RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy17571
         (151 letters)



>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis
           familiaris) [TaxId: 9615]}
          Length = 190

 Score = 69.6 bits (169), Expect = 4e-16
 Identities = 60/82 (73%), Positives = 68/82 (82%)

Query: 1   MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
           MR+GIHSG V CGVLGLRKWQFDVWS DVTLANH+EAGG  GR+HI++ATL  L   YEV
Sbjct: 108 MRVGIHSGRVHCGVLGLRKWQFDVWSNDVTLANHMEAGGKAGRIHITKATLSYLNGDYEV 167

Query: 61  EPGYGDTRDSYLKEHQVETFLI 82
           EPG G  R++YLKEH +ETFLI
Sbjct: 168 EPGCGGERNAYLKEHSIETFLI 189


>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis
           [TaxId: 118562]}
          Length = 197

 Score = 52.7 bits (125), Expect = 7e-10
 Identities = 16/84 (19%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 1   MRIGIHSGSVLCGVLGL-RKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYE 59
            R GIH G  + G+ G   +  F      V +A  L+    P  + +S      + +   
Sbjct: 113 FRCGIHQGMAVVGLFGSQERSDFTAIGPSVNIAARLQEATAPNSIMVSAMVAQYVPDEEI 172

Query: 60  VEPGYGDTRDSYLKEHQVETFLIK 83
           ++  + + +     +  V T +I 
Sbjct: 173 IKREFLELKG---IDEPVMTCVIN 193


>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat
           (Rattus norvegicus) [TaxId: 10116]}
          Length = 199

 Score = 49.9 bits (118), Expect = 9e-09
 Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 1   MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEM-YE 59
           +R+GI+ G V+ GV+G +K Q+D+W   V +A+ +++ G+  ++ ++  T   LQ + Y 
Sbjct: 118 LRVGINHGPVIAGVIGAQKPQYDIWGNTVNVASRMDSTGVLDKIQVTEETSLILQTLGYT 177

Query: 60  VEP 62
              
Sbjct: 178 CTC 180


>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase
           {Trypanosome (Trypanosoma brucei), different isoform
           [TaxId: 5691]}
          Length = 235

 Score = 48.8 bits (115), Expect = 3e-08
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 1   MRIGIHSGSVLCGVLGLRKWQFDVWSYDVTLANHLEAGGIPGRVHISRATLDCLQEMYEV 60
           +R+GIH+G        + K  +D +     +A   E+    G+V ++ A    L      
Sbjct: 134 VRVGIHTGLCDIRHDEVTKG-YDYYGRTPNMAARTESVANGGQVLMTHAAYMSLSAEDRK 192

Query: 61  EPGYGDTRDSYLK--EHQVETFLIKS 84
           +       D  L+     V+ + + +
Sbjct: 193 QIDVTALGDVALRGVSDPVKMYQLNT 218


>d3dy8a1 a.211.1.2 (A:182-505) High-affinity cGMP-specific
          3',5'-cyclic phosphodiesterase 9A, PDE9A {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 324

 Score = 28.8 bits (64), Expect = 0.22
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 7/55 (12%)

Query: 17 LRKWQFDVWSYD----VTLANHL-EAGGIPGRVHISRATLDCLQEMYEVEPGYGD 66
          LRK  FDVW ++    ++   H+    G+     I+  TL     ++ V   Y +
Sbjct: 15 LRKPTFDVWLWEPNEMLSCLEHMYHDLGLVRDFSINPVTLRRW--LFCVHDNYRN 67


>d1taza_ a.211.1.2 (A:) Catalytic domain of cyclic nucleotide
          phosphodiesterase 1b, PDE1B {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 357

 Score = 26.6 bits (58), Expect = 1.2
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 11/64 (17%)

Query: 17 LRKWQFDVWSYDVTLANH---------LEAGGIPGRVHISRATLDCLQEMYEVEPGYGDT 67
          L  W FDV+S +    +H         L    +  R  I    L     +  +E GYG  
Sbjct: 16 LDLWCFDVFSLNQAADDHALRTIVFELLTRHNLISRFKIPTVFLMSF--LDALETGYGKY 73

Query: 68 RDSY 71
          ++ Y
Sbjct: 74 KNPY 77


>d1y2ka1 a.211.1.2 (A:86-411) Catalytic domain of cyclic
          nucleotide phosphodiesterase pde4d {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 326

 Score = 25.8 bits (56), Expect = 2.7
 Identities = 9/57 (15%), Positives = 15/57 (26%), Gaps = 11/57 (19%)

Query: 17 LRKWQFDVWSYDVTLANH---------LEAGGIPGRVHISRATLDCLQEMYEVEPGY 64
          + KW   V+       N           +   +     I   TL     +  +E  Y
Sbjct: 14 VNKWGLHVFRIAELSGNRPLTVIMHTIFQERDLLKTFKIPVDTLITY--LMTLEDHY 68


>d1tbfa_ a.211.1.2 (A:) cGMP-specific 3',5'-cyclic
          phosphodiesterase pde5a1-Ibmx {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 326

 Score = 24.6 bits (53), Expect = 6.6
 Identities = 5/55 (9%), Positives = 13/55 (23%), Gaps = 7/55 (12%)

Query: 15 LGLRKWQFDVWSYD----VTLANHL-EAGGIPGRVHISRATLDCLQEMYEVEPGY 64
          L +  + F  +             +     +     +    L     +  V+  Y
Sbjct: 21 LKITDFSFSDFELSDLETALCTIRMFTDLNLVQNFQMKHEVLCRW--ILSVKKNY 73


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0552    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 554,886
Number of extensions: 22864
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 38
Number of HSP's successfully gapped: 9
Length of query: 151
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 73
Effective length of database: 1,336,656
Effective search space: 97575888
Effective search space used: 97575888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.1 bits)