BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17571
(151 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CS4|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And
Mg
pdb|1U0H|A Chain A, Structural Basis For The Inhibition Of Mammalian Adenylyl
Cyclase By Mant-gtp
pdb|2GVD|A Chain A, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With Tnp-Atp And Mn
pdb|2GVZ|A Chain A, Crystal Structure Of Complex Of Gs- With The Catalytic
Domains Of Mammalian Adenylyl Cyclase: Complex With
Mant- Atp And Mn
pdb|3C14|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Ca
pdb|3C15|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Mg
pdb|3C16|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Adenosine-5'-Triphosphate And Ca
pdb|3G82|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Mant-Itp And Mn
pdb|3MAA|A Chain A, Complex Of Gs-alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5-o-(l-thiophosphate) And Low Ca Concentration
Length = 225
Score = 132 bits (331), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 68/82 (82%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
MR+GIHSG V CGVLGLRKWQFDVWS DVTLANH+EAGG GR+HI++ATL L YEV
Sbjct: 128 MRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEV 187
Query: 61 EPGYGDTRDSYLKEHQVETFLI 82
EPG G R++YLKEH +ETFLI
Sbjct: 188 EPGCGGERNAYLKEHSIETFLI 209
>pdb|1CJK|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn
pdb|1CJT|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mn, And Mg
pdb|1CJU|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp And Mg
pdb|1CJV|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mg, And Zn
pdb|1CUL|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg
pdb|1TL7|A Chain A, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With 2'(3')-O-(N-
Methylanthraniloyl)-Guanosine 5'-Triphosphate And Mn
Length = 217
Score = 132 bits (331), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 68/82 (82%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
MR+GIHSG V CGVLGLRKWQFDVWS DVTLANH+EAGG GR+HI++ATL L YEV
Sbjct: 120 MRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEV 179
Query: 61 EPGYGDTRDSYLKEHQVETFLI 82
EPG G R++YLKEH +ETFLI
Sbjct: 180 EPGCGGERNAYLKEHSIETFLI 201
>pdb|1AZS|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase
Length = 220
Score = 132 bits (331), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 68/82 (82%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
MR+GIHSG V CGVLGLRKWQFDVWS DVTLANH+EAGG GR+HI++ATL L YEV
Sbjct: 128 MRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEV 187
Query: 61 EPGYGDTRDSYLKEHQVETFLI 82
EPG G R++YLKEH +ETFLI
Sbjct: 188 EPGCGGERNAYLKEHSIETFLI 209
>pdb|3UVJ|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1.
pdb|3UVJ|C Chain C, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1
Length = 225
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 4/64 (6%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
MRIG+HSGSV GV+G++ ++ ++ +VTLAN E+ +P ++++S T L++
Sbjct: 108 MRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRLLKDC--- 164
Query: 61 EPGY 64
PG+
Sbjct: 165 -PGF 167
>pdb|3ET6|B Chain B, The Crystal Structure Of The Catalytic Domain Of A
Eukaryotic Guanylate Cyclase
Length = 190
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCL--QEMY 58
+R+G+HSG V+ GV+G + +F ++ V A+ +E+ G G++HIS A CL +E +
Sbjct: 104 IRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQIHISEACYXCLRSKERF 163
Query: 59 EV 60
E+
Sbjct: 164 EI 165
>pdb|3ET6|A Chain A, The Crystal Structure Of The Catalytic Domain Of A
Eukaryotic Guanylate Cyclase
Length = 190
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCL--QEMY 58
+R+G+HSG V+ GV+G + +F ++ V A+ +E+ G G++HIS A CL +E +
Sbjct: 104 IRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQIHISEACYCCLRSKERF 163
Query: 59 EV 60
E+
Sbjct: 164 EI 165
>pdb|1AB8|A Chain A, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX
pdb|1AB8|B Chain B, Rat Type Ii Adenylyl Cyclase C2 DomainFORSKOLIN COMPLEX
Length = 220
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEM 57
+R+GI+ G V+ GV+G +K Q+D+W V +A+ +++ G+ ++ ++ T LQ +
Sbjct: 126 LRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL 182
>pdb|1CUL|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2',5'-Dideoxy-Adenosine 3'- Triphosphate And Mg
Length = 208
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEM 57
+R+GI+ G V+ GV+G +K Q+D+W V +A+ +++ G+ ++ ++ T LQ +
Sbjct: 123 LRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL 179
>pdb|1AZS|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase
pdb|1CJK|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5'-(Alpha Thio)-Triphosphate (Rp), Mg, And Mn
pdb|1CJT|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mn, And Mg
pdb|1CJU|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp And Mg
pdb|1CJV|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mg, And Zn
pdb|1CS4|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And
Mg
pdb|1TL7|B Chain B, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With 2'(3')-O-(N-
Methylanthraniloyl)-Guanosine 5'-Triphosphate And Mn
pdb|1U0H|B Chain B, Structural Basis For The Inhibition Of Mammalian Adenylyl
Cyclase By Mant-gtp
pdb|2GVD|B Chain B, Complex Of Gs- With The Catalytic Domains Of Mammalian
Adenylyl Cyclase: Complex With Tnp-Atp And Mn
pdb|2GVZ|B Chain B, Crystal Structure Of Complex Of Gs- With The Catalytic
Domains Of Mammalian Adenylyl Cyclase: Complex With
Mant- Atp And Mn
pdb|3C14|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Ca
pdb|3C15|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Pyrophosphate
And Mg
pdb|3C16|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Adenosine-5'-Triphosphate And Ca
pdb|3G82|B Chain B, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Mant-Itp And Mn
pdb|3MAA|B Chain B, Complex Of Gs-alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5-o-(l-thiophosphate) And Low Ca Concentration
Length = 212
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEM 57
+R+GI+ G V+ GV+G +K Q+D+W V +A+ +++ G+ ++ ++ T LQ +
Sbjct: 127 LRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTL 183
>pdb|3UVJ|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1.
pdb|3UVJ|D Chain D, Crystal Structure Of The Catalytic Domain Of The
Heterodimeric Human Soluble Guanylate Cyclase 1
Length = 220
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
+ IGIH+G V+ GV+G R ++ ++ V L + E G G++++S T CL
Sbjct: 113 ITIGIHTGEVVTGVIGQRMPRYSLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENS 172
Query: 61 EPGYGDTRDSYLKEHQVETFLIKSQEPTKIRRGRFHTMISRSRLWSEDSGAQQDSRN 117
+P + EH+ + +EP ++ +SR +E++ D+ N
Sbjct: 173 DP-------QFHLEHRGPVSMKGKKEPMQVW------FLSRKNTGTEETKQDDDAEN 216
>pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble
Guanylate Cyclase 1 Beta 3.
pdb|2WZ1|B Chain B, Structure Of The Catalytic Domain Of Human Soluble
Guanylate Cyclase 1 Beta 3
Length = 219
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
+ IGIH+G V+ GV+G R ++ ++ V L + E G G++++S T CL
Sbjct: 112 ITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENS 171
Query: 61 EPGYGDTRDSYLKEHQVETFLIKSQEPTKIRRGRFHTMISRSRLWSEDSGAQQDSRN 117
+P + EH+ + +EP ++ +SR +E++ D+ N
Sbjct: 172 DP-------QFHLEHRGPVSMKGKKEPMQVW------FLSRKNTGTEETKQDDDAEN 215
>pdb|1YK9|A Chain A, Crystal Structure Of A Mutant Form Of The Mycobacterial
Adenylyl Cyclase Rv1625c
Length = 204
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 36/58 (62%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMY 58
+R+G+ +G V+ GV+G R++++ VW V +A+ +E+ G++ + + L++ +
Sbjct: 104 LRVGLATGPVVAGVVGSRRFRYCVWGDAVNVASRMESTDSVGQIQVPDEVYERLKDDF 161
>pdb|2IRU|A Chain A, Crystal Structure Of The Polymerase Domain From
Mycobacterium Tuberculosis Ligase D
pdb|2IRU|B Chain B, Crystal Structure Of The Polymerase Domain From
Mycobacterium Tuberculosis Ligase D
pdb|2IRX|A Chain A, Crystal Structure Of The Polymerase Domain From
Mycobacterium Tuberculosis Ligase D With Gtp And
Manganese.
pdb|2IRY|A Chain A, Crystal Structure Of The Polymerase Domain From
Mycobacterium Tuberculosis Ligase D With Dgtp And
Manganese.
pdb|2IRY|B Chain B, Crystal Structure Of The Polymerase Domain From
Mycobacterium Tuberculosis Ligase D With Dgtp And
Manganese.
pdb|2R9L|A Chain A, Polymerase Domain From Mycobacterium Tuberculosis Ligase D
In Complex With Dna
pdb|2R9L|B Chain B, Polymerase Domain From Mycobacterium Tuberculosis Ligase D
In Complex With Dna
pdb|3PKY|A Chain A, Polymerase Domain From Mycobacterium Tuberculosis Ligase D
In Complex With Dna, Utp And Manganese.
pdb|3PKY|B Chain B, Polymerase Domain From Mycobacterium Tuberculosis Ligase D
In Complex With Dna, Utp And Manganese
Length = 303
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 92 RGRFHTMISRSRLWSE--DSGAQQDSRNSVSSQGASSGDILDQ 132
RGR H ++ R W+E D +Q S + V ++ A GD+L++
Sbjct: 247 RGRTHPTVAAPRTWAELDDPALRQLSYDEVLTRIARDGDLLER 289
>pdb|1AY1|H Chain H, Anti Taq Fab Tp7
pdb|1BGX|H Chain H, Taq Polymerase In Complex With Tp7, An Inhibitory Fab
Length = 213
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 20 WQFDVWSYDVTL---ANHLEAGGIPGRVHISRATLDCLQEMYEVEP 62
W FDVW TL + A + +S TL CL + Y EP
Sbjct: 104 WYFDVWGQGTTLTVSSAKTTAPSVYPLAPVSSVTLGCLVKGYFPEP 149
>pdb|2OT2|A Chain A, Solution Structure Of Hypc
Length = 90
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/19 (57%), Positives = 14/19 (73%)
Query: 47 SRATLDCLQEMYEVEPGYG 65
+R TLD LQ M++VEP G
Sbjct: 64 ARDTLDALQNMFDVEPDVG 82
>pdb|2DVL|A Chain A, Crystal Structure Of Project Tt0160 From Thermus
Thermophilus Hb8
pdb|2DVL|B Chain B, Crystal Structure Of Project Tt0160 From Thermus
Thermophilus Hb8
Length = 372
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 37 AGGIPGRVHISRATLDCLQEMYEVEPGYGDTRDSY---LKEHQVETFLI 82
AG GRV ++ + + +E+ Y + R+ + LKEHQ F I
Sbjct: 230 AGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFKI 278
>pdb|3ODM|A Chain A, Archaeal-Type Phosphoenolpyruvate Carboxylase
pdb|3ODM|B Chain B, Archaeal-Type Phosphoenolpyruvate Carboxylase
pdb|3ODM|C Chain C, Archaeal-Type Phosphoenolpyruvate Carboxylase
pdb|3ODM|D Chain D, Archaeal-Type Phosphoenolpyruvate Carboxylase
pdb|3ODM|E Chain E, Archaeal-Type Phosphoenolpyruvate Carboxylase
pdb|3ODM|F Chain F, Archaeal-Type Phosphoenolpyruvate Carboxylase
pdb|3ODM|G Chain G, Archaeal-Type Phosphoenolpyruvate Carboxylase
pdb|3ODM|H Chain H, Archaeal-Type Phosphoenolpyruvate Carboxylase
Length = 560
Score = 26.6 bits (57), Expect = 5.4, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 1 MRIGIHSG--SVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMY 58
M G+ SG SVL V G KW + VT++ L G +P R H S +D + Y
Sbjct: 228 MSYGLISGVLSVLMAVDGAYKWG---EKHGVTISPILGCGSLPFRGHFSEENIDEILATY 284
>pdb|3A64|A Chain A, Crystal Structure Of Cccel6c, A Glycoside Hydrolase Family
6 Enzyme, From Coprinopsis Cinerea
pdb|3A9B|A Chain A, Cccel6c, A Glycoside Hydrolase Family 6 Enzyme, Complexed
With Cellobiose
pdb|3ABX|A Chain A, Cccel6c, A Glycoside Hydrolase Family 6 Enzyme, Complexed
With P-Nitrophenyl Beta-D-Cellotrioside
Length = 395
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 22 FDVWSYDVTLANHLEAGGIPGR 43
+D W+Y TL HL+A G P +
Sbjct: 256 YDEWNYVKTLTPHLQAVGFPAQ 277
>pdb|3VOF|A Chain A, Cellobiohydrolase Mutant, Cccel6c D102a, In The Closed
Form
Length = 395
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 22 FDVWSYDVTLANHLEAGGIPGR 43
+D W+Y TL HL+A G P +
Sbjct: 256 YDEWNYVKTLTPHLQAVGFPAQ 277
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,793,868
Number of Sequences: 62578
Number of extensions: 180512
Number of successful extensions: 445
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 428
Number of HSP's gapped (non-prelim): 22
length of query: 151
length of database: 14,973,337
effective HSP length: 90
effective length of query: 61
effective length of database: 9,341,317
effective search space: 569820337
effective search space used: 569820337
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.7 bits)