BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17564
(109 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9YHZ6|CDC45_XENLA Cell division control protein 45 homolog OS=Xenopus laevis GN=cdc45
PE=1 SV=2
Length = 567
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 1 MPLLQSKQLYNSMDLSIRRELPTMLSKMAADHQLDELIMPSFTLLHGYRTKIQASDYVYA 60
MPL Q KQ +NSMD+S++ L ML + A + ++ + +F++ G++ K ASD V+A
Sbjct: 321 MPLKQVKQKFNSMDISLKENLREMLEESANKFGMKDVRVQTFSVQFGFKNKFLASDIVFA 380
Query: 61 MLALLESPVR 70
+L+LLE+ R
Sbjct: 381 VLSLLENTER 390
>sp|Q9Z1X9|CDC45_MOUSE Cell division control protein 45 homolog OS=Mus musculus GN=Cdc45
PE=2 SV=2
Length = 566
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%)
Query: 1 MPLLQSKQLYNSMDLSIRRELPTMLSKMAADHQLDELIMPSFTLLHGYRTKIQASDYVYA 60
+PL Q KQ + SMD+S++ L M+ + A + ++ + +F++ G++ K ASD V+A
Sbjct: 320 LPLKQVKQKFQSMDVSLKGNLREMIEESANKFGMKDMRVQTFSIQFGFKHKFLASDVVFA 379
Query: 61 MLALLESP 68
++L+ESP
Sbjct: 380 TMSLMESP 387
>sp|O75419|CDC45_HUMAN Cell division control protein 45 homolog OS=Homo sapiens GN=CDC45
PE=1 SV=1
Length = 566
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 44/68 (64%)
Query: 1 MPLLQSKQLYNSMDLSIRRELPTMLSKMAADHQLDELIMPSFTLLHGYRTKIQASDYVYA 60
+PL Q KQ + +MD+S++ L M+ + A + ++ + +F++ G++ K ASD V+A
Sbjct: 320 LPLKQVKQKFQAMDISLKENLREMIEESANKFGMKDMRVQTFSIHFGFKHKFLASDVVFA 379
Query: 61 MLALLESP 68
++L+ESP
Sbjct: 380 TMSLMESP 387
>sp|O74113|CDC45_SCHPO Cell division control protein 45 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=sna41 PE=1 SV=1
Length = 638
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 1 MPLLQSKQLYNSMDLSIRRELPTMLSKMAADHQLDELIMPSFTLLHGYRTKIQASDYVYA 60
+ L++ KQ Y M++ +++ L + L + A + LD++I SFT +G++ + ASD YA
Sbjct: 357 LSLVECKQTYIHMNMDLKKTLKSSLKRFAPFYGLDDVIFHSFTRTYGFKCTLSASDVSYA 416
Query: 61 MLALLE 66
+ ALLE
Sbjct: 417 ISALLE 422
>sp|Q08032|CDC45_YEAST Cell division control protein 45 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC45 PE=1 SV=1
Length = 650
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 1 MPLLQSKQLYNSMDLSIRRELPTMLSKMAADHQLDELIMPSFTLLHGYRTKIQASDYVYA 60
+PL +++ + MD SI+REL + K + L ++I F GYR I AS++V A
Sbjct: 368 IPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSISASEFVEA 427
Query: 61 MLALLE 66
+ ALLE
Sbjct: 428 LTALLE 433
>sp|Q55GA4|CDC45_DICDI Cell division control protein 45 homolog OS=Dictyostelium
discoideum GN=cdc45 PE=3 SV=1
Length = 644
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%)
Query: 1 MPLLQSKQLYNSMDLSIRRELPTMLSKMAADHQLDELIMPSFTLLHGYRTKIQASDYVYA 60
+PL Q KQ YNSM++ +++L +L+ L L SF + ++I ASD VYA
Sbjct: 392 IPLDQVKQKYNSMNVHYKKQLKQLLAINGPKFGLVNLYFNSFLKKYSNNSEISASDTVYA 451
Query: 61 MLALLES 67
+ AL+ES
Sbjct: 452 VTALMES 458
>sp|Q99107|TSD2_USTMA Protein TSD2 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=TSD2
PE=2 SV=1
Length = 845
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 3 LLQSKQLYNSMDLSIRRELPTMLSKMAADHQLDELIMPSFTLLHGYRTK-IQASDYVYAM 61
L +Q Y M L +RR L L +A ++ L +L F G+RT + A+D V +
Sbjct: 478 LTAVRQNYTHMPLDLRRSLVRKLEAIAPEYGLTQLTYRGFERSLGFRTAPLGAADVVEGV 537
Query: 62 LALL 65
ALL
Sbjct: 538 SALL 541
>sp|Q4WEB4|FAL1_ASPFU ATP-dependent RNA helicase fal1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=fal1
PE=3 SV=2
Length = 398
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 155 DMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 214
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVR+L + D++ LE I +Y E +E K
Sbjct: 215 TTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWK 250
>sp|A5AAE5|FAL1_ASPNC ATP-dependent RNA helicase fal1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=fal1 PE=3 SV=2
Length = 399
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 156 DMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 215
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVR+L + D++ LE I +Y E +E K
Sbjct: 216 TTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWK 251
>sp|Q0CAS8|FAL1_ASPTN ATP-dependent RNA helicase fal1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=fal1 PE=3 SV=1
Length = 399
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 156 DMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 215
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVR+L + D++ LE I +Y E +E K
Sbjct: 216 TTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWK 251
>sp|A1D071|FAL1_NEOFI ATP-dependent RNA helicase fal1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=fal1
PE=3 SV=1
Length = 399
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 156 DMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 215
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVR+L + D++ LE I +Y E +E K
Sbjct: 216 TTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWK 251
>sp|Q5AUL4|FAL1_EMENI ATP-dependent RNA helicase fal1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=fal1
PE=3 SV=1
Length = 399
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 156 DMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 215
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVR+L + D++ LE I +Y E +E K
Sbjct: 216 TTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWK 251
>sp|A1C595|FAL1_ASPCL ATP-dependent RNA helicase fal1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=fal1 PE=3 SV=1
Length = 399
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 156 DMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 215
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVR+L + D++ LE I +Y E +E K
Sbjct: 216 TTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWK 251
>sp|Q2UAK1|FAL1_ASPOR ATP-dependent RNA helicase fal1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=fal1 PE=3 SV=1
Length = 398
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 155 DMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 214
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVR+L + D++ LE I +Y E +E K
Sbjct: 215 TTKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWK 250
>sp|Q0UAT0|FAL1_PHANO ATP-dependent RNA helicase FAL1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=FAL1 PE=3 SV=3
Length = 374
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYV-------YAMLAL 64
D+ RR L T KM + DEL+ F + YR A+ V Y +L +
Sbjct: 131 DMIRRRNLRTRNIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLEM 190
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVRIL + D++ LE + +Y E +E K
Sbjct: 191 TTKFMTDPVRILVKRDELTLEGLKQYFIAIEKEEWK 226
>sp|Q1DTB3|FAL1_COCIM ATP-dependent RNA helicase FAL1 OS=Coccidioides immitis (strain RS)
GN=FAL1 PE=3 SV=2
Length = 399
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYV-------YAMLAL 64
D+ RR L T KM + D+L+ F + YR A+ V Y +L++
Sbjct: 156 DMIRRRHLRTRHIKMLVLDEADDLLARGFREQIYDVYRYLPPATQVVVLSATLPYDVLSM 215
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVRIL + D++ LE + +Y E +E K
Sbjct: 216 TTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEEWK 251
>sp|A1L2I9|T214B_XENLA Transmembrane protein 214-B OS=Xenopus laevis GN=tmem214-b PE=2
SV=1
Length = 679
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 21/90 (23%)
Query: 16 SIRRELPTMLSKMAADH----QLDELIMPSFTLLHGYRTKIQASDYVYAMLALLESPVRI 71
S+ + P +L M DH L EL P+ LHGYR IQA LL+ P +
Sbjct: 175 SLLAKAPHVLDVMV-DHCIFSMLQELDKPTGESLHGYRICIQA--------VLLDKPKTV 225
Query: 72 LCRMDDVELENIPEYNQIFEHQEKKPSDCF 101
N+P+Y ++ +P C
Sbjct: 226 --------TSNLPKYLELLRSHLNRPMKCL 247
>sp|A6QSQ0|FAL1_AJECN ATP-dependent RNA helicase FAL1 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=FAL1 PE=3 SV=1
Length = 450
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 156 DMIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 215
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVRIL + D++ LE + +Y E +E K
Sbjct: 216 TTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEEWK 251
>sp|A0JMW6|T214A_XENLA Transmembrane protein 214-A OS=Xenopus laevis GN=tmem214-a PE=2
SV=1
Length = 681
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 21/90 (23%)
Query: 16 SIRRELPTMLSKMAADH----QLDELIMPSFTLLHGYRTKIQASDYVYAMLALLESPVRI 71
S+ + P +L M DH EL P+ LHGYR +QA LL+ P +
Sbjct: 177 SLLAKAPHVLDVMV-DHCIFSMFQELDKPTGESLHGYRICLQA--------VLLDKPKTV 227
Query: 72 LCRMDDVELENIPEYNQIFEHQEKKPSDCF 101
N+P+Y ++ Q +P C
Sbjct: 228 --------TNNLPKYLELLRSQVNRPMKCL 249
>sp|Q55D61|IF4A_DICDI Eukaryotic initiation factor 4A OS=Dictyostelium discoideum GN=tifA
PE=3 SV=1
Length = 405
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 13 MDLSIRRELPTMLSKMAADHQLDELIMPSFT---------LLHGYRTKIQAS----DYVY 59
+D+ R+ LPT KM + DE++ F L +G + + ++ D V
Sbjct: 162 LDMITRKSLPTRHIKMMILDEADEMLSLGFQQQINDVYRYLPNGTQIVLVSATLTQDVVS 221
Query: 60 AMLALLESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVRIL + D++ L+ I ++ E ++ K
Sbjct: 222 MTEKFMTKPVRILLKRDELTLDGIKQFFVSVEKEDWK 258
>sp|A7EM88|FAL1_SCLS1 ATP-dependent RNA helicase fal1 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=fal1 PE=3 SV=1
Length = 399
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 156 DMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 215
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVRIL + D++ LE + +Y E +E K
Sbjct: 216 TTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEEWK 251
>sp|Q6BT27|FAL1_DEBHA ATP-dependent RNA helicase FAL1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=FAL1 PE=3 SV=1
Length = 399
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 13 MDLSIRRELPTMLSKMAADHQLDELIMPSFT---------LLHGYRTKIQASDYVYAMLA 63
+D+ RR L T KM + DEL+ F L G + + ++ +L
Sbjct: 156 VDMIKRRNLATRNIKMMILDEADELMTKGFKEQIYEIYRYLPPGVQVVVVSATLSREVLE 215
Query: 64 LL----ESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PV+IL + DD+ LE I +Y+ E ++ K
Sbjct: 216 VTGKFTTDPVKILVKRDDITLEGIKQYHIQCEKEDWK 252
>sp|Q755W0|FAL1_ASHGO ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=FAL1
PE=3 SV=2
Length = 398
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 13 MDLSIRRELPTMLSKMAADHQLDELIMPSFTL---LHGYRTKI------------QASDY 57
+D+ RR + T KM + DEL+ + L+ TK+ + D
Sbjct: 153 LDMIKRRIINTRHVKMLVLDEADELLSETLGFKQQLYDIFTKLPSSVQVVVVSATMSKDV 212
Query: 58 VYAMLALLESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ + PV+IL + D+V LE I +Y+ + +E K
Sbjct: 213 LEVTKKFMSDPVKILVKRDEVSLEGIKQYHINVDKEEWK 251
>sp|Q6CXT4|IF4A_KLULA ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=TIF1 PE=3 SV=1
Length = 396
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 55 SDYVYAMLALLESPVRILCRMDDVELENIPEYNQIFEHQEKKPSDCFLD 103
D + ++ PVRIL + D++ LE I +Y E ++ K DC D
Sbjct: 207 GDVLEVTSKFMKDPVRILVKKDELTLEGIGQYYVNVEEEQYK-YDCLTD 254
>sp|A4QU31|FAL1_MAGO7 ATP-dependent RNA helicase FAL1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=FAL1 PE=3 SV=1
Length = 401
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 158 DMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 217
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVRIL + D++ LE + +Y E ++ K
Sbjct: 218 TTKFMTDPVRILVKRDELTLEGLKQYFIAIEKEDWK 253
>sp|Q2GWJ5|FAL1_CHAGB ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=FAL1 PE=3 SV=1
Length = 394
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 158 DMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 217
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVRIL + D++ LE + +Y E ++ K
Sbjct: 218 TTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEDWK 253
>sp|A5DVM3|IF4A_LODEL ATP-dependent RNA helicase eIF4A OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=TIF1 PE=3 SV=1
Length = 397
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 56 DYVYAMLALLESPVRILCRMDDVELENIPEYNQIFEHQEKKPSDCFLD 103
D + + +PVRIL + D++ LE I +Y E ++ K DC +D
Sbjct: 209 DVLEVTTKFMNNPVRILVKKDELTLEGIKQYFINVEVEDYK-FDCLVD 255
>sp|Q6BRN4|IF4A_DEBHA ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=TIF1 PE=3 SV=1
Length = 397
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 56 DYVYAMLALLESPVRILCRMDDVELENIPEYNQIFEHQEKKPSDCFLD 103
D + + +PVRIL + D++ LE I ++ I QE DC D
Sbjct: 209 DVLEVTTKFMNNPVRILVKKDELTLEGIKQF-YINVEQEDYKFDCLCD 255
>sp|Q4IAA0|FAL1_GIBZE ATP-dependent RNA helicase FAL1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FAL1 PE=3
SV=1
Length = 401
Score = 29.3 bits (64), Expect = 7.8, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 158 DMIRRRHLRTRHIKMLVLDEADELLNKGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 217
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVRIL + D++ LE + +Y E ++ K
Sbjct: 218 TTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEDWK 253
>sp|Q6FQQ6|IF4A_CANGA ATP-dependent RNA helicase eIF4A OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=TIF1 PE=3 SV=1
Length = 396
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 56 DYVYAMLALLESPVRILCRMDDVELENIPEYNQIFEHQEKKPSDCFLD 103
D + +++PVRIL + D++ LE I ++ E ++ K DC D
Sbjct: 208 DVLEVTAKFMQNPVRILVKKDELTLEGIKQFYVNVEEEQFK-YDCLTD 254
>sp|Q9P735|FAL1_NEUCR ATP-dependent RNA helicase fal-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=fal-1 PE=3 SV=2
Length = 400
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 13/96 (13%)
Query: 14 DLSIRRELPTMLSKMAADHQLDELIMPSF--TLLHGYRTKIQASDYVYAMLAL------- 64
D+ RR L T KM + DEL+ F + YR A+ V L
Sbjct: 157 DMIRRRHLRTRHIKMLVLDEADELLNQGFREQIYDVYRYLPPATQVVVVSATLPYDVLDM 216
Query: 65 ----LESPVRILCRMDDVELENIPEYNQIFEHQEKK 96
+ PVRIL + D++ LE + +Y E ++ K
Sbjct: 217 TTKFMTDPVRILVKRDELTLEGLKQYFIAVEKEDWK 252
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,884,338
Number of Sequences: 539616
Number of extensions: 1209156
Number of successful extensions: 2789
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2782
Number of HSP's gapped (non-prelim): 38
length of query: 109
length of database: 191,569,459
effective HSP length: 77
effective length of query: 32
effective length of database: 150,019,027
effective search space: 4800608864
effective search space used: 4800608864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)