L+Y P R +VWRF +YM +H
Sbjct: 102 PWFILVISIIEIAIFAYDRYTMPAQNFGLPVPIPSDSVLVYRPDRRLQVWRFFSYMFLHA 161
Query: 235 GGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVY 294
FHL N+++Q+ GIPLE++H R+ +IY+ GV AGSL TS+ D VFL GASGGVY
Sbjct: 162 NWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVDSEVFLVGASGGVY 221
Query: 295 ALIAAHVATIIMVRSLLKQ 313
AL+AAH+A I + + +K
Sbjct: 222 ALLAAHLANITLNYAHMKS 240
Score = 38.1 bits (87), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 60 PVIMIFISAVEIGFFLYDAMIV-GDTYSLRGPM--AKTLIYNPFHRAEVWRFMTYMLVH 115
P ++ IS +EI F YD + + L P+ L+Y P R +VWRF +YM +H
Sbjct: 102 PWFILVISIIEIAIFAYDRYTMPAQNFGLPVPIPSDSVLVYRPDRRLQVWRFFSYMFLH 160
>sp|O75783|RHBL1_HUMAN Rhomboid-related protein 1 OS=Homo sapiens GN=RHBDL1 PE=2 SV=1
Length = 438
Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 85/135 (62%), Gaps = 3/135 (2%)
Query: 175 IPPPVIMIFISAVEIGFFL-YDAMIVGDTYSLRGP--MAKTLIYNPFHRAEVWRFMTYML 231
PPPV M ++ +I FL Y A + P M L+Y+P HRA WRF+TYM
Sbjct: 194 CPPPVFMASVTLAQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLTYMF 253
Query: 232 VHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASG 291
+HVG L N L+Q+++G+PLEMVH R+ ++YL GVLAGSL SITD + G SG
Sbjct: 254 MHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYLAGVLAGSLTVSITDMRAPVVGGSG 313
Query: 292 GVYALIAAHVATIIM 306
GVYAL +AH+A ++M
Sbjct: 314 GVYALCSAHLANVVM 328
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 57 IPPPVIMIFISAVEIGFFL-YDAMIVGDTYSLRGP--MAKTLIYNPFHRAEVWRFMTYML 113
PPPV M ++ +I FL Y A + P M L+Y+P HRA WRF+TYM
Sbjct: 194 CPPPVFMASVTLAQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLTYMF 253
Query: 114 VHVGI 118
+HVG+
Sbjct: 254 MHVGL 258
>sp|Q8VC82|RHBL1_MOUSE Rhomboid-related protein 1 OS=Mus musculus GN=Rhbdl1 PE=2 SV=1
Length = 373
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 87/137 (63%), Gaps = 4/137 (2%)
Query: 173 TCIPPPVIMIFISAVEIGFFL-YDAMIVGDTYSLRGP--MAKTLIYNPFHRAEVWRFMTY 229
TC PPPV M ++ +I FL Y A + P M L+Y+P HRA WRF+TY
Sbjct: 128 TC-PPPVFMASVTLAQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLTY 186
Query: 230 MLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGA 289
M +HVG L N L+Q+++G+PLEMVH R+ ++YL GVLAGSL SITD + G
Sbjct: 187 MFMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITDMRAPVVGG 246
Query: 290 SGGVYALIAAHVATIIM 306
SGGVYAL +AH+A ++M
Sbjct: 247 SGGVYALCSAHLANVVM 263
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 55 TCIPPPVIMIFISAVEIGFFL-YDAMIVGDTYSLRGP--MAKTLIYNPFHRAEVWRFMTY 111
TC PPPV M ++ +I FL Y A + P M L+Y+P HRA WRF+TY
Sbjct: 128 TC-PPPVFMASVTLAQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLTY 186
Query: 112 MLVHVGI 118
M +HVG+
Sbjct: 187 MFMHVGL 193
>sp|Q19821|ROM1_CAEEL Rhomboid-related protein 1 OS=Caenorhabditis elegans GN=rom-1 PE=3
SV=2
Length = 356
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 87/153 (56%), Gaps = 18/153 (11%)
Query: 168 YEDEYTCIPPPVIMIFISAVEIGFFLY--------------DAMIVGDTYSLRGPMAKTL 213
Y D Y+ PPP+ M+ I+ +++G F + V ++ G
Sbjct: 101 YIDSYSWCPPPIFMLLITIIQVGIFFFYWESDGGRSIWTDCAGCFVHHNHTAPG----IF 156
Query: 214 IYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAG 273
I+ P R E WRF +YM +H G HL+ N+++Q+L+GIPLE+ H+ WR+ IYL+ V +G
Sbjct: 157 IFAPKLRGEAWRFTSYMFLHAGLNHLLGNVIIQLLVGIPLEVAHKIWRIGPIYLLAVTSG 216
Query: 274 SLATSITDPHVFLAGASGGVYALIAAHVATIIM 306
SL DP+ L GAS GVYALI AHVA +I+
Sbjct: 217 SLLQYAIDPNSLLVGASAGVYALIFAHVANVIL 249
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 50 YEDEYTCIPPPVIMIFISAVEIGFFLY------------DAMIVGDTYSLRGPMAKTLIY 97
Y D Y+ PPP+ M+ I+ +++G F + D ++ P I+
Sbjct: 101 YIDSYSWCPPPIFMLLITIIQVGIFFFYWESDGGRSIWTDCAGCFVHHNHTAP--GIFIF 158
Query: 98 NPFHRAEVWRFMTYMLVHVGI 118
P R E WRF +YM +H G+
Sbjct: 159 APKLRGEAWRFTSYMFLHAGL 179
>sp|O88779|RHBL1_RAT Rhomboid-related protein 1 (Fragment) OS=Rattus norvegicus
GN=Rhbdl1 PE=2 SV=1
Length = 164
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%)
Query: 232 VHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASG 291
+HVG L N L+Q+++G+PLEMVH R+ ++YL GVLAGSL SITD + G SG
Sbjct: 2 MHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITDMRAPVVGGSG 61
Query: 292 GVYALIAAHVATIIM 306
GVYAL +AH+A ++M
Sbjct: 62 GVYALCSAHLANVVM 76
>sp|Q695T9|RHBL2_TOXGO Rhomboid-like protease 2 OS=Toxoplasma gondii GN=ROM2 PE=2 SV=1
Length = 283
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 221 AEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYL-VGVLAGSLATSI 279
E+WR + + +H+ FH+++NL VQI +G+ +E + W +L +Y VGVLA ++ ++
Sbjct: 108 GEIWRLICPLFLHLNLFHILMNLWVQIRIGLTMEEKYGWKMLLAVYFGVGVLANMISAAV 167
Query: 280 TDPHVFLAGASGGVYALIAAHVATIIMV 307
AGAS V+ALI +A + ++
Sbjct: 168 LFCGQMKAGASTAVFALIGVQLAELALI 195
>sp|Q6GMF8|RHDF1_DANRE Inactive rhomboid protein 1 OS=Danio rerio GN=rhbdf1 PE=2 SV=1
Length = 857
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + + NP + +R + +H G H +V++ Q+ +
Sbjct: 622 GYFHEEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSVCFQMTI 681
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ IIY++ + G+LA++I P+ G +G + ++A +I
Sbjct: 682 LRDLEKLAGWLRISIIYILSGITGNLASAIFLPYRAEVGPAGSQFGILACLFVELIQSWQ 741
Query: 310 LLKQQW 315
+L Q W
Sbjct: 742 ILAQPW 747
>sp|A0JPA1|RHDF2_XENTR Inactive rhomboid protein 2 OS=Xenopus tropicalis GN=rhbdf2 PE=2
SV=1
Length = 826
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 59/126 (46%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + L NP + + +R + +H G H V+++ Q+ +
Sbjct: 591 GYFHEEATLCSQVHCLDEVCGLLPFLNPEYPDQFYRLWLSLFLHAGVIHCCVSVVFQMTV 650
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ IIY++ + G+LA+++ P+ G +G + L+A +
Sbjct: 651 LRDLEKLAGWLRISIIYILSGITGNLASALFLPYRAEVGPAGSQFGLLACLFVELFQSWQ 710
Query: 310 LLKQQW 315
+L + W
Sbjct: 711 ILAKPW 716
>sp|Q80WQ6|RHDF2_MOUSE Inactive rhomboid protein 2 OS=Mus musculus GN=Rhbdf2 PE=1 SV=1
Length = 827
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F DA + + L NP + +R + +H G H +V+++ Q+ +
Sbjct: 592 GYFHEDATLCSQVHCLDKVCGLLPFLNPEVPDQFYRIWLSLFLHAGIVHCLVSVVFQMTI 651
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ II+++ + G+LA++I P+ G +G + L+A +
Sbjct: 652 LRDLEKLAGWHRISIIFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWQ 711
Query: 310 LLKQQW 315
LL++ W
Sbjct: 712 LLERPW 717
>sp|Q00M95|RHDF2_CANFA Inactive rhomboid protein 2 OS=Canis familiaris GN=RHBDF2 PE=2 SV=1
Length = 827
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + L NP + +R + +H G H +V+++ Q+ +
Sbjct: 592 GYFHEEATLCSQVHCLDKVCGLLPFLNPEVPDQFYRLWLSLFLHAGVVHCLVSVVFQMTI 651
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ II+++ + G+LA++I P+ G +G + L+A +
Sbjct: 652 LRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWQ 711
Query: 310 LLKQQW 315
LL++ W
Sbjct: 712 LLERPW 717
>sp|Q695T8|RHBL4_TOXGO Rhomboid-like protease 4 OS=Toxoplasma gondii GN=ROM4 PE=2 SV=1
Length = 641
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 221 AEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSIT 280
+E +R T M +H G H+++NL QI + +E + R +++ +G ++G+L +++
Sbjct: 340 SETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFLRTTLLFFLGGISGNLLSAVA 399
Query: 281 DPHVFLAGASGGVYALIAA 299
DP G+SG +YAL+ A
Sbjct: 400 DPCSITVGSSGSMYALLGA 418
>sp|Q6PIX5|RHDF1_MOUSE Inactive rhomboid protein 1 OS=Mus musculus GN=Rhbdf1 PE=1 SV=2
Length = 856
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + + NP + +R + +H G H +V++ Q+ +
Sbjct: 621 GYFHEEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSVCFQMTV 680
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ IIYL+ + G+LA++I P+ G +G + ++A +
Sbjct: 681 LRDLEKLAGWHRIAIIYLLSGITGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQ 740
Query: 310 LLKQQW 315
+L + W
Sbjct: 741 ILARPW 746
>sp|A7YWH9|RHDF1_BOVIN Inactive rhomboid protein 1 OS=Bos taurus GN=RHBDF1 PE=2 SV=1
Length = 856
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + + NP + +R + +H G H +V++ Q+ +
Sbjct: 621 GYFHEEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGVLHCLVSVCFQMTV 680
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ IIYL+ + G+LA++I P+ G +G + ++A +
Sbjct: 681 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQ 740
Query: 310 LLKQQW 315
+L + W
Sbjct: 741 ILARPW 746
>sp|Q96CC6|RHDF1_HUMAN Inactive rhomboid protein 1 OS=Homo sapiens GN=RHBDF1 PE=1 SV=2
Length = 855
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + + NP + +R + +H G H +V++ Q+ +
Sbjct: 620 GYFHEEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTV 679
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ IIYL+ + G+LA++I P+ G +G + ++A +
Sbjct: 680 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQ 739
Query: 310 LLKQQW 315
+L + W
Sbjct: 740 ILARPW 745
>sp|Q6PJF5|RHDF2_HUMAN Inactive rhomboid protein 2 OS=Homo sapiens GN=RHBDF2 PE=1 SV=2
Length = 856
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + L NP + +R + +H G H +V+++ Q+ +
Sbjct: 621 GYFHEEATLCSQVHCLDKVCGLLPFLNPEVPDQFYRLWLSLFLHAGVVHCLVSVVFQMTI 680
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ II+++ + G+LA++I P+ G +G + L+A +
Sbjct: 681 LRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWP 740
Query: 310 LLKQQW 315
LL++ W
Sbjct: 741 LLERPW 746
>sp|B0VX73|RHDF1_CALJA Inactive rhomboid protein 1 OS=Callithrix jacchus GN=RHBDF1 PE=3
SV=1
Length = 855
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + + NP + +R + +H G H +V++ Q+ +
Sbjct: 620 GYFHEEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTV 679
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ IIYL+ + G+LA++I P+ G +G + ++A +
Sbjct: 680 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQ 739
Query: 310 LLKQQW 315
+L + W
Sbjct: 740 ILARPW 745
>sp|B1MT31|RHDF1_CALMO Inactive rhomboid protein 1 OS=Callicebus moloch GN=RHBDF1 PE=3
SV=1
Length = 855
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + + NP + +R + +H G H +V++ Q+ +
Sbjct: 620 GYFHEEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTV 679
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ IIYL+ + G+LA++I P+ G +G + ++A +
Sbjct: 680 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQ 739
Query: 310 LLKQQW 315
+L + W
Sbjct: 740 ILARPW 745
>sp|A9L8T6|RHDF1_PAPAN Inactive rhomboid protein 1 OS=Papio anubis GN=RHBDF1 PE=3 SV=1
Length = 855
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + + NP + +R + +H G H +V++ Q+ +
Sbjct: 620 GYFHEEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSICFQMTV 679
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ IIYL+ + G+LA++I P+ G +G + ++A +
Sbjct: 680 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQ 739
Query: 310 LLKQQW 315
+L + W
Sbjct: 740 ILARPW 745
>sp|Q499S9|RHDF1_RAT Inactive rhomboid protein 1 OS=Rattus norvegicus GN=Rhbdf1 PE=2
SV=1
Length = 856
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%)
Query: 190 GFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILL 249
G+F +A + + + NP + +R + +H G H +V++ Q+ +
Sbjct: 621 GYFHEEATLCSQVHCMDDVCGLLPFLNPEVPDQFYRLWLSLFLHAGILHCLVSVCFQMTV 680
Query: 250 GIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRS 309
LE + W R+ IIYL+ + G+LA++I P+ G +G + ++A +
Sbjct: 681 LRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQ 740
Query: 310 LLKQQW 315
+L + W
Sbjct: 741 ILARPW 746
>sp|P54493|GLUP_BACSU Rhomboid protease GluP OS=Bacillus subtilis (strain 168) GN=gluP
PE=1 SV=2
Length = 507
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 176 PPPVIMIFISAVEIGFFLYDAMIVGDTYSLRGPMAKTLIYNPF-HRAEVWRFMTYMLVHV 234
P +FI+ + FFL + I G + + +A N + E WR +T +++H+
Sbjct: 176 KPTFTYLFIALQILMFFLLE--INGGSTNTETLVAFGAKENSLIAQGEWWRLLTPIVLHI 233
Query: 235 GGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSITDPHVFLAGASGGVY 294
G HL N L +G +E ++ R L+IYL + GS+A+ + P+ AGASG ++
Sbjct: 234 GIAHLAFNTLALWSVGTAVERMYGSGRFLLIYLAAGITGSIASFVFSPYPS-AGASGAIF 292
Query: 295 ALIAA 299
+ A
Sbjct: 293 GCLGA 297
>sp|Q6GV23|RHBL5_TOXGO Rhomboid-like protease 5 OS=Toxoplasma gondii GN=ROM5 PE=1 SV=1
Length = 841
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 221 AEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSIT 280
E++R + M +H G HL++N+ Q LE + R L +++VG ++GSL +++
Sbjct: 462 GEMFRVVWGMFLHGGWMHLLLNVSCQAQTLWILEPAWGFLRTLSLWIVGGVSGSLLSAVA 521
Query: 281 DPHVFLAGASGGVYALIAAHV 301
+P G+SG Y L+ A V
Sbjct: 522 NPCTVTVGSSGAFYGLLGALV 542
>sp|Q76NQ1|RHDF1_DROME Inactive rhomboid protein 1 OS=Drosophila melanogaster GN=rho-5 PE=2
SV=1
Length = 1429
Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 46/84 (54%)
Query: 222 EVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSITD 281
+++R +T + +H G HL + L+ Q L LE + R I+Y++ AG+L ++I
Sbjct: 1092 QLYRLLTSLCMHAGILHLAITLIFQHLFLADLERLIGTVRTAIVYIMSGFAGNLTSAILV 1151
Query: 282 PHVFLAGASGGVYALIAAHVATII 305
PH G S + ++A+ +A ++
Sbjct: 1152 PHRPEVGPSASLSGVVASLIALLV 1175
>sp|C8VCL5|Y0929_EMENI Uncharacterized rhomboid protein AN10929 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN10929 PE=3 SV=1
Length = 503
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 224 WRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYL-VGVLAGSLATSITDP 282
+RF+ M +H G H+ NLLVQ+ +G +E + WWR ++YL G+ L +
Sbjct: 252 FRFIIPMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSSGIWGFVLGGNYAGQ 311
Query: 283 HVFLAGASGGVYALIAAHVATIIMVRSLLKQQW 315
G SG ++ ++A V ++ + + W
Sbjct: 312 GEASCGCSGALFGILALFVLDLLYGWNDRQNPW 344
>sp|P96617|YDCA_BACSU Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168)
GN=ydcA PE=3 SV=1
Length = 199
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Query: 220 RAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATSI 279
E WR +T +L+H G HL+ N + L LE + R L++Y + G++ T +
Sbjct: 55 NGEWWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKARFLLVYAGSGIIGNIGTYV 114
Query: 280 TDPHVFL-AGASGGVYALIAAHVATIIMVRSLLKQQ 314
T+P ++ GASG ++ L ++ ++ L+ Q+
Sbjct: 115 TEPLDYVHVGASGAIFGLFGVYLFMVLFRNELIGQE 150
>sp|Q6IUY1|RHBL3_TOXGO Rhomboid-like protease 3 OS=Toxoplasma gondii GN=ROM3 PE=2 SV=1
Length = 263
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 208 PMAKTLI-----YNP-FHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWR 261
P +TL+ Y P F ++WR +T + +H HLV+NL+ + + + LE + +
Sbjct: 62 PNERTLMLLGAAYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTKK 121
Query: 262 VLIIYLVGVLAGSLATSITDPHVFLAGASGGVYALIAAHVATIIMVRSLLKQQ 314
L+ Y + + G+L + + P GAS + +I A + +V L ++
Sbjct: 122 FLVTYFLSAIVGNLLSMLMQPWALSVGASTAGFGIIGGMAAEVSVVWCKLSEE 174
>sp|P46116|AARA_PROST Rhomboid protease AarA OS=Providencia stuartii GN=aarA PE=1 SV=1
Length = 281
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 214 IYNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAG 273
IY + WR+ M++H G HL N L ++GI E + +++L IY++ +
Sbjct: 59 IYQLSLTGDWWRYPISMMLHSNGTHLAFNCLALFVIGIGCERAYGKFKLLAIYIISGIGA 118
Query: 274 SLATSI------------TDPHVFLA---GASGGVYALIAAHVATIIMV 307
+L ++ TD V++ GASG + + AA V +I V
Sbjct: 119 ALFSAYWQYYEISNSDLWTDSTVYITIGVGASGAIMGIAAASVIYLIKV 167
>sp|Q6CZL3|GLPG_ERWCT Rhomboid protease GlpG OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=glpG PE=3 SV=2
Length = 276
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 219 HRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVGVLAGSLATS 278
+ ++WR+ ++ L+H H++ NL+ LG P+E V ++L+I LV L A S
Sbjct: 131 QQLQLWRWFSHALLHFSLLHILFNLMWWWYLGGPVEKVLGTGKLLVIALVSALVSGWAQS 190
Query: 279 ITDPHVFLAGASGGVYALIA 298
F G SG VYAL+
Sbjct: 191 WCSGTYF-GGLSGVVYALMG 209
>sp|Q83PV6|GLPG_SHIFL Rhomboid protease GlpG OS=Shigella flexneri GN=glpG PE=3 SV=5
Length = 276
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YMQQKFSGP--WFGGLSGVVYALMG 209
>sp|A4WFK8|GLPG_ENT38 Rhomboid protease GlpG OS=Enterobacter sp. (strain 638) GN=glpG
PE=3 SV=1
Length = 276
Score = 39.7 bits (91), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 178 PVIMIFISAVEIGFFLYDAMIVGDTYSLRGPMAKTLIYNPFHRAEVWRFMTYMLVHVGGF 237
P ++ ++A + F + + +VGD R +A Y P + +VWR+ T+ L+H
Sbjct: 95 PFTLLLMAACILVFIIMN--VVGDQ---RVMIALAWPYGPAVQYDVWRYFTHALMHFSVL 149
Query: 238 HLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAGSLATSITDPHVFLAGASGGVYAL 296
H++ NLL LG +E ++++I ++ +L+G + + P + G SG VYAL
Sbjct: 150 HILFNLLWWWYLGGAVEKRLGSGKLIVITIISALLSGYVQHKFSGP--WFGGLSGVVYAL 207
Query: 297 IA 298
+
Sbjct: 208 MG 209
>sp|Q57IV1|GLPG_SALCH Rhomboid protease GlpG OS=Salmonella choleraesuis (strain SC-B67)
GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + EVWR+ T++ +H H++ NLL LG +E ++++I +V +L+G
Sbjct: 127 FDPVLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVVSALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|P44783|GLPG_HAEIN Rhomboid protease GlpG OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=glpG PE=1 SV=1
Length = 192
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 221 AEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLVG-VLAGSLATSI 279
+EVWR++++ LVH+ H++ NL + G +E ++L++Y+V + G + +
Sbjct: 48 SEVWRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYVQNYV 107
Query: 280 TDPHVFLAGASGGVYALIA 298
+ P F G SG VYA++
Sbjct: 108 SGPAFF--GLSGVVYAVLG 124
>sp|B7NMI8|GLPG_ECO7I Rhomboid protease GlpG OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|B7N156|GLPG_ECO81 Rhomboid protease GlpG OS=Escherichia coli O81 (strain ED1a)
GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|B2U3N2|GLPG_SHIB3 Rhomboid protease GlpG OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|Q31VK9|GLPG_SHIBS Rhomboid protease GlpG OS=Shigella boydii serotype 4 (strain Sb227)
GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|Q3YWA4|GLPG_SHISS Rhomboid protease GlpG OS=Shigella sonnei (strain Ss046) GN=glpG
PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPALKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|Q32AN6|GLPG_SHIDS Rhomboid protease GlpG OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPALKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|B6I2Y7|GLPG_ECOSE Rhomboid protease GlpG OS=Escherichia coli (strain SE11) GN=glpG
PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|B7M2I4|GLPG_ECO8A Rhomboid protease GlpG OS=Escherichia coli O8 (strain IAI1) GN=glpG
PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|B5YTX6|GLPG_ECO5E Rhomboid protease GlpG OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPALKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|Q8X6Z6|GLPG_ECO57 Rhomboid protease GlpG OS=Escherichia coli O157:H7 GN=glpG PE=3
SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPALKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|B7L4V0|GLPG_ECO55 Rhomboid protease GlpG OS=Escherichia coli (strain 55989 / EAEC)
GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|A7ZSV4|GLPG_ECO24 Rhomboid protease GlpG OS=Escherichia coli O139:H28 (strain E24377A
/ ETEC) GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|Q1R5L1|GLPG_ECOUT Rhomboid protease GlpG OS=Escherichia coli (strain UTI89 / UPEC)
GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
>sp|B1LI84|GLPG_ECOSM Rhomboid protease GlpG OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=glpG PE=3 SV=1
Length = 276
Score = 39.3 bits (90), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 215 YNPFHRAEVWRFMTYMLVHVGGFHLVVNLLVQILLGIPLEMVHRWWRVLIIYLV-GVLAG 273
++P + E WR+ T+ L+H H++ NLL LG +E ++++I L+ +L+G
Sbjct: 127 FDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITLISALLSG 186
Query: 274 SLATSITDPHVFLAGASGGVYALIA 298
+ + P + G SG VYAL+
Sbjct: 187 YVQQKFSGP--WFGGLSGVVYALMG 209
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.143 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,101,554
Number of Sequences: 539616
Number of extensions: 4903748
Number of successful extensions: 13213
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 13039
Number of HSP's gapped (non-prelim): 171
length of query: 317
length of database: 191,569,459
effective HSP length: 117
effective length of query: 200
effective length of database: 128,434,387
effective search space: 25686877400
effective search space used: 25686877400
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)