RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy17571
(151 letters)
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing
protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A
{Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A*
1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A*
3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A*
1tl7_A*
Length = 220
Score = 151 bits (384), Expect = 3e-47
Identities = 60/92 (65%), Positives = 69/92 (75%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
MR+GIHSG V CGVLGLRKWQFDVWS DVTLANH+EAGG GR+HI++ATL L YEV
Sbjct: 128 MRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEV 187
Query: 61 EPGYGDTRDSYLKEHQVETFLIKSQEPTKIRR 92
EPG G R++YLKEH +ETFLI +
Sbjct: 188 EPGCGGERNAYLKEHSIETFLILRCTQKRKEE 219
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics,
PSI, protein structure initiative; 2.70A {Mycobacterium
tuberculosis}
Length = 204
Score = 92.3 bits (230), Expect = 3e-24
Identities = 15/62 (24%), Positives = 37/62 (59%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
+R+G+ +G V+ GV+G R++++ VW V +A+ +E+ G++ + + L++ + +
Sbjct: 104 LRVGLATGPVVAGVVGSRRFRYCVWGDAVNVASRMESTDSVGQIQVPDEVYERLKDDFVL 163
Query: 61 EP 62
Sbjct: 164 RE 165
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural
genomics, structural genomics conso SGC, CGMP
biosynthesis; 2.08A {Homo sapiens}
Length = 225
Score = 84.3 bits (209), Expect = 4e-21
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEM--Y 58
MRIG+HSGSV GV+G++ ++ ++ +VTLAN E+ +P ++++S T L++ +
Sbjct: 108 MRIGLHSGSVFAGVVGVKMPRYCLFGNNVTLANKFESCSVPRKINVSPTTYRLLKDCPGF 167
Query: 59 EVEP 62
P
Sbjct: 168 VFTP 171
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1,
metal-binding, CGMP biosynthesis, nucleotide-B cyclase,
GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Length = 219
Score = 80.9 bits (200), Expect = 7e-20
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
+ IGIH+G V+ GV+G R ++ ++ V L + E G G++++S T CL
Sbjct: 112 ITIGIHTGEVVTGVIGQRMPRYCLFGNTVNLTSRTETTGEKGKINVSEYTYRCLMSPENS 171
Query: 61 EPGY 64
+P +
Sbjct: 172 DPQF 175
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic,
lyase, membrane, transmembrane; 2.55A {Chlamydomonas
reinhardtii} PDB: 3et6_B
Length = 190
Score = 73.9 bits (182), Expect = 2e-17
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEM--Y 58
+R+G+HSG V+ GV+G + +F ++ V A+ +E+ G G++HIS A CL+ +
Sbjct: 104 IRVGMHSGPVVAGVVGRKMPRFXLFGDTVNTASRMESHGEAGQIHISEACYCCLRSKERF 163
Query: 59 EVEP 62
E+
Sbjct: 164 EIRE 167
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK;
2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B*
1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B*
2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B*
3maa_B* 1cul_B*
Length = 220
Score = 68.4 bits (168), Expect = 4e-15
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEM-YE 59
+R+GI+ G V+ GV+G +K Q+D+W V +A+ +++ G+ ++ ++ T LQ + Y
Sbjct: 126 LRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYT 185
Query: 60 VEP 62
Sbjct: 186 CTC 188
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes,
adenylyl cyclases, monomer-dimer, catalysis, lyase;
1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Length = 235
Score = 54.9 bits (132), Expect = 5e-10
Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
+R+GIH+G + K +D + +A E+ G+V ++ A L
Sbjct: 134 VRVGIHTGLCDIRHDEVTK-GYDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRK 192
Query: 61 EPGYGDTRDSYLK--EHQVETFLIKS 84
+ D L+ V+ + + +
Sbjct: 193 QIDVTALGDVALRGVSDPVKMYQLNT 218
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase;
HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB:
1y11_A*
Length = 407
Score = 53.4 bits (128), Expect = 3e-09
Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 10/96 (10%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
+R G+ SG + D + V +A+ + PG V ++ + + L + E
Sbjct: 297 LRAGVASGMAVSRA-------GDWFGSPVNVASRVTGVARPGAVLVADSVREALGDAPEA 349
Query: 61 EP-GYGDTRDSYLK--EHQVETFLIKSQEPTKIRRG 93
+ + L+ V F ++ G
Sbjct: 350 DGFQWSFAGPRRLRGIRGDVRLFRVRRGATRTGSGG 385
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology
domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis}
PDB: 1ybu_A*
Length = 184
Score = 44.6 bits (106), Expect = 2e-06
Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 8/93 (8%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
+RIGIH+G V DV V + + A P V +S D +
Sbjct: 98 VRIGIHAGEVEVRDASHG---TDVAGVAVHIGARVCALAGPSEVLVSSTVRDIVAGS--- 151
Query: 61 EPGYGDTRDSYLK--EHQVETFLIKSQEPTKIR 91
+ + + LK + ++ + T+ R
Sbjct: 152 RHRFAERGEQELKGVPGRWRLCVLMRDDATRTR 184
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa}
Length = 198
Score = 37.9 bits (89), Expect = 3e-04
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSY-----DVTLANHLEAGGIPGRVHISRATLDCLQ 55
+R+GI++G G G + D Y +V LA+ LE+ G + IS T ++
Sbjct: 110 IRMGINTGYCTVGNFGADT-RMD---YTIIGREVNLASRLESASEAGEILISHETYSLIK 165
Query: 56 EMYEVEP 62
++
Sbjct: 166 DVIMCRD 172
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase,
lyase; 2.31A {Synechocystis SP}
Length = 208
Score = 37.5 bits (88), Expect = 5e-04
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 9/67 (13%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSY-----DVTLANHLEAGGIPGRVHISRATLDCLQ 55
M IGI++G V+ G +G K + Y V L +E+ G++ IS TL+
Sbjct: 112 MGIGINTGEVVVGNIGSEK-RTK---YGVVGAQVNLTYRIESYTTGGQIFISSTTLEAAG 167
Query: 56 EMYEVEP 62
+ V
Sbjct: 168 DRVHVNG 174
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family;
alpha-beta fold, structural genomics, PSI-2, protein
structu initiative; 2.60A {Ruegeria pomeroyi}
Length = 189
Score = 34.9 bits (81), Expect = 0.004
Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 11/94 (11%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
RIGI+ G ++ D++ V +A LEA PG + +S Q+
Sbjct: 96 YRIGINIGDIVLE-------DGDIFGDAVNVAARLEAISEPGAICVSDIVHQITQDRVSE 148
Query: 61 EPGYGDTRDSYLK--EHQVETFLIKSQEPTKIRR 92
+ D +K + +
Sbjct: 149 P--FTDLGLQKVKNITRPIRVWQWVPDADRDQSH 180
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase;
HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1
PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Length = 219
Score = 34.9 bits (81), Expect = 0.005
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Query: 1 MRIGIHSGSVLCGVLGLRKWQFDVWSY-----DVTLANHLEAGGIPGRVHISRATLDCLQ 55
R GIH G + G+ G ++ + D + V +A L+ P + +S +
Sbjct: 133 FRCGIHQGMAVVGLFGSQE-RSD---FTAIGPSVNIAARLQEATAPNSIMVSAMVAQYVP 188
Query: 56 EMYEVEPG 63
+ ++
Sbjct: 189 DEEIIKRE 196
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot
phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A
{Homo sapiens} SCOP: a.211.1.2
Length = 365
Score = 29.0 bits (65), Expect = 0.58
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 11/75 (14%)
Query: 6 HSGSVLCGVLGLRKWQFDVWSYDVTLANH---------LEAGGIPGRVHISRATLDCLQE 56
+S +VL + L W FDV+S + +H L + R I L
Sbjct: 9 YSTAVLNCLKNLDLWCFDVFSLNQAADDHALRTIVFELLTRHNLISRFKIPTVFLMSF-- 66
Query: 57 MYEVEPGYGDTRDSY 71
+ +E GYG ++ Y
Sbjct: 67 LDALETGYGKYKNPY 81
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic
phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A
{Homo sapiens} PDB: 3g3n_A*
Length = 353
Score = 29.0 bits (65), Expect = 0.66
Identities = 8/59 (13%), Positives = 18/59 (30%), Gaps = 11/59 (18%)
Query: 17 LRKWQFDVWSYDVTLANH---------LEAGGIPGRVHISRATLDCLQEMYEVEPGYGD 66
+ W FD++ +D + G+ H+ L + ++ Y
Sbjct: 22 VGNWNFDIFLFDRLTNGNSLVSLTFHLFSLHGLIEYFHLDMMKLRRF--LVMIQEDYHS 78
>3dyn_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A;
phophodiestrase, enzyme mechanism, hydrolase, manganes
binding, phosphoprotein; HET: PCG IBM; 2.10A {Homo
sapiens} SCOP: a.211.1.2 PDB: 3dyl_A* 3dy8_A* 3dyq_A*
3dys_A* 3jsi_A* 3jsw_A* 2yy2_A* 2hd1_A* 3k3e_A* 3k3h_A*
3n3z_A*
Length = 329
Score = 28.2 bits (63), Expect = 1.0
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 17 LRKWQFDVWSYD----VTLANHL-EAGGIPGRVHISRATLDCLQEMYEVEPGYGD 66
LRK FDVW ++ ++ H+ G+ I+ TL ++ V Y +
Sbjct: 19 LRKPTFDVWLWEPNEMLSCLEHMYHDLGLVRDFSINPVTLRRW--LFCVHDNYRN 71
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 27.9 bits (61), Expect = 1.4
Identities = 22/165 (13%), Positives = 51/165 (30%), Gaps = 34/165 (20%)
Query: 6 HSGSVLCGVLGLRKWQFDVWSYDVTLANHLE---AGGI----PGRVHISRATLDCLQEMY 58
++ GVLG K + DV L+ ++ I + L+ LQ++
Sbjct: 150 AKNVLIDGVLGSGKT---WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLL 206
Query: 59 -EVEPGYGDTRDSYLKEHQVETFLIKSQEPTKIRRGRFHTMISRSRL-----WSE----- 107
+++P + D H L ++RR L +
Sbjct: 207 YQIDPNWTSRSD-----HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 108 -DSGAQ-----QDSR--NSVSSQGASSGDILDQKSGTYQDKTRSI 144
+ + + + + +S+ + + D+ +S+
Sbjct: 262 FNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306
>3qi3_A High affinity CGMP-specific 3',5'-cyclic phosphod 9A; mutation,
glutamine switch, hydrolase-hydrolase inhibitor CO; HET:
PDB; 2.30A {Homo sapiens} PDB: 3qi4_A*
Length = 533
Score = 27.3 bits (60), Expect = 2.5
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 17 LRKWQFDVWSYD----VTLANHL-EAGGIPGRVHISRATLDCLQEMYEVEPGYGD 66
LRK FDVW ++ ++ H+ G+ I+ TL ++ V Y +
Sbjct: 196 LRKPTFDVWLWEPNEMLSCLEHMYHDLGLVRDFSINPVTLRRW--LFCVHDNYRN 248
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken
structural genomics/proteom initiative, RSGI, structural
genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1
b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A*
Length = 821
Score = 27.1 bits (61), Expect = 2.5
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 8/27 (29%)
Query: 87 PTKIRRGRFHTM--------ISRSRLW 105
P I+ GR+ +SR+R W
Sbjct: 426 PPHIKEGRYGEWLKNLVDWALSRNRYW 452
>1tbf_A CGMP-specific 3',5'-cyclic phosphodiesterase; PDE5A, hydrolase;
HET: VIA; 1.30A {Homo sapiens} SCOP: a.211.1.2 PDB:
1t9s_A* 1xoz_A* 1xp0_A* 2chm_A* 3tge_A* 3tgg_A* 3hc8_A*
3hdz_A* 1t9r_A* 3sie_A* 3shy_A* 3shz_A* 3b2r_A* 2h44_A*
2h42_A* 2h40_A* 1rkp_A* 1udt_A* 1udu_A* 1uho_A* ...
Length = 347
Score = 26.6 bits (59), Expect = 3.1
Identities = 5/55 (9%), Positives = 13/55 (23%), Gaps = 7/55 (12%)
Query: 15 LGLRKWQFDVWSYD----VTLANHL-EAGGIPGRVHISRATLDCLQEMYEVEPGY 64
L + + F + + + + L + V+ Y
Sbjct: 42 LKITDFSFSDFELSDLETALCTIRMFTDLNLVQNFQMKHEVLCRW--ILSVKKNY 94
>1y2k_A DPDE3, PDE43, CAMP-specific 3',5'-cyclic phosphodiesterase 4D;
PDE4D, pyrazole, hydrolase; HET: 7DE; 1.36A {Homo
sapiens} SCOP: a.211.1.2 PDB: 1xon_A* 1xoq_A* 1xom_A*
1xor_A* 1y2c_A* 1y2d_A* 1y2e_A* 1y2b_A* 3iak_A* 3k4s_A*
1tbb_A* 1tb7_A* 3sl5_A* 3sl4_A* 2fm5_A* 3sl3_A* 2fm0_A*
3sl6_A* 3sl8_A* 1oyn_A* ...
Length = 349
Score = 26.7 bits (59), Expect = 3.3
Identities = 9/58 (15%), Positives = 15/58 (25%), Gaps = 11/58 (18%)
Query: 16 GLRKWQFDVWSYDVTLANH---------LEAGGIPGRVHISRATLDCLQEMYEVEPGY 64
+ KW V+ N + + I TL + +E Y
Sbjct: 34 DVNKWGLHVFRIAELSGNRPLTVIMHTIFQERDLLKTFKIPVDTLITY--LMTLEDHY 89
>3ecm_A High affinity CAMP-specific and IBMX-insensitive 3',5'-cyclic
phosphodiesterase 8A...; phosphodiesterase 8A PDE8A
inhibitor selectivity; 1.90A {Homo sapiens} PDB:
3ecn_A*
Length = 338
Score = 26.7 bits (59), Expect = 3.7
Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 11/57 (19%)
Query: 17 LRKWQFDVWSYDVTLANH---------LEAGGIPGRVHISRATLDCLQEMYEVEPGY 64
W FD++ + N GI +H S +TL + +E Y
Sbjct: 14 EEYWDFDIFELEAATHNRPLIYLGLKMFARFGICEFLHCSESTLRSW--LQIIEANY 68
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF
superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Length = 282
Score = 26.0 bits (56), Expect = 6.1
Identities = 10/44 (22%), Positives = 16/44 (36%)
Query: 63 GYGDTRDSYLKEHQVETFLIKSQEPTKIRRGRFHTMISRSRLWS 106
Y D H+ T+ + + + HTMI RL +
Sbjct: 50 VYEDPAHRENFSHRDSTYREEVRNEGRDWPANAHTMIGIKRLEN 93
>2r8q_A Class I phosphodiesterase PDEB1; leishimaniasis, parasite
inhibitor selectivity, CAMP phosphodiesterase,
hydrolase; HET: IBM; 1.50A {Leishmania major}
Length = 359
Score = 25.3 bits (55), Expect = 8.8
Identities = 7/61 (11%), Positives = 17/61 (27%), Gaps = 13/61 (21%)
Query: 17 LRKWQFDVWSYDVTLANHLEAG-----------GIPGRVHISRATLDCLQEMYEVEPGYG 65
F+++ + ++A G+P + TL + + Y
Sbjct: 38 FTSPGFNLFEVREKYSEPMDAAAGVVYNLLWNSGLPEKFGCREQTLLNF--ILQCRRRYR 95
Query: 66 D 66
Sbjct: 96 R 96
>3v93_A Cyclic nucleotide specific phosphodiesterase; parasite,
phosphodiesterases,, hydrolase; 2.00A {Trypanosoma
cruzi} PDB: 3v94_A*
Length = 345
Score = 25.5 bits (56), Expect = 8.9
Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 11/69 (15%)
Query: 6 HSGSVLCGVLGLRKWQFDVWSYD-------VTLANHLEAGGIPGRVHISRATLDCLQE-M 57
S + + + LR W FD + ++A H+ + S+ +
Sbjct: 30 KSCAAIGTDVDLRDWGFDTFEVASRVPSVLQSVAMHV---ALAWDFFASQEEAQKWAFLV 86
Query: 58 YEVEPGYGD 66
VE Y
Sbjct: 87 AAVENNYRP 95
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine
nucleotide exchange factor (GEF), GS histones, nucleus,
cell cycle; 1.90A {Saccharomyces cerevisiae}
Length = 473
Score = 25.5 bits (56), Expect = 9.5
Identities = 8/57 (14%), Positives = 20/57 (35%)
Query: 63 GYGDTRDSYLKEHQVETFLIKSQEPTKIRRGRFHTMISRSRLWSEDSGAQQDSRNSV 119
G G D +++ + + G ++ +L ED+ + D + +
Sbjct: 410 GLGPFEDDTEVPTRIKNTATQDHNIILVGCGGQFSVSGGVKLSDEDAEKRADEMDDL 466
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.316 0.134 0.399
Gapped
Lambda K H
0.267 0.0651 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,271,454
Number of extensions: 120756
Number of successful extensions: 292
Number of sequences better than 10.0: 1
Number of HSP's gapped: 285
Number of HSP's successfully gapped: 33
Length of query: 151
Length of database: 6,701,793
Length adjustment: 85
Effective length of query: 66
Effective length of database: 4,328,508
Effective search space: 285681528
Effective search space used: 285681528
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.4 bits)