RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17567
(362 letters)
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 138
Score = 42.2 bits (99), Expect = 1e-05
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 1 MRKRRGGAGEKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKK 60
++K+ A E++K E + E+ E E + + EE N K K+K +K + K
Sbjct: 47 IQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNK 106
Query: 61 KKKEEQSVKEIEESLKERKEK 81
+ +E + + E L+E+ +
Sbjct: 107 ENREAH-LAAMLERLQEKDKH 126
Score = 37.6 bits (87), Expect = 5e-04
Identities = 11/83 (13%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 1 MRKRRGGAGEKKKRIEKRNKEEE----KEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKK 56
R++ A K EKR E E E + + + + K+ ++
Sbjct: 56 ERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAA 115
Query: 57 KKKKKKKEEQSVKEIEESLKERK 79
++ +++++ +E+ ++ + ++
Sbjct: 116 MLERLQEKDKHAEEVRKNKELKE 138
Score = 33.7 bits (77), Expect = 0.010
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 20 KEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERK 79
EE +++ E E+ ++ E E K +K++ +++ +K ++ K +E L ++
Sbjct: 44 LEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFI-KMAKEKLAQKM 102
Query: 80 EK 81
E
Sbjct: 103 ES 104
Score = 32.2 bits (73), Expect = 0.034
Identities = 10/71 (14%), Positives = 35/71 (49%)
Query: 11 KKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKE 70
+ R ++ EE +++ + E+ + + + K +K++ +++ +K E++
Sbjct: 31 EFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNF 90
Query: 71 IEESLKERKEK 81
I+ + ++ +K
Sbjct: 91 IKMAKEKLAQK 101
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 41.3 bits (96), Expect = 9e-05
Identities = 12/78 (15%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 1 MRKRRGGAGEKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKK 60
+ + + + ++ E+ +E K+ E+ E ++ + +E+ + K +++++ K+
Sbjct: 223 LHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGF 282
Query: 61 KKKEEQSVKEIEESLKER 78
+K+ EI++ L+ +
Sbjct: 283 QKESRIMKNEIQD-LQTK 299
Score = 39.0 bits (90), Expect = 6e-04
Identities = 12/71 (16%), Positives = 38/71 (53%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVK 69
E +++ E+ +++E+ E ++ E +E ++ + K++++ K +++++ +E K
Sbjct: 225 EMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQK 284
Query: 70 EIEESLKERKE 80
E E ++
Sbjct: 285 ESRIMKNEIQD 295
Score = 37.4 bits (86), Expect = 0.002
Identities = 16/71 (22%), Positives = 37/71 (52%)
Query: 11 KKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKE 70
+ + + E + +NEQ ++KE +E K+ +K + + + K++++ ++E
Sbjct: 214 ESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQE 273
Query: 71 IEESLKERKEK 81
E+ LKE +K
Sbjct: 274 QEQLLKEGFQK 284
Score = 34.7 bits (79), Expect = 0.011
Identities = 10/78 (12%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKK--KKKKKKKKKKKKKKEEQS 67
++ +++ E E+ + E + + + E + K ++ + ++ ++ K+ +K E
Sbjct: 196 DQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQLTEKMEND 255
Query: 68 VKEIEESLKERKEKTLTE 85
++ + + L E
Sbjct: 256 RVQLLKEQERTLALKLQE 273
Score = 32.4 bits (73), Expect = 0.065
Identities = 10/56 (17%), Positives = 28/56 (50%)
Query: 16 EKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEI 71
K+ E+ + + Q KE+E K +++++ K+ +K+ + K + + ++
Sbjct: 245 LKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTKM 300
Score = 31.3 bits (70), Expect = 0.18
Identities = 11/72 (15%), Positives = 32/72 (44%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVK 69
++ EKE+ + E+ K + + K + ++K ++ ++K++ +E +
Sbjct: 188 MTDAILQTDQTLTEKEKEIEVERVKAESAQASAKMLHEMQRKNEQMMEQKERSYQEHLKQ 247
Query: 70 EIEESLKERKEK 81
E+ +R +
Sbjct: 248 LTEKMENDRVQL 259
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 33.5 bits (76), Expect = 0.028
Identities = 8/60 (13%), Positives = 25/60 (41%)
Query: 20 KEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERK 79
++ + E+ + +K + + KK +KK + K +K + +++ ++
Sbjct: 113 SRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQ 172
Score = 30.0 bits (67), Expect = 0.39
Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 12 KKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEE---QSV 68
+ + K+ + E+ + + + E K +KK + K +K K+ + +
Sbjct: 113 SRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQYIDAISNKQ 172
Query: 69 KEIEESLKERKEKTLTE 85
E+E + + + LTE
Sbjct: 173 GELENYVSDGYKTALTE 189
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 314
Score = 32.7 bits (74), Expect = 0.050
Identities = 10/47 (21%), Positives = 21/47 (44%)
Query: 31 EKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKE 77
K+KE+ ++ + ++ +K K + K K E +K+ E
Sbjct: 248 SKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSN 294
Score = 30.4 bits (68), Expect = 0.32
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 12 KKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEI 71
K+ I K+ +E K+ Q ++ ++ + + K K + KK +K +
Sbjct: 244 KEWISKKKEEYNKQAK-QYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFK 302
Query: 72 EESLKERKEK 81
EE + K K
Sbjct: 303 EELHSDYKNK 312
Score = 25.8 bits (56), Expect = 8.8
Identities = 15/72 (20%), Positives = 30/72 (41%)
Query: 15 IEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEES 74
+ + K E + E +EK ED ++ K+ KKK++ K+ K+ ++ K
Sbjct: 212 CQDKTKMIETLKVECKEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYK 271
Query: 75 LKERKEKTLTED 86
+ + E
Sbjct: 272 MYSEFKSIKPEV 283
>d1f3ub_ b.65.1.1 (B:) TFIIF alpha subunit, Rap74 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 31.3 bits (71), Expect = 0.083
Identities = 11/58 (18%), Positives = 25/58 (43%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQS 67
+ K+ ++EE + E N+K +++ ++KK K+ + E+Q
Sbjct: 36 ATWNQARLERDLSNKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQP 93
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 31.6 bits (72), Expect = 0.11
Identities = 7/32 (21%), Positives = 21/32 (65%)
Query: 34 KEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEE 65
+ + +K +KK+ ++KK+ + +++K +E+
Sbjct: 98 FDYFQLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 29.3 bits (66), Expect = 0.61
Identities = 8/30 (26%), Positives = 20/30 (66%)
Query: 40 EKNKKKKKKKKKKKKKKKKKKKKKEEQSVK 69
+ K++KK+ ++KK+ + +++K E+ K
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEEDYK 131
Score = 28.9 bits (65), Expect = 0.78
Identities = 7/28 (25%), Positives = 19/28 (67%)
Query: 39 EEKNKKKKKKKKKKKKKKKKKKKKKEEQ 66
+ + ++KK+ ++KK+ + +++K EE
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 28.5 bits (64), Expect = 0.96
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 20 KEEEKEENEQEEK--EKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEE 73
KE N E K + D + + + +K++KK+ ++KK+ + E+ ++ EE
Sbjct: 75 KESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLER--EKFEE 128
Score = 27.8 bits (62), Expect = 1.7
Identities = 7/24 (29%), Positives = 17/24 (70%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKE 33
E+KK++ + K++ + E E+ E++
Sbjct: 106 EQKKQLTSQEKKQIRLEREKFEED 129
>d1u2ma_ f.48.1.1 (A:) Periplasmic chaperon skp (HlpA)
{Escherichia coli [TaxId: 562]}
Length = 143
Score = 30.7 bits (69), Expect = 0.12
Identities = 9/64 (14%), Positives = 23/64 (35%)
Query: 18 RNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKE 77
+ ++ + E E + E + + + K KK + K + K++ +
Sbjct: 16 QQVAQKTGVSNTLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQT 75
Query: 78 RKEK 81
+K
Sbjct: 76 FAQK 79
>d2lefa_ a.21.1.1 (A:) Lymphoid enhancer-binding factor, LEF1
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 86
Score = 29.8 bits (67), Expect = 0.12
Identities = 8/48 (16%), Positives = 21/48 (43%)
Query: 16 EKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKK 63
+ + +E+ + E +++ + + KKKK+K++K
Sbjct: 39 RRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK 86
Score = 27.9 bits (62), Expect = 0.48
Identities = 8/55 (14%), Positives = 21/55 (38%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKE 64
+ + +R +EE + + + + + KKKK+K+++
Sbjct: 32 AINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK 86
Score = 26.4 bits (58), Expect = 1.7
Identities = 9/44 (20%), Positives = 18/44 (40%)
Query: 22 EEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEE 65
E + + E E + + + + KKKK+K+E+
Sbjct: 43 ALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK 86
>d1d7qa_ b.40.4.5 (A:) Translation initiation factor-1a, eIF1a
{Human (Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 30.6 bits (69), Expect = 0.12
Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 41 KNKKKKKKKKKKKKK-----KKKKKKKKEEQSVKEIEESL 75
KNK K K +++ K K++ K++ Q ++ + L
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKML 41
Score = 25.6 bits (56), Expect = 6.2
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 50 KKKKKKKKKKKKKKEEQSVKEIEESLKERKE 80
K K K K +++ K E ++ E KE +
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKEDGQ 32
>d1v63a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 29.9 bits (67), Expect = 0.13
Identities = 6/46 (13%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 21 EEEKEENEQE-EKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEE 65
+ +KE ++ E+++ + + K + + K+ K +
Sbjct: 50 QSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRK 95
Score = 28.7 bits (64), Expect = 0.33
Identities = 5/46 (10%), Positives = 19/46 (41%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKK 55
+K+ + +++ + + + K +++ K+ K+K
Sbjct: 52 QKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSG 97
Score = 28.7 bits (64), Expect = 0.40
Identities = 6/47 (12%), Positives = 18/47 (38%)
Query: 16 EKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKK 62
++ ++ E +Q + + K+ + + K+ K+K
Sbjct: 51 SQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSG 97
Score = 27.2 bits (60), Expect = 1.2
Identities = 7/48 (14%), Positives = 19/48 (39%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKK 57
+ +K K+ EE++ + + +++ K+ K+K
Sbjct: 50 QSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSG 97
>d2fgea3 d.185.1.1 (A:272-539) Presequence protease 1, PREP1 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 268
Score = 31.1 bits (70), Expect = 0.17
Identities = 7/51 (13%), Positives = 22/51 (43%)
Query: 25 EENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESL 75
+ + ++E E+ + K ++ + + ++ K +Q + E+L
Sbjct: 213 DPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETPDPPEAL 263
Score = 30.4 bits (68), Expect = 0.26
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 43 KKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERKEKTLTEDS 87
+K +++ ++K +K K E+ + E+ + +E K K T D
Sbjct: 215 EKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETPDP 259
Score = 30.0 bits (67), Expect = 0.41
Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 21 EEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESL 75
E+ + E EEK +E+ K ++ + + ++ K K+E E +
Sbjct: 214 PEKATQEEVEEKNI--LEKVKAAMTEEDLAELARATEELKLKQETPDPPEALRCV 266
>d2daqa1 b.34.9.2 (A:8-104) Histone-lysine N-methyltransferase
NSD3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 97
Score = 29.6 bits (66), Expect = 0.18
Identities = 5/32 (15%), Positives = 15/32 (46%)
Query: 48 KKKKKKKKKKKKKKKKEEQSVKEIEESLKERK 79
+ K + + K +++++E + +E K
Sbjct: 65 EGDKSFAEGQTSINKTFKKALEEAAKRFQELK 96
>d1ek8a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Escherichia
coli [TaxId: 562]}
Length = 185
Score = 30.3 bits (68), Expect = 0.21
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 16 EKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEE------QSVK 69
K + + E EQ +V + N K K K K+ + ++ +++ ++K
Sbjct: 110 RKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIK 169
Query: 70 EIEESLKERKEKTLTE 85
+IE +L + KE L +
Sbjct: 170 KIEAALAD-KEAELMQ 184
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus
thermophilus, strain hb27 [TaxId: 274]}
Length = 110
Score = 29.5 bits (66), Expect = 0.23
Identities = 11/62 (17%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 16 EKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESL 75
E + ++ +E + E + + ++K+ + K ++ K+ EE ++E E L
Sbjct: 36 EVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEA-LREKEARL 94
Query: 76 KE 77
+
Sbjct: 95 EA 96
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 30.5 bits (69), Expect = 0.24
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 34 KEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEE 65
+ + + +K+ K++K K K++ +K +E
Sbjct: 106 SQYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 28.5 bits (64), Expect = 1.1
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 40 EKNKKKKKKKKKKKKKKKKKKKKKEEQ 66
+ + +K+ K++K K K++ +K +
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLK 136
Score = 28.1 bits (63), Expect = 1.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKE 33
E +K++ K K + KEENE+ KE
Sbjct: 114 EARKQMSKEEKLKIKEENEKLLKE 137
Score = 28.1 bits (63), Expect = 1.3
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 20 KEEEKEENEQEEK-EKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKE 70
KE EE K D + K + + +K+ K++K K KEE
Sbjct: 84 KEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLL 135
Score = 28.1 bits (63), Expect = 1.5
Identities = 6/28 (21%), Positives = 18/28 (64%)
Query: 39 EEKNKKKKKKKKKKKKKKKKKKKKKEEQ 66
+ + + +K+ K++K K K++ +K ++
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 26.2 bits (58), Expect = 5.7
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 43 KKKKKKKKKKKKKKKKKKKKKEEQSVKE 70
K + + +K+ K++K K K++ E+ +KE
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKE 137
>d2c6ja1 a.264.1.1 (A:15-308) Duffy receptor, alpha form {Plasmodium
knowlesi [TaxId: 5850]}
Length = 294
Score = 30.8 bits (69), Expect = 0.25
Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 10/82 (12%)
Query: 10 EKKKRIEKRNKE--EEKEENEQEEKEKEDVEEE--------KNKKKKKKKKKKKKKKKKK 59
E K K N++ + N + KKK+ K KK
Sbjct: 188 ELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKKKQWDVLSTKFSSVKK 247
Query: 60 KKKKEEQSVKEIEESLKERKEK 81
+K +++ + LK+
Sbjct: 248 TQKIGTENIATAYDILKQELNG 269
Score = 28.4 bits (63), Expect = 1.3
Identities = 8/65 (12%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Query: 12 KKRIEKRNKEEEKEENE-QEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKE 70
+ I ++ K+ + + K+ + + E K++ K+ + E
Sbjct: 225 DQWITRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEINKRDN 284
Query: 71 IEESL 75
+ L
Sbjct: 285 LYNHL 289
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I,
dispensable insert domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 72
Score = 28.2 bits (63), Expect = 0.27
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 21 EEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVK-EIEESLKE 77
+ +KE+ ++ + + + K K KK + KKK ++ EEQ +K E++ + +E
Sbjct: 12 DAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDRE 69
>d1v64a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 108
Score = 28.4 bits (63), Expect = 0.48
Identities = 7/45 (15%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 21 EEEKEENEQE-EKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKE 64
++EK+ ++ +++K+D E E + + ++++++ ++K
Sbjct: 57 QKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLN 101
Score = 27.6 bits (61), Expect = 0.88
Identities = 9/47 (19%), Positives = 20/47 (42%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKK 56
EK +K +++++ E E + EEE+ + ++K
Sbjct: 59 EKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNISGP 105
Score = 27.6 bits (61), Expect = 1.1
Identities = 4/48 (8%), Positives = 25/48 (52%)
Query: 16 EKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKK 63
++++ +K + ++++ E E + ++ ++++++ ++K
Sbjct: 58 KEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNISGP 105
Score = 25.7 bits (56), Expect = 3.9
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 38 EEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERKEKTLTEDS 87
++EK+ KK +KKK + + + E +E + L E K ++ S
Sbjct: 57 QKEKDAYHKKCDQKKKDYEVELLRFLESLPEEEQQRVLGEEKMLNISGPS 106
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 332
Score = 29.6 bits (66), Expect = 0.52
Identities = 7/27 (25%), Positives = 21/27 (77%)
Query: 40 EKNKKKKKKKKKKKKKKKKKKKKKEEQ 66
++N+K+++ ++K ++ K K+K ++E+
Sbjct: 305 KENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.6 bits (66), Expect = 0.66
Identities = 7/26 (26%), Positives = 18/26 (69%)
Query: 38 EEEKNKKKKKKKKKKKKKKKKKKKKK 63
E +K ++ ++K ++ K K+K +K++
Sbjct: 306 ENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.2 bits (65), Expect = 0.86
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 29 QEEKEKEDVEEEKNKKKKKKKKKKKKKK 56
+E +K EEK ++ K K+K +K++
Sbjct: 304 VKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 28.8 bits (64), Expect = 1.0
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 35 EDVEEEKNKKKKKKKKKKKKKKKKKKKKKE 64
+E K+++ ++K ++ K K+K +KE
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 28.4 bits (63), Expect = 1.2
Identities = 7/30 (23%), Positives = 20/30 (66%)
Query: 34 KEDVEEEKNKKKKKKKKKKKKKKKKKKKKK 63
+ V+E + +++ ++K ++ K K+K +K+
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 28.0 bits (62), Expect = 1.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 28 EQEEKEKEDVEEEKNKKKKKKKKKKKKKKKK 58
Q KE + E + K ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 28.0 bits (62), Expect = 1.9
Identities = 5/31 (16%), Positives = 19/31 (61%)
Query: 31 EKEKEDVEEEKNKKKKKKKKKKKKKKKKKKK 61
+ ++ ++ + ++K ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 26.5 bits (58), Expect = 5.8
Identities = 7/30 (23%), Positives = 19/30 (63%)
Query: 41 KNKKKKKKKKKKKKKKKKKKKKKEEQSVKE 70
K+ +K+++ ++K ++ K +E++ KE
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 26.5 bits (58), Expect = 6.2
Identities = 6/31 (19%), Positives = 16/31 (51%)
Query: 17 KRNKEEEKEENEQEEKEKEDVEEEKNKKKKK 47
+ +E ++ E EEK + ++ +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 26.1 bits (57), Expect = 6.5
Identities = 6/32 (18%), Positives = 18/32 (56%)
Query: 35 EDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQ 66
+ + +K+++ ++K ++ K K+K E+
Sbjct: 298 NMFLQAVKENQKRRETEEKMRRAKLAKEKAEK 329
>d1ge9a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Aquifex
aeolicus [TaxId: 63363]}
Length = 184
Score = 29.1 bits (65), Expect = 0.53
Identities = 14/77 (18%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 15 IEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEE------QSV 68
E+R +E + ++ E+ + V + + K+ ++ + + +KK+ E + +
Sbjct: 108 TEERRRELVRLLHKITEEARVRVRNVRREAKEMIEELEGISEDEKKRALERLQKLTDKYI 167
Query: 69 KEIEESLKERKEKTLTE 85
EI + ++ KEK +
Sbjct: 168 DEINKLMEA-KEKEIMS 183
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret
disjunctional) {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 368
Score = 29.5 bits (65), Expect = 0.60
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 17 KRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKK 50
++ EE NEQ+ E E +E+ + ++K+
Sbjct: 2 RQRTEELLRCNEQQAAELETCKEQLFQSNMERKE 35
>d2j01t1 b.34.5.6 (T:1-138) Ribosomal protein L19 {Thermus
thermophilus [TaxId: 274]}
Length = 138
Score = 28.4 bits (63), Expect = 0.65
Identities = 4/35 (11%), Positives = 16/35 (45%)
Query: 1 MRKRRGGAGEKKKRIEKRNKEEEKEENEQEEKEKE 35
+R +K R +++ ++++ ++E +
Sbjct: 102 IRNLSDREIRRKLRADRKRIDQDRAAERAAKEEAQ 136
Score = 25.7 bits (56), Expect = 5.6
Identities = 5/28 (17%), Positives = 16/28 (57%)
Query: 43 KKKKKKKKKKKKKKKKKKKKKEEQSVKE 70
++ ++K + +K+ + + E++ KE
Sbjct: 106 SDREIRRKLRADRKRIDQDRAAERAAKE 133
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse
gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 248
Score = 29.4 bits (65), Expect = 0.67
Identities = 3/45 (6%), Positives = 20/45 (44%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKK 54
+ + + + + + E + ++ D E+ + + + + +++
Sbjct: 204 DDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDRYRRR 248
Score = 25.9 bits (56), Expect = 7.0
Identities = 10/64 (15%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 2 RKRRGGAGEKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKK--KKKKKKKKKKKKK 59
R R AG K +++ + + E+ K E K+ + +K ++ + + +
Sbjct: 185 RTSRLFAGGLTKGASFLLEDDSELLSAFIERAKLYDIEFKSIDEVDFEKLSRELDESRDR 244
Query: 60 KKKK 63
+++
Sbjct: 245 YRRR 248
>d1vqob1 b.43.3.2 (B:1-337) Ribosomal protein L3 {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 337
Score = 29.3 bits (65), Expect = 0.68
Identities = 7/56 (12%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 43 KKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERKEKTLTEDSQCDTMIPVFKK 98
+ + + + E+ +++ E+ + L + D + V KK
Sbjct: 103 DEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDL-GDLRLITHTVPDAVPSVPKK 157
>d2qqia2 b.18.1.2 (A:273-427) B1 domain of neuropilin-1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 155
Score = 28.3 bits (62), Expect = 0.86
Identities = 14/93 (15%), Positives = 29/93 (31%), Gaps = 8/93 (8%)
Query: 206 LLNTQGWWRCFANNYLQWAAVGTWILLNTQGFISQGIGLNNKEYLIWYILFIV------- 258
L + W ++Y +W V +L +QG + + + +
Sbjct: 36 LNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGE 95
Query: 259 -FVTYAMLPLPLKWCFIGGCTTSVLHVIITAQI 290
++T P+ + T V+ V I
Sbjct: 96 DWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLI 128
>d1zroa1 a.264.1.1 (A:8-282) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 275
Score = 28.8 bits (64), Expect = 0.86
Identities = 11/83 (13%), Positives = 31/83 (37%), Gaps = 6/83 (7%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEK-----EDVEEEKNKKKKK-KKKKKKKKKKKKKKKK 63
E+ R + + + + +++ + + K + K+ + +K K+
Sbjct: 183 ERDNRAKLPKSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKEN 242
Query: 64 EEQSVKEIEESLKERKEKTLTED 86
E + +I E+ + K L +
Sbjct: 243 AENYLIKISENKNDAKVSLLLNN 265
Score = 28.1 bits (62), Expect = 1.5
Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Query: 12 KKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQ 66
+ I + K E +++ E +K E +N K + K K + +
Sbjct: 216 RDWIIRS-KFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAE 269
Score = 27.3 bits (60), Expect = 2.9
Identities = 10/53 (18%), Positives = 18/53 (33%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKK 62
K +KE E ++ +E E ++ +NK K + K
Sbjct: 221 RSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAEYSKY 273
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 28.0 bits (62), Expect = 0.93
Identities = 12/72 (16%), Positives = 29/72 (40%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVK 69
+KK I + + E E E + K K++K + + EE+ ++
Sbjct: 53 SEKKTISPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLR 112
Query: 70 EIEESLKERKEK 81
+ +E + +++
Sbjct: 113 QQQELFAKARQQ 124
>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II,
PAC) {Streptococcus mutans [TaxId: 1309]}
Length = 377
Score = 28.8 bits (64), Expect = 1.0
Identities = 12/67 (17%), Positives = 22/67 (32%), Gaps = 5/67 (7%)
Query: 43 KKKKKKKKKKKKKKKK-----KKKKKEEQSVKEIEESLKERKEKTLTEDSQCDTMIPVFK 97
+K K K + K E + K + +L E + L D + + + +
Sbjct: 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPNANLSLTT 60
Query: 98 KGVLYKG 104
G K
Sbjct: 61 DGKFLKA 67
>d1qasa3 c.1.18.1 (A:299-625) Phospholipase C isozyme D1 (PLC-D1)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 327
Score = 28.8 bits (64), Expect = 1.1
Identities = 31/193 (16%), Positives = 52/193 (26%), Gaps = 31/193 (16%)
Query: 25 EENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERKEKTLT 84
+ + E+ K K K KK + E V + E+ + E +
Sbjct: 118 QPLDGVTTSLPSPEQLKGKILLKGKKLGGLLPAGGENGSEATDVSDEVEAAEMEDEAVRS 177
Query: 85 EDSQCDTMIPVFKKGVLYK-GIYCPSL-TNSFREPSLEMSYQRYSHRQRQKSLIIVNLVD 142
+ + L IYC S+ F P Q +
Sbjct: 178 QVQHKPKEDKLKLVPELSDMIIYCKSVHFGGFSSPGTSG--QAFYEM------------- 222
Query: 143 MVLKAVLTVAWISYNEVELSQIDSTKLTWTVYTMMSNLAMCLLGWWRCFANNY---LQWA 199
S++E ++ V +S L+ WR ++NY W
Sbjct: 223 -----------ASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWN 271
Query: 200 AVGTWILLNTQGW 212
+ LN Q
Sbjct: 272 GGCQIVALNFQTP 284
>d1je5a_ b.40.4.7 (A:) gp2.5 {Bacteriophage T7 [TaxId: 10760]}
Length = 197
Score = 28.1 bits (62), Expect = 1.2
Identities = 4/48 (8%), Positives = 15/48 (31%)
Query: 23 EKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKE 70
++ + E V+ + ++ + + KK + +
Sbjct: 45 PNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEG 92
Score = 26.9 bits (59), Expect = 3.3
Identities = 6/55 (10%), Positives = 17/55 (30%), Gaps = 1/55 (1%)
Query: 20 KEEEKEENEQEEKEKEDVEEEKNKKKKK-KKKKKKKKKKKKKKKKEEQSVKEIEE 73
++ ++ + EE ++ + + KK K E + +
Sbjct: 45 PNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEGDMPFFDN 99
Score = 26.5 bits (58), Expect = 4.2
Identities = 9/85 (10%), Positives = 20/85 (23%), Gaps = 5/85 (5%)
Query: 16 EKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKK---KKKKKKKEEQSVKEIE 72
+ R + E + E+ EE + + KK + +
Sbjct: 48 DPRCQRMVDEIVKCHEEAYAAAVEEY--EANPPAVARGKKPLKPYEGDMPFFDNGDGTTT 105
Query: 73 ESLKERKEKTLTEDSQCDTMIPVFK 97
K + + + V
Sbjct: 106 FKFKCYASFQDKKTKETKHINLVVV 130
>d2zjro1 b.155.1.1 (O:5-98) Ribosomal protein L21p {Deinococcus
radiodurans [TaxId: 1299]}
Length = 94
Score = 27.1 bits (60), Expect = 1.2
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 37 VEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEE 73
VE + KK +K K + +++ ++ + +I
Sbjct: 57 VEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILG 93
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS)
C-terminal domain {Thermus thermophilus [TaxId: 274]}
Length = 66
Score = 26.2 bits (58), Expect = 1.3
Identities = 12/60 (20%), Positives = 29/60 (48%)
Query: 12 KKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEI 71
++R EKR KE + K EK K+ + ++ + K+ ++ ++ +++ +I
Sbjct: 6 RRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREALSQI 65
Score = 25.8 bits (57), Expect = 2.2
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 36 DVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERKEKTLTE 85
DVEE + +++K+ K+ ++ ++K ++ + + E +E L E
Sbjct: 1 DVEEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKE 50
Score = 24.7 bits (54), Expect = 4.4
Identities = 10/62 (16%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Query: 24 KEENEQEEKEKEDVEEEKNKKKKK--------KKKKKKKKKKKKKKKKEEQSVKEIEESL 75
+E ++EK +++ + ++K K K+ + ++ + K+ + + I E+L
Sbjct: 3 EEWRRRQEKRLKELLALAERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREAL 62
Query: 76 KE 77
+
Sbjct: 63 SQ 64
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 28.4 bits (63), Expect = 1.4
Identities = 8/63 (12%), Positives = 20/63 (31%)
Query: 12 KKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEI 71
K + + + + E ++ + N + +K++ K K+
Sbjct: 180 CKTYFYQKELGYSGDFIYDHAEGCEISWKDNAHNVTVDLEMRKQRNKTTKQVRTIEKITP 239
Query: 72 EES 74
ES
Sbjct: 240 IES 242
Score = 28.1 bits (62), Expect = 1.9
Identities = 8/52 (15%), Positives = 27/52 (51%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKK 61
E++ RI ++ + E+ + ++ E + E + +++K + ++++ K
Sbjct: 64 EQRSRIISGQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKG 115
Score = 25.7 bits (56), Expect = 8.3
Identities = 7/59 (11%), Positives = 20/59 (33%)
Query: 11 KKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVK 69
K +K + E + ++ + + +K++ K K+ + E+
Sbjct: 181 KTYFYQKELGYSGDFIYDHAEGCEISWKDNAHNVTVDLEMRKQRNKTTKQVRTIEKITP 239
>d2nlua1 b.34.9.2 (A:1-100) Hepatoma-derived growth factor, HDGF
{Human (Homo sapiens) [TaxId: 9606]}
Length = 100
Score = 26.8 bits (59), Expect = 1.4
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 50 KKKKKKKKKKKKKKEEQSVKEIEESLKER 78
+ K+K K K+K + + EIE + +
Sbjct: 68 ESKEKFGKPNKRKGFSEGLWEIENNPTVK 96
>d1dd5a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermotoga
maritima [TaxId: 2336]}
Length = 184
Score = 27.6 bits (61), Expect = 1.7
Identities = 10/56 (17%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 36 DVEEEKNKKKKKKKKKKKKKKKKKKKKKEE------QSVKEIEESLKERKEKTLTE 85
++ E KK K+ +K+ + K+ + E + +++++E + K++ + E
Sbjct: 129 NIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEI-KKEEIME 183
>d2fcwa1 a.13.1.1 (A:216-320) alpha-2-Macroglobulin receptor
associated protein (RAP) {Human (Homo sapiens) [TaxId:
9606]}
Length = 105
Score = 26.8 bits (59), Expect = 2.0
Identities = 12/67 (17%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 13 KRIEK-RNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEI 71
+IEK + +++ E ++ + E V + + + ++K + + K+ VK+
Sbjct: 37 AKIEKHNHYQKQLEIAHEKLRHAESVGDGERVSRSREKHALLEGRTKELGYT----VKKH 92
Query: 72 EESLKER 78
+ L R
Sbjct: 93 LQDLSGR 99
>d1jk0a_ a.25.1.2 (A:) Ribonucleotide reductase R2 {Baker's yeast
(Saccharomyces cerevisiae), Y2 [TaxId: 4932]}
Length = 334
Score = 27.8 bits (61), Expect = 2.0
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 32 KEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERKEKTLTEDSQCDT 91
KE E + EE K K+K K + K + V + E++E L ED +
Sbjct: 3 KELETLREENRVKSDMLKEKLSKDAENHKAYLKSHQVHRHKLKEMEKEEPLLNEDKERTV 62
Query: 92 MIP 94
+ P
Sbjct: 63 LFP 65
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase
{Clostridium thermocellum [TaxId: 1515]}
Length = 164
Score = 27.3 bits (60), Expect = 2.1
Identities = 6/33 (18%), Positives = 15/33 (45%)
Query: 41 KNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEE 73
+K KK+ + K K+E + ++++
Sbjct: 13 IKNAQKFKKENESKYNTTIITNKDELTFEKVKL 45
>d3bn0a1 d.27.1.1 (A:2-102) Ribosomal protein S16 {Aquifex aeolicus
[TaxId: 63363]}
Length = 101
Score = 26.3 bits (58), Expect = 2.1
Identities = 3/22 (13%), Positives = 9/22 (40%)
Query: 43 KKKKKKKKKKKKKKKKKKKKKE 64
+ + + K+ +K+E
Sbjct: 80 EVVPEGYEMKRVGDYYVFEKRE 101
Score = 26.3 bits (58), Expect = 2.3
Identities = 3/29 (10%), Positives = 11/29 (37%)
Query: 32 KEKEDVEEEKNKKKKKKKKKKKKKKKKKK 60
++E + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 26.3 bits (58), Expect = 2.7
Identities = 4/23 (17%), Positives = 9/23 (39%)
Query: 43 KKKKKKKKKKKKKKKKKKKKKEE 65
K+ + + K+ +K E
Sbjct: 79 KEVVPEGYEMKRVGDYYVFEKRE 101
Score = 25.9 bits (57), Expect = 2.9
Identities = 3/29 (10%), Positives = 11/29 (37%)
Query: 33 EKEDVEEEKNKKKKKKKKKKKKKKKKKKK 61
+ +E + + K+ +K++
Sbjct: 73 WNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
Score = 25.6 bits (56), Expect = 5.0
Identities = 3/22 (13%), Positives = 9/22 (40%)
Query: 45 KKKKKKKKKKKKKKKKKKKEEQ 66
K+ + + K+ E++
Sbjct: 79 KEVVPEGYEMKRVGDYYVFEKR 100
Score = 25.2 bits (55), Expect = 5.5
Identities = 2/23 (8%), Positives = 10/23 (43%)
Query: 40 EKNKKKKKKKKKKKKKKKKKKKK 62
++ + + K+ +K++
Sbjct: 79 KEVVPEGYEMKRVGDYYVFEKRE 101
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 27.6 bits (60), Expect = 2.2
Identities = 10/75 (13%), Positives = 23/75 (30%)
Query: 12 KKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEI 71
+ IE +E + K + + +K K + + + +
Sbjct: 128 VEDIEFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMH 187
Query: 72 EESLKERKEKTLTED 86
+ +L E K +D
Sbjct: 188 KLNLPEDPTKWSQDD 202
Score = 27.2 bits (59), Expect = 3.2
Identities = 10/64 (15%), Positives = 17/64 (26%)
Query: 29 QEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERKEKTLTEDSQ 88
+ E + K K+ K +K K + E S + E+ L
Sbjct: 135 EREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHKLNLPED 194
Query: 89 CDTM 92
Sbjct: 195 PTKW 198
Score = 26.8 bits (58), Expect = 3.9
Identities = 12/62 (19%), Positives = 24/62 (38%)
Query: 19 NKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKER 78
+ + E+ E E+E + K K K+ K +K K + + + I + +
Sbjct: 123 DYHDPVEDIEFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDV 182
Query: 79 KE 80
E
Sbjct: 183 WE 184
>d1h7ca_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 103
Score = 26.6 bits (59), Expect = 2.2
Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 13 KRIEKRNKEEEKEENEQE---EKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVK 69
+R+ K EKE +QE EK + + E + KK+ + ++ + +++ E +
Sbjct: 14 RRLVKERVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYL 73
Query: 70 EIEESLKERKEKTLTED 86
+++ L+ K+ E+
Sbjct: 74 DLQRILENEKDLEEAEE 90
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA
probable tRNA-binding arm {Staphylococcus aureus
[TaxId: 1280]}
Length = 65
Score = 25.5 bits (56), Expect = 2.3
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 20 KEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEE 73
EE N+ K +D+E+ KK K+ +++ ++K E+ + EE
Sbjct: 9 NEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQEE 62
Score = 24.3 bits (53), Expect = 6.9
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 20 KEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERK 79
E KE NE+ + +D+ + +K+ + KK K+ +++ + + ++IEE K +
Sbjct: 2 DEYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEG-KRLQ 60
Query: 80 EK 81
E+
Sbjct: 61 EE 62
>d1xu6a_ g.16.3.1 (A:) Variant surface glycoprotein MITAT 1.2, VSG
221, C-terminal domain {Trypanosoma brucei brucei
[TaxId: 5702]}
Length = 80
Score = 26.1 bits (57), Expect = 2.3
Identities = 13/63 (20%), Positives = 27/63 (42%)
Query: 1 MRKRRGGAGEKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKK 60
+ ++ A +++ E +K++NE + K + E K K++ KK + K
Sbjct: 8 LTQKHKPAESQQQAAETEGSCNKKDQNECKSPCKWHNDAENKKCTLDKEEAKKVADETAK 67
Query: 61 KKK 63
K
Sbjct: 68 DGK 70
Score = 24.5 bits (53), Expect = 7.0
Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 10 EKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKN--KKKKKKKKKKKKKKKKKKKKKEEQS 67
E + K + +++ + K+D E K+ K + KK K++ KK +++
Sbjct: 6 EVLTQKHKPAESQQQAAETEGSCNKKDQNECKSPCKWHNDAENKKCTLDKEEAKKVADET 65
Query: 68 VKE 70
K+
Sbjct: 66 AKD 68
>d1wqga1 d.67.3.1 (A:2-184) Ribosome recycling factor, RRF
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 183
Score = 27.2 bits (60), Expect = 2.7
Identities = 10/55 (18%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 37 VEEEKNKKKKKKKKKKKKKKKKKKKKKEE------QSVKEIEESLKERKEKTLTE 85
+ + ++ + +K+ + + + + +++ Q V +I+E +K KE L E
Sbjct: 130 IRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKH-KEGELLE 183
>d1wvka_ g.82.1.1 (A:) Expressed protein At2g23090/F21P24.15
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 86
Score = 25.9 bits (57), Expect = 2.8
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 34 KEDVEEEKNKKKKKKKKKKKKKKKKKKKK 62
K + KN +K K K + + KK
Sbjct: 16 KSAMARAKNLEKAKAAGKGSQLEANKKAM 44
>d2oara1 f.16.1.1 (A:10-118) Gated mechanosensitive channel
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 109
Score = 26.3 bits (58), Expect = 3.1
Identities = 4/27 (14%), Positives = 10/27 (37%)
Query: 45 KKKKKKKKKKKKKKKKKKKEEQSVKEI 71
+KK + ++ + + EI
Sbjct: 82 VLPYNTLRKKGEVEQPGDTQVVLLTEI 108
>d1is1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 185
Score = 26.8 bits (59), Expect = 3.2
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 34 KEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEE------QSVKEIEESLKERKEKTLTE 85
++ + N K K K+ + + +K +EE +VK+I+E L KEK L E
Sbjct: 128 VRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAA-KEKELME 184
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 237
Score = 27.0 bits (59), Expect = 3.2
Identities = 12/80 (15%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Query: 8 AGEKKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKK--KKKKKKKKKKKKKKKKEE 65
+ K + + +K+ +++ KK ++ KKK++ K +
Sbjct: 115 SEVKDSLDIEVKQNFIDPLQNLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPD 174
Query: 66 QSVKEIEESLKERKEKTLTE 85
+ +++ E E KE +
Sbjct: 175 EELRQALEKFDESKEIAESS 194
>d2ar0a1 c.66.1.45 (A:6-529) M.EcoKI {Escherichia coli [TaxId: 562]}
Length = 524
Score = 27.2 bits (59), Expect = 3.5
Identities = 8/61 (13%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 18 RNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKK-KKKKKKKEEQSVKEIEESLK 76
R ++ +E + + D+ K+K + + + Q++ E++ ++
Sbjct: 443 RWRKFSREWIRTAKSDSLDISWLKDKDSIDADSLPEPDVLAAEAMGELVQALSELDALMR 502
Query: 77 E 77
E
Sbjct: 503 E 503
>d1uw0a_ g.39.1.12 (A:) DNA ligase III {Human (Homo sapiens) [TaxId:
9606]}
Length = 117
Score = 26.1 bits (57), Expect = 3.7
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 30 EEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKE 64
EE E + E+ K KKK + +
Sbjct: 80 EELEDNEKEQITQHIADLSSKAAGTPKKKAVVQAK 114
Score = 25.7 bits (56), Expect = 4.3
Identities = 10/57 (17%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 13 KRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKK--KKKKKKKKKKKKKKKEEQS 67
+++E+ +K E+ E + E++E+ + ++ + K KKK +
Sbjct: 58 EKLERARATTKKIEDLTELEGWEELEDNEKEQITQHIADLSSKAAGTPKKKAVVQAK 114
>d1zbfa1 c.55.3.1 (A:62-193) BH0863-like Ribonuclease H {Bacillus
halodurans [TaxId: 86665]}
Length = 132
Score = 26.0 bits (57), Expect = 3.9
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 47 KKKKKKKKKKKKKKKKKEEQSVKEIEESLKERK 79
K KK K + ++ + V E EE L
Sbjct: 80 KDKKAKSTLVRNEETALIWKLVDEAEEWLNTHT 112
>d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella
typhimurium [TaxId: 90371]}
Length = 417
Score = 26.8 bits (59), Expect = 4.2
Identities = 5/66 (7%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 51 KKKKKKKKKKKKKEEQSVKEIEESLKERKEKTLTEDSQCDTMIPVFKKGVLYKGIYCPSL 110
++ K+ + + + + ++ R + +Q + P+ + + + ++
Sbjct: 17 RQMKQALRAQIGDVQAVFDRLSATIAARVAEINDLKAQGQPVWPI----IPFSELAMGNI 72
Query: 111 TNSFRE 116
+++ R
Sbjct: 73 SDATRA 78
>d1y5ic1 f.21.3.1 (C:1-225) Respiratory nitrate reductase 1 gamma
chain {Escherichia coli [TaxId: 562]}
Length = 225
Score = 26.7 bits (59), Expect = 4.3
Identities = 14/130 (10%), Positives = 41/130 (31%), Gaps = 14/130 (10%)
Query: 169 LTWTVYTMMSNLAMCLLG-WWRCFANNYLQWAAVGTWILLNTQGWWRCFANNY-LQWAAV 226
+ +Y ++ A+ L+G W R + W A + +L + + V
Sbjct: 7 FFFDIYPYIA-GAVFLIGSWLR-YDYGQYTWRAASSQMLDRKGMNLASNLFHIGILGIFV 64
Query: 227 GTWILLNTQGFISQGIGLNNKEYLIWYILFIVFVTYAMLPLPLKWCFIGGCTTSVLHVII 286
G + + T ++ L + + + + + + G + +
Sbjct: 65 GHFFGMLTPHWM-YEAWLPIEVA---QKMAMFAGGASGV------LCLIGGVLLLKRRLF 114
Query: 287 TAQIKLHRGP 296
+ +++
Sbjct: 115 SPRVRATTTG 124
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 85
Score = 25.1 bits (55), Expect = 4.7
Identities = 4/18 (22%), Positives = 5/18 (27%)
Query: 43 KKKKKKKKKKKKKKKKKK 60
+K KKK
Sbjct: 2 SSGSSGRKPPPKKKMTGT 19
Score = 25.1 bits (55), Expect = 4.7
Identities = 4/18 (22%), Positives = 5/18 (27%)
Query: 44 KKKKKKKKKKKKKKKKKK 61
+K KKK
Sbjct: 2 SSGSSGRKPPPKKKMTGT 19
Score = 25.1 bits (55), Expect = 4.7
Identities = 4/18 (22%), Positives = 5/18 (27%)
Query: 45 KKKKKKKKKKKKKKKKKK 62
+K KKK
Sbjct: 2 SSGSSGRKPPPKKKMTGT 19
Score = 25.1 bits (55), Expect = 4.7
Identities = 4/18 (22%), Positives = 5/18 (27%)
Query: 46 KKKKKKKKKKKKKKKKKK 63
+K KKK
Sbjct: 2 SSGSSGRKPPPKKKMTGT 19
Score = 24.3 bits (53), Expect = 8.8
Identities = 4/18 (22%), Positives = 6/18 (33%)
Query: 41 KNKKKKKKKKKKKKKKKK 58
+ +K KKK
Sbjct: 2 SSGSSGRKPPPKKKMTGT 19
>d1vk1a_ d.268.1.2 (A:) Hypothetical protein PF0380 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 232
Score = 26.5 bits (58), Expect = 4.8
Identities = 8/55 (14%), Positives = 19/55 (34%)
Query: 15 IEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVK 69
+ + E+ E + ++ EE K+ + K + ++ VK
Sbjct: 173 EDAKADMEKGEIDYVFIRKAPTKEEVMELVKRGEVFSPKTTRHVLPFIPDKIDVK 227
>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide
pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId:
2261]}
Length = 279
Score = 26.5 bits (58), Expect = 5.2
Identities = 9/65 (13%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 47 KKKKKKKKKKKKKKKKKEEQSVKEIEESLKERKEKTLTEDSQCDTMIPVFKKG-VLYKGI 105
K K+ K +K+ + E + + K+ + + + P+ + G ++ +
Sbjct: 200 KPIAKRGKLSGRKQVYRCENGHYHVVPANKKLERCPVCNAKVEPLLKPIIENGEIVVE-- 257
Query: 106 YCPSL 110
P
Sbjct: 258 -FPKA 261
>d1v3ya_ d.167.1.1 (A:) Peptide deformylase {Thermus thermophilus
[TaxId: 274]}
Length = 182
Score = 26.3 bits (57), Expect = 5.3
Identities = 4/22 (18%), Positives = 11/22 (50%)
Query: 43 KKKKKKKKKKKKKKKKKKKKKE 64
K K++ + + + + +KE
Sbjct: 160 PKPKREAFLEANRAELVRFQKE 181
Score = 25.5 bits (55), Expect = 8.2
Identities = 3/22 (13%), Positives = 11/22 (50%)
Query: 42 NKKKKKKKKKKKKKKKKKKKKK 63
K K++ + + + + +K+
Sbjct: 160 PKPKREAFLEANRAELVRFQKE 181
Score = 25.5 bits (55), Expect = 9.0
Identities = 3/22 (13%), Positives = 11/22 (50%)
Query: 40 EKNKKKKKKKKKKKKKKKKKKK 61
K K++ + + + + +K+
Sbjct: 160 PKPKREAFLEANRAELVRFQKE 181
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 26.7 bits (58), Expect = 5.3
Identities = 7/49 (14%), Positives = 18/49 (36%)
Query: 33 EKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKERKEK 81
+ + ++K +K+ + + K K + +E L+ E
Sbjct: 710 RYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEA 758
Score = 26.3 bits (57), Expect = 7.1
Identities = 8/51 (15%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Query: 21 EEEKEENEQEEKEKEDVEEEKNKKKKKKKKK-----KKKKKKKKKKKKEEQ 66
+K +++EKE E +E K + ++ ++ E +
Sbjct: 710 RYQKLLKQKQEKETE-LENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEAR 759
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2
{Cow (Bos taurus) [TaxId: 9913]}
Length = 364
Score = 26.6 bits (58), Expect = 5.7
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 22 EEKEENEQEEKEKEDVEEEKNKKKKKKKKKKK 53
E+ + E E + + E ++ + +KK K K
Sbjct: 329 SERWQQEVAETVFDTINAETDRLEARKKTKNK 360
>d1j46a_ a.21.1.1 (A:) SRY {Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 24.8 bits (54), Expect = 5.7
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 30 EEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKK 63
EK E +K + ++K K + ++K K
Sbjct: 49 AEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKM 82
Score = 24.8 bits (54), Expect = 5.9
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 21 EEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKK 58
E EK QE ++ + + EK K + ++K K K
Sbjct: 48 EAEKWPFFQEAQKLQAMHREKYPNYKYRPRRKAKMLPK 85
>d1nu9c2 a.8.6.1 (C:146-281) Staphylocoagulase {Staphylococcus
aureus [TaxId: 1280]}
Length = 136
Score = 25.6 bits (56), Expect = 5.8
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 4/80 (5%)
Query: 9 GEKKKRIEKRNKEEEKEENEQEEKEKED--VEEEKNKKKKKKKKKKKKKKKKKKKKKEEQ 66
G++ K N+ EKE + E ED +E NK K K + E
Sbjct: 52 GDEDKPHRISNERIEKEMIKDLESIIEDFFIETGLNKPDNITSYDSSKHHYKNHSEGFEA 111
Query: 67 SVKEIEESLKERKE--KTLT 84
VKE E++ + KT T
Sbjct: 112 LVKETREAVTNANDSWKTKT 131
>d1hnfa1 b.1.1.1 (A:4-104) CD2, first domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 25.2 bits (55), Expect = 5.8
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 29 QEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEE 65
Q + +D++ EK KKK + +K+K+ K+K +
Sbjct: 22 QMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK 58
>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha
chain {Azotobacter vinelandii [TaxId: 354]}
Length = 477
Score = 26.5 bits (58), Expect = 5.9
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 24 KEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEESLKER 78
+EE E +E +V EK +K + K + KK + K + R
Sbjct: 3 REEVESLIQEVLEVYPEKARKDRNKHLAVNDPAVTQSKKCIISNKKSQPGLMTIR 57
>d1l4sa_ d.204.1.1 (A:) Ribosome binding protein Y (YfiA homologue)
{Escherichia coli [TaxId: 562]}
Length = 112
Score = 25.2 bits (55), Expect = 6.0
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 40 EKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEE 73
K +++ K + K + ++ K+ V+E+EE
Sbjct: 78 NKLERQLNKLQHKGEARRAATSVKDANFVEEVEE 111
>d1kvva_ d.201.1.1 (A:) SRP19 {Archaeon Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 104
Score = 25.1 bits (55), Expect = 6.5
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 29 QEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKE 64
++ K + E +K + +++K+++KK KKKKK+
Sbjct: 69 EKRGTKTKLMIELARKIAEIREQKREQKKDKKKKKK 104
>d2j01v1 b.155.1.1 (V:1-101) Ribosomal protein L21p {Thermus
thermophilus [TaxId: 274]}
Length = 101
Score = 25.2 bits (55), Expect = 6.5
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 37 VEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEE 73
+ + KK K K K + ++KK ++ + I+E
Sbjct: 62 LGHGRGKKILVSKFKAKVQYRRKKGHRQPYTELLIKE 98
>d2qamr1 b.155.1.1 (R:1-103) Ribosomal protein L21p {Escherichia
coli [TaxId: 562]}
Length = 103
Score = 25.1 bits (55), Expect = 6.6
Identities = 7/37 (18%), Positives = 19/37 (51%)
Query: 37 VEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEE 73
V + +K K K +++K +K++ ++ + +I
Sbjct: 64 VAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITG 100
>d1k99a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 91
Score = 24.9 bits (54), Expect = 6.7
Identities = 7/49 (14%), Positives = 21/49 (42%)
Query: 12 KKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKK 60
K +K + EK++ + + + + +E + + ++ + KK
Sbjct: 43 KILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFREDHPDLIQNAKK 91
>d2f5ka1 b.34.13.3 (A:6-88) Mortality factor 4-like protein 1,
MRG15 {Human (Homo sapiens) [TaxId: 9606]}
Length = 83
Score = 24.5 bits (53), Expect = 8.0
Identities = 6/35 (17%), Positives = 18/35 (51%)
Query: 25 EENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKK 59
+E E + + V+ K+++ +K +++ + K
Sbjct: 49 DEWVPESRVLKYVDTNLQKQRELQKANQEQYAEGK 83
>d2nllb_ g.39.1.2 (B:) Thyroid hormone receptor (TR-beta)
DNA-binding domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 24.7 bits (53), Expect = 8.3
Identities = 6/31 (19%), Positives = 16/31 (51%)
Query: 39 EEKNKKKKKKKKKKKKKKKKKKKKKEEQSVK 69
+ K+ K+K ++ ++K++ E+ K
Sbjct: 73 TDLVLDDSKRLAKRKLIEENREKRRREELEK 103
>d1h3za_ b.34.9.2 (A:) Hypothetical protein SPBC215.07c {Fission
yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 108
Score = 25.0 bits (54), Expect = 8.3
Identities = 6/34 (17%), Positives = 12/34 (35%)
Query: 38 EEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEI 71
E ++ +K K K K K + + +
Sbjct: 71 SEAISQFLEKPKPKTASLIKAYKMAQSTPDLDSL 104
Score = 24.6 bits (53), Expect = 9.0
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 40 EKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEE 73
+ +K K K K K QS +++
Sbjct: 70 TSEAISQFLEKPKPKTASLIKAYKMAQSTPDLDS 103
>d2c1ia2 d.341.1.1 (A:46-267) Peptidoglycan GlcNAc deacetylase
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 222
Score = 25.7 bits (56), Expect = 9.3
Identities = 15/89 (16%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 24 KEENEQEEKEKEDVEEEKNKKKKKKKKKKK------KKKKKKKKKKEEQSVKEIEESLKE 77
+++ E +KEK+D E N+K+ ++ + + + +K E +++++ L+
Sbjct: 2 EQKIESLKKEKDDQLSEGNQKEHFRQGQAEVIAYYPLQGEKVISSVRELINQDVKDKLES 61
Query: 78 RKEKTLTEDSQCDTMIPVFKKGVLYKGIY 106
+ Q ++ + + K IY
Sbjct: 62 KDNLVFYYTEQEESGLKGVVNRNVTKQIY 90
>d1ofcx3 a.187.1.1 (X:697-798) HAND domain of the nucleosome
remodeling ATPase ISWI {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 102
Score = 24.4 bits (53), Expect = 9.6
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 11 KKKRIEKRNKEEEKEENEQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKE 70
K R K+ ++ + E D E +K K K + K + + ++
Sbjct: 19 KAPRPPKQPIVQDFQFFPPRLFELLDQEIYYFRKTVGYKVPKNTELGSDATKVQREEQRK 78
Query: 71 IEESL------KERKEKTLTE 85
I+E+ + KE L++
Sbjct: 79 IDEAEPLTEEEIQEKENLLSQ 99
>d1eh1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Thermus
thermophilus [TaxId: 274]}
Length = 185
Score = 25.3 bits (55), Expect = 9.9
Identities = 9/54 (16%), Positives = 25/54 (46%), Gaps = 7/54 (12%)
Query: 36 DVEEEKNKKKKKKKKKKKKKKKKKKKKKEE------QSVKEIEESLKERKEKTL 83
++ E K KK K+ + + K+ + E + + + ++ ++ KE+ +
Sbjct: 131 NIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEK-KEQEI 183
>d1mswd_ e.8.1.3 (D:) T7 RNA polymerase {Bacteriophage T7 [TaxId:
10760]}
Length = 882
Score = 25.9 bits (56), Expect = 10.0
Identities = 11/47 (23%), Positives = 18/47 (38%)
Query: 28 EQEEKEKEDVEEEKNKKKKKKKKKKKKKKKKKKKKKEEQSVKEIEES 74
E E + + E KK +++ K+ KK Q V+ S
Sbjct: 145 EDEARFGRIRDLEAKHFKKNVEEQLNKRVGHVYKKAFMQVVEADMLS 191
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.132 0.400
Gapped
Lambda K H
0.267 0.0614 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,341,138
Number of extensions: 65578
Number of successful extensions: 1597
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1067
Number of HSP's successfully gapped: 285
Length of query: 362
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 276
Effective length of database: 1,226,816
Effective search space: 338601216
Effective search space used: 338601216
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.4 bits)