Query psy17569
Match_columns 197
No_of_seqs 190 out of 1218
Neff 6.3
Searched_HMMs 46136
Date Fri Aug 16 16:54:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17569.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17569hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3619|consensus 100.0 4.9E-42 1.1E-46 330.8 9.6 174 21-197 2-246 (867)
2 KOG4171|consensus 100.0 2.2E-36 4.7E-41 283.7 10.4 135 62-197 385-577 (671)
3 KOG3618|consensus 100.0 4.1E-34 9E-39 269.6 6.4 149 45-193 232-469 (1318)
4 KOG1023|consensus 99.9 4.6E-28 9.9E-33 223.6 8.9 137 53-194 233-429 (484)
5 KOG3619|consensus 99.9 2E-25 4.3E-30 216.1 10.5 142 52-193 578-796 (867)
6 KOG3618|consensus 99.9 1.3E-24 2.8E-29 205.7 -0.2 147 47-193 1011-1225(1318)
7 PF00211 Guanylate_cyc: Adenyl 99.8 9.2E-21 2E-25 152.3 -2.6 96 99-194 19-138 (184)
8 smart00044 CYCc Adenylyl- / gu 99.7 1.1E-18 2.3E-23 142.0 4.1 96 99-194 47-168 (194)
9 COG2114 CyaA Adenylate cyclase 99.7 1.3E-17 2.9E-22 140.5 1.6 92 99-195 57-170 (227)
10 cd07302 CHD cyclase homology d 99.6 1.8E-16 3.9E-21 124.2 3.4 97 99-195 12-134 (177)
11 cd07556 Nucleotidyl_cyc_III Cl 96.7 0.00081 1.8E-08 49.7 1.4 70 119-191 41-122 (133)
12 PF07701 HNOBA: Heme NO bindin 85.4 4.1 8.9E-05 34.4 7.3 45 55-99 167-211 (219)
13 PF06305 DUF1049: Protein of u 63.3 41 0.0009 22.3 7.3 34 38-71 15-50 (68)
14 PF12597 DUF3767: Protein of u 52.1 35 0.00076 26.2 4.8 30 50-82 77-106 (118)
15 PF06295 DUF1043: Protein of u 50.3 90 0.002 24.0 6.9 48 46-93 3-50 (128)
16 COG1798 DPH5 Diphthamide biosy 39.3 19 0.00041 31.4 1.7 67 130-197 77-144 (260)
17 PRK00888 ftsB cell division pr 36.3 1.6E+02 0.0035 21.9 6.2 18 80-97 39-56 (105)
18 PRK11677 hypothetical protein; 32.1 2.5E+02 0.0054 22.0 7.0 53 46-98 7-66 (134)
19 PRK06231 F0F1 ATP synthase sub 28.7 2.2E+02 0.0047 23.7 6.4 10 34-43 39-48 (205)
20 COG3116 FtsL Cell division pro 28.0 2.7E+02 0.0058 21.1 7.2 34 55-88 33-66 (105)
21 PRK10772 cell division protein 26.1 2.9E+02 0.0063 20.9 7.2 34 56-89 36-69 (108)
22 KOG3123|consensus 21.5 75 0.0016 27.4 2.3 66 130-197 77-143 (272)
23 PF04999 FtsL: Cell division p 21.2 3.1E+02 0.0068 19.4 7.5 22 64-85 34-55 (97)
No 1
>KOG3619|consensus
Probab=100.00 E-value=4.9e-42 Score=330.81 Aligned_cols=174 Identities=40% Similarity=0.626 Sum_probs=162.7
Q ss_pred hhhcccCcCCccceeeccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--
Q psy17569 21 QSRISGGVPASRSVFHFGAFCPEFPFFCPVGINSAGMYTKYLTDRGQRRAFLETHRSTETRMKTQKENDQQEKLLLSG-- 98 (197)
Q Consensus 21 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~~nliG~~~~~~~e~~~R~~F~~~~~~i~~~~~l~~e~~k~e~LL~si-- 98 (197)
+..+..+++.++..++.|+.+|.++|+| +|++|+++++++|..+|++|++++++++.+++++.|++++|+||+|+
T Consensus 2 ~~~~~~~~~~~~~~~~~ql~an~~~~~~---~nl~G~~~~~~~e~~~r~~f~~~~~~i~~r~~l~~~~~~qerlllsvlp 78 (867)
T KOG3619|consen 2 HLILAIGFNAQDVLLLNQLLANAVLFLC---INLVGIFTKYMMERAQRQAFLETRKCIEVRMELETEKQQQERLLLSVLP 78 (867)
T ss_pred eeeccCCcCchhHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3455666777888889999999998887 99999999999999999999999999999999999999999999998
Q ss_pred --------------------------------------------hHhhhcCCCccee---------eeeeccccCceEEE
Q psy17569 99 --------------------------------------------FTFTATNMSASCL---------QISKDLQENHCLRI 125 (197)
Q Consensus 99 --------------------------------------------Ft~ls~~~~p~el---------~FD~l~~~~~~~ki 125 (197)
||.++++|+++|+ +||++|++++|.+|
T Consensus 79 ~~va~~m~~~i~~~~~~~~~~~~f~~iy~~~h~nVSIl~adivgft~l~s~~saqelv~~LneLf~rfd~lA~~~~clRi 158 (867)
T KOG3619|consen 79 AHVAMEMKKDIIESSARCKNDNQFHKLYIQRHDNVSILFADIVGFTQLASQCSAQELVKVLNELFARFDRLAAENHCLRI 158 (867)
T ss_pred HHHHHHHHHHHHhhhhcchhhhccchhheeeccchHhhHHHHhhhhhhhcCCCHHHHHHHHHHHHHHHHHHHHhcceEee
Confidence 9999999999998 99999999999999
Q ss_pred EeeCCceeeeeCCCCCCcchhhh--------------hhhccCCceeEEEeEe-CCeeeccccCCCccccccCccccccC
Q psy17569 126 KLLGDCYYCVSGLPKPRADHATL--------------LNYKKKENHCLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDG 190 (197)
Q Consensus 126 ktiGD~Ym~v~Glp~~~~~ha~~--------------~~~~~~~~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As 190 (197)
|.+||||+||+|+|++++|||+| +++.++.+++|||||| |+|.|||+|.+||+|||||++|.+|+
T Consensus 159 KiLGdcyyCvsglp~~~~dHA~~~v~mgl~Mi~aI~~vr~at~~dvnmrvGihsG~Vl~GvlG~~kwq~DVws~dv~lAn 238 (867)
T KOG3619|consen 159 KILGDCYYCVSGLPEARPDHAVCCVEMGLDMIKAIKQVREATGVDVNMRVGIHSGSVLCGVLGLRKWQYDVWSNDVTLAN 238 (867)
T ss_pred eeecceeEEecCCCCCChhHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCceeecccccceeeeeeccchhhhhh
Confidence 99999999999999999999997 7789999999999999 99999999999999999999999999
Q ss_pred CC-CCCCC
Q psy17569 191 HP-AGYEP 197 (197)
Q Consensus 191 ~~-~g~~~ 197 (197)
+| +|..|
T Consensus 239 ~mEs~G~p 246 (867)
T KOG3619|consen 239 HMEAGGVP 246 (867)
T ss_pred hhhhcCCC
Confidence 74 45544
No 2
>KOG4171|consensus
Probab=100.00 E-value=2.2e-36 Score=283.73 Aligned_cols=135 Identities=19% Similarity=0.241 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------------------------------hHhhhcCCCcc
Q psy17569 62 LTDRGQRRAFLETHRSTETRMKTQKENDQQEKLLLSG--------------------------------FTFTATNMSAS 109 (197)
Q Consensus 62 ~~e~~~R~~F~~~~~~i~~~~~l~~e~~k~e~LL~si--------------------------------Ft~ls~~~~p~ 109 (197)
..+...|+.=+ ..++-+...+|+.||+|+++||.++ ||++|+.|+|.
T Consensus 385 q~el~~~lE~~-~~~Le~~~~~Le~EKkkTd~LLy~mlP~~VA~qLr~g~~v~a~~f~~vTilFsdIv~Ft~ic~~ctp~ 463 (671)
T KOG4171|consen 385 QLELNLELEKL-KEKLEKMTRELEEEKKKTDTLLYSMLPRSVAQQLRQGESVDAKEFDDVTILFSDIVGFTAICSQCTPM 463 (671)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHcCCCcCccccCceEEEEeccchHHhHhhccCcH
Confidence 33444444444 4445566678999999999999998 99999999999
Q ss_pred ee---------eeeeccccCceEEEEeeCCceeeeeCCCCCCcchhhh---------------hhhccCCceeEEEeEe-
Q psy17569 110 CL---------QISKDLQENHCLRIKLLGDCYYCVSGLPKPRADHATL---------------LNYKKKENHCLRIKLL- 164 (197)
Q Consensus 110 el---------~FD~l~~~~~~~kiktiGD~Ym~v~Glp~~~~~ha~~---------------~~~~~~~~l~~RIGIh- 164 (197)
++ +||++++.+++|||+||||+||+|+|+|+..+.||++ ....++.++.||||||
T Consensus 464 ~vV~~LN~lyt~fD~~i~~~~VYKVETIGDaYm~vsG~P~~~~~HAe~i~~~AL~Mm~~ak~v~~p~~~~pi~iRiGIHs 543 (671)
T KOG4171|consen 464 QVVNMLNELYTRFDRIIDTHDVYKVETIGDAYMVVSGLPDASDYHAEHIADLALGMMEEAKEVVSPVTGEPIQIRIGIHS 543 (671)
T ss_pred HHHHHHHHHHHHHHHhhcccCeEEEeeccchheeecCCCCCChhHHHHHHHHHHHHHHHhhhhcCcCCCCceEEEEEecc
Confidence 87 9999999999999999999999999999999999995 2234578999999999
Q ss_pred CCeeeccccCCCccccccCccccccCC-CCCCCC
Q psy17569 165 GDCYYCVSGLPKTEWDREKKTDCTDGH-PAGYEP 197 (197)
Q Consensus 165 G~V~aGViG~~k~~ydv~GdtVn~As~-~~g~~~ 197 (197)
|||+|||||.++|||||||||||+||| ++++.|
T Consensus 544 G~VvAGVVG~kmPRYCLFGdTVn~AsrmES~s~p 577 (671)
T KOG4171|consen 544 GPVVAGVVGVKMPRYCLFGDTVNLASRMESSSVP 577 (671)
T ss_pred CCeeeeeecccccceeecCCchhhhhhhhcCCCC
Confidence 999999999999999999999999997 455554
No 3
>KOG3618|consensus
Probab=100.00 E-value=4.1e-34 Score=269.59 Aligned_cols=149 Identities=26% Similarity=0.393 Sum_probs=141.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------------------------
Q psy17569 45 PFFCPVGINSAGMYTKYLTDRGQRRAFLETHRSTETRMKTQKENDQQEKLLLSG-------------------------- 98 (197)
Q Consensus 45 ~~~~~i~~nliG~~~~~~~e~~~R~~F~~~~~~i~~~~~l~~e~~k~e~LL~si-------------------------- 98 (197)
..+.+.|++++|+....|+++.+|.+|++..|.+-.+..||.|++-.|++++|+
T Consensus 232 r~~lH~~vHliGVHlfim~qVR~R~TFlKVGQs~l~rkdLE~EkqlKe~MIhSVMP~kvAD~Llk~g~~pS~nd~~~~~~ 311 (1318)
T KOG3618|consen 232 RGLLHGCVHLIGVHLFIMSQVRSRSTFLKVGQSILHRKDLEVEKQLKERMIHSVMPRKVADDLLKQGDEPSENDVKRHAT 311 (1318)
T ss_pred HHHHhhhhhhhhhHHHHHHHHHhhhhHHHhhHHHHhhhhhHHHHHHHHHHHHhhcChHHHHHHHhhcCCCCcccccCCCC
Confidence 446788899999999999999999999999999999999999999999999998
Q ss_pred ---------------------------------------hHhhhcCCCccee---------eeeeccccCceEEEEeeCC
Q psy17569 99 ---------------------------------------FTFTATNMSASCL---------QISKDLQENHCLRIKLLGD 130 (197)
Q Consensus 99 ---------------------------------------Ft~ls~~~~p~el---------~FD~l~~~~~~~kiktiGD 130 (197)
||+||++.++.++ +||.+|+..|||||.|+||
T Consensus 312 ~s~~~r~~~s~~vk~~~~FRPF~M~~menVSILFADIvGFTkMSsnKsA~~LV~lLNDLFgRFD~LC~l~gcEKISTLGD 391 (1318)
T KOG3618|consen 312 SSPKNRKKKSSIVKAPIAFRPFKMQQMENVSILFADIVGFTKMSSNKSAHALVGLLNDLFGRFDRLCELTGCEKISTLGD 391 (1318)
T ss_pred CCcccccchhhccccccccCchhhhhhhhhhhhhhhhhchhhccccccHHHHHHHHHHHHHHHHHHHHhcCcchhccccc
Confidence 9999999999998 9999999999999999999
Q ss_pred ceeeeeCCCCCCcchhhh--------------hhhccCCceeEEEeEe-CCeeeccccCCCccccccCccccccCCCC
Q psy17569 131 CYYCVSGLPKPRADHATL--------------LNYKKKENHCLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDGHPA 193 (197)
Q Consensus 131 ~Ym~v~Glp~~~~~ha~~--------------~~~~~~~~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As~~~ 193 (197)
||+||+|+|+|+.|||-| +++..++.++||+||| |.|+||++|++++.||||+++||+|+.|+
T Consensus 392 CYYCVaGCPEPraDHA~ccvEMGLgMI~AirqFd~~r~e~VnMRVGvHTGtVlCGivGtrRfKFDVwSNDV~LAN~ME 469 (1318)
T KOG3618|consen 392 CYYCVAGCPEPRADHAYCCVEMGLGMIKAIRQFDQERKEMVNMRVGVHTGTVLCGIVGTRRFKFDVWSNDVNLANLME 469 (1318)
T ss_pred eeeeecCCCCCcccceeeehhhcchHHHHHHHHHHHhhcccceEEEEecceEEeeeeecceEeeeeccCcchHHHHHH
Confidence 999999999999999997 5667788999999999 99999999999999999999999999764
No 4
>KOG1023|consensus
Probab=99.95 E-value=4.6e-28 Score=223.62 Aligned_cols=137 Identities=21% Similarity=0.259 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhc--------------------------------h
Q psy17569 53 NSAGMYTKYLTDRGQRRAFLETHRSTET-RMKTQKENDQQEKLLLSG--------------------------------F 99 (197)
Q Consensus 53 nliG~~~~~~~e~~~R~~F~~~~~~i~~-~~~l~~e~~k~e~LL~si--------------------------------F 99 (197)
|++....+.+.+|..-. .+.++. ..+|++|++|.|.||..+ |
T Consensus 233 nl~D~m~~~le~Y~~nL-----e~~v~eRt~~l~~e~~k~d~LL~~mLP~~VA~~lk~G~~v~pe~~~~vti~fsDiv~f 307 (484)
T KOG1023|consen 233 NLMDSLFRMLESYADNL-----EKLVDERTAELEEEKKKTDTLLGQMLPKSVAESLKLGKTVDPESFDSVTIYFSDIVGF 307 (484)
T ss_pred hhHHHHHHHHHHHHhhh-----HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhHhhcCCcCCccccCceeeeeHHHHHH
Confidence 55555555555555332 233433 467889999999999987 9
Q ss_pred HhhhcCCCccee---------eeeeccccCceEEEEeeCCceeeeeCCCCCCcc-hhhh----------------hhhcc
Q psy17569 100 TFTATNMSASCL---------QISKDLQENHCLRIKLLGDCYYCVSGLPKPRAD-HATL----------------LNYKK 153 (197)
Q Consensus 100 t~ls~~~~p~el---------~FD~l~~~~~~~kiktiGD~Ym~v~Glp~~~~~-ha~~----------------~~~~~ 153 (197)
|.+|++++|.++ .||.+.++|+++|++||||+||++||+|..... |+.- ++...
T Consensus 308 T~l~~~~~P~~vv~~lNdlyt~Fd~ii~~~d~yKVetiGDaYmvvSglp~~n~~~H~~eia~msl~~~~~~~~f~i~H~P 387 (484)
T KOG1023|consen 308 TVLSSNSTPIQVVTLLNDLYTTFDRIIDKHDVYKVETIGDAYMVVSGLPIRNGYRHAREIASMALGLRSFLESFSLPHRP 387 (484)
T ss_pred HHHHhcCCCceeeeeccchHHhhhhcccccCCeeEeccCcceeecccCceecHhHHHHHHHHHHHHHHHHHhccCCCCCC
Confidence 999999999998 999999999999999999999999999998875 6652 33456
Q ss_pred CCceeEEEeEe-CCeeeccccCCCccccccCccccccCCCCC
Q psy17569 154 KENHCLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDGHPAG 194 (197)
Q Consensus 154 ~~~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As~~~g 194 (197)
..++++|||+| |||+|||||.+.|+||+||||||+||||+.
T Consensus 388 ~~~l~iRig~~sg~~~agVvgl~mPRYclFgDtvn~AsrMes 429 (484)
T KOG1023|consen 388 WEKLRLRIGFHSGPVVAGVVGLKMPRYCLFGDTVNTASRMES 429 (484)
T ss_pred chhhheeeccccCCceecccccCCCcccchhhHHHHHhhhhh
Confidence 78899999999 999999999999999999999999999875
No 5
>KOG3619|consensus
Probab=99.92 E-value=2e-25 Score=216.10 Aligned_cols=142 Identities=20% Similarity=0.182 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------------------------
Q psy17569 52 INSAGMYTKYLTDRGQRRAFLETHRSTETRMKTQKENDQQEKLLLSG--------------------------------- 98 (197)
Q Consensus 52 ~nliG~~~~~~~e~~~R~~F~~~~~~i~~~~~l~~e~~k~e~LL~si--------------------------------- 98 (197)
+.+.-.++.+..|+..|..|+...+..+++.+.+..++.++.||.|+
T Consensus 578 f~l~l~~~~Rq~E~~~RlDFLWk~q~~~E~ee~e~m~~~Nr~LLeNiLPaHVA~HFl~~~~r~~eLY~qSy~~VgVMFAS 657 (867)
T KOG3619|consen 578 FLLALLLHARQVEYTARLDFLWKVQAQEEKEEMETMQNLNRLLLENILPSHVAAHFLGSKKRNEELYHQSYDCVGVMFAS 657 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcChHHHHHHHhhcccchHHHHHhhhceEEEEEEe
Confidence 44455667889999999999999999999999999999999999999
Q ss_pred ---hHhhhcCCCcc--ee-----------eeeeccc--c-CceEEEEeeCCceeeeeCCC-CCCcch-h--------hh-
Q psy17569 99 ---FTFTATNMSAS--CL-----------QISKDLQ--E-NHCLRIKLLGDCYYCVSGLP-KPRADH-A--------TL- 148 (197)
Q Consensus 99 ---Ft~ls~~~~p~--el-----------~FD~l~~--~-~~~~kiktiGD~Ym~v~Glp-~~~~~h-a--------~~- 148 (197)
|...=++++.. .+ .||++.+ + .+++||||||.+||||+||- +...++ + -.
T Consensus 658 ipnF~dFYsE~d~NneGlECLRlLNEIIaDFDeLL~~pkF~~IEKIKTIGSTYMAAsGL~~~~~~~~~~~~~~~~h~~~l 737 (867)
T KOG3619|consen 658 IPNFKDFYSECDVNNEGLECLRLLNEIIADFDELLSKPKFSGVEKIKTIGSTYMAASGLNPTSAQENDQSLRQWSHLGAL 737 (867)
T ss_pred cCCcceeeeeecCCcccchHHHHHHHHHhhHHHhcCccccccceeEEEecchhhhhhCCChhhhhccCcchhHHhhHHHH
Confidence 22221122211 11 8999997 3 47999999999999999994 332222 1 11
Q ss_pred -------------hhhccCCceeEEEeEe-CCeeeccccCCCccccccCccccccCCCC
Q psy17569 149 -------------LNYKKKENHCLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDGHPA 193 (197)
Q Consensus 149 -------------~~~~~~~~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As~~~ 193 (197)
.+...-.++.+||||+ |||+|||||.+||+||+||+|||+||||.
T Consensus 738 ~eFAlal~~~L~~IN~~SfNnF~LrIGin~GpvvAGVIGArKPqYDIWGNTVNvASRMd 796 (867)
T KOG3619|consen 738 VEFALALMHKLDEINRHSFNNFELRIGINHGPVVAGVIGARKPQYDIWGNTVNVASRMD 796 (867)
T ss_pred HHHHHHHHHHHHhhhHHhhccceeeeceeccceeeeEecCCCCCccccccchhhhhccc
Confidence 3344457799999999 99999999999999999999999999863
No 6
>KOG3618|consensus
Probab=99.89 E-value=1.3e-24 Score=205.74 Aligned_cols=147 Identities=20% Similarity=0.118 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------hHhhhcCCCccee----
Q psy17569 47 FCPVGINSAGMYTKYLTDRGQRRAFLETHRSTETRMKTQKENDQQEKLLLSG-----------FTFTATNMSASCL---- 111 (197)
Q Consensus 47 ~~~i~~nliG~~~~~~~e~~~R~~F~~~~~~i~~~~~l~~e~~k~e~LL~si-----------Ft~ls~~~~p~el---- 111 (197)
+-++.+.++.+|+.+..|...|..|...-+.-..+..+|..+.|.|.||.|| =+++|++....-+
T Consensus 1011 Ld~~L~lvLVwFLNreFE~~yRl~f~Gdv~A~~d~~riQ~mrdQADwLL~NiIP~HvaE~LK~~~kYSeNH~~~gviFAS 1090 (1318)
T KOG3618|consen 1011 LDFFLLLVLVWFLNREFEVSYRLHFHGDVEADLDRTRIQSMRDQADWLLRNIIPYHVAEQLKVSQKYSENHDSGGVIFAS 1090 (1318)
T ss_pred HHHHHHHHHHHHhhhheeeeEEEEEecchhhchhHHHHHHHHHHHHHHHhccchHHHHHHhhccccccccCccceEEEEE
Confidence 4445567788999999999999999988888888889999999999999999 1223333322111
Q ss_pred ---------------------------eeeeccccC---ceEEEEeeCCceeeeeCCCCC-Ccc--hhh----h------
Q psy17569 112 ---------------------------QISKDLQEN---HCLRIKLLGDCYYCVSGLPKP-RAD--HAT----L------ 148 (197)
Q Consensus 112 ---------------------------~FD~l~~~~---~~~kiktiGD~Ym~v~Glp~~-~~~--ha~----~------ 148 (197)
.||++.++- .+|||||||-+|||+|||... +.| |-+ -
T Consensus 1091 IvNfnemYeEnyeGGkEflRVLNElIGDFDELLsrPdf~~iEKIKTIG~tyMAASGLnp~~~~~~~hp~EHl~~l~eFa~ 1170 (1318)
T KOG3618|consen 1091 IVNFNEMYEENYEGGKEFLRVLNELIGDFDELLSRPDFSSIEKIKTIGATYMAASGLNPAQAQDGSHPQEHLQILFEFAK 1170 (1318)
T ss_pred eccHHHHHHHhhhchHHHHHHHHHHhccHHHHhccccchhhHHHhhhhHHHHHhcCCChHHccCCCChHHHHHHHHHHHH
Confidence 899999765 489999999999999999533 222 222 1
Q ss_pred --------h-hhccCCceeEEEeEe-CCeeeccccCCCccccccCccccccCCCC
Q psy17569 149 --------L-NYKKKENHCLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDGHPA 193 (197)
Q Consensus 149 --------~-~~~~~~~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As~~~ 193 (197)
+ ++....++.+|||.+ |||+|||||+.|.-||+||||||+||||.
T Consensus 1171 amq~Vvd~FN~dlL~Fnf~lrvG~NiGpvTAGVIGTtKLyYDIWGDtVNiASRMd 1225 (1318)
T KOG3618|consen 1171 AMQRVVDDFNNDLLWFNFKLRVGFNIGPVTAGVIGTTKLYYDIWGDTVNIASRMD 1225 (1318)
T ss_pred HHHHHHHHhhhhhhheeeeEEeeccccCccccccccceeeehhhcchhhhhhhcc
Confidence 2 245678899999999 99999999999999999999999999974
No 7
>PF00211 Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain; InterPro: IPR001054 Guanylate cyclases (4.6.1.2 from EC) catalyse the formation of cyclic GMP (cGMP) from GTP. cGMP acts as an intracellular messenger, activating cGMP-dependent kinases and regulating cGMP-sensitive ion channels. The role of cGMP as a second messenger in vascular smooth muscle relaxation and retinal photo-transduction is well established. Guanylate cyclase is found both in the soluble and particulate fractions of eukaryotic cells. The soluble and plasma membrane-bound forms differ in structure, regulation and other properties [, , , ]. Most currently known plasma membrane-bound forms are receptors for small polypeptides. The soluble forms of guanylate cyclase are cytoplasmic heterodimers having alpha and beta subunits. In all characterised eukaryote guanylyl- and adenylyl cyclases, cyclic nucleotide synthesis is carried out by the conserved class III cyclase domain. ; GO: 0016849 phosphorus-oxygen lyase activity, 0009190 cyclic nucleotide biosynthetic process, 0035556 intracellular signal transduction; PDB: 3UVJ_A 1FX4_A 1WC4_B 2BW7_D 1WC1_A 1WC0_A 1WC3_A 1WC5_A 1WC6_A 3ET6_B ....
Probab=99.77 E-value=9.2e-21 Score=152.32 Aligned_cols=96 Identities=24% Similarity=0.297 Sum_probs=82.9
Q ss_pred hHhhhcCCCccee---------eeeeccccCceEEEEeeCCceeeeeCCCCCCcchhhh--------------hhhccCC
Q psy17569 99 FTFTATNMSASCL---------QISKDLQENHCLRIKLLGDCYYCVSGLPKPRADHATL--------------LNYKKKE 155 (197)
Q Consensus 99 Ft~ls~~~~p~el---------~FD~l~~~~~~~kiktiGD~Ym~v~Glp~~~~~ha~~--------------~~~~~~~ 155 (197)
||++++..+|+++ .+|+++++|+++++|++||+|||++|.|.+..+|+.. ++.....
T Consensus 19 ft~l~~~~~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~Gd~~~~~f~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 98 (184)
T PF00211_consen 19 FTDLTEQLDPEELVRLLNDFFSSLDRIVKQHGGEIIKFIGDGVMAVFGLPEPDEDAAERAVQFALALLEALERLNKESGP 98 (184)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEETTEEEEEESSSSCHCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cHHHHHhCCchhHHHHHHHHHHHhhhccccccccccccccceeEEEeccccccccccccccccccchhhcccccccccce
Confidence 8888888888877 8899999999999999999999999999877777663 2223357
Q ss_pred ceeEEEeEe-CCeeeccccCCCccccccCccccccCCCCC
Q psy17569 156 NHCLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDGHPAG 194 (197)
Q Consensus 156 ~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As~~~g 194 (197)
++.+||||| |+|++|++|..+++||+|||+||.|+|++.
T Consensus 99 ~~~~rIGI~~G~v~~g~~G~~~~~~~v~G~~vn~Aarl~~ 138 (184)
T PF00211_consen 99 PLSVRIGIHTGPVVVGVVGSRRPEYDVFGDAVNIAARLES 138 (184)
T ss_dssp S-EEEEEEEEEEEEEEEEESSSEEEEEESHHHHHHHHHHH
T ss_pred eeeeeccccccccccccccCcccceeeeehhhhhhHHHHH
Confidence 899999999 999999999999999999999999998653
No 8
>smart00044 CYCc Adenylyl- / guanylyl cyclase, catalytic domain. Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes.
Probab=99.74 E-value=1.1e-18 Score=142.02 Aligned_cols=96 Identities=22% Similarity=0.320 Sum_probs=83.6
Q ss_pred hHhhhcCCCccee---------eeeeccccCceEEEEeeCCceeeeeCCCCCC-cchhhh--------------hh-hcc
Q psy17569 99 FTFTATNMSASCL---------QISKDLQENHCLRIKLLGDCYYCVSGLPKPR-ADHATL--------------LN-YKK 153 (197)
Q Consensus 99 Ft~ls~~~~p~el---------~FD~l~~~~~~~kiktiGD~Ym~v~Glp~~~-~~ha~~--------------~~-~~~ 153 (197)
||.+++.++|.++ .+++++.+||++.+|++||++||++|.|... .+|+.. ++ ...
T Consensus 47 ~t~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gg~v~~~~Gd~~l~~F~~~~~~~~~~a~~a~~~al~l~~~~~~~~~~~~ 126 (194)
T smart00044 47 FTTLSSEATPEQVVTLLNDLYSRFDRIIDRHGGYKVKTIGDAYMVVSGLPTEALVDHAELAADEALDMVESLKTVLSQHR 126 (194)
T ss_pred hhhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999887 6888889999999999999999999999887 377662 11 123
Q ss_pred CCceeEEEeEe-CCeeeccccCCCccccccCccccccCCCCC
Q psy17569 154 KENHCLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDGHPAG 194 (197)
Q Consensus 154 ~~~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As~~~g 194 (197)
..++++||||| |+|++|.+|..+++||+||++||+|+|++.
T Consensus 127 ~~~l~~riGih~G~v~~~~~g~~~~~~~~~G~~vn~AarL~~ 168 (194)
T smart00044 127 GNGLRVRIGIHTGPVVAGVVGITMPRYCLFGDTVNLASRMES 168 (194)
T ss_pred CCCeeEEEEEeccceEEEecCCCCceeEEeChHHHHHHHHHh
Confidence 67899999999 999999999999999999999999998654
No 9
>COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]
Probab=99.67 E-value=1.3e-17 Score=140.49 Aligned_cols=92 Identities=16% Similarity=0.214 Sum_probs=78.3
Q ss_pred hHhhhcCCCccee---------eeeeccccCceEEEEeeCCceeeeeCCCCCCcchhh-hh-----------hhccCCce
Q psy17569 99 FTFTATNMSASCL---------QISKDLQENHCLRIKLLGDCYYCVSGLPKPRADHAT-LL-----------NYKKKENH 157 (197)
Q Consensus 99 Ft~ls~~~~p~el---------~FD~l~~~~~~~kiktiGD~Ym~v~Glp~~~~~ha~-~~-----------~~~~~~~l 157 (197)
||++++..+|..+ .++..+.+||+..+|++||++|+++|.|.+.+ +|. |. .+...+.+
T Consensus 57 ~T~l~~~~~~~~~~~ll~~~~~~~~~~v~~~gG~v~k~iGD~~la~F~~p~~~~-~A~~~a~~~~~~~~~~~~~~~~~~l 135 (227)
T COG2114 57 STELSESLGDEALVELLNLYFDAVAEVVARHGGRVVKFIGDGFLAVFGRPSPLE-DAVACALDLQLALRNPLARLRRESL 135 (227)
T ss_pred chHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecceEEEEeCCCCCcH-HHHHHHHHHHHHHHHHHhhccCcCe
Confidence 9999999999887 66777789999999999999999999999887 444 41 12223338
Q ss_pred eEEEeEe-CCeeeccccCCCccccccCccccccCCCCCC
Q psy17569 158 CLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDGHPAGY 195 (197)
Q Consensus 158 ~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As~~~g~ 195 (197)
++||||| |+|+.|.+|. ||+|||+||+|+|++.-
T Consensus 136 ~~riGi~~G~vv~~~~g~----~~~~G~~VN~AaRLe~~ 170 (227)
T COG2114 136 RVRIGIHTGEVVVGNTGG----YTVVGSAVNQAARLESL 170 (227)
T ss_pred eEEEEEEeecEEEEeecC----eeEechHhHHHHHHHHh
Confidence 9999999 9999999988 99999999999997654
No 10
>cd07302 CHD cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.
Probab=99.62 E-value=1.8e-16 Score=124.20 Aligned_cols=97 Identities=23% Similarity=0.228 Sum_probs=82.9
Q ss_pred hHhhhcCCCccee---------eeeeccccCceEEEEeeCCceeeeeCCCCCCcchhhh-----------hhh-----cc
Q psy17569 99 FTFTATNMSASCL---------QISKDLQENHCLRIKLLGDCYYCVSGLPKPRADHATL-----------LNY-----KK 153 (197)
Q Consensus 99 Ft~ls~~~~p~el---------~FD~l~~~~~~~kiktiGD~Ym~v~Glp~~~~~ha~~-----------~~~-----~~ 153 (197)
||.+.+..+|+++ .+++++.+++++++++.||++|++++.|.+..+|+.. +++ ..
T Consensus 12 ~t~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~gd~~~~~f~~~~~~~~~~~~A~~~a~~i~~~~~~~~~~~~~ 91 (177)
T cd07302 12 FTALSERLGPEELVELLNEYFSAFDEIIERHGGTVDKTIGDAVMAVFGLPGAHEDHAERAVRAALEMQEALAELNAEREG 91 (177)
T ss_pred hHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCceEEEEeCCCCCchhHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 7777777777776 7888899999999999999999999999887777652 111 14
Q ss_pred CCceeEEEeEe-CCeeeccccCCCccccccCccccccCCCCCC
Q psy17569 154 KENHCLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDGHPAGY 195 (197)
Q Consensus 154 ~~~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As~~~g~ 195 (197)
..++.+||||| |++++|.+|..+++|++||++||+|.|++-.
T Consensus 92 ~~~~~~riGi~~G~~~~g~~g~~~~~~~~~G~~v~~A~rl~~~ 134 (177)
T cd07302 92 GPPLRLRIGIHTGPVVAGVVGSERPEYTVIGDTVNLAARLESL 134 (177)
T ss_pred CCCeEEEEEEecceEEEEecCCCCcceeEecchHhHHHHHHhc
Confidence 67899999999 9999999999999999999999999997644
No 11
>cd07556 Nucleotidyl_cyc_III Class III nucleotidyl cyclases. Class III nucleotidyl cyclases are the largest, most diverse group of nucleotidyl cyclases (NC's) containing prokaryotic and eukaryotic proteins. They can be divided into two major groups; the mononucleotidyl cyclases (MNC's) and the diguanylate cyclases (DGC's). The MNC's, which include the adenylate cyclases (AC's) and the guanylate cyclases (GC's), have a conserved cyclase homology domain (CHD), while the DGC's have a conserved GGDEF domain, named after a conserved motif within this subgroup. Their products, cyclic guanylyl and adenylyl nucleotides, are second messengers that play important roles in eukaryotic signal transduction and prokaryotic sensory pathways.
Probab=96.66 E-value=0.00081 Score=49.70 Aligned_cols=70 Identities=23% Similarity=0.280 Sum_probs=50.5
Q ss_pred cCceEEEEeeCCceeeeeCCCCCCcchhh-h-------hhh---ccCCceeEEEeEe-CCeeeccccCCCccccccCccc
Q psy17569 119 ENHCLRIKLLGDCYYCVSGLPKPRADHAT-L-------LNY---KKKENHCLRIKLL-GDCYYCVSGLPKTEWDREKKTD 186 (197)
Q Consensus 119 ~~~~~kiktiGD~Ym~v~Glp~~~~~ha~-~-------~~~---~~~~~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtV 186 (197)
.++.....+-||.++++..- ...+.+. + +.. .....+.++||+| |++..+..|. ++.++.+|+.+
T Consensus 41 ~~~~~~~r~~~d~f~~l~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ig~~~g~~~~~~~~~-~~~~~~~~~~~ 117 (133)
T cd07556 41 RSGDLKIKTIGDEFMVVSGL--DHPAAAVAFAEDMREAVSALNQSEGNPVRVRIGIHTGPVVVGVIGS-RPQYDVWGALV 117 (133)
T ss_pred HcCcEEEEeecceEEEEECc--hHHHHHHHHHHHHHHHHHHHHhccCCceEEEEEEecccEEEEeccC-CccceEEcHHH
Confidence 33455667789999998642 1112221 1 211 1345789999999 9999999999 99999999999
Q ss_pred cccCC
Q psy17569 187 CTDGH 191 (197)
Q Consensus 187 n~As~ 191 (197)
|.|++
T Consensus 118 ~~a~~ 122 (133)
T cd07556 118 NLASR 122 (133)
T ss_pred HHHHH
Confidence 99876
No 12
>PF07701 HNOBA: Heme NO binding associated; InterPro: IPR011645 The HNOBA (Haem NO Binding) domain is found associated with the HNOB domain and IPR001054 from INTERPRO in soluble cyclases and signalling proteins. The HNOB domain is predicted to function as a haem-dependent sensor for gaseous ligands, and transduce diverse downstream signals in both bacteria and animals.; GO: 0004383 guanylate cyclase activity, 0006182 cGMP biosynthetic process; PDB: 2P04_B 2P08_A 3HLS_E.
Probab=85.41 E-value=4.1 Score=34.43 Aligned_cols=45 Identities=13% Similarity=0.108 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q psy17569 55 AGMYTKYLTDRGQRRAFLETHRSTETRMKTQKENDQQEKLLLSGF 99 (197)
Q Consensus 55 iG~~~~~~~e~~~R~~F~~~~~~i~~~~~l~~e~~k~e~LL~siF 99 (197)
.|.......+...+.......++-+...++++||+++|.||.+++
T Consensus 167 ~~~q~~a~~~l~~~le~~~~~~Le~~~~~l~~ek~ktd~LL~~ml 211 (219)
T PF07701_consen 167 LGQQQSAELKLAKQLEQEKSAELEESMRELEEEKKKTDELLYSML 211 (219)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 455555555556666545555666777899999999999999984
No 13
>PF06305 DUF1049: Protein of unknown function (DUF1049); InterPro: IPR010445 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=63.32 E-value=41 Score=22.33 Aligned_cols=34 Identities=12% Similarity=-0.137 Sum_probs=18.5
Q ss_pred cccCChh--hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17569 38 GAFCPEF--PFFCPVGINSAGMYTKYLTDRGQRRAF 71 (197)
Q Consensus 38 ~~~~~~~--~~~~~i~~nliG~~~~~~~e~~~R~~F 71 (197)
....|.. ++.+++..-++|...........|+.-
T Consensus 15 ~~~~pl~l~il~~f~~G~llg~l~~~~~~~~~r~~~ 50 (68)
T PF06305_consen 15 QFPLPLGLLILIAFLLGALLGWLLSLPSRLRLRRRI 50 (68)
T ss_pred eccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3335533 555566566666666655555555433
No 14
>PF12597 DUF3767: Protein of unknown function (DUF3767); InterPro: IPR022533 This group of proteins includes mitochodrial cytochrome c oxidase proteins [], and some transmembrane domain-containing proteins of unknown function known as FAM36A. Proteins in this family are typically between 112 and 199 amino acids in length.
Probab=52.09 E-value=35 Score=26.16 Aligned_cols=30 Identities=10% Similarity=-0.065 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17569 50 VGINSAGMYTKYLTDRGQRRAFLETHRSTETRM 82 (197)
Q Consensus 50 i~~nliG~~~~~~~e~~~R~~F~~~~~~i~~~~ 82 (197)
+++++.+...+ .+..|..+...++..+...
T Consensus 77 ~l~s~~~we~C---r~~r~~~~~~~~~~~e~~~ 106 (118)
T PF12597_consen 77 FLGSLGSWEYC---RYNRRKERQQMKRAVEAMQ 106 (118)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 33555555444 4455555555555554443
No 15
>PF06295 DUF1043: Protein of unknown function (DUF1043); InterPro: IPR009386 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=50.27 E-value=90 Score=24.00 Aligned_cols=48 Identities=10% Similarity=0.045 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17569 46 FFCPVGINSAGMYTKYLTDRGQRRAFLETHRSTETRMKTQKENDQQEK 93 (197)
Q Consensus 46 ~~~~i~~nliG~~~~~~~e~~~R~~F~~~~~~i~~~~~l~~e~~k~e~ 93 (197)
+++++...++|++..++.....+..=.-..++-+.+.++++-+++.++
T Consensus 3 ~i~lvvG~iiG~~~~r~~~~~~~~q~~l~~eL~~~k~el~~yk~~V~~ 50 (128)
T PF06295_consen 3 IIGLVVGLIIGFLIGRLTSSNQQKQAKLEQELEQAKQELEQYKQEVND 50 (128)
T ss_pred HHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666778888877776655443211123334455556555555443
No 16
>COG1798 DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=39.32 E-value=19 Score=31.41 Aligned_cols=67 Identities=19% Similarity=0.141 Sum_probs=46.3
Q ss_pred CceeeeeCCCCCCcchhhhhhhccCCceeEEEeEe-CCeeeccccCCCccccccCccccccCCCCCCCC
Q psy17569 130 DCYYCVSGLPKPRADHATLLNYKKKENHCLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDGHPAGYEP 197 (197)
Q Consensus 130 D~Ym~v~Glp~~~~~ha~~~~~~~~~~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As~~~g~~~ 197 (197)
|.-+.+.|=|--...|+.-.-+.....+.+|| || -++++.+.|..-.+.-=||.+|.+..-..+|-|
T Consensus 77 ~Vall~~GDpmvATTH~~L~~~A~~~Gi~v~v-Ih~~Si~~Aa~g~tGL~~YkFG~~vTip~~~~~~~p 144 (260)
T COG1798 77 DVALLVAGDPMVATTHVDLRIEAKRRGIEVRV-IHGASIINAAIGLTGLQNYKFGKTVTLPFPSENFFP 144 (260)
T ss_pred CEEEEecCCcceehhHHHHHHHHHHcCCcEEE-EcccHHHHHHhhhhhhheeccCCceEecccccCcCC
Confidence 33344445455556787753333455677886 78 788888888888776679999998877776655
No 17
>PRK00888 ftsB cell division protein FtsB; Reviewed
Probab=36.31 E-value=1.6e+02 Score=21.90 Aligned_cols=18 Identities=11% Similarity=0.246 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy17569 80 TRMKTQKENDQQEKLLLS 97 (197)
Q Consensus 80 ~~~~l~~e~~k~e~LL~s 97 (197)
.+.++++-+++++.|-..
T Consensus 39 ~~~e~~~l~~~n~~L~~e 56 (105)
T PRK00888 39 QQQTNAKLKARNDQLFAE 56 (105)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333444444555555433
No 18
>PRK11677 hypothetical protein; Provisional
Probab=32.12 E-value=2.5e+02 Score=22.03 Aligned_cols=53 Identities=11% Similarity=0.013 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHhhc
Q psy17569 46 FFCPVGINSAGMYTKYLTDRGQRRAFLETHRSTETRMKTQKENDQ-------QEKLLLSG 98 (197)
Q Consensus 46 ~~~~i~~nliG~~~~~~~e~~~R~~F~~~~~~i~~~~~l~~e~~k-------~e~LL~si 98 (197)
+++++...++|++..++.....+..=.-..++-+.+.++++-+++ +-.||.++
T Consensus 7 ~i~livG~iiG~~~~R~~~~~~~~q~~le~eLe~~k~ele~YkqeV~~HFa~TA~Ll~~L 66 (134)
T PRK11677 7 LIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAELEEYRQELVSHFARSAELLDTM 66 (134)
T ss_pred HHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666777766654333222111122333444455544444 34466555
No 19
>PRK06231 F0F1 ATP synthase subunit B; Validated
Probab=28.73 E-value=2.2e+02 Score=23.67 Aligned_cols=10 Identities=10% Similarity=-0.270 Sum_probs=5.0
Q ss_pred eeeccccCCh
Q psy17569 34 VFHFGAFCPE 43 (197)
Q Consensus 34 ~i~~~~~~~~ 43 (197)
.++.+.+.|.
T Consensus 39 ~~~~~~~~~~ 48 (205)
T PRK06231 39 SIINELFPNF 48 (205)
T ss_pred HHHHHhcCcH
Confidence 4555555443
No 20
>COG3116 FtsL Cell division protein [Cell division and chromosome partitioning]
Probab=27.98 E-value=2.7e+02 Score=21.08 Aligned_cols=34 Identities=15% Similarity=-0.015 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17569 55 AGMYTKYLTDRGQRRAFLETHRSTETRMKTQKEN 88 (197)
Q Consensus 55 iG~~~~~~~e~~~R~~F~~~~~~i~~~~~l~~e~ 88 (197)
++...-..+.+..|..|.+..+.+..+.+++.|.
T Consensus 33 lsAi~vv~~tH~tRqL~~e~~~~~~er~~L~~Ew 66 (105)
T COG3116 33 LSAIGVVYTTHHTRQLIAELEQLVLERDALNIEW 66 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHH
Confidence 3344444567778888988888877777666554
No 21
>PRK10772 cell division protein FtsL; Provisional
Probab=26.12 E-value=2.9e+02 Score=20.89 Aligned_cols=34 Identities=18% Similarity=-0.045 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17569 56 GMYTKYLTDRGQRRAFLETHRSTETRMKTQKEND 89 (197)
Q Consensus 56 G~~~~~~~e~~~R~~F~~~~~~i~~~~~l~~e~~ 89 (197)
+.+.-....+..|+.|.+..+...++..|+.|..
T Consensus 36 SAl~VV~~~h~tR~l~~ele~l~~e~~~Le~Ew~ 69 (108)
T PRK10772 36 SAVTVVTTAHHTRLLTAEREQLVLERDALDIEWR 69 (108)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334445577789999888777777766665543
No 22
>KOG3123|consensus
Probab=21.47 E-value=75 Score=27.37 Aligned_cols=66 Identities=15% Similarity=0.100 Sum_probs=45.0
Q ss_pred CceeeeeCCCCCCcchhhhhhhccCCceeEEEeEe-CCeeeccccCCCccccccCccccccCCCCCCCC
Q psy17569 130 DCYYCVSGLPKPRADHATLLNYKKKENHCLRIKLL-GDCYYCVSGLPKTEWDREKKTDCTDGHPAGYEP 197 (197)
Q Consensus 130 D~Ym~v~Glp~~~~~ha~~~~~~~~~~l~~RIGIh-G~V~aGViG~~k~~ydv~GdtVn~As~~~g~~~ 197 (197)
|.-+-|-|=|--...|+.-+-.....++.+|+ || -+++- .+|.--.+--=||.||.+--....|.|
T Consensus 77 dVa~LVVGdPfgATTHsDlvlRAk~~~ipv~v-IHNASimN-avG~CGLqlY~fGetVSiv~ftd~wrP 143 (272)
T KOG3123|consen 77 DVAFLVVGDPFGATTHSDLVLRAKELGIPVEV-IHNASIMN-AVGCCGLQLYNFGETVSIVFFTDNWRP 143 (272)
T ss_pred ceEEEEecCcccccchhhhheehhhcCCCeEE-EechHHHh-hhccceeeeeccCcEEEEEEEccCcCc
Confidence 44455777777778888875444455666775 78 77764 345555453349999999888888877
No 23
>PF04999 FtsL: Cell division protein FtsL; InterPro: IPR007082 In Escherichia coli, nine gene products are known to be essential for assembly of the division septum. One of these, FtsL, is a bitopic membrane protein whose precise function is not understood. It has been proposed that FtsL interacts with the DivIC protein IPR007060 from INTERPRO [], however this interaction may be indirect [].; GO: 0007049 cell cycle, 0016021 integral to membrane
Probab=21.19 E-value=3.1e+02 Score=19.44 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy17569 64 DRGQRRAFLETHRSTETRMKTQ 85 (197)
Q Consensus 64 e~~~R~~F~~~~~~i~~~~~l~ 85 (197)
....|..+.+..+...+..+++
T Consensus 34 ~~~~~~~~~~l~~l~~~~~~l~ 55 (97)
T PF04999_consen 34 RHQSRQLFYELQQLEKEIDQLQ 55 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3345555555444333333333
Done!