BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1757
(348 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193716167|ref|XP_001946745.1| PREDICTED: RNA-binding protein squid-like [Acyrthosiphon pisum]
Length = 290
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/248 (63%), Positives = 190/248 (76%), Gaps = 5/248 (2%)
Query: 5 ANGTA-GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
ANG + GPGR+D++KLFVGGL R EKE+ +YF+QYGE+E+I+IK DP++GQSRGFAFV
Sbjct: 7 ANGRSNGPGRDDDKKLFVGGLGRTISEKELREYFTQYGEIENINIKTDPFSGQSRGFAFV 66
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+ K VDDLLAAGDH+I NKK+DPKRVTK+VNPL+CKIFVGGLTTE+TEQDVR+YF Q
Sbjct: 67 QFVNAKTVDDLLAAGDHFIANKKVDPKRVTKKVNPLRCKIFVGGLTTEMTEQDVRNYFVQ 126
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
+G I+E+QQPFDK KN KKGFCFI+F+D V +QVLKNPKQVI GKEVDVK+VKFNPETM
Sbjct: 127 FGQISEYQQPFDKMKNQKKGFCFITFEDSEVVNQVLKNPKQVINGKEVDVKKVKFNPETM 186
Query: 184 GSVSGAVRG-AGARVSSAGAAYAAAP--GRVVAYPSTYAGYAAADYGYTAGSYDAYATAY 240
+ G GA A A + P +A + AADYGY A +YDAY AY
Sbjct: 187 TAPGTRTGGPVGATRGGAPATFGLRPAYAGYMAPAAAAPYGTAADYGYAANAYDAYG-AY 245
Query: 241 PGYDYSAM 248
GYDYSA+
Sbjct: 246 GGYDYSAI 253
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 39/62 (62%), Gaps = 12/62 (19%)
Query: 297 NYGYTAGSYDAYATAYPGYDYSAMGYAYPA----------PATSYGGGKYREAAAYPRHA 346
+YGY A +YDAY AY GYDYSA+GY PA +YGGGKYRE YPRHA
Sbjct: 231 DYGYAANAYDAYG-AYGGYDYSAIGYGGGGGGGGGGGGGYPAQAYGGGKYRE-TTYPRHA 288
Query: 347 PY 348
PY
Sbjct: 289 PY 290
>gi|156548706|ref|XP_001603011.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 310
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 162/270 (60%), Gaps = 23/270 (8%)
Query: 4 RANGTAG-PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAF 62
+ TAG PG++DERKLFVGGL RNT E E+ YF ++GE+ES+SIK DPYTG SRGFAF
Sbjct: 59 KQQATAGIPGKDDERKLFVGGLTRNTTEAELKAYFGKFGEIESVSIKMDPYTGVSRGFAF 118
Query: 63 VTYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFS 122
+ + KA+D LLA+GDHY+ +K+DPKRV+K+ KIFVGGLT +IT++D++ YF
Sbjct: 119 MVFQNPKAIDKLLASGDHYVNKRKVDPKRVSKKAQ--HGKIFVGGLTPDITDEDIKTYFG 176
Query: 123 QYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPET 182
QYG+I E Q PFDK+KN ++ +CF++FD ++V ++LK PKQVI GKE+DVK+VK N +
Sbjct: 177 QYGTIVEVQAPFDKTKNQRRSYCFVTFDSKDVVYKLLKTPKQVINGKEIDVKKVKVNQDQ 236
Query: 183 MGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYAT-AYP 241
G G + Y + Y GY D YA Y
Sbjct: 237 RQGFWGP-------QYGGYGYGGGYGGYIPEYANGYGGYD-----------DMYANYDYS 278
Query: 242 GYD-YSAMGYAYPAPAVQTMDTPLVVMMHM 270
GYD Y MGYA P P H
Sbjct: 279 GYDGYENMGYAMPGKPRNGPQGPRQFQRHQ 308
>gi|328789356|ref|XP_001121454.2| PREDICTED: RNA-binding protein squid-like [Apis mellifera]
Length = 314
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/247 (53%), Positives = 163/247 (65%), Gaps = 23/247 (9%)
Query: 8 TAG-PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
TAG PG++DERKLFVGGL RNT +KE+ D+FS++GE+ESIS+K DPYTG SRGFAF+ +T
Sbjct: 49 TAGIPGKDDERKLFVGGLSRNTTDKELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFT 108
Query: 67 TQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
K +D LLA+G+HYI +K+DPKRV+K+ P KIFVGGLT EIT++D++ YF QYG+
Sbjct: 109 NPKTIDKLLASGEHYINKRKVDPKRVSKK--PQHGKIFVGGLTPEITDEDIKTYFGQYGT 166
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
I E Q PFDK KN +KGFCFI+FD + V ++LK PKQ I GKEVDVK+VK NP+
Sbjct: 167 IVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP---- 222
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYAT-AYPGYD- 244
R G G Y G + Y + GY G D YA Y GYD
Sbjct: 223 ----RNQGFWSPGYGYGYGGGYGYIPEYCN----------GYQGGYDDMYANYDYAGYDG 268
Query: 245 YSAMGYA 251
Y MGY
Sbjct: 269 YDNMGYG 275
>gi|322783285|gb|EFZ10869.1| hypothetical protein SINV_13887 [Solenopsis invicta]
Length = 298
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/175 (62%), Positives = 140/175 (80%), Gaps = 3/175 (1%)
Query: 8 TAG-PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
TAG PG++DERKLF+GGL RNT +KE+ D+F ++GE+ESIS+K DP+TG SRGFAF+ +T
Sbjct: 55 TAGIPGKDDERKLFIGGLSRNTTDKELRDHFGKFGEIESISVKVDPHTGVSRGFAFMVFT 114
Query: 67 TQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
K +D LLA+G+HYI +K+DPKRV+K+ P KIFVGGLT EIT+ D++ YFSQYG+
Sbjct: 115 NPKTIDKLLASGEHYINKRKVDPKRVSKK--PQHGKIFVGGLTPEITDDDIKSYFSQYGT 172
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
I E Q PFDK KN +KGFCFI+FD + V ++LK PKQ I GKEVDVK+VK NP+
Sbjct: 173 IVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPD 227
>gi|307206491|gb|EFN84517.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 311
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/251 (52%), Positives = 165/251 (65%), Gaps = 25/251 (9%)
Query: 8 TAG-PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
TAG PG++DERKLFVGGL RNT +KE+ ++FS++GE+ESI++K DP+TG SRGFAF+ +
Sbjct: 67 TAGIPGKDDERKLFVGGLSRNTTDKELREHFSKFGEIESITVKIDPHTGISRGFAFMVFA 126
Query: 67 TQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
KA+D LLA+G+HYI +K+DPKRV+K+ P KIFVGGLT EIT+ D++ YF QYG+
Sbjct: 127 NAKAIDKLLASGEHYINKRKVDPKRVSKK--PQHGKIFVGGLTPEITDDDIKTYFGQYGT 184
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
I E Q PFDK KN +KGFCFI+FD + V ++LK PKQ I GKEVDVK+VK NP+
Sbjct: 185 IVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP---- 240
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYAT-AYPGYD- 244
R G G Y G + Y + Y GY D YA Y GYD
Sbjct: 241 ----RSQGFWAPGYGYGYGGGYGYIPDY-NGYHGYE-----------DMYANYDYAGYDG 284
Query: 245 YSAMGYAYPAP 255
Y MGYA P P
Sbjct: 285 YDNMGYAQPKP 295
>gi|380026397|ref|XP_003696938.1| PREDICTED: RNA-binding protein squid-like [Apis florea]
Length = 314
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 141/175 (80%), Gaps = 3/175 (1%)
Query: 8 TAG-PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
TAG PG++DERKLFVGGL RNT +KE+ D+FS++GE+ESIS+K DPYTG SRGFAF+ +T
Sbjct: 49 TAGIPGKDDERKLFVGGLSRNTTDKELRDHFSKFGEIESISVKIDPYTGISRGFAFMVFT 108
Query: 67 TQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
K +D LLA+G+HYI +K+DPKRV+K+ P KIFVGGLT EIT++D++ YF QYG+
Sbjct: 109 NPKTIDKLLASGEHYINKRKVDPKRVSKK--PQHGKIFVGGLTPEITDEDIKTYFGQYGT 166
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
I E Q P+DK KN +KGFCFI+FD + V ++LK PKQ I GKEVDVK+VK NP+
Sbjct: 167 IVELQAPYDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPD 221
>gi|332016239|gb|EGI57152.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 291
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/175 (61%), Positives = 141/175 (80%), Gaps = 3/175 (1%)
Query: 8 TAG-PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
TAG PG++DERKLF+GGL RNT +KE+ D+F ++GE+ESIS+K DP+TG SRGFAF+ +T
Sbjct: 48 TAGIPGKDDERKLFIGGLSRNTTDKELRDHFGKFGEIESISVKVDPHTGISRGFAFMVFT 107
Query: 67 TQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
K +D LLA+G+HYI +K+DPKRV+K+ P KIFVGGLT EI++ D+++YFSQYG+
Sbjct: 108 NPKTIDKLLASGEHYINKRKVDPKRVSKK--PQHGKIFVGGLTPEISDDDIKNYFSQYGT 165
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
I E Q PFDK KN +KGFCFI+FD + V ++LK PKQ I GKEVDVK+VK NP+
Sbjct: 166 IVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPD 220
>gi|157110306|ref|XP_001651044.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878768|gb|EAT42993.1| AAEL005515-PB [Aedes aegypti]
Length = 292
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 129/171 (75%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T +KE+ ++F QYGE+ESI++K DP TG+SRGFAF+ Y + ++D
Sbjct: 32 RDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSID 91
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
++AAGDH I NKK+DPK+ R KIFVGGLTTEI++++++ +F Q+G+I E +
Sbjct: 92 KVVAAGDHVINNKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEM 147
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK KN +KGFCFI+FD + V +++LK PKQ I GKEVDVK+ P+ M
Sbjct: 148 PFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPDNM 198
>gi|157110296|ref|XP_001651039.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110300|ref|XP_001651041.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878763|gb|EAT42988.1| AAEL005515-PG [Aedes aegypti]
gi|108878765|gb|EAT42990.1| AAEL005515-PC [Aedes aegypti]
Length = 300
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 129/171 (75%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T +KE+ ++F QYGE+ESI++K DP TG+SRGFAF+ Y + ++D
Sbjct: 32 RDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSID 91
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
++AAGDH I NKK+DPK+ R KIFVGGLTTEI++++++ +F Q+G+I E +
Sbjct: 92 KVVAAGDHVINNKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEM 147
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK KN +KGFCFI+FD + V +++LK PKQ I GKEVDVK+ P+ M
Sbjct: 148 PFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPDNM 198
>gi|157110304|ref|XP_001651043.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878767|gb|EAT42992.1| AAEL005515-PE [Aedes aegypti]
Length = 285
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 129/171 (75%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T +KE+ ++F QYGE+ESI++K DP TG+SRGFAF+ Y + ++D
Sbjct: 32 RDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSID 91
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
++AAGDH I NKK+DPK+ R KIFVGGLTTEI++++++ +F Q+G+I E +
Sbjct: 92 KVVAAGDHVINNKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEM 147
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK KN +KGFCFI+FD + V +++LK PKQ I GKEVDVK+ P+ M
Sbjct: 148 PFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPDNM 198
>gi|157110294|ref|XP_001651038.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878762|gb|EAT42987.1| AAEL005515-PF [Aedes aegypti]
Length = 325
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 129/171 (75%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T +KE+ ++F QYGE+ESI++K DP TG+SRGFAF+ Y + ++D
Sbjct: 32 RDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSID 91
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
++AAGDH I NKK+DPK+ R KIFVGGLTTEI++++++ +F Q+G+I E +
Sbjct: 92 KVVAAGDHVINNKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEM 147
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK KN +KGFCFI+FD + V +++LK PKQ I GKEVDVK+ P+ M
Sbjct: 148 PFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPDNM 198
>gi|195036936|ref|XP_001989924.1| GH19060 [Drosophila grimshawi]
gi|193894120|gb|EDV92986.1| GH19060 [Drosophila grimshawi]
Length = 349
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 130/182 (71%), Gaps = 4/182 (2%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S A AG R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFA
Sbjct: 44 SENAGAVAGNQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFA 103
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYF 121
F+ +T +A+D + AA +H I +KK+DPK+ R KIFVGGLTTEI++++++ YF
Sbjct: 104 FIVFTNTEAIDQVSAAEEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYF 159
Query: 122 SQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
SQ+G+I E + PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 160 SQFGTIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 219
Query: 182 TM 183
Sbjct: 220 NQ 221
>gi|270001992|gb|EEZ98439.1| hypothetical protein TcasGA2_TC000928 [Tribolium castaneum]
Length = 344
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 130/171 (76%), Gaps = 4/171 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
PGR+D+RKLFVGGL T +KE+ D+F QYGE+ESI++K DP TG+SRGFAF+ + +A
Sbjct: 53 PGRDDDRKLFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEA 112
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+D ++AAG+H I NKK+DPK+ R KIFVGGLT E+++ D++++FSQYG+I E
Sbjct: 113 IDKVVAAGEHIINNKKVDPKKAKAR----HGKIFVGGLTNELSDDDIKNFFSQYGTIIEV 168
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ PFDK+KN +KGFCFI+F+ + V +++LK PKQ I KEVDVK+ P+
Sbjct: 169 EMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIKDKEVDVKKATPKPD 219
>gi|242025582|ref|XP_002433203.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518744|gb|EEB20465.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 272
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 141/194 (72%), Gaps = 6/194 (3%)
Query: 1 MSYR---ANGTAG-PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQ 56
M YR + GTAG G++D++KLFVGGL + GEKE+N+ FS++G +ESI+IK DP T
Sbjct: 1 MDYRNGPSKGTAGIRGKDDDKKLFVGGLPKLCGEKELNETFSKFGTIESINIKKDPITKV 60
Query: 57 SRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQD 116
RGF F+ ++ VD +L++GD + KK+DP+RVTK P KIF+GGLTT+ TE+
Sbjct: 61 PRGFCFIVFSDPNVVDQILSSGDICVNGKKVDPRRVTKTTPP--GKIFIGGLTTDFTEEK 118
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
++++FSQYG IT+ Q PFD+ KN K+ +CF++F++++ ++LK PKQ + GKE+DVK+V
Sbjct: 119 IKEHFSQYGKITDVQWPFDRQKNQKRAYCFLTFENRDTVTELLKTPKQEVLGKELDVKKV 178
Query: 177 KFNPETMGSVSGAV 190
K NPETM GA+
Sbjct: 179 KLNPETMWQHGGAI 192
>gi|91076876|ref|XP_976197.1| PREDICTED: similar to Bmsqd-2 isoform 3 [Tribolium castaneum]
Length = 323
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 130/171 (76%), Gaps = 4/171 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
PGR+D+RKLFVGGL T +KE+ D+F QYGE+ESI++K DP TG+SRGFAF+ + +A
Sbjct: 53 PGRDDDRKLFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEA 112
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+D ++AAG+H I NKK+DPK+ R KIFVGGLT E+++ D++++FSQYG+I E
Sbjct: 113 IDKVVAAGEHIINNKKVDPKKAKAR----HGKIFVGGLTNELSDDDIKNFFSQYGTIIEV 168
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ PFDK+KN +KGFCFI+F+ + V +++LK PKQ I KEVDVK+ P+
Sbjct: 169 EMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIKDKEVDVKKATPKPD 219
>gi|157110298|ref|XP_001651040.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110302|ref|XP_001651042.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878764|gb|EAT42989.1| AAEL005515-PD [Aedes aegypti]
gi|108878766|gb|EAT42991.1| AAEL005515-PA [Aedes aegypti]
Length = 280
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 129/171 (75%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T +KE+ ++F QYGE+ESI++K DP TG+SRGFAF+ Y + ++D
Sbjct: 32 RDDDRKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSID 91
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
++AAGDH I NKK+DPK+ R KIFVGGLTTEI++++++ +F Q+G+I E +
Sbjct: 92 KVVAAGDHVINNKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTFFGQFGNIVEVEM 147
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK KN +KGFCFI+FD + V +++LK PKQ I GKEVDVK+ P+ M
Sbjct: 148 PFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPDNM 198
>gi|357602467|gb|EHJ63411.1| squid protein-like proteinue [Danaus plexippus]
Length = 288
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 131/176 (74%), Gaps = 4/176 (2%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
N PGR+D+RKLFVGGL T +KE+ ++FS YGE+ESI++K DP TG+SRGFAF+ +
Sbjct: 31 NSADAPGRDDDRKLFVGGLSWETTDKELREHFSAYGEIESINVKTDPNTGRSRGFAFIVF 90
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
++D ++AAGDH I NKK+DPK+ R KIFVGGL++EI++ +++++FS +G
Sbjct: 91 KAPDSIDKVMAAGDHTINNKKVDPKKAKAR----HGKIFVGGLSSEISDDEIKNFFSNFG 146
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+I E + PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GKEVDVKR P+
Sbjct: 147 NIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIAGKEVDVKRATPKPD 202
>gi|312373340|gb|EFR21099.1| hypothetical protein AND_17568 [Anopheles darlingi]
Length = 808
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 126/169 (74%), Gaps = 4/169 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T +KE+ ++F YG++ESI++K DP TG+SRGFAF+ Y +++D
Sbjct: 49 RDDDRKLFVGGLSWETTDKELKEHFGTYGDIESINVKTDPVTGRSRGFAFIVYKQAESID 108
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
++AAGDH I NKK+DPK+ R KIFVGGLTTEI++ +++ +F Q+G+I E +
Sbjct: 109 KVVAAGDHIINNKKVDPKKAKAR----HGKIFVGGLTTEISDDEIKTFFGQFGTIVEVEM 164
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
PFDK KN +KGFCFI++D V +++LK PKQ ICGKEVDVK+ P+
Sbjct: 165 PFDKQKNQRKGFCFITYDSVQVVNELLKTPKQTICGKEVDVKKATPKPD 213
>gi|307173016|gb|EFN64158.1| RNA-binding protein squid [Camponotus floridanus]
Length = 288
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 126/250 (50%), Positives = 165/250 (66%), Gaps = 23/250 (9%)
Query: 8 TAG-PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
TAG PG++DERKLFVGGL R+T +KE++++FS++GE+ESIS+K DP+TG SRGFAF+ +
Sbjct: 44 TAGIPGKDDERKLFVGGLSRSTTDKELHEHFSKFGEIESISVKVDPHTGVSRGFAFMVFA 103
Query: 67 TQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
K +D LLA+G+HYI +K+DPKRV+K+ P K+FVGGLT EIT++D++ +F QYG+
Sbjct: 104 NPKTIDKLLASGEHYINKRKVDPKRVSKK--PQHGKVFVGGLTPEITDEDIKTHFGQYGT 161
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
I E Q PFDK KN +KGFCFI+FD + V ++LK PKQ I GKEVDVK+VK NP+
Sbjct: 162 IVELQAPFDKVKNQRKGFCFITFDSKEVVYKLLKTPKQTINGKEVDVKKVKVNPDP---- 217
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYD-Y 245
R G G Y +P Y GY + Y +YD Y GYD Y
Sbjct: 218 ----RNQGFWAPGYGYGYGGG----YYFPD-YNGYHSGGYDDMYTNYD-----YAGYDGY 263
Query: 246 SAMGYAYPAP 255
MGY P P
Sbjct: 264 DNMGYG-PKP 272
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 126/171 (73%), Gaps = 4/171 (2%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
GR+D+RKLFVGGL T EKE+ D+F QYGE++SI++K DP TG+SRGFAF+ Y + ++
Sbjct: 35 GRDDDRKLFVGGLSWETTEKELRDHFGQYGEIDSINVKTDPTTGRSRGFAFIVYKSADSI 94
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
D ++AAGDH I NKK+DPK+ R KIFVGGL EI++ ++R YF+Q+G+I E +
Sbjct: 95 DKVVAAGDHIINNKKVDPKKAKART----GKIFVGGLIPEISDDEIRAYFAQFGNIVEME 150
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPET 182
PFDK KN +K FCFI+FD + V +++LK PKQ I GKEVDVK+ P+
Sbjct: 151 MPFDKQKNQRKAFCFITFDSETVVNELLKTPKQTISGKEVDVKKATPKPDN 201
>gi|170051646|ref|XP_001861859.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167872815|gb|EDS36198.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 308
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 130/176 (73%), Gaps = 4/176 (2%)
Query: 7 GTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
G + P R+D+RKLFVGGL T +KE+ ++F QYG++ESI++K DP TG+SRGFAF+ Y
Sbjct: 30 GDSAPVRDDDRKLFVGGLSWETSDKELKEHFGQYGDIESINVKTDPNTGRSRGFAFIVYK 89
Query: 67 TQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+ ++D ++AAGDH I NKK+DPK+ R KIFVGGLTTEI++ +++ +F Q+G+
Sbjct: 90 SADSIDKVVAAGDHVINNKKVDPKKAKAR----HGKIFVGGLTTEISDDEIKTFFGQFGN 145
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPET 182
I + + PFDK KN +KGFCFI+FD + V +++LK PKQ I GKEVDVK+ P+
Sbjct: 146 IVDVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPDN 201
>gi|390178414|ref|XP_001359012.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859439|gb|EAL28155.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 310
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 127/171 (74%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T EKE+ D+F ++GE+ESI++K DP TG+SRGFAF+ +T +A+D
Sbjct: 51 RDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAID 110
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ +AG+H I +KK+DPK+ R KIFVGGLTTEI++++++ YFSQ+G+I E +
Sbjct: 111 KVSSAGEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEM 166
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 167 PFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPENQ 217
>gi|390178412|ref|XP_003736644.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859438|gb|EIM52717.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 319
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 127/171 (74%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T EKE+ D+F ++GE+ESI++K DP TG+SRGFAF+ +T +A+D
Sbjct: 51 RDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAID 110
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ +AG+H I +KK+DPK+ R KIFVGGLTTEI++++++ YFSQ+G+I E +
Sbjct: 111 KVSSAGEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEM 166
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 167 PFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPENQ 217
>gi|194741284|ref|XP_001953119.1| GF17370 [Drosophila ananassae]
gi|190626178|gb|EDV41702.1| GF17370 [Drosophila ananassae]
Length = 343
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 131/182 (71%), Gaps = 5/182 (2%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G +G R+D+RKLFVGGL T EKE+ D+F ++GE+ESI++K DP TG+SRGFA
Sbjct: 43 SENQSGASGQ-RDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFA 101
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYF 121
F+ +TT +A+D + AA +H I +KK+DPK+ R KIFVGGLTTEIT+++++ YF
Sbjct: 102 FIVFTTTEAIDKVSAAEEHIINSKKVDPKKAKAR----HGKIFVGGLTTEITDEEIKTYF 157
Query: 122 SQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
Q+G+I E + PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 158 GQFGNIVEVEMPFDKQKSQRKGFCFITFDAEQVVTDLLKTPKQKIAGKEVDVKRATPKPE 217
Query: 182 TM 183
Sbjct: 218 NQ 219
>gi|269063722|emb|CAS85146.1| squid, variant G [Blattella germanica]
Length = 274
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 128/171 (74%), Gaps = 4/171 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
PGR+D+RKLFVGGL T +KE+ D+F YGE+ESI++K DP TG+SRGFAF+ ++ +
Sbjct: 53 PGRDDDRKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS 112
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+D +L+AGDH I NKK+DPK+ R KIFVGGL ++++ D++ +F+QYG+I E
Sbjct: 113 IDKVLSAGDHVINNKKVDPKKAKAR----HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEV 168
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ PFDK+KN +KGFCFI+F+ + V ++LK+PKQ I GKEVDVK+ P+
Sbjct: 169 EMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
>gi|269063720|emb|CAS85145.1| squid, variant F [Blattella germanica]
Length = 297
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 128/171 (74%), Gaps = 4/171 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
PGR+D+RKLFVGGL T +KE+ D+F YGE+ESI++K DP TG+SRGFAF+ ++ +
Sbjct: 53 PGRDDDRKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS 112
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+D +L+AGDH I NKK+DPK+ R KIFVGGL ++++ D++ +F+QYG+I E
Sbjct: 113 IDKVLSAGDHVINNKKVDPKKAKAR----HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEV 168
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ PFDK+KN +KGFCFI+F+ + V ++LK+PKQ I GKEVDVK+ P+
Sbjct: 169 EMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
>gi|269063718|emb|CAS85144.1| squid, variant E [Blattella germanica]
Length = 321
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 128/171 (74%), Gaps = 4/171 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
PGR+D+RKLFVGGL T +KE+ D+F YGE+ESI++K DP TG+SRGFAF+ ++ +
Sbjct: 53 PGRDDDRKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS 112
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+D +L+AGDH I NKK+DPK+ R KIFVGGL ++++ D++ +F+QYG+I E
Sbjct: 113 IDKVLSAGDHVINNKKVDPKKAKAR----HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEV 168
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ PFDK+KN +KGFCFI+F+ + V ++LK+PKQ I GKEVDVK+ P+
Sbjct: 169 EMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
>gi|195390397|ref|XP_002053855.1| GJ23113 [Drosophila virilis]
gi|194151941|gb|EDW67375.1| GJ23113 [Drosophila virilis]
Length = 343
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 94/175 (53%), Positives = 128/175 (73%), Gaps = 4/175 (2%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
AG R+D+RKLFVGGL T EKE+ D+F ++GE+ESI++K DP TG+SRGFAF+ +T
Sbjct: 49 AGNQRDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNT 108
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+A++ + AA +H I +KK+DPK+ R KIFVGGLTTEI++++++ YFSQ+G+I
Sbjct: 109 EAIEQVSAAEEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFSQFGNIV 164
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
E + PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 165 EVEMPFDKQKSHRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPENQ 219
>gi|195113435|ref|XP_002001273.1| GI10695 [Drosophila mojavensis]
gi|193917867|gb|EDW16734.1| GI10695 [Drosophila mojavensis]
Length = 342
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 126/171 (73%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T EKE+ D+F ++GE+ESI++K DP TG+SRGFAF+ +T +A+D
Sbjct: 53 RDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAID 112
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ AA +H I +KK+DPK+ R KIFVGGLTTEI++++++ YFSQ+G+I E +
Sbjct: 113 QVSAAEEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEM 168
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 169 PFDKQKSHRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPENQ 219
>gi|269063716|emb|CAS85143.1| squid, variant D [Blattella germanica]
Length = 294
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 128/171 (74%), Gaps = 4/171 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
PGR+D+RKLFVGGL T +KE+ D+F YGE+ESI++K DP TG+SRGFAF+ ++ +
Sbjct: 53 PGRDDDRKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS 112
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+D +L+AGDH I NKK+DPK+ R KIFVGGL ++++ D++ +F+QYG+I E
Sbjct: 113 IDKVLSAGDHVINNKKVDPKKAKAR----HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEV 168
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ PFDK+KN +KGFCFI+F+ + V ++LK+PKQ I GKEVDVK+ P+
Sbjct: 169 EMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
>gi|269063714|emb|CAS85142.1| squid, variant C [Blattella germanica]
Length = 318
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 128/171 (74%), Gaps = 4/171 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
PGR+D+RKLFVGGL T +KE+ D+F YGE+ESI++K DP TG+SRGFAF+ ++ +
Sbjct: 53 PGRDDDRKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS 112
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+D +L+AGDH I NKK+DPK+ R KIFVGGL ++++ D++ +F+QYG+I E
Sbjct: 113 IDKVLSAGDHVINNKKVDPKKAKAR----HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEV 168
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ PFDK+KN +KGFCFI+F+ + V ++LK+PKQ I GKEVDVK+ P+
Sbjct: 169 EMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
>gi|269063712|emb|CAS85141.1| squid, variant B [Blattella germanica]
Length = 317
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 128/171 (74%), Gaps = 4/171 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
PGR+D+RKLFVGGL T +KE+ D+F YGE+ESI++K DP TG+SRGFAF+ ++ +
Sbjct: 53 PGRDDDRKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS 112
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+D +L+AGDH I NKK+DPK+ R KIFVGGL ++++ D++ +F+QYG+I E
Sbjct: 113 IDKVLSAGDHVINNKKVDPKKAKAR----HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEV 168
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ PFDK+KN +KGFCFI+F+ + V ++LK+PKQ I GKEVDVK+ P+
Sbjct: 169 EMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
>gi|269063710|emb|CAS85140.1| squid, variant A [Blattella germanica]
Length = 341
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 128/171 (74%), Gaps = 4/171 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
PGR+D+RKLFVGGL T +KE+ D+F YGE+ESI++K DP TG+SRGFAF+ ++ +
Sbjct: 53 PGRDDDRKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADS 112
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+D +L+AGDH I NKK+DPK+ R KIFVGGL ++++ D++ +F+QYG+I E
Sbjct: 113 IDKVLSAGDHVINNKKVDPKKAKAR----HGKIFVGGLVPDLSDDDIKSFFAQYGTIVEV 168
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ PFDK+KN +KGFCFI+F+ + V ++LK+PKQ I GKEVDVK+ P+
Sbjct: 169 EMPFDKTKNQRKGFCFITFESEQVVQELLKSPKQSINGKEVDVKKATPKPD 219
>gi|11040|emb|CAA44504.1| hrp40.2 [Drosophila melanogaster]
Length = 345
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 129/179 (72%), Gaps = 5/179 (2%)
Query: 6 NGTAGPG-RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
N +A G R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFAF+
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIV 103
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
+T +A+D + AA +H I +KK+DPK+ R KIFVGGLTTEI++++++ YF Q+
Sbjct: 104 FTNTEAIDKVSAADEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFGQF 159
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
G+I E + PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 160 GNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQ 218
>gi|24646607|ref|NP_731825.1| squid, isoform B [Drosophila melanogaster]
gi|55584092|sp|Q08473.3|SQD_DROME RecName: Full=RNA-binding protein squid; AltName:
Full=Heterogeneous nuclear ribonucleoprotein 40;
Short=HNRNP 40
gi|23171184|gb|AAF54963.2| squid, isoform B [Drosophila melanogaster]
Length = 344
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 129/179 (72%), Gaps = 5/179 (2%)
Query: 6 NGTAGPG-RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
N +A G R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFAF+
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIV 103
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
+T +A+D + AA +H I +KK+DPK+ R KIFVGGLTTEI++++++ YF Q+
Sbjct: 104 FTNTEAIDKVSAADEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFGQF 159
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
G+I E + PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 160 GNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQ 218
>gi|24646605|ref|NP_652209.1| squid, isoform C [Drosophila melanogaster]
gi|386765705|ref|NP_001247088.1| squid, isoform E [Drosophila melanogaster]
gi|23171183|gb|AAN13570.1| squid, isoform C [Drosophila melanogaster]
gi|73853364|gb|AAZ86753.1| LD29474p [Drosophila melanogaster]
gi|220951946|gb|ACL88516.1| sqd-PC [synthetic construct]
gi|383292688|gb|AFH06406.1| squid, isoform E [Drosophila melanogaster]
Length = 308
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 129/179 (72%), Gaps = 5/179 (2%)
Query: 6 NGTAGPG-RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
N +A G R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFAF+
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIV 103
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
+T +A+D + AA +H I +KK+DPK+ R KIFVGGLTTEI++++++ YF Q+
Sbjct: 104 FTNTEAIDKVSAADEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFGQF 159
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
G+I E + PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 160 GNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQ 218
>gi|24646609|ref|NP_731826.1| squid, isoform A [Drosophila melanogaster]
gi|11038|emb|CAA44503.1| hrp40.1 [Drosophila melanogaster]
gi|21428420|gb|AAM49870.1| LD09691p [Drosophila melanogaster]
gi|23171185|gb|AAF54964.2| squid, isoform A [Drosophila melanogaster]
gi|220943526|gb|ACL84306.1| sqd-PA [synthetic construct]
gi|220953540|gb|ACL89313.1| sqd-PA [synthetic construct]
Length = 321
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 129/179 (72%), Gaps = 5/179 (2%)
Query: 6 NGTAGPG-RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
N +A G R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFAF+
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIV 103
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
+T +A+D + AA +H I +KK+DPK+ R KIFVGGLTTEI++++++ YF Q+
Sbjct: 104 FTNTEAIDKVSAADEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFGQF 159
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
G+I E + PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 160 GNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQ 218
>gi|194901408|ref|XP_001980244.1| GG17035 [Drosophila erecta]
gi|190651947|gb|EDV49202.1| GG17035 [Drosophila erecta]
Length = 345
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 125/171 (73%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFAF+ +T +A+D
Sbjct: 52 RDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAID 111
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ AA +H I +KK+DPK+ R KIFVGGLTTEI++++++ YF Q+G+I E +
Sbjct: 112 KVSAADEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEM 167
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 168 PFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQ 218
>gi|347963746|ref|XP_003436985.1| AGAP000399-PB [Anopheles gambiae str. PEST]
gi|333467054|gb|EGK96461.1| AGAP000399-PB [Anopheles gambiae str. PEST]
Length = 371
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 127/170 (74%), Gaps = 4/170 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T +KE+ ++FSQYG++ESI++K DP TG+SRGFAF+ Y + ++D
Sbjct: 99 RDDDRKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSID 158
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
++A +H I NKK+DPK+ R KIFVGGLT+EI++++++ +F Q+G+I E +
Sbjct: 159 KVVAVSEHVINNKKVDPKKAKARY----GKIFVGGLTSEISDEEIKTFFGQFGNIVEVEM 214
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPET 182
PFDK KN +KGFCFI+FD + V +++LK PKQ I GKEVDVK+ PE
Sbjct: 215 PFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPEN 264
>gi|195500849|ref|XP_002097550.1| GE24428 [Drosophila yakuba]
gi|194183651|gb|EDW97262.1| GE24428 [Drosophila yakuba]
Length = 345
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 124/171 (72%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFAF+ +T +A+D
Sbjct: 52 RDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAID 111
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ A +H I +KK+DPK+ R KIFVGGLTTEIT+++++ YF Q+G+I E +
Sbjct: 112 KVSAVDEHIINSKKVDPKKAKAR----HGKIFVGGLTTEITDEEIKTYFGQFGNIVEVEM 167
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 168 PFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQ 218
>gi|347963748|ref|XP_310701.5| AGAP000399-PA [Anopheles gambiae str. PEST]
gi|333467053|gb|EAA06653.5| AGAP000399-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 127/170 (74%), Gaps = 4/170 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T +KE+ ++FSQYG++ESI++K DP TG+SRGFAF+ Y + ++D
Sbjct: 99 RDDDRKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSID 158
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
++A +H I NKK+DPK+ R KIFVGGLT+EI++++++ +F Q+G+I E +
Sbjct: 159 KVVAVSEHVINNKKVDPKKAKARY----GKIFVGGLTSEISDEEIKTFFGQFGNIVEVEM 214
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPET 182
PFDK KN +KGFCFI+FD + V +++LK PKQ I GKEVDVK+ PE
Sbjct: 215 PFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPEN 264
>gi|385455|gb|AAB26989.1| SqdB [Drosophila melanogaster]
Length = 308
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 128/179 (71%), Gaps = 5/179 (2%)
Query: 6 NGTAGPG-RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
N +A G R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFAF+
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIV 103
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
+T +A+D + AA +H I +KK+DPK+ R KIFVGGLTTEI++++++ YF Q+
Sbjct: 104 FTNTEAIDKVSAADEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFGQF 159
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
G+I E + P DK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 160 GNIVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQ 218
>gi|385454|gb|AAB26988.1| SqdA [Drosophila melanogaster]
Length = 321
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 128/179 (71%), Gaps = 5/179 (2%)
Query: 6 NGTAGPG-RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
N +A G R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFAF+
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIV 103
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
+T +A+D + AA +H I +KK+DPK+ R KIFVGGLTTEI++++++ YF Q+
Sbjct: 104 FTNTEAIDKVSAADEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFGQF 159
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
G+I E + P DK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 160 GNIVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQ 218
>gi|195451832|ref|XP_002073095.1| GK13337 [Drosophila willistoni]
gi|194169180|gb|EDW84081.1| GK13337 [Drosophila willistoni]
Length = 353
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 125/169 (73%), Gaps = 4/169 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T EKE+ D+F ++G+++SI++K DP TG+SRGFAF+ +T +A+D
Sbjct: 62 RDDDRKLFVGGLSWETTEKELRDHFGKFGDIDSINVKTDPQTGRSRGFAFIVFTNTEAID 121
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ +A +H I KK+DPK+ R KIFVGGLTTEI+++++R YFSQ+G+I E +
Sbjct: 122 KVSSAEEHVINGKKVDPKKAKAR----HGKIFVGGLTTEISDEEIRTYFSQFGTIVEVEM 177
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 178 PFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKISGKEVDVKRATPKPE 226
>gi|195329216|ref|XP_002031307.1| GM25920 [Drosophila sechellia]
gi|194120250|gb|EDW42293.1| GM25920 [Drosophila sechellia]
Length = 345
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 128/179 (71%), Gaps = 5/179 (2%)
Query: 6 NGTAGPG-RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
N +A G R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFAF+
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIV 103
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
+T +A++ + A +H I +KK+DPK+ R KIFVGGLTTEI++++++ YF Q+
Sbjct: 104 FTNTEAIEKVSAVEEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFGQF 159
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
G+I E + PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 160 GNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQ 218
>gi|110758129|ref|XP_392465.3| PREDICTED: RNA-binding protein squid-like isoform 1 [Apis
mellifera]
Length = 358
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 128/172 (74%), Gaps = 5/172 (2%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R+ G ND RKLFVGGL T +KE+ D+F YG++ESI++K DP TG+SRGFAF+
Sbjct: 42 RSTGGNQDSLND-RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFI 100
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+ +++D ++AAGDH I NKK+DPK+ R KIFVGGL+TE+++ D++++FSQ
Sbjct: 101 VFAKAESLDKIMAAGDHVINNKKVDPKKAKAR----HGKIFVGGLSTELSDDDIKNFFSQ 156
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+G+I E + PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GKEVDVK+
Sbjct: 157 FGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKK 208
>gi|1465873|dbj|BAA07211.1| Bmsqd-2 [Bombyx mori]
Length = 303
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 129/176 (73%), Gaps = 4/176 (2%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
N PGR+D+RKLFVGGL T +KE+ D+F Y E+ESI++K P TG+SRGFAF+ +
Sbjct: 32 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVF 91
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+++D ++AAG+H I NKK+DPK+ R KIFVGGL++EI++ ++R++FS++G
Sbjct: 92 KAPESIDKVMAAGEHTINNKKVDPKKAKAR----HGKIFVGGLSSEISDDEIRNFFSEFG 147
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+I E + PFDK+KN +KGFCFI+F+ + V + +LK PK+ I GKEVDVKR P+
Sbjct: 148 TILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 203
>gi|112983696|ref|NP_001037323.1| squid protein homologue [Bombyx mori]
gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori]
Length = 287
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 129/176 (73%), Gaps = 4/176 (2%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
N PGR+D+RKLFVGGL T +KE+ D+F Y E+ESI++K P TG+SRGFAF+ +
Sbjct: 32 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYREIESINVKTVPNTGRSRGFAFIVF 91
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+++D ++AAG+H I NKK+DPK+ R KIFVGGL++EI++ ++R++FS++G
Sbjct: 92 KAPESIDKVMAAGEHTINNKKVDPKKAKAR----HGKIFVGGLSSEISDDEIRNFFSEFG 147
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+I E + PFDK+KN +KGFCFI+F+ + V + +LK PK+ I GKEVDVKR P+
Sbjct: 148 TILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 203
>gi|158296283|ref|XP_001237856.2| AGAP006668-PA [Anopheles gambiae str. PEST]
gi|157016437|gb|EAU76642.2| AGAP006668-PA [Anopheles gambiae str. PEST]
Length = 360
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 126/169 (74%), Gaps = 4/169 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+DERKLFVGGL T EK++ ++F QYGE+ESI++K DP TG+SRGFAF+ Y ++D
Sbjct: 64 RDDERKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKASDSID 123
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
++AAG+H + NKK+DPKR R KIFVGGLT++I++++++ +F Q+G+I E +
Sbjct: 124 KVVAAGEHVLNNKKVDPKRAKAR----PGKIFVGGLTSDISDEEIKTFFGQFGTIVEVEL 179
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
PFDK KN +KGFCFI+++ V +++LK PKQ I GKEVDVK+ P+
Sbjct: 180 PFDKQKNQRKGFCFITYESVQVVNELLKTPKQTIAGKEVDVKKATPKPD 228
>gi|332028567|gb|EGI68604.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 316
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 128/169 (75%), Gaps = 4/169 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
++RKLFVGGL T +KE+ ++FS YG++ESI++K DP TG+SRGFAF+ + +++D +
Sbjct: 42 EDRKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 101
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
++AGDH I NKK+DPK+ R KIFVGGL+TE+++ D++++FSQ+G+I E + PF
Sbjct: 102 MSAGDHVINNKKVDPKKAKAR----HGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPF 157
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
DK+KN +KGFCFI+F+ + V +++LK KQ I GKEVDVK+ P+ M
Sbjct: 158 DKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKATPKPDGM 206
>gi|307180208|gb|EFN68241.1| RNA-binding protein squid [Camponotus floridanus]
Length = 296
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 126/166 (75%), Gaps = 4/166 (2%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G ++RKLFVGGL T +KE+ ++FS YG++ESI++K DP TG+SRGFAF+ + +
Sbjct: 42 GQDSQEDRKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAE 101
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A+D +++AGDH I NKK+DPK+ R KIFVGGL+TE+++ D++++FSQ+G+I E
Sbjct: 102 ALDKIMSAGDHVINNKKVDPKKAKAR----HGKIFVGGLSTELSDDDIKNFFSQFGNIVE 157
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GK VDVK+
Sbjct: 158 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTISGKAVDVKK 203
>gi|322792842|gb|EFZ16675.1| hypothetical protein SINV_08972 [Solenopsis invicta]
Length = 335
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 130/172 (75%), Gaps = 4/172 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
++RKLFVGGL T +KE+ ++FS YG++ESI++K DP TG+SRGFAF+ + +++D +
Sbjct: 54 NDRKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 113
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
++AGDH I NKK+DPK+ R KIFVGGL+TE+++ D++++FSQ+G+I E + PF
Sbjct: 114 MSAGDHVINNKKVDPKKAKAR----HGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPF 169
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
DK+KN +KGFCFI+F+ + V +++LK KQ I GKEVDVK+ P+ M S+
Sbjct: 170 DKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKATPKPDGMISM 221
>gi|350396366|ref|XP_003484530.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
impatiens]
Length = 362
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 127/172 (73%), Gaps = 5/172 (2%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R+ G ND RKLFVGGL T +KE+ D+F YG++ESI++K DP TG+SRGFAF+
Sbjct: 42 RSTGGNQDSLND-RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFI 100
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+ +++D ++AAGDH I NKK+DPK+ R K+FVGGL+TE+++ D++ +FSQ
Sbjct: 101 VFAKAESLDKIMAAGDHIINNKKVDPKKAKAR----HGKVFVGGLSTELSDDDIKHFFSQ 156
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+G+I E + PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GKEVDVK+
Sbjct: 157 FGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKK 208
>gi|340729952|ref|XP_003403257.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
terrestris]
Length = 362
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 127/172 (73%), Gaps = 5/172 (2%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R+ G ND RKLFVGGL T +KE+ D+F YG++ESI++K DP TG+SRGFAF+
Sbjct: 42 RSTGGNQDSLND-RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFI 100
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+ +++D ++AAGDH I NKK+DPK+ R K+FVGGL+TE+++ D++ +FSQ
Sbjct: 101 VFAKAESLDKIMAAGDHIINNKKVDPKKAKAR----HGKVFVGGLSTELSDDDIKHFFSQ 156
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+G+I E + PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GKEVDVK+
Sbjct: 157 FGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKK 208
>gi|350396363|ref|XP_003484529.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
impatiens]
Length = 314
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 129/178 (72%), Gaps = 5/178 (2%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R+ G ND RKLFVGGL T +KE+ D+F YG++ESI++K DP TG+SRGFAF+
Sbjct: 42 RSTGGNQDSLND-RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFI 100
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+ +++D ++AAGDH I NKK+DPK+ R K+FVGGL+TE+++ D++ +FSQ
Sbjct: 101 VFAKAESLDKIMAAGDHIINNKKVDPKKAKAR----HGKVFVGGLSTELSDDDIKHFFSQ 156
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+G+I E + PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GKEVDVK+ P+
Sbjct: 157 FGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKATPKPD 214
>gi|340729954|ref|XP_003403258.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
terrestris]
Length = 314
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 129/178 (72%), Gaps = 5/178 (2%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R+ G ND RKLFVGGL T +KE+ D+F YG++ESI++K DP TG+SRGFAF+
Sbjct: 42 RSTGGNQDSLND-RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFI 100
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+ +++D ++AAGDH I NKK+DPK+ R K+FVGGL+TE+++ D++ +FSQ
Sbjct: 101 VFAKAESLDKIMAAGDHIINNKKVDPKKAKAR----HGKVFVGGLSTELSDDDIKHFFSQ 156
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+G+I E + PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GKEVDVK+ P+
Sbjct: 157 FGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKKATPKPD 214
>gi|322786135|gb|EFZ12742.1| hypothetical protein SINV_01194 [Solenopsis invicta]
Length = 330
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 126/166 (75%), Gaps = 4/166 (2%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G ++RKLFVGGL T +KE+ ++FS YG++ESI++K DP TG+SRGFAF+ + +
Sbjct: 37 GQDSQEDRKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAE 96
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A+D +++AGDH I NKK+DPK+ R KIFVGGL+TE+++ D++++FSQ+G+I E
Sbjct: 97 ALDKIMSAGDHVINNKKVDPKKAKAR----HGKIFVGGLSTELSDDDIKNFFSQFGNIVE 152
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GK VDVK+
Sbjct: 153 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKAVDVKK 198
>gi|307193268|gb|EFN76159.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 334
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 127/167 (76%), Gaps = 4/167 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
++RKLFVGGL T +KE+ ++FS YG++ESI++K DP TG+SRGFAF+ + +++D +
Sbjct: 72 NDRKLFVGGLSWETTDKELREHFSSYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 131
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
+AAGDH I NKK+DPK+ R KIFVGGL+TE+++ D++++FSQ+G+I E + PF
Sbjct: 132 MAAGDHVINNKKVDPKKAKAR----HGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPF 187
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
DK+KN +KGFCFI+F+ + V +++LK KQ I GKEVDVK+ P+
Sbjct: 188 DKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKATPKPD 234
>gi|332027282|gb|EGI67366.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 306
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 126/166 (75%), Gaps = 4/166 (2%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G ++RKLFVGGL T +KE+ ++FS YG++ESI++K DP TG+SRGFAF+ + +
Sbjct: 40 GQDSQEDRKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAE 99
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A+D +++AGDH I NKK+DPK+ R KIFVGGL+TE+++ D++++FSQ+G+I E
Sbjct: 100 ALDKIMSAGDHVINNKKVDPKKAKAR----HGKIFVGGLSTELSDDDIKNFFSQFGNIVE 155
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GK VDVK+
Sbjct: 156 VEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKAVDVKK 201
>gi|307178992|gb|EFN67508.1| RNA-binding protein squid [Camponotus floridanus]
Length = 327
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 129/172 (75%), Gaps = 4/172 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
++RKLFVGGL T +KE+ ++FS YG++ESI++K DP TG+SRGFAF+ + +++D +
Sbjct: 44 EDRKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 103
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
+ AGDH I NKK+DPK+ R KIFVGGL+TE+++ D++++FSQ+G+I E + PF
Sbjct: 104 MGAGDHVINNKKVDPKKAKAR----HGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPF 159
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
DK+KN +KGFCFI+F+ + V +++LK KQ I GKEVDVK+ P+ M S+
Sbjct: 160 DKTKNQRKGFCFITFESEQVVNELLKTSKQTINGKEVDVKKATPKPDGMISM 211
>gi|157108578|ref|XP_001650293.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108879258|gb|EAT43483.1| AAEL005049-PA [Aedes aegypti]
Length = 287
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 131/179 (73%), Gaps = 6/179 (3%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
+NG PGR+D+RKLFVGGL + T E+++ ++F QYGE+ES+++K DP TG+SRGFAF+
Sbjct: 17 SNGN--PGRDDDRKLFVGGLSKETTEQDLRNHFGQYGEIESVNVKTDPQTGRSRGFAFII 74
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
+ + +++D ++A DH + KK+DPK+ R + KIFVGGL+ E ++++V+ +F Q+
Sbjct: 75 FNSPESIDKVVAFEDHTVNGKKVDPKKAKAR----QGKIFVGGLSPETSDEEVKTFFEQF 130
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
G++ E + PFDK KN +KGFCFI++D + V ++LK PKQ + GKEVDVKR PE M
Sbjct: 131 GNVVEMEMPFDKMKNQRKGFCFITYDSEAVVTELLKTPKQTVGGKEVDVKRATPKPEGM 189
>gi|242024531|ref|XP_002432681.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518151|gb|EEB19943.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 295
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 125/175 (71%), Gaps = 6/175 (3%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
NGT ND+RKLFVG L T +KE+ ++FSQ+GE+ES+S+K DP +G+SRGFAF+ +
Sbjct: 22 NGTTESTNNDDRKLFVGRLSWETTDKELREHFSQFGEIESVSVKTDPASGRSRGFAFIVF 81
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
++++ ++AAGDH I KKIDPK+ R KIFVGGL E +E+D+R++F Q+G
Sbjct: 82 KDVESIEKVMAAGDHIINCKKIDPKKAKAR----HGKIFVGGLDVETSEEDIRNFFGQFG 137
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNP 180
+I E + PFDK KN +K FCFI+F+ + V + +LK PKQ I GKEVDVK+ NP
Sbjct: 138 TILEVELPFDKQKNQQKNFCFITFESEQVTNDLLKQPKQTINGKEVDVKKA--NP 190
>gi|307211208|gb|EFN87408.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 331
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 124/161 (77%), Gaps = 4/161 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
++RKLFVGGL T +KE+ D+F+ YG++ESI++K DP TG+SRGFAF+ + +A+D +
Sbjct: 46 EDRKLFVGGLSWETTDKELRDHFNTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKI 105
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
++AGDH I NKK+DPK+ R KIFVGGL+TE+++ D++ +FSQ+G+I E + PF
Sbjct: 106 MSAGDHVINNKKVDPKKAKAR----HGKIFVGGLSTELSDDDIKHFFSQFGNIVEVEMPF 161
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK+KN +KGFCFI+F+ + V +++LK PKQ I GK VDVK+
Sbjct: 162 DKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKAVDVKK 202
>gi|255710315|gb|ACU30977.1| RNA-binding protein musashi [Ochlerotatus triseriatus]
Length = 270
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 130/181 (71%), Gaps = 4/181 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL + T E+++ ++F QYGE+ES++IK DP TG+SRGFAF+ + + +++D
Sbjct: 1 RDDDRKLFVGGLSKETAEQDLRNHFGQYGEIESVNIKTDPQTGRSRGFAFIIFKSPESID 60
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
++A DH I KK+DPK+ R + K FVGGL+ E ++++++ +F QYG++ E +
Sbjct: 61 KVVAFEDHTINGKKVDPKKAKAR----QGKTFVGGLSPETSDEEIKTFFEQYGNVVEMET 116
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRG 192
PFDK KN +KGFCFI++D + V ++LK PKQ++ GKEVDVKR P+ G +RG
Sbjct: 117 PFDKMKNQRKGFCFITYDSEAVVTELLKTPKQMVGGKEVDVKRATAKPDMQMGGYGPMRG 176
Query: 193 A 193
+
Sbjct: 177 S 177
>gi|156554677|ref|XP_001600539.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 338
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 125/167 (74%), Gaps = 4/167 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
++RKLFVGGL T +KE+ D+FS +G++ESI++K DP TG+SRGFAF+ + +++D
Sbjct: 54 NDRKLFVGGLSWETTDKELRDHFSTFGDIESINVKTDPTTGRSRGFAFIVFAKAESLDKA 113
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
+A GDH I NKK+DPK+ R KIFVGGL+TE+++ D++ +FSQ+G+I + + PF
Sbjct: 114 MAHGDHIINNKKVDPKKAKAR----HGKIFVGGLSTELSDDDIKTFFSQFGTIVDVEMPF 169
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
DK+KN +KGFCFI+F+ + VA+++LK KQ I GKEV+VK+ PE
Sbjct: 170 DKTKNQRKGFCFITFESEQVANELLKTSKQTISGKEVEVKKATPRPE 216
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 127/172 (73%), Gaps = 5/172 (2%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R+ G ND RKLFVGGL T +KE+ D+F YG++ESI++K DP TG+SRGFAF+
Sbjct: 42 RSTGGNQDSLND-RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFI 100
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+ +++D +++A DH I KK+DPK+ R KIFVGGL+TE++++D++++FSQ
Sbjct: 101 VFAKAESLDKIMSANDHIINGKKVDPKKAKAR----HGKIFVGGLSTELSDEDIKNFFSQ 156
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+G+I + + PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GKEVDVK+
Sbjct: 157 FGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKK 208
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 127/172 (73%), Gaps = 5/172 (2%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R+ G ND RKLFVGGL T +KE+ D+F YG++ESI++K DP TG+SRGFAF+
Sbjct: 42 RSTGGNQDSLND-RKLFVGGLSWETTDKELRDHFGTYGDIESINVKTDPNTGRSRGFAFI 100
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+ +++D +++A DH I KK+DPK+ R KIFVGGL+TE++++D++++FSQ
Sbjct: 101 VFAKAESLDKIMSANDHIINGKKVDPKKAKAR----HGKIFVGGLSTELSDEDIKNFFSQ 156
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+G+I + + PFDK+KN +KGFCFI+F+ + V +++LK PKQ I GKEVDVK+
Sbjct: 157 FGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTINGKEVDVKK 208
>gi|289739923|gb|ADD18709.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 295
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 121/171 (70%), Gaps = 4/171 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T EKE+ ++FS++GE+ESI++K D TG+SRGFAF+ +T A++
Sbjct: 45 RDDDRKLFVGGLSWETSEKELREHFSKFGEIESINVKTDSQTGRSRGFAFIVFTGPTAIE 104
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ G+H I NKK+DPK+ R KIFVGGLT EI++ +++ YF Q+G+I E +
Sbjct: 105 KVNEHGEHVINNKKVDPKKAKAR----HGKIFVGGLTNEISDDEIKTYFGQFGNIVEVEM 160
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
PFDK K+ +K FCFI+FD + V ++LK PKQ I GKEVDVKR P+
Sbjct: 161 PFDKQKSQRKAFCFITFDSEQVVSELLKTPKQKISGKEVDVKRATPKPDNQ 211
>gi|195144350|ref|XP_002013159.1| GL23974 [Drosophila persimilis]
gi|194102102|gb|EDW24145.1| GL23974 [Drosophila persimilis]
Length = 341
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 125/179 (69%), Gaps = 6/179 (3%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T EKE+ D+F ++GE+ESI++K DP TG+SRGFAF+ +T +A+D
Sbjct: 51 RDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAID 110
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ +AG+H I +KK+DPK+ R KIFVGGLTTEI++++++ YFSQ+G+I E +
Sbjct: 111 KVSSAGEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIQTYFSQFGNIVEVEM 166
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPET--MGSVSGA 189
PFDK K+ + FCFI+ D + V +LK Q I KEVDVKR PE MG GA
Sbjct: 167 PFDKQKSQRTDFCFITLDSEQVVTDLLKTSIQKISVKEVDVKRATPKPENQMMGMRWGA 225
>gi|332374124|gb|AEE62203.1| unknown [Dendroctonus ponderosae]
Length = 290
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 122/171 (71%), Gaps = 4/171 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
PG++D+RKLFVGGL T +KE+ +YF +YGE+ESI++K D TG+SRGFAF+ + +
Sbjct: 44 PGKDDDRKLFVGGLSWETTDKELREYFGKYGEIESINVKTDSMTGRSRGFAFIVFQDAAS 103
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+D + AAG+H I KK+DPK+ R KIFVGG++ E+++ D+ +YF QYG+I E
Sbjct: 104 IDRVSAAGEHTINGKKVDPKKAKAR----HGKIFVGGISPELSDDDINEYFGQYGTIMEV 159
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ PFDK KN +KGFCFI+F+ + V +LK PKQVI KEVDVK+ P+
Sbjct: 160 EMPFDKQKNQRKGFCFITFESEQVVADLLKRPKQVIKDKEVDVKKATPKPD 210
>gi|195571113|ref|XP_002103548.1| GD20486 [Drosophila simulans]
gi|194199475|gb|EDX13051.1| GD20486 [Drosophila simulans]
Length = 345
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 125/179 (69%), Gaps = 5/179 (2%)
Query: 6 NGTAGPG-RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
N +A G R+D+RKLFVGGL T EKE+ D+F +YGE+ESI++K DP TG+SRGFAF+
Sbjct: 44 NQSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIV 103
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
+T +A++ + A +H I +KK+D + R KIFVG LTTEI++++++ YF Q+
Sbjct: 104 FTNTEAIEKVSAVEEHIINSKKVDLPKAKAR----HGKIFVGFLTTEISDEEIKTYFGQF 159
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
G+I E + PFDK K+ +KGFCFI+FD + V +LK PKQ I GKEVDVKR PE
Sbjct: 160 GNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQ 218
>gi|321459101|gb|EFX70158.1| hypothetical protein DAPPUDRAFT_189289 [Daphnia pulex]
Length = 334
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 124/173 (71%), Gaps = 4/173 (2%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G++++RKLFVGGL T +KE+ ++F +YGE+ESI++K DP TG+SRGFAF+ + + + +
Sbjct: 63 GKDEDRKLFVGGLSWATTDKELREHFGKYGEIESITVKMDPQTGRSRGFAFLVFKSAENL 122
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
D ++ AG+H I K++DPK+ R KIFVGGL + TE+ +R +F +G+I E +
Sbjct: 123 DKVMNAGEHIINGKRVDPKKAKAR----SGKIFVGGLPQDTTEETIRSFFGTFGNIVEIE 178
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMG 184
PFD+ KN +K FCFI++D++NV +LK PKQVI GKEVDVK+ P++ G
Sbjct: 179 MPFDRVKNQRKNFCFITYDNENVVFDLLKTPKQVINGKEVDVKKATPKPDSFG 231
>gi|350535755|ref|NP_001233020.1| uncharacterized protein LOC100167805 [Acyrthosiphon pisum]
gi|239788448|dbj|BAH70906.1| ACYPI008564 [Acyrthosiphon pisum]
Length = 290
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/243 (41%), Positives = 146/243 (60%), Gaps = 10/243 (4%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RK+FVGGL T EK+++++F Q+GE+E+I++K D TG++RGFAF+ Y T + +D
Sbjct: 45 RDDDRKIFVGGLKGETTEKDLSEHFGQFGEIENINVKVDAATGRARGFAFIVYKTMEGLD 104
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ LA +H I +KKIDPK+ R K+FVGGL+ ++T+ D++DYF +Y + +
Sbjct: 105 NALACTNHVINDKKIDPKKAKAR----HVKLFVGGLSPDLTDDDIKDYFKRYAPLVNAEM 160
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRG 192
P+DK KN +KGFCF++FD ++LK PK VI GK+VDVK+ E G + GA
Sbjct: 161 PYDKVKNQRKGFCFVTFDCMQAVTEILKTPKHVINGKQVDVKKAALKVEPYGMMPGA--- 217
Query: 193 AGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAY 252
+G G Y + Y GY + DY Y+ G A A G DY GY
Sbjct: 218 SGPMRGMRGNVRGRGGRGGYDYYNQYTGY-SPDYSYSYGYPSYGAGA--GADYQYGGYEP 274
Query: 253 PAP 255
PAP
Sbjct: 275 PAP 277
>gi|240848911|ref|NP_001155674.1| heterogeneous nuclear ribonucleoprotein-like [Acyrthosiphon pisum]
gi|239790977|dbj|BAH72014.1| ACYPI006706 [Acyrthosiphon pisum]
Length = 283
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 121/183 (66%), Gaps = 4/183 (2%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+ D+RKLFVGGL T EKE+ ++F QYGE+ +IS+K DP TG+SRGFAF+ + + ++
Sbjct: 29 KEDDRKLFVGGLSWETTEKELKEHFVQYGEITNISLKTDPATGRSRGFAFIIFKSVDGLN 88
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ AAGDH I KKIDPK+ + + K+FVGGL +++T +++++F ++G I +
Sbjct: 89 NAFAAGDHVINGKKIDPKKAKAK----QEKVFVGGLPSDVTNDEIKEFFGKWGVIVNLEV 144
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRG 192
PFDK KN +KG+CFI+++ + + K KQ I GKEVDVK+ P + A+RG
Sbjct: 145 PFDKMKNQRKGYCFITYESSDKVQDLFKTAKQTIKGKEVDVKKAAPKPANPYANPKAMRG 204
Query: 193 AGA 195
GA
Sbjct: 205 RGA 207
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 84 NKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKG 143
N +D + ++V K+FVGGL+ E TE++++++F QYG IT D + +G
Sbjct: 16 NNGVDQSNLEEQVKEDDRKLFVGGLSWETTEKELKEHFVQYGEITNISLKTDPATGRSRG 75
Query: 144 FCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
F FI F + + VI GK++D K+ K E +
Sbjct: 76 FAFIIFKSVDGLNNAFAAGDHVINGKKIDPKKAKAKQEKV 115
>gi|312372973|gb|EFR20814.1| hypothetical protein AND_19410 [Anopheles darlingi]
Length = 293
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 115/159 (72%), Gaps = 4/159 (2%)
Query: 24 LHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIG 83
+ R +++ ++FS YG++ESI++K DP TG+SRGFAF+ Y +++ ++AAGDH I
Sbjct: 100 IRRGQIYQDLKEHFSAYGDIESINVKTDPNTGRSRGFAFIVYKNADSIEKVVAAGDHVIN 159
Query: 84 NKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKG 143
NKK+DPK+ R KIFVGGLT+EI++++++ +F Q+G+I E + PFDK KN +KG
Sbjct: 160 NKKVDPKKAKARHG----KIFVGGLTSEISDEEIKIFFGQFGNIVEVEMPFDKQKNQRKG 215
Query: 144 FCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPET 182
FCFI+FD + V +++LK PKQ I GKEVDVK+ P+
Sbjct: 216 FCFITFDSEQVVNELLKTPKQTISGKEVDVKKATPKPDN 254
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL ++EI +F Q+G + + + D Q +GF F+T+ +++ V++LL
Sbjct: 174 KIFVGGLTSEISDEEIKIFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKT 233
Query: 78 GDHYIGNKKIDPKRVTKR 95
I K++D K+ T +
Sbjct: 234 PKQTISGKEVDVKKATPK 251
>gi|318086976|gb|ADV40080.1| putative RNA-binding protein musashi [Latrodectus hesperus]
Length = 298
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 115/166 (69%), Gaps = 2/166 (1%)
Query: 16 ERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLL 75
++KLF+GG+ R T +K++ +YFS++GEV ++IK DP +G+SRGFAFV + ++ +VD +L
Sbjct: 53 DKKLFIGGISRETNQKDLKEYFSKFGEVTEVNIKTDPTSGRSRGFAFVAFASRDSVDSVL 112
Query: 76 AAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
G H I K+I+ KR +V P KIFVGG+ +++TE D+R+YF YG + + PFD
Sbjct: 113 HNGPHNIKGKQIEAKRA--KVRPGIKKIFVGGIESDMTEADIRNYFEHYGKVEAVELPFD 170
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
K KN ++ FCF++F+D+ DQV K PKQ I KE DVK+ P+
Sbjct: 171 KVKNQRRQFCFVTFEDEMTVDQVCKQPKQKIGNKECDVKKATTKPD 216
>gi|346466281|gb|AEO32985.1| hypothetical protein [Amblyomma maculatum]
Length = 321
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/176 (42%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
NG+ G DERKLFVGG+ +T K++ +YFS++G V ++IK DP TG+SRGF FVT+
Sbjct: 21 NGSDGKTNEDERKLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTF 80
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+ A++ +L A H + K+IDPK R P KIFVGGL +++ E D++ YF ++G
Sbjct: 81 NAKDAIEAVLKATPHTVKGKQIDPKPAKAR--PGIKKIFVGGLESDMPEADIKAYFEKFG 138
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ + PFDK+KN ++ F F++F+ ++ D V + PKQ I KE D+K+ P+
Sbjct: 139 PVENVELPFDKAKNQRRQFAFVTFEREDSVDLVCREPKQKIGNKECDIKKATPKPD 194
>gi|390178416|ref|XP_003736645.1| GA14206, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859440|gb|EIM52718.1| GA14206, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 193
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 98/128 (76%), Gaps = 4/128 (3%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
R+D+RKLFVGGL T EKE+ D+F ++GE+ESI++K DP TG+SRGFAF+ +T +A+D
Sbjct: 51 RDDDRKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAID 110
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ +AG+H I +KK+DPK+ R KIFVGGLTTEI++++++ YFSQ+G+I E +
Sbjct: 111 KVSSAGEHIINSKKVDPKKAKAR----HGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEM 166
Query: 133 PFDKSKNM 140
PFDK K+
Sbjct: 167 PFDKQKSQ 174
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+FVGGL+ E TE+++RD+F ++G I D +GF FI F + D+V
Sbjct: 56 KLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSSA 115
Query: 162 PKQVICGKEVDVKRVK 177
+ +I K+VD K+ K
Sbjct: 116 GEHIINSKKVDPKKAK 131
>gi|391328905|ref|XP_003738923.1| PREDICTED: RNA-binding protein squid-like [Metaseiulus
occidentalis]
Length = 299
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
++RKLF GGL +T + ++ +F +YGE++ ++K DP T +SRGF F+T+ +++AV+D
Sbjct: 43 EDRKLFCGGLSFDTTDADLRSHFEKYGEIQECTVKMDPMTKKSRGFGFITFGSKQAVEDA 102
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
+A H I K+IDPK R P K+F GGL E TE+++R YF QYG+I + P
Sbjct: 103 IAGAPHTIKGKQIDPKAAKAR--PGAKKVFCGGLPPETTEEEIRTYFGQYGNIEALELPV 160
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK KN ++GF F++++ AD +K PKQ I GKE DVK+
Sbjct: 161 DKEKNQRRGFIFVTYETTAAADAAVKKPKQTINGKECDVKK 201
>gi|241627626|ref|XP_002408070.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215501115|gb|EEC10609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 353
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
NG+ DERKLFVGG+ +T K++ +YFS++G V ++IK DP TG+SRGF FVT+
Sbjct: 50 NGSDSKTNEDERKLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTF 109
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
T ++A++ +L A H + K+IDPK R P KIFVGGL +++ E D++ YF ++G
Sbjct: 110 TAKEAIEAVLKATPHTVKGKQIDPKPAKAR--PGIKKIFVGGLESDMPEADIKAYFEKFG 167
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ + PFDK+KN ++ F F++F+ ++ + V + PKQ I KE D+K+ P+
Sbjct: 168 PVENVELPFDKAKNQRRQFAFVTFEREDSVELVCREPKQKIGNKECDIKKATPKPD 223
>gi|226487556|emb|CAX74648.1| Heterogeneous nuclear ribonucleoprotein D0 [Schistosoma japonicum]
Length = 389
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 124/233 (53%), Gaps = 20/233 (8%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D RKLFVGGL T E ++ +YFS++G+V IK D +TG SRGF FVT ++ V
Sbjct: 56 DDSRKLFVGGLSWETNESDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK 115
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+L+ +H++ NKKIDPK+ PL+ KIFVGG+ E+TE +R+YFS +G + P
Sbjct: 116 VLSVSEHWLKNKKIDPKKAKPSREPLR-KIFVGGIDPEVTEDQIREYFSSFGKVESLDLP 174
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
+D K +K + F+SF + A + + +Q I G++ DV+ R
Sbjct: 175 YDTQKGKRKHYIFVSFSTEAAARKAISKERQEIFGRQCDVR------------VAVTRDQ 222
Query: 194 GARVSSAGAAYAAAPGRVVAYPS-TYAGYAAADYGYTAGSYDAYATAYPGYDY 245
R + Y PS +Y GYA DY T +D + ++ GYDY
Sbjct: 223 ANRHKALKQWYNWFD------PSYSYPGYAYGDYANTYPGFDPFTYSFYGYDY 269
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A P R RK+FVGG+ E +I +YFS +G+VES+ + D G+ + + FV+++T+
Sbjct: 134 AKPSREPLRKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTE 193
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKR 95
A ++ I ++ D + R
Sbjct: 194 AAARKAISKERQEIFGRQCDVRVAVTR 220
>gi|56753309|gb|AAW24858.1| SJCHGC06087 protein [Schistosoma japonicum]
gi|226469806|emb|CAX70184.1| Heterogeneous nuclear ribonucleoprotein D0 [Schistosoma japonicum]
Length = 390
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 123/232 (53%), Gaps = 17/232 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D RKLFVGGL T E ++ +YFS++G+V IK D +TG SRGF FVT ++ V
Sbjct: 56 DDSRKLFVGGLSWETNESDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK 115
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+L+ +H++ NKKIDPK+ PL+ KIFVGG+ E+TE +R+YFS +G + P
Sbjct: 116 VLSVSEHWLKNKKIDPKKAKPSREPLR-KIFVGGIDPEVTEDQIREYFSSFGKVESLDLP 174
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
+D K +K + F+SF + A + + +Q I G++ DV+ R
Sbjct: 175 YDTQKGKRKHYIFVSFSTEAAARKAISKERQEIFGRQCDVR------------VAVTRDQ 222
Query: 194 GARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
R A + +YP GYA DY T +D + ++ GYDY
Sbjct: 223 ANRHKVALKQWYNWFDPSYSYP----GYAYGDYANTYPGFDPFTYSFYGYDY 270
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A P R RK+FVGG+ E +I +YFS +G+VES+ + D G+ + + FV+++T+
Sbjct: 134 AKPSREPLRKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTE 193
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKI 103
A ++ I ++ D + R + K+
Sbjct: 194 AAARKAISKERQEIFGRQCDVRVAVTRDQANRHKV 228
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 113/176 (64%), Gaps = 2/176 (1%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
NG+ DERKLFVGG+ +T K++ +YFS++G V ++IK DP TG+SRGF FVT+
Sbjct: 50 NGSDAKTNEDERKLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTF 109
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+ A++ +L A H + K+IDPK R P KIFVGGL +++ E D++ YF ++G
Sbjct: 110 NAKDAIEAVLKATPHTVKGKQIDPKPAKAR--PGIKKIFVGGLESDMPEADIKAYFEKFG 167
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ + PFDK+KN ++ F F++F+ ++ + V + PKQ I KE D+K+ P+
Sbjct: 168 PVENVELPFDKAKNQRRQFAFVTFEREDSVELVCREPKQKIGNKECDIKKATPKPD 223
>gi|389616410|gb|AFK91569.1| squid, partial [Drosophila madeirensis]
gi|389616412|gb|AFK91570.1| squid, partial [Drosophila subobscura]
gi|389616414|gb|AFK91571.1| squid, partial [Drosophila subobscura]
gi|389616416|gb|AFK91572.1| squid, partial [Drosophila subobscura]
gi|389616418|gb|AFK91573.1| squid, partial [Drosophila subobscura]
gi|389616420|gb|AFK91574.1| squid, partial [Drosophila subobscura]
gi|389616422|gb|AFK91575.1| squid, partial [Drosophila subobscura]
gi|389616424|gb|AFK91576.1| squid, partial [Drosophila subobscura]
gi|389616426|gb|AFK91577.1| squid, partial [Drosophila subobscura]
gi|389616428|gb|AFK91578.1| squid, partial [Drosophila subobscura]
gi|389616430|gb|AFK91579.1| squid, partial [Drosophila subobscura]
gi|389616432|gb|AFK91580.1| squid, partial [Drosophila subobscura]
gi|389616434|gb|AFK91581.1| squid, partial [Drosophila subobscura]
gi|389616436|gb|AFK91582.1| squid, partial [Drosophila subobscura]
gi|389616438|gb|AFK91583.1| squid, partial [Drosophila subobscura]
gi|389616440|gb|AFK91584.1| squid, partial [Drosophila subobscura]
gi|389616442|gb|AFK91585.1| squid, partial [Drosophila subobscura]
gi|389616444|gb|AFK91586.1| squid, partial [Drosophila subobscura]
gi|389616446|gb|AFK91587.1| squid, partial [Drosophila subobscura]
gi|389616448|gb|AFK91588.1| squid, partial [Drosophila subobscura]
gi|389616450|gb|AFK91589.1| squid, partial [Drosophila subobscura]
gi|389616452|gb|AFK91590.1| squid, partial [Drosophila subobscura]
gi|389616454|gb|AFK91591.1| squid, partial [Drosophila subobscura]
gi|389616456|gb|AFK91592.1| squid, partial [Drosophila subobscura]
gi|389616458|gb|AFK91593.1| squid, partial [Drosophila subobscura]
gi|389616460|gb|AFK91594.1| squid, partial [Drosophila subobscura]
gi|389616462|gb|AFK91595.1| squid, partial [Drosophila subobscura]
gi|389616464|gb|AFK91596.1| squid, partial [Drosophila subobscura]
gi|389616466|gb|AFK91597.1| squid, partial [Drosophila subobscura]
gi|389616468|gb|AFK91598.1| squid, partial [Drosophila subobscura]
gi|389616470|gb|AFK91599.1| squid, partial [Drosophila subobscura]
gi|389616472|gb|AFK91600.1| squid, partial [Drosophila subobscura]
gi|389616474|gb|AFK91601.1| squid, partial [Drosophila subobscura]
gi|389616476|gb|AFK91602.1| squid, partial [Drosophila subobscura]
Length = 161
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 96/134 (71%), Gaps = 4/134 (2%)
Query: 48 IKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGG 107
+K DP TG+SRGFAF+ +T +A+D + +A +H I +KK+DPK+ R KIFVGG
Sbjct: 1 VKTDPQTGRSRGFAFIVFTNTEAIDKVSSAEEHVINSKKVDPKKAKAR----HGKIFVGG 56
Query: 108 LTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVIC 167
LTTEI++++++ YF Q+G+I E + PFDK K+ +KGFCFI+FD + V +LK PKQ I
Sbjct: 57 LTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIS 116
Query: 168 GKEVDVKRVKFNPE 181
GKEVDVKR PE
Sbjct: 117 GKEVDVKRATPKPE 130
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL ++EI YF Q+G + + + D Q +GF F+T+ +++ V DLL
Sbjct: 51 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKT 110
Query: 78 GDHYIGNKKIDPKRVT 93
I K++D KR T
Sbjct: 111 PKQKISGKEVDVKRAT 126
>gi|196004432|ref|XP_002112083.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
gi|190585982|gb|EDV26050.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
Length = 331
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 135/245 (55%), Gaps = 24/245 (9%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T E+ + YFS++G + S +IKNDP T +SRGFAFVT+ VD +L +
Sbjct: 74 KMFIGGLNWETTEEGLQKYFSKFGTIVSSTIKNDPITHRSRGFAFVTFANPADVDKVLES 133
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-------KIFVGGLTTEITEQDVRDYFSQYGSITEF 130
G H + N+ +DPKR ++ KIF+GGL E TE ++++FS++G+I +
Sbjct: 134 GPHQLDNRTVDPKRALPLHKQIQLKGQHRTKKIFIGGLGAEHTESSLKEFFSEFGNILDV 193
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAV 190
+ DK ++GFCF+SFD + D+ + V+ G++V++KR P+ S
Sbjct: 194 EFVTDKLTRKRRGFCFLSFDTEEAVDKACEKQFHVVSGRQVEIKRA--TPKDQAS----- 246
Query: 191 RGAGARVSS-AGAAYAAAPGRVVAYPSTYAGYAAADYG--YTAGSYDAYATAYPGYDYSA 247
RG A+ S A Y AYP+ Y GY A Y T +Y Y AYPG +Y +
Sbjct: 247 RGKSAQYSGYPNAQYQQ------AYPNYYQGYPYAAYPSYTTTAAYVGYQAAYPG-NYGS 299
Query: 248 MGYAY 252
+ Y
Sbjct: 300 ADFQY 304
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G++ +K+F+GGL E + ++FS++G + + D T + RGF F+++ T++AV
Sbjct: 159 GQHRTKKIFIGGLGAEHTESSLKEFFSEFGNILDVEFVTDKLTRKRRGFCFLSFDTEEAV 218
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR 95
D H + ++++ KR T +
Sbjct: 219 DKACEKQFHVVSGRQVEIKRATPK 242
>gi|256081430|ref|XP_002576973.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645372|emb|CCD59901.1| heterogeneous nuclear ribonucleoprotein,putative [Schistosoma
mansoni]
Length = 381
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 121/231 (52%), Gaps = 27/231 (11%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D RKLFVGGL T E ++ +YFS++G+V IK D +TG SRGF FVT ++ V
Sbjct: 48 DDSRKLFVGGLSWETNENDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK 107
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+L+ +H++ NKKIDPK+ PLK KIFVGG+ E+TE +R+YFS +G + P
Sbjct: 108 VLSVPEHWLKNKKIDPKKAKPSREPLK-KIFVGGIDPEVTEDQIREYFSSFGKVESLDLP 166
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
+D K +K + F+SF + A + + +Q I G++ DV+ R
Sbjct: 167 YDTQKGKRKHYIFVSFSTEAAAKKAISKERQDIFGRQCDVR------------VAVTRDQ 214
Query: 194 GARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYD 244
R + VA Y + ++ Y +Y +A AYPG+D
Sbjct: 215 ANR-------------QKVALKQWY-NWLDPNFSYPGYAYGDFANAYPGFD 251
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A P R +K+FVGG+ E +I +YFS +G+VES+ + D G+ + + FV+++T+
Sbjct: 126 AKPSREPLKKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTE 185
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKR 95
A ++ I ++ D + R
Sbjct: 186 AAAKKAISKERQDIFGRQCDVRVAVTR 212
>gi|256081434|ref|XP_002576975.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645374|emb|CCD59903.1| heterogeneous nuclear ribonucleoprotein,putative [Schistosoma
mansoni]
Length = 380
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 119/231 (51%), Gaps = 28/231 (12%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D RKLFVGGL T E ++ +YFS++G+V IK D +TG SRGF FVT ++ V
Sbjct: 48 DDSRKLFVGGLSWETNENDLKEYFSRWGKVTQCIIKLDRFTGNSRGFGFVTLESEDCVSK 107
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+L+ +H++ NKKIDPK+ PLK KIFVGG+ E+TE +R+YFS +G + P
Sbjct: 108 VLSVPEHWLKNKKIDPKKAKPSREPLK-KIFVGGIDPEVTEDQIREYFSSFGKVESLDLP 166
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
+D K +K + F+SF + A + + +Q I G++ DV+ R
Sbjct: 167 YDTQKGKRKHYIFVSFSTEAAAKKAISKERQDIFGRQCDVR------------VAVTRDQ 214
Query: 194 GARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYD 244
R + Y + ++ Y +Y +A AYPG+D
Sbjct: 215 ANRQKALKQWY---------------NWLDPNFSYPGYAYGDFANAYPGFD 250
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A P R +K+FVGG+ E +I +YFS +G+VES+ + D G+ + + FV+++T+
Sbjct: 126 AKPSREPLKKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTE 185
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKR 95
A ++ I ++ D + R
Sbjct: 186 AAAKKAISKERQDIFGRQCDVRVAVTR 212
>gi|225712192|gb|ACO11942.1| RNA-binding protein squid [Lepeophtheirus salmonis]
Length = 268
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 113/169 (66%), Gaps = 7/169 (4%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D+RKLFVGGL + E ++ +YF YG V S +K D TG+SRGFAFV + T ++++ +
Sbjct: 15 DDRKLFVGGLPQEASENDLKEYFEAYGSVTSTVLKMDQMTGRSRGFAFVVFATPESLESV 74
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGG-LTTEITEQDVRDYFSQYGSITEFQQP 133
L +H + KK+ K+ T + + K++VG L ITE+D++ +FSQYG++ E Q+P
Sbjct: 75 LEQ-EHVVKGKKVACKKATAK----QGKVYVGKFLDGSITEEDIKSHFSQYGTVVEIQRP 129
Query: 134 FDKSKNMK-KGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
D+SKN + K FCF++FD ++ A+++LK K + G+EV++K+V PE
Sbjct: 130 VDRSKNSEPKNFCFVTFDKEDPAEKLLKEKKVTLNGQEVEIKKVTIKPE 178
>gi|196476793|gb|ACG76260.1| heterogeneous nuclear ribonucleoprotein [Amblyomma americanum]
Length = 195
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
NG+ G DERKLFVGG+ +T K++ +YFS++G V ++IK DP TG+SRGF FVT+
Sbjct: 21 NGSDGKTNEDERKLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTF 80
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+ A++ +L A H + K+IDPK R P KIFVGGL +++ E D++ YF YG
Sbjct: 81 NAKDAIEAVLKATPHTVKGKQIDPKPAKAR--PGIKKIFVGGLESDMPEADIKAYFEMYG 138
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
+ + PFDK+K ++ F F++F+ ++ D V + P Q + K DV + P+
Sbjct: 139 PVENVELPFDKAKIQRRQFAFVTFEREDSVDLVCREPMQKMGNKGCDVTKATXMPD 194
>gi|146197797|dbj|BAF57616.1| pRM10 protein [Dugesia japonica]
Length = 325
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D RKLFVGGL T E+++ +YF +G+V IK D TG SRGF FVT T+ ++
Sbjct: 69 DDSRKLFVGGLSWETTEEDLKNYFETWGKVAHCVIKLDKMTGNSRGFGFVTMDTEDSLKK 128
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+L +H + NKKIDPK P K KIFVGGL+ E+TE+ +++YFSQYGS+ P
Sbjct: 129 VLEVPEHRLKNKKIDPKPAKPTKEPNK-KIFVGGLSPEVTEEQIKEYFSQYGSVESVDLP 187
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
FD SK +K + F+SF ++ A + N KQ + G + DV+
Sbjct: 188 FDTSKGKRKPYVFLSFTTEDAAKNAIINEKQDVLGSKCDVR 228
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A P + +K+FVGGL E++I +YFSQYG VES+ + D G+ + + F+++TT+
Sbjct: 147 AKPTKEPNKKIFVGGLSPEVTEEQIKEYFSQYGSVESVDLPFDTSKGKRKPYVFLSFTTE 206
Query: 69 KAVDDLLAAGDHYIGNKKID 88
A + + + K D
Sbjct: 207 DAAKNAIINEKQDVLGSKCD 226
>gi|291243919|ref|XP_002741849.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Saccoglossus kowalevskii]
Length = 415
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 140/247 (56%), Gaps = 11/247 (4%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
++D+ KLFVGGL T +K++ +YF ++G V +IK DP TG+SRGF FV + +V+
Sbjct: 79 QDDDGKLFVGGLSWETTQKDLKEYFKKFGPVVDCTIKIDPVTGRSRGFGFVLFADGASVE 138
Query: 73 DLLAAGDHYIGNKKIDPKRVTKR-VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
+L +H + + IDPKR R P KIFVGGL E E ++RDYF+++G+I E +
Sbjct: 139 KVLQPQEHKLDGRIIDPKRAKARGGQPPITKIFVGGLNPEYPENELRDYFTKFGAIKEVE 198
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR-VKFNPETMGSVSGAV 190
P D++ N ++GFCFI F+ ++ +++ K ++ + +VK+ + T +V+ AV
Sbjct: 199 LPIDRATNKRRGFCFIEFEKEDSVEEICKQQFHLLGNNKCEVKKATPKDQNTKQAVTAAV 258
Query: 191 RGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAA-------DYGYTAGSYDAYATAYPGY 243
+ ++A AAYAA G P+ Y + AA GY+ SY Y+ P
Sbjct: 259 IPGASAAAAAAAAYAAGTGLGRGVPNAYPAFYAAPTSIAGLSPGYSTYSYGGYSA--PMS 316
Query: 244 DYSAMGY 250
Y+A GY
Sbjct: 317 PYAAAGY 323
>gi|443692084|gb|ELT93758.1| hypothetical protein CAPTEDRAFT_170758 [Capitella teleta]
Length = 238
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 105/167 (62%), Gaps = 5/167 (2%)
Query: 9 AGPGRNDE-RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
AG ++E RK+FVGGL T K++ DYFS++GEV ++K D TG+SRGF FVT+
Sbjct: 54 AGSCEDEESRKIFVGGLSWETTVKDMKDYFSKFGEVTDATLKTDQNTGRSRGFGFVTFVD 113
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVTKR--VNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
V+ ++ H + K IDPKR R P+K KIFVGGL E+ E ++R +FS+YG
Sbjct: 114 STCVNRVIEQTQHTLHGKNIDPKRAKARPGREPVK-KIFVGGLDPEVPEDEIRQHFSKYG 172
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK-NPKQVICGKEV 171
+ E + PFD+SKN ++ FCF+SFD D + + + K V+ GK V
Sbjct: 173 KVEEVELPFDRSKNQRRFFCFVSFDTGEAVDALCQESEKHVLGGKNV 219
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
KIFVGGL+ E T +D++DYFS++G +T+ D++ +GF F++F D ++V++
Sbjct: 64 KIFVGGLSWETTVKDMKDYFSKFGEVTDATLKTDQNTGRSRGFGFVTFVDSTCVNRVIEQ 123
Query: 162 PKQVICGKEVDVKRVKFNP 180
+ + GK +D KR K P
Sbjct: 124 TQHTLHGKNIDPKRAKARP 142
>gi|256081432|ref|XP_002576974.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
gi|350645373|emb|CCD59902.1| heterogeneous nuclear ribonucleoprotein,putative [Schistosoma
mansoni]
Length = 392
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 40/243 (16%)
Query: 14 NDERKLFVGGLHRNTGEKEIN------------DYFSQYGEVESISIKNDPYTGQSRGFA 61
+D RKLFVGGL T E +++ +YFS++G+V IK D +TG SRGF
Sbjct: 48 DDSRKLFVGGLSWETNESKVSCLLFTISSDDLKEYFSRWGKVTQCIIKLDRFTGNSRGFG 107
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYF 121
FVT ++ V +L+ +H++ NKKIDPK+ PLK KIFVGG+ E+TE +R+YF
Sbjct: 108 FVTLESEDCVSKVLSVPEHWLKNKKIDPKKAKPSREPLK-KIFVGGIDPEVTEDQIREYF 166
Query: 122 SQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
S +G + P+D K +K + F+SF + A + + +Q I G++ DV+
Sbjct: 167 SSFGKVESLDLPYDTQKGKRKHYIFVSFSTEAAAKKAISKERQDIFGRQCDVR------- 219
Query: 182 TMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYP 241
R R + Y + ++ Y +Y +A AYP
Sbjct: 220 -----VAVTRDQANRQKALKQWY---------------NWLDPNFSYPGYAYGDFANAYP 259
Query: 242 GYD 244
G+D
Sbjct: 260 GFD 262
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A P R +K+FVGG+ E +I +YFS +G+VES+ + D G+ + + FV+++T+
Sbjct: 138 AKPSREPLKKIFVGGIDPEVTEDQIREYFSSFGKVESLDLPYDTQKGKRKHYIFVSFSTE 197
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKR 95
A ++ I ++ D + R
Sbjct: 198 AAAKKAISKERQDIFGRQCDVRVAVTR 224
>gi|379056197|dbj|BAL68140.1| RNA-binding protein Musashi homolog 1 Long [Danio rerio]
Length = 349
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 138/271 (50%), Gaps = 30/271 (11%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + DYF ++GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAY-ATAYPGYDYSA 247
+ RG RV+ Y G A G Y + AT Y G Y++
Sbjct: 195 SSRGRA---------------RVMPY-----GMDAFMLGIGMLGYPGFQATTYAGRSYTS 234
Query: 248 M--GYAYPAPAVQTMDTPLVVMMHMLQHTLV 276
+ GY Y P TPL+ H + T +
Sbjct: 235 LTPGYTYQFPEFHLERTPLLTSPHPPELTAI 265
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 129/239 (53%), Gaps = 22/239 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T + + +YFS++GE+ + + DP T +SRGF FVT+ +V+
Sbjct: 19 HDPGKMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPASVEK 78
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA G H + KKIDPK KR +P K+FVGGL+ T +DV++YF Q+G I
Sbjct: 79 VLANGPHELDGKKIDPKIAFPKRAHPKMVTRTKKVFVGGLSAPTTLEDVKNYFQQFGRIE 138
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK N +GF F++F+ ++V D+V + I K V+ K+ + P+ + +
Sbjct: 139 DAMLMFDKQTNRHRGFGFVTFELEDVVDKVCEVHFHEINNKMVECKKAQ--PKEVMMPNS 196
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSA 247
RG GA + A T AG+ A YGY+ G Y Y T + GY ++
Sbjct: 197 VARGRGAELVWPLGAL------------TEAGFPA--YGYSRGGYPGYPTGF-GYPFAV 240
>gi|410915344|ref|XP_003971147.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Takifugu rubripes]
Length = 407
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 25/259 (9%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G+ ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF
Sbjct: 6 SQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQD 116
FVT+T +VD +LA H + +K IDPK +R P KIFVGGL+ +D
Sbjct: 66 FVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVED 125
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKE 170
V+ YF Q+G + + FDK+ N +GF FI+F+++++ ++V + N K V C K+
Sbjct: 126 VKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVEC-KK 184
Query: 171 VDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTA 230
K V F P T G G A + G +++YP+ A Y GYT
Sbjct: 185 AQPKEVMFPPGTRGRARGLSYTMDAFMLGMG---------MLSYPNIVATYGR---GYT- 231
Query: 231 GSYDAYATAYPGYDYSAMG 249
G +Y+ +PG+ +A G
Sbjct: 232 GFAPSYSYQFPGFPATAYG 250
>gi|410915348|ref|XP_003971149.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 4
[Takifugu rubripes]
Length = 350
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 25/259 (9%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G+ ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF
Sbjct: 6 SQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQD 116
FVT+T +VD +LA H + +K IDPK +R P KIFVGGL+ +D
Sbjct: 66 FVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVED 125
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKE 170
V+ YF Q+G + + FDK+ N +GF FI+F+++++ ++V + N K V C K+
Sbjct: 126 VKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVEC-KK 184
Query: 171 VDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTA 230
K V F P T G G A + G +++YP+ A Y GYT
Sbjct: 185 AQPKEVMFPPGTRGRARGLSYTMDAFMLGMG---------MLSYPNIVATYGR---GYT- 231
Query: 231 GSYDAYATAYPGYDYSAMG 249
G +Y+ +PG+ +A G
Sbjct: 232 GFAPSYSYQFPGFPATAYG 250
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 116/209 (55%), Gaps = 13/209 (6%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
A+G+ ND K+F+GGL T + + +YF++YG++ + + DP T +SRGF F+T
Sbjct: 10 ASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFIT 69
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRD 119
+ +VD +LA G+H + KKIDPK +R +P KIFVGGL+ T +DV++
Sbjct: 70 FADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKN 129
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDV 173
YF Q+G I + FDK N +GF F++F ++V D+V + N K V C K+
Sbjct: 130 YFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVEC-KKAQP 188
Query: 174 KRVKFNPETMGSVSGAVRGAGARVSSAGA 202
K V P + A RGA + S GA
Sbjct: 189 KEVML-PANLAKTRAANRGAYDFMWSLGA 216
>gi|410915342|ref|XP_003971146.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Takifugu rubripes]
Length = 388
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 134/259 (51%), Gaps = 25/259 (9%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G+ ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF
Sbjct: 6 SQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQD 116
FVT+T +VD +LA H + +K IDPK +R P KIFVGGL+ +D
Sbjct: 66 FVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVED 125
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKE 170
V+ YF Q+G + + FDK+ N +GF FI+F+++++ ++V + N K V C K+
Sbjct: 126 VKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVEC-KK 184
Query: 171 VDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTA 230
K V F P T G G A + G +++YP+ A Y GYT
Sbjct: 185 AQPKEVMFPPGTRGRARGLSYTMDAFMLGMG---------MLSYPNIVATYGR---GYT- 231
Query: 231 GSYDAYATAYPGYDYSAMG 249
G +Y+ +PG+ +A G
Sbjct: 232 GFAPSYSYQFPGFPATAYG 250
>gi|410922315|ref|XP_003974628.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 348
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 24/268 (8%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF +YGEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPAG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ A Y + YA PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQTATY-----TSRTYAGITPGYTYQ-- 242
Query: 249 GYAYPAPAVQTMDTPLVVMMHMLQHTLV 276
P TPL+ H + T +
Sbjct: 243 -----FPEFHLERTPLLTSPHPPELTAI 265
>gi|410922321|ref|XP_003974631.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 4
[Takifugu rubripes]
Length = 341
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 24/268 (8%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF +YGEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPAG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ A Y + YA PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQTATY-----TSRTYAGITPGYTYQ-- 242
Query: 249 GYAYPAPAVQTMDTPLVVMMHMLQHTLV 276
P TPL+ H + T +
Sbjct: 243 -----FPEFHLERTPLLTSPHPPELTAI 265
>gi|410915346|ref|XP_003971148.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Takifugu rubripes]
Length = 328
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 136/259 (52%), Gaps = 25/259 (9%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G+ ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF
Sbjct: 6 SQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQD 116
FVT+T +VD +LA H + +K IDPK R ++ KIFVGGL+ +D
Sbjct: 66 FVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVED 125
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKE 170
V+ YF Q+G + + FDK+ N +GF FI+F+++++ ++V + N K V C K+
Sbjct: 126 VKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINNKMVEC-KK 184
Query: 171 VDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTA 230
K V F P T G G +S A+ G +++YP+ A Y GYT
Sbjct: 185 AQPKEVMFPPGTRGRARG--------LSYTMDAFMLGMG-MLSYPNIVATYGR---GYT- 231
Query: 231 GSYDAYATAYPGYDYSAMG 249
G +Y+ +PG+ +A G
Sbjct: 232 GFAPSYSYQFPGFPATAYG 250
>gi|410922319|ref|XP_003974630.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Takifugu rubripes]
Length = 363
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 24/268 (8%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF +YGEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPAG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ A Y + YA PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQTATY-----TSRTYAGITPGYTYQ-- 242
Query: 249 GYAYPAPAVQTMDTPLVVMMHMLQHTLV 276
P TPL+ H + T +
Sbjct: 243 -----FPEFHLERTPLLTSPHPPELTAI 265
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 116/209 (55%), Gaps = 13/209 (6%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
A+G+ ND K+F+GGL T + + +YF++YG++ + + DP T +SRGF F+T
Sbjct: 10 ASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFIT 69
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRD 119
+ +VD +LA G+H + KKIDPK +R +P KIFVGGL+ T +DV++
Sbjct: 70 FADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKN 129
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDV 173
YF Q+G I + FDK N +GF F++F ++V D+V + N K V C K+
Sbjct: 130 YFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVEC-KKAQP 188
Query: 174 KRVKFNPETMGSVSGAVRGAGARVSSAGA 202
K V P + A RGA + S GA
Sbjct: 189 KEVML-PANLAKTRAANRGAYDFMWSLGA 216
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 101/162 (62%), Gaps = 3/162 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 10 RKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMV 69
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+HY+ K IDPKR R K KIFVGG++ E TEQ+ +++F+Q+G + + D
Sbjct: 70 K-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMID 128
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
K +GF F++FD + + L P ICGK ++VK+ +
Sbjct: 129 KDTGRPRGFGFVTFDSEAAVEAALSRPL-AICGKPIEVKKAQ 169
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 24/261 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF ++GEV+ + DP T +SRGF FVTY Q V+
Sbjct: 19 HDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEK 78
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 79 VLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 138
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + + +G
Sbjct: 139 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMTPTG 196
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ A YT+ SY A
Sbjct: 197 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQTAT--YTSRSYSGIAP---------- 239
Query: 249 GYAYPAPAVQTMDTPLVVMMH 269
GY Y P TPL+ H
Sbjct: 240 GYTYQFPEFHLERTPLLTSSH 260
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 101/159 (63%), Gaps = 2/159 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +VD +L
Sbjct: 212 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASVDKVLD 271
Query: 77 AGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+H + + IDPK+ + + +P+K KIFVGGL E TE +RDYF ++G I + P D
Sbjct: 272 QKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEDKIRDYFGEFGEIEAIELPMD 330
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F ++ ++L+ + G + ++K
Sbjct: 331 PKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIK 369
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 95 RVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNV 154
R P K+FVGGL+ + +++D++DYF+++G + + D + +GF FI F +
Sbjct: 206 RKQPELRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAAS 265
Query: 155 ADQVLKNPKQVICGKEVDVKR 175
D+VL + + G+ +D K+
Sbjct: 266 VDKVLDQKEHRLDGRVIDPKK 286
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G G ++ K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K
Sbjct: 98 GTGIKEDGKMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPK 157
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V+ ++ +HY+ K IDPKR R K KIFVGG++ E TEQ+ +++F+Q+G +
Sbjct: 158 TVNTVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVI 216
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + + L P ICGK ++VK+ +
Sbjct: 217 DATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPL-AICGKPIEVKKAQ 264
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 129/237 (54%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF +YGEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ A Y + +YA PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQTATY-----TSRSYAGITPGYTY 241
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 135/261 (51%), Gaps = 24/261 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF ++GEV+ + DP T +SRGF FVTY Q V+
Sbjct: 19 HDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEK 78
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 79 VLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 138
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + + +G
Sbjct: 139 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMTPTG 196
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ A YT+ SY A
Sbjct: 197 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQTAT--YTSRSYSGIAP---------- 239
Query: 249 GYAYPAPAVQTMDTPLVVMMH 269
GY Y P TPL+ H
Sbjct: 240 GYTYQFPEFHLERTPLLTSSH 260
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 104/169 (61%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G G ++ K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K
Sbjct: 98 GTGIKEDGKMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPK 157
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V+ ++ +HY+ K IDPKR R K KIFVGG++ E TEQ+ +++F+Q+G +
Sbjct: 158 TVNTVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVI 216
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + + L P ICGK ++VK+ +
Sbjct: 217 DATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPL-AICGKPIEVKKAQ 264
>gi|344284992|ref|XP_003414248.1| PREDICTED: hypothetical protein LOC100654996 [Loxodonta africana]
Length = 595
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 329 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 388
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 389 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 447
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 448 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 482
>gi|327282602|ref|XP_003226031.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Anolis carolinensis]
Length = 352
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 132/256 (51%), Gaps = 24/256 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 18 HDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDK 77
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 78 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 137
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G
Sbjct: 138 DAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 195
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ AA Y A Y A
Sbjct: 196 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQAATY------------ASRSYTGIAP 238
Query: 249 GYAYPAPAVQTMDTPL 264
GY Y P + TPL
Sbjct: 239 GYTYQFPEFRVERTPL 254
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 133/259 (51%), Gaps = 25/259 (9%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G+ ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF
Sbjct: 6 SQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQD 116
FVT+ +VD +LA H + +K IDPK +R P KIFVGGL+ +D
Sbjct: 66 FVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVED 125
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKE 170
V+ YF Q+G + + FDK+ N +GF F++F++++V ++V + N K V C K+
Sbjct: 126 VKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KK 184
Query: 171 VDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTA 230
K V F P T G G A + G +++YP+ A Y GYT
Sbjct: 185 AQPKEVMFPPGTRGRARGLPYTMDAFMLGMG---------MLSYPNIVATYGR---GYT- 231
Query: 231 GSYDAYATAYPGYDYSAMG 249
G +Y+ +PG+ +A G
Sbjct: 232 GFAPSYSYQFPGFPATAYG 250
>gi|61806598|ref|NP_001013534.1| RNA-binding protein Musashi homolog 1 [Danio rerio]
gi|60688517|gb|AAH90916.1| Musashi homolog 1 (Drosophila) [Danio rerio]
gi|182888902|gb|AAI64361.1| Msi1 protein [Danio rerio]
gi|379056199|dbj|BAL68141.1| RNA-binding protein Musashi homolog 1 Short [Danio rerio]
Length = 330
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 133/238 (55%), Gaps = 19/238 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + DYF ++GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGA-AYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG ARV G A+ G ++ YP G+ A Y AG +Y + PGY Y
Sbjct: 195 SSRGR-ARVMPYGMDAFMLGIG-MLGYP----GFQATTY---AGR--SYTSLTPGYTY 241
>gi|327282604|ref|XP_003226032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Anolis carolinensis]
Length = 325
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 128/237 (54%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 18 HDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQAGVDK 77
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 78 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 137
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G
Sbjct: 138 DAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 195
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ AA Y + +Y PGY Y
Sbjct: 196 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQAATY-----ASRSYTGIAPGYTY 242
>gi|410922317|ref|XP_003974629.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 329
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF +YGEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPAG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ A Y + YA PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQTATY-----TSRTYAGITPGYTY 241
>gi|508270|gb|AAA64654.1| A+U-rich RNA-binding protein [Mus musculus]
Length = 269
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 58 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 117
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 118 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 176
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P DK N ++GFCFI+F ++ ++++
Sbjct: 177 VESIELPMDKKTNKRRGFCFITFKEEEPVKKIMEK 211
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL +T E++I +YF +GEVESI + D T + RGF F+T+ ++ V ++
Sbjct: 151 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKKTNKRRGFCFITFKEEEPVKKIME 210
Query: 77 AGDHYIGNKKIDPK 90
H +G K + K
Sbjct: 211 KKYHNVGLSKCEIK 224
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+F+GGL+ + T++D++DYFS++G + + D +GF F+ F + D+V+
Sbjct: 67 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 126
Query: 162 PKQVICGKEVDVKRVK 177
+ + GK +D KR K
Sbjct: 127 KEHKLNGKVIDPKRAK 142
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL T E + YFS+YGEV I DP T + RGF FVT+T Q +V++++
Sbjct: 13 KIFVGGLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVEEVMKN 72
Query: 78 GDHYIGNKKIDPKRVTKR----------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
G H + NK IDPK T + N K+FVGG+ TE DVR +F Q+G +
Sbjct: 73 GPHTLDNKTIDPKPATMKSATPPSQGGSFNGRVKKVFVGGIAAGTTEDDVRSFFGQFGPV 132
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
TE FDK+ +GF F+ FD ++V D++ + I GK V+VK+ +
Sbjct: 133 TEIDLKFDKATQRMRGFGFVGFDSEDVVDRLCQIHFHQINGKTVEVKKAE 182
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGG+ T E ++ +F Q+G V I +K D T + RGF FV + ++ VD L
Sbjct: 106 KKVFVGGIAAGTTEDDVRSFFGQFGPVTEIDLKFDKATQRMRGFGFVGFDSEDVVDRLCQ 165
Query: 77 AGDHYIGNKKIDPKRVTKRVN 97
H I K ++ K+ R +
Sbjct: 166 IHFHQINGKTVEVKKAEPRFS 186
>gi|449477049|ref|XP_002196403.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Taeniopygia
guttata]
Length = 330
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 130/251 (51%), Gaps = 24/251 (9%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL T ++ + +YFSQ+GEV+ + DP T +SRGF FVT+ Q VD +LA
Sbjct: 1 MFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 79 DHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G + +
Sbjct: 61 RHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 120
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG
Sbjct: 121 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARGR 178
Query: 194 GARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAYP 253
+ A+ G ++ YP G+ AA Y A Y A GY Y
Sbjct: 179 SRVMPYGMDAFMLGIG-MLGYP----GFQAATY------------ASRSYTGIAPGYTYQ 221
Query: 254 APAVQTMDTPL 264
P + TPL
Sbjct: 222 FPEFRVERTPL 232
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 88 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 148 IHFHEINNKMVECKK 162
>gi|67972636|ref|NP_997752.2| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|42542905|gb|AAH66454.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|67677894|gb|AAH97183.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 2/161 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A G D K+FVGGL +T +K++ DYFS++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 ASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEP 120
Query: 69 KAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
VD +LA +H + ++IDPK+ + + P+K KIFVGGL E TE+ +R+YF +G I
Sbjct: 121 SGVDKVLAQKEHRLDGRQIDPKKAMAMKKEPVK-KIFVGGLNPETTEERIREYFGAFGEI 179
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICG 168
+ P D N ++GF FI+F ++ ++L+ + G
Sbjct: 180 ETIELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHNVSG 220
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF QYGEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTS 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ AA Y + +YA PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQAATY-----ASRSYAGLAPGYTY 241
>gi|291401535|ref|XP_002717031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Oryctolagus
cuniculus]
Length = 448
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 182 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 241
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 242 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 300
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 301 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 335
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF QYGEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTS 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ AA Y + +YA PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQAATY-----ASRSYAGLAPGYTY 241
>gi|154799954|dbj|BAF75022.1| Musashi-1a [Cynops pyrrhogaster]
Length = 361
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF QYGEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTS 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ AA Y + +YA PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQAATY-----ASRSYAGLAPGYTY 241
>gi|225713050|gb|ACO12371.1| RNA-binding protein squid [Lepeophtheirus salmonis]
Length = 283
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/172 (40%), Positives = 117/172 (68%), Gaps = 5/172 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D+RKLFVGGL ++ + +I ++F +GE+ESI+IK DP TG+SRGFAFV + + + ++
Sbjct: 22 DDRKLFVGGLPQDAKDCDIKEHFEGFGEIESINIKTDPQTGRSRGFAFVVFKSLEGLEKA 81
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
++A +H + +KK+ K+ + + K++VG L EI+++D++ +FSQYG + +QPF
Sbjct: 82 VSA-EHTVKSKKVAVKKAQAK----QGKVYVGKLKPEISDEDIKTHFSQYGPVANVEQPF 136
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
DK+KN +K FCFI+F+ + A ++LK + G E+++K+V P+ G V
Sbjct: 137 DKTKNERKNFCFITFEKEEPAKKLLKEGTVTLKGAELEIKKVTPKPDIRGMV 188
>gi|432899440|ref|XP_004076559.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Oryzias latipes]
Length = 347
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 132/259 (50%), Gaps = 25/259 (9%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G+ ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF
Sbjct: 6 SQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQD 116
FVT+T +VD +LA H + K IDPK +R P KIFVGGL+ +D
Sbjct: 66 FVTFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVED 125
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKE 170
V+ YF Q+G + + FDK+ N +GF FI+F+ +++ ++V + N K V C K+
Sbjct: 126 VKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVEC-KK 184
Query: 171 VDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTA 230
K V F P T G G A + G +++YP+ A Y GYT
Sbjct: 185 AQPKEVMFPPGTRGRARGLPYTMDAFMLGMG---------MLSYPNIVATYGR---GYT- 231
Query: 231 GSYDAYATAYPGYDYSAMG 249
G +Y+ +PG+ +A G
Sbjct: 232 GFAPSYSYQFPGFPATAYG 250
>gi|154799956|dbj|BAF75023.1| Musashi-1b [Cynops pyrrhogaster]
Length = 346
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF QYGEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTS 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ AA Y + +YA PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQAATY-----ASRSYAGLAPGYTY 241
>gi|4505255|ref|NP_002433.1| RNA-binding protein Musashi homolog 1 [Homo sapiens]
gi|125630689|ref|NP_001074996.1| RNA-binding protein Musashi homolog 1 [Bos taurus]
gi|296213096|ref|XP_002753122.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Callithrix
jacchus]
gi|51316193|sp|O43347.1|MSI1H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|2769698|gb|AAB95636.1| similar to murine RNA-binding protein; 99% similar to D49654
(PID:g1434857) [Homo sapiens]
gi|3786320|dbj|BAA33962.1| Musashi [Homo sapiens]
gi|119618592|gb|EAW98186.1| musashi homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
gi|124358513|dbj|BAF45938.1| RNA-binding protein Musashi-1 [Bos taurus]
gi|147897997|gb|AAI40381.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|148921740|gb|AAI46464.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|208966796|dbj|BAG73412.1| musashi homolog 1 [synthetic construct]
Length = 362
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 24/256 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ A +Y + + Y A
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS-----YTGLAP 237
Query: 249 GYAYPAPAVQTMDTPL 264
GY Y P + TPL
Sbjct: 238 GYTYQFPEFRVERTPL 253
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 65 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 124
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G
Sbjct: 125 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGE 183
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 184 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIK 231
>gi|119618591|gb|EAW98185.1| musashi homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 351
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 133/256 (51%), Gaps = 24/256 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ A +Y + + Y A
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS-----YTGLAP 237
Query: 249 GYAYPAPAVQTMDTPL 264
GY Y P + TPL
Sbjct: 238 GYTYQFPEFRVERTPL 253
>gi|58332792|ref|NP_001011470.1| musashi RNA-binding protein 1 [Xenopus (Silurana) tropicalis]
gi|147899394|ref|NP_001081302.1| nrp-1B [Xenopus laevis]
gi|214632|gb|AAA49920.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
gi|52221204|gb|AAH82667.1| LOC397764 protein [Xenopus laevis]
gi|56970642|gb|AAH88603.1| musashi homolog 1 [Xenopus (Silurana) tropicalis]
Length = 340
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 132/256 (51%), Gaps = 24/256 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YFS +G+V+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCDIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+VRG + A+ G ++ YP G+ AA Y A Y A
Sbjct: 195 SVRGRSRVMPYGMDAFMLGIG-MLGYP----GFQAATY------------ASRSYTGIAP 237
Query: 249 GYAYPAPAVQTMDTPL 264
GY Y P + TPL
Sbjct: 238 GYTYQFPEFRVERTPL 253
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 24/256 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ A +Y + + Y A
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS-----YTGLAP 237
Query: 249 GYAYPAPAVQTMDTPL 264
GY Y P + TPL
Sbjct: 238 GYTYQFPEFRVERTPL 253
>gi|410948034|ref|XP_003980746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Felis
catus]
Length = 300
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 105/172 (61%), Gaps = 2/172 (1%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R G A R K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+
Sbjct: 25 RPRGDARVERERRTKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFI 84
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFS 122
+ +V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF
Sbjct: 85 LFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFG 143
Query: 123 QYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
++G I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 144 EFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 195
>gi|392465146|dbj|BAM24697.1| musashi homolog 1 [Sus scrofa]
Length = 362
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 24/255 (9%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +
Sbjct: 18 DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 77
Query: 75 LAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G + +
Sbjct: 78 LAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGS 195
Query: 190 VRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMG 249
RG + A+ G ++ YP G+ A +Y + + Y A G
Sbjct: 196 ARGRSRVMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS-----YTGLAPG 238
Query: 250 YAYPAPAVQTMDTPL 264
Y Y P + TPL
Sbjct: 239 YTYQFPEFRVERTPL 253
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 13/200 (6%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
A+G+ ND K+F+GGL T + + +YF++YG++ + + DP T +SRGF F+T
Sbjct: 10 ASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFIT 69
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRD 119
+ +VD +LA G H + KKIDPK +R +P KIFVGGL+ T +DV++
Sbjct: 70 FADPASVDKVLAQGTHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKN 129
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDV 173
YF Q+G I + FDK N +GF F++F ++V D+V + N K V C K+
Sbjct: 130 YFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVEC-KKAQP 188
Query: 174 KRVKFNPETMGSVSGAVRGA 193
K V P + A RGA
Sbjct: 189 KEVML-PANLAKTRAAGRGA 207
>gi|432899442|ref|XP_004076560.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Oryzias latipes]
Length = 328
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 132/259 (50%), Gaps = 25/259 (9%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G+ ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF
Sbjct: 6 SQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQD 116
FVT+T +VD +LA H + K IDPK +R P KIFVGGL+ +D
Sbjct: 66 FVTFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVED 125
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKE 170
V+ YF Q+G + + FDK+ N +GF FI+F+ +++ ++V + N K V C K+
Sbjct: 126 VKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVEC-KK 184
Query: 171 VDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTA 230
K V F P T G G A + G +++YP+ A Y GYT
Sbjct: 185 AQPKEVMFPPGTRGRARGLPYTMDAFMLGMG---------MLSYPNIVATYGR---GYT- 231
Query: 231 GSYDAYATAYPGYDYSAMG 249
G +Y+ +PG+ +A G
Sbjct: 232 GFAPSYSYQFPGFPATAYG 250
>gi|119618593|gb|EAW98187.1| musashi homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 343
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 127/237 (53%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ A Y + +Y PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQATTY-----ASRSYTGLAPGYTY 241
>gi|432899438|ref|XP_004076558.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Oryzias latipes]
Length = 328
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 132/259 (50%), Gaps = 25/259 (9%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G+ ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF
Sbjct: 6 SQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFG 65
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQD 116
FVT+T +VD +LA H + K IDPK R ++ KIFVGGL+ +D
Sbjct: 66 FVTFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVED 125
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKE 170
V+ YF Q+G + + FDK+ N +GF FI+F+ +++ ++V + N K V C K+
Sbjct: 126 VKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMVEC-KK 184
Query: 171 VDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTA 230
K V F P T G G A + G +++YP+ A Y GYT
Sbjct: 185 AQPKEVMFPPGTRGRARGLPYTMDAFMLGMG---------MLSYPNIVATYGR---GYT- 231
Query: 231 GSYDAYATAYPGYDYSAMG 249
G +Y+ +PG+ +A G
Sbjct: 232 GFAPSYSYQFPGFPATAYG 250
>gi|433344|gb|AAC50056.1| p37 AUF1 [Homo sapiens]
Length = 286
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 117/217 (53%), Gaps = 13/217 (5%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 68 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 127
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 128 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 186
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE----- 181
+ + P D N ++GFCFI+F ++ ++++ + + ++K V + E
Sbjct: 187 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIK-VAMSKEQYQQQ 245
Query: 182 ----TMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAY 214
+ G +G RG S AG P + +
Sbjct: 246 QQWGSRGGFAGRARGEFRNSSEAGEGLELPPNSIHCW 282
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 128/261 (49%), Gaps = 51/261 (19%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
++GT+ ND K+F+GGL T + +YFS++GEV + D T +SRGF F+T
Sbjct: 9 SSGTSNEIPNDPGKMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFIT 68
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC---KIFVGGLTTEITEQDVRDY 120
+ +V+ +LA H + KKIDPK KR +P KIFVGGL+ T D++++
Sbjct: 69 FRDPASVEKVLAQAAHELDQKKIDPKVAFPKRSHPKVTRTKKIFVGGLSANTTADDIKNH 128
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
FSQYG + E Q FDK N +GF F++FD ++V D++ + N K V C K+ K
Sbjct: 129 FSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDKICEIHFHEVNSKMVEC-KKAQPK 187
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYD 234
V F +GA AR P YP +A
Sbjct: 188 EVMF------------QGALAR----------DPTYFAVYPPNFA--------------- 210
Query: 235 AYATAYPGYDYSAMGYAYPAP 255
AY +PGY A G+AYP P
Sbjct: 211 AYGRGFPGY---APGFAYPFP 228
>gi|403281821|ref|XP_003932373.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
++ + P + K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT
Sbjct: 9 SSNLSSPTYHPSSKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 68
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRD 119
+ Q VD +LA H + +K IDPK R ++ KIFVGGL+ T +DV+
Sbjct: 69 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQ 128
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFN 179
YF Q+G + + FDK+ N +GF F++F+ +++ ++V + I K V+ K+ +
Sbjct: 129 YFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ-- 186
Query: 180 PETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATA 239
P+ + S +G+ RG + A+ G ++ YP G+ A +Y + +
Sbjct: 187 PKEVMSPTGSARGRSRVMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS-- 232
Query: 240 YPGYDYSAMGYAYPAPAVQTMDTPL 264
Y A GY Y P + TPL
Sbjct: 233 ---YTGLAPGYTYQFPEFRVERTPL 254
>gi|281353447|gb|EFB29031.1| hypothetical protein PANDA_013362 [Ailuropoda melanoleuca]
Length = 316
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 102/159 (64%), Gaps = 2/159 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 54 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLD 113
Query: 77 AGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 114 QKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMD 172
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 173 PKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 211
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 127/237 (53%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ A Y + +Y PGY Y
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQATTY-----ASRSYTGLAPGYTY 241
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 24/256 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ A +Y + + Y A
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS-----YTGLAP 237
Query: 249 GYAYPAPAVQTMDTPL 264
GY Y P + TPL
Sbjct: 238 GYTYQFPEFRVERTPL 253
>gi|148233348|ref|NP_001084040.1| musashi RNA-binding protein 1 [Xenopus laevis]
gi|214630|gb|AAA49919.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
Length = 347
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 132/256 (51%), Gaps = 24/256 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YFS +G+V+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ +++ I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+VRG + A+ G ++ YP G+ AA Y A Y A
Sbjct: 195 SVRGRSRVMPYGMDAFMLGIG-MLGYP----GFQAATY------------ASRSYTGIAP 237
Query: 249 GYAYPAPAVQTMDTPL 264
GY Y P + TPL
Sbjct: 238 GYTYQFPEFRVERTPL 253
>gi|54647597|gb|AAH84959.1| Msi1h protein [Xenopus laevis]
Length = 321
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 128/237 (54%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YFS +G+V+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ +++ I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+VRG + A+ G ++ YP G+ AA Y + +Y PGY Y
Sbjct: 195 SVRGRSRVMPYGMDAFMLGIG-MLGYP----GFQAATY-----ASRSYTGIAPGYTY 241
>gi|426232266|ref|XP_004010154.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Ovis aries]
Length = 421
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 155 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 214
Query: 69 KAVDDLLAAGDHYIGNKKIDPKR--VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 215 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 273
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 274 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 307
>gi|348584450|ref|XP_003477985.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cavia
porcellus]
Length = 366
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 131/252 (51%), Gaps = 24/252 (9%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA
Sbjct: 25 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 84
Query: 78 GDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G + +
Sbjct: 85 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 144
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRG 192
FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG
Sbjct: 145 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARG 202
Query: 193 AGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAY 252
+ A+ G ++ YP G+ A +Y + + Y A GY Y
Sbjct: 203 RSRVMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS-----YTGLAPGYTY 245
Query: 253 PAPAVQTMDTPL 264
P + TPL
Sbjct: 246 QFPEFRVERTPL 257
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 113 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 172
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 173 IHFHEINNKMVECKK 187
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 6/209 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + DYF +YG++ + DP T +SRGF FVT++ +VD
Sbjct: 26 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + KK+DPK +R +P KIFVGGL+ T +DV+ YF Q+G I
Sbjct: 86 VLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 145
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK N +GF F++F ++V D+V + I K V+ K+ + E M +
Sbjct: 146 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPK-EVMLPANL 204
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPST 217
A A R + AGAA P A P+T
Sbjct: 205 AKTRAAGRSAYAGAAPGLLPLANPAPPAT 233
>gi|293334069|ref|NP_001168848.1| uncharacterized protein LOC100382653 [Zea mays]
gi|392351175|ref|XP_003750865.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
2 [Rattus norvegicus]
gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|149052496|gb|EDM04313.1| rCG34663, isoform CRA_a [Rattus norvegicus]
gi|223973327|gb|ACN30851.1| unknown [Zea mays]
Length = 332
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 66 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 125
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGE 184
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIK 232
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 128/237 (54%), Gaps = 12/237 (5%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ND K+F+GGL T + + DYF ++GEV + DP T ++RGF F+T+ +V
Sbjct: 39 GCNDPGKMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFADPASV 98
Query: 72 DDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+ +LA H + KKIDPK KR P K+F+GGL+ T +D+R+YF QYG
Sbjct: 99 EKVLAHDQHELDGKKIDPKVAFPKRAQPKMIIKTKKVFIGGLSATSTLEDMRNYFEQYGK 158
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
+ + FDK+ +GF FI+FD+ +V+D+V + I GK V+ K+ + P+ V
Sbjct: 159 VEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQ--PK---EV 213
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPS--TYAGYAAADYGYTAGSYDAYATAYP 241
V+ +R ++A Y P +++AY S G A+ Y G ++ + + P
Sbjct: 214 MLPVQLNKSRAAAARNLYGLGPEQLLAYASYLPRLGTYGANMLYPGGFFNGFQSYAP 270
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 98/166 (59%), Gaps = 6/166 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E + +Y+S++GE+ + DPY+ +SRGF FVTY + VD +A
Sbjct: 23 RKLFIGGLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADSQMVDQAMA 82
Query: 77 AGDHYIGNKKIDPKRVTKR------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
H I N+ ++PKR R N K+FVGGL+TE +D+R+YF +YGSI E
Sbjct: 83 QRPHIIDNRTVEPKRAIPREQSSGDTNMSVKKLFVGGLSTETEAEDLRNYFGKYGSIEEV 142
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
++ K+GF F++FDD + D+V+ +I GK +VK+
Sbjct: 143 IIATERDTGRKRGFGFVTFDDYDSVDKVVLQRHHMIKGKRTEVKKA 188
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+KLFVGGL T +++ +YF +YG +E + I + TG+ RGF FVT+ +VD ++
Sbjct: 113 KKLFVGGLSTETEAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVL 172
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKCK 102
H I K+ + K+ ++ K K
Sbjct: 173 QRHHMIKGKRTEVKKALSKIEMEKAK 198
>gi|301753349|ref|XP_002912535.1| PREDICTED: hypothetical protein LOC100472152 [Ailuropoda
melanoleuca]
Length = 642
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 376 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 435
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 436 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 494
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 495 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 528
>gi|140971918|ref|NP_112620.2| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus]
gi|392351173|ref|XP_003750864.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like isoform
1 [Rattus norvegicus]
gi|6911221|gb|AAF31437.1|AF216753_1 CArG-binding factor A [Rattus norvegicus]
gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein [Rattus norvegicus]
gi|44890256|gb|AAH66664.1| Hnrpab protein [Rattus norvegicus]
gi|149052497|gb|EDM04314.1| rCG34663, isoform CRA_b [Rattus norvegicus]
Length = 285
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 66 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 125
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGE 184
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIK 232
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 130/237 (54%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF ++GEV+ + DP T +SRGF FVTY Q V+
Sbjct: 19 HDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEK 78
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 79 VLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVD 138
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + + +G
Sbjct: 139 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMTPTG 196
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ A YT+ SY A PGY Y
Sbjct: 197 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQTAT--YTSRSYSGIA---PGYTY 243
>gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus]
Length = 311
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 66 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 125
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGE 184
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIK 232
>gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus]
gi|148701715|gb|EDL33662.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Mus
musculus]
Length = 276
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 66 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 125
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGE 184
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIK 232
>gi|395542045|ref|XP_003772945.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Sarcophilus harrisii]
Length = 475
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+ D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV + +VD
Sbjct: 199 QQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVD 258
Query: 73 DLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G I
Sbjct: 259 KVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFGEIENI 317
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ P D N ++GFCFI++ D+ ++L+N I + ++K
Sbjct: 318 ELPMDTKTNERRGFCFITYTDEEPVKKLLENRYHQIGSGKCEIK 361
>gi|74225210|dbj|BAE38291.1| unnamed protein product [Mus musculus]
Length = 325
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 59 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 118
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G
Sbjct: 119 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGE 177
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 178 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIK 225
>gi|146260280|ref|NP_001041526.1| heterogeneous nuclear ribonucleoprotein A/B isoform 1 [Mus
musculus]
gi|89275690|gb|ABD66224.1| S1 protein C2 [Mus musculus]
gi|148701714|gb|EDL33661.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Mus
musculus]
Length = 332
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 66 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 125
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGE 184
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIK 232
>gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B isoform 2 [Mus
musculus]
gi|729000|sp|Q99020.1|ROAA_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=CArG-binding factor-A;
Short=CBF-A
gi|220363|dbj|BAA14181.1| CArG-binding factor-A [Mus musculus]
gi|840648|gb|AAA92146.1| CArG box-binding factor [Mus musculus]
gi|12850708|dbj|BAB28821.1| unnamed protein product [Mus musculus]
gi|89275692|gb|ABD66225.1| S1 protein D2 [Mus musculus]
gi|148701716|gb|EDL33663.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_c [Mus
musculus]
Length = 285
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 66 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 125
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGE 184
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIK 232
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 66 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 125
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G
Sbjct: 126 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGE 184
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 185 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIK 232
>gi|291387921|ref|XP_002710458.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Oryctolagus
cuniculus]
Length = 306
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +
Sbjct: 42 DAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDATSVEKV 101
Query: 75 LAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P
Sbjct: 102 LDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELP 160
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
D N ++GF FI+F +++ +VL+ I G + ++K
Sbjct: 161 MDPKSNKRRGFVFITFKEEDPVKKVLEKKFHTISGSKCEIK 201
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 15/234 (6%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
+G+A ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+
Sbjct: 10 SGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF 69
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDY 120
+VD +L H + +K IDPK +R P KIFVGGL+ +DV+ Y
Sbjct: 70 ADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQY 129
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
F Q+G + + FDK+ N +GF F++F++++V ++V + N K V C K+ K
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPK 188
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
V F P T G G A + G P V Y Y G+A + YGY
Sbjct: 189 EVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 239
>gi|213513574|ref|NP_001133787.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
gi|209155330|gb|ACI33897.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
Length = 366
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 132/262 (50%), Gaps = 20/262 (7%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
+G+ ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+
Sbjct: 10 SGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF 69
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDY 120
+VD +LA H + +K IDPK +R P KIFVGGL+ +DV+ Y
Sbjct: 70 ADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQY 129
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
F Q+G + + FDK+ N +GF FI+F+ ++V ++V + N K V C K+ K
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEKVCEIHFHEINNKMVEC-KKAQPK 188
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYA---GY----AAADYG 227
V F P T G G A + G P + P+ Y+ GY A G
Sbjct: 189 EVMFPPGTRGRARGLPYTMDAFMLGMGMLSEYGPTLLQHSPAHYSVPHGYPNIVATYGRG 248
Query: 228 YTAGSYDAYATAYPGYDYSAMG 249
YT G +Y+ +PG+ +A G
Sbjct: 249 YT-GFTPSYSYQFPGFPATAYG 269
>gi|71896513|ref|NP_001025523.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus (Silurana)
tropicalis]
gi|52355236|gb|AAU44811.1| AUF1 [Xenopus (Silurana) tropicalis]
Length = 295
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV + + VD +
Sbjct: 36 DEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKV 95
Query: 75 LAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G I +
Sbjct: 96 MEQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGTFGEIEAIEL 154
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK 160
P D N ++GFCFI+F +++ ++++
Sbjct: 155 PMDNKTNKRRGFCFITFKEEDPVKKIME 182
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G G ++ K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K
Sbjct: 101 GTGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPK 160
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V+ ++ +HY+ K IDPKR R K KIFVGG++ E E D +++F+Q+G +
Sbjct: 161 TVNTVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVI 219
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + + L P + ICGK ++VK+ +
Sbjct: 220 DATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLE-ICGKPIEVKKAQ 267
>gi|4378711|gb|AAD19638.1| nucleic acid binding factor pRM10 [Rattus norvegicus]
Length = 298
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 79 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 138
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G
Sbjct: 139 SSSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGE 197
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 198 IEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIK 245
>gi|126330931|ref|XP_001362287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Monodelphis
domestica]
Length = 417
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 136 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 195
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 196 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 254
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L+N I + ++K
Sbjct: 255 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLENRYHQIGSGKCEIK 303
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G G ++ K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K
Sbjct: 101 GTGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPK 160
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V+ ++ +HY+ K IDPKR R K KIFVGG++ E E D +++F+Q+G +
Sbjct: 161 TVNTVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVI 219
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + + L P + ICGK ++VK+ +
Sbjct: 220 DATLMIDKDTGRPRGFGFVTFDSEAAVEAALSGPLE-ICGKPIEVKKAQ 267
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 15/234 (6%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
+G+A ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+
Sbjct: 10 SGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF 69
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDY 120
+VD +L H + +K IDPK +R P KIFVGGL+ +DV+ Y
Sbjct: 70 ADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQY 129
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
F Q+G + + FDK+ N +GF F++F++++V ++V + N K V C K+ K
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPK 188
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
V F P T G G A + G P V Y Y G+A + YGY
Sbjct: 189 EVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 239
>gi|113931574|ref|NP_001039236.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
gi|89272441|emb|CAJ82657.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
Length = 313
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A G D K+FVGGL +T +K++ DYFS++GEV +IK DP TG+SRGF F+ +
Sbjct: 43 NASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKD 102
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+VD +L +H + + IDPK+ + + +P+K KIFVGGL E E +R+YF +G
Sbjct: 103 AASVDKVLEQKEHRLDGRLIDPKKAMAMKKDPIK-KIFVGGLNPEAGEDKIREYFETFGE 161
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ ++L+ + G + ++K
Sbjct: 162 IEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIK 209
>gi|417410064|gb|JAA51513.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 360
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 99/155 (63%), Gaps = 4/155 (2%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 144 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 203
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 204 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 262
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P DK+ N ++GFCFI+F ++ ++++
Sbjct: 263 VESIELPMDKT-NKRRGFCFITFKEEEPVKKIMEK 296
>gi|426229395|ref|XP_004008776.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Ovis aries]
Length = 332
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 180 IEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 227
>gi|431916163|gb|ELK16415.1| Heterogeneous nuclear ribonucleoprotein D0 [Pteropus alecto]
Length = 334
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 70 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 129
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 130 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 188
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 222
>gi|393912245|gb|EJD76653.1| musashi [Loa loa]
Length = 336
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 129/239 (53%), Gaps = 12/239 (5%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G ND K+F+GGL T + + DYF ++GEV + DP T ++RGF F+T+T
Sbjct: 23 GTSSNDPGKMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTDPA 82
Query: 70 AVDDLLAAGDHYIGNKKID-----PKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
+VD +LA H + KKID PK+ ++ K+F+GGL+ T +D+++YF QY
Sbjct: 83 SVDKVLAQELHELDGKKIDPKVAFPKKAQSKMIIKTKKVFIGGLSATSTLEDMKNYFEQY 142
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMG 184
G + + FDK+ +GF FI+FD+ +V+D+V + I GK V+ K+ + P+
Sbjct: 143 GKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCEIHFHEINGKMVECKKAQ--PK--- 197
Query: 185 SVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTY--AGYAAADYGYTAGSYDAYATAYP 241
V V+ +R ++A + Y P +++AY S G Y+ G ++ + + P
Sbjct: 198 EVMLPVQLNKSRAAAARSLYGLGPEQLLAYASCLPRLGTYGTSMFYSGGIFNGFQSYAP 256
>gi|395542043|ref|XP_003772944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Sarcophilus
harrisii]
Length = 306
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 40 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 99
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 100 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 158
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 159 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 192
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 15/234 (6%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
+G+A ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+
Sbjct: 10 SGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF 69
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDY 120
+VD +L H + +K IDPK +R P KIFVGGL+ +DV+ Y
Sbjct: 70 ADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQY 129
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
F Q+G + + FDK+ N +GF F++F++++V ++V + N K V C K+ K
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPK 188
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
V F P T G G A + G P V Y Y G+A + YGY
Sbjct: 189 EVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 239
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 15/234 (6%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
+G+A ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+
Sbjct: 10 SGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF 69
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDY 120
+VD +L H + +K IDPK +R P KIFVGGL+ +DV+ Y
Sbjct: 70 ADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQY 129
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
F Q+G + + FDK+ N +GF F++F++++V ++V + N K V C K+ K
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPK 188
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
V F P T G G A + G P V Y Y G+A + YGY
Sbjct: 189 EVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 239
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 102/170 (60%), Gaps = 3/170 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
+G G ++ K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+
Sbjct: 94 SGIGIKEDGKMFIGGLNWETTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDP 153
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSI 127
K V +++ +HY+ K IDPKR R K KIFVGG++ E TEQD + +F Q+G +
Sbjct: 154 KTV-NIVMVKEHYLDGKIIDPKRAIPREEQEKTAKIFVGGVSQEATEQDFKSFFEQFGRV 212
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + D L+ P I GK ++VKR +
Sbjct: 213 IDATLMMDKDTGRPRGFGFVTFDGEAAVDACLQGPL-AILGKPIEVKRAQ 261
>gi|181914|gb|AAA35781.1| DNA-binding protein [Homo sapiens]
Length = 328
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 124/234 (52%), Gaps = 14/234 (5%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 68 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 127
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 128 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 186
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE----- 181
+ + P D N ++G CFI+F ++ ++++ + + ++K V + E
Sbjct: 187 VESIELPMDNKTNKRRGLCFITFKEEEPVKKIMEKKYHNVGLSKCEIK-VAMSKEQYQQQ 245
Query: 182 ----TMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAG 231
+ G +G RG G S + A G +Y Y Y+ + T G
Sbjct: 246 QQWGSRGGFAGRARGRGGDQQSGYGKVSRAGGHQNSY-KPYLNYSICNLSPTGG 298
>gi|162951821|ref|NP_001106165.1| heterogeneous nuclear ribonucleoprotein A/B [Sus scrofa]
gi|160858224|dbj|BAF93845.1| CArG-binding factor A [Sus scrofa]
Length = 302
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 77 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 136
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 137 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 195
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 196 IEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 243
>gi|119614918|gb|EAW94512.1| musashi homolog 2 (Drosophila), isoform CRA_g [Homo sapiens]
Length = 255
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 122/240 (50%), Gaps = 15/240 (6%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
+G+A ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT
Sbjct: 9 TSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVT 68
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRD 119
+ +VD +L H + +K IDPK R ++ KIFVGGL+ +DV+
Sbjct: 69 FADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQ 128
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDV 173
YF Q+G + + FDK+ N +GF F++F++++V ++V + N K V C K+
Sbjct: 129 YFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQP 187
Query: 174 KRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSY 233
K V F P T G G A + G P V Y Y G+A + YGY Y
Sbjct: 188 KEVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGYQFPDY 244
>gi|395834195|ref|XP_003790097.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Otolemur garnettii]
Length = 336
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 70 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 129
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 130 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 188
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 222
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 15/234 (6%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
+G+A ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+
Sbjct: 10 SGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF 69
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDY 120
+VD +L H + +K IDPK +R P KIFVGGL+ +DV+ Y
Sbjct: 70 ADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQY 129
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
F Q+G + + FDK+ N +GF F++F++++V ++V + N K V C K+ K
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPK 188
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
V F P T G G A + G P V Y Y G+A + YGY
Sbjct: 189 EVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 239
>gi|395833926|ref|XP_003789968.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Otolemur
garnettii]
Length = 341
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 130/251 (51%), Gaps = 24/251 (9%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 79 DHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+G + +
Sbjct: 61 RHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 120
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG
Sbjct: 121 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARGR 178
Query: 194 GARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAYP 253
+ A+ G ++ YP G+ A +Y + + Y A GY Y
Sbjct: 179 SRVMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS-----YTGLAPGYTYQ 221
Query: 254 APAVQTMDTPL 264
P + TPL
Sbjct: 222 FPEFRVERTPL 232
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 88 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 148 IHFHEINNKMVECKK 162
>gi|317419099|emb|CBN81137.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 362
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 129/237 (54%), Gaps = 17/237 (7%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF ++GEV+ + DP T +SRGF FVTY Q V+
Sbjct: 19 HDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEK 78
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 79 VLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVD 138
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + + +G
Sbjct: 139 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMTPTG 196
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ RG + A+ G ++ YP G+ YT+ SY A PGY Y
Sbjct: 197 SARGRSRVMPYGMDAFMLGIG-MLGYP----GFQTTT--YTSRSYSGIA---PGYTY 243
>gi|29124621|gb|AAH48898.1| Heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
Length = 340
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 98/161 (60%), Gaps = 2/161 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A G D K+FVGGL +T +K++ D FS++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 ASKGEEDAGKMFVGGLSWDTSKKDLKDCFSKFGEVTDCTIKMDPNTGRSRGFGFILFKEP 120
Query: 69 KAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
VD +LA +H + ++IDPK+ + + P+K KIFVGGL E TE+ +R+YF +G I
Sbjct: 121 SGVDKVLAQKEHRLDGRQIDPKKAMAMKKEPVK-KIFVGGLNPETTEERIREYFGAFGEI 179
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICG 168
+ P D N ++GF FI+F ++ ++L+ + G
Sbjct: 180 ETIELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHNVSG 220
>gi|119626277|gb|EAX05872.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_a [Homo sapiens]
Length = 377
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Homo sapiens]
gi|332819428|ref|XP_003310368.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735088|ref|XP_003776521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 4
[Pongo abelii]
gi|402869393|ref|XP_003898747.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Papio anubis]
gi|2815614|gb|AAC23476.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|119626279|gb|EAX05874.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626283|gb|EAX05878.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626288|gb|EAX05883.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|158258851|dbj|BAF85396.1| unnamed protein product [Homo sapiens]
gi|380783615|gb|AFE63683.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|383417961|gb|AFH32194.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|384940048|gb|AFI33629.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
Length = 336
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 70 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 129
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 130 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 188
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 222
>gi|417410217|gb|JAA51585.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 379
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 100/155 (64%), Gaps = 4/155 (2%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 163 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 222
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 223 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 281
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P DK+ N ++GFCFI+F ++ ++++
Sbjct: 282 VESIELPMDKT-NKRRGFCFITFKEEEPVKKIMEK 315
>gi|410351153|gb|JAA42180.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 337
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 71 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 130
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 131 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 189
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 190 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 223
>gi|116256518|ref|NP_001070734.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Mus musculus]
gi|148688364|gb|EDL20311.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Mus
musculus]
Length = 336
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 70 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 129
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 130 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 188
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 222
>gi|116256516|ref|NP_001070735.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Mus musculus]
gi|148688365|gb|EDL20312.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Mus
musculus]
Length = 287
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 70 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 129
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 130 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 188
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 223
>gi|426229393|ref|XP_004008775.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Ovis aries]
Length = 285
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 180 IEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 227
>gi|449499935|ref|XP_004175398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 340
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 52 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 111
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 112 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 170
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 171 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 204
>gi|345790931|ref|XP_854252.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Canis lupus
familiaris]
Length = 362
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 132/256 (51%), Gaps = 24/256 (9%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 17 HDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+ +
Sbjct: 77 VLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKVD 136
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G
Sbjct: 137 DAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTG 194
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAM 248
+ RG + A+ G ++ YP G+ A +Y + + Y A
Sbjct: 195 SARGRSRVMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS-----YTGLAP 237
Query: 249 GYAYPAPAVQTMDTPL 264
GY Y P + TPL
Sbjct: 238 GYTYQFPEFRVERTPL 253
>gi|344265339|ref|XP_003404742.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like [Loxodonta africana]
Length = 332
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 ATSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI++ ++ +VL+ + G + ++K
Sbjct: 180 IEAIELPMDPKSNKRRGFVFITYKEEEPVKKVLEKKFHTVSGSKCEIK 227
>gi|51477708|ref|NP_001003810.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Homo sapiens]
gi|332819424|ref|XP_003310366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735086|ref|XP_003776520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pongo abelii]
gi|119626285|gb|EAX05880.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_g [Homo sapiens]
Length = 287
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 70 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 129
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 130 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 188
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 223
>gi|94966849|ref|NP_001035612.1| heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|73587357|gb|AAI02924.1| Heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
gi|296485515|tpg|DAA27630.1| TPA: heterogeneous nuclear ribonucleoprotein A/B [Bos taurus]
Length = 285
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 ATSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 180 IEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 227
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 15/234 (6%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
+G+A ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+
Sbjct: 10 SGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF 69
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDY 120
+VD +L H + +K IDPK +R P KIFVGGL+ +DV+ Y
Sbjct: 70 ADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQY 129
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
F Q+G + + FDK+ N +GF F++F++++V ++V + N K V C K+ K
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPK 188
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
V F P T G G A + G P V Y Y G+A + YGY
Sbjct: 189 EVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 239
>gi|209154614|gb|ACI33539.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 359
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 2/165 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A G +D K+FVGGL +T +K++ DYFS++GEV +IK D TG+SRGF F+ + T
Sbjct: 64 NASKGEDDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFQT 123
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+VD +L +H + ++IDPK+ + + P K KIFVGGL E TE+ +R+YF +G
Sbjct: 124 AASVDKVLEQKEHRLDGRQIDPKKAMAMKKEPAK-KIFVGGLNPEATEETIREYFGTFGE 182
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEV 171
I + P D ++GF FI+F +++ + L+ +CG +V
Sbjct: 183 IESIELPVDPKFKKRRGFIFITFKEESTVKKCLEKKFHNVCGTKV 227
>gi|47087353|ref|NP_998557.1| heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
gi|33416353|gb|AAH55525.1| Heterogeneous nuclear ribonucleoprotein D-like [Danio rerio]
Length = 296
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ DY S++GEV +IK DP TG+SRGF FV +
Sbjct: 21 NASKNQEDDGKMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPLTGRSRGFGFVLFKD 80
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR--VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
++VD +L +H + K IDPKR K P K K+FVGGL+ +ITE+ +R+YF YG
Sbjct: 81 AESVDRVLELTEHKLDGKLIDPKRAKAIKGKEPPK-KVFVGGLSPDITEEQLREYFGVYG 139
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCF++F + ++L+N I + ++K
Sbjct: 140 EIESIELPTDTKTNERRGFCFVTFALEEPVQKLLENRYHQIGSGKCEIK 188
>gi|410292490|gb|JAA24845.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 336
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 70 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 129
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 130 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 188
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 222
>gi|383873338|ref|NP_001244741.1| heterogeneous nuclear ribonucleoprotein A/B [Macaca mulatta]
gi|380787211|gb|AFE65481.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|383409139|gb|AFH27783.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
gi|384940566|gb|AFI33888.1| heterogeneous nuclear ribonucleoprotein A/B isoform a [Macaca
mulatta]
Length = 332
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 227
>gi|354497793|ref|XP_003511003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Cricetulus griseus]
Length = 286
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 20 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 79
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 80 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 138
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 139 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 172
>gi|444723247|gb|ELW63906.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Tupaia
chinensis]
Length = 296
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 42 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 101
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 102 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 160
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 161 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 194
>gi|194390332|dbj|BAG61935.1| unnamed protein product [Homo sapiens]
Length = 303
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 37 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 96
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 97 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 155
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 156 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 189
>gi|402873600|ref|XP_003900659.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Papio
anubis]
Length = 311
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 227
>gi|327265526|ref|XP_003217559.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Anolis
carolinensis]
Length = 367
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 103 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKE 162
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+VD +L +H + + IDPK+ + + +P+K KIFVGGL E E+ +R+YF ++G
Sbjct: 163 AASVDKVLEQKEHKLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEAAEEKIREYFGEFGE 221
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ ++L+ + G + ++K
Sbjct: 222 IEAIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVSGSKCEIK 269
>gi|403263354|ref|XP_003924002.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Saimiri boliviensis boliviensis]
Length = 336
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 70 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 129
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 130 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 188
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 222
>gi|345777448|ref|XP_003431598.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Canis lupus
familiaris]
Length = 353
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 96/146 (65%), Gaps = 2/146 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 120 RKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLD 179
Query: 77 AGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 180 QKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMD 238
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKN 161
N ++GF FI+F ++ +VL+
Sbjct: 239 PKSNKRRGFVFITFKEEEPVKKVLEK 264
>gi|74001707|ref|XP_535627.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Canis lupus familiaris]
Length = 336
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 70 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 129
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 130 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 188
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 222
>gi|224049399|ref|XP_002190694.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Taeniopygia guttata]
gi|449499942|ref|XP_004175399.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 318
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 119/221 (53%), Gaps = 8/221 (3%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 52 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 111
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 112 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 170
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
+ + P D N ++GFCFI+F ++ ++++ + + ++K V + E
Sbjct: 171 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIK-VAMSKEQYQQQ 229
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYG 227
G+R G A + G ++ Y+ Y YG
Sbjct: 230 Q----QWGSRGGFVGRARGRSGGPSQSWNQGYSNYWNQGYG 266
>gi|296196172|ref|XP_002745745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Callithrix jacchus]
Length = 325
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 59 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 118
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 119 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 177
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 178 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 211
>gi|116256512|ref|NP_001070733.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Mus musculus]
gi|33516945|sp|Q60668.2|HNRPD_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|148688367|gb|EDL20314.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Mus
musculus]
Length = 355
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>gi|358336337|dbj|GAA54876.1| heterogeneous nuclear ribonucleoprotein D0 [Clonorchis sinensis]
Length = 395
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 20/214 (9%)
Query: 32 EINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPKR 91
++ DYFS++G+V IK D +TG SRGF FVT ++ V +L +H++ NKKIDPK+
Sbjct: 13 DLRDYFSRWGKVTQCIIKLDRFTGNSRGFGFVTMESEDCVSKVLCVSEHWLNNKKIDPKK 72
Query: 92 VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDD 151
PL+ K+FVGG+ ++TE+ +R+YFS +G + PFD K +K + F+SF
Sbjct: 73 AKPSREPLR-KVFVGGIDPDVTEEQIREYFSSFGKVESLDLPFDAQKGRRKHYIFVSFAT 131
Query: 152 QNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRV 211
+ A + + +Q I G++ DV+ R +R + Y
Sbjct: 132 EAAARKAIALERQEIFGRQCDVR------------VAVTREQASRQKALKQWYG------ 173
Query: 212 VAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ Y GY D+ YD Y + GYDY
Sbjct: 174 -FFDYAYPGYTFGDFANPYSGYDPYVYGFYGYDY 206
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A P R RK+FVGG+ + E++I +YFS +G+VES+ + D G+ + + FV++ T+
Sbjct: 73 AKPSREPLRKVFVGGIDPDVTEEQIREYFSSFGKVESLDLPFDAQKGRRKHYIFVSFATE 132
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKR 95
A +A I ++ D + R
Sbjct: 133 AAARKAIALERQEIFGRQCDVRVAVTR 159
>gi|119626284|gb|EAX05879.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_f [Homo sapiens]
Length = 277
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 60 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 119
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 120 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 178
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 179 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 213
>gi|74001711|ref|XP_857875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 9
[Canis lupus familiaris]
Length = 287
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 70 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 129
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 130 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 188
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 189 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 223
>gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 267
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 1 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 60
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 61 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 119
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 120 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 153
>gi|211826253|gb|AAH11172.2| Hnrnpd protein [Mus musculus]
Length = 351
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 85 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 144
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 145 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 203
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 204 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 237
>gi|395834193|ref|XP_003790096.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Otolemur garnettii]
Length = 355
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>gi|380786855|gb|AFE65303.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|383409141|gb|AFH27784.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
gi|384940568|gb|AFI33889.1| heterogeneous nuclear ribonucleoprotein A/B isoform b [Macaca
mulatta]
Length = 285
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 227
>gi|116256514|ref|NP_031542.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Mus musculus]
gi|29145079|gb|AAH49098.1| Heterogeneous nuclear ribonucleoprotein D [Mus musculus]
gi|148688366|gb|EDL20313.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Mus
musculus]
Length = 306
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>gi|395834191|ref|XP_003790095.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Otolemur garnettii]
Length = 306
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Homo sapiens]
gi|386782249|ref|NP_001247736.1| heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|114594005|ref|XP_001143807.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pan troglodytes]
gi|297673867|ref|XP_002814969.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Pongo abelii]
gi|402869391|ref|XP_003898746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Papio anubis]
gi|13124489|sp|Q14103.1|HNRPD_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|870749|dbj|BAA09525.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815612|gb|AAC23474.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|12803191|gb|AAH02401.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|63990762|gb|AAY40913.1| unknown [Homo sapiens]
gi|119626280|gb|EAX05875.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|119626281|gb|EAX05876.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|123982850|gb|ABM83166.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|123997529|gb|ABM86366.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|355687289|gb|EHH25873.1| Heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|380783619|gb|AFE63685.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|383417965|gb|AFH32196.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|384940052|gb|AFI33631.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
Length = 355
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>gi|410351149|gb|JAA42178.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 356
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 90 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 149
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 150 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 208
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 209 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 242
>gi|397524667|ref|XP_003832310.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Pan paniscus]
Length = 355
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>gi|148878011|gb|AAI46039.1| HNRNPD protein [Bos taurus]
Length = 355
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + DYF +YG++ + DP T +SRGF FVT++ +VD
Sbjct: 26 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + KK+DPK +R +P KIFVGGL+ T +DV+ YF Q+G I
Sbjct: 86 VLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 145
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK N +GF F++F ++V D+V + I K V+ K+ + + +
Sbjct: 146 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLA 205
Query: 189 AVRGAG 194
R AG
Sbjct: 206 KTRAAG 211
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 121/234 (51%), Gaps = 15/234 (6%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
+G+A ++D K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+
Sbjct: 6 SGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTF 65
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDY 120
+VD +L H + +K IDPK R ++ KIFVGGL+ +DV+ Y
Sbjct: 66 ADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQY 125
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
F Q+G + + FDK+ N +GF F++F++++V ++V + N K V C K+ K
Sbjct: 126 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPK 184
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
V F P T G G A + G P V Y Y G+A + YGY
Sbjct: 185 EVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 235
>gi|426344801|ref|XP_004038942.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Gorilla gorilla gorilla]
Length = 291
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 25 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 84
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 85 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 143
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 144 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 177
>gi|334330945|ref|XP_001364005.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Monodelphis domestica]
Length = 376
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 110 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 169
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 170 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 228
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 229 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 262
>gi|410292486|gb|JAA24843.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 355
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>gi|148230364|ref|NP_001091533.1| heterogeneous nuclear ribonucleoprotein D0 [Bos taurus]
gi|146231918|gb|ABQ13034.1| heterogeneous nuclear ribonucleoprotein D [Bos taurus]
gi|296486390|tpg|DAA28503.1| TPA: heterogeneous nuclear ribonucleoprotein D [Bos taurus]
Length = 306
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>gi|351695030|gb|EHA97948.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Heterocephalus
glaber]
Length = 277
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 11 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 70
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 71 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 129
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 130 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 163
>gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Homo sapiens]
gi|114594009|ref|XP_001143722.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pan troglodytes]
gi|395735083|ref|XP_003776519.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pongo abelii]
gi|402869389|ref|XP_003898745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Papio anubis]
gi|870745|dbj|BAA09523.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815613|gb|AAC23475.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|18645125|gb|AAH23977.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|19683928|gb|AAH26015.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|119626282|gb|EAX05877.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626286|gb|EAX05881.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626287|gb|EAX05882.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|208966456|dbj|BAG73242.1| heterogeneous nuclear ribonucleoprotein D [synthetic construct]
gi|380783617|gb|AFE63684.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|383417963|gb|AFH32195.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|384940050|gb|AFI33630.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|410265342|gb|JAA20637.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
gi|410292488|gb|JAA24844.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 306
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>gi|410351151|gb|JAA42179.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 307
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 90 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 149
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 150 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 208
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 209 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 243
>gi|332233349|ref|XP_003265864.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Nomascus leucogenys]
Length = 355
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>gi|440898655|gb|ELR50103.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Bos grunniens
mutus]
Length = 277
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 11 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 70
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 71 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 129
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 130 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 163
>gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus]
Length = 358
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 123/234 (52%), Gaps = 14/234 (5%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE----- 181
+ + P D N ++GFCFI+F + ++++ + + ++K V + E
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKGEEPVKKIMEKKYHNVGLSKCEIK-VAMSKEQYQQQ 266
Query: 182 ----TMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAG 231
+ G +G RG G S + G +Y Y Y+ + T G
Sbjct: 267 QQWGSRGGFAGRARGRGGDQQSGYGKVSRRGGHQNSY-KPYLNYSICNLSPTGG 319
>gi|47086935|ref|NP_998467.1| heterogeneous nuclear ribonucleoprotein A/B [Danio rerio]
gi|44890703|gb|AAH66681.1| Zgc:77052 [Danio rerio]
Length = 309
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 101/161 (62%), Gaps = 2/161 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+FVGGL +T +K++ DYFS++GEV +IK D TG+SRGF F+ + +VD +
Sbjct: 43 DAGKMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRV 102
Query: 75 LAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
L +H + ++IDPKR + + P+K KIFVGGL E TE+ +R+YF +G I + P
Sbjct: 103 LQQKEHRLDGRQIDPKRAMAIKKEPVK-KIFVGGLNPETTEEKIREYFGSFGEIETIELP 161
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
D + ++GF FI+F ++ ++L+ +CG + ++K
Sbjct: 162 TDPKTSKRRGFVFITFKEEFAVKKILEKKYHNVCGSKCEIK 202
>gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens]
Length = 298
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 81 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 140
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 141 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 199
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 200 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 234
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 112/189 (59%), Gaps = 7/189 (3%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T + + +YFS++G++ + + DP T +SRGF FVT++ +VD
Sbjct: 48 HDPGKMFIGGLSWQTAPEGLREYFSKFGDITEVMVMKDPSTRRSRGFGFVTFSDPASVDK 107
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA G H + KKIDPK KR +P K+FVGGL+ T +DV++YF Q+G I
Sbjct: 108 VLANGPHELDGKKIDPKIAFPKRAHPKMVTRTKKVFVGGLSAPTTLEDVKNYFQQFGRIE 167
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK N +GF F++F++++V D+V + I K V+ K+ + P+ + +
Sbjct: 168 DAMLMFDKQTNRHRGFGFVTFENEDVVDKVCEIHFHEINNKMVECKKAQ--PKEVMMPNN 225
Query: 189 AVRGAGARV 197
RG GA +
Sbjct: 226 VARGRGAEL 234
>gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken
Length = 353
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 81 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKE 140
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 141 PGSVEKVLEQKEHRLDGRLIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 199
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 200 IEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIK 247
>gi|410957357|ref|XP_003985295.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Felis catus]
Length = 290
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 24 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 83
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 84 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 142
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 143 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 176
>gi|66911597|gb|AAH97855.1| LOC496375 protein [Xenopus laevis]
Length = 286
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 94/148 (63%), Gaps = 3/148 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV + + VD +
Sbjct: 27 DEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKV 86
Query: 75 LAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ +H + K IDPKR K P+K KIFVGGL+ + E +R+YF +G + +
Sbjct: 87 MEQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEDKIREYFGTFGEVEAIEL 145
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK 160
P D N ++GFCFI+F +++ +++
Sbjct: 146 PMDNKTNKRRGFCFITFKEEDPVKNIME 173
>gi|387016396|gb|AFJ50317.1| Heterogeneous nuclear ribonucleoprotein D0 isoform b [Crotalus
adamanteus]
Length = 330
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 96/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+FVGGL +T +K++ DYF+++GEV ++K DP TG+SRGF FV +
Sbjct: 64 ASKNEEDEGKMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFVLFKES 123
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++V+ + +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 124 ESVEKVTDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 182
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F D+ ++++
Sbjct: 183 VESIELPMDNKTNKRRGFCFITFKDEEAVKKIME 216
>gi|74001715|ref|XP_857957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 11
[Canis lupus familiaris]
Length = 355
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>gi|62898411|dbj|BAD97145.1| heterogeneous nuclear ribonucleoprotein AB isoform a variant [Homo
sapiens]
Length = 332
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 227
>gi|410920299|ref|XP_003973621.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 350
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 110/184 (59%), Gaps = 7/184 (3%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF ++GEV+ + DP T +SRGF FVTYT Q V+
Sbjct: 19 HDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEK 78
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 79 VLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVD 138
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + + +G
Sbjct: 139 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMTPTG 196
Query: 189 AVRG 192
+ RG
Sbjct: 197 SARG 200
>gi|410225700|gb|JAA10069.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260870|gb|JAA18401.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299218|gb|JAA28209.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 227
>gi|355765936|gb|EHH62474.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Macaca
fascicularis]
Length = 302
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 36 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 95
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 96 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 154
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 155 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 188
>gi|148227150|ref|NP_001088992.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus laevis]
gi|52082714|gb|AAU25946.1| p37 AUF1 [Xenopus laevis]
Length = 295
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 94/148 (63%), Gaps = 3/148 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV + + VD +
Sbjct: 36 DEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKV 95
Query: 75 LAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+ +H + K IDPKR K P+K KIFVGGL+ + E +R+YF +G + +
Sbjct: 96 MEQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEDKIREYFGTFGEVEAIEL 154
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK 160
P D N ++GFCFI+F +++ +++
Sbjct: 155 PMDNKTNKRRGFCFITFKEEDPVKNIME 182
>gi|55956919|ref|NP_112556.2| heterogeneous nuclear ribonucleoprotein A/B isoform a [Homo
sapiens]
gi|426351244|ref|XP_004043165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 1
[Gorilla gorilla gorilla]
gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens]
gi|33874222|gb|AAH36708.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574227|gb|EAW53842.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_a [Homo
sapiens]
Length = 332
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 227
>gi|403263352|ref|XP_003924001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Saimiri boliviensis boliviensis]
Length = 355
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 241
>gi|348551765|ref|XP_003461700.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Cavia
porcellus]
Length = 327
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF +G
Sbjct: 121 ATSVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGDFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 227
>gi|395861189|ref|XP_003802876.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Otolemur
garnettii]
Length = 332
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 102/168 (60%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF +G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGDFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 227
>gi|74001695|ref|XP_848950.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Canis lupus familiaris]
Length = 306
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 132/255 (51%), Gaps = 25/255 (9%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
+G+ ++D K+F+GGL T + DYF ++GE+ + DP T +SRGF F+T+
Sbjct: 10 SGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITF 69
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDY 120
+VD +LA H + +K IDPK +R P KIFVGGL+ +DV+ Y
Sbjct: 70 ADVSSVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSASTVVEDVKQY 129
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
F Q+G + + FDK+ N +GF F++F+++++ ++V + N K V C K+ K
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCEIHFHEINNKMVEC-KKAQPK 188
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYD 234
V F P T RG + A+ G +++YP+ A Y GYT G
Sbjct: 189 EVMFPPGT--------RGRARSLPYTMDAFMLGMG-MLSYPNIVATYGR---GYT-GFSP 235
Query: 235 AYATAYPGYDYSAMG 249
+Y+ +PG+ +A G
Sbjct: 236 SYSYQFPGFPATAYG 250
>gi|403263350|ref|XP_003924000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Saimiri boliviensis boliviensis]
Length = 306
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G G ++ K+F+GGL+ T ++ + +YFSQ+GEV+ ++ D TG+SRGF F+T+ K
Sbjct: 103 GTGIKEDGKMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPK 162
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V+ ++ +HY+ K IDPKR R K KIFVGG++ E TEQD + +F Q+G +
Sbjct: 163 TVNTVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVI 221
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 222 DATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKTIEVKKAQ 269
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 88 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKE 147
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+VD +L +H + + IDPK+ + + +P+K KIFVGGL E TE +R+YF +G
Sbjct: 148 SASVDKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEDKIREYFGDFGE 206
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ ++L+ + G + ++K
Sbjct: 207 IESIELPMDPKTNKRRGFVFITFKEEDPVKKILEKKFHNVGGSKCEIK 254
>gi|332822801|ref|XP_518142.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
troglodytes]
Length = 338
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 67 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 126
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 127 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 185
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 186 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 233
>gi|345327974|ref|XP_001505245.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Ornithorhynchus anatinus]
Length = 306
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 40 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKEA 99
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 100 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 158
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 159 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 192
>gi|148225236|ref|NP_001084027.1| musashi RNA-binding protein 2 [Xenopus laevis]
gi|214936|gb|AAA50004.1| ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 124/251 (49%), Gaps = 15/251 (5%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G+ ++D K+F+GGL T + DYF+++GE+ + DP T +SRGF
Sbjct: 6 SQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFG 65
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQD 116
FVT+ +VD +LA H + +K IDPK +R P KIFVGGL+ +D
Sbjct: 66 FVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVED 125
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKE 170
V+ YF QYG + + FDK+ N +GF F++F+ ++V ++V + N K V C K+
Sbjct: 126 VKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVEC-KK 184
Query: 171 VDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTA 230
K V F P T G G A + G P V Y Y G+A + Y Y
Sbjct: 185 AQPKEVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YSYQF 241
Query: 231 GSYDAYATAYP 241
+ A T P
Sbjct: 242 PGFPAATTYGP 252
>gi|194387362|dbj|BAG60045.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 52 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 111
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 112 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 170
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 171 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 218
>gi|410920297|ref|XP_003973620.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 331
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 110/184 (59%), Gaps = 7/184 (3%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GGL T ++ + +YF ++GEV+ + DP T +SRGF FVTYT Q V+
Sbjct: 19 HDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEK 78
Query: 74 LLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+LA H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 79 VLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVD 138
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + + +G
Sbjct: 139 DAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMTPTG 196
Query: 189 AVRG 192
+ RG
Sbjct: 197 SARG 200
>gi|55956921|ref|NP_004490.2| heterogeneous nuclear ribonucleoprotein A/B isoform b [Homo
sapiens]
gi|426351246|ref|XP_004043166.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B isoform 2
[Gorilla gorilla gorilla]
gi|12803583|gb|AAH02625.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13528732|gb|AAH04561.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|13905354|gb|AAH01616.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|14424683|gb|AAH09359.1| Heterogeneous nuclear ribonucleoprotein A/B [Homo sapiens]
gi|119574228|gb|EAW53843.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574229|gb|EAW53844.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|119574230|gb|EAW53845.1| heterogeneous nuclear ribonucleoprotein A/B, isoform CRA_b [Homo
sapiens]
gi|193786114|dbj|BAG51397.1| unnamed protein product [Homo sapiens]
gi|208966452|dbj|BAG73240.1| heterogeneous nuclear ribonucleoprotein A/B [synthetic construct]
Length = 285
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 227
>gi|410225698|gb|JAA10068.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410260868|gb|JAA18400.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
gi|410299216|gb|JAA28208.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 103/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 227
>gi|395834185|ref|XP_003790092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Otolemur garnettii]
gi|395834187|ref|XP_003790093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Otolemur garnettii]
Length = 418
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|45384514|ref|NP_990659.1| heterogeneous nuclear ribonucleoprotein A/B [Gallus gallus]
gi|515838|emb|CAA56586.1| single stranded D box binding factor [Gallus gallus]
Length = 302
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 104/168 (61%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 81 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKE 140
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 141 PGSVEKVLEQKEHRLDGRLIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 199
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 200 IEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIK 247
>gi|440898381|gb|ELR49895.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Bos grunniens
mutus]
Length = 262
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 78 GDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 61 KEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 120 KSNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 157
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF ++GE+E+I + DP + + RGF F+T+ ++ V +L
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 143
Query: 77 AGDHYIGNKKIDPK 90
H I K + K
Sbjct: 144 KKFHTISGSKCEIK 157
>gi|213623508|gb|AAI69841.1| Ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/248 (33%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +G+ ++D K+F+GGL T + DYF+++GE+ + DP T +SRGF
Sbjct: 6 SQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFG 65
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQD 116
FVT+ +VD +LA H + +K IDPK +R P KIFVGGL+ +D
Sbjct: 66 FVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVED 125
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKE 170
V+ YF QYG + + FDK+ N +GF F++F+ ++V ++V + N K V C K+
Sbjct: 126 VKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVEC-KK 184
Query: 171 VDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTA 230
K V F P T G G A + G P V Y Y G+A + Y Y
Sbjct: 185 AQPKEVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YSYQF 241
Query: 231 GSYDAYAT 238
+ A T
Sbjct: 242 PGFPAATT 249
>gi|417399538|gb|JAA46770.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 354
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 100/154 (64%), Gaps = 4/154 (2%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 89 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 148
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 149 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 207
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P DK+ N ++GFCFI+F ++ ++++
Sbjct: 208 VESIELPMDKT-NKRRGFCFITFKEEEPVKKIME 240
>gi|417409283|gb|JAA51156.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 279
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 100/154 (64%), Gaps = 4/154 (2%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 14 AAAAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 73
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 74 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 132
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P DK+ N ++GFCFI+F ++ ++++
Sbjct: 133 VESIELPMDKT-NKRRGFCFITFKEEEPVKKIME 165
>gi|395834189|ref|XP_003790094.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Otolemur garnettii]
Length = 363
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G G ++ K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K
Sbjct: 92 GTGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPK 151
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V+ ++ +HY+ K IDPKR R K KIFVGG++ E EQD + +F Q+G +
Sbjct: 152 TVNTVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVV 210
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 211 DATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEVKKAQ 258
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G G ++ K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K
Sbjct: 104 GTGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPK 163
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V+ ++ +HY+ K IDPKR R K KIFVGG++ E EQD + +F Q+G +
Sbjct: 164 TVNTVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVV 222
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 223 DATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEVKKAQ 270
>gi|550458|gb|AAA68014.1| ribonucleoprotein [Gallus gallus]
gi|1095499|prf||2109229A RNA-binding protein
Length = 285
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F + +V+ +L
Sbjct: 74 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFRLFKEPGSVEKVLEQ 133
Query: 78 GDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 134 KEHRLDGRLIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 192
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FISF +++ +VL+ + G + ++K
Sbjct: 193 KTNKRRGFVFISFKEEDPVKKVLEKKFHNVSGSKCEIK 230
>gi|344284839|ref|XP_003414172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Loxodonta africana]
Length = 363
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|296196170|ref|XP_002745712.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Callithrix jacchus]
gi|390460703|ref|XP_003732527.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 2
[Callithrix jacchus]
Length = 420
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|74001737|ref|XP_858404.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform
12 [Canis lupus familiaris]
Length = 420
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|297673870|ref|XP_002814970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pongo abelii]
gi|332233343|ref|XP_003265861.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Nomascus leucogenys]
gi|395735091|ref|XP_003776522.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pongo abelii]
Length = 420
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|121715226|ref|XP_001275222.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
gi|119403379|gb|EAW13796.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
Length = 466
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E TEQ+ + +F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQEFKGFFMQFGRVVDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P ICGK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVENALSRPL-AICGKPIEVKKAQ 158
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E+E +F Q+G V ++ D TG+ RGF FVT+ ++ AV++ L+
Sbjct: 84 KIFVGGVSQEATEQEFKGFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVENALSR 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
G K I+ K+ R N
Sbjct: 144 PLAICG-KPIEVKKAQPRGN 162
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G G ++ K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K
Sbjct: 104 GTGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPK 163
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V+ ++ +HY+ K IDPKR R K KIFVGG++ E EQD + +F Q+G +
Sbjct: 164 TVNTVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVV 222
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 223 DATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEVKKAQ 270
>gi|148664250|ref|NP_057899.2| heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
Length = 420
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|26350925|dbj|BAC39099.1| unnamed protein product [Mus musculus]
Length = 301
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 123/232 (53%), Gaps = 17/232 (7%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 79 DHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G + +
Sbjct: 61 RHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLM 120
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
FDK+ N +GF F++F+ +++ ++V + I K V+ K K P+ + S +G+ RG
Sbjct: 121 FDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECK--KAQPKEVMSPTGSARGR 178
Query: 194 GARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
+ A+ G ++ YP G+ A Y + +Y PGY Y
Sbjct: 179 SRVMPYGMDAFMLGIG-MLGYP----GFQATTY-----ASRSYTGLAPGYTY 220
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 88 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 148 IHFHEINNKMVECKK 162
>gi|410914854|ref|XP_003970902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 307
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 103/167 (61%), Gaps = 2/167 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A G D K+FVGGL +T +K++ DYF+++GEV +IK D +G+SRGF FV +
Sbjct: 48 ATKGDEDTGKMFVGGLSWDTSKKDLKDYFTKFGEVSDCTIKFDSDSGRSRGFGFVLFKDP 107
Query: 69 KAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
+V+ +L +H + + IDPKR + + P+K KIFVGGL E TE+++R+YF +YG I
Sbjct: 108 SSVEKVLEQKEHRLDGRLIDPKRAMAMKKEPVK-KIFVGGLIPEATEENIREYFGEYGEI 166
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ P D N ++GF FI++ ++ A + L+N I G ++K
Sbjct: 167 ENIELPLDPKSNKRRGFIFITYKEEASAKKCLENKFHTIEGSRCELK 213
>gi|432858970|ref|XP_004069029.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oryzias
latipes]
Length = 299
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 131/256 (51%), Gaps = 24/256 (9%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL T ++ + +YF ++GEV+ + DP T +SRGF FVTY Q V+ +LA
Sbjct: 1 MFIGGLSWQTTQEGLREYFGKFGEVKECMVMRDPVTKRSRGFGFVTYADQAGVEQVLAQN 60
Query: 79 DHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G + +
Sbjct: 61 RHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLM 120
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
FDK+ N +GF F++F++++V ++V + I K V+ K+ + P+ + + +G+ RG
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQ--PKEVMTPTGSARGR 178
Query: 194 GARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAYP 253
+RV G ++ YP G+ YT+ SY A GY Y
Sbjct: 179 -SRVMPYGMDTFMLGIGMLGYP----GFQTTT--YTSRSYSGIAP----------GYTYQ 221
Query: 254 APAVQTMDTPLVVMMH 269
P TPL+ H
Sbjct: 222 FPEFHLERTPLLTSSH 237
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ + V+ +
Sbjct: 88 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 148 IHFHEINNKMVECKK 162
>gi|410957341|ref|XP_003985287.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Felis catus]
gi|410957343|ref|XP_003985288.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Felis catus]
Length = 420
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|386781544|ref|NP_001247638.1| heterogeneous nuclear ribonucleoprotein D-like [Macaca mulatta]
gi|380787105|gb|AFE65428.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|380787107|gb|AFE65429.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
gi|383410015|gb|AFH28221.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Macaca
mulatta]
Length = 420
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|448102174|ref|XP_004199739.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359381161|emb|CCE81620.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ +T E+ + DYFSQ+GEV +I D TG+SRGF F+T+ K+V+++
Sbjct: 159 DHGKMFIGGLNWDTSEQGLVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEV 218
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ DH + K IDPKR R K KIFVGG+ + E++ D+FSQ+GSI + Q
Sbjct: 219 IKR-DHILDGKLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLM 277
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF FI++D + D+V N + GK ++VKR +
Sbjct: 278 IDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAE 321
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ EKE +D+FSQ+G + + D TG+SRGF F+TY + AVD +
Sbjct: 246 KIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVN 305
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 306 KYLTLKGKSMEVKRAEPR 323
>gi|14110407|ref|NP_112740.1| heterogeneous nuclear ribonucleoprotein D-like isoform a [Homo
sapiens]
gi|114593989|ref|XP_001142372.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 4
[Pan troglodytes]
gi|332819433|ref|XP_003310370.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Pan
troglodytes]
gi|397524661|ref|XP_003832307.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan paniscus]
gi|397524663|ref|XP_003832308.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Pan paniscus]
gi|74762096|sp|O14979.3|HNRDL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=AU-rich element RNA-binding factor; AltName:
Full=JKT41-binding protein; AltName: Full=Protein laAUF1
gi|4512254|dbj|BAA75239.1| JKTBP2 [Homo sapiens]
gi|4512257|dbj|BAA75241.1| JKTBP2 [Homo sapiens]
gi|15079822|gb|AAH11714.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|47115183|emb|CAG28551.1| HNRPDL [Homo sapiens]
gi|47938369|gb|AAH71944.1| Heterogeneous nuclear ribonucleoprotein D-like [Homo sapiens]
gi|63990763|gb|AAY40914.1| unknown [Homo sapiens]
gi|119626290|gb|EAX05885.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626291|gb|EAX05886.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626292|gb|EAX05887.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626293|gb|EAX05888.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626294|gb|EAX05889.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|119626296|gb|EAX05891.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_a [Homo
sapiens]
gi|123987254|gb|ABM83797.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|123999068|gb|ABM87118.1| heterogeneous nuclear ribonucleoprotein D-like [synthetic
construct]
gi|410248290|gb|JAA12112.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296200|gb|JAA26700.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339827|gb|JAA38860.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339829|gb|JAA38861.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410339831|gb|JAA38862.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 420
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|344284837|ref|XP_003414171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D isoform 1
[Loxodonta africana]
Length = 420
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|395735093|ref|XP_003776523.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pongo abelii]
gi|441625206|ref|XP_004089054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Nomascus
leucogenys]
Length = 363
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|74001731|ref|XP_858286.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 9
[Canis lupus familiaris]
Length = 363
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|144226849|ref|NP_001077194.1| heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
gi|134024605|gb|AAI34449.1| HNRPDL protein [Bos taurus]
Length = 420
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|359320431|ref|XP_532379.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2 isoform 1 [Canis lupus familiaris]
Length = 328
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 122/234 (52%), Gaps = 15/234 (6%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
+G+A ++D K+F+GGL T + + DYFS++GE+ + +P T +SRGF FVT+
Sbjct: 10 SGSANDSQHDPGKMFIGGLSWQTSPESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTF 69
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDY 120
+VD +L H + +K IDPK +R P KIFVGGL+ +DV+ Y
Sbjct: 70 ADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQY 129
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVK 174
F Q+G + + FDK+ N +GF F++F++++V ++V + N K V C K+ K
Sbjct: 130 FEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPK 188
Query: 175 RVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
V F P T G G A + G P V Y Y G+A + YGY
Sbjct: 189 EVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 239
>gi|296486392|tpg|DAA28505.1| TPA: heterogeneous nuclear ribonucleoprotein D-like [Bos taurus]
Length = 420
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|127139089|ref|NP_001076008.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Rattus
norvegicus]
gi|149046818|gb|EDL99592.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Rattus
norvegicus]
gi|149046819|gb|EDL99593.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Rattus
norvegicus]
Length = 334
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++G+V ++K DP TG+SRGF FV +
Sbjct: 68 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKES 127
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 128 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 186
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 187 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 220
>gi|402869385|ref|XP_003898743.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Papio anubis]
gi|402869387|ref|XP_003898744.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Papio anubis]
Length = 420
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|324501271|gb|ADY40568.1| RNA-binding protein squid [Ascaris suum]
Length = 303
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 99/163 (60%), Gaps = 3/163 (1%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N+++K+FVGG+ + +++ +YFSQ+GEV +K D TG+SRGFAFV + T +A
Sbjct: 35 NEDKKIFVGGIAYDVTNEDLCNYFSQFGEVAQAQVKFDRNTGRSRGFAFVEFATGEACKA 94
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
L + + NK+I+ K R N K+FVGGL + E+D+R +F+QYG + + + P
Sbjct: 95 ALGTREQTLKNKQIEVKPAKSRENK---KVFVGGLPADFPEEDLRAHFAQYGKVEDIEWP 151
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
FDK ++ F FI F+++ AD+ PKQ +E DVK+
Sbjct: 152 FDKQTKARRNFAFIVFEEEESADRASSTPKQTFGSRECDVKKA 194
>gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 215
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 97/151 (64%), Gaps = 3/151 (1%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+ +E K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV + ++VD
Sbjct: 2 QREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVD 61
Query: 73 DLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G +
Sbjct: 62 KVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESI 120
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ P D N ++GFCFI+F ++ ++++
Sbjct: 121 ELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 151
>gi|410957345|ref|XP_003985289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Felis catus]
Length = 363
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|9588098|dbj|BAB03466.1| RNA binding protein p42 AUF1 [Rattus norvegicus]
Length = 334
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++G+V ++K DP TG+SRGF FV +
Sbjct: 68 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKES 127
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 128 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 186
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 187 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 220
>gi|426344793|ref|XP_004038938.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Gorilla gorilla gorilla]
gi|426344795|ref|XP_004038939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 2
[Gorilla gorilla gorilla]
Length = 420
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|39644771|gb|AAH07392.2| HNRPDL protein, partial [Homo sapiens]
Length = 415
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 134 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 193
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 194 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 252
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 253 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 301
>gi|426344797|ref|XP_004038940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Gorilla gorilla gorilla]
Length = 363
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|332801090|ref|NP_001193929.1| heterogeneous nuclear ribonucleoprotein D-like isoform b [Homo
sapiens]
gi|114593993|ref|XP_001142118.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Pan troglodytes]
gi|397524665|ref|XP_003832309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 3
[Pan paniscus]
gi|119626295|gb|EAX05890.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Homo
sapiens]
gi|410248288|gb|JAA12111.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
gi|410296198|gb|JAA26699.1| heterogeneous nuclear ribonucleoprotein D-like [Pan troglodytes]
Length = 363
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 139 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 198
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 199 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 257
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 258 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 306
>gi|449267179|gb|EMC78145.1| Heterogeneous nuclear ribonucleoprotein A/B, partial [Columba
livia]
Length = 263
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQ 60
Query: 78 GDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 61 KEHRLDGRLIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 120 KTNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIK 157
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF ++GE+E+I + DP T + RGF F+T+ + V +L
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 143
Query: 77 AGDHYIGNKKIDPK 90
H + K + K
Sbjct: 144 KKFHNVSGSKCEIK 157
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 115/223 (51%), Gaps = 14/223 (6%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
++D K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD
Sbjct: 16 QHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVD 75
Query: 73 DLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSI 127
+LA H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G +
Sbjct: 76 KVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKV 135
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPE 181
+ FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P
Sbjct: 136 EDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPG 194
Query: 182 TMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAA 224
T G G A + G P V Y Y G+A +
Sbjct: 195 TRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS 235
>gi|296416057|ref|XP_002837697.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633580|emb|CAZ81888.1| unnamed protein product [Tuber melanosporum]
Length = 691
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 100/171 (58%), Gaps = 2/171 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
T P ++ K+F+GGL+ T ++ + +YFSQYGEV ++ D TG+SRGF F+T+
Sbjct: 159 TGSPAIKEDGKMFIGGLNWETTDESLKEYFSQYGEVVECTVMRDGPTGRSRGFGFLTFKD 218
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGS 126
K V +++ +HY+ K IDPKR R K KIFVGG++ E TE D R+YF+Q+G
Sbjct: 219 PKTV-NIVMVKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATETDFREYFTQFGR 277
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ + DK +GF F++FD + + L P I K ++VK+ +
Sbjct: 278 VLDATLMMDKDTGRPRGFGFVTFDSEGAVENALNCPTLAILDKPIEVKKAQ 328
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E + +YF+Q+G V ++ D TG+ RGF FVT+ ++ AV++ L
Sbjct: 253 KIFVGGVSQEATETDFREYFTQFGRVLDATLMMDKDTGRPRGFGFVTFDSEGAVENALNC 312
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
I +K I+ K+ R N
Sbjct: 313 PTLAILDKPIEVKKAQPRGN 332
>gi|410343159|gb|JAA40526.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 332
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKAPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 227
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
++ K+F+GGL+ T E+ + +YFSQ+GEV ++ D TG+SRGF F+T+ K V ++
Sbjct: 103 EDGKMFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCV-NI 161
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ +HY+ K IDPKR R + KIFVGG++ E TE+D ++F Q+G + +
Sbjct: 162 VMVKEHYLDGKIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLM 221
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++FD D L+ P Q++ GK+++VKR +
Sbjct: 222 MDKETGRPRGFGFVTFDGDAAVDATLRAPLQIL-GKQIEVKRAQ 264
>gi|127138754|ref|NP_001076010.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Rattus
norvegicus]
gi|149046820|gb|EDL99594.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Rattus
norvegicus]
Length = 285
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++G+V ++K DP TG+SRGF FV +
Sbjct: 68 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKES 127
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 128 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 186
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 187 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 221
>gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus]
Length = 285
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++G+V ++K DP TG+SRGF FV +
Sbjct: 68 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKES 127
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 128 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 186
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 187 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 221
>gi|354472673|ref|XP_003498562.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Cricetulus griseus]
Length = 243
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 102/158 (64%), Gaps = 2/158 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 4 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 63
Query: 78 GDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G I + P D
Sbjct: 64 KEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDP 122
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI++ +++ +VL+ + G + ++K
Sbjct: 123 KLNKRRGFVFITYKEEDPVKKVLEKKFHTVSGSKCEIK 160
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF Q+GE+E+I + DP + RGF F+TY + V +L
Sbjct: 87 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITYKEEDPVKKVLE 146
Query: 77 AGDHYIGNKKIDPK 90
H + K + K
Sbjct: 147 KKFHTVSGSKCEIK 160
>gi|355691911|gb|EHH27096.1| hypothetical protein EGK_17210, partial [Macaca mulatta]
gi|355750475|gb|EHH54813.1| hypothetical protein EGM_15724, partial [Macaca fascicularis]
Length = 262
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 78 GDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 61 KEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDP 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 120 KLNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 157
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF ++GE+E+I + DP + RGF F+T+ ++ V +L
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 143
Query: 77 AGDHYIGNKKIDPK 90
H I K + K
Sbjct: 144 KKFHTISGSKCEIK 157
>gi|339248325|ref|XP_003375796.1| RNA-binding protein squid [Trichinella spiralis]
gi|316970795|gb|EFV54670.1| RNA-binding protein squid [Trichinella spiralis]
Length = 329
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 121/241 (50%), Gaps = 23/241 (9%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+N+ERK+FVGG+ +T E ++ ++F+Q+G+V + +K D YTG+SRGFAFV + T +A
Sbjct: 54 KNEERKIFVGGISWDTNENDLTNHFNQFGDVVHVQVKYDHYTGRSRGFAFVEFATAEACK 113
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
LA D + KK + K R N K+FVGGL ++ TE+ +R + Q+G + E +
Sbjct: 114 KALAKKDAELKGKKCEVKPAKSRENK---KLFVGGLPSDYTEELLRKHMEQFGRVEEIEW 170
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRG 192
PFDK N +K F FI F+D + A PKQ + DVK P+ M
Sbjct: 171 PFDKVNNKRKNFAFIVFEDDDGAAAAAALPKQRFGDRTCDVKIAV--PQYMRPQK----- 223
Query: 193 AGARVSSAGAAYAAAPGRVVAYPSTYAGYAA-ADYGYTAGSYDAYATAYPGYDYSAMGYA 251
A PG +P Y Y+ + YG AG Y + Y G +G
Sbjct: 224 ------------TAGPGMSQQWPGHYHDYSGYSGYGSNAGHYGYFDDFYGGGSEYGVGNE 271
Query: 252 Y 252
Y
Sbjct: 272 Y 272
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%)
Query: 94 KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQN 153
KR + KIFVGG++ + E D+ ++F+Q+G + Q +D +GF F+ F
Sbjct: 51 KREKNEERKIFVGGISWDTNENDLTNHFNQFGDVVHVQVKYDHYTGRSRGFAFVEFATAE 110
Query: 154 VADQVLKNPKQVICGKEVDVKRVK 177
+ L + GK+ +VK K
Sbjct: 111 ACKKALAKKDAELKGKKCEVKPAK 134
>gi|410343157|gb|JAA40525.1| heterogeneous nuclear ribonucleoprotein A/B [Pan troglodytes]
Length = 285
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 61 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 120
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 121 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKAPVK-KIFVGGLNPEATEEKIREYFGEFGE 179
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 180 IEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 227
>gi|127138710|ref|NP_077380.2| heterogeneous nuclear ribonucleoprotein D0 isoform a [Rattus
norvegicus]
gi|149046816|gb|EDL99590.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Rattus
norvegicus]
Length = 353
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++G+V ++K DP TG+SRGF FV +
Sbjct: 87 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKES 146
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 147 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 205
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 206 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 239
>gi|417410446|gb|JAA51696.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 404
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 123 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 182
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 183 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 241
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 242 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 290
>gi|348535413|ref|XP_003455195.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Oreochromis niloticus]
Length = 316
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/154 (39%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+FVGGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 48 ASKNEEDEGKMFVGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPMTGRSRGFGFVLFKEP 107
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD + + +H + K IDPK+ K P+K KIFVGGL+ + E+ VR+YF +G
Sbjct: 108 ESVDKVASQKEHKLNGKVIDPKKAKAMKSKEPVK-KIFVGGLSPDTPEEKVREYFGAFGE 166
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P + N ++GFCFI+F ++ ++++
Sbjct: 167 VESVELPMENKTNKRRGFCFITFKEEEPVKKIME 200
>gi|13124487|sp|Q9JJ54.1|HNRPD_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|9588096|dbj|BAB03465.1| RNA binding protein p45AUF1 [Rattus norvegicus]
Length = 353
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++G+V ++K DP TG+SRGF FV +
Sbjct: 87 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKES 146
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 147 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 205
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 206 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 239
>gi|189441636|gb|AAI67421.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 254
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A G D K+FVGGL +T +K++ DYFS++GEV +IK DP TG+SRGF F+ +
Sbjct: 43 NASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKD 102
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+VD +L +H + + IDPK+ + + +P+K KIFVGGL E E +R+YF +G
Sbjct: 103 AASVDKVLEQKEHRLDGRLIDPKKAMAMKKDPIK-KIFVGGLNPEAGEDKIREYFETFGE 161
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
I + P D N ++GF FI+F ++ ++L+
Sbjct: 162 IEAIELPMDPKTNKRRGFVFITFKEEEPVKKILE 195
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 47/74 (63%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+FVGGL+ + +++D++DYFS++G +++ D + +GF FI F D D+VL+
Sbjct: 53 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 112
Query: 162 PKQVICGKEVDVKR 175
+ + G+ +D K+
Sbjct: 113 KEHRLDGRLIDPKK 126
>gi|58332392|ref|NP_001011015.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|82234092|sp|Q640A2.1|HNRDL_XENTR RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|52139122|gb|AAH82729.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
gi|89268223|emb|CAJ82429.1| heterogeneous nuclear ribonucleoprotein D-like [Xenopus (Silurana)
tropicalis]
Length = 297
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 132/250 (52%), Gaps = 9/250 (3%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + DE K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 17 NASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 76
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ E TE+ ++ YF +G
Sbjct: 77 AVSVDKVLETKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPETTEEQIKQYFGGFG 135
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGS 185
I + P D N ++GFCF+++ + ++L++ I + ++K + P+ +
Sbjct: 136 EIENIELPMDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIKVAQ--PKEVYR 193
Query: 186 VSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY--TAGSY--DAYATAYP 241
+ G R ++ G A GR + Y+ Y +YG GSY Y +Y
Sbjct: 194 QQQQKQQKGGRGAATGRGGARGRGRGQGWNQGYSNYYDQNYGSYGNNGSYADQGYNNSYS 253
Query: 242 GYDYSAMGYA 251
GYDYS Y
Sbjct: 254 GYDYSGYNYG 263
>gi|148224084|ref|NP_001080489.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus laevis]
gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis]
Length = 324
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 100/158 (63%), Gaps = 2/158 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + ++VD +L
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKVLEH 124
Query: 78 GDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + + IDPK+ + + +P+K KIFVGGL E E +R+YF +G I + P D
Sbjct: 125 KEHRLDGRLIDPKKAMAMKKDPIK-KIFVGGLNPEAGEDQIREYFETFGEIEAIELPMDP 183
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F +++ ++L+ + G + ++K
Sbjct: 184 KTNKRRGFVFITFKEEDPVKKILEKKFHNVSGSKCEIK 221
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ GE +I +YF +GE+E+I + DP T + RGF F+T+ + V +L
Sbjct: 148 KKIFVGGLNPEAGEDQIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKILE 207
Query: 77 AGDHYIGNKKIDPK 90
H + K + K
Sbjct: 208 KKFHNVSGSKCEIK 221
>gi|358367583|dbj|GAA84201.1| heterogeneous nuclear ribonucleoprotein Hrp1 [Aspergillus kawachii
IFO 4308]
Length = 471
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E E D +++F+Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P + ICGK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVEAALSGPLE-ICGKPIEVKKAQ 158
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E + ++F+Q+G V ++ D TG+ RGF FVT+ ++ AV+ L +
Sbjct: 84 KIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-S 142
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
G I K I+ K+ R N
Sbjct: 143 GPLEICGKPIEVKKAQPRGN 162
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G G ++ K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K
Sbjct: 105 GTGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPK 164
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V+ ++ +HY+ K IDPKR R K KIFVGG++ E TEQD + +F Q+G +
Sbjct: 165 TVNTVMVK-EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVV 223
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 224 DATLMIDKDTGRPRGFGFVTFDSEAAVEATLSRPLEIL-GKSIEVKKAQ 271
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 104/166 (62%), Gaps = 2/166 (1%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
++++ K+F+GGL+ T E+ + +YF Q+G++ ++I D TG+SRGF F+T+T +VD
Sbjct: 149 KSEQGKMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVD 208
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
++L H + K IDPKR R K KIFVGG+ E+TE+D DYFSQ+G+I + Q
Sbjct: 209 EVLKK-QHVLDGKLIDPKRAIPREEQDKTGKIFVGGIAAEVTEEDFTDYFSQFGTIIDAQ 267
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F+++D + D+V N + G+ +++KR +
Sbjct: 268 LMIDKDTGRSRGFGFVTYDSPDAVDRVCANKYVPLKGRSMEIKRAE 313
>gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus]
Length = 304
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++G+V ++K DP TG+SRGF FV +
Sbjct: 87 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKES 146
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 147 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 205
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 206 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 240
>gi|350015551|dbj|GAA42894.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Clonorchis
sinensis]
Length = 292
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 102/179 (56%), Gaps = 7/179 (3%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+ ++KLFVGGL+ T E+ + Y+SQ+GE+ + + DP + +SRGF FVT+ +VD
Sbjct: 10 DQDKKLFVGGLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEAASVDK 69
Query: 74 LLAAGDHYIGNKKIDPKRVTKR------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
A H + K++D KR R V+ KIFVGGL ++T D+ +YF QYG++
Sbjct: 70 AQANRPHKLDGKEVDSKRAMPREETSPEVHAAVKKIFVGGLKKDVTNDDLAEYFGQYGTV 129
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
T+ Q K N +GF F++FDD + D+V+ I G + DV++ + E M V
Sbjct: 130 TDAQIVMAKDTNTSRGFAFVTFDDTDSVDKVILARPHTINGHKADVRKA-LSREEMNKV 187
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 114/222 (51%), Gaps = 15/222 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 GDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSV 186
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRA 196
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
G A + G P V Y Y G+A + YGY
Sbjct: 197 RGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 235
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 166 IHFHEINNKMVECKKAQPK 184
>gi|127139464|ref|NP_001076009.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Rattus
norvegicus]
gi|149046817|gb|EDL99591.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Rattus
norvegicus]
Length = 304
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + +E K+F+GGL +T +K++ DYFS++G+V ++K DP TG+SRGF FV +
Sbjct: 87 AATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKES 146
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 147 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 205
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ + P D N ++GFCFI+F ++ ++++
Sbjct: 206 VESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 240
>gi|294658754|ref|XP_002770838.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
gi|202953359|emb|CAR66359.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
Length = 411
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ +T E+ + +YF++YGEV +I D TG+SRGF F+T+ K+VD++
Sbjct: 84 DHGKMFIGGLNWDTTEQGLVEYFTKYGEVIDHTIMRDNNTGKSRGFGFLTFKDPKSVDEV 143
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ DH + K IDPKR R K KIFVGG+ + E+D D+FSQ+GSI + Q
Sbjct: 144 IKT-DHILDGKLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKDFNDFFSQFGSIIDAQLM 202
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF FI++D + D+V N + GK ++VKR +
Sbjct: 203 IDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAE 246
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ EK+ ND+FSQ+G + + D TG+SRGF F+TY + AVD +
Sbjct: 171 KIFVGGIDPMVNEKDFNDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVN 230
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 231 KYLTLKGKSMEVKRAEPR 248
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 114/222 (51%), Gaps = 15/222 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 GDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSV 186
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRA 196
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
G A + G P V Y Y G+A + YGY
Sbjct: 197 RGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 235
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 166 IHFHEINNKMVECKKAQPK 184
>gi|242347894|gb|ACS92717.1| musashi-like protein 2L [Ambystoma mexicanum]
Length = 406
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 106/195 (54%), Gaps = 12/195 (6%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
++G+ ++D K+F+GGL T + DYF ++GE+ + DP T +SRGF FVT
Sbjct: 9 SSGSPSDAQHDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFVT 68
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRD 119
+ +VD +LA H + +K IDPK +R P KIFVGGL+ +DV+
Sbjct: 69 FADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQ 128
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDV 173
YF Q+G + + FDK+ N +GF F++F+ ++V ++V + N K V C K+
Sbjct: 129 YFDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCEIHFHEINNKMVEC-KKAQP 187
Query: 174 KRVKFNPETMGSVSG 188
K V F P T G G
Sbjct: 188 KEVMFPPGTRGRARG 202
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 114/222 (51%), Gaps = 15/222 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 GDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSV 186
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRA 196
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
G A + G P V Y Y G+A + YGY
Sbjct: 197 RGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 235
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 166 IHFHEINNKMVECKKAQPK 184
>gi|134057544|emb|CAK48898.1| unnamed protein product [Aspergillus niger]
Length = 471
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E E D +++F+Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P + ICGK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVEAALSGPLE-ICGKPIEVKKAQ 158
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E + ++F+Q+G V ++ D TG+ RGF FVT+ ++ AV+ L +
Sbjct: 84 KIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL-S 142
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
G I K I+ K+ R N
Sbjct: 143 GPLEICGKPIEVKKAQPRGN 162
>gi|301777376|ref|XP_002924104.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ailuropoda melanoleuca]
Length = 261
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 79 DHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPK 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 120 SNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 156
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF ++GE+E+I + DP + + RGF F+T+ ++ V +L
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKKVLE 142
Query: 77 AGDHYIGNKKIDPK 90
H I K + K
Sbjct: 143 KKFHTISGSKCEIK 156
>gi|351704017|gb|EHB06936.1| Heterogeneous nuclear ribonucleoprotein A/B, partial
[Heterocephalus glaber]
Length = 261
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 101/158 (63%), Gaps = 2/158 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 60
Query: 78 GDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF +G I + P D
Sbjct: 61 KEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDP 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F +++ +VL+ I G + ++K
Sbjct: 120 KLNKRRGFVFITFKEEDPVKKVLEKKFHTISGSKCEIK 157
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF +GE+E+I + DP + RGF F+T+ + V +L
Sbjct: 84 KKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEDPVKKVLE 143
Query: 77 AGDHYIGNKKIDPK 90
H I K + K
Sbjct: 144 KKFHTISGSKCEIK 157
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + DYF +YG++ + DP T +SRGF FVT++ +VD
Sbjct: 36 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 95
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + KK+DPK +R +P KIFVGGL+ T +DV+ YF Q+G I
Sbjct: 96 VLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 155
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK N +GF F++F ++V D+V + I K V+ K+ + + +
Sbjct: 156 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLA 215
Query: 189 AVRGAG 194
R AG
Sbjct: 216 KTRAAG 221
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 114/222 (51%), Gaps = 15/222 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 2 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 61
Query: 78 GDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 62 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 121
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSV 186
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 122 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRA 180
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
G A + G P V Y Y G+A + YGY
Sbjct: 181 RGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 219
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 90 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 149
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 150 IHFHEINNKMVECKKAQPK 168
>gi|171846711|gb|AAI61598.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 280
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL +T +K++ DYFS++GEV +IK DP TG+SRGF F+ + +VD +L
Sbjct: 20 KMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEQ 79
Query: 78 GDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + + IDPK+ + + +P+K KIFVGGL E E +R+YF +G I + P D
Sbjct: 80 KEHRLDGRLIDPKKAMAMKKDPIK-KIFVGGLNPEAGEDKIREYFETFGEIEAIELPMDP 138
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F ++ ++L+ + G + ++K
Sbjct: 139 KTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKFEIK 176
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ GE +I +YF +GE+E+I + DP T + RGF F+T+ ++ V +L
Sbjct: 103 KKIFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILE 162
Query: 77 AGDHYIGNKKIDPK 90
H + K + K
Sbjct: 163 KKFHNVSGSKFEIK 176
>gi|448098292|ref|XP_004198889.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359380311|emb|CCE82552.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ +T E+ + DYF+Q+GEV +I D TG+SRGF F+T+ K+V+++
Sbjct: 159 DHGKMFIGGLNWDTSEQGLVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEV 218
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ DH + K IDPKR R K KIFVGG+ + E++ D+FSQ+GSI + Q
Sbjct: 219 IKR-DHILDGKLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLM 277
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF FI++D + D+V N + GK ++VKR +
Sbjct: 278 IDKDTGRSRGFGFITYDSPDAVDRVTVNKYLTLKGKSMEVKRAE 321
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ EKE +D+FSQ+G + + D TG+SRGF F+TY + AVD +
Sbjct: 246 KIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVN 305
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 306 KYLTLKGKSMEVKRAEPR 323
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + DYF +YG++ + DP T +SRGF FVT++ +VD
Sbjct: 40 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 99
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + KK+DPK +R +P KIFVGGL+ T +DV+ YF Q+G I
Sbjct: 100 VLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 159
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK N +GF F++F ++V D+V + I K V+ K+ + + +
Sbjct: 160 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLA 219
Query: 189 AVRGAG 194
R AG
Sbjct: 220 KTRAAG 225
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + DYF +YG++ + DP T +SRGF FVT++ +VD
Sbjct: 40 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 99
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + KK+DPK +R +P KIFVGGL+ T +DV+ YF Q+G I
Sbjct: 100 VLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 159
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK N +GF F++F ++V D+V + I K V+ K+ + + +
Sbjct: 160 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLA 219
Query: 189 AVRGAG 194
R AG
Sbjct: 220 KTRAAG 225
>gi|223646910|gb|ACN10213.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
gi|223672773|gb|ACN12568.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 99/165 (60%), Gaps = 2/165 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A G +D K+FVGGL +T +K++ DYFS++GEV +IK D TG+SRGF F+ +
Sbjct: 73 NASKGEDDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFKE 132
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+VD +L +H + ++IDPK+ + + P K KIFVGGL E TE+ +R+YF +G
Sbjct: 133 AGSVDKVLEQKEHRLDGRQIDPKKAMAMKKEPAK-KIFVGGLNPEATEETIREYFGTFGE 191
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEV 171
I + P D ++GF FI+F ++ + L+ +CG +V
Sbjct: 192 IESIELPVDPKFKKRRGFIFITFKEEATVKKCLEKKFHNVCGTKV 236
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + DYF +YG++ + DP T +SRGF FVT++ +VD
Sbjct: 26 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + KK+DPK +R +P KIFVGGL+ T +DV+ YF Q+G I
Sbjct: 86 VLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 145
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK N +GF F++F ++V D+V + I K V+ K+ + + +
Sbjct: 146 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLA 205
Query: 189 AVRGAG 194
R AG
Sbjct: 206 KTRAAG 211
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 114/222 (51%), Gaps = 15/222 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 1 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 60
Query: 78 GDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 61 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 120
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSV 186
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 121 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRA 179
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
G A + G P V Y Y G+A + YGY
Sbjct: 180 RGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 218
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 89 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 148
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 149 IHFHEINNKMVECKKAQPK 167
>gi|326928651|ref|XP_003210489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Meleagris gallopavo]
gi|449474690|ref|XP_004175898.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
gi|449474694|ref|XP_002196057.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Taeniopygia
guttata]
Length = 262
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 101/157 (64%), Gaps = 2/157 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEPGSVEKVLEQK 60
Query: 79 DHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 61 EHRLDGRLIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPK 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F +++ +VL+ + G + ++K
Sbjct: 120 TNKRRGFVFITFKEEDPVKKVLEKKFHNVSGSKCEIK 156
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF ++GE+E+I + DP T + RGF F+T+ + V +L
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKVLE 142
Query: 77 AGDHYIGNKKIDPK 90
H + K + K
Sbjct: 143 KKFHNVSGSKCEIK 156
>gi|221220742|gb|ACM09032.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 336
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 99/165 (60%), Gaps = 2/165 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A G +D K+FVGGL +T +K++ DYFS++GEV +IK D TG+SRGF F+ +
Sbjct: 73 NASKGEDDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDSNTGRSRGFGFILFKE 132
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+VD +L +H + ++IDPK+ + + P K KIFVGGL E TE+ +R+YF +G
Sbjct: 133 AGSVDKVLEQKEHRLDGRQIDPKKAMAMKKEPAK-KIFVGGLNPEATEETIREYFGTFGE 191
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEV 171
I + P D ++GF FI+F ++ + L+ +CG +V
Sbjct: 192 IESIELPVDLKFKKRRGFIFITFKEEATVKKCLEKKFHNVCGTKV 236
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + DYF +YG++ + DP T +SRGF FVT++ +VD
Sbjct: 27 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 86
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + KK+DPK +R +P KIFVGGL+ T +DV+ YF Q+G I
Sbjct: 87 VLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 146
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK N +GF F++F ++V D+V + I K V+ K+ + + +
Sbjct: 147 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLA 206
Query: 189 AVRGAG 194
R AG
Sbjct: 207 KTRAAG 212
>gi|451850144|gb|EMD63446.1| hypothetical protein COCSADRAFT_160854 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 97/161 (60%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T E + YFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 108 KMFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCV-NIVMV 166
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+HY+ K IDPKR R + KIFVGG++ E TE+D ++F Q+G + + DK
Sbjct: 167 KEHYLDGKIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDK 226
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD D L+ P Q++ GK+++VKR +
Sbjct: 227 ETGRPRGFGFVTFDGDAAVDATLRGPLQIL-GKQIEVKRAQ 266
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+F+GGL+ T E + YF+Q+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 87 RKMFIGGLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCV-NIVM 145
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+HY+ K IDPKR R + KIFVGG++ E TE+D +F Q+G + + D
Sbjct: 146 VKEHYLDGKIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTAFFKQFGRVVDATLMMD 205
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
K +GF F++FD D LK P Q++ GK ++VKR +
Sbjct: 206 KETGRPRGFGFVTFDGDAAVDATLKGPLQIL-GKPIEVKRAQ 246
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 5/186 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + DYF +YG++ + DP T +SRGF FVT++ +VD
Sbjct: 26 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDK 85
Query: 74 LLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + KK+DPK +R +P KIFVGGL+ T +DV+ YF Q+G I
Sbjct: 86 VLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIE 145
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK N +GF F++F ++V D+V + I K V+ K+ + + +
Sbjct: 146 DAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEVMLPANLA 205
Query: 189 AVRGAG 194
R AG
Sbjct: 206 KTRAAG 211
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 15/215 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL R+T +FS+YGE+ I D +TGQ RGF FVTY VD ++
Sbjct: 47 KIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVDKVIED 106
Query: 78 GDHYIGNKKIDPKRVTKRVN----PLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + + ++ KR R N P KIFVGG+ T ITE + +DYFS++G + E Q
Sbjct: 107 -KHILDGRTVEIKRTIPRGNTSKGPKTKKIFVGGIPTTITEDEFKDYFSKFGKVAEHQIM 165
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQV-ICGKEVDVKRVKFNPETMGSVSGAVRG 192
D+S +GF FI+FD + V ++++ K + + GK+V++K+ + P+ S +G V G
Sbjct: 166 QDRSTGRSRGFGFITFDSEQVVEEIISQGKMIELGGKQVEIKKAE--PKKPSSDAGPVHG 223
Query: 193 AGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYG 227
R PG V + +Y+G+ A YG
Sbjct: 224 IDNRP-------PYIPGGVGGFRDSYSGFEGAGYG 251
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R N + GP +K+FVGG+ E E DYFS++G+V I D TG+SRGF F+
Sbjct: 123 RGNTSKGP---KTKKIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFI 179
Query: 64 TYTTQKAVDDLLAAGDHY-IGNKKIDPKR 91
T+ +++ V+++++ G +G K+++ K+
Sbjct: 180 TFDSEQVVEEIISQGKMIELGGKQVEIKK 208
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 86 KIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFC 145
K D T R KIF+GGL+ T +FS+YG +T+ D+ +GF
Sbjct: 31 KEDKNNDTSREASSPGKIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFG 90
Query: 146 FISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
F+++ D +V D+V+++ K ++ G+ V++KR
Sbjct: 91 FVTYADASVVDKVIED-KHILDGRTVEIKRT 120
>gi|410976792|ref|XP_003994797.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Felis catus]
Length = 380
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 128/249 (51%), Gaps = 24/249 (9%)
Query: 21 VGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDH 80
+GGL T ++ + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA H
Sbjct: 42 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRH 101
Query: 81 YIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+ +K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G + + FD
Sbjct: 102 ELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFD 161
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGA 195
K+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG
Sbjct: 162 KTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARGRSR 219
Query: 196 RVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAYPAP 255
+ A+ G ++ YP G+ A +Y + + Y A GY Y P
Sbjct: 220 VMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS-----YTGLAPGYTYQFP 262
Query: 256 AVQTMDTPL 264
+ TPL
Sbjct: 263 EFRVERTPL 271
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 127 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 186
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 187 IHFHEINNKMVECKK 201
>gi|332265255|ref|XP_003281643.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Nomascus
leucogenys]
Length = 261
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 79 DHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPK 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 120 LNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 156
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF ++GE+E+I + DP + RGF F+T+ ++ V +L
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 142
Query: 77 AGDHYIGNKKIDPK 90
H I K + K
Sbjct: 143 KKFHTISGSKCEIK 156
>gi|313235107|emb|CBY24978.1| unnamed protein product [Oikopleura dioica]
Length = 258
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 95/161 (59%), Gaps = 4/161 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
+E K+FVGGL + T + YF YG+V+ + +K DP TG SRGF FV +T ++++ +
Sbjct: 20 NENKMFVGGLSKKTTVEAFRTYFEAYGDVKDVVVKTDPSTGTSRGFGFVMFTAEESIGKV 79
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
LAAG H + K+IDPK+ +R K+FVGG+ ++ T + +++YFSQ+G + +P
Sbjct: 80 LAAGPHNLDGKRIDPKKAERRDG----KMFVGGVKSDTTVETIKEYFSQFGEVESVDRPV 135
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+K N K FCF+ F V + +K I GK + K
Sbjct: 136 NKQTNENKPFCFVIFRKDGVNSKCIKQRYHEIDGKRCECKE 176
>gi|351695029|gb|EHA97947.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Heterocephalus glaber]
Length = 340
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 59 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 118
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 119 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 177
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 178 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 226
>gi|327273004|ref|XP_003221273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Anolis
carolinensis]
Length = 334
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 94/145 (64%), Gaps = 3/145 (2%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL +T +K++ DYF+++GEV ++K DP TG+SRGF F+ + ++VD ++
Sbjct: 78 KMFIGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDKVMDQ 137
Query: 78 GDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G + + P D
Sbjct: 138 KEHKLNGKVIDPKRAKAMKTKEPIK-KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 196
Query: 136 KSKNMKKGFCFISFDDQNVADQVLK 160
N ++GFCFI+F D+ ++++
Sbjct: 197 NKTNKRRGFCFITFKDEEPVKKIME 221
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL +T E++I +YF +GEVESI + D T + RGF F+T+ ++ V ++
Sbjct: 162 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKDEEPVKKIME 221
Query: 77 AGDHYIGNKKIDPK 90
H +G K + K
Sbjct: 222 KKYHNVGLSKCEIK 235
>gi|405960558|gb|EKC26474.1| RNA-binding protein Musashi-like protein Rbp6 [Crassostrea gigas]
Length = 281
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 112/204 (54%), Gaps = 10/204 (4%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + D+F ++GE++ + DP T +SRGF FVTY +VD
Sbjct: 22 NDPGKMFIGGLSWQTTVESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKDPASVDT 81
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKC-----KIFVGGLTTEITEQDVRDYFSQYGSIT 128
L G H + NK +DPK R K KIFVGGL+ T +DV++YFSQYG I
Sbjct: 82 CLENGPHILDNKTVDPKVAFPRKAQPKMVTRTKKIFVGGLSAATTVEDVKNYFSQYGKIE 141
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSG 188
+ FDK+ N +GF F++F++++V D+V + I K V+ K+ + P+ + +
Sbjct: 142 DAMLMFDKTTNRHRGFGFVTFENEDVVDKVCEIHFHEINKKMVECKKAQ--PKEVMLPTT 199
Query: 189 AVRGAGARVSSAGAAYAAAPGRVV 212
RG G + AY G +V
Sbjct: 200 LARGRG---TLTRGAYVTEDGEIV 220
>gi|108744009|gb|ABG02277.1| heterogeneous nuclear ribonucleoprotein A/B [Haplochromis burtoni]
Length = 316
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A G D K+FVGGL +T +K++ DYFS++GEV +IK D TG+SRGF FV +
Sbjct: 48 ASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDS 107
Query: 69 KAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
+VD +L +H + + IDPKR + + +P+K KIFVGGL E TE+ +R+YF +G I
Sbjct: 108 ASVDKVLEQKEHRLDGRNIDPKRAMAMKKDPVK-KIFVGGLNPEATEETIREYFGAFGEI 166
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ P D ++GF FI++ ++ + L+ I G ++K
Sbjct: 167 ETIELPIDPKSKKRRGFIFITYKEETSVKKCLEKKYHNIQGGRCELK 213
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/227 (35%), Positives = 115/227 (50%), Gaps = 15/227 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +LA
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 78 GDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSV 186
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRA 196
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSY 233
G A + G P V Y Y G+A + Y Y Y
Sbjct: 197 RGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YSYQFPDY 240
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 166 IHFHEINNKMVECKK 180
>gi|25121993|ref|NP_733839.1| RNA-binding protein Musashi homolog 2 isoform b [Homo sapiens]
gi|332848594|ref|XP_003315679.1| PREDICTED: uncharacterized protein LOC748578 [Pan troglodytes]
gi|426347417|ref|XP_004041349.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Gorilla gorilla
gorilla]
gi|21752839|dbj|BAC04244.1| unnamed protein product [Homo sapiens]
gi|119614916|gb|EAW94510.1| musashi homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 251
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 115/227 (50%), Gaps = 15/227 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 GDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + +K IDPK R ++ KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSV 186
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRA 196
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSY 233
G A + G P V Y Y G+A + YGY Y
Sbjct: 197 RGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGYQFPDY 240
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 166 IHFHEINNKMVECKK 180
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 98/161 (60%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 27 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 86
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+HY+ K IDPKR R K KIFVGG++ E TEQD + +F Q+G + + DK
Sbjct: 87 -EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDK 145
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 146 DTGRPRGFGFVTFDSEAAVEATLSRPLEIL-GKSIEVKKAQ 185
>gi|344301066|gb|EGW31378.1| hypothetical protein SPAPADRAFT_154438 [Spathaspora passalidarum
NRRL Y-27907]
Length = 507
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+FVGGL+ +T E+ + DYFS+YG V +I D TG+SRGF F+T+ K+VD++
Sbjct: 170 DSGKMFVGGLNWDTTEEGLRDYFSKYGNVLDYTIMRDSATGRSRGFGFLTFEDPKSVDEV 229
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ DH + K IDPKR R + KIFVGG+ +TE++ D+F+QYGSI + Q
Sbjct: 230 IKV-DHILDGKLIDPKRAIAREEQDRVGKIFVGGIDPLVTEKEFYDFFAQYGSIIDAQLM 288
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF FI++D + D+V N + G+ ++VKR +
Sbjct: 289 VDKDTGRSRGFGFITYDSPDAVDRVTVNKYLSLKGRAMEVKRAE 332
>gi|71999554|ref|NP_001023574.1| Protein SQD-1, isoform b [Caenorhabditis elegans]
gi|351059313|emb|CCD74156.1| Protein SQD-1, isoform b [Caenorhabditis elegans]
Length = 308
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 127/241 (52%), Gaps = 9/241 (3%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
+ NG + G N+++K+FVGG+ ++++ +F+QYGEV +K D G+SRGFAFV
Sbjct: 17 KENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFV 75
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+TT + LAA + I K ++ K R N K+FVGGL ++ +EQD+R +F Q
Sbjct: 76 EFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENK---KVFVGGLPSDYSEQDLRSHFEQ 132
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV----KFN 179
+G + + + PFDK ++ F FI F+++ AD+ KQ +E DVK+ K
Sbjct: 133 FGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRF 192
Query: 180 PETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATA 239
P G + G G R + + + A G++ A P G A D+ Y G Y A
Sbjct: 193 PGAQGRMPGGRGMYGGRGGNNNSGWYAGWGQIGAMPYGATGAAWGDW-YGNGYYGQQGAA 251
Query: 240 Y 240
+
Sbjct: 252 H 252
>gi|432884676|ref|XP_004074535.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Oryzias
latipes]
Length = 314
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 3/168 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+FVGGL +T +K++ DYF+++GEV ++K DP TG+SRGF FV +
Sbjct: 48 ASKNEEDEGKMFVGGLSWDTTKKDLKDYFAKFGEVVDCTLKLDPMTGRSRGFGFVLFKDA 107
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++V+ + + +H + K IDPK+ K P+K K+FVGGL+ + E+ VR+YF +G
Sbjct: 108 ESVEKVASQKEHKLNGKVIDPKKAKAMKSKEPVK-KVFVGGLSPDTPEEKVREYFGAFGE 166
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ + P + N ++GFCFI+F ++ +V++ I + +VK
Sbjct: 167 VESIELPMENKTNKRRGFCFITFKEEEAVKKVMEKKYHNIGLSKCEVK 214
>gi|344246933|gb|EGW03037.1| Heterogeneous nuclear ribonucleoprotein A/B [Cricetulus griseus]
Length = 211
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 101/157 (64%), Gaps = 2/157 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQK 60
Query: 79 DHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF Q+G I + P D
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPK 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI++ +++ +VL+ + G + ++K
Sbjct: 120 LNKRRGFVFITYKEEDPVKKVLEKKFHTVSGSKCEIK 156
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF Q+GE+E+I + DP + RGF F+TY + V +L
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITYKEEDPVKKVLE 142
Query: 77 AGDHYIGNKKIDPK 90
H + K + K
Sbjct: 143 KKFHTVSGSKCEIK 156
>gi|337451|gb|AAA36575.1| hnRNP type A/B protein [Homo sapiens]
gi|228098|prf||1717217A hnRNP protein A/B
Length = 284
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 104/173 (60%), Gaps = 3/173 (1%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+
Sbjct: 55 RDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFI 114
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEI-TEQDVRDYF 121
+ +V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF
Sbjct: 115 LFKDAASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPESPTEEKIREYF 173
Query: 122 SQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
++G I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 174 GEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 226
>gi|76096336|ref|NP_001028868.1| heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
gi|123783017|sp|Q3SWU3.1|HNRDL_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|74356265|gb|AAI04684.1| Heterogeneous nuclear ribonucleoprotein D-like [Rattus norvegicus]
Length = 322
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV + +VD +L
Sbjct: 52 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 111
Query: 78 GDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G I + P D
Sbjct: 112 KEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMD 170
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 171 TKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 209
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G+ +K+FVGGL +T E++I +YF +GE+E+I + D T + RGF F+TYT ++ V
Sbjct: 131 GKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPV 190
Query: 72 DDLLAAGDHYIGNKKIDPK 90
LL + H IG+ K + K
Sbjct: 191 KKLLESRYHQIGSGKCEIK 209
>gi|355694953|gb|AER99843.1| heteroproteinous nuclear ribonucleoprotein D-like protein [Mustela
putorius furo]
Length = 294
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 84 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 143
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 144 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 202
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 203 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 251
>gi|50548677|ref|XP_501808.1| YALI0C13860p [Yarrowia lipolytica]
gi|49647675|emb|CAG82118.1| YALI0C13860p [Yarrowia lipolytica CLIB122]
Length = 367
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 109/177 (61%), Gaps = 4/177 (2%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + +YF+Q+GEV ++ D ++G+SRGF F+T+ K V+ ++A
Sbjct: 1 MFIGGLNWETTDESLTNYFAQFGEVLECTVMRDHFSGKSRGFGFLTFRDPKCVNAVMAK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG+ +++TE+D + +F QYG++ + Q DK
Sbjct: 60 EHYLDGKIIDPKRAIPREEQDKTSKIFVGGVGSDVTEEDYKQFFEQYGTVIDAQLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMG--SVSGAVRG 192
+GF F++FD + + +L P ++ K ++VKR + + G +V+ AV G
Sbjct: 120 SGRPRGFGFVTFDSEQAMNTILAQPLLILKDKPIEVKRAENRSKGAGASAVANAVAG 176
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E++ +F QYG V + D +G+ RGF FVT+ +++A++ +LA
Sbjct: 84 KIFVGGVGSDVTEEDYKQFFEQYGTVIDAQLMIDKDSGRPRGFGFVTFDSEQAMNTILAQ 143
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ +K I+ KR R
Sbjct: 144 PLLILKDKPIEVKRAENR 161
>gi|1814274|gb|AAC50956.1| ABBP-1 [Homo sapiens]
Length = 331
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 59 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 118
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEI-TEQDVRDYFSQYG 125
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 119 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPESPTEEKIREYFGEFG 177
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 178 EIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 226
>gi|71999552|ref|NP_001023573.1| Protein SQD-1, isoform a [Caenorhabditis elegans]
gi|351059312|emb|CCD74155.1| Protein SQD-1, isoform a [Caenorhabditis elegans]
Length = 305
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 127/241 (52%), Gaps = 9/241 (3%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
+ NG + G N+++K+FVGG+ ++++ +F+QYGEV +K D G+SRGFAFV
Sbjct: 17 KENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFV 75
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+TT + LAA + I K ++ K R N K+FVGGL ++ +EQD+R +F Q
Sbjct: 76 EFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENK---KVFVGGLPSDYSEQDLRSHFEQ 132
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV----KFN 179
+G + + + PFDK ++ F FI F+++ AD+ KQ +E DVK+ K
Sbjct: 133 FGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGKRF 192
Query: 180 PETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATA 239
P G + G G R + + + A G++ A P G A D+ Y G Y A
Sbjct: 193 PGAQGRMPGGRGMYGGRGGNNNSGWYAGWGQIGAMPYGATGAAWGDW-YGNGYYGQQGAA 251
Query: 240 Y 240
+
Sbjct: 252 H 252
>gi|297676866|ref|XP_002816343.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pongo
abelii]
Length = 259
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 99/156 (63%), Gaps = 2/156 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 79 DHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPK 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDV 173
N ++GF FI+F ++ +VL+ I G ++ V
Sbjct: 120 LNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKIKV 155
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF ++GE+E+I + DP + RGF F+T+ ++ V +L
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 142
Query: 77 AGDHYIGNKKI---DPKRV 92
H I KI PK V
Sbjct: 143 KKFHTISGSKIKVAQPKEV 161
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 99/163 (60%), Gaps = 5/163 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T + + +F ++GE++ + DP T +SRGF F+T+ KAVD +L +
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 60
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
G + KKIDPK + P K KIF+GGL+T +E+D++ YFSQ+G ITE
Sbjct: 61 GAQELDGKKIDPKLAVPKRAPAKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKITETML 120
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
FDK+ +GF F++F+ +N AD+ +I K+V+VK+
Sbjct: 121 MFDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKK 163
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+F+GGL NT E+++ YFSQ+G++ + D T + RGF FVT+ ++ + D
Sbjct: 89 KKIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQRHRGFGFVTFESENSADKACD 148
Query: 77 AGDHYIGNKKIDPKR 91
H I NKK++ K+
Sbjct: 149 TQYHLINNKKVEVKK 163
>gi|444723245|gb|ELW63904.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 326
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 20 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 79
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 80 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 138
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 187
>gi|440898654|gb|ELR50102.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Bos grunniens mutus]
Length = 356
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 75 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 134
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 135 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 193
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 194 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 242
>gi|397467431|ref|XP_003805422.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Pan
paniscus]
Length = 261
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 100/157 (63%), Gaps = 2/157 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 79 DHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G I + P D
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPK 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 120 LNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 156
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF ++GE+E+I + DP + RGF F+T+ ++ V +L
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 142
Query: 77 AGDHYIGNKKIDPK 90
H + K + K
Sbjct: 143 KKFHTVSGSKCEIK 156
>gi|345322713|ref|XP_001506312.2| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Ornithorhynchus anatinus]
Length = 251
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 115/227 (50%), Gaps = 15/227 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +LA
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 78 GDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + +K IDPK R ++ KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSV 186
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRA 196
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSY 233
G A + G P V Y Y G+A + Y Y Y
Sbjct: 197 RGLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YSYQFPDY 240
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 166 IHFHEINNKMVECKK 180
>gi|160333913|ref|NP_001103930.1| heterogeneous nuclear ribonucleoprotein D0 [Danio rerio]
gi|141796298|gb|AAI39675.1| Hnrnpd protein [Danio rerio]
Length = 314
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 97/154 (62%), Gaps = 3/154 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+FVGGL +T +K++ DYF+++GEV ++K DP TG+SRGF FV +
Sbjct: 46 ASKNEEDEGKMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPLTGRSRGFGFVLFKEA 105
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++V+ ++ +H + K IDPK+ K P+K KIFVGGL+ + E+ +R+YF YG
Sbjct: 106 ESVEKVITQKEHKLNGKVIDPKKAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFDAYGE 164
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
+ + P + N ++GFCFI+F ++ ++++
Sbjct: 165 VESIELPMENKTNKRRGFCFITFKEEEPVKKIME 198
>gi|432901707|ref|XP_004076907.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 279
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 92/160 (57%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A G +D K+FVGGL +T +K++ DYFS++GEV +IK D TG+SRGF FV +
Sbjct: 48 ASKGEDDAGKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDS 107
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+VD +L +H + ++IDPKR KIFVGGL E TE+ +R+YF +G I
Sbjct: 108 SSVDKVLEQKEHRLDGRQIDPKRAMAMKKEAVRKIFVGGLNPEATEEAIREYFGAFGEIE 167
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICG 168
+ P D ++GF FI++ D+ + L+ I G
Sbjct: 168 TIELPIDPKSKKRRGFIFITYKDEASVKKCLEKKYHTIEG 207
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E TEQD + +F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD ++ L P +++ GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDGDAAVEKALSRPLEIL-GKPIEVKKAQ 158
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E++ +F Q+G V ++ D TG+ RGF FVT+ AV+ L+
Sbjct: 84 KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKALSR 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+G K I+ K+ R N
Sbjct: 144 PLEILG-KPIEVKKAQPRGN 162
>gi|344243477|gb|EGV99580.1| RNA-binding protein Musashi-like 2 [Cricetulus griseus]
Length = 325
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 113/221 (51%), Gaps = 15/221 (6%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 79 DHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVS 187
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRAR 179
Query: 188 GAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
G A + G P V Y Y G+A + YGY
Sbjct: 180 GLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 217
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 148 IHFHEINNKMVECKKAQPK 166
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R + KIFVGG++ E TEQD + +F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 120 SGRPRGFGFVTFDSEAAVEATLSGPLEIL-GKPIEVKKAQ 158
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E++ +F Q+G V ++ D +G+ RGF FVT+ ++ AV+ L+
Sbjct: 84 KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSG 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+G K I+ K+ R N
Sbjct: 144 PLEILG-KPIEVKKAQPRGN 162
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 113/221 (51%), Gaps = 15/221 (6%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 79 DHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVS 187
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRAR 179
Query: 188 GAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
G A + G P V Y Y G+A + YGY
Sbjct: 180 GLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 217
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 148 IHFHEINNKMVECKKAQPK 166
>gi|90076284|dbj|BAE87822.1| unnamed protein product [Macaca fascicularis]
Length = 231
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 20 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 79
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 80 AASVDKVLELKEHKLDGKLIDPKRAKALKGKGPPK-KVFVGGLSPDTSEEQIKEYFGAFG 138
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
I + P D N ++GFCFI++ D+ ++L++
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLES 174
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+F+GGL+ + +++D+ +Y S++G + + D +GF F+ F D D+VL+
Sbjct: 30 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 89
Query: 162 PKQVICGKEVDVKRVK 177
+ + GK +D KR K
Sbjct: 90 KEHKLDGKLIDPKRAK 105
>gi|403290028|ref|XP_003936135.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Saimiri
boliviensis boliviensis]
Length = 260
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 79 DHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF +G I + P D
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPK 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 120 LNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 156
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E++I +YF +GE+E+I + DP + RGF F+T+ ++ V +L
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 142
Query: 77 AGDHYIGNKKIDPK 90
H I K + K
Sbjct: 143 KKFHTISGSKCEIK 156
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLFVGGL T ++ + YF Q+GE+ + + DP T +SRGF F+TY VDD
Sbjct: 8 RKLFVGGLDYKTTDENLKKYFEQWGEIMDVVVMKDPQTKRSRGFGFITYAAAHMVDDAQG 67
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR + + K K+FVG L ITE+D+++YFS YG++T
Sbjct: 68 ARPHKIDGRTVEPKRAVPKTDIGKPEAGATVKKLFVGLLNDSITEEDLKEYFSPYGNVTS 127
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVS 187
K K+GF F+ FDD + D++ +I GK++DVK+ + E M V+
Sbjct: 128 AALVVHKETGKKRGFGFVEFDDYDPVDKICLKGSHIIKGKKIDVKKA-LSKEEMARVN 184
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 107/188 (56%), Gaps = 3/188 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D+ K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V ++
Sbjct: 114 DDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTV-NI 172
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ +HY+ K IDPKR R K KIFVGG++ + T+Q+ RD+F+Q+G + +
Sbjct: 173 VMVKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFRDFFAQFGRVIDATLM 232
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
DK +GF F++F+ + D + P + I GK ++VKR + A RG
Sbjct: 233 MDKDTGRPRGFGFVTFESEAGVDNCISIPLE-IHGKPIEVKRAQPRGNLREEEEAAKRGK 291
Query: 194 GARVSSAG 201
+V G
Sbjct: 292 FKKVDDQG 299
>gi|355687288|gb|EHH25872.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Macaca mulatta]
Length = 309
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 28 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 87
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 88 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 146
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 147 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 195
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 127/260 (48%), Gaps = 33/260 (12%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
A+G+ ND K+F+GGL T + + +YFS+YG++ + + DP T +SRGF F+T
Sbjct: 110 ASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFIT 169
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRD 119
+T +VD +LA G H + KKIDPK +R +P KIFVGGL+ T +DV+
Sbjct: 170 FTDPASVDKVLAQGTHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKS 229
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDV 173
YF Q+G I + FDK N +GF F++F ++V D+V + N K V C K+
Sbjct: 230 YFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVEC-KKAQP 288
Query: 174 KRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSY 233
K V P + A RGA Y + A G+ A +Y
Sbjct: 289 KEVML-PANLAKTRAAGRGA--------------------YDNFMWSLGALPDGFPAAAY 327
Query: 234 DAYATAYPGYDYSAMGYAYP 253
AYA Y + G YP
Sbjct: 328 AAYAAGRGYSGYPSFGLPYP 347
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 99/161 (61%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+HY+ K IDPKR R + KIFVGG++ E TEQD + +F Q+G + + DK
Sbjct: 215 -EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDK 273
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 274 DSGRPRGFGFVTFDSEAAVEATLSGPLEIL-GKPIEVKKAQ 313
>gi|291405742|ref|XP_002719144.1| PREDICTED: musashi 2-like [Oryctolagus cuniculus]
Length = 306
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 113/221 (51%), Gaps = 15/221 (6%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 79 DHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVS 187
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRAR 179
Query: 188 GAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
G A + G P V Y Y G+A + YGY
Sbjct: 180 GLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 217
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 148 IHFHEINNKMVECKKAQPK 166
>gi|88682985|gb|AAI05387.1| HNRPDL protein [Bos taurus]
Length = 336
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 55 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 114
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 115 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 173
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 174 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 222
>gi|71896731|ref|NP_001026314.1| heterogeneous nuclear ribonucleoprotein D0 [Gallus gallus]
gi|326918726|ref|XP_003205639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Meleagris gallopavo]
gi|53135954|emb|CAG32472.1| hypothetical protein RCJMB04_26e18 [Gallus gallus]
Length = 257
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 93/144 (64%), Gaps = 3/144 (2%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV + ++VD ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 79 DHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G + + P D
Sbjct: 61 EHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDN 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLK 160
N ++GFCFI+F ++ ++++
Sbjct: 120 KTNKRRGFCFITFKEEEPVKKIME 143
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL +T E++I +YF +GEVESI + D T + RGF F+T+ ++ V ++
Sbjct: 84 KKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 143
Query: 77 AGDHYIGNKKIDPK 90
H +G K + K
Sbjct: 144 KKYHNVGLSKCEIK 157
>gi|449479907|ref|XP_002196910.2| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 1
[Taeniopygia guttata]
Length = 306
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 111/217 (51%), Gaps = 14/217 (6%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +LA
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQP 60
Query: 79 DHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVS 187
FDK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRAR 179
Query: 188 GAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAA 224
G A + G P V Y Y G+A +
Sbjct: 180 GLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS 214
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 148 IHFHEINNKMVECKKAQPK 166
>gi|351709446|gb|EHB12365.1| Heterogeneous nuclear ribonucleoprotein D0 [Heterocephalus glaber]
Length = 271
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 96/152 (63%), Gaps = 3/152 (1%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
+ +E K+F+GGL +T +K++ D FS++GEV ++K DP TG+SRGF FV ++V
Sbjct: 102 AQREEWKMFMGGLSWDTTKKDLKDCFSKFGEVVDCTLKLDPITGRSRGFGFVLLKESESV 161
Query: 72 DDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
D ++ +H + K IDPKR K P+K KIFVGGL+ + E+++R+YF +G +
Sbjct: 162 DKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEENIREYFGGFGEVES 220
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
+ P D N ++GFCFI+F ++ ++++
Sbjct: 221 IELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 252
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL +T E+ I +YF +GEVESI + D T + RGF F+T+ ++ V ++
Sbjct: 192 KKIFVGGLSPDTPEENIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 251
Query: 77 AGDHYIGNKKIDPK 90
H +G K + K
Sbjct: 252 KKYHNVGLSKCEIK 265
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+F+GGL+ + T++D++D FS++G + + D +GF F+ + D+V+
Sbjct: 108 KMFMGGLSWDTTKKDLKDCFSKFGEVVDCTLKLDPITGRSRGFGFVLLKESESVDKVMDQ 167
Query: 162 PKQVICGKEVDVKRVK 177
+ + GK +D KR K
Sbjct: 168 KEHKLNGKVIDPKRAK 183
>gi|395505200|ref|XP_003756932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Sarcophilus
harrisii]
Length = 278
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 99/157 (63%), Gaps = 2/157 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +VD +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQK 60
Query: 79 DHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + + IDPK+ + + +P+K KIFVGGL E TE +R+YF +G I + P D
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPK 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F +++ ++L+ + G + ++K
Sbjct: 120 TNKRRGFVFITFKEEDPVKKILEKKFHNVGGSKCEIK 156
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ E +I +YF +GE+ESI + DP T + RGF F+T+ + V +L
Sbjct: 83 KKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKILE 142
Query: 77 AGDHYIGNKKIDPK 90
H +G K + K
Sbjct: 143 KKFHNVGGSKCEIK 156
>gi|327272896|ref|XP_003221220.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Anolis
carolinensis]
Length = 311
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 132/250 (52%), Gaps = 6/250 (2%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 31 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 90
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+V+ +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 91 AASVEKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGGFG 149
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGS 185
I + P D N ++GFCFI++ D+ ++L++ I + ++K +
Sbjct: 150 EIENIELPMDTKTNERRGFCFITYSDEEPVKKLLESRYHQIGSGKCEIKVAQPKDVYRQQ 209
Query: 186 VSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYG-YTAGSYDAYATAYPGYD 244
G GA G + G+ ++ Y Y YG Y + D ++Y GYD
Sbjct: 210 QQQQKGGRGASSGGRGGSRGRGRGQGQSWNQGYNNYYDQGYGSYNSPYSDQSYSSYGGYD 269
Query: 245 YSAMGYAYPA 254
YS GY YP+
Sbjct: 270 YS--GYNYPS 277
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E EQD + +F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEVKKAQ 158
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E++ +F Q+G V ++ D TG+ RGF FVT+ ++ AV+ L+
Sbjct: 84 KIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+G K I+ K+ R N
Sbjct: 144 PLEILG-KPIEVKKAQPRGN 162
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 112/221 (50%), Gaps = 15/221 (6%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 79 DHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + +K IDPK +R P KIFVGGL+ +DV+ YF Q+G + +
Sbjct: 61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVS 187
FDK+ N +GF F++F+ ++V ++V + N K V C K+ K V F P T G
Sbjct: 121 FDKTTNRHRGFGFVTFESEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRAR 179
Query: 188 GAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
G A + G P V Y Y G+A + YGY
Sbjct: 180 GLPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 217
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ ++ V+ +
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEKVCE 147
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 148 IHFHEINNKMVECKKAQPK 166
>gi|308448944|ref|XP_003087804.1| hypothetical protein CRE_15246 [Caenorhabditis remanei]
gi|308252629|gb|EFO96581.1| hypothetical protein CRE_15246 [Caenorhabditis remanei]
Length = 275
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 102/173 (58%), Gaps = 4/173 (2%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
+ NG + G N+++K+FVGG+ ++++ +F+QYGEV +K D G+SRGFAFV
Sbjct: 17 KENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFV 75
Query: 64 TYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQ 123
+TT + LAA + I K ++ K R N K+FVGGL ++ +EQ++R +F Q
Sbjct: 76 EFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENK---KVFVGGLPSDYSEQELRSHFEQ 132
Query: 124 YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
+G + + + PFDK ++ F FI F+++ AD+ KQ +E DVK+
Sbjct: 133 FGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKA 185
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + +YFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E TEQD + +F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKTIEVKKAQ 158
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E++ +F Q+G V ++ D TG+ RGF FVT+ ++ AV+ L+
Sbjct: 84 KIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+G K I+ K+ R N
Sbjct: 144 PLEILG-KTIEVKKAQPRGN 162
>gi|268564135|ref|XP_002647098.1| C. briggsae CBR-MSI-1 protein [Caenorhabditis briggsae]
Length = 318
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 10/208 (4%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G D K+F+GGL T + + DYF ++GEV + DP T ++RGF F+T+ +V
Sbjct: 37 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVEPSSV 96
Query: 72 DDLLAAGDHYIGNKKID-----PKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
D +L A DH + KKID PKR ++ K+F+GGL+ T +D++ YF YG
Sbjct: 97 DKVLNARDHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFESYGK 156
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
+ + +DK+ +GF F++FD VAD+V + I GK V+ K+ + P+ V
Sbjct: 157 VEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQ--PK---EV 211
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAY 214
V+ +R ++A Y P ++AY
Sbjct: 212 MLPVQLNKSRAAAARNLYGMPPETLLAY 239
>gi|344249843|gb|EGW05947.1| Heterogeneous nuclear ribonucleoprotein D0 [Cricetulus griseus]
Length = 257
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 93/144 (64%), Gaps = 3/144 (2%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV + ++VD ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 79 DHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G + + P D
Sbjct: 61 EHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLK 160
N ++GFCFI+F ++ ++++
Sbjct: 120 KTNKRRGFCFITFKEEEPVKKIME 143
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL +T E++I +YF +GEVESI + D T + RGF F+T+ ++ V ++
Sbjct: 84 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 143
Query: 77 AGDHYIGNKKIDPK 90
H +G K + K
Sbjct: 144 KKYHNVGLSKCEIK 157
>gi|158523286|sp|Q99729.2|ROAA_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A/B;
Short=hnRNP A/B; AltName: Full=APOBEC1-binding protein
1; Short=ABBP-1
Length = 332
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ +
Sbjct: 60 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKD 119
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEI-TEQDVRDYFSQYG 125
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 120 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPESPTEEKIREYFGEFG 178
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ + G + ++K
Sbjct: 179 EIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIK 227
>gi|2780748|dbj|BAA24361.1| hnRNP JKTBP [Homo sapiens]
gi|4512255|dbj|BAA75240.1| JKTBP1 [Homo sapiens]
Length = 301
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 20 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 79
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 80 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 138
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 187
>gi|81917948|sp|Q9Z130.1|HNRDL_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL; AltName:
Full=JKT41-binding protein
gi|4514631|dbj|BAA75479.1| JKTBP [Mus musculus]
gi|18203892|gb|AAH21374.1| Heterogeneous nuclear ribonucleoprotein D-like [Mus musculus]
gi|74196730|dbj|BAE43104.1| unnamed protein product [Mus musculus]
gi|148688362|gb|EDL20309.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b [Mus
musculus]
Length = 301
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 20 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 79
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 80 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 138
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 187
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 94/169 (55%), Gaps = 11/169 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL R T + + +FS YGE+ + D T SRGF FV Y AV ++L
Sbjct: 9 KIFVGGLTRETTDDMLRQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADAGAVAEVLKN 68
Query: 78 GDHYIGNKKIDPKRVT-KRVNPLKC----------KIFVGGLTTEITEQDVRDYFSQYGS 126
H + NKKIDPK T K + K KIF+GGL TE++V+ YFSQYGS
Sbjct: 69 RPHTLDNKKIDPKPCTPKTIQQQKKNAQIEHTQTHKIFIGGLAQNATEEEVKAYFSQYGS 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+TE +K +N KGF F++F+ ++ DQ + ICGK V+ KR
Sbjct: 129 VTEVVFVINKEENRHKGFGFVTFESESAVDQAVGKHFHEICGKRVEAKR 177
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E EQD + +F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQEANEQDFKSFFMQFGRVVDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVEAALSRPLEIL-GKPIEVKKAQ 158
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E++ +F Q+G V ++ D TG+ RGF FVT+ ++ AV+ L+
Sbjct: 84 KIFVGGVSQEANEQDFKSFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSR 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+G K I+ K+ R N
Sbjct: 144 PLEILG-KPIEVKKAQPRGN 162
>gi|240849376|ref|NP_001155365.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
gi|49257602|gb|AAH74212.1| Unknown (protein for MGC:83385) [Xenopus laevis]
gi|157415960|gb|ABV54637.1| Vg1 mRNA binding protein 40 [Xenopus laevis]
Length = 326
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 96/158 (60%), Gaps = 2/158 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL +T +K++ DYF ++GEV +IK DP TG+SRGF F+ + +VD +L
Sbjct: 66 KMFVGGLSWDTSKKDLKDYFEKFGEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKVLEH 125
Query: 78 GDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + + IDPK+ + + P+K KIFVGGL E E +R+YF +G I + P D
Sbjct: 126 KEHRLDGRLIDPKKAMAMKKEPIK-KIFVGGLNPEAGEDKIREYFETFGEIEAVELPMDP 184
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F ++ ++L+ + G + ++K
Sbjct: 185 KTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIK 222
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ GE +I +YF +GE+E++ + DP T + RGF F+T+ ++ V +L
Sbjct: 149 KKIFVGGLNPEAGEDKIREYFETFGEIEAVELPMDPKTNKRRGFVFITFKEEEPVKKILE 208
Query: 77 AGDHYIGNKKIDPK 90
H + K + K
Sbjct: 209 KKFHNVSGSKCEIK 222
>gi|38327502|gb|AAR17782.1| CArG binding factor [Homo sapiens]
Length = 298
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 17 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 76
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 77 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 135
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 136 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 184
>gi|149046813|gb|EDL99587.1| heterogeneous nuclear ribonucleoprotein D-like, isoform CRA_b
[Rattus norvegicus]
Length = 300
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 20 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 79
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 80 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 138
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 187
>gi|5052976|gb|AAD38787.1|AF153444_1 hnRNP A/B related protein, partial [Felis catus]
Length = 279
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 102/168 (60%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A D K+FVGGL +T +K++ DYF+++GEV +IK P TG+S+GF F+ +
Sbjct: 55 NASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMVPNTGRSKGFGFILFKD 114
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+V+ +L +H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF ++G
Sbjct: 115 AASVEKVLDQKEHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGEFGE 173
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GF FI+F ++ +VL+ I G + ++K
Sbjct: 174 IEAIELPMDPKTNKRRGFVFITFKEEEPVKKVLEKKFHTISGSKCEIK 221
>gi|71896741|ref|NP_001026313.1| heterogeneous nuclear ribonucleoprotein D-like [Gallus gallus]
gi|82233707|sp|Q5ZI72.1|HNRDL_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like;
Short=hnRNP D-like; Short=hnRNP DL
gi|53136484|emb|CAG32571.1| hypothetical protein RCJMB04_29l7 [Gallus gallus]
Length = 301
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 21 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 80
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+V+ +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 81 AASVEKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 139
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 140 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 188
>gi|349604934|gb|AEQ00343.1| Heteroproteinous nuclear ribonucleoprotein D-like-like protein,
partial [Equus caballus]
Length = 297
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 16 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 75
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 76 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 134
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 135 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 183
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ +T E+ + YFS+YGE+ +I D TG+SRGF F+T+ +AVD++
Sbjct: 161 DSGKMFIGGLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPRAVDEV 220
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ DH + K IDPKR R K KIFVGG+ + E+D D+FSQ+G I + Q
Sbjct: 221 IKK-DHILDGKLIDPKRAIAREEQDKVGKIFVGGIDPLVNERDFNDFFSQFGHIIDAQLM 279
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF FI++D D+V N + GK ++VKR +
Sbjct: 280 IDKDTGRSRGFGFITYDSPEAVDRVCVNKYLTLKGKAMEVKRAE 323
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ E++ ND+FSQ+G + + D TG+SRGF F+TY + +AVD +
Sbjct: 248 KIFVGGIDPLVNERDFNDFFSQFGHIIDAQLMIDKDTGRSRGFGFITYDSPEAVDRVCVN 307
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 308 KYLTLKGKAMEVKRAEPR 325
>gi|341889790|gb|EGT45725.1| hypothetical protein CAEBREN_10423 [Caenorhabditis brenneri]
Length = 311
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 10/208 (4%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G D K+F+GGL T + + DYF ++GEV + DP T ++RGF F+T+ +V
Sbjct: 29 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 88
Query: 72 DDLLAAGDHYIGNKKID-----PKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
D +L A DH + KKID PKR ++ K+F+GGL+ T +D++ YF YG
Sbjct: 89 DKVLHARDHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 148
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
+ + +DK+ +GF F++FD VAD+V + I GK V+ K+ + P+ V
Sbjct: 149 VEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQ--PK---EV 203
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAY 214
V+ +R ++A Y P ++AY
Sbjct: 204 MLPVQLNKSRAAAARNLYGMPPETLLAY 231
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 99/161 (61%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+HY+ K IDPKR R + KIFVGG++ E TEQD + +F Q+G + + DK
Sbjct: 215 -EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDK 273
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 274 DSGRPRGFGFVTFDSEAAVEATLSGPLEIL-GKPIEVKKAQ 313
>gi|15010818|dbj|BAB62188.1| JKTBP1delta6 [Homo sapiens]
Length = 244
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 20 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 79
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 80 AASVDKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 138
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 139 EIENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 187
>gi|148235805|ref|NP_001079609.1| heterogeneous nuclear ribonucleoprotein D-like-A [Xenopus laevis]
gi|82241529|sp|Q7ZX83.1|HNDLA_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-A;
Short=hnRNP D-like A; Short=hnRNP DL-A
gi|28175291|gb|AAH45124.1| MGC53310 protein [Xenopus laevis]
Length = 293
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + DE K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 17 NASKNQQDEGKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKD 76
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+VD +L +H + K IDPKR K P K K+FVGGL+ E TE+ ++ YF +G
Sbjct: 77 AVSVDKVLETNEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPETTEEQIKQYFGGFG 135
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCF+++ + ++L++ I + ++K
Sbjct: 136 EIENIELPIDTKTNERRGFCFVTYTGEEPVKKLLESRFHQIGTGKCEIK 184
>gi|353241965|emb|CCA73743.1| probable heterogeneous nuclear ribonucleoprotein HRP1
[Piriformospora indica DSM 11827]
Length = 343
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 99/157 (63%), Gaps = 3/157 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL+ +T + + +YFSQ+G VE+ +I DP G+SRGFAF+T+ AV+ ++
Sbjct: 1 MFVGGLNWDTTDDGLRNYFSQFGRVEACTIMRDP-AGRSRGFAFLTFEDPAAVNKVMVQ- 58
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R + K+FVGGL +T + +++YF Q+G + + D+
Sbjct: 59 EHYLDGKIIDPKRAIPRTEHQRTVKMFVGGLAPSVTNEGLKEYFGQFGKVIDATVMVDRD 118
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ KGF F++FDDQ+ A+++ P I GK ++VK
Sbjct: 119 SSRSKGFGFVTFDDQSGAERLFGMPGLAIDGKTIEVK 155
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL + + + +YF Q+G+V ++ D + +S+GF FVT+ Q + L
Sbjct: 83 KMFVGGLAPSVTNEGLKEYFGQFGKVIDATVMVDRDSSRSKGFGFVTFDDQSGAERLFGM 142
Query: 78 GDHYIGNKKIDPKRVTKR 95
I K I+ K R
Sbjct: 143 PGLAIDGKTIEVKMAQPR 160
>gi|350540024|ref|NP_001232117.1| heterogeneous nuclear ribonucleoprotein D-like [Taeniopygia
guttata]
gi|197129483|gb|ACH45981.1| putative heterogeneous nuclear ribonucleoprotein D-like variant 1
[Taeniopygia guttata]
Length = 301
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV +
Sbjct: 21 NASKNQQDDGKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKD 80
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+V+ +L +H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 81 AASVEKVLELKEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFG 139
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 140 EIENIELPMDTKTNXRRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 188
>gi|150866885|ref|XP_001386627.2| hypothetical protein PICST_68431 [Scheffersomyces stipitis CBS
6054]
gi|149388141|gb|ABN68598.2| nuclear polyadenylated RNA-binding protein 4 [Scheffersomyces
stipitis CBS 6054]
Length = 481
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E+ + YFS++GEV +I D TG+SRGF F+T+ K+VD+++
Sbjct: 161 KMFIGGLNWDTTEEGLVSYFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDPKSVDEVIKT 220
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
DH + K IDPKR R K KIFVGG+ + E++ D+FSQ+GSI + Q DK
Sbjct: 221 -DHILDGKLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDK 279
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF FI+FD + D+V N + GK ++VKR +
Sbjct: 280 DSGRSRGFGFITFDSPDAVDRVTVNKFLTLKGKAMEVKRAE 320
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ EKE +D+FSQ+G + + D +G+SRGF F+T+ + AVD +
Sbjct: 245 KIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDSGRSRGFGFITFDSPDAVDRVTVN 304
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 305 KFLTLKGKAMEVKRAEPR 322
>gi|47228465|emb|CAG05285.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 100/166 (60%), Gaps = 6/166 (3%)
Query: 1 MSYRANGT---AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQS 57
M A+G+ A DE K+FVGGL +T +K++ DYF +YGEV ++K DP TG+S
Sbjct: 38 MGDEADGSRIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRS 97
Query: 58 RGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQ 115
RGF FV + ++V+ + + +H + K IDPK+ K P+K KIFVGGL+ + E+
Sbjct: 98 RGFGFVLFKDAESVEKVASQKEHKLNGKVIDPKKAKAMKGKEPVK-KIFVGGLSPDTPEE 156
Query: 116 DVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
VR+YF +G + + P + N ++GFCFI+F ++ +++
Sbjct: 157 KVREYFGAFGEVESIELPMETKTNKRRGFCFITFKEEEPVKCIMEK 202
>gi|190347776|gb|EDK40115.2| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ +T E+ + +YFS++GEV +I D TG+SRGF F+T+ K+VD ++ G
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVDAVIQ-G 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
DH + K IDPKR R K KIFVGG+ + E++ D+FSQ+GSI + Q DK
Sbjct: 60 DHVLDGKLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF FI+FD D+V N + GK ++VKR +
Sbjct: 120 TGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEVKRAE 159
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ EKE +D+FSQ+G + + D TG+SRGF F+T+ + +AVD +
Sbjct: 84 KIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAVDRVTVN 143
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 144 KFLTLKGKSMEVKRAEPR 161
>gi|146415028|ref|XP_001483484.1| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ +T E+ + +YFS++GEV +I D TG+SRGF F+T+ K+VD ++ G
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVDAVIQ-G 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
DH + K IDPKR R K KIFVGG+ + E++ D+FSQ+GSI + Q DK
Sbjct: 60 DHVLDGKLIDPKRAIAREEQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF FI+FD D+V N + GK ++VKR +
Sbjct: 120 TGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEVKRAE 159
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ EKE +D+FSQ+G + + D TG+SRGF F+T+ + +AVD +
Sbjct: 84 KIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAVDRVTVN 143
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 144 KFLTLKGKSMEVKRAEPR 161
>gi|133256|sp|P21522.1|ROA1_SCHAM RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog
gi|10107|emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schistocerca americana]
Length = 342
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+GE+ + + DP T +SRGF F+TY+ VDD
Sbjct: 17 RKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K+FVGG+ E+ E D+RDYF QYG++
Sbjct: 77 ARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVS 136
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D++ + I GK +DVK+
Sbjct: 137 AAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQIRGKHIDVKK 182
>gi|397525478|ref|XP_003832693.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Pan paniscus]
Length = 424
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 132/267 (49%), Gaps = 32/267 (11%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKE-INDYFSQYGEVESISIKNDPYTGQSRGFAF 62
R + + GPG E R GE E + +YF Q+GEV+ + DP T +SRGF F
Sbjct: 86 RPSASRGPGGRQE-------AQRERGEGEGLREYFGQFGEVKECLVMRDPLTKRSRGFGF 138
Query: 63 VTYTTQKAVDDLLAAGDHYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDV 117
VT+ Q VD +LA H + +K IDPK R ++ KIFVGGL+ T +DV
Sbjct: 139 VTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDV 198
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ YF Q+G + + FDK+ N +GF F++F+ +++ ++V + I K V+ K+ +
Sbjct: 199 KQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ 258
Query: 178 FNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYA 237
P+ + S +G+ RG + A+ G ++ YP G+ A +Y + +
Sbjct: 259 --PKEVMSPTGSARGRSRVMPYGMDAFMLGIG-MLGYP-----------GFQATTYASRS 304
Query: 238 TAYPGYDYSAMGYAYPAPAVQTMDTPL 264
Y A GY Y P + TPL
Sbjct: 305 -----YTGLAPGYTYQFPEFRVERTPL 326
>gi|348531962|ref|XP_003453476.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oreochromis niloticus]
Length = 315
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A G D K+FVGGL +T + ++ DYFS++GEV +IK D TG+SRGF FV +
Sbjct: 48 ASKGEEDAGKVFVGGLSWDTSKTDLKDYFSKFGEVSDCTIKMDSNTGRSRGFGFVLFKDS 107
Query: 69 KAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
+VD +L +H + + IDPKR + + +P+K KIFVGGL E TE+ +R+YF +G I
Sbjct: 108 ASVDKVLEQKEHRLDGRNIDPKRAMAMKKDPVK-KIFVGGLNPEATEETIREYFGAFGEI 166
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ P D ++GF FI++ ++ + L+ I G ++K
Sbjct: 167 ETIELPIDPKSKKRRGFIFITYKEETSVKKCLEKKYHNIQGGRCELK 213
>gi|116197887|ref|XP_001224755.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
gi|88178378|gb|EAQ85846.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
Length = 886
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 104/183 (56%), Gaps = 3/183 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 389 RKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDGATGRSRGFGFLTFKDPKTV-NIVM 447
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+HY+ K IDPKR R K KIFVGG++ E T+ + R+YF+Q+G + + D
Sbjct: 448 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMD 507
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGA 195
K +GF F++F+ + D L P + I GK ++VK+ + A RG
Sbjct: 508 KDTGRPRGFGFVTFESEAGVDACLATPLE-IHGKPIEVKKAQPRGNLRDEEDAARRGGAG 566
Query: 196 RVS 198
++
Sbjct: 567 AIN 569
>gi|171451954|dbj|BAG15905.1| DAZAP [Dugesia japonica]
Length = 354
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N+ KLFVGGLH++T + + YFS++G+V S+ D TG+SRGF +V Y+ +AV
Sbjct: 8 NEIGKLFVGGLHQSTTNESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQK 67
Query: 74 LLAAGDHYIGNKKIDPKRVT---KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+++ H++ K+IDPK K + + KIFVGG+ E E+ +RD+F Q+G+ITE
Sbjct: 68 VMST-KHHLEGKEIDPKPCNVNMKGRSRRQLKIFVGGIAPEHNEETLRDFFKQFGNITEL 126
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
D+S + +GF F++FDD+ V Q++ + I K+V++K
Sbjct: 127 TLMKDQSGHRHRGFAFVAFDDEAVVKQLINDHILTIGNKQVEIK 170
>gi|392863540|gb|EJB10655.1| musashi 1, variant [Coccidioides immitis RS]
Length = 608
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
G G ++ K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K
Sbjct: 105 GTGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPK 164
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V+ ++ +HY+ K IDPKR R + KIFVGG++ + EQD + +F Q+G +
Sbjct: 165 TVNTVMVK-EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQDANEQDFKKFFMQFGRVV 223
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 224 DATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEVKKAQ 271
>gi|410903808|ref|XP_003965385.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like isoform
3 [Takifugu rubripes]
Length = 264
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 100/166 (60%), Gaps = 6/166 (3%)
Query: 1 MSYRANGT---AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQS 57
M A+G+ A DE K+FVGGL +T +K++ DYF +YGEV ++K DP TG+S
Sbjct: 37 MGDEADGSRIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRS 96
Query: 58 RGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQ 115
RGF FV + ++V+ + + +H + K IDPK+ K P+K KIFVGGL+ + E+
Sbjct: 97 RGFGFVLFKEPESVEKVASQKEHKLNGKVIDPKKAKAMKGKEPVK-KIFVGGLSPDTPEE 155
Query: 116 DVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
VR+YF +G + + P + N ++GFCFI+F ++ +++
Sbjct: 156 KVREYFGAFGEVESIELPMETKTNKRRGFCFITFKEEEPVKCIMEK 201
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+F+GG+ +T E + DYF YG+V + I D TG++RGF FV + D
Sbjct: 3 SDHGKIFIGGISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADR 62
Query: 74 LLAAGDHYIGNKKIDPKRVTKR------------VNPLKCKIFVGGLTTEITEQDVRDYF 121
++ H I + ++ KRV R P KIFVGGL +TE D R YF
Sbjct: 63 VIQE-KHTIDGRAVEAKRVVPRDEQQNVQRTSNMAGPRTKKIFVGGLAPTVTEDDFRKYF 121
Query: 122 SQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
Q+G+IT+ +D + +GF FI++D ++ D+VL+ + K V+VKR P+
Sbjct: 122 EQFGNITDVVVMYDHTTQRHRGFGFITYDSEDAVDKVLQQTFHQLKEKTVEVKRAI--PK 179
Query: 182 TMGSVSGAVRGAGARVSSAGAAY 204
M G RG+ R +S GA Y
Sbjct: 180 DM--SPGNTRGSAGRGASYGAPY 200
>gi|340382092|ref|XP_003389555.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Amphimedon queenslandica]
Length = 344
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 8/169 (4%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D+ KLFVGGL +T E+ + +YF +YG + I +K DP TG+SRGFAF+ + AVD +
Sbjct: 55 DDHKLFVGGLTSDTTEQTLQEYFEEYGTISEIILKVDPITGRSRGFAFLLFKENDAVDKI 114
Query: 75 LAAGDHYIGNKKIDPKR-----VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
L A H IG+K +D K+ V +++ K+FVGG+ T++ E ++++F ++G I E
Sbjct: 115 LEASPHTIGDKVVDTKKAIPHAVHQQMKQRTKKVFVGGVPTDMPEHTIKEHFEKFGPIEE 174
Query: 130 FQQPFDK---SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+K S ++GFCF++F ++ A++ N I +V+VKR
Sbjct: 175 VALVTEKGAGSNKKRRGFCFVTFLSEDTAEKACCNSFHKINESDVEVKR 223
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 87 IDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCF 146
++P + V K+FVGGLT++ TEQ +++YF +YG+I+E D +GF F
Sbjct: 43 VEPMNINNDVPYDDHKLFVGGLTSDTTEQTLQEYFEEYGTISEIILKVDPITGRSRGFAF 102
Query: 147 ISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ F + + D++L+ I K VD K+
Sbjct: 103 LLFKENDAVDKILEASPHTIGDKVVDTKK 131
>gi|149046824|gb|EDL99598.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_g [Rattus
norvegicus]
Length = 208
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 93/145 (64%), Gaps = 3/145 (2%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL +T +K++ DYFS++G+V ++K DP TG+SRGF FV + ++VD ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 79 DHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G + + P D
Sbjct: 61 EHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKN 161
N ++GFCFI+F ++ ++++
Sbjct: 120 KTNKRRGFCFITFKEEEPVKKIMEK 144
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL +T E++I +YF +GEVESI + D T + RGF F+T+ ++ V ++
Sbjct: 84 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 143
Query: 77 AGDHYIGNKKIDPK 90
H +G K + K
Sbjct: 144 KKYHNVGLSKCEIK 157
>gi|410903804|ref|XP_003965383.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like isoform
1 [Takifugu rubripes]
Length = 314
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 100/165 (60%), Gaps = 6/165 (3%)
Query: 1 MSYRANGT---AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQS 57
M A+G+ A DE K+FVGGL +T +K++ DYF +YGEV ++K DP TG+S
Sbjct: 37 MGDEADGSRIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRS 96
Query: 58 RGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQ 115
RGF FV + ++V+ + + +H + K IDPK+ K P+K KIFVGGL+ + E+
Sbjct: 97 RGFGFVLFKEPESVEKVASQKEHKLNGKVIDPKKAKAMKGKEPVK-KIFVGGLSPDTPEE 155
Query: 116 DVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
VR+YF +G + + P + N ++GFCFI+F ++ +++
Sbjct: 156 KVREYFGAFGEVESIELPMETKTNKRRGFCFITFKEEEPVKCIME 200
>gi|297263669|ref|XP_001087753.2| PREDICTED: hypothetical protein LOC699286 [Macaca mulatta]
Length = 696
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 133/280 (47%), Gaps = 33/280 (11%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-R 91
+ +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA H + +K IDPK
Sbjct: 166 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 225
Query: 92 VTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
+R P KIFVGGL+ T +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 226 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFV 285
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAA 207
+F+ +++ ++V + I K V+ K K P+ + S +G+ RG
Sbjct: 286 TFESEDIVEKVCEIHFHEINNKMVECK--KAQPKEVMSPTGSARGR-------------- 329
Query: 208 PGRVVAYPSTYAGYAAADYGYTAGSYDAY-ATAYPGYDYSAM--GYAYPAPAVQTMDTPL 264
RV+ Y G A G Y + AT Y Y+ + GY Y P + TPL
Sbjct: 330 -SRVMPY-----GMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYTYQFPEFRVERTPL 383
Query: 265 ---VVMMHMLQHTLVMTIVQWVTHTLHQLLHMEEANYGYT 301
V+ + H LV + H+LL ++ +T
Sbjct: 384 PSAPVLPELTGHPLVTSGPVGERRGYHRLLSGLPGSHPWT 423
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 239 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 298
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 299 IHFHEINNKMVECKKAQPK 317
>gi|410903806|ref|XP_003965384.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like isoform
2 [Takifugu rubripes]
Length = 320
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 100/165 (60%), Gaps = 6/165 (3%)
Query: 1 MSYRANGT---AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQS 57
M A+G+ A DE K+FVGGL +T +K++ DYF +YGEV ++K DP TG+S
Sbjct: 37 MGDEADGSRIDASKNEEDEGKMFVGGLSWDTTKKDLKDYFCKYGEVVDCTLKLDPITGRS 96
Query: 58 RGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQ 115
RGF FV + ++V+ + + +H + K IDPK+ K P+K KIFVGGL+ + E+
Sbjct: 97 RGFGFVLFKEPESVEKVASQKEHKLNGKVIDPKKAKAMKGKEPVK-KIFVGGLSPDTPEE 155
Query: 116 DVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
VR+YF +G + + P + N ++GFCFI+F ++ +++
Sbjct: 156 KVREYFGAFGEVESIELPMETKTNKRRGFCFITFKEEEPVKCIME 200
>gi|149046822|gb|EDL99596.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_f [Rattus
norvegicus]
gi|149046823|gb|EDL99597.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_f [Rattus
norvegicus]
Length = 257
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 93/144 (64%), Gaps = 3/144 (2%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL +T +K++ DYFS++G+V ++K DP TG+SRGF FV + ++VD ++
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 79 DHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G + + P D
Sbjct: 61 EHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLK 160
N ++GFCFI+F ++ ++++
Sbjct: 120 KTNKRRGFCFITFKEEEPVKKIME 143
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL +T E++I +YF +GEVESI + D T + RGF F+T+ ++ V ++
Sbjct: 84 KKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIME 143
Query: 77 AGDHYIGNKKIDPK 90
H +G K + K
Sbjct: 144 KKYHNVGLSKCEIK 157
>gi|406860631|gb|EKD13688.1| hypothetical protein MBM_07889 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 453
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 99/160 (61%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV ++ D +G+SRGF F+T+ + V +++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTV-NIVMVK 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R + KIFVGG++ E TEQD ++YF Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKEYFMQFGRVVDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + D L +P +++ GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVDACLDSPLEIL-GKPIEVKKAQ 158
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E++ +YF Q+G V ++ D TG+ RGF FVT+ ++ AVD L +
Sbjct: 84 KIFVGGVSQEATEQDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVDACLDS 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+G K I+ K+ R N
Sbjct: 144 PLEILG-KPIEVKKAQPRGN 162
>gi|313240342|emb|CBY32684.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 107/185 (57%), Gaps = 8/185 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL NT E ++++FS++G++ + DP T +SRGF FVT+ + VDD ++
Sbjct: 12 RKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQMVDDCMS 71
Query: 77 AGDHYIGNKKIDPKRVTKR-------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
H + ++++ KR R ++ ++F+GG+ +T +DV +YF +YG +
Sbjct: 72 NRPHKLDGREVEAKRAVSREESHRPGIHKSVKRMFMGGIKENVTSEDVTEYFEKYGKVES 131
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ DK+ K+GF F++FDD +V D++++ + VI G ++V + F+ E +G
Sbjct: 132 VELLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVISGVSIEVSKA-FSKEDQTRKAGF 190
Query: 190 VRGAG 194
V G
Sbjct: 191 VNNNG 195
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 111/199 (55%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF+ +G V + I DP T +SRGF F+T+ VD +L
Sbjct: 227 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 286
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + +V+ YFSQ+G++ E
Sbjct: 287 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGAVEETVML 346
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 347 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 404
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G AAPG+++
Sbjct: 405 RIMLGTLGVQLPAAPGQLL 423
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 311 NKTKKIFVGGVSQDTSADEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 370
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 371 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 415
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + + +++YF+ +G++T+ D +GF FI+F + D
Sbjct: 222 DPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVD 281
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 282 KVLKVPIHTLDGKKIDPK 299
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 110/199 (55%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ VD +L
Sbjct: 200 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 259
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G++ E
Sbjct: 260 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVML 319
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 320 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 377
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 378 RIMLGTLGVQLPTAPGQLI 396
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 284 NKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 343
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 344 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 388
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + D
Sbjct: 195 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVD 254
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 255 KVLKVPIHTLDGKKIDPK 272
>gi|313226215|emb|CBY21358.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 107/185 (57%), Gaps = 8/185 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL NT E ++++FS++G++ + DP T +SRGF FVT+ + VDD ++
Sbjct: 12 RKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQMVDDCMS 71
Query: 77 AGDHYIGNKKIDPKRVTKR-------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
H + ++++ KR R ++ ++F+GG+ +T +DV +YF +YG +
Sbjct: 72 NRPHKLDGREVEAKRAVSREESHRPGIHKSVKRMFMGGIKENVTSEDVTEYFEKYGKVES 131
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ DK+ K+GF F++FDD +V D++++ + VI G ++V + F+ E +G
Sbjct: 132 VELLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVISGVSIEVSKA-FSKEDQTRKAGF 190
Query: 190 VRGAG 194
V G
Sbjct: 191 VNNNG 195
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 99/161 (61%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 155 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 214
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+HY+ K IDPKR R + KIFVGG++ E TEQD + +F Q+G + + DK
Sbjct: 215 -EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDK 273
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 274 DSGRPRGFGFVTFDSEAAVEATLSGPLEIL-GKPIEVKKAQ 313
>gi|50294199|ref|XP_449511.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528825|emb|CAG62487.1| unnamed protein product [Candida glabrata]
Length = 513
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 100/161 (62%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T E + +YFS+YG V + I DP TG+SRGF F+++ +VD+++
Sbjct: 131 KMFIGGLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFGFLSFDAPSSVDEVVKT 190
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGGL T++ ++ +YFSQ+G+I + Q DK
Sbjct: 191 -QHILDGKVIDPKRAIPREEQDKTGKIFVGGLGTDVRPKEFEEYFSQWGTIIDAQLMLDK 249
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + A++V ++ + GK++++KR +
Sbjct: 250 DTGRSRGFGFVTYDSPDAAEKVCESRYREFKGKQIEIKRAE 290
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 90 KRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISF 149
++V ++ CK+F+GGL E TE +R+YFS+YG++ E + D + +GF F+SF
Sbjct: 119 RQVKADLSRENCKMFIGGLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFGFLSF 178
Query: 150 DDQNVADQVLKNPKQVICGKEVDVKRV 176
D + D+V+K + ++ GK +D KR
Sbjct: 179 DAPSSVDEVVKT-QHILDGKVIDPKRA 204
>gi|440632909|gb|ELR02828.1| hypothetical protein GMDG_05764 [Geomyces destructans 20631-21]
Length = 544
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
GPG ++ K+F+GGL+ T ++ + DYFSQ+GEV ++ D +G+SRGF F+T+ +
Sbjct: 95 GPGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGASGRSRGFGFLTFKDAR 154
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V +++ +HY+ K IDPKR R + KIFVGG++ E +E D ++YF Q+G +
Sbjct: 155 TV-NVVMVKEHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEASELDFKEYFMQFGRVV 213
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++FD + D + P +++ GK ++VK+ +
Sbjct: 214 DATLMMDKDTGRPRGFGFVTFDSEAAVDACINIPLEIL-GKPIEVKKAQ 261
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 114/236 (48%), Gaps = 24/236 (10%)
Query: 16 ERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLL 75
RKLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +L
Sbjct: 98 RRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 157
Query: 76 AAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQD 116
A+ H + + IDPK T R + P + KIFVGG+ E +
Sbjct: 158 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETE 217
Query: 117 VRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
+R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR
Sbjct: 218 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA 277
Query: 177 KFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTY-AGYAAADYGYTAG 231
E S + A AGA + A +AA G P T+ GY AG
Sbjct: 278 ----EPRDSKNQAPGQAGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAG 329
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 7/184 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+F+GGL T + + +YFS++G+V + + DP T +SRGF FVT+ +VD +LA
Sbjct: 2 RKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLA 61
Query: 77 AGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
+ H + KKIDPK +R +P KIFVGGL+ T DV+ YF Q+G + +
Sbjct: 62 SAPHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPSTVDDVKGYFEQFGRVEDAM 121
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVR 191
FDK N +GF F++F+ ++V D+V + I K V+ K+ + P+ + A R
Sbjct: 122 LMFDKQTNRHRGFAFVTFESEDVVDKVCEIHFHEINNKMVECKKAQ--PKEVMLPVNAAR 179
Query: 192 GAGA 195
G A
Sbjct: 180 GRAA 183
>gi|346326836|gb|EGX96432.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 525
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D+ K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V ++
Sbjct: 113 DDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTV-NI 171
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ +HY+ K IDPKR R K KIFVGG++ + T+Q+ R++F+Q+G + +
Sbjct: 172 VMVKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFREFFAQFGRVIDATLM 231
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++F+ + D + P + I GK ++VKR +
Sbjct: 232 MDKDTGRPRGFGFVTFESEAGVDACINIPLE-IHGKPIEVKRAQ 274
>gi|17554332|ref|NP_497799.1| Protein MSI-1 [Caenorhabditis elegans]
gi|10047307|dbj|BAB13470.1| neural RNA-binding protein MSI-1 [Caenorhabditis elegans]
gi|18376536|emb|CAA84667.2| Protein MSI-1 [Caenorhabditis elegans]
Length = 320
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G D K+F+GGL T + + DYF ++GEV + DP T ++RGF F+T+ +V
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 72 DDLLAAGDHYIGNKKID-----PKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
D +L +H + KKID PKR ++ K+F+GGL+ T +D++ YF YG
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
+ + FDK+ +GF F++FD VAD+V + I GK V+ K+ + P+ V
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQ--PK---EV 214
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAY 214
V+ +R ++A Y P ++AY
Sbjct: 215 MLPVQLNKSRAAAARNLYGMPPETLLAY 242
>gi|146197795|dbj|BAF57615.1| DAZ-associated protein [Dugesia japonica]
Length = 296
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 103/164 (62%), Gaps = 4/164 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N+ KLFVGGLH++T + + YFS++G+V S+ D TG+SRGF +V Y+ +AV
Sbjct: 12 NEIGKLFVGGLHQSTTNESLKSYFSKFGDVVEASVMMDHRTGRSRGFGYVRYSDNEAVQK 71
Query: 74 LLAAGDHYIGNKKIDPKRVT---KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+++ H++ K+IDPK K + + KIFVGG+ E E+ +RD+F Q+G+ITE
Sbjct: 72 VMST-KHHLEGKEIDPKPCNVNMKGRSRRQLKIFVGGIAPEHNEETLRDFFKQFGNITEL 130
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
D+S + +GF F++FDD+ V Q++ + I K+V++K
Sbjct: 131 TLMKDQSGHRHRGFAFVAFDDEAVVKQLINDHILTIGNKQVEIK 174
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 98/171 (57%), Gaps = 6/171 (3%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
P + ++KLFVGGL+ T E + Y+SQ+GE+ + + DP + +SRGF FVT+ +
Sbjct: 7 PKADQDKKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASS 66
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKR------VNPLKCKIFVGGLTTEITEQDVRDYFSQY 124
VD A H + K +D KR R V+ KIFVGGL ++T +D+ +YF ++
Sbjct: 67 VDKAQADRPHKVDGKDVDSKRAMPREETSPEVHAAVKKIFVGGLKKDVTNEDLAEYFGKF 126
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
G++T+ K N +GF F++FDD + D+V+ +I G + DV++
Sbjct: 127 GNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVILARPHMIGGHKADVRK 177
>gi|223648642|gb|ACN11079.1| Heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
Length = 301
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T + ++ DY S++GEV +IK D TG+SRGF FV +
Sbjct: 21 NASKNQQDDGKMFIGGLSWDTSKTDLTDYLSKFGEVLDCTIKTDLMTGRSRGFGFVLFRD 80
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
++VD +L +H + K IDPKR K P K K+FVGGL+ + E+++R+YF +G
Sbjct: 81 SESVDRVLELKEHKLDGKLIDPKRAKAMKGKEPPK-KVFVGGLSPDTPEEEIREYFGAFG 139
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNP-KQVICGK-EVDVKRVKFNPETM 183
I + P D N ++GFCF+++ ++ ++L+ QV GK E+ V + K
Sbjct: 140 DIDSIELPMDTKTNERRGFCFVTYCEETPVQKLLECRYHQVGSGKCEIKVAQPK-EVYRQ 198
Query: 184 GSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGY 243
RG G G Y Y GY + +YG Y+ Y GY
Sbjct: 199 QQQHRGERGGYEGGRGGGGYRGRGRGGQSNYNQGYNGYYSQNYGSYGNGYNQGYNGYAGY 258
Query: 244 DYSAMGY 250
DYS Y
Sbjct: 259 DYSGYNY 265
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 111/199 (55%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF+ +G V + I DP T +SRGF F+T+ VD +L
Sbjct: 222 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 281
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G++ E
Sbjct: 282 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVML 341
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 342 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 399
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 400 RIMLGTLGVQLPTAPGQLL 418
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 306 NKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 365
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 366 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 410
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + + +++YF+ +G++T+ D +GF FI+F + D
Sbjct: 217 DPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVD 276
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 277 KVLKVPIHTLDGKKIDPK 294
>gi|403213324|emb|CCK67826.1| hypothetical protein KNAG_0A01370 [Kazachstania naganishii CBS
8797]
Length = 545
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 108/196 (55%), Gaps = 13/196 (6%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ T E + +YF++YG V + I DP +G+SRGF F+T+ +VD++
Sbjct: 155 DNCKMFIGGLNWETTEDGLREYFNKYGHVIDLKIMKDPNSGRSRGFGFLTFEEPSSVDEV 214
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR R K KIFVGG+ ++ ++ ++FSQYG+I + Q
Sbjct: 215 VKT-QHILDGKVIDPKRSIPREEQDKTGKIFVGGIGADVRPKEFEEFFSQYGTIIDAQLM 273
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK-----------FNPET 182
DK +GF F+++D D+V +N GK++++KR + NP
Sbjct: 274 LDKDTGRSRGFGFVTYDSPEAVDRVCQNKYIDFKGKQIEIKRAEPRHMQKGQYGGANPNN 333
Query: 183 MGSVSGAVRGAGARVS 198
GS SG+ GA ++
Sbjct: 334 RGSTSGSAPVTGANMT 349
>gi|119193228|ref|XP_001247220.1| hypothetical protein CIMG_00991 [Coccidioides immitis RS]
Length = 506
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 98/161 (60%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 11 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 70
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+HY+ K IDPKR R + KIFVGG++ + EQD + +F Q+G + + DK
Sbjct: 71 -EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDK 129
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 130 DTGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEVKKAQ 169
>gi|432878673|ref|XP_004073373.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oryzias latipes]
Length = 330
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 98/166 (59%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A G D K+FVGGL +T +K++ DYFS++GEV +IK D TG+SRGF F+ +
Sbjct: 64 ASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDA 123
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
+VD +L +H + ++IDPKR + KIFVGGL +++++++ +YF +G I
Sbjct: 124 ASVDKVLEQKEHRLDGRQIDPKRAMAMKKEIVKKIFVGGLKPDLSKEEIEEYFGAFGEIE 183
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ P D ++GF FI++ ++ +VL+ + G + ++K
Sbjct: 184 TIELPQDPKTEKRRGFVFITYKEEPSVKKVLEKKYHTVGGSKCEIK 229
>gi|213511366|ref|NP_001133116.1| heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
gi|197631983|gb|ACH70715.1| heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
gi|221221618|gb|ACM09470.1| Heterogeneous nuclear ribonucleoprotein D-like [Salmo salar]
Length = 283
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 125/247 (50%), Gaps = 6/247 (2%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A + D+ K+F+GGL +T + ++ DY S++GEV +IK D TG+SRGF FV +
Sbjct: 21 NASKNQQDDGKMFIGGLSWDTSKTDLTDYLSKFGEVLDCTIKTDLMTGRSRGFGFVLFRD 80
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
++VD +L +H + K IDPKR K P K K+FVGGL+ + E+++R+YF +G
Sbjct: 81 SESVDRVLELKEHKLDGKLIDPKRAKAMKGKEPPK-KVFVGGLSPDTPEEEIREYFGAFG 139
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNP-KQVICGK-EVDVKRVKFNPETM 183
I + P D N ++GFCF+++ ++ ++L+ QV GK E+ V + K
Sbjct: 140 DIDSIELPMDTKTNERRGFCFVTYCEETPVQKLLECRYHQVGSGKCEIKVAQPK-EVYRQ 198
Query: 184 GSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGY 243
RG G G Y Y GY + +YG Y+ Y GY
Sbjct: 199 QQQHRGERGGYEGGRGGGGYRGRGRGGQSNYNQGYNGYYSQNYGSYGNGYNQGYNGYAGY 258
Query: 244 DYSAMGY 250
DYS Y
Sbjct: 259 DYSGYNY 265
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 5/165 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++++YF +G+V + I DP T +SRGF F+T+ +VD +L
Sbjct: 103 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVLKV 162
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + KKIDPK T + P KIFVGG++ + + ++VR YFSQ+G + E
Sbjct: 163 PIHTLDGKKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVRQYFSQFGKVDETVM 222
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ +GF F++F++++V D+V + I K+V+ K+ +
Sbjct: 223 LMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ 267
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G+V+ + D T + RGF FVT+ + VD
Sbjct: 188 NKTKKIFVGGVSQDTSAEEVRQYFSQFGKVDETVMLMDQQTKRHRGFGFVTFENEDVVDR 247
Query: 74 LLAAGDHYIGNKKIDPKRVTKR--VNP-----LKCKIFVGGLTTEI 112
+ H I NKK++ K+ + V P L+ +I +G L I
Sbjct: 248 VCEIHFHTIKNKKVECKKAQPKEAVTPTAQQLLQKRIILGNLGLPI 293
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + + + +YF +G +T+ D +GF FI+F + N D
Sbjct: 98 DPAPGKLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVD 157
Query: 157 QVLKNPKQVICGKEVDVKRV--KFNPET 182
+VLK P + GK++D K K P+T
Sbjct: 158 KVLKVPIHTLDGKKIDPKHATPKNRPKT 185
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D+ K+F+GGL+ T E+ + +YFSQ+G+V ++I D TG+SRGF F+T+ + +VD++
Sbjct: 104 DQGKMFIGGLNWETTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSVDEV 163
Query: 75 LAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
L H + K IDPKR + K KIFVGG+ E+TE + +YF Q+G+I + Q
Sbjct: 164 LKK-THVLDGKLIDPKRAIPKEEQDKTGKIFVGGVAPEVTEAEFTEYFQQFGNIIDSQLM 222
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +G+ F+++D + D+V +N + GK +++KR +
Sbjct: 223 LDKDTGRSRGYGFVTYDSPDAVDRVTQNKYVLFHGKNMEIKRAE 266
>gi|313240275|emb|CBY32620.1| unnamed protein product [Oikopleura dioica]
Length = 331
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 93/162 (57%), Gaps = 4/162 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+++ K+FVGGL R+T + + YF +G + S+K D T QSRGF F+ + +VD
Sbjct: 53 SNDSKMFVGGLSRSTTTESLRTYFESFGALRDASVKIDTMTQQSRGFGFILFEDAASVDA 112
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
++A +H + KKIDPK+ +R K+FVGG+ E T+Q ++DYF +YG + +P
Sbjct: 113 VMATPEHILDGKKIDPKKAERR----DGKMFVGGILAETTDQTIKDYFGKYGEVEAVDRP 168
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK+ KGFCF++F V V ++ I GK + K
Sbjct: 169 VDKATGNYKGFCFVTFKRDGVMKTVCRDRYHEIDGKRCETKE 210
>gi|313214667|emb|CBY40970.1| unnamed protein product [Oikopleura dioica]
Length = 328
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 93/162 (57%), Gaps = 4/162 (2%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+++ K+FVGGL R+T + + YF +G + S+K D T QSRGF F+ + +VD
Sbjct: 53 SNDSKMFVGGLSRSTTTESLRTYFESFGALRDASVKIDTMTQQSRGFGFILFEDAASVDA 112
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
++A +H + KKIDPK+ +R K+FVGG+ E T+Q ++DYF +YG + +P
Sbjct: 113 VMATPEHILDGKKIDPKKAERR----DGKMFVGGILAETTDQTIKDYFGKYGEVEAVDRP 168
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK+ KGFCF++F V V ++ I GK + K
Sbjct: 169 VDKATGNYKGFCFVTFKRDGVMKTVCRDRYHEIDGKRCETKE 210
>gi|156376666|ref|XP_001630480.1| predicted protein [Nematostella vectensis]
gi|156217502|gb|EDO38417.1| predicted protein [Nematostella vectensis]
Length = 305
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 133/262 (50%), Gaps = 12/262 (4%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
S +N T +D KLFVGGL T ++ + +YFS+YGE+ + IK D TG+ RGFA
Sbjct: 14 SLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFA 73
Query: 62 FVTYTTQKAVDDLLAAGD-HYIGNKKIDPKRVTKRVNP--LKC-KIFVGGLTTEITEQDV 117
FV + Q D +L D H + + IDPK P L+ KIFVGGL E +++ +
Sbjct: 74 FVQFKHQSEADAVLNQVDPHVLDGRTIDPKPAAPIGKPPHLRVKKIFVGGLKPETSDEKI 133
Query: 118 RDYFSQ-YGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
R+YF + Y + E + + S N ++GFCF+SFD ++ D++ + I G +V+VKR
Sbjct: 134 REYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRA 193
Query: 177 ---KFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSY 233
+ + + A RG + + G + G AYPS A Y A A
Sbjct: 194 LPKEVQQQQAALRAAAGRGIIPALGTLGPRVGLSTG---AYPSYTALYGAFGANAAAFDP 250
Query: 234 DAYATAY-PGYDYSAMGYAYPA 254
Y +Y PG +A AYPA
Sbjct: 251 ALYGASYVPGLSPAAYSTAYPA 272
>gi|426219507|ref|XP_004003963.1| PREDICTED: uncharacterized protein LOC101101951 [Ovis aries]
Length = 503
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 94/147 (63%), Gaps = 5/147 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV + +VD +L
Sbjct: 292 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 351
Query: 78 GDHYIGNKKIDPKRVTKRVN---PLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
+H + K IDPKR K +N P K K+FVG L+ + +E+ +++YF +G I + P
Sbjct: 352 KEHKLDGKLIDPKRA-KALNGKEPPK-KVFVGVLSPDTSEEQIKEYFGAFGEIENIELPM 409
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKN 161
D N ++GFCFI++ D+ ++L++
Sbjct: 410 DTKTNERRGFCFITYTDEEPVKKLLES 436
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G+ +K+FVG L +T E++I +YF +GE+E+I + D T + RGF F+TYT ++ V
Sbjct: 371 GKEPPKKVFVGVLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPV 430
Query: 72 DDLLAAGDHYIGNKKIDPK 90
LL + H IG+ K + K
Sbjct: 431 KKLLESRYHQIGSGKCEIK 449
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+F+GGL+ + +++D+ +Y S++G + + D +GF F+ F D D+VL+
Sbjct: 292 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLEL 351
Query: 162 PKQVICGKEVDVKRVK 177
+ + GK +D KR K
Sbjct: 352 KEHKLDGKLIDPKRAK 367
>gi|449276581|gb|EMC85043.1| Heterogeneous nuclear ribonucleoprotein D-like protein, partial
[Columba livia]
Length = 271
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 98/159 (61%), Gaps = 3/159 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV + +V+ +L
Sbjct: 1 KMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLEL 60
Query: 78 GDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G I + P D
Sbjct: 61 KEHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMD 119
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 120 TKTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 158
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G+ +K+FVGGL +T E++I +YF +GE+E+I + D T + RGF F+TYT ++ V
Sbjct: 80 GKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPV 139
Query: 72 DDLLAAGDHYIGNKKIDPK 90
LL + H IG+ K + K
Sbjct: 140 KKLLESRYHQIGSGKCEIK 158
>gi|148235301|ref|NP_001084608.1| heterogeneous nuclear ribonucleoprotein D-like-B [Xenopus laevis]
gi|82237179|sp|Q6NU14.1|HNDLB_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like-B;
Short=hnRNP D-like B; Short=hnRNP DL-B
gi|46249880|gb|AAH68788.1| MGC81335 protein [Xenopus laevis]
Length = 291
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 97/159 (61%), Gaps = 3/159 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV + +VD +L
Sbjct: 35 KMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGFVLFKDAVSVDKVLET 94
Query: 78 GDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+H + K IDPKR + P K K+FVGGL+ E TE+ ++ YF +G I + P D
Sbjct: 95 KEHKLDGKLIDPKRAKALQGKEPPK-KVFVGGLSPETTEEQIKQYFGGFGEIENIELPMD 153
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GFCF+++ D+ ++L++ I + ++K
Sbjct: 154 TKTNERRGFCFVTYTDEEPVQKLLESRFHQIGTGKCEIK 192
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G+ +K+FVGGL T E++I YF +GE+E+I + D T + RGF FVTYT ++ V
Sbjct: 114 GKEPPKKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTDEEPV 173
Query: 72 DDLLAAGDHYIGNKKIDPK 90
LL + H IG K + K
Sbjct: 174 QKLLESRFHQIGTGKCEIK 192
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 91 RVTKRVNP----LKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCF 146
R K NP ++ K+F+GGL+ + +++D+ +Y S++G + + D +GF F
Sbjct: 20 RRHKESNPDFFLIRSKMFIGGLSWDTSKKDLTEYLSRFGEVLDCTIKTDPVTGRSRGFGF 79
Query: 147 ISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ F D D+VL+ + + GK +D KR K
Sbjct: 80 VLFKDAVSVDKVLETKEHKLDGKLIDPKRAK 110
>gi|189241702|ref|XP_966757.2| PREDICTED: similar to hrp48.1 [Tribolium castaneum]
Length = 400
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 99/170 (58%), Gaps = 6/170 (3%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N+E KLFVGGL T + + +FS+YGEV + + +G+SRGF FVT++ V+
Sbjct: 12 NNETKLFVGGLSWETTQDNLQRFFSRYGEVIDCVVMKNAESGRSRGFGFVTFSDPANVNT 71
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGSI 127
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F+++G +
Sbjct: 72 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYPKVFLGGLPSNVTETDLRTFFTRFGKV 131
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF+D+ D+ + + GK+V++K+ +
Sbjct: 132 MEVVIMYDQEKKKSRGFGFLSFEDEESVDRCVSEHFVNLNGKQVEIKKAE 181
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 100/163 (61%), Gaps = 2/163 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ T E + DYFS+YG+VE + I DP TG+SRGF F+T+ + +VD++
Sbjct: 120 DSCKMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFESASSVDEV 179
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR R K KIFVGG+ ++ ++ ++F+Q+G+I + Q
Sbjct: 180 VKT-QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLM 238
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
DK +GF FI++D + D+V +N G+++++KR
Sbjct: 239 LDKDTGRSRGFGFITYDTPDAVDKVCQNKFIDFKGRKIEIKRA 281
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 111/199 (55%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF+ +G V + I DP T +SRGF F+T+ VD +L
Sbjct: 187 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 246
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G++ E
Sbjct: 247 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVML 306
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 307 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 364
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 365 RIMLGTLGVQLPTAPGQLL 383
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 271 NKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 330
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 331 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 375
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + + +++YF+ +G++T+ D +GF FI+F + D
Sbjct: 182 DPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVD 241
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 242 KVLKVPIHTLDGKKIDPK 259
>gi|226472204|emb|CAX77138.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 6/168 (3%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+ ++KLF+GGL T E + DY+ Q+GE+ + + DP + +SRGF FVTY +VD
Sbjct: 11 DQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFVFVTYRDASSVDA 70
Query: 74 LLAAGDHYIGNKKIDPKRVTKR------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
H + K++D KR R V+ KIFVG L ++T +D+ DYFSQ+G++
Sbjct: 71 AQNNRPHTVDGKEVDTKRAMPREETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTV 130
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
T+ Q K N +GF F++FDD + D+V+ I + DV++
Sbjct: 131 TDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKADVRK 178
>gi|448522704|ref|XP_003868757.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis Co 90-125]
gi|380353097|emb|CCG25853.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis]
Length = 488
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ +T E+ + +YFS++GE+ +I D TG+SRGF F+T+ AVD +
Sbjct: 169 DSGKMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVD-V 227
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ DH + K IDPKR R + + KIF+GG+ ++E + D+FS++G+I + Q
Sbjct: 228 VIKQDHILDGKLIDPKRAISREDQDRVGKIFIGGIDPMVSENEFNDFFSKFGTIIDCQLM 287
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK +GF FI+FD + D+V N + GK ++VKR
Sbjct: 288 IDKDTGRSRGFGFITFDSPDAVDRVCVNKFLTLKGKAMEVKR 329
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GG+ E E ND+FS++G + + D TG+SRGF F+T+ + AVD +
Sbjct: 256 KIFIGGIDPMVSENEFNDFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVN 315
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 316 KFLTLKGKAMEVKRAAPR 333
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 90 KRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISF 149
K+ + K+F+GGL + TE+ + +YFS++G IT++ D + +GF F++F
Sbjct: 160 KQAVSEIGKDSGKMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTF 219
Query: 150 DDQNVADQVLKNPKQVICGKEVDVKR 175
D + D V+K ++ GK +D KR
Sbjct: 220 KDPSAVDVVIKQ-DHILDGKLIDPKR 244
>gi|226472210|emb|CAX77141.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 6/168 (3%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+ ++KLF+GGL T E + DY+ Q+GE+ + + DP + +SRGF FVTY +VD
Sbjct: 11 DQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVDA 70
Query: 74 LLAAGDHYIGNKKIDPKRVTKR------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
H + K++D KR R V+ KIFVG L ++T +D+ DYFSQ+G++
Sbjct: 71 AQNNRPHTVDGKEVDTKRAMPREETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTV 130
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
T+ Q K N +GF F++FDD + D+V+ I + DV++
Sbjct: 131 TDAQIVIAKETNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKADVRK 178
>gi|56758132|gb|AAW27206.1| SJCHGC06052 protein [Schistosoma japonicum]
gi|226472196|emb|CAX77134.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472198|emb|CAX77135.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472200|emb|CAX77136.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472202|emb|CAX77137.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472206|emb|CAX77139.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472208|emb|CAX77140.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472212|emb|CAX77142.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472214|emb|CAX77143.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472216|emb|CAX77144.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472220|emb|CAX77146.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472222|emb|CAX77147.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226473414|emb|CAX71392.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 6/168 (3%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+ ++KLF+GGL T E + DY+ Q+GE+ + + DP + +SRGF FVTY +VD
Sbjct: 11 DQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVDA 70
Query: 74 LLAAGDHYIGNKKIDPKRVTKR------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
H + K++D KR R V+ KIFVG L ++T +D+ DYFSQ+G++
Sbjct: 71 AQNNRPHTVDGKEVDTKRAMPREETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTV 130
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
T+ Q K N +GF F++FDD + D+V+ I + DV++
Sbjct: 131 TDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKADVRK 178
>gi|194390304|dbj|BAG61914.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 98/158 (62%), Gaps = 3/158 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV + +VD +L
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 79 DHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + +K IDPKR K P K K+FVGGL+ + +E+ +++YF +G I + P D
Sbjct: 61 EHKLDSKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 120 KTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 157
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G+ +K+FVGGL +T E++I +YF +GE+E+I + D T + RGF F+TYT ++ V
Sbjct: 79 GKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPV 138
Query: 72 DDLLAAGDHYIGNKKIDPK 90
LL + H IG+ K + K
Sbjct: 139 KKLLESRYHQIGSGKCEIK 157
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R + KIFVGG++ + TEQD + +F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQDATEQDFKKFFMQFGRVVDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEVKKAQ 158
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 11 PGRNDER--KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
P ER K+FVGG+ ++ E++ +F Q+G V ++ D TG+ RGF FVT+ ++
Sbjct: 75 PRDEQERTSKIFVGGVSQDATEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSE 134
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKRVN 97
AV+ L+ +G K I+ K+ R N
Sbjct: 135 AAVEACLSQPLEILG-KPIEVKKAQPRGN 162
>gi|378734179|gb|EHY60638.1| hypothetical protein HMPREF1120_08590 [Exophiala dermatitidis
NIH/UT8656]
Length = 455
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 97/160 (60%), Gaps = 2/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ ++DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLHDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H++ K IDPKR R K KIFVGG++ + TE+D +F+Q+G + + DK
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEKTAKIFVGGVSQDATEEDFESFFAQFGRVIDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD ++ L+ I GK ++VKR +
Sbjct: 120 TGRPRGFGFVTFDSDAAVERCLEYHPLEILGKPIEVKRAQ 159
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ ++ E++ +F+Q+G V ++ D TG+ RGF FVT+ + AV+ L
Sbjct: 84 KIFVGGVSQDATEEDFESFFAQFGRVIDATLMMDKDTGRPRGFGFVTFDSDAAVERCLEY 143
Query: 78 GDHYIGNKKIDPKRVTKR 95
I K I+ KR R
Sbjct: 144 HPLEILGKPIEVKRAQPR 161
>gi|354497787|ref|XP_003511000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Cricetulus griseus]
gi|344249844|gb|EGW05948.1| Heterogeneous nuclear ribonucleoprotein D-like [Cricetulus griseus]
Length = 271
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 3/158 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV + +VD +L
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 79 DHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G I + P D
Sbjct: 61 EHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 120 KTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 157
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G+ +K+FVGGL +T E++I +YF +GE+E+I + D T + RGF F+TYT ++ V
Sbjct: 79 GKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPV 138
Query: 72 DDLLAAGDHYIGNKKIDPK 90
LL + H IG+ K + K
Sbjct: 139 KKLLESRYHQIGSGKCEIK 157
>gi|149521754|ref|XP_001512512.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like isoform 1
[Ornithorhynchus anatinus]
gi|338723434|ref|XP_003364726.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Equus
caballus]
gi|426231939|ref|XP_004009994.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Ovis
aries]
gi|2547076|dbj|BAA22860.1| A+U-rich element RNA binding factor [Homo sapiens]
Length = 271
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 3/158 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV + +VD +L
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELK 60
Query: 79 DHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G I + P D
Sbjct: 61 EHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 120 KTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 157
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G+ +K+FVGGL +T E++I +YF +GE+E+I + D T + RGF F+TYT ++ V
Sbjct: 79 GKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPV 138
Query: 72 DDLLAAGDHYIGNKKIDPK 90
LL + H IG+ K + K
Sbjct: 139 KKLLESRYHQIGSGKCEIK 157
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + +YFSQ+GEV ++ D +G+SRGF F+T+ + V +++
Sbjct: 1 MFIGGLNWETTDESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTV-NIVMVK 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R + KIFVGG++ E TEQD + YF Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQDFKQYFMQFGRVVDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L+ P +++ GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVEACLEGPLEIL-GKPIEVKKAQ 158
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E++ YF Q+G V ++ D TG+ RGF FVT+ ++ AV+ L
Sbjct: 84 KIFVGGVSQEATEQDFKQYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAVEACLEG 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+G K I+ K+ R N
Sbjct: 144 PLEILG-KPIEVKKAQPRGN 162
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 235
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 236 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 295
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 296 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 353
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 354 RIMLGTLGVQLPTAPGQLI 372
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 260 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 319
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 320 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 364
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 171 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 230
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 231 KVLKVPIHTLDGKKIDPK 248
>gi|268536918|ref|XP_002633594.1| C. briggsae CBR-SQD-1 protein [Caenorhabditis briggsae]
Length = 301
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 18/245 (7%)
Query: 2 SYRANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFA 61
+ + NG + G N+++K+FVGG+ +++N +F++YGEV +K D G+SRGFA
Sbjct: 15 TIKENGHSTKG-NEDKKIFVGGISPEVNNEDLNSHFTKYGEVAQAQVKYDRTNGRSRGFA 73
Query: 62 FVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYF 121
FV +TT + L+A + I K ++ K R N K+FVGGL ++ +E ++R +F
Sbjct: 74 FVEFTTGEGCKLALSAREQTIKGKSVEVKPAKSRENK---KVFVGGLPSDYSEAELRTHF 130
Query: 122 SQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV----K 177
Q+G + + + PFDK ++ F FI F+++ AD+ KQ +E DVK+ K
Sbjct: 131 EQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQGK 190
Query: 178 FNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYA 237
P G + G G R + +A+ A G++ A P YG T D Y
Sbjct: 191 RFPPGQGRMPGGRGMYGGRGGNNNSAWYAGWGQIGAVP----------YGTTGAWGDWYG 240
Query: 238 TAYPG 242
Y G
Sbjct: 241 NGYYG 245
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 264 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 323
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 324 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 381
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 382 RIMLGTLGVQLPTAPGQLI 400
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 288 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 347
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 348 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 392
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 199 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 258
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 259 KVLKVPIHTLDGKKIDPK 276
>gi|308490851|ref|XP_003107617.1| CRE-MSI-1 protein [Caenorhabditis remanei]
gi|308250486|gb|EFO94438.1| CRE-MSI-1 protein [Caenorhabditis remanei]
Length = 335
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 10/208 (4%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G D K+F+GGL T + + DYF ++GEV + DP T ++RGF F+T+ +V
Sbjct: 36 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 95
Query: 72 DDLLAAGDHYIGNKKID-----PKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
D +L A +H + KKID PKR ++ K+F+GGL+ T +D++ YF YG
Sbjct: 96 DKVLNAREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDLKQYFETYGK 155
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
+ + +DK+ +GF F++FD VAD+V + I GK V+ K+ + P+ V
Sbjct: 156 VEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQ--PK---EV 210
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAY 214
V+ +R ++A Y P ++AY
Sbjct: 211 MLPVQLNKSRAAAARNLYGMPPETLLAY 238
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+F+GGL + +++ YF YG+VE + D T + RGF FVT+ + + D +
Sbjct: 130 KKVFIGGLSATSTLEDLKQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCE 189
Query: 77 AGDHYIGNKKID-----PKRVTKRVNPLKCKIFVG----GLTTEITEQDVRDYFSQYGSI 127
H I K ++ PK V V K + G+ E T Y ++G
Sbjct: 190 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYGMPPE-TLLAYAQYLPRFGGN 248
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ GF F++FD VAD+V + I GK V+ K+ +
Sbjct: 249 LMY-------PGFGNGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQ 291
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 235
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 236 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 295
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 296 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 353
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 354 RIMLGTLGVQLPTAPGQLI 372
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 260 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 319
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 320 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 364
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 171 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 230
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 231 KVLKVPIHTLDGKKIDPK 248
>gi|451993278|gb|EMD85752.1| hypothetical protein COCHEDRAFT_113051, partial [Cochliobolus
heterostrophus C5]
Length = 168
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T E + YFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 1 MFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCV-NIVMVK 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R + KIFVGG++ E TE+D ++F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKE 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD D L+ P Q++ GK+++VKR +
Sbjct: 120 TGRPRGFGFVTFDGDAAVDATLRGPLQIL-GKQIEVKRAQ 158
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 9 AGPGRNDER--KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
A P ER K+FVGG+ + E++ ++F Q+G V ++ D TG+ RGF FVT+
Sbjct: 73 AIPREEQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFD 132
Query: 67 TQKAVDDLLAAGDHYIGNKKIDPKRVTKRVN 97
AVD L +G K+I+ KR R N
Sbjct: 133 GDAAVDATLRGPLQILG-KQIEVKRAQPRGN 162
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 108/200 (54%), Gaps = 6/200 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF +G V + I DP T +SRGF F+T++ +VD++L
Sbjct: 42 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLKV 101
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + +V+ YFSQ+G + E
Sbjct: 102 PIHTLDGKKIDPKHATPKNRPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVML 161
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ S + G
Sbjct: 162 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVQASAQLLGK 219
Query: 194 GARVSSAGAAYAAAPGRVVA 213
+S G A +A
Sbjct: 220 RLMLSGLGMRMATPTAGAIA 239
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 188 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 247
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 248 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 307
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 308 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 365
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 366 RIMLGTLGVQLPTAPGQLI 384
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 272 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 331
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 332 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 376
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 183 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 242
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 243 KVLKVPIHTLDGKKIDPK 260
>gi|226472218|emb|CAX77145.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 307
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 6/166 (3%)
Query: 16 ERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLL 75
++KLF+GGL T E + DY+ Q+GE+ + + DP + +SRGF FVTY +VD
Sbjct: 13 DKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVDAAQ 72
Query: 76 AAGDHYIGNKKIDPKRVTKR------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
H + K++D KR R V+ KIFVG L ++T +D+ DYFSQ+G++T+
Sbjct: 73 NNRPHTVDGKEVDTKRAMPREETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTD 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
Q K N +GF F++FDD + D+V+ I + DV++
Sbjct: 133 AQIVIAKDTNTSRGFAFVTFDDTDAVDKVILARPHTIKDSKADVRK 178
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 108/200 (54%), Gaps = 6/200 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF +G V + I DP T +SRGF F+T++ +VD++L
Sbjct: 57 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLKV 116
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + +V+ YFSQ+G + E
Sbjct: 117 PIHTLDGKKIDPKHATPKNRPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVML 176
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ S + G
Sbjct: 177 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVQASAQLLGK 234
Query: 194 GARVSSAGAAYAAAPGRVVA 213
+S G A +A
Sbjct: 235 RLMLSGLGMRMATPTAGAIA 254
>gi|398396946|ref|XP_003851931.1| hypothetical protein MYCGRDRAFT_28846, partial [Zymoseptoria
tritici IPO323]
gi|339471811|gb|EGP86907.1| hypothetical protein MYCGRDRAFT_28846 [Zymoseptoria tritici IPO323]
Length = 161
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV ++ D +G+SRGF F+T+ K V+ ++
Sbjct: 1 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGQSGRSRGFGFLTFKDPKTVNTVMVK 60
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + K IDPKR R + KIFVGG++ E TEQD +++F Q+G + + DK
Sbjct: 61 -EHSLDGKLIDPKRAIPRDEQERTAKIFVGGVSQEATEQDFKEFFMQFGRVLDATLMMDK 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FDD+ ++ L+ P I GK ++VKR +
Sbjct: 120 DTGRPRGFGFVTFDDEKAVERTLEGP-LAILGKGIEVKRAQ 159
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF+ +G V + I DP T +SRGF F+T+ VD +L
Sbjct: 200 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 259
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + +V+ YFSQ+G + E
Sbjct: 260 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGPVEETVML 319
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 320 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 377
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 378 RIMLGTLGVQLPTAPGQLI 396
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 284 NKTKKIFVGGVSQDTSADEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 343
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 344 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 388
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + + +++YF+ +G++T+ D +GF FI+F + D
Sbjct: 195 DPAPGKLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVD 254
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 255 KVLKVPIHTLDGKKIDPK 272
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + +YFSQ+GEV ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + K IDPKR R + KIFVGG++ E ++ D ++F ++G++ + DK
Sbjct: 60 EHTLDGKLIDPKRAIPRDEQERTAKIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDKE 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + D+ L++P ICGK ++VKR +
Sbjct: 120 TGRPRGFGFVTFDSEAAVDRTLESPL-AICGKNIEVKRAQ 158
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + + + ++F ++G V ++ D TG+ RGF FVT+ ++ AVD L +
Sbjct: 84 KIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDKETGRPRGFGFVTFDSEAAVDRTLES 143
Query: 78 GDHYIGNKKIDPKRVTKR 95
G K I+ KR R
Sbjct: 144 PLAICG-KNIEVKRAQPR 160
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 264 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 323
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 324 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 381
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 382 RIMLGTLGVQLPTAPGQLI 400
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 288 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 347
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 348 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 392
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 199 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 258
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 259 KVLKVPIHTLDGKKIDPK 276
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 264 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 323
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 324 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 381
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 382 RIMLGTLGVQLPTAPGQLI 400
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 288 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 347
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 348 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 392
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 199 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 258
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 259 KVLKVPIHTLDGKKIDPK 276
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 112/222 (50%), Gaps = 26/222 (11%)
Query: 11 PGRNDERK-LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
P +ERK LFVGGL +T ++ + YFSQYGEV I D T QSRGF FV +
Sbjct: 69 PSEQEERKKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPN 128
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTT 110
V +LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 129 CVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPH 188
Query: 111 EITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKE 170
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+
Sbjct: 189 NCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKK 248
Query: 171 VDVKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
V+VKR + P S + GA G+R V SA +A P
Sbjct: 249 VEVKRAE--PRDSKSQAPGQPGASQWGSRVVPSAANGWAGQP 288
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 105/188 (55%), Gaps = 14/188 (7%)
Query: 3 YRANGTAGPGRNDER------------KLFVGGLHRNTGEKEINDYFSQYGEVESISIKN 50
++ G +GPG E+ K+F+GGL+ T E + DYFS+YG+V + I
Sbjct: 182 FQQGGASGPGSAAEQRTNKADLSRDICKMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMR 241
Query: 51 DPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLT 109
D TG+SRGF F+T+ +VD+++ H + K IDPKR R K KIFVGG+
Sbjct: 242 DNATGRSRGFGFLTFAEASSVDEVVKT-QHILDGKVIDPKRAIPREEQDKTGKIFVGGIG 300
Query: 110 TEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGK 169
++ ++ ++FSQ+G+I + Q DK +GF FI++D + D+V +N GK
Sbjct: 301 PDVRPKEFEEFFSQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDRVCENKFIEFKGK 360
Query: 170 EVDVKRVK 177
+++KR +
Sbjct: 361 RIEIKRAE 368
>gi|322694374|gb|EFY86205.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium acridum
CQMa 102]
Length = 516
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D+ K+F+GGL+ T ++ + +YF Q+GEV ++ D TG+SRGF F+T+ K V ++
Sbjct: 106 DDGKMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTV-NI 164
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ +H++ K IDPKR R K KIFVGG++ E T+Q+ RDYF+Q+G + +
Sbjct: 165 VMVKEHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFRDYFAQFGRVVDATLM 224
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++F+ + + + P + I GK V+VKR +
Sbjct: 225 MDKDTGRPRGFGFVTFESEAGVEACINVPLE-IHGKPVEVKRAQ 267
>gi|19111886|ref|NP_595094.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676196|sp|O94432.1|YHKF_SCHPO RecName: Full=Uncharacterized RNA-binding protein C660.15
gi|4049514|emb|CAA22535.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe]
Length = 474
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
P ++ K+F+GGL+ T + + DYF Q+GEV ++ D TG+SRGF F+T+ K
Sbjct: 157 PFNREDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKC 216
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
V+++++ +H++ K IDPKR R K K+FVGG+ + TE++ R++F+Q+G + +
Sbjct: 217 VNEVMSK-EHHLDGKIIDPKRAIPREEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLD 275
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
DK +GF F+++++++ + + P I GK V+VKR
Sbjct: 276 ATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRA 322
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E+E ++F+Q+G V ++ D TG+ RGF FVTY + AV+ ++
Sbjct: 248 KMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQ 307
Query: 78 GDHYIGNKKIDPKRVTKRV 96
I K ++ KR T +
Sbjct: 308 PYITIHGKPVEVKRATPKA 326
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 10/201 (4%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 211 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVEKVLKV 270
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YF+Q+G + E
Sbjct: 271 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFAQFGPVEETVML 330
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ SV+ A +
Sbjct: 331 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKE--SVTPAAQLL 386
Query: 194 GARV--SSAGAAYAAAPGRVV 212
R+ S G +APG+++
Sbjct: 387 QKRIMLGSLGVQLPSAPGQLI 407
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YF+Q+G VE + D T + RGF FVT+ + VD
Sbjct: 295 NKTKKIFVGGVSQDTSAEEVKAYFAQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 354
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 355 VCEIHFHTIKNKKVECKKAQPKESVTPAAQLLQKRIMLGSLGVQL 399
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F D +
Sbjct: 206 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVE 265
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 266 KVLKVPIHTLDGKKIDPK 283
>gi|351702220|gb|EHB05139.1| RNA-binding protein Musashi-like protein 1, partial [Heterocephalus
glaber]
Length = 329
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 121/237 (51%), Gaps = 24/237 (10%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-- 90
+ +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA H + +K IDPK
Sbjct: 3 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 62
Query: 91 ---RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
R ++ KIFVGGL+ T +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 63 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFV 122
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAA 207
+F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG V A+
Sbjct: 123 TFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARGRSRVVPYGMDAFMLG 180
Query: 208 PGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAYPAPAVQTMDTPL 264
G ++ YP G+ A +Y + + Y A GY Y P + TPL
Sbjct: 181 IG-MLGYP-----------GFQATTYASRS-----YTGLAPGYTYQFPEFRVERTPL 220
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 76 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 136 IHFHEINNKMVECKK 150
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 115 QDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ +R+YF Q+G + E D +GF F++F DQ D+VL + + K +D K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
>gi|366992097|ref|XP_003675814.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
gi|342301679|emb|CCC69450.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ T E + +YFS+YG V + I D TG+SRGF F+T+ +VD++
Sbjct: 194 DNCKMFIGGLNWETTEDGLKNYFSKYGNVVELKIMKDGATGRSRGFGFLTFENPSSVDEV 253
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR R K KIFVGG+ T++ ++ D+F+QYG+I + Q
Sbjct: 254 VKT-QHILDGKVIDPKRSIPREEQDKTGKIFVGGIGTDVRPKEFEDFFAQYGTIIDAQLM 312
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F+++D + D+V +N GK++++KR +
Sbjct: 313 LDKDTGRSRGFGFVTYDSGDAVDRVCQNKYIEFKGKQIEIKRAE 356
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 107/186 (57%), Gaps = 7/186 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 120 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTV-NIVMV 178
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H++ K IDPKR R K KIFVGG++ E T+Q+ ++YF+Q+G + + DK
Sbjct: 179 KEHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDK 238
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK----FNPETMGSVSGAVRG 192
+GF F++F+++ D + P + I GK ++VK+ + E S G R
Sbjct: 239 DTGRPRGFGFVTFENEAGVDACINVPLE-IHGKPIEVKKAQPRGNLREEEEASRRGKFRK 297
Query: 193 AGARVS 198
G + S
Sbjct: 298 DGDQSS 303
>gi|303312249|ref|XP_003066136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105798|gb|EER23991.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040133|gb|EFW22067.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coccidioides
posadasii str. Silveira]
Length = 495
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R + KIFVGG++ + EQD + +F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P +++ GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVEACLSQPLEIL-GKPIEVKKAQ 158
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ ++ E++ +F Q+G V ++ D TG+ RGF FVT+ ++ AV+ L+
Sbjct: 84 KIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEACLSQ 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+G K I+ K+ R N
Sbjct: 144 PLEILG-KPIEVKKAQPRGN 162
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 148 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 207
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 208 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 267
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 268 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 325
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 326 RIMLGTLGVQLPTAPGQLI 344
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 232 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 291
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 292 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 336
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 143 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 202
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 203 KVLKVPIHTLDGKKIDPK 220
>gi|326918700|ref|XP_003205626.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Meleagris gallopavo]
Length = 264
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 97/158 (61%), Gaps = 3/158 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL +T +K++ +Y S++GEV +IK DP TG+SRGF FV + +V+ +L
Sbjct: 1 MFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVEKVLELK 60
Query: 79 DHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + K IDPKR K P K K+FVGGL+ + +E+ +++YF +G I + P D
Sbjct: 61 EHKLDGKLIDPKRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDT 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
N ++GFCFI++ D+ ++L++ I + ++K
Sbjct: 120 KTNERRGFCFITYTDEEPVKKLLESRYHQIGSGKCEIK 157
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G+ +K+FVGGL +T E++I +YF +GE+E+I + D T + RGF F+TYT ++ V
Sbjct: 79 GKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPV 138
Query: 72 DDLLAAGDHYIGNKKIDPK 90
LL + H IG+ K + K
Sbjct: 139 KKLLESRYHQIGSGKCEIK 157
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA
Sbjct: 63 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 122
Query: 77 AGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDV 117
+ H + + IDPK T R + P + KIFVGG+ E ++
Sbjct: 123 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 182
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 183 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 242
Query: 178 FNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
P S + GA G+R V +A +A P
Sbjct: 243 --PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 275
>gi|226483447|emb|CAX74024.1| Heterogeneous nuclear ribonucleoprotein 27C [Schistosoma japonicum]
Length = 543
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
P N+ KLFVGGLH++T + YFS++G++E ++ D TG+SRGF +V + ++
Sbjct: 5 PQGNEVGKLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDES 64
Query: 71 VDDLLAAGDHYIGNKKIDPKRVT---KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
VD +L H I K++DPKR K N K+FVGG+ + E +R++FS YG +
Sbjct: 65 VDWVLRQKTHLIDLKEVDPKRCNVNMKGKNRRSLKVFVGGIAFDHDENIIRNFFSSYGRV 124
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
T+ ++K +GF F+ FDD+ V ++K + GK+V++K +K
Sbjct: 125 TDVNLLAGQTKPRHRGFAFVGFDDEEVVRNLIKLHYLNLNGKQVEIKAMK 174
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+FVGGL T ++ YFS++G I E D +GF ++ F + D VL+
Sbjct: 12 KLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDESVDWVLRQ 71
Query: 162 PKQVICGKEVDVKRVKFN 179
+I KEVD KR N
Sbjct: 72 KTHLIDLKEVDPKRCNVN 89
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 175 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 234
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 235 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 294
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 295 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 352
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 353 RIMLGTLGVQLPTAPGQLI 371
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 259 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 318
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 319 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 363
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 170 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 229
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 230 KVLKVPIHTLDGKKIDPK 247
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 205 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 264
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 265 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 324
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 325 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 382
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 383 RIMLGTLGVQLPTAPGQLI 401
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 289 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 348
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 349 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 393
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 200 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 259
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 260 KVLKVPIHTLDGKKIDPK 277
>gi|194741288|ref|XP_001953121.1| GF17369 [Drosophila ananassae]
gi|190626180|gb|EDV41704.1| GF17369 [Drosophila ananassae]
Length = 419
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 121/268 (45%), Gaps = 36/268 (13%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+F+GGL T + + ++F Q+G V + DP T SRGF FVTY +V+++
Sbjct: 48 RKIFIGGLSTQTTVETVREFFRQFGAVADAVVMRDPMTNHSRGFGFVTYVDGNSVENVQR 107
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-----------------CKIFVGGLTTEITEQDVRD 119
AG H I NK ++ KR R LK KIF+GGL E +R+
Sbjct: 108 AGPHSIDNKTVETKRALPRHEFLKPGGGAGNSIGAMTGVKSNKIFLGGLKDCHDESSIRE 167
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFN 179
YFSQ+G IT + DK K+GF F+ F+D ADQ L K I V+VK+
Sbjct: 168 YFSQFGGITSVKLLLDKDTGRKRGFGFLEFEDSASADQALAQGKHTINMTTVEVKKSTQK 227
Query: 180 PETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAY--A 237
P+ G R GAA A G + P++ Y Y++ +Y+ Y
Sbjct: 228 PDP---------GKRLRFPVGGAARA---GYIPPQPASL-----DSYNYSSSTYNPYLAQ 270
Query: 238 TAYPGYDYSAMGYAYPAPAVQTMDTPLV 265
T P + +Y P + P++
Sbjct: 271 TVLPPSAFINGWASYVTPEISPPTNPVL 298
>gi|351699554|gb|EHB02473.1| DAZ-associated protein 1 [Heterocephalus glaber]
Length = 404
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA
Sbjct: 7 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 66
Query: 77 AGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDV 117
+ H + + IDPK T R + P + KIFVGG+ E ++
Sbjct: 67 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 126
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 127 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 186
Query: 178 FNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
P S + GA G+R V SA +A P
Sbjct: 187 --PRDSKSQAPGQPGASQWGSRVVPSAANGWAGQP 219
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 207 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 266
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 267 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 326
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 327 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 384
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 385 RIMLGTLGVQLPTAPGQLI 403
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 291 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 350
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 351 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 395
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 202 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 261
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 262 KVLKVPIHTLDGKKIDPK 279
>gi|427777643|gb|JAA54273.1| Putative heteroproteinous nuclear ribonucleoprotein at 87f
[Rhipicephalus pulchellus]
Length = 309
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +F Q+GEV + DP T +SRGF F+T+ VDD A
Sbjct: 14 RKLFIGGLDYKTTEESLKGHFEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHMVDDAQA 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + ++++PKR R + K+FVGGL ++ E D+RDYFSQ+G+I
Sbjct: 74 ARPHKVDGREVEPKRAVPREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFSQFGNILS 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+K K+GF F+ +DD + D+++ ++ GK +VK+
Sbjct: 134 VNLVTEKDTGRKRGFAFVEYDDYDPVDKIVLKRHHMLKGKRTEVKK 179
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V+ +L
Sbjct: 137 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 196
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 197 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 256
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
D+ +GF F++F++++V D+V + I K+V+ K+ + P+ + + +
Sbjct: 257 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ--PKEAVTPAAQLLQK 314
Query: 194 GARVSSAGAAYAAAPGRVV 212
+ + G APG+++
Sbjct: 315 RIMLGTLGVQLPTAPGQLI 333
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 221 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 280
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 281 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 325
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F + +
Sbjct: 132 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVE 191
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 192 KVLKVPIHTLDGKKIDPK 209
>gi|387016398|gb|AFJ50318.1| HNRPA1 protein [Crotalus adamanteus]
Length = 212
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + ++F Q+G + + DP T +SRGF FVTY+T + VD +
Sbjct: 27 RKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 86
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 87 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 146
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S +
Sbjct: 147 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASSS 205
Query: 190 VRG 192
RG
Sbjct: 206 QRG 208
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ T E+ + DYFS+YG V + I D TG+SRGF F+T+ +VD++
Sbjct: 184 DINKMFIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTFENASSVDEV 243
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+GSI + Q
Sbjct: 244 VKT-QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLM 302
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF FI++D + D+V +N GK++++KR +
Sbjct: 303 LDKDTGRSRGFGFITYDTPDAVDRVCQNKFIEFKGKQIEIKRAE 346
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 88 DPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
+PK + ++ K+F+GGL E TE+ +RDYFS+YG++ E + D + +GF F+
Sbjct: 173 EPKAIKADLSRDINKMFIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFL 232
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVKRV 176
+F++ + D+V+K + ++ GK +D KR
Sbjct: 233 TFENASSVDEVVKT-QHILDGKVIDPKRA 260
>gi|508268|gb|AAA64653.1| A+U-rich RNA-binding protein, partial [Mus musculus]
Length = 177
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A DE K+F+GGL +T +K++ DYFS++GEV ++K DP TG+SRGF FV +
Sbjct: 38 ASKNEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKES 97
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
++VD ++ +H + K IDPKR K P+K KIFVGGL+ + E+ +R+YF +G
Sbjct: 98 ESVDKVMDQKEHKLNGKVIDPKRAKAMKTKEPVK-KIFVGGLSPDTPEEKIREYFGGFGE 156
Query: 127 ITEFQQPFDKSKNMKKGFCF 146
+ + P D N ++GFC
Sbjct: 157 VESIELPMDNKTNKRRGFCI 176
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+F+GGL+ + T++D++DYFS++G + + D +GF F+ F + D+V+
Sbjct: 47 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 106
Query: 162 PKQVICGKEVDVKRVK 177
+ + GK +D KR K
Sbjct: 107 KEHKLNGKVIDPKRAK 122
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 99/161 (61%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYF+Q+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 48 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTV-NIVMV 106
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H++ K IDPKR R K KIFVGG++ E T+Q+ +DYF+Q+G + + DK
Sbjct: 107 KEHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDK 166
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+ + D LK + I GK ++VK+ +
Sbjct: 167 DTGRPRGFGFVTFESEEGVDACLKTHLE-IHGKPIEVKKAQ 206
>gi|426247780|ref|XP_004017654.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Ovis aries]
Length = 325
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 124/246 (50%), Gaps = 24/246 (9%)
Query: 24 LHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIG 83
L G + + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA H +
Sbjct: 17 LDLGEGGEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELD 76
Query: 84 NKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSK 138
+K IDPK R ++ KIFVGGL+ T +DV+ YF Q+G + + FDK+
Sbjct: 77 SKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTT 136
Query: 139 NMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVS 198
N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG +
Sbjct: 137 NRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARGRSRVMP 194
Query: 199 SAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAYPAPAVQ 258
A+ G ++ YP G+ A +Y + + Y A GY Y P +
Sbjct: 195 YGMDAFMLGIG-MLGYP-----------GFQATTYASRS-----YTGLAPGYTYQFPEFR 237
Query: 259 TMDTPL 264
TPL
Sbjct: 238 VERTPL 243
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 99 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 158
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 159 IHFHEINNKMVECKK 173
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 11/180 (6%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
G N++ K+F+GGL T + YFSQYGEV + +P TG+SRGF F+T+
Sbjct: 12 GGDNSNEQGKMFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFADP 71
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKC-----------KIFVGGLTTEITEQDV 117
V +L H + N+ IDPK R ++ K+F+GGL + +TE D+
Sbjct: 72 NNVGLVLQNTPHILDNRTIDPKPCNPRAEMVRAPRRSMGTGNGYKVFLGGLPSNLTETDL 131
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
R++FSQYG ++E +D+ K +GF F++F+ + D+ I GK+V++K+ +
Sbjct: 132 RNFFSQYGKVSEVVIMYDQEKKKSRGFGFLTFESEESVDRCTGEHYVSINGKQVEIKKAE 191
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Acyrthosiphon pisum]
Length = 442
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 99/171 (57%), Gaps = 6/171 (3%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+++ KLFVGGL T ++ + YF++YGEV + + +G+SRGF FVT+ V+
Sbjct: 9 EDEQGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVN 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +FS+YG
Sbjct: 69 VVLQNGPHVLDGRTIDPKPCNPRTLQKPKRSSSYPKVFLGGLPSNVTETDLRTFFSRYGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E +D+ K +GF F+SF+D + D+ + + GK+V++K+ +
Sbjct: 129 VMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAE 179
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 98/174 (56%), Gaps = 17/174 (9%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G D K+FVGGL T + + +YF++YGE++ + DP T +SRGF FVTY +V
Sbjct: 18 GHQDPGKMFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYADPGSV 77
Query: 72 DDLLAAGDHYIGNKKIDPK----------RVTKRVNPLKCKIFVGGLTTEITEQDVRDYF 121
D +LA G H + K IDPK + K V K KIFVGGL+ T +DV+ YF
Sbjct: 78 DKVLANGPHELDTKLIDPKLAFPRRPNATQQPKMVTRTK-KIFVGGLSASTTLEDVKQYF 136
Query: 122 SQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGK 169
SQ+G I + FDK+ +GF F++F+ ++V D+V + N K V C K
Sbjct: 137 SQFGKIEDAMLMFDKATQRHRGFAFVTFECEDVVDKVCEIHFHEINNKMVECKK 190
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 96/182 (52%), Gaps = 19/182 (10%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
+ RKLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +
Sbjct: 91 EARKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 150
Query: 75 LAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQ 115
LA+ H + + IDPK T R + P + KIFVGG+ E
Sbjct: 151 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGET 210
Query: 116 DVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR
Sbjct: 211 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 270
Query: 176 VK 177
+
Sbjct: 271 AE 272
>gi|332850902|ref|XP_001147948.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Pan troglodytes]
Length = 432
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA
Sbjct: 35 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 94
Query: 77 AGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDV 117
+ H + + IDPK T R + P + KIFVGG+ E ++
Sbjct: 95 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 154
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 155 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 214
Query: 178 FNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
P S + GA G+R V +A +A P
Sbjct: 215 --PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 247
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Acyrthosiphon pisum]
Length = 432
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 99/171 (57%), Gaps = 6/171 (3%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+++ KLFVGGL T ++ + YF++YGEV + + +G+SRGF FVT+ V+
Sbjct: 9 EDEQGKLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVN 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +FS+YG
Sbjct: 69 VVLQNGPHVLDGRTIDPKPCNPRTLQKPKRSSSYPKVFLGGLPSNVTETDLRTFFSRYGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E +D+ K +GF F+SF+D + D+ + + GK+V++K+ +
Sbjct: 129 VMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQVEIKKAE 179
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 99/164 (60%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ T E+ + DYF++YG+V + I D TG+SRGF F+T+ +VD++
Sbjct: 154 DSCKMFIGGLNWETTEETLRDYFNKYGKVVELKIMKDNNTGRSRGFGFLTFEDATSVDEV 213
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR R K KIFVGG+ ++ ++ D+F+QYG+I + Q
Sbjct: 214 VKT-QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGADVRPKEFEDFFAQYGTIIDAQLM 272
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F+++D + D+V +N GK++++KR +
Sbjct: 273 LDKDTGRSRGFGFVTYDSPDAVDRVCQNKFIEFKGKQIEIKRAE 316
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 110/223 (49%), Gaps = 25/223 (11%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A P R KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV +
Sbjct: 31 APPVRAQTWKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDP 90
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLT 109
V +LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 91 NCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRNDNSKSNKIFVGGIP 150
Query: 110 TEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGK 169
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK
Sbjct: 151 HNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGK 210
Query: 170 EVDVKRVKFNPETMGSVSGAVRGA---GARV-SSAGAAYAAAP 208
+V+VKR + P S GA G+RV SA +A P
Sbjct: 211 KVEVKRAE--PRDSKSQVPGQPGASQWGSRVMPSAANGWAGQP 251
>gi|417409403|gb|JAA51208.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 292
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+FVGGL +T + ++ DYFS++GEV +IK DP TG+SRGF F+ + +V+
Sbjct: 27 DDAGKMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 86
Query: 74 LLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+L +H + + IDPK+ + + P+K KIFVGGL E TE+++R+YF ++G I
Sbjct: 87 VLDQKEHRLDGRVIDPKKAMAMKKEPVK-KIFVGGLNPEATEEEIREYFGEFGEIEAIDL 145
Query: 133 PFDKSKNMKKGFCFISFDDQ 152
P D + ++GF FI+F ++
Sbjct: 146 PMDPKSHKRRGFVFITFKEE 165
>gi|345564567|gb|EGX47528.1| hypothetical protein AOL_s00083g337 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 101/164 (61%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
++ K+F+GGL+ T ++ + DYFSQ+GEV ++ D +G+SRGF F+T+ K V ++
Sbjct: 156 EDGKMFIGGLNWETTDESLRDYFSQFGEVSECTVMRDGPSGRSRGFGFLTFKDPKTV-NI 214
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ +HY+ K IDPKR R + KIFVGG++ E +E++ +++F Q+G + +
Sbjct: 215 VMVKEHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEASEEEFKNFFMQFGRVIDSTLM 274
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++FD++ D L++P I K ++VK+ +
Sbjct: 275 IDKETGRPRGFGFVTFDNEAAVDLALQHPDLRIRDKPIEVKKAQ 318
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E+E ++F Q+G V ++ D TG+ RGF FVT+ + AVD L
Sbjct: 243 KIFVGGVSQEASEEEFKNFFMQFGRVIDSTLMIDKETGRPRGFGFVTFDNEAAVDLALQH 302
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
D I +K I+ K+ R N
Sbjct: 303 PDLRIRDKPIEVKKAQPRGN 322
>gi|385303294|gb|EIF47378.1| subunit of cleavage factor i, partial [Dekkera bruxellensis
AWRI1499]
Length = 298
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL T E+ + YF Q+GEV + I D TG+SRGFAF+T+ K+VD++L
Sbjct: 1 MFIGGLTWETDEESLGKYFGQFGEVTELHIMRDTATGRSRGFAFLTFKDSKSVDEVLKQ- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
H + K IDPKR R K KIFVGG+ ++T Q+ DYF Q+G I + Q DK
Sbjct: 60 KHVLDGKLIDPKRAIPREEQDKTGKIFVGGIAPDVTHQEFTDYFKQFGDIIDSQLMLDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+G+ F+++D + +V +N + G+++++K+ +
Sbjct: 120 TGKSRGYGFVTYDSADAVARVTRNKYVMFHGRQMEIKKAE 159
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
K+FVGG+ + +E DYF Q+G++ + D TG+SRG+ FVTY + AV
Sbjct: 84 KIFVGGIAPDVTHQEFTDYFKQFGDIIDSQLMLDKDTGKSRGYGFVTYDSADAV 137
>gi|281340836|gb|EFB16420.1| hypothetical protein PANDA_020894 [Ailuropoda melanoleuca]
Length = 329
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 121/237 (51%), Gaps = 24/237 (10%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-- 90
+ +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA H + +K IDPK
Sbjct: 3 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 62
Query: 91 ---RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
R ++ KIFVGGL+ T +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 63 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFV 122
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAA 207
+F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG + A+
Sbjct: 123 TFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARGRSRVMPYGMDAFMLG 180
Query: 208 PGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAYPAPAVQTMDTPL 264
G ++ YP G+ A +Y + + Y A GY Y P + TPL
Sbjct: 181 IG-MLGYP-----------GFQATTYASRS-----YTGLAPGYTYQFPEFRVERTPL 220
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 76 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 136 IHFHEINNKMVECKK 150
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 115 QDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ +R+YF Q+G + E D +GF F++F DQ D+VL + + K +D K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V
Sbjct: 97 GSKEDGKMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTV 156
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+ ++ +H + K IDPKR R + KIFVGG++ + TEQD +F ++G + +
Sbjct: 157 NTVMVK-EHSLDGKLIDPKRAIPRDEQERTAKIFVGGVSQDATEQDFEAFFQKFGRVLDA 215
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++FD++ ++ L+ P I GK ++VKR +
Sbjct: 216 TLMMDKDTGRPRGFGFVTFDNEMAVERTLEGPL-AILGKPIEVKRAQ 261
>gi|354497473|ref|XP_003510844.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cricetulus
griseus]
Length = 510
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 127/260 (48%), Gaps = 33/260 (12%)
Query: 16 ERKLFVGGLHRNTG---EKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
E+ F G H +G + + +YF Q+GEV+ + DP T +SRGF FVT+ Q VD
Sbjct: 164 EQGGFPEGGHHQSGCVVTEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 223
Query: 73 DLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSI 127
+LA H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+G +
Sbjct: 224 KVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 283
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVS 187
+ FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +
Sbjct: 284 DDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPT 341
Query: 188 GAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAY-ATAYPGYDYS 246
G+ RG RV+ Y G A G Y + AT Y Y+
Sbjct: 342 GSARGR---------------SRVMPY-----GMDAFMLGIGMLGYPGFQATTYASRSYT 381
Query: 247 AM--GYAYPAPAVQTMDTPL 264
+ GY Y P + TPL
Sbjct: 382 GLAPGYTYQFPEFRVERTPL 401
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 2/167 (1%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
P ++ K+F+GGL+ T ++ + DYF Q+GEV ++ D TG+SRGF F+T+ K
Sbjct: 114 PFNREDGKMFIGGLNWETTDESLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKDPKC 173
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
V ++ + +H++ K IDPKR R K K+FVGG+ + TE++ RD+F+Q+G + +
Sbjct: 174 V-QVVMSKEHHLDGKIIDPKRAIPREEQEKTAKMFVGGVPADCTEEEFRDFFNQFGRVLD 232
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
DK +GF F++F+++ + + P I GK V+VKR
Sbjct: 233 ATLMMDKDTGRPRGFGFVTFENEAAVENTMSQPYITIHGKPVEVKRA 279
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E+E D+F+Q+G V ++ D TG+ RGF FVT+ + AV++ ++
Sbjct: 205 KMFVGGVPADCTEEEFRDFFNQFGRVLDATLMMDKDTGRPRGFGFVTFENEAAVENTMSQ 264
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
I K ++ KR T + +
Sbjct: 265 PYITIHGKPVEVKRATPKAS 284
>gi|443725988|gb|ELU13330.1| hypothetical protein CAPTEDRAFT_219071 [Capitella teleta]
Length = 453
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 121/237 (51%), Gaps = 18/237 (7%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DE+ K+FVGGL +T + YFS+YGEV + +P TG+SRGF FVT+ V
Sbjct: 5 DEKGKIFVGGLSWDTTHATMLKYFSRYGEVIDCVVMKNPQTGKSRGFGFVTFKDPSCVKT 64
Query: 74 LLAAGDHYIGNKKIDPKRVTKR--------VNPLKCKIFVGGLTTEITEQDVRDYFSQYG 125
+LA H + +++IDPK+ R K K+F+GGL + ITE +++++F+++G
Sbjct: 65 VLANQPHVLDSRQIDPKQCNPRSMNKGGKSAENSKRKVFMGGLPSNITEDEIKEHFAEFG 124
Query: 126 SITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGS 185
+ + D+ K +GF F++FD + ++V+ + GK+V+ KR + P M
Sbjct: 125 EVQDVVIMVDQDKERSRGFGFLTFDCEESVEKVISQHYVPVKGKQVECKRAQ--PREMKL 182
Query: 186 VSGAVRGAGARVSSAGAAYAAAPGRVVAYP-STYAGYAAADYGYTAGSYDAYATAYP 241
++ + + PG A+P S+ G AA Y A+ AYP
Sbjct: 183 MADCAALPSGFSAGGACSMGLIPGTPYAFPASSLPGAMAAGY------PGAFTQAYP 233
>gi|322711386|gb|EFZ02959.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium
anisopliae ARSEF 23]
Length = 517
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + +YF Q+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 113 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTV-NIVMV 171
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H++ K IDPKR R K KIFVGG++ E T+Q+ RDYF+Q+G + + DK
Sbjct: 172 KEHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFRDYFAQFGRVVDATLMMDK 231
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+ + + + P + I GK V+VKR +
Sbjct: 232 DTGRPRGFGFVTFESEAGVEACINVPLE-IHGKPVEVKRAQ 271
>gi|302509632|ref|XP_003016776.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
gi|291180346|gb|EFE36131.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
Length = 489
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + +YFSQ+GEV ++ D +G+SRGF F+T+T K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R + KIFVGG++ E TEQ+ + +F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P + I GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVEATLSVPLE-IHGKAIEVKKAQ 158
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E+E +F Q+G V ++ D TG+ RGF FVT+ ++ AV+ L+
Sbjct: 84 KIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSV 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
I K I+ K+ R N
Sbjct: 144 -PLEIHGKAIEVKKAQPRGN 162
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 11/213 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
D K+F+GGL T + + +YF++YGE+ + DP T +SRGF FVT++ +VD
Sbjct: 21 QDPGKMFIGGLSWQTTPEGLREYFAKYGEISECMVMRDPITKRSRGFGFVTFSDPASVDK 80
Query: 74 LLAAGDHYIGNKKIDPK----RVTKRVNPLKC-----KIFVGGLTTEITEQDVRDYFSQY 124
+LA G H + +K IDPK R N K KIFVGGL+ T DV+ YF Q+
Sbjct: 81 VLANGPHELDSKVIDPKVAFPRRPNTANQPKLVTKTKKIFVGGLSASTTVDDVKQYFEQF 140
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM- 183
G I + FDK+ +GF F++F++++V D+V + I K V+ K+ + M
Sbjct: 141 GKIEDAMLMFDKATQRHRGFAFVTFENEDVVDKVCEIHFHEINNKMVECKKAQPKEVMMP 200
Query: 184 -GSVSGAVRGAGARVSSAGAAYAAAPGRVVAYP 215
GSV + AG Y + G YP
Sbjct: 201 QGSVDDDLSFTLPGFLPAGFPYVYSGGSRSTYP 233
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 109/215 (50%), Gaps = 25/215 (11%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA
Sbjct: 48 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 107
Query: 77 AGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDV 117
+ H + + IDPK T R + P + KIFVGG+ E ++
Sbjct: 108 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 167
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 168 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 227
Query: 178 FNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
P S + GA G+R V +A +A P
Sbjct: 228 --PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 260
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 97/161 (60%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T E + DYFS+YG V + I D TG+SRGF F+T+ + +VD+++
Sbjct: 160 KMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSVDEVVKT 219
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++F+Q+G+I + Q DK
Sbjct: 220 -QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDK 278
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N GK++++KR +
Sbjct: 279 DTGRSRGFGFVTYDSPDAVDRVCQNKFIDFKGKKIEIKRAE 319
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL E TE +RDYFS+YG + + + D + +GF F++FD + D+V+K
Sbjct: 159 CKMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSVDEVVK 218
Query: 161 NPKQVICGKEVDVKRV 176
+ ++ GK +D KR
Sbjct: 219 T-QHILDGKVIDPKRA 233
>gi|301790887|ref|XP_002930448.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Ailuropoda
melanoleuca]
Length = 360
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 121/237 (51%), Gaps = 24/237 (10%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-R 91
+ +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA H + +K IDPK
Sbjct: 34 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 93
Query: 92 VTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
+R P KIFVGGL+ T +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 94 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFV 153
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAA 207
+F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG + A+
Sbjct: 154 TFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARGRSRVMPYGMDAFMLG 211
Query: 208 PGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAYPAPAVQTMDTPL 264
G ++ YP G+ A +Y + + Y A GY Y P + TPL
Sbjct: 212 IG-MLGYP-----------GFQATTYASRS-----YTGLAPGYTYQFPEFRVERTPL 251
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 107 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 166
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 167 IHFHEINNKMVECKK 181
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 115 QDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ +R+YF Q+G + E D +GF F++F DQ D+VL + + K +D K
Sbjct: 32 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 91
>gi|148687912|gb|EDL19859.1| Musashi homolog 1(Drosophila) [Mus musculus]
Length = 280
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 28/279 (10%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-- 90
+ +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA H + +K IDPK
Sbjct: 3 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 62
Query: 91 ---RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
R ++ KIFVGGL+ T +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 63 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFV 122
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAA 207
+F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG + A+
Sbjct: 123 TFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARGRSRVMPYGMDAFMLG 180
Query: 208 PGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDYSAMGYAY---PAPAVQTMD--- 261
G ++ YP G+ A Y + SY A PGY Y + P P+ +
Sbjct: 181 IG-MLGYP----GFQATTYA--SRSYTGLA---PGYTYQFPEFRVERSPLPSAPVLPELT 230
Query: 262 -TPLVVMMHMLQHTLVMTIVQWV----THTLHQLLHMEE 295
PL M +V+ H+LHQ + +++
Sbjct: 231 AIPLTAYGPMAAAAAAAAVVRGTGSLDCHSLHQWVPLKQ 269
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 76 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 136 IHFHEINNKMVECKK 150
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 115 QDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ +R+YF Q+G + E D +GF F++F DQ D+VL + + K +D K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+F+GGL+ T ++ + +YFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 225 KKMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVV-NIVM 283
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+HY+ K IDPKR R K KIFVGG++ E T+ + R+YFSQ+G + + D
Sbjct: 284 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSPETTDHEFREYFSQFGRVVDATLMMD 343
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
K +GF F++F+ + + L N K + GK ++VK+ +
Sbjct: 344 KDTGRPRGFGFVTFESEAGVEACL-NAKLELHGKPIEVKKAQ 384
>gi|405957004|gb|EKC23243.1| Heterogeneous nuclear ribonucleoprotein A/B [Crassostrea gigas]
Length = 475
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D+RK+FVG L T +K++ DYF+++GEVE+ +K D T +SRGF FV + VD
Sbjct: 55 DDDRKIFVGNLSWETSQKDLKDYFTKFGEVENCVLKQDLETKRSRGFGFVVFKDPSTVDK 114
Query: 74 LLAAGDHYIGNKKIDPKRVT-KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+L H +G + IDPK+ ++ + KIFVG + +TE ++++YF +G + +
Sbjct: 115 VLDEKTHNLGGRNIDPKKANPRKKEEVIKKIFVGKVDPSLTEAEIKEYFETFGEVKKIDL 174
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQV 158
P+DK+K ++ FCF+ F +++ ++
Sbjct: 175 PYDKTKEQRRAFCFVEFKEEDAVKKI 200
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
KIFVG L+ E +++D++DYF+++G + D +GF F+ F D + D+VL
Sbjct: 59 KIFVGNLSWETSQKDLKDYFTKFGEVENCVLKQDLETKRSRGFGFVVFKDPSTVDKVLDE 118
Query: 162 PKQVICGKEVDVKRVKFNPETMGSVSGAV 190
+ G+ +D K+ NP V +
Sbjct: 119 KTHNLGGRNIDPKKA--NPRKKEEVIKKI 145
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 9 AGPGRNDE--RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
A P + +E +K+FVG + + E EI +YF +GEV+ I + D Q R F FV +
Sbjct: 133 ANPRKKEEVIKKIFVGKVDPSLTEAEIKEYFETFGEVKKIDLPYDKTKEQRRAFCFVEFK 192
Query: 67 TQKAVDDLLAAGDHYIGNKK 86
+ AV + H I +++
Sbjct: 193 EEDAVKKITDQAVHKIKDQE 212
>gi|444516997|gb|ELV11328.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 415
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 105/191 (54%), Gaps = 9/191 (4%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
++D K+F+GGL R+T ++ + Y SQ+GE+ +IK DP TG SRGF FV + AV+
Sbjct: 29 QDDASKMFIGGLSRDTSKEMLIQYLSQFGEILDFTIKMDPDTGLSRGFGFVLFKDSAAVE 88
Query: 73 DLLAAGDHYIGNKKIDPKR---VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
L +H + KKI+ KR + R P K+FVGGL ++E+ +R+YF +G I+
Sbjct: 89 RALRVKEHKLEGKKIELKRAKALEIRFPPR--KVFVGGLNPRMSEEKIREYFGTFGEISN 146
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVI----CGKEVDVKRVKFNPETMGS 185
+ P N+++ FCFI++ D+ ++L+ +I C ++ + + + P+ G
Sbjct: 147 IELPVSPGTNVRRAFCFITYTDERPVRKLLETRYHLIGSGRCEIKIALPKESWRPQRRGG 206
Query: 186 VSGAVRGAGAR 196
G G R
Sbjct: 207 RDVPFIGPGNR 217
>gi|332017443|gb|EGI58166.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Acromyrmex echinatior]
Length = 407
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F Q+GE+ + + DP T +SRGF F+TY+ VDD
Sbjct: 48 RKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 107
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K+FVGGL + E+D+R YF YGSI
Sbjct: 108 ARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINS 167
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D++ I GK VDVK+
Sbjct: 168 ISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKK 213
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 121 bits (303), Expect = 6e-25, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 729 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 788
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKC-------KIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 789 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 848
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 849 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 894
>gi|350592544|ref|XP_003359176.2| PREDICTED: RNA-binding protein Musashi homolog 1-like, partial [Sus
scrofa]
Length = 411
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 124/255 (48%), Gaps = 30/255 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLF + G + + +YF Q+GE + + DP T +SRGF FVT+ Q VD +LA
Sbjct: 70 KLFPVRPSASWGPQGLREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 129
Query: 78 GDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + +K IDPK +R P KIFVGGL+ T +DV+ YF Q+G + +
Sbjct: 130 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 189
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRG 192
FDK+ N +GF F++F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG
Sbjct: 190 MFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARG 247
Query: 193 AGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAY-ATAYPGYDYSAM--G 249
RV+ Y G A G Y + AT Y Y+ + G
Sbjct: 248 R---------------SRVMPY-----GMDAFMLGIGMLGYPGFQATTYASRSYTGLAPG 287
Query: 250 YAYPAPAVQTMDTPL 264
Y Y P + TPL
Sbjct: 288 YTYQFPEFRVERTPL 302
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 158 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 217
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 218 IHFHEINNKMVECKK 232
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 99 LKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQV 158
L+ K+F + Q +R+YF Q+G E D +GF F++F DQ D+V
Sbjct: 67 LRLKLFPVRPSASWGPQGLREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 126
Query: 159 LKNPKQVICGKEVDVK 174
L + + K +D K
Sbjct: 127 LAQSRHELDSKTIDPK 142
>gi|344249205|gb|EGW05309.1| RNA-binding protein Musashi-like 1 [Cricetulus griseus]
Length = 338
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 115/218 (52%), Gaps = 17/218 (7%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-- 90
+ +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA H + +K IDPK
Sbjct: 3 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 62
Query: 91 ---RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
R ++ KIFVGGL+ T +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 63 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFV 122
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAA 207
+F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG + A+
Sbjct: 123 TFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARGRSRVMPYGMDAFMLG 180
Query: 208 PGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
G ++ YP G+ A Y + +Y PGY Y
Sbjct: 181 IG-MLGYP----GFQATTY-----ASRSYTGLAPGYTY 208
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 76 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 135
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 136 IHFHEINNKMVECKK 150
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 115 QDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ +R+YF Q+G + E D +GF F++F DQ D+VL + + K +D K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 100/161 (62%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYF+Q+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 121 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTV-NIVMV 179
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H++ K IDPKR R K KIFVGG++ E T+Q+ ++YF+Q+G + + DK
Sbjct: 180 KEHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDK 239
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+++ D + P + I GK ++VK+ +
Sbjct: 240 DTGRPRGFGFVTFENEAGVDACINVPLE-IHGKPIEVKKAQ 279
>gi|417409049|gb|JAA51051.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 252
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D K+FVGGL +T + ++ DYFS++GEV +IK DP TG+SRGF F+ + +V+
Sbjct: 34 DDAGKMFVGGLSWDTSKNDLKDYFSKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEK 93
Query: 74 LLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+L +H + + IDPK+ + + P+K KIFVGGL E TE+++R+YF ++G I
Sbjct: 94 VLDQKEHRLDGRVIDPKKAMAMKKEPVK-KIFVGGLNPEATEEEIREYFGEFGEIEAIDL 152
Query: 133 PFDKSKNMKKGFCFISFDDQ 152
P D + ++GF FI+F ++
Sbjct: 153 PMDPKSHKRRGFVFITFKEE 172
>gi|367038869|ref|XP_003649815.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
gi|346997076|gb|AEO63479.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
Length = 606
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 101/169 (59%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
GP ++ K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K
Sbjct: 115 GPNAKEDGKMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPK 174
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V +++ +HY+ K IDPKR R K KIFVGG++ E T+ + R+YF+Q+G +
Sbjct: 175 TV-NIVMVKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVV 233
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++F+ + + L K I GK ++VK+ +
Sbjct: 234 DATLMMDKDTGRPRGFGFVTFESEAGVEACLA-AKLEIHGKPIEVKKAQ 281
>gi|195451838|ref|XP_002073097.1| GK13335 [Drosophila willistoni]
gi|194169182|gb|EDW84083.1| GK13335 [Drosophila willistoni]
Length = 415
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 98/181 (54%), Gaps = 12/181 (6%)
Query: 7 GTAGPGRNDE--RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
G A +DE RK+F+GGL T + + YF Q+GE+ + DP + SRGFAFVT
Sbjct: 30 GIASAFESDEHLRKIFIGGLSTQTTVETLRQYFRQFGEMVDAVVMRDPVSNHSRGFAFVT 89
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRV----------NPLKCKIFVGGLTTEITE 114
Y + ++V+++ A H I NK ++ KR R+ N KIF+GGL +E
Sbjct: 90 YLSPESVENVQRARPHTIDNKDVETKRALPRMEFTRSSAGQSNIRSAKIFLGGLRDCHSE 149
Query: 115 QDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ +R+YFSQ+G +T + DK K+GF F+ F D AD+ L K I V+VK
Sbjct: 150 ESIREYFSQFGIVTSVKLLLDKETGRKRGFGFLEFKDLASADRALVQSKHSINYSLVEVK 209
Query: 175 R 175
+
Sbjct: 210 K 210
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
KIF+GGL+T+ T + +R YF Q+G + + D N +GF F+++ + V +
Sbjct: 43 KIFIGGLSTQTTVETLRQYFRQFGEMVDAVVMRDPVSNHSRGFAFVTYLSPESVENVQRA 102
Query: 162 PKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAG 201
I K+V+ KR E S +G A++ G
Sbjct: 103 RPHTIDNKDVETKRALPRMEFTRSSAGQSNIRSAKIFLGG 142
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 109/214 (50%), Gaps = 25/214 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + +YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 31 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 90
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDVR 118
H + + IDPK T R + P + KIFVGG+ E ++R
Sbjct: 91 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELR 150
Query: 119 DYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKF 178
+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 151 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE- 209
Query: 179 NPETMGSVSGAVRGA---GARV-SSAGAAYAAAP 208
P S + GA G+R+ SA +A P
Sbjct: 210 -PRDSKSQTPGPPGASQWGSRIMPSAANGWAGQP 242
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N K+FVGG+ N GE E+ +YF ++G V + + D + RGF F+T+ +++VD
Sbjct: 130 NKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 189
Query: 74 LLAAGDHYIGNKKIDPKRVTKR 95
+ H I KK++ KR R
Sbjct: 190 AVNMHFHDIMGKKVEVKRAEPR 211
>gi|444721584|gb|ELW62314.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 301
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 100/168 (59%), Gaps = 3/168 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A + D+ KLF+GGL +T +K++ +Y S++GEV +IK D TG+SRGF FV +
Sbjct: 21 ASKNQQDDGKLFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDTVTGRSRGFGFVLFKDA 80
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+VD +L +H + K I P+R K P K K+FVGGL+ + +E+ +++YF +G
Sbjct: 81 ASVDKVLELKEHKLDGKLIGPQRAKALKGKEPPK-KVFVGGLSPDTSEEQIKEYFGAFGE 139
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D N ++GFCFI++ D+ ++L++ I + +VK
Sbjct: 140 IENIELPMDTKTNERRGFCFITYTDEEPVKKLLESRCHQIGSGKCEVK 187
>gi|432104101|gb|ELK30931.1| Heterogeneous nuclear ribonucleoprotein A/B [Myotis davidii]
Length = 308
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 102/166 (61%), Gaps = 3/166 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVG L +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 MFVGHLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 79 DHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + + IDPK+ + + P+K KIFVGGL E TE+ +R+YF ++G I P D
Sbjct: 61 EHKLDGRVIDPKKAMAMKKEPVK-KIFVGGLNPEATEEKIREYFGEFGEIEAIDLPMDPK 119
Query: 138 KNMKKGFCFISF-DDQNVADQVLKNPKQVICGKEVDVKRVKFNPET 182
N ++GF FI+F +++ +VL+ I G +++ + +P++
Sbjct: 120 SNKRRGFVFITFKEEEEPVKKVLEKKFHTISGSKIEAIDLPMDPKS 165
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 42/160 (26%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA-VDDLL 75
+K+FVGGL+ E++I +YF ++GE+E+I + DP + + RGF F+T+ ++ V +L
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGEFGEIEAIDLPMDPKSNKRRGFVFITFKEEEEPVKKVL 142
Query: 76 AAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
H I KI+ P D
Sbjct: 143 EKKFHTISGSKIEA----------------------------------------IDLPMD 162
Query: 136 KSKNMKKGFCFISF-DDQNVADQVLKNPKQVICGKEVDVK 174
N ++GF FI+F +++ +VL+ I G + ++K
Sbjct: 163 PKSNKRRGFVFITFKEEEEPVKKVLEKKFHTISGSKCEIK 202
>gi|327303046|ref|XP_003236215.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
gi|326461557|gb|EGD87010.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
Length = 489
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + +YFSQ+GEV ++ D +G+SRGF F+T+T K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R + KIFVGG++ E TEQ+ + +F Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++FD + + L P + I GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFDSEAAVEATLSVPLE-IHGKAIEVKKAQ 158
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E+E +F Q+G V ++ D TG+ RGF FVT+ ++ AV+ L+
Sbjct: 84 KIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSV 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
I K I+ K+ R N
Sbjct: 144 -PLEIHGKAIEVKKAQPRGN 162
>gi|194212385|ref|XP_001498686.2| PREDICTED: DAZ-associated protein 1-like [Equus caballus]
Length = 608
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 213 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 272
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDVR 118
H + + IDPK T R + P + KIFVGG+ E ++R
Sbjct: 273 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 332
Query: 119 DYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 333 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 391
>gi|340515592|gb|EGR45845.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 99/161 (61%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV ++ D +G+SRGF F+T+ K V +++
Sbjct: 113 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTV-NIVMV 171
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H++ K IDPKR R K KIFVGG++ + T+Q+ R+YF+Q+G + + DK
Sbjct: 172 KEHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDK 231
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+ + D + P + I GK ++VK+ +
Sbjct: 232 DTGRPRGFGFVTFESEAGVDACINVPLE-IHGKPIEVKKAQ 271
>gi|226483449|emb|CAX74025.1| Heterogeneous nuclear ribonucleoprotein 27C [Schistosoma japonicum]
Length = 543
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
P N+ KLFVGGLH++T + YFS++G++E ++ D TG+SRGF +V + ++
Sbjct: 5 PQGNEVGKLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDES 64
Query: 71 VDDLLAAGDHYIGNKKIDPKRVT---KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
VD +L H I K++DPKR K N K+FVGG+ + E +R++FS YG +
Sbjct: 65 VDWVLRQKTHLIDLKEVDPKRCNVNMKGKNRRSLKVFVGGIAFDHDENIIRNFFSSYGRV 124
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
T+ ++K +GF F+ F+D+ V ++K + GK+V++K +K
Sbjct: 125 TDVNLLAGQTKPRHRGFAFVGFEDEEVVRNLIKLHYLNLNGKQVEIKAMK 174
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+FVGGL T ++ YFS++G I E D +GF ++ F + D VL+
Sbjct: 12 KLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDESVDWVLRQ 71
Query: 162 PKQVICGKEVDVKRVKFN 179
+I KEVD KR N
Sbjct: 72 KTHLIDLKEVDPKRCNVN 89
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL R+T +FS+YGE+ I D TGQ RGF FVTY +D ++
Sbjct: 43 KIFIGGLSRSTTSSAFTKHFSKYGELTDSVIMKDRLTGQPRGFGFVTYADPSVIDKVIQD 102
Query: 78 GDHYIGNKKIDPKRVTKRVN----PLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + K ++ KR R N P K+FVGG+ T ITE + +DYFS++G + E Q
Sbjct: 103 -KHILDGKTVEIKRTIPRGNSSKAPKTKKVFVGGIPTSITEDEFKDYFSKFGKVVEHQIM 161
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQV-ICGKEVDVKRVKFNPETMGSVSGAVRG 192
D++ +GF FI+F+ + ++++ + + + GK+V++K+ + P+ +G + G
Sbjct: 162 QDRNTGRSRGFGFITFETEQAVEEIISQGRMLELGGKQVEIKKAE--PKKPLPDAGPIYG 219
Query: 193 AGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYG 227
+R PG V + +Y G+ A YG
Sbjct: 220 VDSRP-------PYIPGGVGGFGDSYNGFGGAGYG 247
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
R N + P +K+FVGG+ + E E DYFS++G+V I D TG+SRGF F+
Sbjct: 119 RGNSSKAP---KTKKVFVGGIPTSITEDEFKDYFSKFGKVVEHQIMQDRNTGRSRGFGFI 175
Query: 64 TYTTQKAVDDLLAAGDHY-IGNKKIDPKRVTKRVNPL 99
T+ T++AV+++++ G +G K+++ K+ + PL
Sbjct: 176 TFETEQAVEEIISQGRMLELGGKQVEIKKAEPK-KPL 211
>gi|50604140|gb|AAH77252.1| LOC398218 protein [Xenopus laevis]
Length = 405
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 112/240 (46%), Gaps = 28/240 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 78 GDHYIGNKKIDPKRVTKR--------------------VNPLKCKIFVGGLTTEITEQDV 117
H + + IDPK T R N KIFVGG+ E ++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETEL 130
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
++YF+++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR
Sbjct: 131 KEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA- 189
Query: 178 FNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADY----GYTAGSY 233
E S S G+ + A + A G P T+ GY+ G T G Y
Sbjct: 190 ---EPRDSKSQTPGPPGSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIGGY 246
>gi|348523119|ref|XP_003449071.1| PREDICTED: DAZ-associated protein 1-like [Oreochromis niloticus]
Length = 435
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 112/238 (47%), Gaps = 26/238 (10%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + +YFSQYGEV I D T QSRGF FV + V +L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC-----------------KIFVGGLTTEITEQDVRD 119
H + + IDPK T R + P K KIFVGG+ E ++RD
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPELRD 131
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFN 179
YF+++G +TE +D K +GF FI+F+ + DQ + I GK+V+VK+ +
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 180 ----PETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSY 233
P +G A RG + SA + A P + P G + G G Y
Sbjct: 192 DSKAPGQLGPGQWAPRG----ILSAANGWTAQPAQGWQQPYGPQGVWVSTTGQPIGGY 245
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ N GE E+ DYF+++G V + + D + RGF F+T+ +++VD
Sbjct: 110 NKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQ 169
Query: 74 LLAAGDHYIGNKKIDPKRVTKR 95
+ H I KK++ K+ R
Sbjct: 170 AVNMHFHDIMGKKVEVKKAEPR 191
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 19/180 (10%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA
Sbjct: 56 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 115
Query: 77 AGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDV 117
+ H + + IDPK T R + P + KIFVGG+ E ++
Sbjct: 116 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETEL 175
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 176 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 235
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N K+FVGG+ N GE E+ +YF ++G V + + D + RGF F+T+ +++VD
Sbjct: 156 NKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 215
Query: 74 LLAAGDHYIGNKKIDPKRVTKR 95
+ H I KK++ KR R
Sbjct: 216 AVNMHFHDIMGKKVEVKRAEPR 237
>gi|433286562|pdb|2LYV|A Chain A, Solution Structure Of The Two Rrm Domains Of Hnrnp A1
(up1) Using Segmental Isotope Labeling
Length = 197
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 8/183 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 15 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 74
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 75 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 134
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S +
Sbjct: 135 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASSS 193
Query: 190 VRG 192
RG
Sbjct: 194 QRG 196
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
GP ++ K+F+GGL+ T ++ + +YFSQ+GEV ++ D TG+SRGF F+T+ K
Sbjct: 109 GPNSKEDGKMFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPK 168
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V +++ +HY+ K IDPKR R K KIFVGG++ + T+Q+ +D+F+Q+G +
Sbjct: 169 TV-NIVMVKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFKDFFAQFGRVV 227
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++F+ + D L + I GK ++VK+ +
Sbjct: 228 DATLMMDKDTGRPRGFGFVTFESEAGVDACLAQELE-IHGKPIEVKKAQ 275
>gi|328711026|ref|XP_001943905.2| PREDICTED: hypothetical protein LOC100169433 [Acyrthosiphon pisum]
Length = 530
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ YF +G+V ++ I DP T +SRGF F+T++ + V+ +LA
Sbjct: 219 KLFVGGLSWQTSADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAETVEKVLAV 278
Query: 78 GDHYIGNKKIDPKRVTKRVNP----LKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P KIFVGG++ + T +V+ YFSQ+G + E
Sbjct: 279 PIHTLDGKKIDPKHATPKNRPKAGSKTKKIFVGGVSQDTTADEVKAYFSQFGKVEETVML 338
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ +GF F++F++ ++ D + + I K+V+ K+ +
Sbjct: 339 MDQHTKRHRGFGFVTFENDDIVDTICEIHFHTIKNKKVECKKAQ 382
>gi|20664272|pdb|1L3K|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
gi|55670114|pdb|1U1K|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt 7da
Ggg); A Human Telomeric Repeat Containing
7-Deaza-Adenine
gi|55670116|pdb|1U1L|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt Prn
Ggg); A Human Telomeric Repeat Containing Nebularine
gi|55670118|pdb|1U1M|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 7gu
Gg); A Human Telomeric Repeat Containing 7-Deaza-Guanine
gi|55670120|pdb|1U1N|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta (Prn)
Gg); A Human Telomeric Repeat Containing Nebularine
gi|55670122|pdb|1U1O|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggttag(Di)g); A Human Telomeric Repeat Containing
Inosine
gi|55670124|pdb|1U1P|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 2pr
Gg); A Human Telomeric Repeat Containing 2-Aminopurine
gi|55670126|pdb|1U1Q|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggtta(Di)gg); A Human Telomeric Repeat Containing
Inosine
gi|55670128|pdb|1U1R|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(2pr)
G); A Human Telomeric Repeat Containing 2-Aminopurine
Length = 196
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 8/183 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S +
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASSS 192
Query: 190 VRG 192
RG
Sbjct: 193 QRG 195
>gi|198431578|ref|XP_002128542.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 334
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GG+ T ++ +NDYFS+YG++E + D TG+S+GF FVT+ T+ D +
Sbjct: 13 RKLFIGGISYETTDESMNDYFSKYGKIEDCVVIKDSSTGRSKGFGFVTFETEAEADACMD 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
H + +++ID KR R +K KIF+GGL E ++++YF Q+G+I
Sbjct: 73 DRPHTLNSRQIDVKRAVSREESVKPGAHFQVKKIFIGGLKDGCDETNLKEYFGQFGTIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
F+ P ++ +GF FI+F+D + D+++ + G +VK+
Sbjct: 133 FELPLERDSEKPRGFAFITFEDHDTVDKLVAKRHHYVNGVRCEVKK 178
>gi|291407048|ref|XP_002719860.1| PREDICTED: musashi 1 [Oryctolagus cuniculus]
Length = 568
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 30/240 (12%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-R 91
+ +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA H + +K IDPK
Sbjct: 242 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFADQAGVDKVLAQSRHELDSKTIDPKVA 301
Query: 92 VTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
+R P KIFVGGL+ T +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 302 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFV 361
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAA 207
+F+ +++ ++V + I K V+ K K P+ + S +G+ RG
Sbjct: 362 TFESEDIVEKVCEIHFHEINNKMVECK--KAQPKEVMSPTGSARGR-------------- 405
Query: 208 PGRVVAYPSTYAGYAAADYGYTAGSYDAY-ATAYPGYDYSAM--GYAYPAPAVQTMDTPL 264
RV+ Y G A G Y + AT Y Y+ + GY Y P + TPL
Sbjct: 406 -SRVMPY-----GMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYTYQFPEFRVERTPL 459
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 315 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 374
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 375 IHFHEINNKMVECKK 389
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 112 ITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEV 171
+ + +R+YF Q+G + E D +GF F++F DQ D+VL + + K +
Sbjct: 237 VVAEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFADQAGVDKVLAQSRHELDSKTI 296
Query: 172 DVK 174
D K
Sbjct: 297 DPK 299
>gi|209155336|gb|ACI33900.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 348
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 99/168 (58%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A G D K+FVGGL +T +K++ DYFS++GEV +IK D TG+SRGF F+ +
Sbjct: 75 NASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKE 134
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
VD +L +H + ++IDPK+ + + P+K KIFVGGL + ++ +++YF +G
Sbjct: 135 AAGVDKVLEQKEHRLDGRQIDPKKAMAMKKEPVK-KIFVGGLNPDTEKEVIQEYFGTFGE 193
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D ++GF FI++ D+ +VL+ + G + ++K
Sbjct: 194 IETIELPQDPKTEKRRGFVFITYKDETPVKKVLEKKFHNVSGSKCEIK 241
>gi|348550391|ref|XP_003461015.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1-like
[Cavia porcellus]
Length = 406
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V SA +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPSAANGWAGQP 222
>gi|322799899|gb|EFZ21040.1| hypothetical protein SINV_06138 [Solenopsis invicta]
Length = 373
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F Q+GE+ + + DP T +SRGF F+TY+ VDD
Sbjct: 10 RKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 69
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K+FVGGL + E+D+R YF YGSI
Sbjct: 70 ARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINS 129
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D++ I GK VDVK+
Sbjct: 130 ISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKK 175
>gi|148699625|gb|EDL31572.1| DAZ associated protein 1, isoform CRA_a [Mus musculus]
gi|149034565|gb|EDL89302.1| DAZ associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 112/233 (48%), Gaps = 23/233 (9%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 3 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 62
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC-----------------KIFVGGLTTEITEQDVRD 119
H + + IDPK T R + P + KIFVGG+ E ++R+
Sbjct: 63 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETELRE 122
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFN 179
YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR
Sbjct: 123 YFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA--- 179
Query: 180 PETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTY-AGYAAADYGYTAG 231
E S + A GA + A +AA G P T+ GY AG
Sbjct: 180 -EPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPAG 231
>gi|71894833|ref|NP_001026599.1| DAZ-associated protein 1 [Gallus gallus]
gi|53127644|emb|CAG31151.1| hypothetical protein RCJMB04_2n4 [Gallus gallus]
Length = 409
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 6 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 65
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 66 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNC 125
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 126 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 185
Query: 173 VKRVKFNPETMGSVSGAVRGA---GARV-SSAGAAYAAAP 208
VKR + P S + GA G+R+ SA +A P
Sbjct: 186 VKRAE--PRDSKSQTPGPPGASQWGSRIMPSAANGWAGQP 223
>gi|8895708|gb|AAF81071.1|AF225910_1 DAZ-associated protein 1 [Mus musculus]
Length = 405
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC-----------------KIFVGGLTTEIT 113
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCG 124
Query: 114 EQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDV 173
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+V
Sbjct: 125 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEV 184
Query: 174 KRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTY 218
KR E S + A GA + A +AA G P T+
Sbjct: 185 KRA----EPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTW 225
>gi|169790823|ref|NP_001116077.1| DAZ-associated protein 1 isoform c [Mus musculus]
gi|74195100|dbj|BAE28294.1| unnamed protein product [Mus musculus]
gi|148699626|gb|EDL31573.1| DAZ associated protein 1, isoform CRA_b [Mus musculus]
Length = 406
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC-----------------KIFVGGLTTEIT 113
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCG 124
Query: 114 EQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDV 173
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+V
Sbjct: 125 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEV 184
Query: 174 KRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTY 218
KR E S + A GA + A +AA G P T+
Sbjct: 185 KRA----EPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTW 225
>gi|395513319|ref|XP_003760874.1| PREDICTED: DAZ-associated protein 1 [Sarcophilus harrisii]
Length = 424
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 19/180 (10%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA
Sbjct: 27 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 86
Query: 77 AGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDV 117
+ H + + IDPK T R + P + KIFVGG+ E ++
Sbjct: 87 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETEL 146
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 147 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 206
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N K+FVGG+ N GE E+ +YF ++G V + + D + RGF F+T+ +++VD
Sbjct: 127 NKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 186
Query: 74 LLAAGDHYIGNKKIDPKRVTKR 95
+ H I KK++ KR R
Sbjct: 187 AVNMHFHDIMGKKVEVKRAEPR 208
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLF+GGL+ T E ++ DYFS+YG V + I D TG+SRGF F+T+ +VD+++
Sbjct: 194 KLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFELSSSVDEVVKT 253
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++F+Q+G+I + Q DK
Sbjct: 254 -QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDK 312
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
+GF FI++D D+V +N GK++++KR
Sbjct: 313 DTGRSRGFGFITYDSSEAVDRVCQNKYIDFKGKQIEIKRA 352
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL E TE ++DYFS+YG++ + + D + +GF F++F+ + D+V+K
Sbjct: 193 CKLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFELSSSVDEVVK 252
Query: 161 NPKQVICGKEVDVKRV 176
+ ++ GK +D KR
Sbjct: 253 T-QHILDGKVIDPKRA 267
>gi|71043670|ref|NP_001020913.1| DAZ-associated protein 1 [Rattus norvegicus]
gi|169790818|ref|NP_573451.2| DAZ-associated protein 1 isoform a [Mus musculus]
gi|68534156|gb|AAH98930.1| DAZ associated protein 1 [Rattus norvegicus]
gi|148699628|gb|EDL31575.1| DAZ associated protein 1, isoform CRA_d [Mus musculus]
gi|149034564|gb|EDL89301.1| DAZ associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC-----------------KIFVGGLTTEIT 113
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCG 124
Query: 114 EQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDV 173
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+V
Sbjct: 125 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEV 184
Query: 174 KRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTY 218
KR E S + A GA + A +AA G P T+
Sbjct: 185 KRA----EPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTW 225
>gi|39654464|pdb|1PGZ|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(6-Mi)
G); A Human Telomeric Repeat Containing 6-Methyl-8-(2-
Deoxy-Beta-Ribofuranosyl)isoxanthopteridine (6-Mi)
Length = 195
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 8/183 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 13 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S +
Sbjct: 133 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASSS 191
Query: 190 VRG 192
RG
Sbjct: 192 QRG 194
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 5/165 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++++YF +G V + I DP T +SRGF F+T+ +VD +L
Sbjct: 183 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 242
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + KKIDPK T + P KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 243 PIHTLDGKKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 302
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ +GF F++F++++V D+V + I K+V+ K+ +
Sbjct: 303 LMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ 347
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G+VE + D T + RGF FVT+ + VD
Sbjct: 268 NKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 327
Query: 74 LLAAGDHYIGNKKIDPKRVTKR--VNP-----LKCKIFVGGL 108
+ H I NKK++ K+ + V P L+ +I +G L
Sbjct: 328 VCEIHFHTIKNKKVECKKAQPKEAVAPTAQQLLQKRIILGNL 369
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + + + +YF +G++T+ D +GF FI+F + N D
Sbjct: 178 DPAPGKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVD 237
Query: 157 QVLKNPKQVICGKEVDVKRV--KFNPET 182
+VL+ P + GK++D K K P+T
Sbjct: 238 KVLQVPIHTLDGKKIDPKHATPKNRPKT 265
>gi|390354396|ref|XP_003728322.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Strongylocentrotus purpuratus]
Length = 410
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 5/190 (2%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G +D K+FVGGL T + YF Q+GEV+ I D T +SRGF FVT++ V
Sbjct: 16 GNHDPGKMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHV 75
Query: 72 DDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+ ++ G H + KK+DPK KR +P KIFVGG+ TE ++ +F +YG
Sbjct: 76 ETVIQRGTHEVDKKKVDPKVAFPKRSHPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGK 135
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
+ E FD++ N +GF F+ FD++ D V + + GK V+VK+ + M
Sbjct: 136 VEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKKAQPKEVMMPQN 195
Query: 187 SGAVRGAGAR 196
+ R A R
Sbjct: 196 AAKNRAAMMR 205
>gi|417400375|gb|JAA47137.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 406
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-------------------VNPLKCKIFVGGLTTEI 112
+LA+ H + + IDPK T R N KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V SA +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPSAANGWAGQP 222
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 6/165 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF +G V + I DP T +SRGF F+T+ +VD +L
Sbjct: 56 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 115
Query: 78 GDHYIGNKKIDPKRVT-----KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + KKIDPK T K+ N K KIFVGG++ + + ++V+ YF+Q+G + E
Sbjct: 116 PIHTLDGKKIDPKHATPKNRAKQANRTK-KIFVGGVSQDTSSEEVKAYFNQFGKVEETVM 174
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ +GF F++F++++V D+V + I K+V+ K+ +
Sbjct: 175 LMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ 219
>gi|389623913|ref|XP_003709610.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
gi|351649139|gb|EHA56998.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
Length = 568
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 10 GPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
GP ++ K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K
Sbjct: 112 GPNSKEDGKMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPK 171
Query: 70 AVDDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSIT 128
V +++ +HY+ K IDPKR R K KIFVGG++ E T+Q+ +D+F+Q+G +
Sbjct: 172 TV-NIVMVKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVV 230
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++F+ + + L + I GK ++VK+ +
Sbjct: 231 DATLMMDKDTGRPRGFGFVTFESEAGVEACLARDLE-IHGKLIEVKKAQ 278
>gi|224087811|ref|XP_002194831.1| PREDICTED: DAZ-associated protein 1 [Taeniopygia guttata]
Length = 410
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 108/214 (50%), Gaps = 25/214 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 13 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 72
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDVR 118
H + + IDPK T R + P + KIFVGG+ E ++R
Sbjct: 73 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELR 132
Query: 119 DYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKF 178
+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 133 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE- 191
Query: 179 NPETMGSVSGAVRGA---GARV-SSAGAAYAAAP 208
P S + GA G+R+ SA +A P
Sbjct: 192 -PRDSKSQTPGPPGASQWGSRIMPSAANGWAGQP 224
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N K+FVGG+ N GE E+ +YF ++G V + + D + RGF F+T+ +++VD
Sbjct: 112 NKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 171
Query: 74 LLAAGDHYIGNKKIDPKRVTKR 95
+ H I KK++ KR R
Sbjct: 172 AVNMHFHDIMGKKVEVKRAEPR 193
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+DE+ KLFVGGL T ++ + YFS+YGEV + + +G+SRGF FVT++ V
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVG 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +F ++G
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E +D+ K +GF F+SF+D++ D+ + + GK+V++KR +
Sbjct: 129 VMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAE 179
>gi|339233086|ref|XP_003381660.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
gi|316979494|gb|EFV62286.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
Length = 322
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 99/166 (59%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+F+GG+ NT ++++ ++S++GE+ + + DP + +SRGF FVTY + V+ +A
Sbjct: 27 RKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKRSRGFGFVTYADPEQVNAAMA 86
Query: 77 AGDHYIGNKKIDPKRVTKR--VNPLKC-----KIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I K+++PKR + +N + K+++ G+ E TE +R+YF QYGS+ E
Sbjct: 87 ARPHLIDGKEVEPKRAMPKDVMNKPEAHISVKKVYISGIKDEHTEDMLREYFMQYGSVQE 146
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
D+ K+GF F++FDD + D+V+ +I K DVK+
Sbjct: 147 VDIKVDQGTGKKRGFAFVTFDDYDPVDRVVLEKSHMIDNKRCDVKK 192
>gi|354547999|emb|CCE44734.1| hypothetical protein CPAR2_405380 [Candida parapsilosis]
Length = 513
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 98/160 (61%), Gaps = 2/160 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E+ + +YFS++GE+ +I D TG+SRGF F+T+ AVD ++
Sbjct: 194 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVD-VVIK 252
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
DH + K IDPKR R + + KIF+GG+ ++E + ++FS++G+I + Q DK
Sbjct: 253 QDHILDGKLIDPKRAISREDQDRVGKIFIGGIDPMVSEGEFNEFFSKFGTIIDCQLMIDK 312
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
+GF FI+FD + D+V N + GK ++VKR
Sbjct: 313 DTGRSRGFGFITFDSPDAVDRVCVNKYLTLKGKAMEVKRA 352
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GG+ E E N++FS++G + + D TG+SRGF F+T+ + AVD +
Sbjct: 278 KIFIGGIDPMVSEGEFNEFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVN 337
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 338 KYLTLKGKAMEVKRAAPR 355
>gi|74214542|dbj|BAE31119.1| unnamed protein product [Mus musculus]
gi|74214594|dbj|BAE31140.1| unnamed protein product [Mus musculus]
Length = 405
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC-----------------KIFVGGLTTEIT 113
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPEQTRPKEGWKGPRSDSSKSNKIFVGGIPHNCG 124
Query: 114 EQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDV 173
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + + I GK+V+V
Sbjct: 125 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFRDIMGKKVEV 184
Query: 174 KRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTY 218
KR E S + A GA + A +AA G P T+
Sbjct: 185 KRA----EPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTW 225
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 96/176 (54%), Gaps = 12/176 (6%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
T+ PG K+F+GGL R T YFS+YGE+ I D TG RGF FVTY
Sbjct: 47 TSSPG-----KIFIGGLSRETSSATFTKYFSKYGELTDSVIMKDRATGNPRGFGFVTYAD 101
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVTKRVN-----PLKCKIFVGGLTTEITEQDVRDYFS 122
VD ++ H+I K ++ KR R N P KIFVGG+ T ITE + +DYFS
Sbjct: 102 PSVVDKVIKD-KHFIDGKMVEIKRTIPRGNAATKGPKTKKIFVGGIPTSITEDEFKDYFS 160
Query: 123 QYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQV-ICGKEVDVKRVK 177
++G + E Q D +GF F++FD + +++L + K + GK+V++K+ +
Sbjct: 161 KFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEEILSHGKMCELGGKQVEIKKAE 216
>gi|410256498|gb|JAA16216.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298130|gb|JAA27665.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 222
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +A
Sbjct: 37 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMA 96
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 97 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 156
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +VK+ E + +
Sbjct: 157 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQTATAQR 216
Query: 190 VRGAGA 195
RG+ +
Sbjct: 217 NRGSSS 222
>gi|296232416|ref|XP_002761578.1| PREDICTED: DAZ-associated protein 1 [Callithrix jacchus]
Length = 407
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 110/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S GA G+R V SA +A P
Sbjct: 185 VKRAE--PRDSKSQPPGQPGASQWGSRVVPSAANGWAGQP 222
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 111/226 (49%), Gaps = 23/226 (10%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTY 218
VKR E S + A GA + A +AA G P T+
Sbjct: 185 VKRA----EPRDSKNQAPGQPGASQWGSRVAPSAANGWAGQPPPTW 226
>gi|410225574|gb|JAA10006.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVK 177
VKR +
Sbjct: 185 VKRAE 189
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL+ T + + +FS++GE+ + DP T +SRGF F+TY VDD +
Sbjct: 13 RKLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYKRASMVDDAMR 72
Query: 77 AGDHYIGNKKIDPKRVTKRV---NPLK----CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
+ H I ++++PKR R NPL KIFVGG+ + +E +RDYFS+YGSI
Sbjct: 73 SRPHKIDGREVEPKRAVAREESGNPLAHMLVKKIFVGGIKEDTSEDHLRDYFSKYGSIES 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F++FDD + D+++ I + +VK+
Sbjct: 133 VDVISDKDTGKKRGFAFVTFDDHDPVDKIVGLKYHTINDHKSEVKK 178
>gi|25470890|ref|NP_733829.1| DAZ-associated protein 1 isoform a [Homo sapiens]
gi|395750099|ref|XP_003779062.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Pongo abelii]
gi|402903561|ref|XP_003914632.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Papio anubis]
gi|119589909|gb|EAW69503.1| DAZ associated protein 1, isoform CRA_c [Homo sapiens]
Length = 378
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 222
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 100/177 (56%), Gaps = 8/177 (4%)
Query: 6 NGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTY 65
N T+ P KLFVGGL T +++++YF +G+V + I DP T +SRGF F+T+
Sbjct: 159 NSTSDPAPG---KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITF 215
Query: 66 TTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKC-----KIFVGGLTTEITEQDVRDY 120
+VD +L H + KKIDPK T + P KIFVGG++ + + ++V+ Y
Sbjct: 216 QEPNSVDKVLKVPIHTLDGKKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVKQY 275
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
FSQ+G + E D+ +GF F++F+ ++V D+V + I K+V+ K+ +
Sbjct: 276 FSQFGKVEETVMLMDQQTKRHRGFGFVTFEHEDVVDRVCEIHFHTIKNKKVECKKAQ 332
>gi|410921768|ref|XP_003974355.1| PREDICTED: DAZ-associated protein 1-like [Takifugu rubripes]
Length = 435
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 112/238 (47%), Gaps = 26/238 (10%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + +YFSQYGEV I D T QSRGF FV + V +L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC-----------------KIFVGGLTTEITEQDVRD 119
H + + IDPK T R + P K KIFVGG+ E ++RD
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPELRD 131
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFN 179
YF+++G++TE +D K +GF FI+F+ + DQ + I GK+V+VK+ +
Sbjct: 132 YFNRFGAVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 180 ----PETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSY 233
P +G A RG + +A + P + P G + G G Y
Sbjct: 192 DSKAPGQLGPGQWAPRG----ILTAANGWTTQPAQGWQQPYGPQGVWVSTTGQPIGGY 245
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ N GE E+ DYF+++G V + + D + RGF F+T+ +++VD
Sbjct: 110 NKSKKIFVGGIPHNCGEPELRDYFNRFGAVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQ 169
Query: 74 LLAAGDHYIGNKKIDPKRVTKR 95
+ H I KK++ K+ R
Sbjct: 170 AVNMHFHDIMGKKVEVKKAEPR 191
>gi|170585852|ref|XP_001897696.1| RNA recognition motif containing protein [Brugia malayi]
gi|312066609|ref|XP_003136351.1| RNA recognition domain-containing protein containing protein [Loa
loa]
gi|158595003|gb|EDP33580.1| RNA recognition motif containing protein, putative [Brugia malayi]
gi|307768478|gb|EFO27712.1| RNA recognition domain-containing protein containing protein [Loa
loa]
gi|402585724|gb|EJW79663.1| RNA-binding protein [Wuchereria bancrofti]
Length = 300
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 99/162 (61%), Gaps = 3/162 (1%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N+++K+FVGG+ + ++++ YFSQYGEV +K D TG+SRGFAFV +TT +A
Sbjct: 35 NEDKKIFVGGIAYDVTNEDLSQYFSQYGEVAQAQVKYDRNTGRSRGFAFVEFTTGEACRA 94
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
L A + + K ++ K R N K+FVGGL + E+++R +F QYG + + + P
Sbjct: 95 ALNAREQSLKGKTVEVKPAKSRENK---KVFVGGLPADHPEEELRAHFEQYGKVEDIEWP 151
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
FDK ++ F FI F+++ A++ PKQ+ +E DVK+
Sbjct: 152 FDKQTKARRNFAFIVFEEEEAAERASATPKQMFGSRECDVKK 193
>gi|148223810|ref|NP_001082088.1| DAZ-associated protein 1 [Xenopus laevis]
gi|44887870|sp|Q98SJ2.1|DAZP1_XENLA RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1; AltName:
Full=Proline-rich Vg1 mRNA-binding protein
gi|13488613|gb|AAK26172.1| proline-rich Vg1 mRNA-binding protein [Xenopus laevis]
Length = 360
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 112/240 (46%), Gaps = 28/240 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 78 GDHYIGNKKIDPKRVTKR--------------------VNPLKCKIFVGGLTTEITEQDV 117
H + + IDPK T R N KIFVGG+ E ++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETEL 130
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
++YF+++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR
Sbjct: 131 KEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA- 189
Query: 178 FNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADY----GYTAGSY 233
E S S G+ + A + A G P T+ GY+ G T G Y
Sbjct: 190 ---EPRDSKSQTPGPPGSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIGGY 246
>gi|331284184|ref|NP_001193585.1| RNA-binding protein Musashi homolog 2 [Bos taurus]
Length = 354
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 116/252 (46%), Gaps = 45/252 (17%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 78 GDHYIGNKKIDPKR------------VTKRVNPLKC-----------------------K 102
H + +K IDPK +T+ NP K
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKGTFLTQGSNPRLLHWQADSLPLSHQDPRHAMVTRTKK 137
Query: 103 IFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK-- 160
IFVGGL+ +DV+ YF Q+G + + FDK+ N +GF F++F++++V ++V +
Sbjct: 138 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIH 197
Query: 161 ----NPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPS 216
N K V C K+ K V F P T G G A + G P V Y
Sbjct: 198 FHEINNKMVEC-KKAQPKEVMFPPGTRGRARGLPYTMDAFM--LGMGMLGYPNFVATYGR 254
Query: 217 TYAGYAAADYGY 228
Y G+A + YGY
Sbjct: 255 GYPGFAPS-YGY 265
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 136 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 195
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 196 IHFHEINNKMVECKKAQPK 214
>gi|390354400|ref|XP_001199490.2| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Strongylocentrotus purpuratus]
Length = 318
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G +D K+FVGGL T + YF Q+GEV+ I D T +SRGF FVT++ V
Sbjct: 16 GNHDPGKMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHV 75
Query: 72 DDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+ ++ G H + KK+DPK KR +P KIFVGG+ TE ++ +F +YG
Sbjct: 76 ETVIQRGTHEVDKKKVDPKVAFPKRSHPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGK 135
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E FD++ N +GF F+ FD++ D V + + GK V+VK+ +
Sbjct: 136 VEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKKAQ 186
>gi|223647556|gb|ACN10536.1| Heterogeneous nuclear ribonucleoprotein A/B [Salmo salar]
Length = 344
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 100/168 (59%), Gaps = 2/168 (1%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
A G D K+FVGGL +T +K++ DYFS++GEV +IK D TG+SRGF F+ +
Sbjct: 72 NASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKE 131
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+VD +L +H + ++IDPK+ + + P+K KIFVGGL + ++ +++YF +G
Sbjct: 132 AVSVDKVLEQKEHRLDGRQIDPKKAMAMKKEPVK-KIFVGGLNPDTDKEVIQEYFGTFGE 190
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
I + P D ++GF FI++ D+ +VL+ + G + ++K
Sbjct: 191 IETIELPQDPKTEKRRGFVFITYKDETPVKKVLEKKFHNVSGSKCEIK 238
>gi|194741664|ref|XP_001953309.1| GF17697 [Drosophila ananassae]
gi|190626368|gb|EDV41892.1| GF17697 [Drosophila ananassae]
Length = 634
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 94/164 (57%), Gaps = 4/164 (2%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ +YF+ +G V + I DP T +SRGF F+T+ V +L
Sbjct: 206 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVQKVLKV 265
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
H + KKIDPK T + P + KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 266 PIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVML 325
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ +GF F++F++++V D+V + I K+V+ K+ +
Sbjct: 326 MDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ 369
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G VE + D T + RGF FVT+ + VD
Sbjct: 290 NKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 349
Query: 74 LLAAGDHYIGNKKIDPKR------VTKRVNPLKCKIFVGGLTTEI 112
+ H I NKK++ K+ VT L+ +I +G L ++
Sbjct: 350 VCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 394
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + +++YF+ +G++T+ D +GF FI+F +
Sbjct: 201 DPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVQ 260
Query: 157 QVLKNPKQVICGKEVDVK 174
+VLK P + GK++D K
Sbjct: 261 KVLKVPIHTLDGKKIDPK 278
>gi|47221330|emb|CAF97248.1| unnamed protein product [Tetraodon nigroviridis]
Length = 312
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A G D K+FVGGL +T +K++ DYF+++G+V +IK D +G+SRGF FV +
Sbjct: 48 ATKGDEDTGKMFVGGLSWDTSKKDLKDYFTKFGDVSDCTIKFDSDSGRSRGFGFVLFKDP 107
Query: 69 KAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
+V+ +L +H + + IDPKR + + P+K KIFVGGL E TE+ +R+YF +G I
Sbjct: 108 SSVEKVLQQKEHRLDGRLIDPKRAMAMKKEPVK-KIFVGGLNPEATEETIREYFGAFGEI 166
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
P D ++GF FI++ ++ A + L+ + G ++K
Sbjct: 167 ENIDLPLDPKSKKRRGFIFITYKEEASAKKCLEKKFHTVEGSRCELK 213
>gi|302307303|ref|NP_983936.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|299788936|gb|AAS51760.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|374107149|gb|AEY96057.1| FADL160Wp [Ashbya gossypii FDAG1]
Length = 526
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ T E + +YFS+YG V + I D TG+SRGF F+++ +VD++
Sbjct: 161 DINKMFIGGLNWETTEDNLREYFSKYGNVTEVKIMRDGTTGRSRGFGFLSFADASSVDEV 220
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+GSI + Q
Sbjct: 221 VKT-QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLM 279
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF FI++D + D+V +N GK +++KR +
Sbjct: 280 LDKDTGRSRGFGFITYDSPDAVDRVCQNKFIEFKGKRIEIKRAE 323
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 5/165 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++++YF +G V + I DP T +SRGF F+T+ +VD +L
Sbjct: 112 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 171
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + KKIDPK T + P KIFVGG++ + + ++V+ YFSQ+G + E
Sbjct: 172 PIHTLDGKKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 231
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ +GF F++F++++V D+V + I K+V+ K+ +
Sbjct: 232 LMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ 276
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 7/102 (6%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ ++T +E+ YFSQ+G+VE + D T + RGF FVT+ + VD
Sbjct: 197 NKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDR 256
Query: 74 LLAAGDHYIGNKKIDPKRVTKR--VNP-----LKCKIFVGGL 108
+ H I NKK++ K+ + V P L+ +I +G L
Sbjct: 257 VCEIHFHTIKNKKVECKKAQPKEAVAPTAQQLLQKRIILGNL 298
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 97 NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVAD 156
+P K+FVGGL+ + + + + +YF +G++T+ D +GF FI+F + N D
Sbjct: 107 DPAPGKLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVD 166
Query: 157 QVLKNPKQVICGKEVDVK 174
+VL+ P + GK++D K
Sbjct: 167 KVLQVPIHTLDGKKIDPK 184
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ T E+ + DYF++YG V + I D TG+SRGF F+T+ +VD++
Sbjct: 92 DNCKMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDEV 151
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR R K KIFVGG+ ++ ++ ++FSQYG+I + Q
Sbjct: 152 VKT-QHILDGKVIDPKRSIPREEQDKTGKIFVGGIGADVRPKEFEEFFSQYGNIIDAQLM 210
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F+++D + D+V ++ GK++++KR +
Sbjct: 211 LDKDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIEIKRAQ 254
>gi|387018108|gb|AFJ51172.1| Heterogeneous nuclear ribonucleoprotein A3-like [Crotalus
adamanteus]
Length = 225
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 100/186 (53%), Gaps = 7/186 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD ++
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGALTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +VK+ E + +
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQTATAQR 192
Query: 190 VRGAGA 195
RG+ +
Sbjct: 193 SRGSSS 198
>gi|390354398|ref|XP_003728323.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Strongylocentrotus purpuratus]
Length = 366
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 99/190 (52%), Gaps = 5/190 (2%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G +D K+FVGGL T + YF Q+GEV+ I D T +SRGF FVT++ V
Sbjct: 16 GNHDPGKMFVGGLSWETSTDGLRKYFCQFGEVKECVIMRDTTTRRSRGFGFVTFSDPAHV 75
Query: 72 DDLLAAGDHYIGNKKIDPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+ ++ G H + KK+DPK KR +P KIFVGG+ TE ++ +F +YG
Sbjct: 76 ETVIQRGTHEVDKKKVDPKVAFPKRSHPKPVSKTKKIFVGGIAASTTEPHLKKFFEKYGK 135
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
+ E FD++ N +GF F+ FD++ D V + + GK V+VK+ + M
Sbjct: 136 VEEVTLMFDRTTNRHRGFGFVIFDNEKTVDSVCEEHFHELDGKLVEVKKAQPKEVMMPQN 195
Query: 187 SGAVRGAGAR 196
+ R A R
Sbjct: 196 AAKNRAAMMR 205
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F ++G++ + + DP T +SRGF F+TY+ +D+
Sbjct: 30 RKLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 89
Query: 77 AGDHYIGNKKIDPKRVTKRVN-------PLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R + K+FVG L + EQ +RDYFS +GSI +
Sbjct: 90 ARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFSNFGSIVD 149
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D+V+ + + GK VDVK+
Sbjct: 150 INIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKK 195
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+DE+ KLFVGGL T ++ + YFS+YGEV + + +G+SRGF FVT++ V
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSDPSNVG 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +F ++G
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E +D+ K +GF F+SF+D++ D+ + + GK+V++KR +
Sbjct: 129 VMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQVEIKRAE 179
>gi|410348706|gb|JAA40957.1| DAZ associated protein 1 [Pan troglodytes]
Length = 426
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVK 177
VKR +
Sbjct: 185 VKRAE 189
>gi|119589908|gb|EAW69502.1| DAZ associated protein 1, isoform CRA_b [Homo sapiens]
Length = 405
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 109/219 (49%), Gaps = 24/219 (10%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR------------------VNPLKCKIFVGGLTTEIT 113
+LA+ H + + IDPK T R N KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDNSKSNKIFVGGIPHNCG 124
Query: 114 EQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDV 173
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+V
Sbjct: 125 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEV 184
Query: 174 KRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
KR + P S + GA G+R V +A +A P
Sbjct: 185 KRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 221
>gi|296193572|ref|XP_002744572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Callithrix jacchus]
Length = 256
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 99/156 (63%), Gaps = 5/156 (3%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL +T +K++ DYF+++GEV +IK DP TG+SRGF F+ + +V+ +L
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 60
Query: 79 DHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H + + IDPK+ + + +P+K KIFVGGL E TE+ +R+YF +G I + P
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVK-KIFVGGLNPEATEEKIREYFGDFGEIEAIELPMHPK 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDV 173
N ++GF FI+F +++V +VL+ K I E+ V
Sbjct: 120 LNKRRGFVFITFKERSVK-KVLE--KSFILSCEIKV 152
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLL 75
+K+FVGGL+ E++I +YF +GE+E+I + P + RGF F+T+ +++V +L
Sbjct: 83 KKIFVGGLNPEATEEKIREYFGDFGEIEAIELPMHPKLNKRRGFVFITF-KERSVKKVL 140
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+DE+ KLFVGGL T ++ + YF +YGEV + + +G+SRGF FVT++ V
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVP 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVN--PLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +F++YG
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRTFFNRYGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E +D+ K +GF F+SF+D++ D+ + + GK+V++KR +
Sbjct: 129 VMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAE 179
>gi|426230983|ref|XP_004009536.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Ovis
aries]
Length = 396
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 108/214 (50%), Gaps = 25/214 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 6 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 65
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDVR 118
H + + IDPK T R + P + KIFVGG+ E ++R
Sbjct: 66 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 125
Query: 119 DYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKF 178
+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 126 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE- 184
Query: 179 NPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
P S + GA G+R V +A +A P
Sbjct: 185 -PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 217
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 98 PLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQ 157
P K+FVGGL T++ +R YFSQYG + + DK+ N +GF F+ F D N
Sbjct: 2 PCSLKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 61
Query: 158 VLKNPKQVICGKEVDVK 174
VL + + G+ +D K
Sbjct: 62 VLASRPHTLDGRNIDPK 78
>gi|449468578|ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
gi|449509419|ref|XP_004163583.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
Length = 436
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 122/263 (46%), Gaps = 39/263 (14%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+DE KLF+GG+ +T E+++ DYFSQ+GEV I D TG+ RGF FV ++ +D
Sbjct: 3 SDEGKLFIGGIAWDTSEEKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQ 62
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPLKC---------------------KIFVGGLTTEI 112
+L H I ++++ KR R KIFVGGL + +
Sbjct: 63 VLQD-KHTIDGRQVEAKRALSREEQQTSTRSGINNSGRSSGGSGYFRTKKIFVGGLPSAL 121
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
TE R YF YG +T+ +D++ +GF FI+FD+++ D+VL + GK V+
Sbjct: 122 TEDGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFHELNGKLVE 181
Query: 173 VKRV---KFNPETMGSVSGAVRGAGARVS------SAGAAYAAAPGRVVAYPSTYAGYAA 223
VKR NP + G GA S S G Y +P Y+GY+
Sbjct: 182 VKRALPKDANPGSGGRAGYQNYGASGTNSNSFDGRSDGNRYMQPQSTAGGFP-PYSGYSV 240
Query: 224 ADYGYTA-------GSYDAYATA 239
+ YGY GSY +Y
Sbjct: 241 SGYGYGGPNSGVPYGSYGSYGVG 263
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F ++G + + + DP T +SRGF F+TY+ +D+
Sbjct: 2617 RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 2676
Query: 77 AGDHYIGNKKIDPKRVTKR-------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
+ H I + ++PKR R K+FVG L + EQ +RDYF +G+I +
Sbjct: 2677 SRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQNFGNIVD 2736
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D+V+ + + GK VDVK+
Sbjct: 2737 INIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKK 2782
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDYSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 222
>gi|440910410|gb|ELR60208.1| DAZ-associated protein 1, partial [Bos grunniens mutus]
Length = 386
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 108/214 (50%), Gaps = 25/214 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDVR 118
H + + IDPK T R + P + KIFVGG+ E ++R
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 120
Query: 119 DYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKF 178
+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE- 179
Query: 179 NPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
P S + GA G+R V +A +A P
Sbjct: 180 -PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 212
>gi|297275666|ref|XP_001094635.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Macaca mulatta]
Length = 407
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTPPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 222
>gi|300795706|ref|NP_001179960.1| DAZ-associated protein 1 [Bos taurus]
Length = 406
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 222
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 97/161 (60%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T E + DYFS+YG+V + I D TG+SRGF F+T+ +VD+++
Sbjct: 158 KMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFDEPSSVDEVVKT 217
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++F+Q+G+I + Q DK
Sbjct: 218 -QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDK 276
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N GK++++KR +
Sbjct: 277 DTGRSRGFGFVTYDSPDAVDRVCQNKFIDFKGKKIEIKRAE 317
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 96 VNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFIS 148
NP+K CK+F+GGL E TE +RDYFS+YG + + + D + +GF F++
Sbjct: 145 TNPVKADLSRDICKMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLT 204
Query: 149 FDDQNVADQVLKNPKQVICGKEVDVKRV 176
FD+ + D+V+K + ++ GK +D KR
Sbjct: 205 FDEPSSVDEVVKT-QHILDGKVIDPKRA 231
>gi|355702931|gb|EHH29422.1| Deleted in azoospermia-associated protein 1, partial [Macaca
mulatta]
gi|355755280|gb|EHH59027.1| Deleted in azoospermia-associated protein 1, partial [Macaca
fascicularis]
Length = 397
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 108/214 (50%), Gaps = 25/214 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDVR 118
H + + IDPK T R + P + KIFVGG+ E ++R
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 120
Query: 119 DYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKF 178
+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE- 179
Query: 179 NPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
P S + GA G+R V +A +A P
Sbjct: 180 -PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 212
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ + YF +YGEV + + +G+SRGF FVT++ V +L
Sbjct: 1 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQN 60
Query: 78 GDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
G H + + IDPK R P + K+F+GGL + +TE D+R YF+++G + E
Sbjct: 61 GPHQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSYFTRFGKVMEVV 120
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+D+ K +GF F+SF+D+ D+ + + GK+V++KR +
Sbjct: 121 IMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAE 166
>gi|345786818|ref|XP_003432858.1| PREDICTED: DAZ-associated protein 1 [Canis lupus familiaris]
Length = 407
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 222
>gi|195387610|ref|XP_002052487.1| GJ21323 [Drosophila virilis]
gi|194148944|gb|EDW64642.1| GJ21323 [Drosophila virilis]
Length = 421
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L +G H + + IDPK R P K K+F+GGL + +TE D+R +F +YG +T
Sbjct: 64 VLQSGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|344307817|ref|XP_003422575.1| PREDICTED: DAZ-associated protein 1 [Loxodonta africana]
Length = 407
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRIVPNAANGWAGQP 222
>gi|388580169|gb|EIM20486.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 335
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 104/172 (60%), Gaps = 3/172 (1%)
Query: 16 ERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLL 75
+RK+F+GGL+ +T E + +YFS++G V ++I DP T +SRGF F+T+ ++V D++
Sbjct: 43 QRKIFIGGLNWDTDEDSLRNYFSKFGNVVQLNIMRDPNTNRSRGFGFLTFDNLQSVQDVM 102
Query: 76 AAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGL-TTEITEQDVRDYFSQYGSITEFQQP 133
DH++ K IDPKR R K KIFVGG+ T EQ V ++ S +G +T+
Sbjct: 103 IR-DHWLDGKLIDPKRNMYRHENFKHKKIFVGGIPLTMPVEQVVENFESVFGQVTDANLM 161
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGS 185
+DK +GF F++F+ + A+ +K + + GK V+VKRV+ E G+
Sbjct: 162 YDKETGRSRGFGFLTFETEQQAEDAVKEGRFDLEGKSVEVKRVQTRNERSGT 213
>gi|226478812|emb|CAX72901.1| RNA-binding protein Musashi homolog 2 [Schistosoma japonicum]
Length = 345
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 96/169 (56%), Gaps = 7/169 (4%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + DYF +YGE+ I DP T +SRGF FVT++ V+
Sbjct: 75 NDPGKMFIGGLSPTTTSEVLRDYFQKYGELREYMIMRDPLTKRSRGFGFVTFSDPMCVEK 134
Query: 74 LLAAGDHYIGNKKIDPKRVTKR-------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+L A H + KKIDPK R ++ ++F+GG+ T+ T +++ +YFSQ+G
Sbjct: 135 VLEAAPHILDFKKIDPKLAVPRKSGQNTKISTKTKRVFIGGVATQTTNEELSEYFSQFGK 194
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ + DKS N +GF F++F+ + A++V + + K V+ K+
Sbjct: 195 LESCELMMDKSTNRHRGFGFVTFESEESAEKVCEIHFHDLHNKMVEAKK 243
>gi|347300255|ref|NP_001231435.1| DAZ-associated protein 1 [Sus scrofa]
Length = 406
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 222
>gi|148666221|gb|EDK98637.1| mCG119114, isoform CRA_a [Mus musculus]
Length = 357
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 8/185 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 65 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 124
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 125 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 184
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 185 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 243
Query: 190 VRGAG 194
G G
Sbjct: 244 RSGRG 248
>gi|395831307|ref|XP_003788744.1| PREDICTED: DAZ-associated protein 1 [Otolemur garnettii]
Length = 407
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 109/220 (49%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-------------------VNPLKCKIFVGGLTTEI 112
+LA+ H + + IDPK T R N KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 222
>gi|321463296|gb|EFX74313.1| hypothetical protein DAPPUDRAFT_307331 [Daphnia pulex]
Length = 393
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G++ + + DP T +SRGF FVTY VD+ A
Sbjct: 44 RKLFIGGLDYRTTDESLKKHFEQWGQIVDVVVMKDPKTRKSRGFGFVTYARAFMVDEAQA 103
Query: 77 AGDHYIGNKKIDPKRVTKR-------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + ++++PKR R + K+FVGGL ++ E+D++ YFS +G I
Sbjct: 104 ARPHRVDGREVEPKRAVPRDLIGKPEASSTVKKLFVGGLRDDVEEEDLQKYFSTFGPIAS 163
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+K N K+GF F+ FDD + D+V+ + G+ +DVK+
Sbjct: 164 VNVVTEKETNKKRGFAFVEFDDYDPVDKVVLIRDHTVKGRHLDVKK 209
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+KLFVGGL + E+++ YFS +G + S+++ + T + RGFAFV + VD ++
Sbjct: 135 KKLFVGGLRDDVEEEDLQKYFSTFGPIASVNVVTEKETNKKRGFAFVEFDDYDPVDKVVL 194
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKCK 102
DH + + +D K+ + + K K
Sbjct: 195 IRDHTVKGRHLDVKKAISKADMDKMK 220
>gi|25470886|ref|NP_061832.2| DAZ-associated protein 1 isoform b [Homo sapiens]
gi|297702955|ref|XP_002828422.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Pongo abelii]
gi|402903559|ref|XP_003914631.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Papio anubis]
gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|15082313|gb|AAH12062.1| DAZ associated protein 1 [Homo sapiens]
gi|119589907|gb|EAW69501.1| DAZ associated protein 1, isoform CRA_a [Homo sapiens]
gi|167774089|gb|ABZ92479.1| DAZ associated protein 1 [synthetic construct]
gi|261859284|dbj|BAI46164.1| DAZ associated protein 1 [synthetic construct]
gi|380811694|gb|AFE77722.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|383417483|gb|AFH31955.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|384942228|gb|AFI34719.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|410225570|gb|JAA10004.1| DAZ associated protein 1 [Pan troglodytes]
gi|410225572|gb|JAA10005.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256494|gb|JAA16214.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256496|gb|JAA16215.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298126|gb|JAA27663.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298128|gb|JAA27664.1| DAZ associated protein 1 [Pan troglodytes]
Length = 407
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 222
>gi|444723183|gb|ELW63844.1| RNA-binding protein Musashi like protein 1 [Tupaia chinensis]
Length = 324
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 17/221 (7%)
Query: 30 EKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDP 89
K + +YF Q+G V+ + DP T +SRGF FVT+ Q VD +LA H + +K IDP
Sbjct: 27 RKGLREYFGQFGHVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDP 86
Query: 90 K-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGF 144
K R ++ KIFVGGL+ T DV+ YF Q+G + + FDK+ N +GF
Sbjct: 87 KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVDDVKQYFEQFGKVDDAMLMFDKTTNRHRGF 146
Query: 145 CFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAAY 204
F++F+ +++ ++V + I K V+ K+ + P+ + S +G+ RG + A+
Sbjct: 147 GFVTFESEDIVEKVCEIHFHEINNKMVECKKAQ--PKEVMSPTGSARGRSRVMPYGMDAF 204
Query: 205 AAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
G ++ YP G+ A Y + +Y PGY Y
Sbjct: 205 MLGIG-MLGYP----GFQATTY-----ASRSYTGLAPGYTY 235
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT ++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 103 KKIFVGGLSVNTTVDDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 162
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 163 IHFHEINNKMVECKK 177
>gi|426386459|ref|XP_004059702.1| PREDICTED: DAZ-associated protein 1 [Gorilla gorilla gorilla]
Length = 407
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 111/220 (50%), Gaps = 25/220 (11%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVKFNPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
VKR + P S + GA G+R V +A +A P
Sbjct: 185 VKRAE--PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 222
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+DE+ KLFVGGL T ++ + YF +YGEV + + +G+SRGF FVT++ V
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVP 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVN--PLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +F+++G
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E +D+ K +GF F+SF+D++ D+ + + GK+V++KR +
Sbjct: 129 VMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAE 179
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+DE+ KLFVGGL T ++ + YF +YGEV + + +G+SRGF FVT++ V
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVP 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVN--PLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +F+++G
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E +D+ K +GF F+SF+D++ D+ + + GK+V++KR +
Sbjct: 129 VMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAE 179
>gi|310792726|gb|EFQ28187.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 445
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 101/179 (56%), Gaps = 3/179 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTV-NIVMVK 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H++ K IDPKR R K KIFVGG++ E T+Q+ +DYF+Q+G + + DK
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGAR 196
+GF F++F+ + D L + I GK ++VK+ + A RG R
Sbjct: 120 TGRPRGFGFVTFESEAGVDACLSTSLE-IHGKPIEVKKAQPRGNLREEEEAARRGGKFR 177
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + T ++E DYF+Q+G V ++ D TG+ RGF FVT+ ++ VD L+
Sbjct: 84 KIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLST 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
G K I+ K+ R N
Sbjct: 144 SLEIHG-KPIEVKKAQPRGN 162
>gi|395816803|ref|XP_003781879.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Otolemur
garnettii]
Length = 532
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 92/146 (63%), Gaps = 3/146 (2%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL +T ++++ +Y S++GEV IK DP +G+SRGF FV + +VD +L
Sbjct: 111 KMFIGGLSWDTSKRDLTEYLSRFGEVVDCIIKTDPVSGRSRGFGFVLFKDAASVDKVLEL 170
Query: 78 GDHYIGNKKIDPKRV--TKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+H + K IDP+R K P K K+FVGGL+ + +++ ++DYF +G I + P D
Sbjct: 171 KEHKLDGKLIDPQRAKPLKEKEPPK-KVFVGGLSPDTSKEQIKDYFGAFGEIENIELPRD 229
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKN 161
+ N ++GFCF+++ + ++L++
Sbjct: 230 RKTNERRGFCFVTYTEGEPVKKLLES 255
>gi|395843943|ref|XP_003794730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Otolemur garnettii]
Length = 251
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 97/182 (53%), Gaps = 7/182 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ALPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +VK+ G +G
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKXXXXXXCSGRFTGF 214
Query: 190 VR 191
VR
Sbjct: 215 VR 216
>gi|350406107|ref|XP_003487656.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
impatiens]
Length = 426
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+DE+ KLFVGGL T ++ + YF +YGEV + + +G+SRGF FVT++ V
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVP 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVN--PLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +F+++G
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E +D+ K +GF F+SF+D++ D+ + + GK+V++KR +
Sbjct: 129 VMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAE 179
>gi|432854564|ref|XP_004067963.1| PREDICTED: DAZ-associated protein 1-like isoform 2 [Oryzias
latipes]
Length = 435
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + +YFSQYGEV I D T QSRGF FV + V +L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC-----------------KIFVGGLTTEITEQDVRD 119
H + + IDPK T R + P K KIFVGG+ E ++RD
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPELRD 131
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFN 179
YF+++G +TE +D K +GF FI+F+ + DQ + I GK+V+VK+ +
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 180 PETMGSVSGAVRGAGARVSSAGAAYAAAPGR 210
G + A + SA + A P +
Sbjct: 192 DSKAPGQLGPGQWAPRAILSAANGWTAQPAQ 222
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ N GE E+ DYF+++G V + + D + RGF F+T+ +++VD
Sbjct: 110 NKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQ 169
Query: 74 LLAAGDHYIGNKKIDPKRVTKR 95
+ H I KK++ K+ R
Sbjct: 170 AVNMHFHDIMGKKVEVKKAEPR 191
>gi|149241445|ref|XP_001526315.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450438|gb|EDK44694.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 548
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 99/162 (61%), Gaps = 2/162 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ +T E+ + ++F +YGEV +I D TG+SRGF F+T+ +VD +
Sbjct: 202 DSGKMFIGGLNWDTTEEGLAEHFRKYGEVVDYTIMKDNATGRSRGFGFLTFKDPASVDAV 261
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ +H + K IDPKR R + + KIFVGG+ +TE++ ++FS++GSI + Q
Sbjct: 262 IKE-EHILDGKLIDPKRAIAREDQDRVGKIFVGGIDPMVTEREFNEFFSKFGSIIDCQLM 320
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK +GF FI++D + D+V N + GK ++VKR
Sbjct: 321 IDKDTGRSRGFGFITYDSPDAVDKVCVNKYLTLKGKAMEVKR 362
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ E+E N++FS++G + + D TG+SRGF F+TY + AVD +
Sbjct: 289 KIFVGGIDPMVTEREFNEFFSKFGSIIDCQLMIDKDTGRSRGFGFITYDSPDAVDKVCVN 348
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 349 KYLTLKGKAMEVKRAAPR 366
>gi|355564741|gb|EHH21241.1| hypothetical protein EGK_04258 [Macaca mulatta]
Length = 324
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 115/227 (50%), Gaps = 24/227 (10%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-- 90
+ +YF Q+GEV+ + DP T +SRGF FVT+ Q VD +LA H + +K IDPK
Sbjct: 17 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 76
Query: 91 ---RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
R ++ KIFVGGL+ T +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 77 FPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFV 136
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVKRVKF---------NPETMGSVSGAVRGAGARVS 198
+F+ +++ ++V + I K V RV++ P+ + S +G+ RG +
Sbjct: 137 TFESEDIVEKVCEIHFHEINNKMVRWDRVQWLTPVECKKAQPKEVMSPTGSARGRSRVMP 196
Query: 199 SAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATAYPGYDY 245
A+ G ++ YP G+ A Y + +Y PGY Y
Sbjct: 197 YGMDAFMLGIG-MLGYP----GFQATTY-----ASRSYTGLAPGYTY 233
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+V+ + D T + RGF FVT+ ++ V+ +
Sbjct: 90 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 149
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKCK 102
H I NK + RV + + P++CK
Sbjct: 150 IHFHEINNKMVRWDRV-QWLTPVECK 174
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 115 QDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ +R+YF Q+G + E D +GF F++F DQ D+VL + + K +D K
Sbjct: 15 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 74
>gi|327274637|ref|XP_003222083.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Anolis carolinensis]
Length = 349
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 17 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDSAMA 76
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYFS+YG I
Sbjct: 77 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFSEYGKIDT 136
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 137 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 195
Query: 190 VRGAGA 195
G G
Sbjct: 196 RSGRGG 201
>gi|320588554|gb|EFX01022.1| heterogeneous nuclear ribonucleoprotein hrp1 [Grosmannia clavigera
kw1407]
Length = 524
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 98/161 (60%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 42 KMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKTV-NIVMV 100
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+HY+ K IDPKR R K KIFVGG++ E T+Q+ ++YF+Q+G + + DK
Sbjct: 101 KEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDK 160
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+ + + L + I GK ++VK+ +
Sbjct: 161 DTGRPRGFGFLTFESEAGVEACLSTELE-IHGKAIEVKKAQ 200
>gi|432854562|ref|XP_004067962.1| PREDICTED: DAZ-associated protein 1-like isoform 1 [Oryzias
latipes]
Length = 404
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + +YFSQYGEV I D T QSRGF FV + V +L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC-----------------KIFVGGLTTEITEQDVRD 119
H + + IDPK T R + P K KIFVGG+ E ++RD
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKSRTKEGWKGSKADSNKSKKIFVGGIPHNCGEPELRD 131
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFN 179
YF+++G +TE +D K +GF FI+F+ + DQ + I GK+V+VK+ +
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 180 PETMGSVSGAVRGAGARVSSAGAAYAAAPGR 210
G + A + SA + A P +
Sbjct: 192 DSKAPGQLGPGQWAPRAILSAANGWTAQPAQ 222
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ N GE E+ DYF+++G V + + D + RGF F+T+ +++VD
Sbjct: 110 NKSKKIFVGGIPHNCGEPELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQ 169
Query: 74 LLAAGDHYIGNKKIDPKRVTKR 95
+ H I KK++ K+ R
Sbjct: 170 AVNMHFHDIMGKKVEVKKAEPR 191
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 101/167 (60%), Gaps = 3/167 (1%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ K+F+GGL+ T ++ + +YFSQ+GEV ++ D TG+SRGF F+T+ K V
Sbjct: 96 GTKEDGKMFIGGLNWETTDESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTV 155
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+ ++ +H + K IDPKR R + KIFVGG++ + TE D +++F ++G + +
Sbjct: 156 NTVMVK-EHQLDGKLIDPKRAIPRDEQERTAKIFVGGVSQDATESDFKEFFMKFGRVLDA 214
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++FD+ ++ L+ P ++ GK ++VKR +
Sbjct: 215 TLMMDKDTGRPRGFGFVTFDNDLAVERTLEGPLSIL-GKPIEVKRAQ 260
>gi|410348704|gb|JAA40956.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348708|gb|JAA40958.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348710|gb|JAA40959.1| DAZ associated protein 1 [Pan troglodytes]
Length = 427
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 97/185 (52%), Gaps = 19/185 (10%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V
Sbjct: 5 GADEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV 64
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEI 112
+LA+ H + + IDPK T R + P + KIFVGG+
Sbjct: 65 GTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNC 124
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
E ++R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+
Sbjct: 125 GETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184
Query: 173 VKRVK 177
VKR +
Sbjct: 185 VKRAE 189
>gi|164661105|ref|XP_001731675.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
gi|159105576|gb|EDP44461.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
Length = 367
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL+ +T E+ + YF Q+G V S ++ D +G+SRGFAFVT++ K+V+ ++
Sbjct: 1 MFVGGLNWDTDEESLRRYFGQFGPVTSCTVMRDGASGRSRGFAFVTFSDPKSVNAVMVR- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H++ K IDPKR R K K FVGGL +T+ + F Q+G + + DK
Sbjct: 60 EHFLDGKIIDPKRAIPRPEQSKTQKCFVGGLPQTVTQDSFKQLFQQFGHVLDSTVMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F++ + + L + ++ GK+++VKR +
Sbjct: 120 TGRPRGFGFVTFENDDGVENTLAHQPLLLDGKQIEVKRAQ 159
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
P ++ +K FVGGL + + F Q+G V ++ D TG+ RGF FVT+
Sbjct: 77 PEQSKTQKCFVGGLPQTVTQDSFKQLFQQFGHVLDSTVMMDKDTGRPRGFGFVTFENDDG 136
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNP 98
V++ LA + K+I+ KR R P
Sbjct: 137 VENTLAHQPLLLDGKQIEVKRAQSRGQP 164
>gi|301776334|ref|XP_002923590.1| PREDICTED: DAZ-associated protein 1-like [Ailuropoda melanoleuca]
Length = 441
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 108/214 (50%), Gaps = 25/214 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 45 KLFVGGLDWSTTQETLRGYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 104
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDVR 118
H + + IDPK T R + P + KIFVGG+ E ++R
Sbjct: 105 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 164
Query: 119 DYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKF 178
+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 165 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE- 223
Query: 179 NPETMGSVSGAVRGA---GAR-VSSAGAAYAAAP 208
P S + GA G+R V +A +A P
Sbjct: 224 -PRDSKSQAPGQPGASQWGSRVVPNAANGWAGQP 256
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 84 NKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKG 143
+ ++P V + + + K+FVGGL T++ +R YFSQYG + + DK+ N +G
Sbjct: 27 KRGLEPGLVRRVPSSISGKLFVGGLDWSTTQETLRGYFSQYGEVVDCVIMKDKTTNQSRG 86
Query: 144 FCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
F F+ F D N VL + + G+ +D K
Sbjct: 87 FGFVKFKDPNCVGTVLASRPHTLDGRNIDPK 117
>gi|443897375|dbj|GAC74716.1| nuclear porin [Pseudozyma antarctica T-34]
Length = 694
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 102/186 (54%), Gaps = 18/186 (9%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
+E K+FVGGL+ +T E + YFSQ+GEV ++ D TG+SRGFAF+ + KAV+ +
Sbjct: 264 EEGKMFVGGLNWDTTEDSLRRYFSQFGEVGHCTVMRDANTGRSRGFAFLNFVDPKAVNTV 323
Query: 75 LAAGDHYIGNKKIDPKRVTKRVN---------------PLKCKIFVGGLTTEITEQDVRD 119
+ +HY+ K IDPKR R K+FVGGL +T + R
Sbjct: 324 MVR-EHYLDGKVIDPKRAIPRPQQSHHGLGGGFGAGQPAANQKLFVGGLPASVTPESFRT 382
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV--K 177
+F Q+G+++E D+ +GF F+++ D +++L + GKEVDVKR K
Sbjct: 383 FFEQFGTLSECTCMMDRETGRPRGFGFLTYADDASLERILSANPIMFDGKEVDVKRAQSK 442
Query: 178 FNPETM 183
+P+++
Sbjct: 443 NDPQSL 448
>gi|326479392|gb|EGE03402.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton equinum
CBS 127.97]
Length = 493
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 98/163 (60%), Gaps = 6/163 (3%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + +YFSQ+GEV ++ D +G+SRGF F+T+T K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK- 59
Query: 79 DHYIGNK---KIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
+HY+ K KIDPKR R + KIFVGG++ E TEQ+ + +F Q+G + +
Sbjct: 60 EHYLDGKILYKIDPKRAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMI 119
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++FD + + L P + I GK ++VK+ +
Sbjct: 120 DKDTGRPRGFGFVTFDSEAAVEATLSVPLE-IHGKAIEVKKAQ 161
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E+E +F Q+G V ++ D TG+ RGF FVT+ ++ AV+ L+
Sbjct: 87 KIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSV 146
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
I K I+ K+ R N
Sbjct: 147 -PLEIHGKAIEVKKAQPRGN 165
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F ++G++ + + DP T +SRGF F+TY+ VD+
Sbjct: 27 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQK 86
Query: 77 AGDHYIGNKKIDPKRVTKRVN-------PLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R + K+FVG L + EQ +RDYF YGSI +
Sbjct: 87 ARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVD 146
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D+V+ + + GK VDVK+
Sbjct: 147 INIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKK 192
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F ++GE+ + + DP T +SRGF F+TY+ VDD
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K+FVGGL + E+D+R YF YGSI
Sbjct: 77 ARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINS 136
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D++ I GK VDVK+
Sbjct: 137 ISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKK 182
>gi|358396002|gb|EHK45389.1| hypothetical protein TRIATDRAFT_131648 [Trichoderma atroviride IMI
206040]
Length = 405
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV ++ D +G+SRGF F+T+ K V +++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDAKTV-NIVMVK 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H++ K IDPKR R K KIFVGG++ + T+Q+ R+YF+Q+G + + DK
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+ + D + P + I GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFESEAGVDACINVPLE-IHGKPIEVKKAQ 158
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ ++T ++E +YF+Q+G V ++ D TG+ RGF FVT+ ++ VD +
Sbjct: 84 KIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACINV 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
I K I+ K+ R N
Sbjct: 144 -PLEIHGKPIEVKKAQPRGN 162
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 7/186 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F Q+G++ + DP T +SRGF FVTY+ + VD ++
Sbjct: 27 RKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 86
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF YG I
Sbjct: 87 ARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFQSYGKIET 146
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +VK+ E + +
Sbjct: 147 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQTASAQR 206
Query: 190 VRGAGA 195
RG G
Sbjct: 207 GRGGGG 212
>gi|289739881|gb|ADD18688.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 422
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVQH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L +G H + + IDPK R P K K+F+GGL + +TE D+R +F +YG +T
Sbjct: 64 VLQSGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F ++GE+ + + DP T +SRGF F+TY+ VDD
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K+FVGGL + E+D+R YF YGSI
Sbjct: 77 ARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINS 136
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D++ I GK VDVK+
Sbjct: 137 ISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKK 182
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T + + YFS+YGEV + + TG+SRGF FVT+ + V+ L
Sbjct: 19 KLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 78
Query: 78 GDHYIGNKKIDPKRVTKRVN--PLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
G H + + IDPK R P + K+F+GGL ITE D+R +F +YG++ E
Sbjct: 79 GPHTLDGRTIDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGTVMEVV 138
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+D+ K +GF F+SF++++ ++ + I GK+V+VK+ +
Sbjct: 139 IMYDQEKKKSRGFGFLSFENESAVERATTDHFVHISGKQVEVKKAE 184
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG V + I D +SRGF F+++ + AV+ A
Sbjct: 109 KVFLGGLPPNITETDLRSFFCRYGTVMEVVIMYDQEKKKSRGFGFLSFENESAVE--RAT 166
Query: 78 GDHY--IGNKKIDPKRVTKR 95
DH+ I K+++ K+ R
Sbjct: 167 TDHFVHISGKQVEVKKAEPR 186
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 6/166 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ + YF +YGEV + + TG+SRGF FVT+ VD L
Sbjct: 19 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRALEN 78
Query: 78 GDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
G H + + IDPK R P + K+F+GGL ITE D+R +FS+YG++ E
Sbjct: 79 GPHTLDGRTIDPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEVV 138
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+D+ K +GF F+SF+++ ++ I GK+V++K+ +
Sbjct: 139 IMYDQEKKKSRGFGFLSFENEPAVERATAEHFVNISGKQVEIKKAE 184
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +FS+YG V + I D +SRGF F+++ + AV+ A
Sbjct: 109 KVFLGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPAVE--RAT 166
Query: 78 GDHY--IGNKKIDPKRVTKR 95
+H+ I K+++ K+ R
Sbjct: 167 AEHFVNISGKQVEIKKAEPR 186
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F ++GE+ + + DP T +SRGF F+TY+ VDD
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K+FVGGL + E+D+R YF YGSI
Sbjct: 77 ARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINS 136
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D++ I GK VDVK+
Sbjct: 137 ISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKK 182
>gi|358056795|dbj|GAA97145.1| hypothetical protein E5Q_03820 [Mixia osmundae IAM 14324]
Length = 2950
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 109/204 (53%), Gaps = 23/204 (11%)
Query: 7 GTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
G P +E K+F+GGL+ T ++ + YF+++G+V I DP TG+SRGFAF+++
Sbjct: 1795 GHTDPQEFEEGKMFIGGLNWETTDEALWSYFARFGKVTQSQIMRDPNTGRSRGFAFLSFD 1854
Query: 67 TQKAVDDLLAAGDHYIGNKKIDPKRVTKRV-----------------NPL-----KCKIF 104
+VD++L DH++ NK IDPKR R NP+ + K+F
Sbjct: 1855 NSASVDEVLRQ-DHWLDNKNIDPKRAIPRPGAPRSSAGVRPPETRPNNPVPNSNEETKLF 1913
Query: 105 VGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQ 164
V G+ T+Q D+F+++G + FD++ + +G+ F+++ D ++ D VL+
Sbjct: 1914 VRGVPQGATQQHFYDHFAKFGPMESCVLMFDRTTGLNRGYGFVTYVDPSINDDVLRAVPH 1973
Query: 165 VICGKEVDVKRVKFNPETMGSVSG 188
+ G +DVKR P++ +G
Sbjct: 1974 EVLGSHIDVKRSIARPQSGAQSAG 1997
>gi|357628443|gb|EHJ77777.1| hypothetical protein KGM_04418 [Danaus plexippus]
Length = 414
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+DE+ KLFVGGL T ++ + YFS+YG+V + + +G+SRGF FVT+ V+
Sbjct: 9 DDEKGKLFVGGLSWETSQENLQRYFSRYGDVIDCVVMKNSESGRSRGFGFVTFAEPSLVN 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + ITE D+R +F +YG
Sbjct: 69 VVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNITETDLRVFFGRYGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E +D+ K +GF F+SF+D+ ++V + + GK+V++KR +
Sbjct: 129 VMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAE 179
>gi|89271354|emb|CAJ83458.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 347
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 78 GDHYIGNKKIDPKRVTKR--------------------VNPLKCKIFVGGLTTEITEQDV 117
H + + IDPK T R N KIFVGG+ E ++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETEL 130
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 131 REYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 10 GPGRNDER--KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
GP + R K+FVGG+ N GE E+ +YF ++G V + + D + RGF F+T+
Sbjct: 105 GPRTENSRSNKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFED 164
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVTKR 95
+++VD + H I KK++ KR R
Sbjct: 165 EQSVDQAVNMHFHDIMGKKVEVKRAEPR 192
>gi|312377573|gb|EFR24379.1| hypothetical protein AND_11086 [Anopheles darlingi]
Length = 405
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 6/166 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T + + YFS+YGEV + + TG+SRGF FVT+ + VD L
Sbjct: 13 KLFVGGLSWETTHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVDRALEN 72
Query: 78 GDHYIGNKKIDPKRVTKRVN--PLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
G H + + IDPK R P + K+F+GGL ITE D+R +F +YG++ E
Sbjct: 73 GPHTLDGRTIDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGNVMEVV 132
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+D+ K +GF F+SF+++ ++ + I GK+V+VK+ +
Sbjct: 133 IMYDQEKKKSRGFGFLSFENEVAVERATTDHFVHISGKQVEVKKAE 178
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG V + I D +SRGF F+++ + AV+ A
Sbjct: 103 KVFLGGLPPNITETDLRSFFCRYGNVMEVVIMYDQEKKKSRGFGFLSFENEVAVE--RAT 160
Query: 78 GDHY--IGNKKIDPKRVTKR 95
DH+ I K+++ K+ R
Sbjct: 161 TDHFVHISGKQVEVKKAEPR 180
>gi|395519835|ref|XP_003764047.1| PREDICTED: uncharacterized protein LOC100918877 [Sarcophilus
harrisii]
Length = 495
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 149 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 208
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 209 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 268
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 269 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 314
>gi|195117176|ref|XP_002003125.1| GI24040 [Drosophila mojavensis]
gi|193913700|gb|EDW12567.1| GI24040 [Drosophila mojavensis]
Length = 423
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPGNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L +G H + + IDPK R P K K+F+GGL + +TE D+R +F +YG +T
Sbjct: 64 VLQSGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF+++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEEASVEHVTNERYINLNGKQVEIKKAE 172
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEEASVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|17136728|ref|NP_476869.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|24582366|ref|NP_723228.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|24582368|ref|NP_723229.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|281364530|ref|NP_001162897.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|281364532|ref|NP_001162898.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|386769237|ref|NP_001245917.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|386769239|ref|NP_001245918.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|386769241|ref|NP_001245919.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
gi|76803817|sp|P48809.2|RB27C_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 27C;
Short=Hrb27-C; AltName: Full=HRP48.1; AltName:
Full=hnRNP 48
gi|7297190|gb|AAF52456.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform A
[Drosophila melanogaster]
gi|7297191|gb|AAF52457.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform B
[Drosophila melanogaster]
gi|17862734|gb|AAL39844.1| LD46853p [Drosophila melanogaster]
gi|21711665|gb|AAM75023.1| GH26816p [Drosophila melanogaster]
gi|22945819|gb|AAN10605.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform C
[Drosophila melanogaster]
gi|66804007|gb|AAY56657.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
gi|272406922|gb|ACZ94188.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform D
[Drosophila melanogaster]
gi|272406923|gb|ACZ94189.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform E
[Drosophila melanogaster]
gi|383291369|gb|AFH03591.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform F
[Drosophila melanogaster]
gi|383291370|gb|AFH03592.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform G
[Drosophila melanogaster]
gi|383291371|gb|AFH03593.1| heterogeneous nuclear ribonucleoprotein at 27C, isoform H
[Drosophila melanogaster]
Length = 421
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F++YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F++YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|71895177|ref|NP_001026424.1| heterogeneous nuclear ribonucleoprotein A1 [Gallus gallus]
gi|53130302|emb|CAG31480.1| hypothetical protein RCJMB04_6o1 [Gallus gallus]
Length = 368
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 98/182 (53%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY++ + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S +
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASAS 192
Query: 190 VR 191
R
Sbjct: 193 QR 194
>gi|429892778|gb|AGA18934.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F++YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F++YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|417409751|gb|JAA51367.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 328
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 8/185 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 36 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 95
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 96 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 155
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 156 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 214
Query: 190 VRGAG 194
G G
Sbjct: 215 RSGRG 219
>gi|417410136|gb|JAA51545.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 368
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 8/185 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 36 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 95
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 96 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 155
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 156 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 214
Query: 190 VRGAG 194
G G
Sbjct: 215 RSGRG 219
>gi|390331824|ref|XP_003723360.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Strongylocentrotus purpuratus]
Length = 360
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 100/169 (59%), Gaps = 17/169 (10%)
Query: 16 ERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLL 75
ERKLF+GGL NT E I +YF Q+GE+ + DP + +S+GF FVT+ ++K V+ ++
Sbjct: 12 ERKLFLGGLSYNTKEDNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFASRKEVNKVM 71
Query: 76 AA---GDHYIGNKKIDPKRVTKR-----VNP-LKCKIFVGGLTTEITEQDVRDYFSQYGS 126
A H + N+ +D +R R NP KC FVGG+ E TE+++R YFSQ+G
Sbjct: 72 GARKENPHRLDNRAVDVRRAMARDEKGPKNPSFKC--FVGGIPKETTEEELRAYFSQFGQ 129
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
I E + ++ KGF FI++DD + DQ++ I GK+V+ K+
Sbjct: 130 IVEL------ALHLSKGFSFITYDDTDCVDQIVMKKFHHINGKKVEGKK 172
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
A GP +N K FVGG+ + T E+E+ YFSQ+G++ +++ S+GF+F+T
Sbjct: 93 ARDEKGP-KNPSFKCFVGGIPKETTEEELRAYFSQFGQIVELALH------LSKGFSFIT 145
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKR 91
Y VD ++ H+I KK++ K+
Sbjct: 146 YDDTDCVDQIVMKKFHHINGKKVEGKK 172
>gi|195438186|ref|XP_002067018.1| GK24781 [Drosophila willistoni]
gi|194163103|gb|EDW78004.1| GK24781 [Drosophila willistoni]
Length = 422
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F +YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|194217163|ref|XP_001500456.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2-like, partial [Equus caballus]
Length = 323
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 15/212 (7%)
Query: 28 TGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKI 87
T + DYFS++GE+ + DP T +SRGF FVT+ +VD +L H + +K I
Sbjct: 27 TSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTI 86
Query: 88 DPK-RVTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKK 142
DPK +R P KIFVGGL+ +DV+ YF Q+G + + FDK+ N +
Sbjct: 87 DPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHR 146
Query: 143 GFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGAR 196
GF F++F++++V ++V + N K V C K+ K V F P T G G A
Sbjct: 147 GFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRARGLPYTMDAF 205
Query: 197 VSSAGAAYAAAPGRVVAYPSTYAGYAAADYGY 228
+ G P V Y Y G+A + YGY
Sbjct: 206 M--LGMGMLGYPNFVATYGRGYPGFAPS-YGY 234
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 105 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 164
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 165 IHFHEINNKMVECKKAQPK 183
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 109 TTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICG 168
+++ + +RDYFS++G I E D + +GF F++F D D+VL P +
Sbjct: 24 SSQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDS 83
Query: 169 KEVDVK 174
K +D K
Sbjct: 84 KTIDPK 89
>gi|194760296|ref|XP_001962377.1| GF15435 [Drosophila ananassae]
gi|190616074|gb|EDV31598.1| GF15435 [Drosophila ananassae]
Length = 421
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F +YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|125984017|ref|XP_001355773.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
gi|54644090|gb|EAL32832.1| GA10287 [Drosophila pseudoobscura pseudoobscura]
Length = 421
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F +YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 97/162 (59%), Gaps = 3/162 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+F+GGL+ T ++ + DYFS +GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 14 RKMFIGGLNWETTDQSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKDPKTV-NIVM 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+HY+ K IDPKR R K KIFVGG++ E T+ + R+YF+Q+G + + D
Sbjct: 73 VKEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMD 132
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
K +GF F++F+ + + L + I GK ++VK+ +
Sbjct: 133 KDTGRPRGFGFVTFESEAGVEACLSANLE-IHGKPIEVKKAQ 173
>gi|195052284|ref|XP_001993272.1| GH13720 [Drosophila grimshawi]
gi|193900331|gb|EDV99197.1| GH13720 [Drosophila grimshawi]
Length = 421
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPANVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F +YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|194862724|ref|XP_001970091.1| GG10443 [Drosophila erecta]
gi|195471631|ref|XP_002088106.1| GE14209 [Drosophila yakuba]
gi|190661958|gb|EDV59150.1| GG10443 [Drosophila erecta]
gi|194174207|gb|EDW87818.1| GE14209 [Drosophila yakuba]
Length = 421
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F +YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|357619642|gb|EHJ72132.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 307
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +++ Q+G++ + + DP T +SRGF F+TY+ VDD
Sbjct: 24 RKLFIGGLDYCTTDTSLKEFYEQWGDIVDVVVMKDPQTKRSRGFGFITYSRAHMVDDAQK 83
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
H I + ++PKR R + K+F+GG+ +I E+D+R+YFS++G I
Sbjct: 84 NRPHKIDGRIVEPKRAVPREEIKRPDASATVKKLFIGGIKQDIEEEDLREYFSKFGEIIS 143
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+K K+GF FI FDD + D++ P + G+ +DVK+
Sbjct: 144 VSLVTEKDTGKKRGFGFIEFDDYDPVDRICLQPSHKVKGRRLDVKK 189
>gi|429892776|gb|AGA18933.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F++YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F++YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|196001955|ref|XP_002110845.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
gi|190586796|gb|EDV26849.1| hypothetical protein TRIADDRAFT_54175 [Trichoplax adhaerens]
Length = 310
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+FVGGLH +T + +F++YG V IK DP T +SRGF FVT+ V+
Sbjct: 5 NDTGKIFVGGLHPDTDSDSMKKFFNKYGNVSDCVIKKDPVTQRSRGFGFVTFEDPGCVNS 64
Query: 74 LLAAGDHYIGNKKIDPKRVTKRVNPL---------KCKIFVGGLTTEITEQDVRDYFSQY 124
+L AG H + K+IDPK ++ P K+F+GG+ +E +++ YFS +
Sbjct: 65 VLNAGPHLLDGKQIDPKPAVQKGQPAPQASPSNVNTNKVFIGGVAQNTSEDEIKKYFSSF 124
Query: 125 GSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
G + Q +DK+ +GF F++F++ + I GK V+VK
Sbjct: 125 GQVKNVQLMYDKTTKRMRGFGFVTFENDETVKKTCGVHFHNINGKSVEVK 174
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A P + K+F+GG+ +NT E EI YFS +G+V+++ + D T + RGF FVT+
Sbjct: 93 ASPSNVNTNKVFIGGVAQNTSEDEIKKYFSSFGQVKNVQLMYDKTTKRMRGFGFVTFEND 152
Query: 69 KAVDDLLAAGDHYIGNKKIDPKRVTKR 95
+ V H I K ++ K R
Sbjct: 153 ETVKKTCGVHFHNINGKSVEVKLAEDR 179
>gi|115629158|ref|XP_779906.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like isoform 1 [Strongylocentrotus purpuratus]
Length = 360
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 100/169 (59%), Gaps = 17/169 (10%)
Query: 16 ERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLL 75
ERKLF+GGL NT E I +YF Q+GE+ + DP + +S+GF FVT+ ++K V+ ++
Sbjct: 12 ERKLFLGGLSYNTKEDNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFASRKEVNKVM 71
Query: 76 AA---GDHYIGNKKIDPKRVTKR-----VNP-LKCKIFVGGLTTEITEQDVRDYFSQYGS 126
A H + N+ +D +R R NP KC FVGG+ E TE+++R YFSQ+G
Sbjct: 72 GARKENPHRLDNRAVDVRRAMARDEKGPKNPSFKC--FVGGIPKETTEEELRAYFSQFGQ 129
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
I E + ++ KGF FI++DD + DQ++ I GK+V+ K+
Sbjct: 130 IVEL------ALHLSKGFSFITYDDTDCVDQIVMKKFHHINGKKVEGKK 172
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
A GP +N K FVGG+ + T E+E+ YFSQ+G++ +++ S+GF+F+T
Sbjct: 93 ARDEKGP-KNPSFKCFVGGIPKETTEEELRAYFSQFGQIVELALH------LSKGFSFIT 145
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKR 91
Y VD ++ H+I KK++ K+
Sbjct: 146 YDDTDCVDQIVMKKFHHINGKKVEGKK 172
>gi|429892780|gb|AGA18935.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 421
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F++YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F++YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 79 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 138
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 139 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 198
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 199 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 244
>gi|195338791|ref|XP_002036007.1| GM16252 [Drosophila sechellia]
gi|195577167|ref|XP_002078444.1| Hrb27C [Drosophila simulans]
gi|194129887|gb|EDW51930.1| GM16252 [Drosophila sechellia]
gi|194190453|gb|EDX04029.1| Hrb27C [Drosophila simulans]
Length = 421
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F +YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F ++G++ + + DP T +SRGF F+TY+ VD+
Sbjct: 27 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQK 86
Query: 77 AGDHYIGNKKIDPKRVTKR-------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K+FVG L + EQ +RDYF YGSI +
Sbjct: 87 ARPHKIDGRVVEPKRAVPRQEIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVD 146
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D+V+ + + GK VDVK+
Sbjct: 147 INIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKK 192
>gi|380017405|ref|XP_003692647.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
florea]
Length = 439
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 100/171 (58%), Gaps = 7/171 (4%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+DE+ KLFVGGL T ++ + YF +YGEV + + +G+SRGF FVT++ V
Sbjct: 9 DDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVP 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVN--PLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +F+++G
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ E +D+ K +GF F+SF+D++ D+ + + GK+V++KR +
Sbjct: 129 VMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQVEIKRAE 179
>gi|66804019|gb|AAY56658.1| heterogeneous nuclear ribonucleoprotein [Drosophila simulans]
Length = 421
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F +YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFGRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFGRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|429892772|gb|AGA18931.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 3 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 62
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F++YG +T
Sbjct: 63 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVT 122
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 123 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 171
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F++YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 96 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 155
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 156 RYINLNGKQVEIKKAEPR 173
>gi|440474936|gb|ELQ43651.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
Y34]
gi|440479945|gb|ELQ60674.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
P131]
Length = 632
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 98/161 (60%), Gaps = 3/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 184 KMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTV-NIVMV 242
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+HY+ K IDPKR R K KIFVGG++ E T+Q+ +D+F+Q+G + + DK
Sbjct: 243 KEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDK 302
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+ + + L + I GK ++VK+ +
Sbjct: 303 DTGRPRGFGFVTFESEAGVEACLARDLE-IHGKLIEVKKAQ 342
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 6/165 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF +G V + I DP T +SRGF F+T+ +VD +L
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 78 GDHYIGNKKIDPKRVT-----KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + KKIDPK T K+ N K KIFVGG++ + + +V+ YF+Q+G + E
Sbjct: 122 PIHTLDGKKIDPKHATPKNRAKQANRTK-KIFVGGVSQDTSSDEVKAYFNQFGKVEETVM 180
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ +GF F++F++++V D+V + I K+V+ K+ +
Sbjct: 181 LMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ 225
>gi|321265756|ref|XP_003197594.1| subunit of cleavage factor I; Hrp1p [Cryptococcus gattii WM276]
gi|317464074|gb|ADV25807.1| Subunit of cleavage factor I, putative; Hrp1p [Cryptococcus gattii
WM276]
Length = 477
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 101/176 (57%), Gaps = 3/176 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
DE K+F+GGL+ T E +++Y Q+GE+++ +I DP +G+SRGFAF+TY +V +
Sbjct: 110 DEGKMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDP-SGRSRGFAFLTYRDPASVTKV 168
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+A H++ K+IDPKR R + K+FVGGL +T + ++ + Q+G + +
Sbjct: 169 MAQ-THHLDGKQIDPKRAIPRAEHERTAKVFVGGLAPSVTGESLKSFLCQFGQVMDATVM 227
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
FDK KGF F +F D+ + + + GK++++K+ + GS GA
Sbjct: 228 FDKETGRSKGFAFATFQDEESVGRAMAASGVELEGKQIEIKKAQPRGTAQGSKFGA 283
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 79 DHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI---TEFQQPFD 135
D G ++ R+ P + K+F+GGL E TE + +Y Q+G I T + P
Sbjct: 90 DSNFGQQQDGQDRIKPSDMPDEGKMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDPSG 149
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
+S +GF F+++ D +V+ + GK++D KR
Sbjct: 150 RS----RGFAFLTYRDPASVTKVMAQTHH-LDGKQIDPKRA 185
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQYGEV ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E T+ + R+YF+Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+ + D L + I GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFESEAGVDACL-SANLEIHGKPIEVKKAQ 158
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + T + E +YF+Q+G V ++ D TG+ RGF FVT+ ++ VD L+A
Sbjct: 84 KIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVDACLSA 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+ I K I+ K+ R N
Sbjct: 144 -NLEIHGKPIEVKKAQPRGN 162
>gi|238880917|gb|EEQ44555.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 475
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 2/161 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK F+GGL +T E+ + +F +YG + +I D TG+SRGF F+T+ K+VD LL
Sbjct: 162 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 221
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
H + K IDPKR + + K KIFVGG+ +TE++ ++FSQ+G I + Q D
Sbjct: 222 -DRHVLDGKLIDPKRAISKEDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMID 280
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
K +GF F+++D D+V N + GK ++VKR
Sbjct: 281 KDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRA 321
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ E+E +++FSQ+G++ + D TG+SRGF FVTY + AVD +
Sbjct: 247 KIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVN 306
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 307 KYLTLKGKAMEVKRAAPR 324
>gi|348564390|ref|XP_003467988.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cavia porcellus]
Length = 383
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 51 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 110
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 111 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 170
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 171 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 229
Query: 190 VRGAGA 195
G G
Sbjct: 230 RSGRGG 235
>gi|429892784|gb|AGA18937.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 3 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 62
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F++YG +T
Sbjct: 63 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVT 122
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 123 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 171
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F++YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 96 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 155
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 156 RYINLNGKQVEIKKAEPR 173
>gi|308465164|ref|XP_003094843.1| CRE-HRP-1 protein [Caenorhabditis remanei]
gi|308246407|gb|EFO90359.1| CRE-HRP-1 protein [Caenorhabditis remanei]
Length = 344
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+FVGGL NT ++ + +++SQ+GE+ I + DP T +SRGF FVT+T + VD +
Sbjct: 23 RKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTAKTEVDAAMK 82
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKC-------KIFVGGLTTEITEQDVRDYFSQYGSITE 129
H I K +DPKR R + + +++V G+ + E + DYFS+YG++T+
Sbjct: 83 QRPHVIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHNEDMLTDYFSKYGNVTK 142
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ DK+ +GF F++FDD + DQ + ++ G DV++
Sbjct: 143 SEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
>gi|410980705|ref|XP_003996716.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Felis catus]
Length = 333
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-R 91
+ DYFS++GE+ + DP T +SRGF FVT+ +VD +L H + +K IDPK
Sbjct: 24 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVA 83
Query: 92 VTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
+R P KIFVGGL+ +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 84 FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFV 143
Query: 148 SFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAG 201
+F++++V ++V + N K V C K+ K V F P T G G A + G
Sbjct: 144 TFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRARGLPYTMDAFM--LG 200
Query: 202 AAYAAAPGRVVAYPSTYAGYAAADYGY 228
P V Y Y G+A + YGY
Sbjct: 201 MGMLGYPNFVATYGRGYPGFAPS-YGY 226
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 97 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 156
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 157 IHFHEINNKMVECKKAQPK 175
>gi|197101465|ref|NP_001127331.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pongo abelii]
gi|75070806|sp|Q5RBU8.1|ROA2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|55728019|emb|CAH90762.1| hypothetical protein [Pongo abelii]
Length = 353
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 140
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 141 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHTINGHNAEVRKA-LSRQEMQEVQSS 199
Query: 190 VRGAGA 195
G G
Sbjct: 200 RSGRGG 205
>gi|390331826|ref|XP_003723361.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Strongylocentrotus purpuratus]
Length = 330
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 100/169 (59%), Gaps = 17/169 (10%)
Query: 16 ERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLL 75
ERKLF+GGL NT E I +YF Q+GE+ + DP + +S+GF FVT+ ++K V+ ++
Sbjct: 21 ERKLFLGGLSYNTKEDNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFASRKEVNKVM 80
Query: 76 AAGD---HYIGNKKIDPKRVTKR-----VNP-LKCKIFVGGLTTEITEQDVRDYFSQYGS 126
A H + N+ +D +R R NP KC FVGG+ E TE+++R YFSQ+G
Sbjct: 81 GARKENPHRLDNRAVDVRRAMARDEKGPKNPSFKC--FVGGIPKETTEEELRAYFSQFGQ 138
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
I E + ++ KGF FI++DD + DQ++ I GK+V+ K+
Sbjct: 139 IVEL------ALHLSKGFSFITYDDTDCVDQIVMKKFHHINGKKVEGKK 181
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
A GP +N K FVGG+ + T E+E+ YFSQ+G++ +++ S+GF+F+T
Sbjct: 102 ARDEKGP-KNPSFKCFVGGIPKETTEEELRAYFSQFGQIVELALH------LSKGFSFIT 154
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKR 91
Y VD ++ H+I KK++ K+
Sbjct: 155 YDDTDCVDQIVMKKFHHINGKKVEGKK 181
>gi|68465675|ref|XP_723199.1| likely RNA binding protein [Candida albicans SC5314]
gi|68465968|ref|XP_723052.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445066|gb|EAL04337.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445222|gb|EAL04492.1| likely RNA binding protein [Candida albicans SC5314]
Length = 475
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 2/161 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK F+GGL +T E+ + +F +YG + +I D TG+SRGF F+T+ K+VD LL
Sbjct: 162 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 221
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
H + K IDPKR + + K KIFVGG+ +TE++ ++FSQ+G I + Q D
Sbjct: 222 -DRHVLDGKLIDPKRAISKEDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMID 280
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
K +GF F+++D D+V N + GK ++VKR
Sbjct: 281 KDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKRA 321
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ E+E +++FSQ+G++ + D TG+SRGF FVTY + AVD +
Sbjct: 247 KIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVN 306
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 307 KYLTLKGKAMEVKRAAPR 324
>gi|11042|emb|CAA44505.1| hrp48.1 [Drosophila melanogaster]
Length = 385
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 63
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F++YG +T
Sbjct: 64 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVT 123
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 172
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F++YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 157 RYINLNGKQVEIKKAEPR 174
>gi|74204146|dbj|BAE39838.1| unnamed protein product [Mus musculus]
Length = 320
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASSG 192
Query: 190 VR 191
R
Sbjct: 193 QR 194
>gi|392332125|ref|XP_001081205.3| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 295
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-R 91
+ DYFS++GE+ + DP T +SRGF FVT+ +VD +L H + +K IDPK
Sbjct: 4 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVA 63
Query: 92 VTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
+R P KIFVGGL+ +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 64 FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFV 123
Query: 148 SFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAG 201
+F++++V ++V + N K V C K+ K V F P T G G A + G
Sbjct: 124 TFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRARGLPYTMDAFM--LG 180
Query: 202 AAYAAAPGRVVAYPSTYAGYAAADYGY 228
P V Y Y G+A + YGY
Sbjct: 181 MGMLGYPNFVATYGRGYPGFAPS-YGY 206
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 77 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 136
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 137 IHFHEINNKMVECKKAQPK 155
>gi|308477515|ref|XP_003100971.1| CRE-SQD-1 protein [Caenorhabditis remanei]
gi|308264315|gb|EFP08268.1| CRE-SQD-1 protein [Caenorhabditis remanei]
Length = 334
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 126/250 (50%), Gaps = 29/250 (11%)
Query: 4 RANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFV 63
+ NG + G N+++K+FVGG+ ++++ +F+QYGEV +K D G+SRGFAFV
Sbjct: 17 KENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFV 75
Query: 64 TYTTQKAVDDLLAAGDHYIGNK----------KIDPKRVTK--------RVNPLKC---- 101
+TT + LAA + I K K+ R+ K V P K
Sbjct: 76 EFTTGEGCKLALAAREQTIKGKSVSINFFLISKLKKNRLFKCFKFVFKVEVKPAKSRENK 135
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+FVGGL ++ +EQ++R +F Q+G + + + PFDK ++ F FI F+++ AD+
Sbjct: 136 KVFVGGLPSDYSEQELRSHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQ 195
Query: 162 PKQVICGKEVDVKRV----KFNPETMGSVSGAVRGAGARVSSAGAAYAAAPGRVVAYPST 217
KQ +E DVK+ K P G + G G R + A + A G++ A P
Sbjct: 196 TKQTFGTRECDVKKAVPQGKRFPGAQGRIPGGRGMYGGRGGNNNAGWYAGWGQIGAMP-- 253
Query: 218 YAGYAAADYG 227
Y A A +G
Sbjct: 254 YGAAATAGWG 263
>gi|291389294|ref|XP_002711081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Oryctolagus
cuniculus]
Length = 371
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|344285367|ref|XP_003414433.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Loxodonta
africana]
Length = 520
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-- 90
+ DYFS++GE+ + DP T +SRGF FVT+ +VD +L H + +K IDPK
Sbjct: 82 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVA 141
Query: 91 ---RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
R ++ KIFVGGL+ +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 142 FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFV 201
Query: 148 SFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAG 201
+F++++V ++V + N K V C K+ K V F P T G G A + G
Sbjct: 202 TFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRARGLPYTMDAFM--LG 258
Query: 202 AAYAAAPGRVVAYPSTYAGYAAADYGY 228
P V Y Y G+A + YGY
Sbjct: 259 MGMLGYPNFVATYGRGYPGFAPS-YGY 284
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 155 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 214
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 215 IHFHEINNKMVECKKAQPK 233
>gi|392351488|ref|XP_340877.5| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 463
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-R 91
+ DYFS++GE+ + DP T +SRGF FVT+ +VD +L H + +K IDPK
Sbjct: 154 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVA 213
Query: 92 VTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
+R P KIFVGGL+ +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 214 FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFV 273
Query: 148 SFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAG 201
+F++++V ++V + N K V C K+ K V F P T G G A + G
Sbjct: 274 TFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRARGLPYTMDAFM--LG 330
Query: 202 AAYAAAPGRVVAYPSTYAGYAAADYGY 228
P V Y Y G+A + YGY
Sbjct: 331 MGMLGYPNFVATYGRGYPGFAPS-YGY 356
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 227 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 286
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 287 IHFHEINNKMVECKKAQPK 305
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 110 TEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGK 169
+++ +RDYFS++G I E D + +GF F++F D D+VL P + K
Sbjct: 147 SDVPADSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSK 206
Query: 170 EVDVK 174
+D K
Sbjct: 207 TIDPK 211
>gi|169613076|ref|XP_001799955.1| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
gi|160702644|gb|EAT82933.2| hypothetical protein SNOG_09668 [Phaeosphaeria nodorum SN15]
Length = 453
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 31 KEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK 90
+ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V+ ++ +HY+ K IDPK
Sbjct: 40 ESLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCVNTVMVK-EHYLDGKIIDPK 98
Query: 91 RVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISF 149
R R + KIFVGG++ E TE+D ++F +G + + DK +GF F++F
Sbjct: 99 RAIPREEQERTSKIFVGGVSQEATEEDFTNFFKSFGRVVDATLMMDKETGRPRGFGFVTF 158
Query: 150 DDQNVADQVLKNPKQVICGKEVDVKRVK 177
D D L+ P Q++ GK ++VKR +
Sbjct: 159 DGDAAVDATLRQPLQIL-GKPIEVKRAQ 185
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E++ ++F +G V ++ D TG+ RGF FVT+ AVD L
Sbjct: 111 KIFVGGVSQEATEEDFTNFFKSFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLRQ 170
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+G K I+ KR R N
Sbjct: 171 PLQILG-KPIEVKRAQPRGN 189
>gi|452981460|gb|EME81220.1| hypothetical protein MYCFIDRAFT_211785, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 353
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 3/167 (1%)
Query: 12 GRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAV 71
G ++ K+F+GGL+ T ++ + YFSQ+GEV ++ D TG+SRGF F+T+ K V
Sbjct: 98 GIKEDGKMFIGGLNWETTDESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNV 157
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+ ++ +H + K IDPKR R + KIFVGG++ E TE D +D+F ++G + +
Sbjct: 158 NTVMVK-EHSLDGKLIDPKRAIPRDEQERTAKIFVGGVSQEATEADFKDFFMKFGRVLDA 216
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++FD + ++ L+ P I GK ++VKR +
Sbjct: 217 TLMMDKDTGRPRGFGFVTFDSELAVERTLEGPL-AILGKPIEVKRAQ 262
>gi|390463506|ref|XP_002748435.2| PREDICTED: RNA-binding protein Musashi homolog 2, partial
[Callithrix jacchus]
Length = 295
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-R 91
+ DYFS++GE+ + DP T +SRGF FVT+ +VD +L H + +K IDPK
Sbjct: 4 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVA 63
Query: 92 VTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
+R P KIFVGGL+ +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 64 FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFV 123
Query: 148 SFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAG 201
+F++++V ++V + N K V C K+ K V F P T G G A + G
Sbjct: 124 TFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRARGLPYTMDAFM--LG 180
Query: 202 AAYAAAPGRVVAYPSTYAGYAAADYGY 228
P V Y Y G+A + YGY
Sbjct: 181 MGMLGYPNFVATYGRGYPGFAPS-YGY 206
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 77 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 136
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 137 IHFHEINNKMVECKKAQPK 155
>gi|380492932|emb|CCF34246.1| nuclear polyadenylated RNA-binding protein [Colletotrichum
higginsianum]
Length = 448
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 97/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTV-NIVMVK 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H++ K IDPKR R K KIFVGG++ E T+Q+ +DYF+Q+G + + DK
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+ + + L + I GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFESEAGVEACLSTSLE-IHGKPIEVKKAQ 158
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + T ++E DYF+Q+G V ++ D TG+ RGF FVT+ ++ V+ L+
Sbjct: 84 KIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLST 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
G K I+ K+ R N
Sbjct: 144 SLEIHG-KPIEVKKAQPRGN 162
>gi|395816795|ref|XP_003781875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Otolemur
garnettii]
Length = 350
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 97/159 (61%), Gaps = 3/159 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL +T ++++ +Y S++GEV IK DP +G+SRGF FV + +VD +L
Sbjct: 83 KMFIGGLSWDTSKRDLTEYLSRFGEVVDCIIKTDPVSGRSRGFGFVLFKDAASVDKVLEL 142
Query: 78 GDHYIGNKKIDPKRVT--KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
+H + K IDP+R K P K K+FVGGL+ + +++ ++DYF +G I + P D
Sbjct: 143 KEHKLDGKLIDPQRAKPLKEKAPPK-KVFVGGLSPDTSKEQIKDYFGAFGEIENIELPRD 201
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ N ++GFCF+++ + ++L++ I + ++K
Sbjct: 202 RKTNERRGFCFVTYTEGEPVKKLLESRYHHIGSGKCEIK 240
>gi|75074832|sp|Q9TTV2.1|ROA2_SAGOE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1; AltName: Full=Vitamin D response
element-binding protein 2; Short=VDRE-BP 2
gi|6273351|gb|AAF06330.1|AF192348_1 vitamin D response element binding protein [Saguinus oedipus]
Length = 341
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF++YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|291394513|ref|XP_002713753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|148683901|gb|EDL15848.1| Musashi homolog 2 (Drosophila), isoform CRA_c [Mus musculus]
Length = 296
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-R 91
+ DYFS++GE+ + DP T +SRGF FVT+ +VD +L H + +K IDPK
Sbjct: 5 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVA 64
Query: 92 VTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
+R P KIFVGGL+ +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 65 FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFV 124
Query: 148 SFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAG 201
+F++++V ++V + N K V C K+ K V F P T G G A + G
Sbjct: 125 TFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRARGLPYTMDAFM--LG 181
Query: 202 AAYAAAPGRVVAYPSTYAGYAAADYGY 228
P V Y Y G+A + YGY
Sbjct: 182 MGMLGYPNFVATYGRGYPGFAPS-YGY 207
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 78 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 137
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 138 IHFHEINNKMVECKKAQPK 156
>gi|158259881|dbj|BAF82118.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 140
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 141 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 199
Query: 190 VRGAGA 195
G G+
Sbjct: 200 RSGRGS 205
>gi|112421201|ref|NP_001036248.1| heterogeneous nuclear ribonucleoprotein A1 [Macaca mulatta]
gi|2500575|sp|Q28521.3|ROA1_MACMU RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|1332379|gb|AAB01436.1| hnRNP A1-gamma isoform [Macaca mulatta]
Length = 320
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD N D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCEVRK 179
>gi|209156106|gb|ACI34285.1| DAZ-associated protein 1 [Salmo salar]
Length = 436
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 106/215 (49%), Gaps = 26/215 (12%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + +YFSQYGEV I D T QSRGF FV + V +L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVRTVLET 71
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC-----------------KIFVGGLTTEITEQDVRD 119
H + + IDPK T R + P K KIFVGG+ E ++R+
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKVRTKDGWKGSKADSNKSKKIFVGGIPHNCGEPELRE 131
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFN 179
YF+++G +TE +D K +GF FI+F+ + DQ + I GK+V+VK+ +
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPR 191
Query: 180 ----PETMGSVSGAVRGAGARVSSAGAAYAAAPGR 210
P +G RG + SA ++A P +
Sbjct: 192 DSNAPGQLGPNQWGPRG----ILSAANGWSAQPAQ 222
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGG+ N GE E+ +YF+++G V + + D + RGF F+T+ +++VD
Sbjct: 110 NKSKKIFVGGIPHNCGEPELREYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQ 169
Query: 74 LLAAGDHYIGNKKIDPKRVTKR 95
+ H I KK++ K+ R
Sbjct: 170 AVNMHFHDIMGKKVEVKKAEPR 191
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ T E + +YFS+YG V + I D TG+SRGF F+++ +VD++
Sbjct: 169 DINKMFIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSFADASSVDEV 228
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR R K KIFVGG+ ++ ++ ++FS++GSI + Q
Sbjct: 229 VKT-QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSEWGSIIDAQLM 287
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF FI++D + D+V +N GK +++KR +
Sbjct: 288 LDKDTGRSRGFGFITYDSPDAVDRVCQNKFIEFKGKRIEIKRAE 331
>gi|221114449|ref|XP_002154409.1| PREDICTED: uncharacterized protein LOC100213955 [Hydra
magnipapillata]
Length = 397
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 103/177 (58%), Gaps = 16/177 (9%)
Query: 16 ERKLFVGGLHR-NTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
ERKLF+GGL++ +T E + +F +YG++ ++I D QSRGF FV + +V+D+
Sbjct: 14 ERKLFIGGLNKYHTDEDRLRKFFCEYGKIVDVTIMRD-NDKQSRGFGFVLFENASSVNDI 72
Query: 75 LA---AG------DHYIGNKKIDPKRV-----TKRVNPLKCKIFVGGLTTEITEQDVRDY 120
+A AG DH I K+ PK T R L K+FVGGL + ITE D+R +
Sbjct: 73 IANKKAGASFELDDHQIEVKRALPKVPGGNAGTSRTGGLYRKVFVGGLPSSITEDDLRSH 132
Query: 121 FSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
F ++G++ E D+ N +GF F++F+D++ AD+ ++ Q IC K ++KR +
Sbjct: 133 FEKFGAVHEVDLLRDRDTNRLRGFAFVTFEDEDSADKCIQKRAQEICKKFCEIKRAQ 189
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+FVGGL + E ++ +F ++G V + + D T + RGFAFVT+ + + D +
Sbjct: 113 RKVFVGGLPSSITEDDLRSHFEKFGAVHEVDLLRDRDTNRLRGFAFVTFEDEDSADKCIQ 172
Query: 77 AGDHYIGNKKIDPKRVTKR 95
I K + KR R
Sbjct: 173 KRAQEICKKFCEIKRAQTR 191
>gi|55742017|ref|NP_001006737.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
gi|49522454|gb|AAH75497.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 92/180 (51%), Gaps = 20/180 (11%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 78 GDHYIGNKKIDPKRVTKR--------------------VNPLKCKIFVGGLTTEITEQDV 117
H + + IDPK T R N KIFVGG+ E ++
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETEL 130
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
R+YF ++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR +
Sbjct: 131 REYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE 190
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 10 GPGRNDER--KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
GP + R K+FVGG+ N GE E+ +YF ++G V + + D + RGF F+T+
Sbjct: 105 GPRTENSRSNKIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFED 164
Query: 68 QKAVDDLLAAGDHYIGNKKIDPKRVTKR 95
+++VD + H I KK++ KR R
Sbjct: 165 EQSVDQAVNMHFHDIMGKKVEVKRAEPR 192
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F ++G++ + + DP T +SRGF F+TY+ VD+
Sbjct: 27 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDEAQK 86
Query: 77 AGDHYIGNKKIDPKRVTKRVN-------PLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R + K+FVG L + EQ +RDYF YG+I +
Sbjct: 87 ARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGNIVD 146
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D+V+ + + GK VDVK+
Sbjct: 147 INIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKK 192
>gi|383856328|ref|XP_003703661.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Megachile
rotundata]
Length = 316
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 6/165 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF +G V + I DP T +SRGF F+T+ +VD +L
Sbjct: 41 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 100
Query: 78 GDHYIGNKKIDPKRVT-----KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + KKIDPK T K+ N K KIFVGG++ + + ++V+ YF+Q+G + E
Sbjct: 101 PIHTLDGKKIDPKHATPKNRAKQANRTK-KIFVGGVSQDTSSEEVKAYFNQFGKVEETVM 159
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ +GF F++F++++V D+V + I K+V+ K+ +
Sbjct: 160 LMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ 204
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 6/166 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ + YF +YGEV + + TG+SRGF FVT+ + V+ L
Sbjct: 20 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 79
Query: 78 GDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
G H + + IDPK R P + K+F+GGL ITE D+R +FS+YG++ E
Sbjct: 80 GPHTLDGRTIDPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEVV 139
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+D+ K +GF F+SF+++ ++ I GK+V++K+ +
Sbjct: 140 IMYDQEKKKSRGFGFLSFENEAAVERATAEHFVNISGKQVEIKKAE 185
>gi|74209393|dbj|BAE23274.1| unnamed protein product [Mus musculus]
Length = 301
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQEYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|198433300|ref|XP_002128655.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A/B
[Ciona intestinalis]
Length = 367
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 96/165 (58%), Gaps = 2/165 (1%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
++E K+FVGGL +T + +YFS++G V+ +IK D T +SRGF FV + + V
Sbjct: 112 EDNELKMFVGGLSWDTETVGLREYFSKFGVVKDCTIKKDSKTERSRGFGFVLFDDAETVK 171
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+L + +HY+ +KIDPK+ + K+FVGG+ + V++YF+QYG I EF++
Sbjct: 172 KVLESENHYLDGRKIDPKKA--QAQRRDGKLFVGGINPDTENDVVKEYFTQYGEIEEFER 229
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
P DK+ +GFCFI++ + Q + G ++DVK +
Sbjct: 230 PVDKNTGKNRGFCFITYKKDGCIKLATASKTQELEGSKIDVKEAQ 274
>gi|345323573|ref|XP_001508014.2| PREDICTED: DAZ-associated protein 1-like [Ornithorhynchus anatinus]
Length = 445
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 50 KLFVGGLDWSTTQETLRSYFSQYGEVIDCVIMKDKTTNQSRGFGFVKFKDPNCVGAVLAS 109
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKC------------------KIFVGGLTTEITEQDVR 118
H + + IDPK T R + P + KIFVGG+ E ++R
Sbjct: 110 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELR 169
Query: 119 DYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+YF ++G ++E +D K +GF FI+F+DQ DQ + I GK+V+VKR +
Sbjct: 170 EYFKKFGVVSEVVMIYDAEKQRPRGFGFITFEDQQSVDQAVNMHFHDIMGKKVEVKRAE 228
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N K+FVGG+ N GE E+ +YF ++G V + + D + RGF F+T+ Q++VD
Sbjct: 149 NKSNKIFVGGIPHNCGETELREYFKKFGVVSEVVMIYDAEKQRPRGFGFITFEDQQSVDQ 208
Query: 74 LLAAGDHYIGNKKIDPKRVTKR 95
+ H I KK++ KR R
Sbjct: 209 AVNMHFHDIMGKKVEVKRAEPR 230
>gi|350580575|ref|XP_003480852.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 349
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLF+GGL T EK + +Y+ Q+G++ + DP +SRGF FVT+++ VD +AA
Sbjct: 22 KLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVLRDPSNKRSRGFGFVTFSSVAEVDAAMAA 81
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
H + K +DPKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 82 RPHSVDGKVVDPKRAVAREESEKPGAHLAVKKLFVGGIKEDTEEHHLRDYFEKYGKIDTI 141
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAV 190
+ D+ K+GF F++FDD + D+++ I G +V + + + M V +
Sbjct: 142 EIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHHAEVGKA-LSRQEMQEVQSST 200
Query: 191 RGAGARV 197
G G +
Sbjct: 201 SGRGGHI 207
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+KLFVGG+ +T E + DYF +YG++++I I D +G+ RGF FVT+ VD ++
Sbjct: 112 KKLFVGGIKEDTEEHHLRDYFEKYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 171
Query: 77 AGDHYI 82
H I
Sbjct: 172 QKYHTI 177
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 89 PKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFIS 148
P + KR+N K+F+GGL + TE+ +R+Y+ Q+G +T+ D S +GF F++
Sbjct: 9 PLKRKKRINEQFHKLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVLRDPSNKRSRGFGFVT 68
Query: 149 FDDQNVADQVLKNPKQVICGKEVDVKR 175
F D + + GK VD KR
Sbjct: 69 FSSVAEVDAAMAARPHSVDGKVVDPKR 95
>gi|219519440|gb|AAI45589.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDGAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|410058693|ref|XP_003951016.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Pan
troglodytes]
gi|119614240|gb|EAW93834.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_a [Homo
sapiens]
Length = 301
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|393235474|gb|EJD43029.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 351
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 99/157 (63%), Gaps = 3/157 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL+ +T ++ + +YFSQ+G+V++ +I D TG+SRGFAF+T+ AV+ ++
Sbjct: 1 MFVGGLNWDTSDEGLRNYFSQFGKVDACTIMRD-QTGRSRGFAFLTFEDPAAVNAVMVR- 58
Query: 79 DHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R + K+FVGGL +T + +R YF+Q+G + + D+
Sbjct: 59 EHYLDGKIIDPKRAIPRQEHHRTQKLFVGGLAPTVTTESLRAYFAQFGKVVDATVMVDRD 118
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ KGF F++F+D + +++L I GK +DVK
Sbjct: 119 SSRSKGFGFVTFEDIDNIERLLGLGHLEIDGKMIDVK 155
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+KLFVGGL + + YF+Q+G+V ++ D + +S+GF FVT+ ++ LL
Sbjct: 82 QKLFVGGLAPTVTTESLRAYFAQFGKVVDATVMVDRDSSRSKGFGFVTFEDIDNIERLLG 141
Query: 77 AGDHYIGNKKIDPKRVTKR 95
G I K ID K R
Sbjct: 142 LGHLEIDGKMIDVKLAQPR 160
>gi|71896753|ref|NP_001026156.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Gallus gallus]
gi|53127438|emb|CAG31102.1| hypothetical protein RCJMB04_2g17 [Gallus gallus]
Length = 349
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 17 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 76
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 77 ARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 136
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 137 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQNS 195
Query: 190 VRGAGA 195
G G
Sbjct: 196 RSGRGG 201
>gi|3329498|gb|AAC26867.1| heterogenous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|326921905|ref|XP_003207194.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Meleagris gallopavo]
Length = 362
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 30 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 89
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 90 ARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 149
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 150 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQNS 208
Query: 190 VRGAGA 195
G G
Sbjct: 209 RSGRGG 214
>gi|4504447|ref|NP_002128.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Homo
sapiens]
gi|114051756|ref|NP_001039440.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|73976082|ref|XP_863847.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 3
[Canis lupus familiaris]
gi|332242620|ref|XP_003270483.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Nomascus leucogenys]
gi|332864909|ref|XP_003318407.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan troglodytes]
gi|338724111|ref|XP_003364873.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Equus caballus]
gi|350595419|ref|XP_003484106.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Sus scrofa]
gi|390466619|ref|XP_003733620.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Callithrix jacchus]
gi|397472888|ref|XP_003807964.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan paniscus]
gi|402863875|ref|XP_003896219.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Papio anubis]
gi|403287969|ref|XP_003935191.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410952506|ref|XP_003982920.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Felis catus]
gi|426355697|ref|XP_004045246.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Gorilla gorilla gorilla]
gi|122145945|sp|Q2HJ60.1|ROA2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337449|gb|AAA36574.1| hnRNP A2 protein [Homo sapiens]
gi|500638|gb|AAB60650.1| hnRNP protein A2 [Homo sapiens]
gi|565644|dbj|BAA06032.1| hnRNP A2 protein [Homo sapiens]
gi|87578315|gb|AAI13299.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Bos taurus]
gi|119614241|gb|EAW93835.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|119614242|gb|EAW93836.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|149033380|gb|EDL88181.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|149033381|gb|EDL88182.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|296488431|tpg|DAA30544.1| TPA: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|387542842|gb|AFJ72048.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Macaca
mulatta]
gi|410225452|gb|JAA09945.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343561|gb|JAA40594.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343565|gb|JAA40596.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343567|gb|JAA40597.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343569|gb|JAA40598.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|456753293|gb|JAA74140.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Sus scrofa]
Length = 341
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|109134362|ref|NP_058086.2| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1 [Mus
musculus]
gi|309267107|ref|XP_001473875.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Mus musculus]
gi|21071091|gb|AAK98601.2| heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
gi|148666222|gb|EDK98638.1| mCG119114, isoform CRA_b [Mus musculus]
gi|148666223|gb|EDK98639.1| mCG119114, isoform CRA_b [Mus musculus]
Length = 341
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|32880197|ref|NP_872591.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2 [Mus
musculus]
gi|26354140|dbj|BAC40700.1| unnamed protein product [Mus musculus]
gi|223461557|gb|AAI41254.1| Hnrnpa2b1 protein [Mus musculus]
Length = 301
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|449273028|gb|EMC82657.1| DAZ-associated protein 1, partial [Columba livia]
Length = 395
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 105/211 (49%), Gaps = 22/211 (10%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLK---------------CKIFVGGLTTEITEQDVRDYF 121
H + + IDPK T R + P + C + G+ E ++R+YF
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWVRKDTWCSCDFIINGIPHNCGETELREYF 120
Query: 122 SQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
++G +TE +D K +GF FI+F+D+ DQ + I GK+V+VKR + P
Sbjct: 121 KKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE--PR 178
Query: 182 TMGSVSGAVRGA---GARV-SSAGAAYAAAP 208
S + GA G+R+ SA +A P
Sbjct: 179 DSKSQTPGPAGASQWGSRIMPSAANGWAGQP 209
>gi|187956922|gb|AAI58075.1| EG627828 protein [Mus musculus]
gi|187956950|gb|AAI57905.1| EG627828 protein [Mus musculus]
gi|219521461|gb|AAI72011.1| EG627828 protein [Mus musculus]
Length = 351
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A + + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPYKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +VK+ E + S
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMRSAGSQR 192
Query: 190 VRGAGA 195
RG G+
Sbjct: 193 DRGGGS 198
>gi|440899276|gb|ELR50605.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 339
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 7 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 66
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 67 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 126
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 127 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 185
Query: 190 VRGAGA 195
G G
Sbjct: 186 RSGRGG 191
>gi|343961425|dbj|BAK62302.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pan troglodytes]
Length = 301
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|291394515|ref|XP_002713754.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|58262530|ref|XP_568675.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134119022|ref|XP_772014.1| hypothetical protein CNBN1910 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254618|gb|EAL17367.1| hypothetical protein CNBN1910 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230849|gb|AAW47158.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 480
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 97/164 (59%), Gaps = 3/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
DE K+F+GGL+ T E +++Y Q+GE+++ +I DP +G+SRGFAF+TY +V +
Sbjct: 110 DEGKMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDP-SGRSRGFAFLTYRDPASVTKV 168
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+A H++ K+IDPKR R + K+FVGGL +T + ++ + Q+G + +
Sbjct: 169 MAQ-THHLDGKQIDPKRAIPRAEHERTAKVFVGGLAPSVTGESLKSFLCQFGQVMDATVM 227
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
FDK KGF F +F D+ + + + GK++++K+ +
Sbjct: 228 FDKETGRSKGFAFATFQDEESVGRAMAASGVELEGKQIEIKKAQ 271
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 79 DHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI---TEFQQPFD 135
D+ G ++ R+ P + K+F+GGL E TE + +Y Q+G I T + P
Sbjct: 90 DNNFGQQQDGQDRIKPSDMPDEGKMFIGGLNWETTEAGLSEYMGQFGEIDACTIMRDPSG 149
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
+S +GF F+++ D +V+ + GK++D KR
Sbjct: 150 RS----RGFAFLTYRDPASVTKVMAQTHH-LDGKQIDPKRA 185
>gi|241953399|ref|XP_002419421.1| cleavage and polyadenylation factor CF I component, putative;
nuclear polyadenylated RNA-binding protein, putative
[Candida dubliniensis CD36]
gi|223642761|emb|CAX43015.1| cleavage and polyadenylation factor CF I component, putative
[Candida dubliniensis CD36]
Length = 505
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK F+GGL +T E+ + +F +YG + +I D TG+SRGF F+T+ K+VD LL
Sbjct: 186 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 245
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFD 135
H + K IDPKR + + K KIFVGG+ +TE++ ++FSQ+G I + Q D
Sbjct: 246 -DRHVLDGKLIDPKRAISKEDQEKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMID 304
Query: 136 KSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
K +GF F+++D D+V N + GK ++VKR
Sbjct: 305 KDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLKGKAMEVKR 344
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ E+E +++FSQ+G++ + D TG+SRGF FVTY + AVD +
Sbjct: 271 KIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDKVCVN 330
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K ++ KR R
Sbjct: 331 KYLTLKGKAMEVKRAAPR 348
>gi|158296251|ref|XP_001688945.1| AGAP006656-PB [Anopheles gambiae str. PEST]
gi|157016421|gb|EDO63951.1| AGAP006656-PB [Anopheles gambiae str. PEST]
Length = 327
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 5/150 (3%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-R 91
+ DYFS++GE+ + + DP T +SRGF F+T+ +VD +LA G H + KKIDPK
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVA 61
Query: 92 VTKRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
+R +P KIFVGGL+ T +DV+ YF Q+G I + FDK N +GF F+
Sbjct: 62 FPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFV 121
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+F ++V D+V + I K V+ K+ +
Sbjct: 122 TFQSEDVVDKVCEIHFHEINNKMVECKKAQ 151
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL T +++ YF Q+G +E + D T + RGF FVT+ ++ VD +
Sbjct: 75 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 134
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I NK ++ K+ +
Sbjct: 135 IHFHEINNKMVECKKAQPK 153
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEVKK 178
>gi|196010301|ref|XP_002115015.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
gi|190582398|gb|EDV22471.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
Length = 210
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 6/203 (2%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL T +++ +YF +YGE+ I +DP T +SRGF FVT+T V+ +L +
Sbjct: 5 KMFIGGLSWMTNTEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTDADNVEKVLQS 64
Query: 78 GDHYIGNKKID-----PKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
G H + +K ID PK+ +++ K+FVGG+ T T +D+ YF +G I +
Sbjct: 65 GPHKLDDKNIDAKVAYPKKQRQKLVTRTKKVFVGGIATNTTTEDITKYFETFGQIEDAML 124
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRG 192
FDKS +GF F+ F+ ++ AD+ + I K+V+VK+ + E M S + +G
Sbjct: 125 MFDKSTQRHRGFGFVIFESEDSADKACEVHFHEINNKKVEVKKAQ-PKEVMHSQTSGTKG 183
Query: 193 AGARVSSAGAAYAAAPGRVVAYP 215
+ G + ++ P
Sbjct: 184 HLKTNHNRGIRKLSCSSYTISVP 206
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGG+ NT ++I YF +G++E + D T + RGF FV + ++ + D
Sbjct: 93 KKVFVGGIATNTTTEDITKYFETFGQIEDAMLMFDKSTQRHRGFGFVIFESEDSADKACE 152
Query: 77 AGDHYIGNKKIDPKR 91
H I NKK++ K+
Sbjct: 153 VHFHEINNKKVEVKK 167
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ T E + DYF++YG V + I D TG+SRGF F+T+ +VD++
Sbjct: 162 DSCKMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTFENASSVDEV 221
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR R K KIFVGG+ ++ ++ ++F+QYG+I + Q
Sbjct: 222 VKT-QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGADVRPKEFEEFFAQYGTIIDAQLM 280
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F+++D + D+V ++ GK++++KR +
Sbjct: 281 LDKDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQIEIKRAE 324
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 90 KRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISF 149
++V ++ CK+F+GGL E TE +RDYF++YGS+ E + D + +GF F++F
Sbjct: 153 RKVKADLSKDSCKMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTF 212
Query: 150 DDQNVADQVLKNPKQVICGKEVDVKR 175
++ + D+V+K + ++ GK +D KR
Sbjct: 213 ENASSVDEVVKT-QHILDGKVIDPKR 237
>gi|157059863|dbj|BAF79677.1| heterogeneous nuclear ribonucleoprotein B0a [Rattus norvegicus]
Length = 301
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|14043072|ref|NP_112533.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Homo
sapiens]
gi|388452958|ref|NP_001252700.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Macaca mulatta]
gi|73976084|ref|XP_532495.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Canis lupus familiaris]
gi|194209740|ref|XP_001498416.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Equus caballus]
gi|296209404|ref|XP_002751505.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Callithrix jacchus]
gi|301754131|ref|XP_002912905.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ailuropoda melanoleuca]
gi|332242622|ref|XP_003270484.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Nomascus leucogenys]
gi|332864911|ref|XP_519003.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan troglodytes]
gi|335305558|ref|XP_003134901.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Sus scrofa]
gi|395830927|ref|XP_003788564.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Otolemur
garnettii]
gi|397472890|ref|XP_003807965.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan paniscus]
gi|402863877|ref|XP_003896220.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Papio anubis]
gi|403287971|ref|XP_003935192.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410952508|ref|XP_003982921.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Felis catus]
gi|426227786|ref|XP_004007996.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Ovis
aries]
gi|426355699|ref|XP_004045247.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Gorilla gorilla gorilla]
gi|133257|sp|P22626.2|ROA2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337453|gb|AAA60271.1| hnRNP B1 protein [Homo sapiens]
gi|565643|dbj|BAA06031.1| hnRNP B1 protein [Homo sapiens]
gi|119614243|gb|EAW93837.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|119614245|gb|EAW93839.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|387542844|gb|AFJ72049.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Macaca
mulatta]
gi|410225454|gb|JAA09946.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343563|gb|JAA40595.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
Length = 353
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 140
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 141 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 199
Query: 190 VRGAGA 195
G G
Sbjct: 200 RSGRGG 205
>gi|124028629|sp|O88569.2|ROA2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|23266713|gb|AAN16352.1|AF452567_1 heterogeneous nuclear ribonucleoprotein A2/B1/B0 [Mus musculus]
Length = 353
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 140
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 141 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 199
Query: 190 VRGAGA 195
G G
Sbjct: 200 RSGRGG 205
>gi|157059859|dbj|BAF79675.1| heterogeneous nuclear ribonucleoprotein A2 [Rattus norvegicus]
Length = 341
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|353230165|emb|CCD76336.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 346
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 95/169 (56%), Gaps = 7/169 (4%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
ND K+F+GGL T + + DYF +YGE+ I DP T +SRGF F+T++ V+
Sbjct: 75 NDPGKMFIGGLSPTTTSEGLRDYFQKYGELREYMIMRDPLTKRSRGFGFITFSDPVCVEK 134
Query: 74 LLAAGDHYIGNKKIDPKRVTKR-------VNPLKCKIFVGGLTTEITEQDVRDYFSQYGS 126
+L H + KKIDPK R V+ ++F+GG+ T+ T +++ +YFSQ+G
Sbjct: 135 VLETAPHILDYKKIDPKLAVPRKSGQNTKVSTKTKRVFIGGVATQTTNEELSEYFSQFGK 194
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ + DKS N +GF F++F+ + A++V + + K V+ K+
Sbjct: 195 LESCELMMDKSTNRHRGFGFVTFESEESAEKVCEIHFHDLHNKMVEAKK 243
>gi|354472764|ref|XP_003498607.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cricetulus griseus]
Length = 357
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 25 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 84
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 85 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 144
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 145 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 203
Query: 190 VRGAGA 195
G G
Sbjct: 204 RSGRGG 209
>gi|281349549|gb|EFB25133.1| hypothetical protein PANDA_000670 [Ailuropoda melanoleuca]
Length = 323
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|406601704|emb|CCH46665.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 479
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 99/164 (60%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL +T E+ + +YFS++GEV +I + TG+SRGF F+T+ ++VD++
Sbjct: 126 DAAKMFIGGLDWDTSEERLKEYFSKFGEVIDHTIMRESSTGRSRGFGFLTFAEPRSVDEV 185
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ +H + K IDPKR R K KIFVGG+ E+ ++ ++F ++G+I + Q
Sbjct: 186 VKT-EHVLDGKVIDPKRAIPRDEQDKTGKIFVGGIAPEVRPKEFENFFGKFGTIIDAQLM 244
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++FD + D+V + G++++VKR +
Sbjct: 245 LDKDTGRSRGFGFVTFDAPDAVDRVCQGRYLDFNGRQIEVKRAE 288
>gi|291401095|ref|XP_002716927.1| PREDICTED: mCG1035404-like isoform 1 [Oryctolagus cuniculus]
Length = 377
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEVKK 200
>gi|351704285|gb|EHB07204.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial
[Heterocephalus glaber]
gi|355560744|gb|EHH17430.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
mulatta]
gi|355747762|gb|EHH52259.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
fascicularis]
Length = 352
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 20 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 79
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 80 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 139
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 140 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 198
Query: 190 VRGAGA 195
G G
Sbjct: 199 RSGRGG 204
>gi|255726600|ref|XP_002548226.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
gi|240134150|gb|EER33705.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
Length = 472
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 2/159 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K F+GGL T E+++ ++FS+YGE+ +I D TG+SRGF F+T+ +VD LL
Sbjct: 144 KTFLGGLDWQTTEEKLVEHFSKYGEIVDYTIMKDNATGRSRGFGFLTFKDPASVDALLK- 202
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR + + K KIF+GG+ +TEQ+ ++FSQ+G I + Q DK
Sbjct: 203 DRHILDGKLIDPKRAISKEDQEKVGKIFIGGIDPMVTEQEFDEFFSQFGKIIDCQLMIDK 262
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+GF FI++D D+V N + GK ++VKR
Sbjct: 263 DTGRSRGFGFITYDSPAAVDRVCVNKYLTLKGKAMEVKR 301
>gi|157059865|dbj|BAF79678.1| heterogeneous nuclear ribonucleoprotein B0b [Rattus norvegicus]
Length = 313
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 140
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D++ I G +V++ + + M V +
Sbjct: 141 IEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 199
Query: 190 VRGAGA 195
G G
Sbjct: 200 RSGRGG 205
>gi|296196619|ref|XP_002745917.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Callithrix jacchus]
Length = 341
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|291394569|ref|XP_002713772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
gi|291397610|ref|XP_002715276.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
Length = 352
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 140
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 141 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 199
Query: 190 VRGAGA 195
G G
Sbjct: 200 RSGRGG 205
>gi|390464603|ref|XP_003733247.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Callithrix jacchus]
Length = 288
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPSAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|344266091|ref|XP_003405114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Loxodonta africana]
Length = 320
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY+T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|85101893|ref|XP_961230.1| hypothetical protein NCU04239 [Neurospora crassa OR74A]
gi|11595517|emb|CAC18311.1| related to heterogeneous nuclear ribonucleoprotein [Neurospora
crassa]
gi|28922772|gb|EAA31994.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 503
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTV-NIVMVK 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E T+ + R+YF+Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+ + + L + I GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFESEAGVEACLSANLE-IHGKPIEVKKAQ 158
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + T + E +YF+Q+G V ++ D TG+ RGF FVT+ ++ V+ L+A
Sbjct: 84 KIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSA 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+ I K I+ K+ R N
Sbjct: 144 -NLEIHGKPIEVKKAQPRGN 162
>gi|444509540|gb|ELV09335.1| DAZ-associated protein 1, partial [Tupaia chinensis]
Length = 391
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 104/196 (53%), Gaps = 11/196 (5%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + YFSQYGEV I D T QSRGF FV + V +LA+
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 78 GDHYI-GNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + G + P+ + N KIFVGG+ E ++R+YF ++G +TE +D
Sbjct: 61 RPHTLDGRNQKGPRSDNSKSN----KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDA 116
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA--- 193
K +GF FI+F+D+ DQ + I GK+V+VKR + P S + GA
Sbjct: 117 EKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAE--PRDSKSQAPGQPGASQW 174
Query: 194 GAR-VSSAGAAYAAAP 208
G+R V SA +A P
Sbjct: 175 GSRVVPSAANGWAGQP 190
>gi|5542530|pdb|2UP1|A Chain A, Structure Of Up1-Telomeric Dna Complex
gi|39654500|pdb|1PO6|A Chain A, Crystal Structure Of Up1 Complexed With
D(Tagg(6mi)ttaggg): A Human Telomeric Repeat Containing
6-Methyl-8-(2-Deoxy-
Beta-Ribofuranosyl)isoxanthopteridine (6mi)
Length = 183
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 7 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 66
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 67 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 126
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVS 187
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 127 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASAS 183
>gi|46137515|ref|XP_390449.1| hypothetical protein FG10273.1 [Gibberella zeae PH-1]
Length = 552
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 101/166 (60%), Gaps = 8/166 (4%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYF+Q+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 122 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTV-NIVMV 180
Query: 78 GDHYIGNK-----KIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
+H++ K +IDPKR R K KIFVGG++ E T+Q+ ++YF+Q+G + +
Sbjct: 181 KEHFLDGKILILLQIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDAT 240
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++F+++ D + P + I GK ++VK+ +
Sbjct: 241 LMMDKDTGRPRGFGFVTFENEAGVDACINVPLE-IHGKPIEVKKAQ 285
>gi|344255674|gb|EGW11778.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Cricetulus griseus]
Length = 340
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|441632410|ref|XP_003252929.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Nomascus leucogenys]
Length = 426
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 67 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 126
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 127 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 186
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 187 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 232
>gi|410036104|ref|XP_525973.4| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Pan
troglodytes]
Length = 371
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 62 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 121
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 122 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 181
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 182 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 227
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 95/176 (53%), Gaps = 6/176 (3%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
A G P + KLFVGGL T +++ +YF+ +G V + I DP T +SRGF F+T
Sbjct: 21 ATGNTSPSPS---KLFVGGLSWQTSSEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFIT 77
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKC---KIFVGGLTTEITEQDVRDYF 121
+ +VD +LA H + K+IDPK T + P KIFVGG+ + + +VR YF
Sbjct: 78 FQEAASVDKVLAVPVHTLDGKRIDPKHATPKSAPKPAKTKKIFVGGVGQDTSADEVRAYF 137
Query: 122 SQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+Q+G++ + D+ +GF F++F + ++V I K+V+ KR +
Sbjct: 138 AQFGAVEDAVMLMDQQTKRHRGFGFVTFHSEEAVERVCDIHFHTIKNKKVECKRAQ 193
>gi|291045424|ref|NP_001166975.1| DAZ associated protein 1 [Danio rerio]
Length = 418
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 93/178 (52%), Gaps = 18/178 (10%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + +YFSQYGEV I D T QSRGF FV + V +L
Sbjct: 24 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 83
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKCK-----------------IFVGGLTTEITEQDVRD 119
H + + IDPK T R + P K + IFVGG+ E ++RD
Sbjct: 84 KPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRD 143
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
YF+++G +TE +D K +GF FI+F+ + DQ + I GK+V+VK+ +
Sbjct: 144 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAE 201
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGG+ N GE E+ DYF+++G V + + D + RGF F+T+ +++VD +
Sbjct: 127 IFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMH 186
Query: 79 DHYIGNKKIDPKRVTKR 95
H I KK++ K+ R
Sbjct: 187 FHDIMGKKVEVKKAEPR 203
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F ++G++ + + DP T +SRGF F+TY+ +D+
Sbjct: 26 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQK 85
Query: 77 AGDHYIGNKKIDPKRVTKRVN-------PLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R + K+FVG L + EQ +RDYF +GSI +
Sbjct: 86 ARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHFGSIVD 145
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D+V+ + + GK VDVK+
Sbjct: 146 INIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKK 191
>gi|426223452|ref|XP_004005889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 8/176 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGS 185
+ D+ K+GF F++FDD + D+++ + G +V++ + E M S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKEEMAS 188
>gi|162462398|ref|NP_001104824.1| hnRNPA/B-like 28 [Bombyx mori]
gi|161334098|gb|ABX60898.1| hnRNPA/B-like protein [Bombyx mori]
Length = 250
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+DE+ KLFVGGL T ++ + YFS+YGEV + + +G+SRGF FVT+ V+
Sbjct: 3 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 62
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +F +YG
Sbjct: 63 LVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGK 122
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
+ E +D+ K +GF F+SF+D+ ++V + + GK+V++KR + P
Sbjct: 123 VMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAE--PRDGSGK 180
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATA 239
G+ G + + Y + A P DY YT GS D Y A
Sbjct: 181 LGSGGGGMGGGAMNASRYGGEYQQPAAQP------PGDDYEYTGGSGDGYQRA 227
>gi|90083957|dbj|BAE90929.1| unnamed protein product [Macaca fascicularis]
Length = 317
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 140
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 141 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 199
Query: 190 VRGAGA 195
G G
Sbjct: 200 RSGRGG 205
>gi|47218115|emb|CAG09987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 419
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 8/178 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +F ++G + + +P +SRGF FVTY++ + VD+ +
Sbjct: 7 RKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPSCKRSRGFGFVTYSSLREVDEAMK 66
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K KIFVGG+ + E +RDYF +YG I
Sbjct: 67 ARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKYGKIEC 126
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVS 187
++S K+GFCF++FDD + D+++ I +V++ + + M ++S
Sbjct: 127 VDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRKA-LSKQEMNAIS 183
>gi|449492608|ref|XP_002192177.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Taeniopygia guttata]
Length = 309
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 17 RKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 76
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 77 ARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 136
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 137 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQNS 195
Query: 190 VRGAGA 195
G G
Sbjct: 196 RSGRGG 201
>gi|157265559|ref|NP_001098083.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Rattus norvegicus]
gi|224493240|sp|A7VJC2.1|ROA2_RAT RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|157059861|dbj|BAF79676.1| heterogeneous nuclear ribonucleoprotein B1 [Rattus norvegicus]
Length = 353
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 140
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D++ I G +V++ + + M V +
Sbjct: 141 IEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 199
Query: 190 VRGAGA 195
G G
Sbjct: 200 RSGRGG 205
>gi|357495375|ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
Length = 479
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 18/180 (10%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
++D KLF+GG+ +T E+ + +YFS YGEV+ I D TG++RGF FV + AV
Sbjct: 2 QSDSGKLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFI-DPAVA 60
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRVN----------------PLKC-KIFVGGLTTEITEQ 115
D++ H I + ++ K+ R + P + KIFVGGL + +TE
Sbjct: 61 DIVVQEKHNIDGRMVEAKKAVPRDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLASTVTES 120
Query: 116 DVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
D + YF Q+G+IT+ +D + +GF FI++D + DQVL + GK V+VKR
Sbjct: 121 DFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMVEVKR 180
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 7 GTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYT 66
G+ GPGR RK+FVGGL E + YF Q+G + + + D T + RGF F+TY
Sbjct: 98 GSPGPGR--TRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 155
Query: 67 TQKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNP 98
+++AVD +L H + K ++ KR V K ++P
Sbjct: 156 SEEAVDQVLLKTFHELNGKMVEVKRAVPKELSP 188
>gi|402908392|ref|XP_003916927.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Papio anubis]
Length = 343
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 6 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 65
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 66 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 125
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 126 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 171
>gi|449268325|gb|EMC79194.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Columba
livia]
Length = 339
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 7 RKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 66
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 67 ARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 126
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 127 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQNS 185
Query: 190 VRGAGA 195
G G
Sbjct: 186 RSGRGG 191
>gi|402908388|ref|XP_003916925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Papio anubis]
gi|402908390|ref|XP_003916926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Papio anubis]
Length = 351
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|344266093|ref|XP_003405115.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Loxodonta africana]
Length = 370
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY+T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|291402431|ref|XP_002717571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RD+F QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|344270293|ref|XP_003406980.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Loxodonta africana]
Length = 365
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 33 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 92
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 93 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 152
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 153 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 211
Query: 190 VRGAGA 195
G G
Sbjct: 212 RSGRGG 217
>gi|359063952|ref|XP_003585907.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 320
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 7/173 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPET 182
+ D+ K+GF F++FDD + D+++ + G +V++ ET
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHSCEVRKALSKQET 186
>gi|291402433|ref|XP_002717572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RD+F QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|291391798|ref|XP_002712349.1| PREDICTED: mCG1035404-like [Oryctolagus cuniculus]
Length = 378
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHSCEVKK 200
>gi|302654951|ref|XP_003019271.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
gi|291182985|gb|EFE38626.1| hypothetical protein TRV_06675 [Trichophyton verrucosum HKI 0517]
Length = 496
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 98/167 (58%), Gaps = 10/167 (5%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + +YFSQ+GEV ++ D +G+SRGF F+T+T K V+ ++
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVK- 59
Query: 79 DHYIGNK-------KIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
+HY+ + KIDPKR R + KIFVGG++ E TEQ+ + +F Q+G + +
Sbjct: 60 EHYLDARSFADQLYKIDPKRAIPRDEQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDA 119
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF F++FD + + L P + I GK ++VK+ +
Sbjct: 120 TLMIDKDTGRPRGFGFVTFDSEAAVEATLSVPLE-IHGKAIEVKKAQ 165
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E+E +F Q+G V ++ D TG+ RGF FVT+ ++ AV+ L+
Sbjct: 91 KIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEATLSV 150
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
I K I+ K+ R N
Sbjct: 151 -PLEIHGKAIEVKKAQPRGN 169
>gi|34785465|gb|AAH57655.1| Hnrpa3 protein, partial [Mus musculus]
Length = 303
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|148683902|gb|EDL15849.1| Musashi homolog 2 (Drosophila), isoform CRA_d [Mus musculus]
Length = 250
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
Query: 33 INDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-- 90
+ DYFS++GE+ + DP T +SRGF FVT+ +VD +L H + +K IDPK
Sbjct: 5 LRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVA 64
Query: 91 ---RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
R ++ KIFVGGL+ +DV+ YF Q+G + + FDK+ N +GF F+
Sbjct: 65 FPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFV 124
Query: 148 SFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAG 201
+F++++V ++V + N K V C K+ K V F P T G G A + G
Sbjct: 125 TFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRARGLPYTMDAFM--LG 181
Query: 202 AAYAAAPGRVVAYPSTYAGYAAADYGY 228
P V Y Y G+A + YGY
Sbjct: 182 MGMLGYPNFVATYGRGYPGFAPS-YGY 207
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 78 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 137
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 138 IHFHEINNKMVECKK 152
>gi|355565001|gb|EHH21490.1| hypothetical protein EGK_04572, partial [Macaca mulatta]
Length = 357
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 97/165 (58%), Gaps = 6/165 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF+ +G V + I DP T +SRGF F+T+ +VD +L
Sbjct: 41 KLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGSVDKVLKC 100
Query: 78 GDHYIGNKKIDPKRVT-----KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + KKIDPK T K+ N K KIFVGG++ + + +V+ YF+Q+G + E
Sbjct: 101 PIHTLDGKKIDPKHATPKNRAKQANRTK-KIFVGGVSQDTSSDEVKAYFNQFGKVEETVM 159
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ +GF F++F++++V D+V + I K+V+ K+ +
Sbjct: 160 LMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ 204
>gi|429892774|gb|AGA18932.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 417
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 97/165 (58%), Gaps = 5/165 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+ +L
Sbjct: 4 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQN 63
Query: 78 GDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
G H + + IDPK R P K K+F+GGL + +TE D+R +F++YG +TE
Sbjct: 64 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVI 123
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 124 MYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 168
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F++YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 93 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 152
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 153 RYINLNGKQVEIKKAEPR 170
>gi|148682805|gb|EDL14752.1| mCG117968 [Mus musculus]
Length = 317
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + + DP T +SRGF FVTY T + VD +
Sbjct: 11 RKLFIGGLSFETTDESLRSHFEQWGTLTNCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 70
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 71 ARPHKVDGRVVEPKRTVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 130
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 131 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 176
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|148695240|gb|EDL27187.1| mCG1305, isoform CRA_a [Mus musculus]
Length = 351
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|397489099|ref|XP_003815574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Pan paniscus]
gi|426337838|ref|XP_004032902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Gorilla gorilla gorilla]
gi|119631468|gb|EAX11063.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|119631470|gb|EAX11065.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|194375464|dbj|BAG56677.1| unnamed protein product [Homo sapiens]
gi|221046256|dbj|BAH14805.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|197098694|ref|NP_001125266.1| heterogeneous nuclear ribonucleoprotein A3 [Pongo abelii]
gi|55727504|emb|CAH90507.1| hypothetical protein [Pongo abelii]
Length = 355
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|75517570|gb|AAI03708.1| HNRPA1 protein [Homo sapiens]
Length = 267
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|126347016|ref|XP_001368514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like, partial
[Monodelphis domestica]
Length = 356
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 11 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 70
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 71 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 130
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 131 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 176
>gi|74141832|dbj|BAE40987.1| unnamed protein product [Mus musculus]
Length = 320
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGEIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|297264391|ref|XP_001096533.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
3 [Macaca mulatta]
Length = 336
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|74004684|ref|XP_543761.2| PREDICTED: uncharacterized protein LOC608074 isoform 2 [Canis lupus
familiaris]
gi|410968904|ref|XP_003990939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Felis catus]
Length = 378
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|74228812|dbj|BAE21894.1| unnamed protein product [Mus musculus]
Length = 379
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|34740329|ref|NP_919223.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|397489097|ref|XP_003815573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Pan paniscus]
gi|426337836|ref|XP_004032901.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Gorilla gorilla gorilla]
gi|51338779|sp|P51991.2|ROA3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|34327775|gb|AAQ63629.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|62822160|gb|AAY14709.1| unknown [Homo sapiens]
gi|85567495|gb|AAI12028.1| Heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|109730489|gb|AAI13471.1| HNRPA3 protein [Homo sapiens]
gi|119631469|gb|EAX11064.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|119631471|gb|EAX11066.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|410261478|gb|JAA18705.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261480|gb|JAA18706.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261482|gb|JAA18707.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261484|gb|JAA18708.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261486|gb|JAA18709.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261488|gb|JAA18710.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261490|gb|JAA18711.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261492|gb|JAA18712.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261494|gb|JAA18713.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351651|gb|JAA42429.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351653|gb|JAA42430.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
Length = 378
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|402888739|ref|XP_003907708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Papio
anubis]
Length = 378
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|348580545|ref|XP_003476039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 355
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAISREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|332209432|ref|XP_003253815.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 378
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|327263824|ref|XP_003216717.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Anolis
carolinensis]
Length = 354
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + ++F Q+G + + DP T +SRGF FVTY+T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|329664164|ref|NP_001192358.1| heterogeneous nuclear ribonucleoprotein A3 [Bos taurus]
gi|426220819|ref|XP_004004609.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Ovis aries]
Length = 380
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|157423039|gb|AAI53535.1| Dazap1 protein [Danio rerio]
Length = 385
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 93/178 (52%), Gaps = 18/178 (10%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + +YFSQYGEV I D T QSRGF FV + V +L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 71
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKCK-----------------IFVGGLTTEITEQDVRD 119
H + + IDPK T R + P K + IFVGG+ E ++RD
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRD 131
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
YF+++G +TE +D K +GF FI+F+ + DQ + I GK+V+VK+ +
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAE 189
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGG+ N GE E+ DYF+++G V + + D + RGF F+T+ +++VD +
Sbjct: 115 IFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMH 174
Query: 79 DHYIGNKKIDPKRVTKR 95
H I KK++ K+ R
Sbjct: 175 FHDIMGKKVEVKKAEPR 191
>gi|148697232|gb|EDL29179.1| mCG1035404 [Mus musculus]
Length = 239
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|31559916|ref|NP_666242.2| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37674277|ref|NP_932758.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37693507|ref|NP_937765.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|162329577|ref|NP_001104764.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|311272700|ref|XP_003133549.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Sus scrofa]
gi|30316201|sp|Q8BG05.1|ROA3_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|51316556|sp|Q6URK4.1|ROA3_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|23274033|gb|AAH23908.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|23468331|gb|AAH38364.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|34327777|gb|AAQ63630.1| heterogeneous nuclear ribonucleoprotein A3 variant a [Rattus
norvegicus]
gi|40787633|gb|AAH64824.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|51980308|gb|AAH81878.1| Heterogeneous nuclear ribonucleoprotein A3 [Rattus norvegicus]
gi|58801248|dbj|BAD89508.1| heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|74143970|dbj|BAE41285.1| unnamed protein product [Mus musculus]
gi|148695241|gb|EDL27188.1| mCG1305, isoform CRA_b [Mus musculus]
gi|149022310|gb|EDL79204.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022311|gb|EDL79205.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022312|gb|EDL79206.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022313|gb|EDL79207.1| rCG27231, isoform CRA_c [Rattus norvegicus]
Length = 379
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|403258685|ref|XP_003921883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|296220327|ref|XP_002756261.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Callithrix jacchus]
Length = 304
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|38328278|gb|AAH62198.1| Hnrpa3 protein [Mus musculus]
Length = 318
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|89130657|gb|AAI14332.1| Dazap1 protein [Danio rerio]
Length = 384
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 93/178 (52%), Gaps = 18/178 (10%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL +T ++ + +YFSQYGEV I D T QSRGF FV + V +L
Sbjct: 12 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDT 71
Query: 78 GDHYIGNKKIDPKRVTKR-VNPLKCK-----------------IFVGGLTTEITEQDVRD 119
H + + IDPK T R + P K + IFVGG+ E ++RD
Sbjct: 72 KPHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRD 131
Query: 120 YFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
YF+++G +TE +D K +GF FI+F+ + DQ + I GK+V+VK+ +
Sbjct: 132 YFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAE 189
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGG+ N GE E+ DYF+++G V + + D + RGF F+T+ +++VD +
Sbjct: 115 IFVGGIPHNCGEAELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMH 174
Query: 79 DHYIGNKKIDPKRVTKR 95
H I KK++ K+ R
Sbjct: 175 FHDIMGKKVEVKKAEPR 191
>gi|214241|gb|AAA49742.1| ribonucleoprotein A1b [Xenopus laevis]
Length = 351
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + ++F Q+G + + DP + +SRGF FVTY + VD +
Sbjct: 14 RKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMT 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +R+YF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++F+D + D+++ + V++ + + M SVSG+
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKA-LSKQEMASVSGS 192
Query: 190 VRGAGA 195
R G
Sbjct: 193 QRERGG 198
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|119617171|gb|EAW96765.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_e [Homo
sapiens]
Length = 317
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|432933127|ref|XP_004081818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oryzias latipes]
Length = 340
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 97/178 (54%), Gaps = 8/178 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +F Q+G + + DP + +SRGF FVTY+ VDD +
Sbjct: 13 RKLFIGGLSFETTEESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVTYSNVTEVDDAMK 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K KIFVGG+ + E +R+YF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFEKYGKIEC 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVS 187
++S K+GFCF++FDD + D+++ +I +V++ + + M ++S
Sbjct: 133 IDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHIINFHNCEVRKA-LSKQEMNTIS 189
>gi|425766220|gb|EKV04844.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
PHI26]
gi|425779142|gb|EKV17231.1| Heterogeneous nuclear ribonucleoprotein HRP1 [Penicillium digitatum
Pd1]
Length = 447
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 3/148 (2%)
Query: 31 KEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK 90
+ + DYFSQ+GEV+ ++ D TG+SRGF F+T+ K V+ ++ +HY+ K IDPK
Sbjct: 11 ESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVK-EHYLDGKIIDPK 69
Query: 91 RVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISF 149
R R K KIFVGG++ E TEQD + +F Q+G + + DK +GF F++F
Sbjct: 70 RAIPRDEQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTF 129
Query: 150 DDQNVADQVLKNPKQVICGKEVDVKRVK 177
D ++ L P +++ GK ++VK+ +
Sbjct: 130 DGDAAVEKALSRPLEIL-GKPIEVKKAQ 156
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + E++ +F Q+G V ++ D TG+ RGF FVT+ AV+ L+
Sbjct: 82 KIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAVEKALSR 141
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+G K I+ K+ R N
Sbjct: 142 PLEILG-KPIEVKKAQPRGN 160
>gi|345323589|ref|XP_003430726.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 3 [Ornithorhynchus anatinus]
Length = 302
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD ++
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|224110618|ref|XP_002315580.1| predicted protein [Populus trichocarpa]
gi|222864620|gb|EEF01751.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 22/183 (12%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D+ KLF+GG+ T E+++ DYF QYG+V + D TG+ RGF FV + AV D+
Sbjct: 4 DQGKLFIGGISWETSEEKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVFA-DPAVLDM 62
Query: 75 LAAGDHYIGNKKIDPKRVTKR-----------VNPLKC----------KIFVGGLTTEIT 113
+ H I + ++ KR R +NP + KIFVGGL +T
Sbjct: 63 VLQDKHTIDGRMVEAKRALSREEQQTNARAGNLNPARNTSGGGNIRTKKIFVGGLPPTLT 122
Query: 114 EQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDV 173
E R YF +G + + +D+S +GF FISFD ++ D+VL+ + GK+V+V
Sbjct: 123 EDGFRQYFEAFGFVADVVIMYDQSTQRPRGFGFISFDTEDAVDRVLQRSFHDLNGKQVEV 182
Query: 174 KRV 176
KR
Sbjct: 183 KRA 185
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
A T+G G +K+FVGGL E YF +G V + I D T + RGF F++
Sbjct: 98 ARNTSGGGNIRTKKIFVGGLPPTLTEDGFRQYFEAFGFVADVVIMYDQSTQRPRGFGFIS 157
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKR-VTKRVNP 98
+ T+ AVD +L H + K+++ KR + K NP
Sbjct: 158 FDTEDAVDRVLQRSFHDLNGKQVEVKRALPKEANP 192
>gi|242006645|ref|XP_002424159.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212507484|gb|EEB11421.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 423
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T ++ + YFS+YG+V + + +G+SRGF FVT+ V +L
Sbjct: 20 KLFVGGLSWETTQEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFADPTNVGVVLQN 79
Query: 78 GDHYIGNKKIDPKRVTKRV------NPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQ 131
G H + + IDPK R N K+F+GGL + +TE D+R +F +YG + E
Sbjct: 80 GPHVLDGRTIDPKPCNPRTLSKPKRNNGYPKVFLGGLPSNVTETDLRQFFMRYGKVMEVV 139
Query: 132 QPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+D+ K +GF F+SF+D++ ++ + + + GK+V++K+ +
Sbjct: 140 IMYDQEKKKSRGFGFLSFEDEDAVERCVADHFVNLHGKQVEIKKAE 185
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 92 VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDD 151
+ K V L K+FVGGL+ E T++ ++ YFS+YG + + + +GF F++F D
Sbjct: 10 IDKFVMNLLIKLFVGGLSWETTQEALQRYFSRYGDVVDCVVMKNTESGRSRGFGFVTFAD 69
Query: 152 QNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
VL+N V+ G+ +D K NP T+
Sbjct: 70 PTNVGVVLQNGPHVLDGRTIDPKPC--NPRTL 99
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 11 PGRNDE-RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQK 69
P RN+ K+F+GGL N E ++ +F +YG+V + I D +SRGF F+++ +
Sbjct: 102 PKRNNGYPKVFLGGLPSNVTETDLRQFFMRYGKVMEVVIMYDQEKKKSRGFGFLSFEDED 161
Query: 70 AVDDLLAAGDHYIG-------NKKIDPKRVTKRVN 97
AV+ +A DH++ KK +P+ + ++N
Sbjct: 162 AVERCVA--DHFVNLHGKQVEIKKAEPRDASGKMN 194
>gi|111306451|gb|AAI21134.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|405977263|gb|EKC41722.1| Heterogeneous nuclear ribonucleoprotein A2-like protein 1
[Crassostrea gigas]
Length = 363
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 93/168 (55%), Gaps = 7/168 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + YF ++G + + DP T +SRGF F+TY +D+ A
Sbjct: 42 RKLFIGGLSYETTDSTLKSYFEKWGTITDCVVMTDPQTKRSRGFGFITYEKVAMLDECQA 101
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKC-------KIFVGGLTTEITEQDVRDYFSQYGSITE 129
H I ++++ KR R + K+FVGGL TE DVR+ F +YG+I
Sbjct: 102 NRPHKIDGREVETKRAMPREESGRSESQKSNEKMFVGGLRDTTTEDDVREAFQEYGNIKN 161
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK+ N +GFCF++FDD + D+ + + IC K+V+VK+ +
Sbjct: 162 IELIKDKATNKTRGFCFVTFDDYDPVDKCVLKKRFKICDKDVEVKKAE 209
>gi|380792669|gb|AFE68210.1| heterogeneous nuclear ribonucleoprotein A1 isoform a, partial
[Macaca mulatta]
Length = 317
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|348519655|ref|XP_003447345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oreochromis niloticus]
Length = 335
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +F Q+G + + DP + +SRGF FVTY++ + VDD +
Sbjct: 13 RKLFIGGLSFETTEESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVREVDDAMK 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K KIFVGG+ + E +R+YF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFEKYGKIEC 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVS 187
++S K+GFCF++FDD + D+++ I +V++ + + M ++S
Sbjct: 133 IDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKFHTINFHNCEVRKA-LSKQEMSAIS 189
>gi|395837290|ref|XP_003791571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Otolemur
garnettii]
Length = 347
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|291410919|ref|XP_002721735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
R+LF+GGL T + + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|403271005|ref|XP_003927441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|148671986|gb|EDL03933.1| mCG15678, isoform CRA_d [Mus musculus]
Length = 326
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 20 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 79
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 80 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 139
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 140 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 185
>gi|291402435|ref|XP_002717573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RD+F QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|148671985|gb|EDL03932.1| mCG15678, isoform CRA_c [Mus musculus]
Length = 335
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 29 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 88
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 89 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 148
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 149 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 194
>gi|190360152|sp|P0C7M2.1|RA1L3_HUMAN RecName: Full=Putative heterogeneous nuclear ribonucleoprotein
A1-like 3; Short=hnRNP A1-like 3; AltName: Full=hnRNP
core protein A1-like 3
gi|119621694|gb|EAX01289.1| hCG2020860, isoform CRA_b [Homo sapiens]
gi|119621695|gb|EAX01290.1| hCG2020860, isoform CRA_b [Homo sapiens]
Length = 320
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|402882999|ref|XP_003905018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Papio
anubis]
Length = 378
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PK+ R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKKAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K GF F++FDD + D+++ I G +VK+ + + M S +G+
Sbjct: 155 IEVMEDRQSGKKTGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA-LSKQEMQS-AGS 212
Query: 190 VRGAGA 195
RG G
Sbjct: 213 QRGHGG 218
>gi|334349111|ref|XP_001368260.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Monodelphis domestica]
Length = 341
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD ++
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|149634029|ref|XP_001510026.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Ornithorhynchus anatinus]
gi|345323587|ref|XP_003430725.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 344
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD ++
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 187
Query: 190 VRGAGA 195
G G
Sbjct: 188 RSGRGG 193
>gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Homo sapiens]
gi|6754220|ref|NP_034577.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Mus musculus]
gi|114052384|ref|NP_001039376.1| heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|116175259|ref|NP_001070686.1| heterogeneous nuclear ribonucleoprotein A1 [Sus scrofa]
gi|148529006|ref|NP_001091892.1| heterogeneous nuclear ribonucleoprotein A1-like 1 [Pan troglodytes]
gi|308193354|ref|NP_001184040.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|73996139|ref|XP_848386.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Canis lupus familiaris]
gi|332864208|ref|XP_003318234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
gi|354503661|ref|XP_003513899.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Cricetulus
griseus]
gi|402886231|ref|XP_003906538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Papio
anubis]
gi|410058477|ref|XP_003954396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Pan troglodytes]
gi|410964599|ref|XP_003988841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Felis catus]
gi|426224335|ref|XP_004006327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Ovis aries]
gi|1350822|sp|P49312.2|ROA1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=HDP-1; AltName:
Full=Helix-destabilizing protein; AltName:
Full=Single-strand-binding protein; AltName:
Full=Topoisomerase-inhibitor suppressed; AltName:
Full=hnRNP core protein A1
gi|156637352|sp|A5A6H4.1|ROA1_PANTR RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|172046785|sp|P09867.2|ROA1_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=Unwinding protein 1; Short=UP1;
AltName: Full=hnRNP core protein A1
gi|70819|pir||DDRT helix-destabilizing protein - rat
gi|87651|pir||S04617 heterogeneous ribonuclear particle protein A1 - human
gi|193324|gb|AAA37633.1| RNA binding protein [Mus musculus]
gi|296650|emb|CAA31191.1| hnrnp a1 protein [Homo sapiens]
gi|496898|emb|CAA56072.1| hnRNPcore protein A1 [Homo sapiens]
gi|1711242|dbj|BAA13162.1| TIS [Mus musculus]
gi|12803103|gb|AAH02355.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|12841583|dbj|BAB25267.1| unnamed protein product [Mus musculus]
gi|15082486|gb|AAH12158.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|16307046|gb|AAH09600.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|21707258|gb|AAH33714.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|26353286|dbj|BAC40273.1| unnamed protein product [Mus musculus]
gi|47125420|gb|AAH70315.1| HNRPA1 protein [Homo sapiens]
gi|49257442|gb|AAH73162.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|49522847|gb|AAH74502.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|51490837|emb|CAH18571.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|51873929|gb|AAH80675.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|53236995|gb|AAH83136.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|55930978|gb|AAH52296.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|56971262|gb|AAH88150.1| Hnrpa1 protein [Rattus norvegicus]
gi|67968511|dbj|BAE00617.1| unnamed protein product [Macaca fascicularis]
gi|74180018|dbj|BAE36552.1| unnamed protein product [Mus musculus]
gi|74183107|dbj|BAE22518.1| unnamed protein product [Mus musculus]
gi|74184983|dbj|BAE39104.1| unnamed protein product [Mus musculus]
gi|74189079|dbj|BAE39302.1| unnamed protein product [Mus musculus]
gi|74204144|dbj|BAE39837.1| unnamed protein product [Mus musculus]
gi|74204330|dbj|BAE39920.1| unnamed protein product [Mus musculus]
gi|74204859|dbj|BAE20929.1| unnamed protein product [Mus musculus]
gi|74214152|dbj|BAE40333.1| unnamed protein product [Mus musculus]
gi|74214339|dbj|BAE40409.1| unnamed protein product [Mus musculus]
gi|86823844|gb|AAI05414.1| Heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|115371763|gb|ABI96206.1| ROA1 [Sus scrofa]
gi|119617167|gb|EAW96761.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617175|gb|EAW96769.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617176|gb|EAW96770.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|146741382|dbj|BAF62347.1| heterogeneous nuclear ribonucleoprotein A1, transcript variant 1
[Pan troglodytes verus]
gi|148671984|gb|EDL03931.1| mCG15678, isoform CRA_b [Mus musculus]
gi|149031879|gb|EDL86791.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|149031881|gb|EDL86793.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|158255662|dbj|BAF83802.1| unnamed protein product [Homo sapiens]
gi|208966454|dbj|BAG73241.1| heterogeneous nuclear ribonucleoprotein A1 [synthetic construct]
gi|296487907|tpg|DAA30020.1| TPA: heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|335772612|gb|AEH58124.1| heterogeneous nuclear ribonucleoprotein A-like protein [Equus
caballus]
gi|380812306|gb|AFE78027.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
gi|380812308|gb|AFE78028.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
Length = 320
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|403255345|ref|XP_003920400.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNCEVRK 179
>gi|291415461|ref|XP_002723970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RD+F QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ ++GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASTSST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 30/193 (15%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+D+ KLF+GG+ T E+++ ++FS +GEV ++ D TG+ RGF FV Y +VD
Sbjct: 2 ESDQGKLFIGGISWETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVD 61
Query: 73 DLLAAGDHYIGNKKIDPKRV--------TKRVNPLKC---------------------KI 103
L H + + +D KR TK VNP KI
Sbjct: 62 AALQE-PHTLDGRTVDVKRALSREEQQATKAVNPSAGRNAGGGGGGGGGGDAGGARTKKI 120
Query: 104 FVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPK 163
FVGGL + +T+++ R YF +G++T+ +D++ +GF FI+FD ++ D+VL
Sbjct: 121 FVGGLPSSLTDEEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTF 180
Query: 164 QVICGKEVDVKRV 176
+ GK V+VKR
Sbjct: 181 HDLGGKMVEVKRA 193
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL + ++E YF +G V + + D T + RGF F+T+ ++ AVD +L
Sbjct: 118 KKIFVGGLPSSLTDEEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLH 177
Query: 77 AGDHYIGNKKIDPKRVTKR-VNP 98
H +G K ++ KR R NP
Sbjct: 178 KTFHDLGGKMVEVKRALPREANP 200
>gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Homo sapiens]
gi|397472158|ref|XP_003807623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Pan
paniscus]
gi|288558857|sp|P09651.5|ROA1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=hnRNP core protein A1
gi|119617168|gb|EAW96762.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|119617174|gb|EAW96768.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|380812310|gb|AFE78029.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Macaca
mulatta]
Length = 372
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|335347347|ref|NP_001229438.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
gi|410964601|ref|XP_003988842.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Felis catus]
gi|426224339|ref|XP_004006329.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Ovis aries]
gi|74222222|dbj|BAE26919.1| unnamed protein product [Mus musculus]
gi|149031878|gb|EDL86790.1| rCG50547, isoform CRA_b [Rattus norvegicus]
gi|149031880|gb|EDL86792.1| rCG50547, isoform CRA_b [Rattus norvegicus]
Length = 373
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|85060507|ref|NP_001034218.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Mus musculus]
gi|59808855|gb|AAH89340.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|62531241|gb|AAH92395.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|74144667|dbj|BAE27318.1| unnamed protein product [Mus musculus]
gi|74185136|dbj|BAE39169.1| unnamed protein product [Mus musculus]
gi|74219989|dbj|BAE40574.1| unnamed protein product [Mus musculus]
Length = 373
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|402220502|gb|EJU00573.1| hypothetical protein DACRYDRAFT_53825 [Dacryopinax sp. DJM-731 SS1]
Length = 382
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 98/157 (62%), Gaps = 3/157 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+FVGGL+ +T ++ + YF Q+GEV++ +I D G+SRGFAF+T+ AV+ ++
Sbjct: 1 MFVGGLNWDTTDESLRRYFEQFGEVDACTIMRD-AGGRSRGFAFLTFREPAAVNAVMVR- 58
Query: 79 DHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+H++ K IDPKR R+ K K+F+GGL +T + +RD+FSQ+G++ + D+
Sbjct: 59 EHHLDGKIIDPKRAIPRLEHQKTQKLFIGGLAPSVTSESMRDFFSQFGAVIDSTVMVDRE 118
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
KGF F++F+D A++++ I GK ++VK
Sbjct: 119 SGRSKGFGFVTFEDGQGAEKLVGQGILSIDGKPIEVK 155
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+KLF+GGL + + + D+FSQ+G V ++ D +G+S+GF FVT+ + + L+
Sbjct: 82 QKLFIGGLAPSVTSESMRDFFSQFGAVIDSTVMVDRESGRSKGFGFVTFEDGQGAEKLVG 141
Query: 77 AGDHYIGNKKIDPKRVTKR 95
G I K I+ K R
Sbjct: 142 QGILSIDGKPIEVKIAQPR 160
>gi|383416553|gb|AFH31490.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 272
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|195997575|ref|XP_002108656.1| hypothetical protein TRIADDRAFT_5340 [Trichoplax adhaerens]
gi|190589432|gb|EDV29454.1| hypothetical protein TRIADDRAFT_5340, partial [Trichoplax
adhaerens]
Length = 172
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 88/161 (54%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
+ERKLFVGGL T E+ ++F ++GEV + I DP T +SRGF F+ Y +D
Sbjct: 1 EERKLFVGGLSWETTEERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKA 60
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
L H I K+++PKR R KIF+GGL +++D++ YF +YG ++E +
Sbjct: 61 LLHATHVIDGKQVEPKRSVPREQTRTKKIFIGGLPPNTSDEDLKIYFGKYGVVSEVELLR 120
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK +GF F+SFD A + L I GK VK+
Sbjct: 121 DKETGRLRGFGFVSFDTPEGAQKALVTKMHEINGKMAQVKK 161
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+F+GGL NT ++++ YF +YG V + + D TG+ RGF FV++ T + L
Sbjct: 87 KKIFIGGLPPNTSDEDLKIYFGKYGVVSEVELLRDKETGRLRGFGFVSFDTPEGAQKALV 146
Query: 77 AGDHYIGNKKIDPKRVTKRVN 97
H I K K+ +V+
Sbjct: 147 TKMHEINGKMAQVKKAEPKVD 167
>gi|440901911|gb|ELR52772.1| Heterogeneous nuclear ribonucleoprotein A3, partial [Bos grunniens
mutus]
Length = 182
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 6 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 65
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 66 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 125
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 126 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 171
>gi|355766014|gb|EHH62484.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
fascicularis]
Length = 372
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|148671983|gb|EDL03930.1| mCG15678, isoform CRA_a [Mus musculus]
Length = 371
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 12 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 71
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 72 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 131
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 132 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 177
>gi|357146558|ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 98/190 (51%), Gaps = 27/190 (14%)
Query: 13 RNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+D+ KLF+GG+ T E++++++FS +GEV ++ D TG+ RGF FV Y AVD
Sbjct: 2 ESDQGKLFIGGISWETTEEKLHEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVD 61
Query: 73 DLLAAGDHYIGNKKIDPKRVTKR--------VNPLKC------------------KIFVG 106
L H + + +D KR R VNP KIFVG
Sbjct: 62 AALLE-PHTLDGRTVDVKRALSREEQQASKAVNPSTGRNTGGGGGGNDASGTRTKKIFVG 120
Query: 107 GLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVI 166
GL + +T+ + R YF +G++T+ +D++ +GF FI+FD ++ D+VL +
Sbjct: 121 GLPSSLTDDEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHKTFHDL 180
Query: 167 CGKEVDVKRV 176
GK V+VKR
Sbjct: 181 GGKMVEVKRA 190
>gi|90075098|dbj|BAE87229.1| unnamed protein product [Macaca fascicularis]
Length = 304
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|148673673|gb|EDL05620.1| mCG50656 [Mus musculus]
Length = 271
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 94
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 95 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 154
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 155 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 200
>gi|222101818|gb|ACM44033.1| hnRNPA/B-like 28 [Bombyx mori]
Length = 256
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 119/233 (51%), Gaps = 15/233 (6%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVD 72
+DE+ KLFVGGL T ++ + YFS+YGEV + + +G+SRGF FVT+ V+
Sbjct: 9 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 68
Query: 73 DLLAAGDHYIGNKKIDPKRVTKRV--NPLKC----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L G H + + IDPK R P + K+F+GGL + +TE D+R +F +YG
Sbjct: 69 LVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRVFFGRYGK 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSV 186
+ E +D+ + +GF F+SF+D+ ++V + + GK+V++KR + P
Sbjct: 129 VMEVVIMYDQERKKSRGFGFLSFEDEISVERVTQEHFINLNGKQVEIKRAE--PRDGSGK 186
Query: 187 SGAVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAADYGYTAGSYDAYATA 239
G+ G + + Y + A P DY YT GS D Y A
Sbjct: 187 LGSGGGGMGGGAMNASRYGGEYQQPAAQP------PGDDYEYTGGSGDGYQRA 233
>gi|348535473|ref|XP_003455225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Oreochromis niloticus]
Length = 332
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 101/167 (60%), Gaps = 2/167 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A G D K+FVGGL +T +K++ DYFS++GEV +IK D TG+SRGF F+ +
Sbjct: 66 ASKGEEDAGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDQQTGRSRGFGFILFKDA 125
Query: 69 KAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
+V+ +L +H + ++IDPK+ + + +P+K KIFVGGL + +++ + +YF +G I
Sbjct: 126 ASVEKVLEQKEHRLDGRQIDPKKAMAMKKDPVK-KIFVGGLNPDTSKEVIEEYFGTFGEI 184
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ P D ++GF FI++ ++ +V++ + G + ++K
Sbjct: 185 ETIELPQDPKTEKRRGFVFITYKEEAPVKKVMEKKYHNVGGSKCEIK 231
>gi|365982363|ref|XP_003668015.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
gi|343766781|emb|CCD22772.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
Length = 552
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLF+GGL+ T E+++ DYFS+YG V + I D +G+SRGF F+++ +VD+++ +
Sbjct: 230 KLFIGGLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSFEHPSSVDEVVKS 289
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++F+Q+G+I + Q DK
Sbjct: 290 -QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDK 348
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
+GF FI++D D+V +N K++++KR
Sbjct: 349 DTGRSRGFGFITYDSGEAVDRVCQNKYIQFKDKQIEIKRA 388
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL E TE+ ++DYFS+YG++ + + D + +GF F+SF+ + D+V+K
Sbjct: 229 CKLFIGGLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSFEHPSSVDEVVK 288
Query: 161 NPKQVICGKEVDVKRV 176
+ + ++ GK +D KR
Sbjct: 289 S-QHILDGKVIDPKRA 303
>gi|395540858|ref|XP_003772367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Sarcophilus
harrisii]
Length = 372
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|171451950|dbj|BAG15903.1| musashi [Dugesia japonica]
Length = 473
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 97/169 (57%), Gaps = 7/169 (4%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N+ KLFVGGL+ T + + YFSQ+GE++ + D +SRGF FVT+T V
Sbjct: 40 NEPCKLFVGGLNPTTTSEALQSYFSQFGEIKEFMVMRDIVHKRSRGFGFVTFTDYNGVIK 99
Query: 74 LLAAGDHYIGNKKIDPKRVTKR--VNPLKC-----KIFVGGLTTEITEQDVRDYFSQYGS 126
+L +H + +KKIDPK + P K KIF+GG+ T T +++R YF++YG
Sbjct: 100 VLKQENHILDSKKIDPKLAVPKSICQPEKISARTKKIFIGGIATSSTVEEIRQYFNRYGE 159
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ + DK+ N +GF F++F D++VA+Q+ + I K V+ K+
Sbjct: 160 VENCELMMDKATNRHRGFGFVTFLDEDVAEQICQIHYHNINNKMVEAKK 208
>gi|440900708|gb|ELR51786.1| hypothetical protein M91_06025, partial [Bos grunniens mutus]
Length = 315
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 9 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 69 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 129 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 174
>gi|74220381|dbj|BAE31416.1| unnamed protein product [Mus musculus]
Length = 320
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|31455238|gb|AAH00506.3| HNRNPA2B1 protein [Homo sapiens]
Length = 249
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 96/181 (53%), Gaps = 7/181 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 69 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ E + A
Sbjct: 129 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEDLEVA 188
Query: 190 V 190
+
Sbjct: 189 I 189
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 5/159 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGG+ NT E+ + DYF +YG V + D T +SRGF FVT+ K+V D+L++
Sbjct: 1 KLFVGGISWNTNEESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSS 60
Query: 78 GDHYIGNKKIDPKRVTKR--VNPLKC---KIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
G H + +++IDPKR R +P K+F+GGL + + E +++YF Q+G I +
Sbjct: 61 GPHVVCDREIDPKRAIPRSSSDPASTTIKKLFLGGLASSMNEDSIKNYFVQFGEIEDALC 120
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEV 171
D+ +GF FI+F + A+ VL+ I G V
Sbjct: 121 QRDRDTGRPRGFGFITFKTEEAAESVLRQQYHTIDGNRV 159
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%)
Query: 8 TAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTT 67
++ P +KLF+GGL + E I +YF Q+GE+E + D TG+ RGF F+T+ T
Sbjct: 80 SSDPASTTIKKLFLGGLASSMNEDSIKNYFVQFGEIEDALCQRDRDTGRPRGFGFITFKT 139
Query: 68 QKAVDDLLAAGDHYIGNKKI 87
++A + +L H I ++
Sbjct: 140 EEAAESVLRQQYHTIDGNRV 159
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+FVGG++ E+ + DYF +YG++ + D +GF F++F D VL +
Sbjct: 1 KLFVGGISWNTNEESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSS 60
Query: 162 PKQVICGKEVDVKR 175
V+C +E+D KR
Sbjct: 61 GPHVVCDREIDPKR 74
>gi|38328245|gb|AAH62235.1| Hnrpa1 protein [Rattus norvegicus]
Length = 313
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E + +YF +YG V + I DP TG+SRGF F+++ +VD+++
Sbjct: 147 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 206
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+G+I + Q DK
Sbjct: 207 -QHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 265
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N +++++KR +
Sbjct: 266 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 306
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL + TE ++R+YF +YG++T+ + D + +GF F+SF+ + D+V+K
Sbjct: 146 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 205
Query: 161 NPKQVICGKEVDVKR 175
+ ++ GK +D KR
Sbjct: 206 T-QHILDGKVIDPKR 219
>gi|426234977|ref|XP_004011468.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Ovis aries]
Length = 319
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|444520816|gb|ELV13038.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 205
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|355564301|gb|EHH20801.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
mulatta]
Length = 372
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus]
gi|133255|sp|P04256.3|ROA1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; Short=HDP; AltName: Full=Single-strand
RNA-binding protein; AltName: Full=hnRNP core protein A1
gi|204580|gb|AAA41314.1| helix destabilizing protein [Rattus norvegicus]
Length = 320
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|291410921|ref|XP_002721736.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
R+LF+GGL T + + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|36102|emb|CAA29922.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF Q+G I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ KKGF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKKGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ T E + +YF++YG V + I D TG+SRGF F+T+ +VD++
Sbjct: 195 DSCKMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRGFGFLTFEHPSSVDEV 254
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR + K KIFVGG+ T++ ++ ++F+Q+G+I + Q
Sbjct: 255 VKT-QHILDGKVIDPKRSIPKEEQDKIGKIFVGGIGTDVRPKEFEEFFAQFGTIIDAQLM 313
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
DK +GF FI++D + D+V +N GK+++VKR +
Sbjct: 314 LDKDTGRSRGFGFITYDSADAVDKVCQNKYIDFKGKQIEVKRAQ 357
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F ++G++ + + DP T +SRGF F+TY+ +D+
Sbjct: 26 RKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDEAQK 85
Query: 77 AGDHYIGNKKIDPKRVTKRVN-------PLKCKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R + K+FVG L + EQ +RDYF +GSI +
Sbjct: 86 ARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHFGSIVD 145
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D+V+ + + GK VDVK+
Sbjct: 146 INIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKK 191
>gi|444513904|gb|ELV10489.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Tupaia
chinensis]
Length = 432
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 9 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 69 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 129 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 174
>gi|392575433|gb|EIW68566.1| hypothetical protein TREMEDRAFT_74094 [Tremella mesenterica DSM
1558]
Length = 466
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
DE K+F+GGL+ T ++++ Y S++GE+++ ++ DP TG+SRGFAF+TY +V +
Sbjct: 109 DEGKMFIGGLNWETTDEKLRAYMSEFGEIDACTVMRDP-TGRSRGFAFLTYVDPASVTKV 167
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
L H++ K+IDPKR R K K+FVGGL +T + +R + S +G + +
Sbjct: 168 LGQ-THHLDGKQIDPKRAIPRAEHEKTAKVFVGGLAATVTSESLRTFLSTFGGVLDATVM 226
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ N KGF F +F++++ + ++ + GK++++++ +
Sbjct: 227 IDRDTNRSKGFAFATFENEDGVLKAMEASGSELDGKQIEIRKAQ 270
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 98 PLKCKIFVGGLTTEITEQDVRDYFSQYGSI---TEFQQPFDKSKNMKKGFCFISFDDQNV 154
P + K+F+GGL E T++ +R Y S++G I T + P +S +GF F+++ D
Sbjct: 108 PDEGKMFIGGLNWETTDEKLRAYMSEFGEIDACTVMRDPTGRS----RGFAFLTYVDPAS 163
Query: 155 ADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSS 199
+VL + GK++D KR E + V G A V+S
Sbjct: 164 VTKVLGQ-THHLDGKQIDPKRAIPRAEHEKTAKVFVGGLAATVTS 207
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E + +YF +YG V + I DP TG+SRGF F+++ +VD+++
Sbjct: 163 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 222
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+G+I + Q DK
Sbjct: 223 -QHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 281
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N +++++KR +
Sbjct: 282 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 322
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL + TE ++R+YF +YG++T+ + D + +GF F+SF+ + D+V+K
Sbjct: 162 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 221
Query: 161 NPKQVICGKEVDVKRV 176
+ ++ GK +D KR
Sbjct: 222 T-QHILDGKVIDPKRA 236
>gi|395835057|ref|XP_003790500.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Otolemur
garnettii]
Length = 373
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTXXXXXVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|395540406|ref|XP_003772146.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Sarcophilus harrisii]
Length = 385
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD ++
Sbjct: 34 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS 93
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 94 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 153
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +V++ + + M V +
Sbjct: 154 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNTEVRKA-LSRQEMQEVQSS 212
Query: 190 VRGAGA 195
G G
Sbjct: 213 RSGRGG 218
>gi|351709863|gb|EHB12782.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 392
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 99 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 158
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 159 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 218
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 219 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 264
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 20/159 (12%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ +
Sbjct: 35 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFVTYSCVEE------ 88
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
G+ +P+++ K+F+GGL+ E T+ +R++F ++G++T+ D
Sbjct: 89 ------GHDPKEPEQLR--------KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDP 134
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+GF F+++ D + + G+ V+ KR
Sbjct: 135 QTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKR 173
>gi|344284648|ref|XP_003414077.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Loxodonta africana]
Length = 372
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 7/167 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY+T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +R YF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRHYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRV 176
+ D+ K+GF F++FDD + D+++ + G +V++V
Sbjct: 134 IEIMTDQGSGKKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKV 180
>gi|355750652|gb|EHH54979.1| hypothetical protein EGM_04098, partial [Macaca fascicularis]
Length = 326
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|426224337|ref|XP_004006328.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Ovis aries]
Length = 310
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|403287876|ref|XP_003935149.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 356
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T K + +F Q+G + + P T SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTHKSLRSHFEQWGTLTGCVVMRHPNTKHSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVG + + E +RDYF QYG I
Sbjct: 74 ARPHKVNGRVVEPKRAVSREDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+S KKGF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRSSGKKKGFAFVTFDDHDSVDKIIIKKYHTVNGHNCEVRK 179
>gi|66801345|ref|XP_629598.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60462994|gb|EAL61190.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 687
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 96/162 (59%), Gaps = 7/162 (4%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEV-ESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
K+FVGGL + + + + DYFS +GEV ESI IK +SRGF FVT+ +D+++
Sbjct: 107 KIFVGGLLKTSSNEILKDYFSNFGEVKESIVIKATEKASKSRGFGFVTFVDPSVIDEVIL 166
Query: 77 AGDHYIGNKKIDPKRVTKRVN----PLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
+H I K ++ +R + P K K+FVGGL IT D +YFS++G I+E+
Sbjct: 167 I-NHSIEGKNVEIRRAIPKEEMTEEPKKQKLFVGGLPKHITSDDFNNYFSEFGEISEYNL 225
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+K+ + KGF FI F D++V + +L + +I GK VD++
Sbjct: 226 LTEKNGTI-KGFGFICFKDESVNEIILNEQQHIILGKRVDIR 266
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 16 ERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLL 75
++KLFVGGL ++ + N+YFS++GE+ ++ + G +GF F+ + + + +L
Sbjct: 193 KQKLFVGGLPKHITSDDFNNYFSEFGEISEYNLLTE-KNGTIKGFGFICFKDESVNEIIL 251
Query: 76 AAGDHYIGNKKID 88
H I K++D
Sbjct: 252 NEQQHIILGKRVD 264
>gi|198435807|ref|XP_002121392.1| PREDICTED: similar to CiMsi [Ciona intestinalis]
Length = 392
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 100/185 (54%), Gaps = 14/185 (7%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL R T + YF +GEV + D TG SRGF F+T+ +V+++L A
Sbjct: 11 KIFVGGLSRQTTSEGFKQYFEGFGEVTDCVLMKDKETGVSRGFGFITFANPSSVNEVLKA 70
Query: 78 GDHYIGNKKIDPKRVTKR--VNPLKC---------KIFVGGLTTEITEQDVRDYFSQYGS 126
H + NK IDPK T + + K KIF+GG++ E T++DV+ YF +YG+
Sbjct: 71 RPHTLDNKGIDPKPCTPKAVLQQKKATANSFTKSHKIFIGGISMEATQEDVKGYFERYGT 130
Query: 127 ITEFQQPFDKSKNMK--KGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMG 184
+ E +K K KGF F++F+D++ DQ + I K ++ K+ + E M
Sbjct: 131 VAEVVFVLNKEDPSKPHKGFGFVTFEDESSVDQAIAKHYHTIKDKRIEAKKAESR-ERMD 189
Query: 185 SVSGA 189
S+ GA
Sbjct: 190 SMKGA 194
>gi|429892782|gb|AGA18936.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 420
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFV GL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 3 DERGKLFVDGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 62
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F++YG +T
Sbjct: 63 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVT 122
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 123 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 171
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F++YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 96 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 155
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 156 RYINLNGKQVEIKKAEPR 173
>gi|133258|sp|P17130.1|ROA1_XENLA RecName: Full=Heterogeneous nuclear ribonucleoproteins A1 homolog;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|214239|gb|AAA49741.1| ribonucleoprotein A1a [Xenopus laevis]
Length = 365
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + ++F Q+G + + DP + +SRGF FVTY + VD +
Sbjct: 14 RKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMT 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +R+YF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++F+D + D+++ + V++ + + M SVSG+
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKA-LSKQEMASVSGS 192
Query: 190 VRGAGA 195
R G
Sbjct: 193 QRERGG 198
>gi|157831273|pdb|1HA1|A Chain A, Hnrnp A1 (Rbd1,2) From Homo Sapiens
Length = 184
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|335302749|ref|XP_003133427.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 447
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 98/185 (52%), Gaps = 8/185 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 115 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 174
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG +
Sbjct: 175 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKVDT 234
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F +FDD + D+++ I G +V++ + + M V +
Sbjct: 235 IEIITDRQSGKKRGFGFFTFDDHDPVDKIVLQKYHTINGHNAEVRKA-LSRQEMQEVQSS 293
Query: 190 VRGAG 194
G G
Sbjct: 294 RSGRG 298
>gi|426341487|ref|XP_004036066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Gorilla gorilla gorilla]
Length = 320
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRDSGKKRGFAFVTFDDHDSLDKIVIQKYHTVKGHNCEVRK 179
>gi|291415465|ref|XP_002723972.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RD+F QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ ++GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASTSST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|291415463|ref|XP_002723971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RD+F QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ ++GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASTSST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|76153568|gb|AAX25192.2| SJCHGC06941 protein [Schistosoma japonicum]
Length = 192
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 100/170 (58%), Gaps = 3/170 (1%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
P N+ KLFVGGLH++T + YFS++G++E ++ D TG+SRGF +V + ++
Sbjct: 5 PQGNEVGKLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDES 64
Query: 71 VDDLLAAGDHYIGNKKIDPKRVT---KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
VD +L H I K++DPKR K N K+FVGG+ + E +R++FS YG +
Sbjct: 65 VDWVLRQKTHLIDLKEVDPKRCNVNMKGKNRRSLKVFVGGIAFDHDENIIRNFFSSYGRV 124
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
T+ ++K +GF F+ F+D+ V ++K + GK+V++K +K
Sbjct: 125 TDVNLLAGQTKPRHRGFAFVGFEDEEVVRNLIKLHYLNLNGKQVEIKAMK 174
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+FVGGL T ++ YFS++G I E D +GF ++ F + D VL+
Sbjct: 12 KLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDESVDWVLRQ 71
Query: 162 PKQVICGKEVDVKRVKFN 179
+I KEVD KR N
Sbjct: 72 KTHLIDLKEVDPKRCNVN 89
>gi|426238559|ref|XP_004013218.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Ovis aries]
Length = 343
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 106/209 (50%), Gaps = 21/209 (10%)
Query: 35 DYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGDHYIGNKKIDPK-RVT 93
DYFS++GE+ + DP T +SRGF FVT+ +VD +L H + +K IDPK
Sbjct: 54 DYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFP 113
Query: 94 KRVNPLKC----KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISF 149
+R P KIFVGGL+ +DV+ YF Q+G + + FDK+ N +GF F++F
Sbjct: 114 RRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTF 173
Query: 150 DDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVSGAVRGAGARVSSAGAA 203
++++V ++V + N K V C K+ K V F P T G G A + G
Sbjct: 174 ENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMG-- 230
Query: 204 YAAAPGRVVAYPSTYAGYAAADYGYTAGS 232
++ YP+ A Y + G+ G+
Sbjct: 231 -------MLGYPNFVATYGSQVSGFAPGT 252
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 125 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 184
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 185 IHFHEINNKMVECKK 199
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
RDYFS++G I E D + +GF F++F D D+VL P + K +D K
Sbjct: 53 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK 109
>gi|355694911|gb|AER99826.1| heteroproteinous nuclear ribonucleoprotein A2/B1 [Mustela putorius
furo]
Length = 173
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 7 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 66
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 67 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 126
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +V++
Sbjct: 127 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRK 172
>gi|351706129|gb|EHB09048.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 313
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 96/165 (58%), Gaps = 6/165 (3%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLFVGGL T +++ +YF +G V + I DP T +SRGF F+T+ +VD +L
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 78 GDHYIGNKKIDPKRVT-----KRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H + KKIDPK T K+ N K KIFVGG++ + + +V+ YF+Q+G + E
Sbjct: 122 PIHTLDGKKIDPKHATPKNRAKQANRTK-KIFVGGVSQDTSSDEVKAYFNQFGKVEETVM 180
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
D+ +GF F++F++++V D+V + I K+V+ K+ +
Sbjct: 181 LMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQ 225
>gi|110767982|ref|XP_624411.2| PREDICTED: hypothetical protein LOC552027 [Apis mellifera]
gi|380027797|ref|XP_003697603.1| PREDICTED: uncharacterized protein LOC100868777 [Apis florea]
Length = 378
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F ++GE+ + + DP T +SRGF F+TY+ VDD
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K+FVGGL + E D++ YF YG+I
Sbjct: 77 ARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEDDLKQYFQSYGTINS 136
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D++ I GK VDVK+
Sbjct: 137 ISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKK 182
>gi|302914266|ref|XP_003051103.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
gi|256732041|gb|EEU45390.1| hypothetical protein NECHADRAFT_41418 [Nectria haematococca mpVI
77-13-4]
Length = 546
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 100/170 (58%), Gaps = 12/170 (7%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 116 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTV-NIVMV 174
Query: 78 GDHYIGNK---------KIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSI 127
+H++ K +IDPKR R K KIFVGG++ E T+Q+ ++YF+Q+G +
Sbjct: 175 KEHFLDGKIVSYRLIPQQIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRV 234
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ DK +GF F++F+ + D + P + I GK ++VK+ +
Sbjct: 235 VDATLMMDKDTGRPRGFGFVTFESEAGVDACINVPLE-IHGKPIEVKKAQ 283
>gi|1711240|dbj|BAA13161.1| TIS [Mus musculus]
gi|119617170|gb|EAW96764.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_d [Homo
sapiens]
Length = 268
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|47214361|emb|CAG01206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 256
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 98/158 (62%), Gaps = 2/158 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL +T +K++ DYF+++G+V +IK D TG+SRGF F+ + +V+ +L
Sbjct: 1 KMFVGGLSWDTSKKDLKDYFNKFGDVTDCTIKMDQGTGRSRGFGFILFKDPASVEKVLEQ 60
Query: 78 GDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
+H + + IDPKR + + P+K K+FVGGL + +++ +++YF ++G I + P D
Sbjct: 61 KEHKLDGRVIDPKRALAMKKEPVK-KVFVGGLNPDTSKEVIQEYFEEFGEIENIELPQDP 119
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
++GF FI++ ++ + L+N + G + ++K
Sbjct: 120 KTEKRRGFVFITYKEEACVKKALENKFHTVGGSKCEIK 157
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL+ +T ++ I +YF ++GE+E+I + DP T + RGF F+TY + V L
Sbjct: 84 KKVFVGGLNPDTSKEVIQEYFEEFGEIENIELPQDPKTEKRRGFVFITYKEEACVKKALE 143
Query: 77 AGDHYIGNKKIDPK 90
H +G K + K
Sbjct: 144 NKFHTVGGSKCEIK 157
>gi|348570610|ref|XP_003471090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 356
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 101/186 (54%), Gaps = 9/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + P T +SRGF FVTY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDRVVMRVPQTKRSRGFGFVTYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +VK+ + + M S +G+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKA-LSKQEMQS-AGS 190
Query: 190 VRGAGA 195
RG G
Sbjct: 191 QRGCGG 196
>gi|313225955|emb|CBY21098.1| unnamed protein product [Oikopleura dioica]
Length = 373
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 4/173 (2%)
Query: 11 PGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKA 70
P + +K+F+GG+ + T + +F Q+G V+ + IK+DP TG SRGF FV + ++
Sbjct: 119 PDSPNNQKMFIGGVSKQTTTASLRAHFEQFGAVKDVEIKSDPTTGLSRGFGFVLFELPES 178
Query: 71 VDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
V+ ++ AG ++ K+IDPK KR CK+F+GG++ + V++ +G + F
Sbjct: 179 VNAVMEAGQQFLDGKRIDPKPAEKR----NCKVFIGGISPSTASETVQELMETFGQVDNF 234
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETM 183
++ D+++ + F F +F D VA + K I GK +VK N + +
Sbjct: 235 ERRTDRNRGTLQPFAFCTFKDDAVASSLAKTRWVEIEGKRCEVKLSIENKQKL 287
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 48/87 (55%)
Query: 88 DPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFI 147
D + + +P K+F+GG++ + T +R +F Q+G++ + + D + + +GF F+
Sbjct: 112 DGQLINSPDSPNNQKMFIGGVSKQTTTASLRAHFEQFGAVKDVEIKSDPTTGLSRGFGFV 171
Query: 148 SFDDQNVADQVLKNPKQVICGKEVDVK 174
F+ + V++ +Q + GK +D K
Sbjct: 172 LFELPESVNAVMEAGQQFLDGKRIDPK 198
>gi|291389273|ref|XP_002711072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+ F F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E + +YF +YG V + I DP TG+SRGF F+++ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+G+I + Q DK
Sbjct: 220 -QHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N +++++KR +
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL + TE ++R+YF +YG++T+ + D + +GF F+SF+ + D+V+K
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 218
Query: 161 NPKQVICGKEVDVKRV 176
+ ++ GK +D KR
Sbjct: 219 T-QHILDGKVIDPKRA 233
>gi|341894622|gb|EGT50557.1| CBN-HRP-1 protein [Caenorhabditis brenneri]
Length = 343
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+FVGGL NT ++ + +++SQ+GE+ I + DP T +SRGF FVT+T + VD +
Sbjct: 23 RKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTGKTEVDAAMK 82
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKC-------KIFVGGLTTEITEQDVRDYFSQYGSITE 129
H I K +DPKR R + + +++V G+ + TE + +YFS+YG++ +
Sbjct: 83 QRPHVIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFSKYGNVVK 142
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ DK+ +GF F++FDD + DQ + ++ G DV++
Sbjct: 143 SEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2, partial
[Columba livia]
Length = 356
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD ++
Sbjct: 11 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 70
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++R+YF +YG I
Sbjct: 71 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIET 130
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 131 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 176
>gi|363741379|ref|XP_415912.3| PREDICTED: RNA-binding protein Musashi homolog 2 [Gallus gallus]
Length = 315
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 17/216 (7%)
Query: 21 VGGLHRNTGEKEIN-DYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAGD 79
VGG R+ G +++ ++FS++GE+ + DP T +SRGF FVT+ +VD +LA
Sbjct: 13 VGG--RDLGYRDVEYEHFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPGSVDKVLAQPH 70
Query: 80 HYIGNKKIDPK-----RVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPF 134
H + +K IDPK R ++ KIFVGGL+ +DV+ YF Q+G + + F
Sbjct: 71 HELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMF 130
Query: 135 DKSKNMKKGFCFISFDDQNVADQVLK------NPKQVICGKEVDVKRVKFNPETMGSVSG 188
DK+ N +GF F++F++++V ++V + N K V C K+ K V F P T G G
Sbjct: 131 DKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVEC-KKAQPKEVMFPPGTRGRARG 189
Query: 189 AVRGAGARVSSAGAAYAAAPGRVVAYPSTYAGYAAA 224
A + G P V Y Y G+A +
Sbjct: 190 LPYTMDAFM--LGMGMLGYPNFVATYGRGYPGFAPS 223
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL NT +++ YF Q+G+VE + D T + RGF FVT+ + V+ +
Sbjct: 97 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 156
Query: 77 AGDHYIGNKKIDPKR 91
H I NK ++ K+
Sbjct: 157 IHFHEINNKMVECKK 171
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E + +YF +YG V + I DP TG+SRGF F+++ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+G+I + Q DK
Sbjct: 220 -QHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N +++++KR +
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL + TE ++R+YF +YG++T+ + D + +GF F+SF+ + D+V+K
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 218
Query: 161 NPKQVICGKEVDVKRV 176
+ ++ GK +D KR
Sbjct: 219 T-QHILDGKVIDPKRA 233
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E + +YF +YG V + I DP TG+SRGF F+++ +VD+++
Sbjct: 162 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 221
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+G+I + Q DK
Sbjct: 222 -QHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 280
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N +++++KR +
Sbjct: 281 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 321
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL + TE ++R+YF +YG++T+ + D + +GF F+SF+ + D+V+K
Sbjct: 161 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 220
Query: 161 NPKQVICGKEVDVKRV 176
+ ++ GK +D KR
Sbjct: 221 T-QHILDGKVIDPKRA 235
>gi|115532850|ref|NP_001040945.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
gi|351063093|emb|CCD71137.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
Length = 347
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+FVGGL NT + + +++SQ+GE+ I + DP T +SRGF FVT++ + VD +
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKC-------KIFVGGLTTEITEQDVRDYFSQYGSITE 129
H I K +DPKR R + + +++V G+ + TE + +YF++YG++T+
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ DK+ +GF F++FDD + DQ + ++ G DV++
Sbjct: 143 SEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E + +YF +YG V + I DP TG+SRGF F+++ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+G+I + Q DK
Sbjct: 220 -QHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N +++++KR +
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL + TE ++R+YF +YG++T+ + D + +GF F+SF+ + D+V+K
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 218
Query: 161 NPKQVICGKEVDVKRV 176
+ ++ GK +D KR
Sbjct: 219 T-QHILDGKVIDPKRA 233
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E + +YF +YG V + I DP TG+SRGF F+++ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+G+I + Q DK
Sbjct: 220 -QHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N +++++KR +
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL + TE ++R+YF +YG++T+ + D + +GF F+SF+ + D+V+K
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 218
Query: 161 NPKQVICGKEVDVKRV 176
+ ++ GK +D KR
Sbjct: 219 T-QHILDGKVIDPKRA 233
>gi|25145229|ref|NP_500326.2| Protein HRP-1, isoform a [Caenorhabditis elegans]
gi|74965787|sp|Q22037.1|ROA1_CAEEL RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1
gi|217300|dbj|BAA01645.1| hnRNP like protein [Caenorhabditis elegans]
gi|351063090|emb|CCD71134.1| Protein HRP-1, isoform a [Caenorhabditis elegans]
Length = 346
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 96/166 (57%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RK+FVGGL NT + + +++SQ+GE+ I + DP T +SRGF FVT++ + VD +
Sbjct: 23 RKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKC-------KIFVGGLTTEITEQDVRDYFSQYGSITE 129
H I K +DPKR R + + +++V G+ + TE + +YF++YG++T+
Sbjct: 83 QRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ DK+ +GF F++FDD + DQ + ++ G DV++
Sbjct: 143 SEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK 188
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD ++
Sbjct: 33 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 92
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++R+YF +YG I
Sbjct: 93 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIET 152
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 153 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 198
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL ++T N +F +YGE+ I D YTGQ RGF FVTY VD ++
Sbjct: 20 KIFIGGLAKDTTYAAFNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIED 79
Query: 78 GDHYIGNKKIDPKRV----TKRVNPLKCK-IFVGGLTTEITEQDVRDYFSQYGSITEFQQ 132
H I K+++ KR + + K K IFVGGL + +TE + +D+FS+YG + E Q
Sbjct: 80 -THVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQI 138
Query: 133 PFDKSKNMKKGFCFISFDDQNVADQVLKNPKQV-ICGKEVDVKRVK 177
D N +GF FI F+ + V D++L + + G +V++K+ +
Sbjct: 139 IRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMAGTQVEIKKAE 184
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL E E D+FS+YG+VE I D T +SRGF F+ + +++ VD++L+
Sbjct: 107 KKIFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILS 166
Query: 77 AGDHY------IGNKKIDPKRVTKRVNPLKCKIF 104
G+ + KK +PK+ + NP F
Sbjct: 167 EGNMIDMAGTQVEIKKAEPKKAS---NPPHVSAF 197
>gi|119572425|gb|EAW52040.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_a
[Homo sapiens]
Length = 309
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 TTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRK 179
>gi|367025853|ref|XP_003662211.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
gi|347009479|gb|AEO56966.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 4/180 (2%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTV-NIVMVK 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E T+ + R+YF+Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVR-GAGAR 196
+GF F++F+ + + L + I GK ++VK+ + A R GAGA+
Sbjct: 120 TGRPRGFGFVTFESEAGVEACLAANLE-IHGKPIEVKKAQPRGNLRDDDDAARRGGAGAK 178
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + T + E +YF+Q+G V ++ D TG+ RGF FVT+ ++ V+ LAA
Sbjct: 84 KIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLAA 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+ I K I+ K+ R N
Sbjct: 144 -NLEIHGKPIEVKKAQPRGN 162
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 9/168 (5%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+KLF+GGL NT + + +YF YG+++ + I DP T +SRGF FVT+ ++ +L
Sbjct: 17 KKLFIGGLSPNTTLETLRNYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEKILL 76
Query: 77 AGDHYIGNKKIDPK--------RVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSI 127
H++ +KKIDPK V K +N K K+F+GGL+ +D+ +F +YG I
Sbjct: 77 NSPHFLDSKKIDPKIAIPKKPDLVDKSINTEKTRKVFIGGLSNNTVHKDLEAFFGKYGKI 136
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ DKS N +GF F+ F+ + +A+ + I K V+ K+
Sbjct: 137 ESCELMMDKSTNRHRGFGFVMFEKEEIANHICNIRYHEINSKMVEAKK 184
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E + +YF +YG V + I DP TG+SRGF F+++ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+G+I + Q DK
Sbjct: 220 -QHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N +++++KR +
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL + TE ++R+YF +YG++T+ + D + +GF F+SF+ + D+V+K
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 218
Query: 161 NPKQVICGKEVDVKRV 176
+ ++ GK +D KR
Sbjct: 219 T-QHILDGKVIDPKRA 233
>gi|47939618|gb|AAH71945.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF Q+G I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|291389618|ref|XP_002711396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RD+F QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|291389616|ref|XP_002711395.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RD+F QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|157834095|pdb|1UP1|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
Length = 182
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 12 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 71
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 72 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 131
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 132 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 177
>gi|426241336|ref|XP_004014547.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKGSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 96/161 (59%), Gaps = 2/161 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL+ +T E + +YF +YG V + I DP TG+SRGF F+++ +VD+++
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDK 136
H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+G+I + Q DK
Sbjct: 220 -QHILDGKVIDPKRAIPRDEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDK 278
Query: 137 SKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F+++D + D+V +N +++++KR +
Sbjct: 279 DTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAE 319
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 101 CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLK 160
CK+F+GGL + TE ++R+YF +YG++T+ + D + +GF F+SF+ + D+V+K
Sbjct: 159 CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 218
Query: 161 NPKQVICGKEVDVKRV 176
+ ++ GK +D KR
Sbjct: 219 T-QHILDGKVIDPKRA 233
>gi|148230657|ref|NP_001081318.1| heterogeneous nuclear ribonucleoprotein A3 homolog 1 [Xenopus
laevis]
gi|1710625|sp|P51968.1|RO31_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 1;
AltName: Full=hnRNP A3(A)
gi|214745|gb|AAA49949.1| ribonucleoprotein [Xenopus laevis]
Length = 373
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F Q+G++ + DP T +SRGF FVTY+ + VD ++
Sbjct: 27 RKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMS 86
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDY YG I
Sbjct: 87 ARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYSESYGKIET 146
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I G +VK+ E + +
Sbjct: 147 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQTASAQR 206
Query: 190 VRGAGA 195
RG G
Sbjct: 207 GRGGGG 212
>gi|426341485|ref|XP_004036065.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Gorilla gorilla gorilla]
Length = 320
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+ + + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRK 179
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD ++
Sbjct: 40 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 99
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++R+YF +YG I
Sbjct: 100 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIET 159
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 160 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 205
>gi|444314863|ref|XP_004178089.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
gi|387511128|emb|CCH58570.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
Length = 472
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 5/183 (2%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+F+GGL+ +T E + YF++YG V + I D + G+SRGF F+T+ +VD++
Sbjct: 148 DSCKMFIGGLNWDTTEDVLRQYFNKYGNVIDVKIMTDGHNGKSRGFGFLTFENSSSVDEV 207
Query: 75 LAAGDHYIGNKKIDPKRVTKRVNPLKC-KIFVGGLTTEITEQDVRDYFSQYGSITEFQQP 133
+ H + K IDPKR R K KIFVGG+ ++ ++ ++FSQ+GSI + Q
Sbjct: 208 VKT-QHILDGKVIDPKRAIPREEQDKTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLM 266
Query: 134 FDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGAVRGA 193
DK +GF F+++D + D+V +N GK +++KR + + G+ + RG
Sbjct: 267 LDKDTGRSRGFGFVTYDSPDAVDKVCQNKFIEFKGKTIEIKRAE---QRGGTGNNNERGG 323
Query: 194 GAR 196
R
Sbjct: 324 NRR 326
>gi|291389275|ref|XP_002711073.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+ F F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|429892786|gb|AGA18938.1| heterogeneous nuclear ribonucleoprotein, partial [Drosophila
melanogaster]
Length = 418
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 99/169 (58%), Gaps = 6/169 (3%)
Query: 15 DER-KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
DER KLFV GL T ++ ++ YF ++G++ + + +G+SRGF FVT+ V+
Sbjct: 1 DERGKLFVYGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNH 60
Query: 74 LLAAGDHYIGNKKIDPKRVTKRV--NPLKC---KIFVGGLTTEITEQDVRDYFSQYGSIT 128
+L G H + + IDPK R P K K+F+GGL + +TE D+R +F++YG +T
Sbjct: 61 VLQNGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVT 120
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
E +D+ K +GF F+SF++++ + V + GK+V++K+ +
Sbjct: 121 EVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAE 169
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+F+GGL N E ++ +F++YG+V + I D +SRGF F+++ + +V+ +
Sbjct: 94 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 153
Query: 78 GDHYIGNKKIDPKRVTKR 95
+ K+++ K+ R
Sbjct: 154 RYINLNGKQVEIKKAEPR 171
>gi|242004925|ref|XP_002423326.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
gi|212506345|gb|EEB10588.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
Length = 286
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 15/166 (9%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F ++GEV + + DP T +SRGF F+TY VDD A
Sbjct: 36 RKLFIGGLDYKTTDETLKSHFEKWGEVVDVVVMKDPKTKRSRGFGFITYAKAHMVDDAQA 95
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
H + N+ ++PKR R + K+F+GG+ E E+D++++F Q+G+I
Sbjct: 96 NRPHKVDNRTVEPKRAVPRTESGRPDAGASIKKLFIGGIKDEHEEEDLKEHFKQFGNIVS 155
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK KKGF F+ +DD + D+ C K +DVK+
Sbjct: 156 CSIVVDKDSGKKKGFAFVEYDDYDPVDKA--------CCKHLDVKK 193
>gi|94482853|gb|ABF22468.1| heterogeneous nuclear ribonucleoprotein A3 [Takifugu rubripes]
Length = 341
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +F ++G + + +P +SRGF FVTY+ + VD+ +
Sbjct: 18 RKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTYSCLREVDEAMK 77
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K KIFVGG+ + E +RDYF +YG I
Sbjct: 78 ARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKYGKIEC 137
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVS 187
++S K+GFCF++FDD + D+++ I +V++ + + M ++S
Sbjct: 138 VDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTINLHNCEVRKA-LSKQEMNAIS 194
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 22/182 (12%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D+ KLFVGG+ T E ++ ++FS YGEV + D TG+ RGF FV ++ +D +
Sbjct: 4 DQGKLFVGGVSWETDEDKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRV 63
Query: 75 LAAGDHYIGNKKIDPKR--------VTKRVNPLKC-------------KIFVGGLTTEIT 113
L H I +++D KR V+ R L KIFVGGL +T
Sbjct: 64 LQD-KHNIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDSFNKTKKIFVGGLPPTLT 122
Query: 114 EQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDV 173
+++ R YF YG +T+ +D++ N +GF F+SFD ++ D+VL + GK+V+V
Sbjct: 123 DEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLHKTFHDLSGKQVEV 182
Query: 174 KR 175
KR
Sbjct: 183 KR 184
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGGL ++E YF YG V ++I D T + RGF FV++ ++ AVD
Sbjct: 107 NKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDR 166
Query: 74 LLAAGDHYIGNKKIDPKR-VTKRVNP 98
+L H + K+++ KR + K NP
Sbjct: 167 VLHKTFHDLSGKQVEVKRALPKDANP 192
>gi|350294627|gb|EGZ75712.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 324
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + DYFSQ+GEV ++ D TG+SRGF F+T+ K V +++
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTV-NIVMVK 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K KIFVGG++ E T+ + R+YF+Q+G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+GF F++F+ + + L + I GK ++VK+ +
Sbjct: 120 TGRPRGFGFVTFESEAGVEACLSANLE-IHGKPIEVKKAQ 158
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ + T + E +YF+Q+G V ++ D TG+ RGF FVT+ ++ V+ L+A
Sbjct: 84 KIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGVEACLSA 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
+ I K I+ K+ R N
Sbjct: 144 -NLEIHGKPIEVKKAQPRGN 162
>gi|109131409|ref|XP_001082949.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Macaca mulatta]
gi|297304279|ref|XP_001082690.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Macaca mulatta]
Length = 320
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHPVNGHNCEVRK 179
>gi|58761496|ref|NP_001011724.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|58761498|ref|NP_001011725.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|190356061|sp|Q32P51.2|RA1L2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1-like 2;
Short=hnRNP A1-like 2; AltName: Full=hnRNP core protein
A1-like 2
gi|119572426|gb|EAW52041.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
gi|119572427|gb|EAW52042.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
Length = 320
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 TTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRK 179
>gi|119923161|ref|XP_001251082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2
isoform 2 [Bos taurus]
gi|297471765|ref|XP_002685448.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2 [Bos
taurus]
gi|296490543|tpg|DAA32656.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 7/165 (4%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
KLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTYTT + VD + A
Sbjct: 15 KLFIGGLRFETIDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEVDAAMNA 74
Query: 78 GDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITEF 130
H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 75 RPHKVDGRAVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVI 134
Query: 131 QQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G V++
Sbjct: 135 EIMTDQGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCQVRK 179
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGG+ +T E + DYF QYG++E I I D +G+ RGFAFVT+ +VD ++
Sbjct: 105 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDQGSGKKRGFAFVTFDDHDSVDKIVI 164
Query: 77 AGDHYI 82
H +
Sbjct: 165 QKYHTV 170
>gi|71013252|ref|XP_758567.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
gi|46098225|gb|EAK83458.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
Length = 588
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 29/197 (14%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
+E K+F+GGL+ +T E + YFSQ+GEV + +I D TG+SRGFAF+ + KAV+ +
Sbjct: 167 EEGKMFIGGLNWDTTEDSLRRYFSQFGEVGNCAIMRDNMTGRSRGFAFLNFVDPKAVNTV 226
Query: 75 LAAGDHYIGNKKIDPKRVTKR--------------------------VNPLKCKIFVGGL 108
+ +HY+ K IDPKR R + K+FVGGL
Sbjct: 227 MVR-EHYLDGKVIDPKRAIPRPQHNQQGGGHHNNYNNGGGGGGGGGSYSASSQKLFVGGL 285
Query: 109 TTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICG 168
+T R +F Q+G++++ D+ +GF F+++ D + + VL V G
Sbjct: 286 PPSVTPATFRTFFEQFGTLSDCTCMMDRETGKPRGFGFLTYADDSSLNHVLNTRPIVFDG 345
Query: 169 KEVDVKRV--KFNPETM 183
KEVDVKR K +P+++
Sbjct: 346 KEVDVKRAQSKNDPQSL 362
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+KLFVGGL + +F Q+G + + D TG+ RGF F+TY +++ +L
Sbjct: 278 QKLFVGGLPPSVTPATFRTFFEQFGTLSDCTCMMDRETGKPRGFGFLTYADDSSLNHVLN 337
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKCKI 103
K++D KR + +P +I
Sbjct: 338 TRPIVFDGKEVDVKRAQSKNDPQSLQI 364
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 63 VTYTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFS 122
+++ TQ A DD + + +D + P + K+F+GGL + TE +R YFS
Sbjct: 132 LSHQTQVA-DDRGEGQNAGTERQGLDNRSAMPHEMPEEGKMFIGGLNWDTTEDSLRRYFS 190
Query: 123 QYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPE 181
Q+G + D +GF F++F D + V+ + + GK +D KR P+
Sbjct: 191 QFGEVGNCAIMRDNMTGRSRGFAFLNFVDPKAVNTVMVR-EHYLDGKVIDPKRAIPRPQ 248
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 97/183 (53%), Gaps = 22/183 (12%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
+D+ KLFVGG+ T E ++ ++F+ YGEV + D TG+ RGF FV ++ +D
Sbjct: 3 SDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDR 62
Query: 74 LLAAGDHYIGNKKIDPKR--------VTKRVNPLKC-------------KIFVGGLTTEI 112
+L H I +++D KR V+ R L KIFVGGL +
Sbjct: 63 VLQE-KHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTL 121
Query: 113 TEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVD 172
T+++ R YF YG +T+ +D++ N +GF F+SFD ++ D VL + GK+V+
Sbjct: 122 TDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVE 181
Query: 173 VKR 175
VKR
Sbjct: 182 VKR 184
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 14 NDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDD 73
N +K+FVGGL ++E YF YG V ++I D T + RGF FV++ ++ AVD
Sbjct: 107 NKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDS 166
Query: 74 LLAAGDHYIGNKKIDPKR-VTKRVNP 98
+L H + K+++ KR + K NP
Sbjct: 167 VLHKTFHDLSGKQVEVKRALPKDANP 192
>gi|431921599|gb|ELK18951.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Pteropus alecto]
Length = 298
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 23 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 82
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 83 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 142
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVL 159
+ D+ K+GF F++FDD + D+++
Sbjct: 143 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 172
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGG+ +T E + DYF QYG++E I I D +G+ RGFAFVT+ +VD ++
Sbjct: 114 KKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI 173
Query: 77 AGDHYI 82
H +
Sbjct: 174 QKYHTV 179
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + VD ++
Sbjct: 41 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMS 100
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++R+YF +YG I
Sbjct: 101 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYFEKYGKIET 160
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 161 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 206
>gi|403309130|ref|XP_003944981.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 385
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+ + + DP T +SRGF FVTY T + VD +
Sbjct: 78 RKLFIGGLSFETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 137
Query: 77 AGDHYIGNKKIDPKRVTKRVNP--------LKCKIFVGGLTTEITEQDVRDYFSQYGSIT 128
A H + + ++PKR R + +K KIFVGG+ + E +RDYF QYG I
Sbjct: 138 ARPHKVDGRVVEPKRAVSRGDSRRPGAHLTVKKKIFVGGIKEDAEEHHLRDYFEQYGKIE 197
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 198 VIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHGCEVRK 244
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 16 ERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLL 75
++K+FVGG+ + E + DYF QYG++E I I D +G+ RGFAFVT+ ++D ++
Sbjct: 169 KKKIFVGGIKEDAEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIV 228
Query: 76 AAGDHYI 82
H +
Sbjct: 229 IQKYHTV 235
>gi|426372865|ref|XP_004053334.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 306
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 139 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 198
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 199 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 258
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVL 159
+ D+ K+GF F++FDD + D+++
Sbjct: 259 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 288
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 102 KIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKN 161
K+F+GGL+ E T++ +R +F Q+G++T+ D + +GF F+++ D +
Sbjct: 140 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNA 199
Query: 162 PKQVICGKEVDVKR 175
+ G+ V+ KR
Sbjct: 200 RPHKVDGRVVEPKR 213
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
DE KLFVGG+ +T E+++ +YF+QYG+V I D TG+ RGF FV + +D +
Sbjct: 4 DEGKLFVGGIPWDTTEEKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAV 63
Query: 75 LAAGDHYIGNKKIDPKRVTKRV---------------------NPLKCKIFVGGLTTEIT 113
L H I + ++ KR R N KIFVGGL + +T
Sbjct: 64 LQE-KHTIDGRTVEAKRALSREEQHTSRPGNSNTGRSSSGMGGNFKTKKIFVGGLPSTLT 122
Query: 114 EQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDV 173
E+ R YF YG +T+ +D++ +GF FISFD ++ D+VL + GK V+V
Sbjct: 123 EEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHKTFHDLNGKLVEV 182
Query: 174 KRV 176
KR
Sbjct: 183 KRA 185
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+FVGGL E+ YF YG V + + D T + RGF F+++ T+ AVD +L
Sbjct: 110 KKIFVGGLPSTLTEEGFRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLH 169
Query: 77 AGDHYIGNKKIDPKR-VTKRVNP 98
H + K ++ KR + K NP
Sbjct: 170 KTFHDLNGKLVEVKRALPKDANP 192
>gi|402864694|ref|XP_003896588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 320
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTEESLRSHFEQWGTLADCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RD F QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDCFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 100/180 (55%), Gaps = 8/180 (4%)
Query: 5 ANGTAGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVT 64
++G + P KLFVGGL T ++ +YF QYG + + + DP T +SRGF F+T
Sbjct: 11 SSGRSTPTDLPHNKLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFIT 70
Query: 65 YTTQKAVDDLLAAGDHYIGNKKIDPKRVTKRVNPLKC-------KIFVGGLTTEITEQDV 117
+ +VD +LA H + KKIDPK T + N K K+FVGG++ + + +V
Sbjct: 71 FAEASSVDRVLAVPAHTLDGKKIDPKHATPK-NKGKATPSSKTKKVFVGGVSQDTSADEV 129
Query: 118 RDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+ YF+Q+G + E D+ +GF F++F+ ++V D++ + I K+V+ K+ +
Sbjct: 130 KAYFNQFGRVEEAVMLMDQQTKRHRGFGFVTFESEDVVDRICEIHYHTIKNKKVECKKAQ 189
>gi|41053816|ref|NP_956789.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|33416839|gb|AAH55499.1| Zgc:66127 [Danio rerio]
Length = 388
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 8/178 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY++ VD +
Sbjct: 15 RKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEVDAAMD 74
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K K+FVGG+ + E+ +R+YF Q+G I E
Sbjct: 75 ARPHKVDGRAVEPKRAVSREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDE 134
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVS 187
+K+ + ++GF FI+FDD + D+++ + G +V++ + E M VS
Sbjct: 135 VNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHTVNGHNCEVRKA-LSREGMNRVS 191
>gi|89269835|emb|CAJ82537.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +R+YF +YG I
Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIES 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ DK K+GF F++FDD + D+++ I G +V++
Sbjct: 129 IEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRK 174
>gi|329112537|ref|NP_001016926.2| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 328
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +R+YF +YG I
Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIES 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ DK K+GF F++FDD + D+++ I G +V++
Sbjct: 129 IEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRK 174
>gi|390465683|ref|XP_003733453.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 TEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|291384352|ref|XP_002708768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|194388148|dbj|BAG65458.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF F TY+ + VD +
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFATYSCVEEVDAAMC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|114577985|ref|XP_001144332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
Length = 320
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFFGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|291389620|ref|XP_002711397.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RD+F QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
>gi|296190480|ref|XP_002743214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Callithrix jacchus]
Length = 320
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIF GG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNCEVRK 179
>gi|397520388|ref|XP_003830301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan paniscus]
Length = 320
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + + DP T +SRGF FVTY + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTACVVMRDPNTKRSRGFEFVTYAAVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRK 179
>gi|329112539|ref|NP_001192271.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 350
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +R+YF +YG I
Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIES 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ DK K+GF F++FDD + D+++ I G +V++
Sbjct: 129 IEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRK 174
>gi|134024345|gb|AAI35351.1| hnrpa2b1 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA 68
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +R+YF +YG I
Sbjct: 69 ARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIES 128
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ DK K+GF F++FDD + D+++ I G +V++
Sbjct: 129 IEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRK 174
>gi|147905111|ref|NP_001081320.1| heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Xenopus
laevis]
gi|1710626|sp|P51992.1|RO32_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 2;
AltName: Full=hnRNP A3(B)
gi|214747|gb|AAA49950.1| ribonucleoprotein [Xenopus laevis]
Length = 385
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 96/186 (51%), Gaps = 7/186 (3%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F Q+G++ + DP T +SRGF FVTY+ + VD ++
Sbjct: 27 RKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMS 86
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF YG I
Sbjct: 87 ARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIET 146
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ I +VK+ E + +
Sbjct: 147 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNCEVKKALSKQEMQTASAQR 206
Query: 190 VRGAGA 195
RG G
Sbjct: 207 GRGGGG 212
>gi|80477437|gb|AAI08267.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
Length = 320
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 TTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ + G +V++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRK 179
>gi|213513508|ref|NP_001134615.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
gi|209734656|gb|ACI68197.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
Length = 339
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +F Q+G + + DP +SRGF FVTY+ + VD +A
Sbjct: 13 RKLFIGGLSFETTEESLRIHFEQWGNLTDSVVMRDPNNKRSRGFGFVTYSCVEEVDACMA 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +R+YF YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSNRPGAHLTVKKIFVGGIKEDTREDHIREYFETYGRIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+++ K+GFCF+SFDD + D+++ I +V++ + M + +
Sbjct: 133 IDIMEERATGKKRGFCFVSFDDNDTVDKIVAQKYHTINSHNCEVRKA-LPKQEMEASNQR 191
Query: 190 VRGAGA 195
RG G+
Sbjct: 192 NRGGGS 197
>gi|410896922|ref|XP_003961948.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Takifugu rubripes]
Length = 336
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 96/178 (53%), Gaps = 8/178 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +F ++G + + +P +SRGF FVTY+ + VD+ +
Sbjct: 13 RKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTYSCLREVDEAMK 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K KIFVGG+ + E +RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKYGKIEC 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVS 187
++S K+GFCF++FDD + D+++ I +V++ + + M ++S
Sbjct: 133 VDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTINLHNCEVRKA-LSKQEMNAIS 189
>gi|430813105|emb|CCJ29521.1| unnamed protein product [Pneumocystis jirovecii]
Length = 397
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 91/158 (57%), Gaps = 2/158 (1%)
Query: 19 LFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAAG 78
+F+GGL+ T ++ + YF Q+GEV ++ D TG+SRGF F+T+ K V+ ++
Sbjct: 1 MFIGGLNWETTDESLRAYFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVMVK- 59
Query: 79 DHYIGNKKIDPKRVTKRVNPLK-CKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKS 137
+HY+ K IDPKR R K K+FVGG++ + TE + R++FS +G + + DK
Sbjct: 60 EHYLDGKIIDPKRAIPREEQEKTAKMFVGGVSQDCTEDEFREFFSAFGRVIDATLMIDKD 119
Query: 138 KNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+GF F++F+ + + P I K+++VKR
Sbjct: 120 TGRPRGFGFVTFESDAAVENAMSQPYLAIHDKQIEVKR 157
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGG+ ++ E E ++FS +G V ++ D TG+ RGF FVT+ + AV++ ++
Sbjct: 84 KMFVGGVSQDCTEDEFREFFSAFGRVIDATLMIDKDTGRPRGFGFVTFESDAAVENAMSQ 143
Query: 78 GDHYIGNKKIDPKRVTKRVN 97
I +K+I+ KR T + N
Sbjct: 144 PYLAIHDKQIEVKRATPKGN 163
>gi|349804307|gb|AEQ17626.1| putative heterogeneous nuclear ribonucleoprotein A3 [Hymenochirus
curtipes]
Length = 249
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F Q+G++ + DP T +SRGF FVTY+ + VD +
Sbjct: 14 RKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMT 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF YG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGYGKIET 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 134 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 179
>gi|395863183|ref|XP_003803782.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A/B-like, partial [Otolemur garnettii]
Length = 482
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 95/166 (57%), Gaps = 7/166 (4%)
Query: 15 DERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDL 74
D K+FVGGL + +K++ DYF+++GE ++K DP TG SRGF F+ + +V+ +
Sbjct: 145 DAGKMFVGGLSWDISKKDLKDYFTKFGENVDCTLKMDPNTGXSRGFGFILFRDAASVEKV 204
Query: 75 LAAGDHYIGNKKIDPKR--VTKRVNPLKCKIF----VGGLTTEITEQDVRDYFSQYGSIT 128
L +H + IDPK+ + +P+K +IF VGGL E TE+ +R+YF +G I
Sbjct: 205 LDQKEHRLDGPVIDPKKAMAAMKKDPVK-RIFVCVCVGGLNPEATEEKIREYFGDFGEIE 263
Query: 129 EFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ P D N + F FI+F ++ +VL+ +I G + +++
Sbjct: 264 AIELPMDPKLNKRXSFVFITFKEEEPVKKVLEKKFHIISGSKCEIE 309
>gi|296194380|ref|XP_002744925.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLKC-------KIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVSREDSQRQGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+ F F++FDD + D+++ + G +V++
Sbjct: 134 TEIMTDRGSGKKRSFAFVTFDDHDTVDKIVIQKYHTVNGHNCEVRK 179
>gi|444523821|gb|ELV13633.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 304
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 13/170 (7%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T E+ + +Y+ Q+G++ + DP + +SRGF FVT+++ VD +A
Sbjct: 37 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 96
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H I + ++PKR R K K+FVGG+ + E +RDYF +YG I
Sbjct: 97 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDT 156
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVI------CGKEVDV 173
+ D+ K+GF F++FDD + D+++ I G EVDV
Sbjct: 157 IEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEMGMEVDV 206
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 89 PKRVTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFIS 148
P KR K+F+GGL+ E TE+ +R+Y+ Q+G +T+ D + +GF F++
Sbjct: 25 PLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVT 84
Query: 149 FDDQNVADQVLKNPKQVICGKEVDVKR 175
F D + I G+ V+ KR
Sbjct: 85 FSSMAEVDAAMAARPHSIDGRVVEPKR 111
>gi|427777107|gb|JAA54005.1| Putative heteroproteinous nuclear ribonucleoprotein at 27c
[Rhipicephalus pulchellus]
Length = 322
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 104/199 (52%), Gaps = 26/199 (13%)
Query: 14 NDER-KLFVGGLHRNTGEKEINDYFSQYGEV-ESISIKNDPYTGQSRGFAFVTYTTQKAV 71
N+E+ K+FVGGL T ++ + +YFS++GEV +S+ + N+ TG+SRGF FVT+ V
Sbjct: 6 NEEQGKIFVGGLSWETTQESLLNYFSRFGEVVDSVVMCNE--TGRSRGFGFVTFRDPSCV 63
Query: 72 DDLLAAGDHYIGNKKIDPKRVTKR----------------------VNPLKCKIFVGGLT 109
+LA G H + + +DPK R KIFVGGL
Sbjct: 64 ATVLAGGPHQLDGRTVDPKSCNPRSASRPGGGGGPGARGGPRGGGGGKGSTTKIFVGGLP 123
Query: 110 TEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGK 169
+TE D+ +FS+YG +TE +D+ + +GF F+SF+ ++ +Q+ I GK
Sbjct: 124 ATVTETDLHAFFSEYGKVTEVLIMYDQEQRRSRGFGFVSFETEDAVNQLTSRRYVEISGK 183
Query: 170 EVDVKRVKFNPETMGSVSG 188
+V+ KR + M + G
Sbjct: 184 QVECKRAEPKESRMANKGG 202
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 92 VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSITEFQQPFDKSKNMKKGFCFISFDD 151
+ +R N + KIFVGGL+ E T++ + +YFS++G + + +++ +GF F++F D
Sbjct: 1 MARRDNEEQGKIFVGGLSWETTQESLLNYFSRFGEVVDSVVMCNET-GRSRGFGFVTFRD 59
Query: 152 QNVADQVLKNPKQVICGKEVDVKRVKFNPET 182
+ VL + G+ VD K NP +
Sbjct: 60 PSCVATVLAGGPHQLDGRTVDPKSC--NPRS 88
>gi|410913984|ref|XP_003970468.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Takifugu rubripes]
Length = 319
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 98/167 (58%), Gaps = 2/167 (1%)
Query: 9 AGPGRNDERKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQ 68
A D K+FVGGL +T +K++ DYF+++GEV +IK D TG+SRGF F+ +
Sbjct: 56 ASKDEEDAGKMFVGGLSWDTSKKDLKDYFNKFGEVTDCTIKMDQGTGRSRGFGFILFKDP 115
Query: 69 KAVDDLLAAGDHYIGNKKIDPKR-VTKRVNPLKCKIFVGGLTTEITEQDVRDYFSQYGSI 127
+V+ +L +H + + IDPKR + + P+K K+FVGGL + +++ + +YF +G I
Sbjct: 116 ASVEKVLEQKEHKLDGRVIDPKRALAMKKEPVK-KVFVGGLNPDTSKEVIHEYFEAFGEI 174
Query: 128 TEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVK 174
+ P D ++GF FI++ ++ + L+N + G + ++K
Sbjct: 175 ENIELPQDPKTEKRRGFVFITYKEEACVKKALENKFHTVGGSKCEIK 221
>gi|291233795|ref|XP_002736841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein at 27C-like
[Saccoglossus kowalevskii]
Length = 540
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 11/171 (6%)
Query: 18 KLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLAA 77
K+FVGGL + + + +F +YGEV I DP T +SRGF FV + V LA
Sbjct: 9 KIFVGGLSWESTQDSLQKHFMKYGEVIDCVIMKDPITQRSRGFGFVKFKDPVCVQTALAG 68
Query: 78 GDHYIGNKKIDPKRVTKRVNPLKC-----------KIFVGGLTTEITEQDVRDYFSQYGS 126
H + + IDPK T R K K+F+GG+ E D+ ++FSQ+G
Sbjct: 69 APHILDGRTIDPKPCTPRSQQQKTQQMGQFSGRVKKVFIGGIPPNCNEDDINNFFSQFGQ 128
Query: 127 ITEFQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVK 177
+TEF +D+ + +GF F+SF+ +++ ++V I GK V+ K+ +
Sbjct: 129 VTEFIMMYDQQQKRPRGFGFLSFESEDIVEKVCTIRYHTINGKTVECKKAE 179
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
+K+F+GG+ N E +IN++FSQ+G+V + D + RGF F+++ ++ V+ +
Sbjct: 103 KKVFIGGIPPNCNEDDINNFFSQFGQVTEFIMMYDQQQKRPRGFGFLSFESEDIVEKVCT 162
Query: 77 AGDHYIGNKKIDPKRVTKR 95
H I K ++ K+ R
Sbjct: 163 IRYHTINGKTVECKKAEPR 181
>gi|148707568|gb|EDL39515.1| mCG1047313 [Mus musculus]
Length = 316
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + ++F ++G + + DP T +SRGF FVTY+ + V L
Sbjct: 13 RKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVAAALC 72
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + +K KIFVGG+ + E ++RDYF +YG I
Sbjct: 73 ARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIET 132
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
+ D+ K+GF F++FDD + D+++ I G +VK+
Sbjct: 133 IEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKK 178
>gi|156549026|ref|XP_001607355.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Nasonia vitripennis]
Length = 371
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 88/166 (53%), Gaps = 7/166 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL T + + +F Q+G++ + + DP T +SRGF F+TY+ VDD
Sbjct: 17 RKLFIGGLDYRTTDDSLKKHFEQWGDIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQN 76
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + K+FVGGL + E D+R YF YG+I
Sbjct: 77 ARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEDDLRVYFQGYGNINS 136
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKR 175
DK K+GF F+ FDD + D++ I GK VDVK+
Sbjct: 137 VSIVTDKDTGKKRGFGFVEFDDYDPVDKICLQRNHQIRGKHVDVKK 182
>gi|291384354|ref|XP_002708769.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 17 RKLFVGGLHRNTGEKEINDYFSQYGEVESISIKNDPYTGQSRGFAFVTYTTQKAVDDLLA 76
RKLF+GGL ++ + +F Q+G + + DP T +SRGF FVTY T + VD +
Sbjct: 14 RKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73
Query: 77 AGDHYIGNKKIDPKRVTKRVNPLK-------CKIFVGGLTTEITEQDVRDYFSQYGSITE 129
A H + + ++PKR R + + KIFVGG+ + E +RDYF QYG I
Sbjct: 74 ARPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 130 FQQPFDKSKNMKKGFCFISFDDQNVADQVLKNPKQVICGKEVDVKRVKFNPETMGSVSGA 189
+ D+ K+GF F++FDD + D+++ + G +V++ + + M S S
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA-LSKQEMASASST 192
Query: 190 VR 191
R
Sbjct: 193 PR 194
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,028,650,015
Number of Sequences: 23463169
Number of extensions: 260550662
Number of successful extensions: 841613
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13501
Number of HSP's successfully gapped in prelim test: 7420
Number of HSP's that attempted gapping in prelim test: 780508
Number of HSP's gapped (non-prelim): 50603
length of query: 348
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 205
effective length of database: 9,003,962,200
effective search space: 1845812251000
effective search space used: 1845812251000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)