RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy17573
(102 letters)
>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related
kinase-like Protein Serine/Threonine Kinases.
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related
(NDR) kinase subfamily, catalytic (c) domain. STKs
catalyze the transfer of the gamma-phosphoryl group from
ATP to serine/threonine residues on protein substrates.
The NDR subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. NDR kinase contains an N-terminal regulatory
(NTR) domain and an insert within the catalytic domain
that contains an auto-inhibitory sequence. Like many
other AGC kinases, NDR kinase requires phosphorylation
at two sites, the activation loop (A-loop) and the
hydrophobic motif (HM), for activity. NDR kinases
regulate mitosis, cell growth, embryonic development,
and neurological processes. They are also required for
proper centrosome duplication. Higher eukaryotes contain
two NDR isoforms, NDR1 and NDR2. This subfamily also
contains fungal NDR-like kinases.
Length = 364
Score = 57.0 bits (138), Expect = 6e-11
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTG 97
+F G +WE +R R PI+P+++S TD+SNFD++ P
Sbjct: 298 FFKGVDWEHIRERP--APIIPELKSITDTSNFDDFEEIDLDVPTSPGPP 344
Score = 52.4 bits (126), Expect = 2e-09
Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 36
+F G +WE +R R PI+P+++S TD+SNFD++
Sbjct: 298 FFKGVDWEHIRERP--APIIPELKSITDTSNFDDFE 331
>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine
Kinase, cAMP-dependent protein kinase. Serine/Threonine
Kinases (STKs), cAMP-dependent protein kinase (PKA)
subfamily, catalytic (c) subunit. STKs catalyze the
transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The PKA
subfamily is part of a larger superfamily that includes
the catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase (PI3K). This subfamily is composed of the
cAMP-dependent proteins kinases, PKA and PRKX. The
inactive PKA holoenzyme is a heterotetramer composed of
two phosphorylated and active catalytic (C) subunits
with a dimer of regulatory (R) subunits. Activation is
achieved through the binding of the important second
messenger cAMP to the R subunits, which leads to the
dissociation of PKA into the R dimer and two active C
subunits. PKA is present ubiquitously in cells and
interacts with many different downstream targets. It
plays a role in the regulation of diverse processes such
as growth, development, memory, metabolism, gene
expression, immunity, and lipolysis.
Length = 290
Score = 52.5 bits (127), Expect = 2e-09
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 47 CRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY 83
WF G +W L R + P +PK++ D+SNFD+Y
Sbjct: 254 HPWFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDDY 290
Score = 51.0 bits (123), Expect = 5e-09
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY 35
WF G +W L R + P +PK++ D+SNFD+Y
Sbjct: 256 WFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDDY 290
>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein
Serine/Threonine Kinases. Serine/Threonine Kinases
(STKs), cAMP-dependent protein kinase (PKA) subfamily,
PRKX-like kinases, catalytic (c) subunit. STKs catalyze
the transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The PKA
subfamily is part of a larger superfamily that includes
the catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. Members of this group include human PRKX (X
chromosome-encoded protein kinase), Drosophila DC2, and
similar proteins. PRKX is present in many tissues
including fetal and adult brain, kidney, and lung. The
PRKX gene is located in the Xp22.3 subregion and has a
homolog called PRKY on the Y chromosome. An abnormal
interchange between PRKX aand PRKY leads to the sex
reversal disorder of XX males and XY females. PRKX is
implicated in granulocyte/macrophage lineage
differentiation, renal cell epithelial migration, and
tubular morphogenesis in the developing kidney.
Length = 291
Score = 50.9 bits (122), Expect = 7e-09
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 48 RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 84
RWF +W+ + R L PPI+PK+ D+SNFD+YP
Sbjct: 255 RWFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFDDYP 291
Score = 49.0 bits (117), Expect = 4e-08
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 36
WF +W+ + R L PPI+PK+ D+SNFD+YP
Sbjct: 256 WFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFDDYP 291
>gnl|CDD|214529 smart00133, S_TK_X, Extension to Ser/Thr-type protein kinases.
Length = 64
Score = 46.2 bits (110), Expect = 2e-08
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 3 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
G +W+ L N+ + PP +PKI+S TD+SNFD ++ L+
Sbjct: 1 RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDPEFTEETPVLTPV 44
Score = 45.0 bits (107), Expect = 8e-08
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 51 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
G +W+ L N+ + PP +PKI+S TD+SNFD ++ P
Sbjct: 1 RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDPEFTEETP 39
>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR
kinase-like Protein Serine/Threonine Kinases.
Serine/Threonine Kinases (STKs), Rho-associated
coiled-coil containing protein kinase (ROCK) and Nuclear
Dbf2-Related (NDR)-like kinase subfamily, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The ROCK- and NDR-like
subfamily is part of a larger superfamily that includes
the catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. Members of this subfamily include ROCK and
ROCK-like proteins such as DMPK, MRCK, and CRIK, as well
as NDR and NDR-like proteins such as LATS, CBK1 and
Sid2p. ROCK and CRIK are effectors of the small GTPase
Rho, while MRCK is an effector of the small GTPase
Cdc42. NDR and NDR-like kinases contain an N-terminal
regulatory (NTR) domain and an insert within the
catalytic domain that contains an auto-inhibitory
sequence. Proteins in this subfamily are involved in
regulating many cellular functions including
contraction, motility, division, proliferation,
apoptosis, morphogenesis, and cytokinesis.
Length = 350
Score = 46.5 bits (111), Expect = 2e-07
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 48 RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
+F G +WE LR PP +P++ S D+SNFD++ D+D
Sbjct: 286 PFFKGIDWENLRETK--PPFVPELSSPLDTSNFDDFEDDKDL 325
Score = 45.7 bits (109), Expect = 5e-07
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
+F G +WE LR PP +P++ S D+SNFD++ D
Sbjct: 287 FFKGIDWENLRETK--PPFVPELSSPLDTSNFDDFEDD 322
>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein
Serine/Threonine Kinase, Mitogen and stress-activated
kinase 2. Serine/Threonine Kinases (STKs), Mitogen and
stress-activated kinase (MSK) subfamily, MSK2,
N-terminal catalytic (c) domain. STKs catalyze the
transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The MSK
subfamily is part of a larger superfamily that includes
the catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. MSKs contain an N-terminal kinase domain (NTD)
from the AGC family and a C-terminal kinase domain (CTD)
from the CAMK family, similar to 90 kDa ribosomal
protein S6 kinases (RSKs). MSKs are activated by two
major signaling cascades, the Ras-MAPK and p38 stress
kinase pathways, which trigger phosphorylation in the
activation loop (A-loop) of the CTD of MSK. The active
CTD phosphorylates the hydrophobic motif (HM) of NTD,
which facilitates the phosphorylation of the A-loop and
activates the NTD, which in turn phosphorylates
downstream targets. MSK2 and MSK1 play nonredundant
roles in activating histone H3 kinases, which play
pivotal roles in compaction of the chromatin fiber. MSK2
is the required H3 kinase in response to stress stimuli
and activation of the p38 MAPK pathway. MSK2 also plays
a role in the pathogenesis of psoriasis.
Length = 332
Score = 45.3 bits (107), Expect = 7e-07
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE--------YPPDQDPPPADDL 95
+F G +WE L R + PP P IR++ D NF E Y P PP +
Sbjct: 269 FFKGLDWEALALRKVNPPFRPSIRNELDVGNFAEEFTNLEPVYSPAGTPPSGARV 323
Score = 39.2 bits (91), Expect = 9e-05
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
+F G +WE L R + PP P IR++ D NF E
Sbjct: 269 FFKGLDWEALALRKVNPPFRPSIRNELDVGNFAE 302
>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein
Serine/Threonine Kinase, Protein Kinase B gamma.
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB)
or Akt subfamily, gamma (or Akt3) isoform, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The PKB subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. There are three
PKB isoforms from different genes, PKB-alpha (or Akt1),
PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB
contains an N-terminal pleckstrin homology (PH) domain
and a C-terminal catalytic domain. PKB-gamma is
predominantly expressed in neuronal tissues. Mice
deficient in PKB-gamma show a reduction in brain weight
due to the decreases in cell size and cell number.
PKB-gamma has also been shown to be upregulated in
estrogen-deficient breast cancer cells,
androgen-independent prostate cancer cells, and primary
ovarian tumors. It acts as a key mediator in the genesis
of ovarian cancer.
Length = 328
Score = 43.5 bits (102), Expect = 3e-06
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFD 51
+F G NW+ + ++ L+PP P++ S+TD+ FDE Q I ++ P ++ +
Sbjct: 253 FFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEFTAQTITITPPEKYDE 303
Score = 41.2 bits (96), Expect = 2e-05
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQ----DPPPADDLTGWDA 100
+F G NW+ + ++ L+PP P++ S+TD+ FDE Q PP D G D
Sbjct: 253 FFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEFTAQTITITPPEKYDEDGMDC 308
>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy
protein kinase-like Protein Serine/Threonine Kinases.
Serine/Threonine Kinases (STKs), Myotonic Dystrophy
protein kinase (DMPK)-like subfamily, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The DMPK-like subfamily
is part of a larger superfamily that includes the
catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. The DMPK-like subfamily is composed of DMPK
and DMPK-related cell division control protein 42
(Cdc42) binding kinase (MRCK). Three isoforms of MRCK
are known, named alpha, beta and gamma. The DMPK gene is
implicated in myotonic dystrophy 1 (DM1), an inherited
multisystemic disorder with symptoms that include muscle
hyperexcitability, progressive muscle weakness and
wasting, cataract development, testicular atrophy, and
cardiac conduction defects. The genetic basis for DM1 is
the mutational expansion of a CTG repeat in the 3'-UTR
of DMPK. DMPK is expressed in skeletal and cardiac
muscles, and in central nervous tissues. The functional
role of DMPK is not fully understood. It may play a role
in the signal transduction and homeostasis of calcium.
MRCK is activated via interaction with the small GTPase
Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent
cell motility. MRCKgamma is expressed in heart and
skeletal muscles, unlike MRCKalpha and MRCKbeta, which
are expressed ubiquitously.
Length = 331
Score = 42.8 bits (101), Expect = 5e-06
Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
+F+G +W+ +RN T P +P++ S TD+SNFD
Sbjct: 268 FFEGIDWDNIRNST--APYVPEVSSPTDTSNFD 298
Score = 42.8 bits (101), Expect = 5e-06
Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F+G +W+ +RN T P +P++ S TD+SNFD
Sbjct: 268 FFEGIDWDNIRNST--APYVPEVSSPTDTSNFD 298
>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine
Kinase, Protein Kinase N. Serine/Threonine Kinases
(STKs), Protein Kinase N (PKN) subfamily, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The PKN subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. PKN has a
C-terminal catalytic domain that is highly homologous to
PKCs. Its unique N-terminal regulatory region contains
antiparallel coiled-coil (ACC) domains. In mammals,
there are three PKN isoforms from different genes
(designated PKN-alpha, beta, and gamma), which show
different enzymatic properties, tissue distribution, and
varied functions. PKN can be activated by the small
GTPase Rho, and by fatty acids such as arachidonic and
linoleic acids. It is involved in many biological
processes including cytokeletal regulation, cell
adhesion, vesicle transport, glucose transport,
regulation of meiotic maturation and embryonic cell
cycles, signaling to the nucleus, and tumorigenesis.
Length = 324
Score = 42.4 bits (100), Expect = 8e-06
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 48 RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
+F NW+ L R + PP +P I+ D SNFDE
Sbjct: 258 PFFRDINWDDLLARKIKPPFVPTIKGPEDVSNFDE 292
Score = 42.0 bits (99), Expect = 1e-05
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
+F NW+ L R + PP +P I+ D SNFDE
Sbjct: 259 FFRDINWDDLLARKIKPPFVPTIKGPEDVSNFDE 292
>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein
Serine/Threonine Kinases, Novel Protein Kinase C theta
and delta. Serine/Threonine Kinases (STKs), Novel
Protein Kinase C (nPKC), theta and delta-like isoforms,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The nPKC subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. PKCs are
classified into three groups (classical, atypical, and
novel) depending on their mode of activation and the
structural characteristics of their regulatory domain.
nPKCs are calcium-independent, but require DAG
(1,2-diacylglycerol) and phosphatidylserine (PS) for
activity. There are four nPKC isoforms, delta, epsilon,
eta, and theta. PKC-theta is selectively expressed in
T-cells and plays an important and non-redundant role in
several aspects of T-cell biology. PKC-delta plays a
role in cell cycle regulation and programmed cell death
in many cell types.
Length = 316
Score = 42.1 bits (99), Expect = 8e-06
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQAIFLSFPCRWFD 51
+F G +WE L R + PP PK++S +D+SNFD P D+ + S F
Sbjct: 250 FFRGIDWERLEKREIPPPFKPKVKSPSDASNFDREFTNEKVRLSPVDKKLLASMDQEQFR 309
Query: 52 GFNW 55
GF++
Sbjct: 310 GFSF 313
Score = 40.5 bits (95), Expect = 4e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F G +WE L R + PP PK++S +D+SNFD
Sbjct: 250 FFRGIDWERLEKREIPPPFKPKVKSPSDASNFD 282
>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine
Kinase, Protein Kinase B. Serine/Threonine Kinases
(STKs), Protein Kinase B (PKB) or Akt subfamily,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The PKB subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase (PI3K). There are
three PKB isoforms from different genes, PKB-alpha (or
Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB
contains an N-terminal pleckstrin homology (PH) domain
and a C-terminal catalytic domain. It is activated
downstream of PI3K and plays important roles in diverse
cellular functions including cell survival, growth,
proliferation, angiogenesis, motility, and migration.
PKB also has a central role in a variety of human
cancers, having been implicated in tumor initiation,
progression, and metastasis.
Length = 323
Score = 41.3 bits (97), Expect = 2e-05
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 13/63 (20%)
Query: 48 RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQDPPPADDLTGW 98
R+F NW+ + + L PP P++ S+TD+ FDE PPD+ D L
Sbjct: 252 RFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEFTAQSITITPPDRY----DSLGLL 307
Query: 99 DAD 101
+
Sbjct: 308 QLE 310
Score = 40.2 bits (94), Expect = 5e-05
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCR 48
+F NW+ + + L PP P++ S+TD+ FDE Q+I ++ P R
Sbjct: 253 FFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEFTAQSITITPPDR 300
>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein
Serine/Threonine Kinase, Protein Kinase B beta.
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB)
or Akt subfamily, beta (or Akt2) isoform, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The PKB subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. There are three
PKB isoforms from different genes, PKB-alpha (or Akt1),
PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB
contains an N-terminal pleckstrin homology (PH) domain
and a C-terminal catalytic domain. PKB-beta is the
predominant PKB isoform expressed in insulin-responsive
tissues. It plays a critical role in the regulation of
glucose homeostasis. It is also implicated in muscle
cell differentiation. Mice deficient in PKB-beta display
normal growth weights but exhibit severe insulin
resistance and diabetes, accompanied by lipoatrophy and
B-cell failure.
Length = 323
Score = 41.1 bits (96), Expect = 2e-05
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRN 60
+F NW+ + + L+PP P++ S+ D+ FD+ Q+I ++ P R +D L
Sbjct: 253 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDR-YDSLGLLELDQ 311
Query: 61 RTLIP 65
RT P
Sbjct: 312 RTHFP 316
Score = 39.2 bits (91), Expect = 8e-05
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 9/49 (18%)
Query: 48 RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQ 87
R+F NW+ + + L+PP P++ S+ D+ FD+ PPD+
Sbjct: 252 RFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDR 300
>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein
Serine/Threonine Kinase, Protein Kinase B alpha.
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB)
or Akt subfamily, alpha (or Akt1) isoform, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The PKB subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. There are three
PKB isoforms from different genes, PKB-alpha (or Akt1),
PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB
contains an N-terminal pleckstrin homology (PH) domain
and a C-terminal catalytic domain. PKB-alpha is
predominantly expressed in endothelial cells. It is
critical for the regulation of angiogenesis and the
maintenance of vascular integrity. It also plays a role
in adipocyte differentiation. Mice deficient in
PKB-alpha exhibit perinatal morbidity, growth
retardation, reduction in body weight accompanied by
reduced sizes of multiple organs, and enhanced apoptosis
in some cell types. PKB-alpha activity has been reported
to be frequently elevated in breast and prostate
cancers. In some cancer cells, PKB-alpha may act as a
suppressor of metastasis.
Length = 325
Score = 40.8 bits (95), Expect = 3e-05
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 9/50 (18%)
Query: 48 RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQD 88
++F G W+ + + L+PP P++ S+TD+ FDE PPDQD
Sbjct: 253 KFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFTAQMITITPPDQD 302
Score = 37.7 bits (87), Expect = 3e-04
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
+F G W+ + + L+PP P++ S+TD+ FDE Q I ++ P
Sbjct: 254 FFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFTAQMITITPP 299
>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein
Serine/Threonine Kinase, Classical Protein Kinase C.
Serine/Threonine Kinases (STKs), Classical (or
Conventional) Protein Kinase C (cPKC) subfamily,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The cPKC subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase (PI3K). PKCs are
classified into three groups (classical, atypical, and
novel) depending on their mode of activation and the
structural characteristics of their regulatory domain.
PKCs undergo three phosphorylations in order to take
mature forms. In addition, cPKCs depend on calcium, DAG
(1,2-diacylglycerol), and in most cases,
phosphatidylserine (PS) for activation. cPKCs contain a
calcium-binding C2 region in their regulatory domain.
There are four cPKC isoforms, named alpha, betaI,
betaII, and gamma. cPKCs are potent kinases for
histones, myelin basic protein, and protamine. PKC-gamma
is mainly expressed in neuronal tissues. It plays a role
in protection from ischemia.
Length = 324
Score = 40.5 bits (95), Expect = 3e-05
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
+F +WE L R + PP PK++ + + NFD++ PPD+ + + F
Sbjct: 259 FFRRIDWEKLERREIQPPFKPKVKGRRSAENFDKFFTREPPVLTPPDKLVIANIDQSEFQ 318
Query: 52 GFNW 55
GF++
Sbjct: 319 GFSF 322
Score = 38.6 bits (90), Expect = 2e-04
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Query: 48 RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY----PPDQDPP 90
R D WE L R + PP PK++ + + NFD++ PP PP
Sbjct: 261 RRID---WEKLERREIQPPFKPKVKGRRSAENFDKFFTREPPVLTPP 304
>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein
Serine/Threonine Kinase, Novel Protein Kinase C eta.
Serine/Threonine Kinases (STKs), Novel Protein Kinase C
(nPKC), eta isoform, catalytic (c) domain. STKs catalyze
the transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The
nPKC subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. PKCs are classified into three groups
(classical, atypical, and novel) depending on their mode
of activation and the structural characteristics of
their regulatory domain. nPKCs are calcium-independent,
but require DAG (1,2-diacylglycerol) and
phosphatidylserine (PS) for activity. There are four
nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta
is predominantly expressed in squamous epithelia, where
it plays a crucial role in the signaling of cell-type
specific differentiation. It is also expressed in pro-B
cells and early-stage thymocytes, and acts as a key
regulator in early B-cell development. PKC-eta increases
glioblastoma multiforme (GBM) proliferation and
resistance to radiation, and is being developed as a
therapeutic target for the management of GBM.
Length = 320
Score = 40.3 bits (94), Expect = 4e-05
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD-EYPPDQAIFLSFPCRWFDGFNWEGLR 59
+F +WE L R + PP P+I+S+ D SNFD ++ + + N + R
Sbjct: 255 FFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDPDFIKEDPVLTPIEESLLPMINQDEFR 314
Query: 60 N 60
N
Sbjct: 315 N 315
Score = 39.9 bits (93), Expect = 5e-05
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
+F +WE L R + PP P+I+S+ D SNFD +DP
Sbjct: 255 FFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDPDFIKEDP 295
>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein
Serine/Threonine Kinase, Novel Protein Kinase C epsilon.
Serine/Threonine Kinases (STKs), Novel Protein Kinase C
(nPKC), epsilon isoform, catalytic (c) domain. STKs
catalyze the transfer of the gamma-phosphoryl group from
ATP to serine/threonine residues on protein substrates.
The nPKC subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. PKCs are classified into three groups
(classical, atypical, and novel) depending on their mode
of activation and the structural characteristics of
their regulatory domain. nPKCs are calcium-independent,
but require DAG (1,2-diacylglycerol) and
phosphatidylserine (PS) for activity. There are four
nPKC isoforms, delta, epsilon, eta, and theta.
PKC-epsilon has been shown to behave as an oncoprotein.
Its overexpression contributes to neoplastic
transformation depending on the cell type. It
contributes to oncogenesis by inducing disordered cell
growth and inhibiting cell death. It also plays a role
in tumor invasion and metastasis. PKC-epsilon has also
been found to confer cardioprotection against ischemia
and reperfusion-mediated damage. Other cellular
functions include the regulation of gene expression,
cell adhesion, and cell motility.
Length = 321
Score = 40.2 bits (94), Expect = 4e-05
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
+F +W L R + PP PKI+++ D +NFD+ ++P
Sbjct: 256 FFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQDFTKEEP 296
Score = 39.8 bits (93), Expect = 5e-05
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQAIFLSFPCRWFD 51
+F +W L R + PP PKI+++ D +NFD+ P D A+ F
Sbjct: 256 FFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQDFTKEEPVLTPVDPAVIKQINQEEFR 315
Query: 52 GFNW 55
GF++
Sbjct: 316 GFSF 319
>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein
Serine/Threonine Kinase, Citron Rho-interacting kinase.
Serine/Threonine Kinases (STKs), Citron Rho-interacting
kinase (CRIK) subfamily, catalytic (c) domain. STKs
catalyze the transfer of the gamma-phosphoryl group from
ATP to serine/threonine residues on protein substrates.
The CRIK subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. CRIK is also called citron kinase. It contains
a catalytic domain, a central coiled-coil domain, and a
C-terminal region containing a Rho-binding domain (RBD),
a zinc finger, and a pleckstrin homology (PH) domain, in
addition to other motifs. CRIK, an effector of the small
GTPase Rho, plays an important function during
cytokinesis and affects its contractile process.
CRIK-deficient mice show severe ataxia and epilepsy as a
result of abnormal cytokinesis and massive apoptosis in
neuronal precursors. A Down syndrome critical region
protein TTC3 interacts with CRIK and inhibits
CRIK-dependent neuronal differentiation and neurite
extension.
Length = 330
Score = 39.8 bits (93), Expect = 5e-05
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPP 90
+F +W +RN +PP +P ++S D+SNFDE +
Sbjct: 265 FFSKIDWNNIRNS--LPPFVPTLKSDDDTSNFDEPEKNSTRR 304
Score = 38.6 bits (90), Expect = 1e-04
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
+F +W +RN +PP +P ++S D+SNFDE +
Sbjct: 265 FFSKIDWNNIRNS--LPPFVPTLKSDDDTSNFDEPEKN 300
>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine
Kinase, Protein Kinase C. Serine/Threonine Kinases
(STKs), Protein Kinase C (PKC) subfamily, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The PKC subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. PKCs are
classified into three groups (classical, atypical, and
novel) depending on their mode of activation and the
structural characteristics of their regulatory domain.
PKCs undergo three phosphorylations in order to take
mature forms. In addition, classical PKCs depend on
calcium, DAG (1,2-diacylglycerol), and in most cases,
phosphatidylserine (PS) for activation. Novel PKCs are
calcium-independent, but require DAG and PS for
activity, while atypical PKCs only require PS. PKCs
phosphorylate and modify the activities of a wide
variety of cellular proteins including receptors,
enzymes, cytoskeletal proteins, transcription factors,
and other kinases. They play a central role in signal
transduction pathways that regulate cell migration and
polarity, proliferation, differentiation, and apoptosis.
Also included in this subfamily are the PKC-like
proteins, called PKNs.
Length = 318
Score = 39.7 bits (93), Expect = 6e-05
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 2 FDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFDG 52
F +W+ L + + PP PKI+ + D SNFD+ PPD+AI + F G
Sbjct: 255 FREIDWDKLERKEIKPPFKPKIKGRFDVSNFDDEFTKEKPVLTPPDEAIIRNIDQEEFRG 314
Query: 53 FNW 55
F++
Sbjct: 315 FSY 317
Score = 37.4 bits (87), Expect = 4e-04
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 50 FDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY----PPDQDPP 90
F +W+ L + + PP PKI+ + D SNFD+ P PP
Sbjct: 255 FREIDWDKLERKEIKPPFKPKIKGRFDVSNFDDEFTKEKPVLTPP 299
>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit;
Provisional.
Length = 329
Score = 39.8 bits (93), Expect = 6e-05
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 48 RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP--PDQDPPP 91
+F G NW+ L R PI +++S D+SNF++YP P PP
Sbjct: 272 PYFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEKYPDSPVDRLPP 317
Score = 37.9 bits (88), Expect = 2e-04
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 36
+F G NW+ L R PI +++S D+SNF++YP
Sbjct: 273 YFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEKYP 308
>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein
Serine/Threonine Kinase, Novel Protein Kinase C theta.
Serine/Threonine Kinases (STKs), Novel Protein Kinase C
(nPKC), theta isoform, catalytic (c) domain. STKs
catalyze the transfer of the gamma-phosphoryl group from
ATP to serine/threonine residues on protein substrates.
The nPKC subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. PKCs are classified into three groups
(classical, atypical, and novel) depending on their mode
of activation and the structural characteristics of
their regulatory domain. nPKCs are calcium-independent,
but require DAG (1,2-diacylglycerol) and
phosphatidylserine (PS) for activity. There are four
nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta
is selectively expressed in T-cells and plays an
important and non-redundant role in several aspects of
T-cell biology. Although T-cells also express other PKC
isoforms, PKC-theta is unique in that upon antigen
stimulation, it is translocated to the plasma membrane
at the immunological synapse, where it mediates signals
essential for T-cell activation. It is essential for
TCR-induced proliferation, cytokine production, T-cell
survival, and the differentiation and effector function
of T-helper (Th) cells, particularly Th2 and Th17.
PKC-theta is being developed as a therapeutic target for
Th2-mediated allergic inflammation and Th17-mediated
autoimmune diseases.
Length = 316
Score = 37.6 bits (87), Expect = 4e-04
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
+F +W L R + PP PK++S D SNFD+ ++ P
Sbjct: 250 FFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEFLNEKP 290
Score = 37.3 bits (86), Expect = 4e-04
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCR 48
+F +W L R + PP PK++S D SNFD+ ++ LS R
Sbjct: 250 FFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEFLNEKPRLSVTDR 297
>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase
1-like Protein Serine/Threonine Kinases.
Serine/Threonine Kinases (STKs), Yeast protein kinase 1
(YPK1)-like subfamily, catalytic (c) domain. STKs
catalyze the transfer of the gamma-phosphoryl group from
ATP to serine/threonine residues on protein substrates.
The YPK1-like subfamily is part of a larger superfamily
that includes the catalytic domains of other protein
STKs, protein tyrosine kinases, RIO kinases,
aminoglycoside phosphotransferase, choline kinase, and
phosphoinositide 3-kinase. This subfamily is composed of
fungal proteins with similarity to the AGC STKs,
Saccharomyces cerevisiae YPK1 and Schizosaccharomyces
pombe Gad8p. YPK1 is required for cell growth and acts
as a downstream kinase in the sphingolipid-mediated
signaling pathway of yeast. It also plays a role in
efficient endocytosis and in the maintenance of cell
wall integrity. Gad8p is a downstream target of Tor1p,
the fission yeast homolog of mTOR. It plays a role in
cell growth and sexual development.
Length = 312
Score = 37.2 bits (86), Expect = 4e-04
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
+F +W+ L + + PP P + S D+SNFDE
Sbjct: 249 FFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDE 282
Score = 37.2 bits (86), Expect = 4e-04
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
+F +W+ L + + PP P + S D+SNFDE
Sbjct: 249 FFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDE 282
>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein
Serine/Threonine Kinase, Rho-associated coiled-coil
containing protein kinase. Serine/Threonine Kinases
(STKs), Rho-associated coiled-coil containing protein
kinase (ROCK) subfamily, catalytic (c) domain. STKs
catalyze the transfer of the gamma-phosphoryl group from
ATP to serine/threonine residues on protein substrates.
The ROCK subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. ROCK is also referred to as Rho-associated
kinase or simply as Rho kinase. It contains an
N-terminal extension, a catalytic kinase domain, and a
long C-terminal extension, which contains a coiled-coil
region encompassing a Rho-binding domain (RBD) and a
pleckstrin homology (PH) domain. ROCK is auto-inhibited
by the RBD and PH domain interacting with the catalytic
domain. It is activated via interaction with Rho GTPases
and is involved in many cellular functions including
contraction, adhesion, migration, motility,
proliferation, and apoptosis. The ROCK subfamily
consists of two isoforms, ROCK1 and ROCK2, which may be
functionally redundant in some systems, but exhibit
different tissue distributions. Both isoforms are
ubiquitously expressed in most tissues, but ROCK2 is
more prominent in brain and skeletal muscle while ROCK1
is more pronounced in the liver, testes, and kidney.
Studies in knockout mice result in different phenotypes,
suggesting that the two isoforms do not compensate for
each other during embryonic development.
Length = 370
Score = 37.4 bits (87), Expect = 4e-04
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 51 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
D + ++ +R + P++P++ S D+SNFD+ D
Sbjct: 310 DQWTFDNIRET--VAPVVPELSSDIDTSNFDDIEDDDKN 346
Score = 36.3 bits (84), Expect = 0.001
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 3 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPC-RWFDG 52
D + ++ +R + P++P++ S D+SNFD+ D +FP + F G
Sbjct: 310 DQWTFDNIRET--VAPVVPELSSDIDTSNFDDIEDDDKNEETFPLPKAFAG 358
>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein
Serine/Threonine Kinase, Novel Protein Kinase C delta.
Serine/Threonine Kinases (STKs), Novel Protein Kinase C
(nPKC), delta isoform, catalytic (c) domain. STKs
catalyze the transfer of the gamma-phosphoryl group from
ATP to serine/threonine residues on protein substrates.
The nPKC subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. PKCs are classified into three groups
(classical, atypical, and novel) depending on their mode
of activation and the structural characteristics of
their regulatory domain. nPKCs are calcium-independent,
but require DAG (1,2-diacylglycerol) and
phosphatidylserine (PS) for activity. There are four
nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta
plays a role in cell cycle regulation and programmed
cell death in many cell types. It slows down cell
proliferation, inducing cell cycle arrest and enhancing
cell differentiation. PKC-delta is also involved in the
regulation of transcription as well as immune and
inflammatory responses. It plays a central role in the
genotoxic stress response that leads to DNA
damaged-induced apoptosis.
Length = 316
Score = 37.2 bits (86), Expect = 5e-04
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
+F NW L R L PP PK++S +D SNFD
Sbjct: 250 FFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR 283
Score = 37.2 bits (86), Expect = 5e-04
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
+F NW L R L PP PK++S +D SNFD
Sbjct: 250 FFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR 283
>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein
Serine/Threonine Kinase, DMPK-related cell division
control protein 42 binding kinase beta.
Serine/Threonine Kinases (STKs), DMPK-like subfamily,
DMPK-related cell division control protein 42 (Cdc42)
binding kinase (MRCK) beta isoform, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The DMPK-like subfamily
is part of a larger superfamily that includes the
catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. MRCK is activated via interaction with the
small GTPase Cdc42. MRCK/Cdc42 signaling mediates
myosin-dependent cell motility. MRCKbeta is expressed
ubiquitously in many tissues.
Length = 331
Score = 36.5 bits (84), Expect = 0.001
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
+F+G +WE +RN L P +P + S +D+SNFD
Sbjct: 268 FFEGIDWENIRN--LEAPYIPDVSSPSDTSNFD 298
Score = 36.5 bits (84), Expect = 0.001
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F+G +WE +RN L P +P + S +D+SNFD
Sbjct: 268 FFEGIDWENIRN--LEAPYIPDVSSPSDTSNFD 298
>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein
Serine/Threonine Kinase, 70 kDa ribosomal protein S6
kinase. Serine/Threonine Kinases (STKs), 70 kDa
ribosomal protein S6 kinase (p70S6K) subfamily,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The p70S6K subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. p70S6K (or S6K)
contains only one catalytic kinase domain, unlike p90
ribosomal S6 kinases (RSKs). It acts as a downstream
effector of the STK mTOR (mammalian Target of Rapamycin)
and plays a role in the regulation of the translation
machinery during protein synthesis. p70S6K also plays a
pivotal role in regulating cell size and glucose
homeostasis. Its targets include S6, the translation
initiation factor eIF3, and the insulin receptor
substrate IRS-1, among others. Mammals contain two
isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta).
Length = 323
Score = 36.3 bits (84), Expect = 0.001
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 10 LRNRTLIPPILP--------KIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNR 61
L+ + +PP L K+ + SS P D A S P +F NW+ L R
Sbjct: 213 LKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP--FFRHVNWDDLLAR 270
Query: 62 TLIPPILPKIRSQTDSSNFDEYPPDQDP 89
+ PP P ++S+ D S FD Q P
Sbjct: 271 KVEPPFKPLLQSEEDVSQFDSKFTRQTP 298
Score = 35.2 bits (81), Expect = 0.003
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD-----EYP---PDQAIFLSFPCRWFDG 52
+F NW+ L R + PP P ++S+ D S FD + P PD + + F G
Sbjct: 258 FFRHVNWDDLLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQIFLG 317
Query: 53 FNW 55
F +
Sbjct: 318 FTY 320
>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein
Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1.
Serine/Threonine Kinases (STKs), NDR kinase subfamily,
NDR1 isoform, catalytic (c) domain. STKs catalyze the
transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The NDR
subfamily is part of a larger superfamily that includes
the catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. NDR kinase contains an N-terminal regulatory
(NTR) domain and an insert within the catalytic domain
that contains an auto-inhibitory sequence. Like many
other AGC kinases, NDR kinase requires phosphorylation
at two sites, the activation loop (A-loop) and the
hydrophobic motif (HM), for activity. Higher eukaryotes
contain two NDR isoforms, NDR1 and NDR2. Both isoforms
play a role in proper centrosome duplication. NDR1 is
highly expressed in thymus, muscle, lung and spleen. It
is not an essential protein because mice deficient of
NDR1 remain viable and fertile. However, these mice
develop T-cell lymphomas and appear to be hypersenstive
to carcinogenic treatment. NDR1 appears to act as a
tumor suppressor. NDR1 is also called STK38.
Length = 363
Score = 35.0 bits (80), Expect = 0.002
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 36
+F+G +WE +R R PI +I+S D+SNFDE+P
Sbjct: 295 FFEGVDWEHIRERPAAIPI--EIKSIDDTSNFDEFP 328
Score = 35.0 bits (80), Expect = 0.002
Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 84
+F+G +WE +R R PI +I+S D+SNFDE+P
Sbjct: 295 FFEGVDWEHIRERPAAIPI--EIKSIDDTSNFDEFP 328
>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and
Dbf2p-like Protein Serine/Threonine Kinases.
Serine/Threonine Kinases (STKs), ROCK- and NDR-like
subfamily, fungal Sid2p- and Dbf2p-like proteins,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The Sid2p- and
Dbf2p-like group is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. This group contains fungal kinases including
Schizosaccharomyces pombe Sid2p and Saccharomyces
cerevisiae Dbf2p. Group members show similarity to NDR
kinases in that they contain an N-terminal regulatory
(NTR) domain and an insert within the catalytic domain
that contains an auto-inhibitory sequence. Sid2p plays a
crucial role in the septum initiation network (SIN) and
in the initiation of cytokinesis. Dbf2p is important in
regulating the mitotic exit network (MEN) and in
cytokinesis.
Length = 333
Score = 35.1 bits (81), Expect = 0.003
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQD 88
+F +W LR L PP +P++ S+ D+ FD++ + D
Sbjct: 259 FFKEVDWNELR--ELKPPFVPELESEIDTGYFDDFENEDD 296
Score = 34.3 bits (79), Expect = 0.005
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY 35
+F +W LR L PP +P++ S+ D+ FD++
Sbjct: 259 FFKEVDWNELR--ELKPPFVPELESEIDTGYFDDF 291
>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein
Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2.
Serine/Threonine Kinases (STKs), NDR kinase subfamily,
NDR2 isoform, catalytic (c) domain. STKs catalyze the
transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The NDR
subfamily is part of a larger superfamily that includes
the catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. NDR kinase contains an N-terminal regulatory
(NTR) domain and an insert within the catalytic domain
that contains an auto-inhibitory sequence. Like many
other AGC kinases, NDR kinase requires phosphorylation
at two sites, the activation loop (A-loop) and the
hydrophobic motif (HM), for activity. Higher eukaryotes
contain two NDR isoforms, NDR1 and NDR2. Both isoforms
play a role in proper centrosome duplication. In
addition, NDR2 plays a role in regulating neuronal
growth and differentiation, as well as in facilitating
neurite outgrowth. It is also implicated in fear
conditioning as it contributes to the coupling of
neuronal morphological changes with fear-memory
consolidation. NDR2 is also referred to as STK38-like.
Length = 360
Score = 35.0 bits (80), Expect = 0.003
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWD 99
+F+G +W +R R PI +I+S D+SNFDE+P PA++ D
Sbjct: 295 FFEGVDWGHIRERPAAIPI--EIKSIDDTSNFDEFPESDILQPAENTIEPD 343
Score = 34.6 bits (79), Expect = 0.004
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 36
+F+G +W +R R PI +I+S D+SNFDE+P
Sbjct: 295 FFEGVDWGHIRERPAAIPI--EIKSIDDTSNFDEFP 328
>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein
Serine/Threonine Kinase, Classical Protein Kinase C
alpha. Serine/Threonine Kinases (STKs), Classical
Protein Kinase C (cPKC) subfamily, alpha isoform,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The cPKC subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. PKCs are
classified into three groups (classical, atypical, and
novel) depending on their mode of activation and the
structural characteristics of their regulatory domain.
PKCs undergo three phosphorylations in order to take
mature forms. In addition, cPKCs depend on calcium, DAG
(1,2-diacylglycerol), and in most cases,
phosphatidylserine (PS) for activation. There are four
cPKC isoforms, named alpha, betaI, betaII, and gamma.
PKC-alpha is expressed in many tissues and is associated
with cell proliferation, apoptosis, and cell motility.
It plays a role in the signaling of the growth factors
PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha
have been detected in many transformed cell lines and
several human tumors. In addition, PKC-alpha is required
for HER2 dependent breast cancer invasion.
Length = 323
Score = 35.0 bits (80), Expect = 0.003
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
+F +W+ L NR + PP PK+ + + NFD++ PPDQ + + F+
Sbjct: 259 FFRRIDWDKLENREIQPPFKPKVCGKG-AENFDKFFTRGQPVLTPPDQLVIANIDQADFE 317
Query: 52 GFNW 55
GF++
Sbjct: 318 GFSY 321
Score = 31.1 bits (70), Expect = 0.066
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 10/48 (20%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQ 87
+F +W+ L NR + PP PK+ + + NFD++ PPDQ
Sbjct: 259 FFRRIDWDKLENREIQPPFKPKVCGKG-AENFDKFFTRGQPVLTPPDQ 305
>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein
Serine/Threonine Kinase, Rho-associated coiled-coil
containing protein kinase 2. Serine/Threonine Kinases
(STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The ROCK subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. ROCK contains an
N-terminal extension, a catalytic kinase domain, and a
C-terminal extension, which contains a coiled-coil
region encompassing a Rho-binding domain (RBD) and a
pleckstrin homology (PH) domain. ROCK is auto-inhibited
by the RBD and PH domain interacting with the catalytic
domain, and is activated via interaction with Rho
GTPases. ROCK2 was the first identified target of
activated RhoA, and was found to play a role in stress
fiber and focal adhesion formation. It is prominently
expressed in the brain, heart, and skeletal muscles. It
is implicated in vascular and neurological disorders,
such as hypertension and vasospasm of the coronary and
cerebral arteries. ROCK2 is also activated by caspase-2
cleavage, resulting in thrombin-induced microparticle
generation in response to cell activation. Mice
deficient in ROCK2 show intrauterine growth retardation
and embryonic lethality because of placental
dysfunction.
Length = 370
Score = 35.0 bits (80), Expect = 0.003
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 3 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
D +NW+ +R P++P++ S DSSNFD+ D+ +FP
Sbjct: 310 DQWNWDNIRET--AAPVVPELSSDIDSSNFDDIEDDKGDVETFP 351
Score = 32.7 bits (74), Expect = 0.020
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 51 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQ 87
D +NW+ +R P++P++ S DSSNFD+ D+
Sbjct: 310 DQWNWDNIRET--AAPVVPELSSDIDSSNFDDIEDDK 344
>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein
Serine/Threonine Kinase, Large Tumor Suppressor.
Serine/Threonine Kinases (STKs), Large Tumor Suppressor
(LATS) subfamily, catalytic (c) domain. STKs catalyze
the transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The
LATS subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. LATS was originally identified in Drosophila
using a screen for genes whose inactivation led to
overproliferation of cells. In tetrapods, there are two
LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in
mice results in the development of various tumors,
including sarcomas and ovarian cancer. LATS functions as
a tumor suppressor and is implicated in cell cycle
regulation.
Length = 376
Score = 34.4 bits (79), Expect = 0.004
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDAD 101
+F G ++ L R P I PKI TD+SNFD P++ D +G +
Sbjct: 303 FFKGIDFASLIRRQKAPYI-PKITHPTDTSNFDPVDPEK---LRSDDSGESSP 351
Score = 34.0 bits (78), Expect = 0.006
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQ 39
+F G ++ L R P I PKI TD+SNFD P++
Sbjct: 303 FFKGIDFASLIRRQKAPYI-PKITHPTDTSNFDPVDPEK 340
>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein
Serine/Threonine Kinase, Classical Protein Kinase C
beta. Serine/Threonine Kinases (STKs), Classical
Protein Kinase C (cPKC) subfamily, beta isoforms,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The cPKC subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. PKCs are
classified into three groups (classical, atypical, and
novel) depending on their mode of activation and the
structural characteristics of their regulatory domain.
PKCs undergo three phosphorylations in order to take
mature forms. In addition, cPKCs depend on calcium, DAG
(1,2-diacylglycerol), and in most cases,
phosphatidylserine (PS) for activation. There are four
cPKC isoforms, named alpha, betaI, betaII, and gamma.
The PKC beta isoforms (I and II), generated by
alternative splicing of a single gene, are
preferentially activated by hyperglycemia-induced DAG in
retinal tissues. This is implicated in diabetic
microangiopathy such as ischemia, neovascularization,
and abnormal vasodilator function. PKC-beta also plays
an important role in VEGF signaling. In addition,
glucose regulates proliferation in retinal endothelial
cells via PKC-betaI. PKC-beta is also being explored as
a therapeutic target in cancer. It contributes to tumor
formation and is involved in the tumor host mechanisms
of inflammation and angiogenesis.
Length = 323
Score = 34.2 bits (78), Expect = 0.005
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
+F +WE L + + PP PK D+ NFD++ PPDQ + ++ F+
Sbjct: 259 FFRYIDWEKLERKEVQPPYKPK-ACGRDAENFDKFFTRHPPVLTPPDQEVIMNLDQSEFE 317
Query: 52 GFNW 55
GF++
Sbjct: 318 GFSY 321
Score = 30.7 bits (69), Expect = 0.10
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY----PPDQDPPPADDLTGWDAD 101
+F +WE L + + PP PK D+ NFD++ PP PP + + D
Sbjct: 259 FFRYIDWEKLERKEVQPPYKPK-ACGRDAENFDKFFTRHPPVLTPPDQEVIMNLDQS 314
>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine
Kinase, Serum- and Glucocorticoid-induced Kinase.
Serine/Threonine Kinases (STKs), Serum- and
Glucocorticoid-induced Kinase (SGK) subfamily, catalytic
(c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The SGK subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. There are three
isoforms of SGK, named SGK1, SGK2, and SGK3 (also called
cytokine-independent survival kinase CISK). SGKs are
activated by insulin and growth factors via
phosphoinositide 3-kinase and PDK1. They activate ion
channels, ion carriers, and the Na-K-ATPase, as well as
regulate the activity of enzymes and transcription
factors. SGKs play important roles in transport, hormone
release, neuroexcitability, cell proliferation, and
apoptosis.
Length = 323
Score = 34.4 bits (79), Expect = 0.005
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD-EYPPDQDPP 90
+F NW+ L N+ + PP P + D +FD E+ + P
Sbjct: 253 FFSSINWDDLVNKKITPPFNPNVSGPMDLKHFDPEFTEEPVPN 295
Score = 34.0 bits (78), Expect = 0.007
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
+F NW+ L N+ + PP P + D +FD
Sbjct: 253 FFSSINWDDLVNKKITPPFNPNVSGPMDLKHFD 285
>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein
Serine/Threonine Kinase, Rho-associated coiled-coil
containing protein kinase 1. Serine/Threonine Kinases
(STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The ROCK subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. ROCK contains an
N-terminal extension, a catalytic kinase domain, and a
C-terminal extension, which contains a coiled-coil
region encompassing a Rho-binding domain (RBD) and a
pleckstrin homology (PH) domain. ROCK is auto-inhibited
by the RBD and PH domain interacting with the catalytic
domain, and is activated via interaction with Rho
GTPases. ROCK1 is preferentially expressed in the liver,
lung, spleen, testes, and kidney. It mediates signaling
from Rho to the actin cytoskeleton. It is implicated in
the development of cardiac fibrosis, cardiomyocyte
apoptosis, and hyperglycemia. Mice deficient with ROCK1
display eyelids open at birth (EOB) and omphalocele
phenotypes due to the disorganization of actin filaments
in the eyelids and the umbilical ring.
Length = 371
Score = 33.5 bits (76), Expect = 0.010
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 3 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
D + WE LR+ + P++P + S D+SNFD+ D+ +FP
Sbjct: 310 DQWAWETLRDT--VAPVVPDLSSDIDTSNFDDIEEDKGEEETFP 351
Score = 31.5 bits (71), Expect = 0.055
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 51 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQ 87
D + WE LR+ + P++P + S D+SNFD+ D+
Sbjct: 310 DQWAWETLRDT--VAPVVPDLSSDIDTSNFDDIEEDK 344
>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein
Serine/Threonine Kinase, DMPK-related cell division
control protein 42 binding kinase alpha.
Serine/Threonine Kinases (STKs), DMPK-like subfamily,
DMPK-related cell division control protein 42 (Cdc42)
binding kinase (MRCK) alpha isoform, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The DMPK-like subfamily
is part of a larger superfamily that includes the
catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. MRCK is activated via interaction with the
small GTPase Cdc42. MRCK/Cdc42 signaling mediates
myosin-dependent cell motility. MRCKalpha is expressed
ubiquitously in many tissues. It plays a role in the
regulation of peripheral actin reorganization and
neurite outgrowth. It may also play a role in the
transferrin iron uptake pathway.
Length = 332
Score = 33.1 bits (75), Expect = 0.013
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
+F G +W+ +RN P +P++ S TD+SNFD
Sbjct: 268 FFTGIDWDNIRNCE--APYIPEVSSPTDTSNFD 298
Score = 33.1 bits (75), Expect = 0.013
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F G +W+ +RN P +P++ S TD+SNFD
Sbjct: 268 FFTGIDWDNIRNCE--APYIPEVSSPTDTSNFD 298
>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of
cAMP-dependent protein kinase-like Protein
Serine/Threonine Kinases. Serine/Threonine Kinases
(STKs), Fission yeast Suppressor of loss of
cAMP-dependent protein kinase (Sck1)-like subfamily,
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The Sck1-like subfamily
is part of a larger superfamily that includes the
catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. This subfamily is composed of fungal proteins
with similarity to the Schizosaccharomyces pombe STK
Sck1. Sck1 plays a role in trehalase activation
triggered by glucose and a nitrogen source. Trehalase
catalyzes the cleavage of the disaccharide trehalose to
glucose. Trehalose, as a carbohydrate reserve and stress
metabolite, plays an important role in the response of
yeast to environmental changes.
Length = 330
Score = 33.0 bits (75), Expect = 0.016
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
+F +W+ L + + PP P + S D SNFD
Sbjct: 255 FFADIDWDLLSKKQITPPFKPIVDSDEDVSNFD 287
Score = 33.0 bits (75), Expect = 0.016
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F +W+ L + + PP P + S D SNFD
Sbjct: 255 FFADIDWDLLSKKQITPPFKPIVDSDEDVSNFD 287
>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein
Serine/Threonine Kinase, Serum- and
Glucocorticoid-induced Kinase 3. Serine/Threonine
Kinases (STKs), Serum- and Glucocorticoid-induced Kinase
(SGK) subfamily, SGK3 isoform, catalytic (c) domain.
STKs catalyze the transfer of the gamma-phosphoryl group
from ATP to serine/threonine residues on protein
substrates. The SGK subfamily is part of a larger
superfamily that includes the catalytic domains of other
protein STKs, protein tyrosine kinases, RIO kinases,
aminoglycoside phosphotransferase, choline kinase, and
phosphoinositide 3-kinase. There are three isoforms of
SGK, named SGK1, SGK2, and SGK3 (also called
cytokine-independent survival kinase CISK). SGK3 is
expressed in most tissues and is most abundant in the
embryo and adult heart and spleen. It was originally
discovered in a screen for antiapoptotic genes. It
phosphorylates and inhibits the proapoptotic proteins,
Bad and FKHRL1. SGK3 also regulates many transporters,
ion channels, and receptors. It plays a critical role in
hair follicle morphogenesis and hair cycling.
Length = 325
Score = 32.7 bits (74), Expect = 0.017
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
+F+ +W L + + PP P + D SNFD
Sbjct: 253 FFESLSWTDLEQKKIPPPFNPNVEGPDDISNFD 285
Score = 32.7 bits (74), Expect = 0.017
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F+ +W L + + PP P + D SNFD
Sbjct: 253 FFESLSWTDLEQKKIPPPFNPNVEGPDDISNFD 285
>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic
subunit; Provisional.
Length = 340
Score = 31.5 bits (71), Expect = 0.050
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAI 41
WF +W L ++ + P PK ++ DSSNF+ D I
Sbjct: 286 WFGNIDWVSLLHKNVEVPYKPKYKNVFDSSNFERVQEDLTI 326
Score = 30.7 bits (69), Expect = 0.081
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
WF +W L ++ + P PK ++ DSSNF+ +D AD +T + F
Sbjct: 286 WFGNIDWVSLLHKNVEVPYKPKYKNVFDSSNFERV--QEDLTIADKITNENDPF 337
>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein
Serine/Threonine Kinase, Microtubule-associated
serine/threonine-like kinase. Serine/Threonine Kinases
(STKs), Microtubule-associated serine/threonine (MAST)
kinase subfamily, MAST-like (MASTL) kinases, catalytic
(c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The MAST kinase
subfamily is part of a larger superfamily that includes
the catalytic domains of other protein STKs, protein
tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. MAST kinases contain an N-terminal domain of
unknown function, a central catalytic domain, and a
C-terminal PDZ domain that mediates protein-protein
interactions. The MASTL kinases in this group carry only
a catalytic domain, which contains a long insertion
relative to MAST kinases. The human MASTL gene has also
been labelled FLJ14813. A missense mutation in FLJ14813
is associated with autosomal dominant thrombocytopenia.
To date, the function of MASTL is unknown.
Length = 669
Score = 30.6 bits (69), Expect = 0.100
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 48 RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
F G +WE L+N+T P +P+ +TD+S F+
Sbjct: 635 PLFHGVDWENLQNQT--MPFIPQPDDETDTSYFE 666
Score = 30.2 bits (68), Expect = 0.15
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 2 FDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
F G +WE L+N+T P +P+ +TD+S F+
Sbjct: 637 FHGVDWENLQNQT--MPFIPQPDDETDTSYFE 666
>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein
Serine/Threonine Kinase, Atypical Protein Kinase C.
Serine/Threonine Kinases (STKs), Atypical Protein Kinase
C (aPKC) subfamily, catalytic (c) domain. STKs catalyze
the transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The
aPKC subfamily is part of a larger superfamily that
includes the catalytic domains of other protein STKs,
protein tyrosine kinases, RIO kinases, aminoglycoside
phosphotransferase, choline kinase, and phosphoinositide
3-kinase. PKCs are classified into three groups
(classical, atypical, and novel) depending on their mode
of activation and the structural characteristics of
their regulatory domain. aPKCs only require
phosphatidylserine (PS) for activation. They contain a
C2-like region, instead of a calcium-binding (C2) region
found in classical PKCs, in their regulatory domain.
There are two aPKC isoforms, zeta and iota. aPKCs are
involved in many cellular functions including
proliferation, migration, apoptosis, polarity
maintenance and cytoskeletal regulation. They also play
a critical role in the regulation of glucose metabolism
and in the pathogenesis of type 2 diabetes.
Length = 329
Score = 30.6 bits (69), Expect = 0.12
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLS 44
+F +W+ L + ++PP P I S D NFD D+ + L+
Sbjct: 264 FFRNIDWDLLEQKQVLPPYKPNIESDRDLDNFDPQFTDEPVQLT 307
Score = 29.4 bits (66), Expect = 0.23
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F +W+ L + ++PP P I S D NFD
Sbjct: 264 FFRNIDWDLLEQKQVLPPYKPNIESDRDLDNFD 296
>gnl|CDD|206402 pfam14234, DUF4336, Domain of unknown function (DUF4336).
Length = 314
Score = 29.9 bits (68), Expect = 0.18
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 36 PPDQAIFLSFPCRWFDGF--NWEGLRNRTLIPPIL 68
P ++ F FP RW G+ +++ LR R + PIL
Sbjct: 231 PGLRSKFGLFPFRWQPGWQASFQALRGRLQVAPIL 265
>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein
Serine/Threonine Kinase, Serum- and
Glucocorticoid-induced Kinase 1. Serine/Threonine
Kinases (STKs), Serum- and Glucocorticoid-induced Kinase
(SGK) subfamily, SGK1 isoform, catalytic (c) domain.
STKs catalyze the transfer of the gamma-phosphoryl group
from ATP to serine/threonine residues on protein
substrates. The SGK subfamily is part of a larger
superfamily that includes the catalytic domains of other
protein STKs, protein tyrosine kinases, RIO kinases,
aminoglycoside phosphotransferase, choline kinase, and
phosphoinositide 3-kinase. There are three isoforms of
SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously
expressed and is under transcriptional control of
numerous stimuli including cell stress (cell shrinkage),
serum, hormones (gluco- and mineralocorticoids),
gonadotropins, growth factors, interleukin-6, and other
cytokines. It plays roles in sodium retention and
potassium elimination in the kidney, nutrient transport,
salt sensitivity, memory consolidation, and cardiac
repolarization. A common SGK1 variant is associated with
increased blood pressure and body weight. SGK1 may also
contribute to tumor growth, neurodegeneration, fibrosing
disease, and ischemia.
Length = 325
Score = 29.6 bits (66), Expect = 0.20
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPA 92
+F NW+ L N+ + PP P + D +FD ++ P +
Sbjct: 253 FFSPINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEPVPNS 296
Score = 29.2 bits (65), Expect = 0.29
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
+F NW+ L N+ + PP P + D +FD
Sbjct: 253 FFSPINWDDLINKKITPPFNPNVSGPNDLRHFD 285
>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein
Serine/Threonine Kinase, Large Tumor Suppressor 1.
Serine/Threonine Kinases (STKs), Large Tumor Suppressor
(LATS) subfamily, LATS1 isoform, catalytic (c) domain.
STKs catalyze the transfer of the gamma-phosphoryl group
from ATP to serine/threonine residues on protein
substrates. The LATS subfamily is part of a larger
superfamily that includes the catalytic domains of other
protein STKs, protein tyrosine kinases, RIO kinases,
aminoglycoside phosphotransferase, choline kinase, and
phosphoinositide 3-kinase. LATS functions as a tumor
suppressor and is implicated in cell cycle regulation.
Inactivation of LATS1 in mice results in the development
of various tumors, including sarcomas and ovarian
cancer. Promoter methylation, loss of heterozygosity,
and missense mutations targeting the LATS1 gene have
also been found in human sarcomas and ovarian cancers.
In addition, decreased expression of LATS1 is associated
with an aggressive phenotype and poor prognosis. LATS1
induces G2 arrest and promotes cytokinesis. It may be a
component of the mitotic exit network in higher
eukaryotes.
Length = 382
Score = 29.6 bits (66), Expect = 0.20
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
Query: 66 PILPKIRSQTDSSNFDEYPPDQ-------DPPPADDLTGW 98
P +PKI TD+SNFD PD+ + D L GW
Sbjct: 323 PYIPKITHPTDTSNFDPVDPDKLWSDDDKEGNVNDTLNGW 362
Score = 28.0 bits (62), Expect = 0.86
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 18 PILPKIRSQTDSSNFDEYPPDQ 39
P +PKI TD+SNFD PD+
Sbjct: 323 PYIPKITHPTDTSNFDPVDPDK 344
>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein
Serine/Threonine Kinase, Large Tumor Suppressor 2.
Serine/Threonine Kinases (STKs), Large Tumor Suppressor
(LATS) subfamily, LATS2 isoform, catalytic (c) domain.
STKs catalyze the transfer of the gamma-phosphoryl group
from ATP to serine/threonine residues on protein
substrates. The LATS subfamily is part of a larger
superfamily that includes the catalytic domains of other
protein STKs, protein tyrosine kinases, RIO kinases,
aminoglycoside phosphotransferase, choline kinase, and
phosphoinositide 3-kinase. LATS functions as a tumor
suppressor and is implicated in cell cycle regulation.
LATS2 is an essential mitotic regulator responsible for
coordinating accurate cytokinesis completion and
governing the stabilization of other mitotic regulators.
It is also critical in the maintenance of proper
chromosome number, genomic stability, mitotic fidelity,
and the integrity of centrosome duplication.
Downregulation of LATS2 is associated with poor
prognosis in acute lymphoblastic leukemia and breast
cancer.
Length = 381
Score = 29.6 bits (66), Expect = 0.24
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Query: 61 RTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTG----WD 99
RT P +PKI D+SNFD P +++ P D WD
Sbjct: 318 RTQPAPYVPKISHPMDTSNFD--PVEEESPWNDASGDSTRTWD 358
>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein
Serine/Threonine Kinase, Serum- and
Glucocorticoid-induced Kinase 2. Serine/Threonine
Kinases (STKs), Serum- and Glucocorticoid-induced Kinase
(SGK) subfamily, SGK2 isoform, catalytic (c) domain.
STKs catalyze the transfer of the gamma-phosphoryl group
from ATP to serine/threonine residues on protein
substrates. The SGK subfamily is part of a larger
superfamily that includes the catalytic domains of other
protein STKs, protein tyrosine kinases, RIO kinases,
aminoglycoside phosphotransferase, choline kinase, and
phosphoinositide 3-kinase. There are three isoforms of
SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more
restricted distribution that SGK1 and is most abundantly
expressed in epithelial tissues including kidney, liver,
pancreas, and the choroid plexus of the brain. In vitro
cellular assays show that SGK2 can stimulate the
activity of ion channels, the glutamate transporter
EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Length = 321
Score = 29.2 bits (65), Expect = 0.33
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPC 47
+F NW+ L ++ + PP P + D +FD +A+ S
Sbjct: 253 FFSPINWDDLYHKRITPPYNPNVAGPADLRHFDPEFTQEAVSSSVGQ 299
Score = 28.8 bits (64), Expect = 0.41
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F NW+ L ++ + PP P + D +FD
Sbjct: 253 FFSPINWDDLYHKRITPPYNPNVAGPADLRHFD 285
>gnl|CDD|165021 PHA02638, PHA02638, CC chemokine receptor-like protein;
Provisional.
Length = 417
Score = 28.4 bits (63), Expect = 0.61
Identities = 11/61 (18%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 14 TLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWE--GLRNRTLIPPILPKI 71
+IP +P S + +SN + +++ + + +E ++N+ + P I I
Sbjct: 42 EIIPTEIPTSESPSPNSNSSSSSSSSSSSITYDYEYENNITYELINIKNKCMYPSISEYI 101
Query: 72 R 72
+
Sbjct: 102 K 102
>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein
Serine/Threonine Kinase, cGMP-dependent protein kinase.
Serine/Threonine Kinases (STKs), cGMP-dependent protein
kinase (cGK or PKG) subfamily, catalytic (c) domain.
STKs catalyze the transfer of the gamma-phosphoryl group
from ATP to serine/threonine residues on protein
substrates. The cGK subfamily is part of a larger
superfamily that includes the catalytic domains of other
protein STKs, protein tyrosine kinases, RIO kinases,
aminoglycoside phosphotransferase, choline kinase, and
phosphoinositide 3-kinase. Mammals have two cGK isoforms
from different genes, cGKI and cGKII. cGKI exists as two
splice variants, cGKI-alpha and cGKI-beta. cGK consists
of an N-terminal regulatory domain containing a
dimerization and an autoinhibitory pseudosubstrate
region, two cGMP-binding domains, and a C-terminal
catalytic domain. Binding of cGMP to both binding sites
releases the inhibition of the catalytic center by the
pseudosubstrate region, allowing autophosphorylation and
activation of the kinase. cGKI is a soluble protein
expressed in all smooth muscles, platelets, cerebellum,
and kidney. It is also expressed at lower concentrations
in other tissues. cGKII is a membrane-bound protein that
is most abundantly expressed in the intestine. It is
also present in the brain nuclei, adrenal cortex,
kidney, lung, and prostate. cGKI is involved in the
regulation of smooth muscle tone, smooth cell
proliferation, and platelet activation. cGKII plays a
role in the regulation of secretion, such as renin
secretion by the kidney and aldosterone secretion by the
adrenal. It also regulates bone growth and the circadian
rhythm.
Length = 262
Score = 28.0 bits (63), Expect = 0.69
Identities = 7/10 (70%), Positives = 10/10 (100%)
Query: 48 RWFDGFNWEG 57
+WF+GF+WEG
Sbjct: 253 KWFNGFDWEG 262
Score = 26.8 bits (60), Expect = 1.8
Identities = 7/9 (77%), Positives = 9/9 (100%)
Query: 1 WFDGFNWEG 9
WF+GF+WEG
Sbjct: 254 WFNGFDWEG 262
>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein
Serine/Threonine Kinase, Mitogen and stress-activated
kinase. Serine/Threonine Kinases (STKs), Mitogen and
stress-activated kinase (MSK) subfamily, N-terminal
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The MSK subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. MSKs contain an
N-terminal kinase domain (NTD) from the AGC family and a
C-terminal kinase domain (CTD) from the CAMK family,
similar to 90 kDa ribosomal protein S6 kinases (RSKs).
MSKs are activated by two major signaling cascades, the
Ras-MAPK and p38 stress kinase pathways, in response to
various stimuli such as growth factors, hormones,
neurotransmitters, cellular stress, and pro-inflammatory
cytokines. This triggers phosphorylation in the
activation loop (A-loop) of the CTD of MSK. The active
CTD phosphorylates the hydrophobic motif (HM) in the
C-terminal extension of NTD, which facilitates the
phosphorylation of the A-loop and activates the NTD,
which in turn phosphorylates downstream targets. MSKs
are predominantly nuclear proteins. They are widely
expressed in many tissues including heart, brain, lung,
liver, kidney, and pancreas. There are two isoforms of
MSK, called MSK1 and MSK2.
Length = 288
Score = 28.2 bits (63), Expect = 0.70
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 1 WFDGFNWEGLRNRTLIPPILP 21
+F G +W+ L + + P P
Sbjct: 268 FFQGIDWDDLAAKRIPAPFKP 288
Score = 28.2 bits (63), Expect = 0.70
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 49 WFDGFNWEGLRNRTLIPPILP 69
+F G +W+ L + + P P
Sbjct: 268 FFQGIDWDDLAAKRIPAPFKP 288
>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of
Phototropin-like Protein Serine/Threonine Kinases.
Serine/Threonine Kinases (STKs), Phototropin-like
subfamily, catalytic (c) domain. STKs catalyze the
transfer of the gamma-phosphoryl group from ATP to
serine/threonine residues on protein substrates. The
phototropin-like subfamily is part of a larger
superfamily that includes the catalytic domains of other
protein STKs, protein tyrosine kinases, RIO kinases,
aminoglycoside phosphotransferase, choline kinase, and
phosphoinositide 3-kinase. Included in this subfamily
are plant phototropins and predominantly uncharacterized
fungal STKs whose catalytic domains resemble the
phototropin kinase domain. One protein from Neurospora
crassa is called nrc-2. Phototropins are blue-light
receptors that control responses such as phototropism,
stromatal opening, and chloroplast movement in order to
optimize the photosynthetic efficiency of plants. They
are light-activated STKs that contain an N-terminal
photosensory domain and a C-terminal catalytic domain.
The N-terminal domain contains two LOV (Light, Oxygen or
Voltage) domains that binds FMN. Photoexcitation of the
LOV domains results in autophosphorylation at multiple
sites and activation of the catalytic domain. Neurospora
crassa nrc-2 plays a role in growth and development by
controlling entry into the conidiation program.
Length = 316
Score = 28.0 bits (63), Expect = 0.81
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Query: 1 WFDGFNWEGLRNRTLIPPILPK 22
+F G NW +R+ T PPI+P+
Sbjct: 291 FFRGVNWALIRHTT--PPIIPR 310
Score = 28.0 bits (63), Expect = 0.81
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
Query: 49 WFDGFNWEGLRNRTLIPPILPK 70
+F G NW +R+ T PPI+P+
Sbjct: 291 FFRGVNWALIRHTT--PPIIPR 310
>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein
Serine/Threonine Kinase, Atypical Protein Kinase C iota.
Serine/Threonine Kinases (STKs), Atypical Protein
Kinase C (aPKC) subfamily, iota isoform, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The aPKC subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. PKCs are
classified into three groups (classical, atypical, and
novel) depending on their mode of activation and the
structural characteristics of their regulatory domain.
aPKCs only require phosphatidylserine (PS) for
activation. There are two aPKC isoforms, zeta and iota.
PKC-iota is directly implicated in carcinogenesis. It is
critical to oncogenic signaling mediated by Ras and
Bcr-Abl. The PKC-iota gene is the target of
tumor-specific gene amplification in many human cancers,
and has been identified as a human oncogene. In addition
to its role in transformed growth, PKC-iota also
promotes invasion, chemoresistance, and tumor cell
survival. Expression profiling of PKC-iota is a
prognostic marker of poor clinical outcome in several
human cancers. PKC-iota also plays a role in
establishing cell polarity, and has critical embryonic
functions.
Length = 329
Score = 27.3 bits (60), Expect = 1.2
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQAIFLSFPCRWFD 51
+F +W+ + + ++PP P I + NFD P D I F+
Sbjct: 264 FFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFDAQFTNEPVQLTPDDDDIVRKIDQSEFE 323
Query: 52 GFNW 55
GF +
Sbjct: 324 GFEY 327
Score = 26.6 bits (58), Expect = 2.8
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F +W+ + + ++PP P I + NFD
Sbjct: 264 FFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFD 296
>gnl|CDD|227762 COG5475, COG5475, Uncharacterized small protein [Function
unknown].
Length = 60
Score = 25.7 bits (56), Expect = 1.6
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 44 SFPCRWFDGFN--WEGLRNRTLIPPILPKIR 72
+ CRWFDG+ E L+P +
Sbjct: 30 MYECRWFDGYGVKREAFHEDELVPGEASRSA 60
>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear
Dbf2-Related kinase-like Protein Serine/Threonine
Kinases. Serine/Threonine Kinases (STKs), NDR kinase
subfamily, fungal NDR-like proteins, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The NDR subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. This group is
composed of fungal NDR-like proteins including
Saccharomyces cerevisiae CBK1 (or CBK1p),
Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago
maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like
NDR kinase, group members contain an N-terminal
regulatory (NTR) domain and an insert within the
catalytic domain that contains an auto-inhibitory
sequence. CBK1 is an essential component in the RAM
(regulation of Ace2p activity and cellular
morphogenesis) network. CBK1 and Orb6 play similar roles
in coordinating cell morphology with cell cycle
progression. Ukc1 is involved in morphogenesis,
pathogenicity, and pigment formation. Cot1 plays a role
in polar tip extension.
Length = 377
Score = 27.1 bits (60), Expect = 1.7
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNF--DEYPPDQDPP 90
+F G +W+ +R + P +P+++S TD+S F DE + P
Sbjct: 307 FFRGVDWDTIRQ--IRAPFIPQLKSITDTSYFPTDELEQVPEAP 348
Score = 25.6 bits (56), Expect = 5.5
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNF--DEYPP 37
+F G +W+ +R + P +P+++S TD+S F DE
Sbjct: 307 FFRGVDWDTIRQ--IRAPFIPQLKSITDTSYFPTDELEQ 343
>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein
Serine/Threonine Kinase, Atypical Protein Kinase C zeta.
Serine/Threonine Kinases (STKs), Atypical Protein
Kinase C (aPKC) subfamily, zeta isoform, catalytic (c)
domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The aPKC subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. PKCs are
classified into three groups (classical, atypical, and
novel) depending on their mode of activation and the
structural characteristics of their regulatory domain.
aPKCs only require phosphatidylserine (PS) for
activation. There are two aPKC isoforms, zeta and iota.
PKC-zeta plays a critical role in activating the glucose
transport response. It is activated by glucose, insulin,
and exercise through diverse pathways. PKC-zeta also
plays a central role in maintaining cell polarity in
yeast and mammalian cells. In addition, it affects actin
remodeling in muscle cells.
Length = 327
Score = 26.5 bits (58), Expect = 2.3
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
+F +W+ L + + PP P+I NFD P D+ + F+
Sbjct: 262 FFRSIDWDLLEKKQVTPPFKPQITDDYGLENFDTQFTSEPVQLTPDDEDVIKRIDQSEFE 321
Query: 52 GFNW 55
GF +
Sbjct: 322 GFEY 325
Score = 26.1 bits (57), Expect = 3.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F +W+ L + + PP P+I NFD
Sbjct: 262 FFRSIDWDLLEKKQVTPPFKPQITDDYGLENFD 294
>gnl|CDD|215917 pfam00433, Pkinase_C, Protein kinase C terminal domain.
Length = 47
Score = 24.9 bits (55), Expect = 3.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 22 KIRSQTDSSNFDEYPPDQAIFLSFP 46
K++S TD+SNFD + LS P
Sbjct: 1 KVKSPTDTSNFDPEFTSEPPKLSPP 25
>gnl|CDD|212127 cd10816, GH57N_BE_TK1436_like, N-terminal catalytic domain of Gh57
branching enzyme TK 1436 and similar proteins. The
subfamily is represented by a novel branching-enzyme
TK1436 of hyperthermophilic archaeon Thermococcus
kodakaraensis KOD1. Branching enzymes (BEs, EC 2.4.1.18)
play a key role in synthesis of alpha-glucans and they
generally are classified into glycoside hydrolase family
13 (GH13). However, TK1436 belongs to the GH57 family.
It functions as a monomer and possesses BE activity.
TK1436 is composed of a distorted N-terminal
(beta/alpha)7-barrel domain and a C-terminal five
alpha-helical domain, both of which participate in the
formation of the active-site cleft.
Length = 423
Score = 26.3 bits (58), Expect = 3.3
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFL 43
WF+G W R L PK+ T S ++YPP ++I L
Sbjct: 367 WFEGVQWLEAVLRLLHQN--PKVELTTASEYLEQYPPAESIAL 407
Score = 25.5 bits (56), Expect = 6.2
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPP 85
WF+G W R L PK+ T S ++YPP
Sbjct: 367 WFEGVQWLEAVLRLLHQN--PKVELTTASEYLEQYPP 401
>gnl|CDD|220652 pfam10250, O-FucT, GDP-fucose protein O-fucosyltransferase. This
is a family of conserved proteins representing the
enzyme responsible for adding O-fucose to EGF
(epidermal growth factor-like) repeats. Six highly
conserved cysteines are present in O-FucT-1 as well as
a DXD-like motif (ERD), conserved in mammals,
Drosophila, and C. elegans. Both features are
characteristic of several glycosyltransferase families.
The enzyme is a membrane-bound protein released by
proteolysis and, as for most glycosyltransferases, is
strongly activated by manganese.
Length = 315
Score = 26.1 bits (58), Expect = 3.9
Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 26/88 (29%)
Query: 12 NRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTL-------- 63
N TL+ P ++ D S F ++ F+ E +
Sbjct: 28 NATLVLPPWDELYHWKDPSKFSDF-----------------FDVEHFISYLSRVVEIVKF 70
Query: 64 IPPILPK-IRSQTDSSNFDEYPPDQDPP 90
+P LP R Q D+ D Q P
Sbjct: 71 LPKELPSAKRLQYDTFKVDFRVCVQSSP 98
>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein
Serine/Threonine Kinase, 90 kDa ribosomal protein S6
kinase. Serine/Threonine Kinases (STKs), 90 kDa
ribosomal protein S6 kinase (RSK) subfamily, N-terminal
catalytic (c) domain. STKs catalyze the transfer of the
gamma-phosphoryl group from ATP to serine/threonine
residues on protein substrates. The RSK subfamily is
part of a larger superfamily that includes the catalytic
domains of other protein STKs, protein tyrosine kinases,
RIO kinases, aminoglycoside phosphotransferase, choline
kinase, and phosphoinositide 3-kinase. RSKs contain an
N-terminal kinase domain (NTD) from the AGC family and a
C-terminal kinase domain (CTD) from the CAMK family.
They are activated by signaling inputs from
extracellular regulated kinase (ERK) and
phosphoinositide dependent kinase 1 (PDK1). ERK
phosphorylates and activates the CTD of RSK, serving as
a docking site for PDK1, which phosphorylates and
activates the NTD, which in turn phosphorylates all
known RSK substrates. RSKs act as downstream effectors
of mitogen-activated protein kinase (MAPK) and play key
roles in mitogen-activated cell growth, differentiation,
and survival. Mammals possess four RSK isoforms (RSK1-4)
from distinct genes. RSK proteins are also referred to
as MAP kinase-activated protein kinases (MAPKAPKs),
p90-RSKs, or p90S6Ks.
Length = 318
Score = 25.5 bits (56), Expect = 5.1
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
+F +W L R + PP P + D+ FD
Sbjct: 256 FFSTIDWNKLYRREIKPPFKPAVGRPDDTFYFD 288
Score = 25.5 bits (56), Expect = 5.1
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 49 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
+F +W L R + PP P + D+ FD
Sbjct: 256 FFSTIDWNKLYRREIKPPFKPAVGRPDDTFYFD 288
>gnl|CDD|191511 pfam06409, NPIP, Nuclear pore complex interacting protein (NPIP).
This family consists of a series of primate specific
nuclear pore complex interacting protein (NPIP)
sequences. The function of this family is unknown but is
well conserved from African apes to humans.
Length = 350
Score = 25.2 bits (54), Expect = 7.9
Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Query: 8 EGLRNRT-LIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPP 66
E L+NR PP + S D+S + PP+ + P + L+ P
Sbjct: 237 ETLKNRMGHQPPPPTQQHSIIDNSLSLKTPPECLLTPLPPSALPSADDNLKTPAECLLRP 296
Query: 67 ILPKIRSQTDSSNFDEYPPDQDPPPADD 94
+ P PP PP DD
Sbjct: 297 LPPSADDNIKECPLALKPPPPLPPSVDD 324
>gnl|CDD|235309 PRK04596, minC, septum formation inhibitor; Reviewed.
Length = 248
Score = 24.9 bits (54), Expect = 8.0
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 66 PILPKIRSQTDSSNFDEYPPDQDPPP 91
P+L K R+Q + + PP PP
Sbjct: 103 PLLAKFRAQYERAAVSPPPPPPPPPA 128
>gnl|CDD|215474 PLN02877, PLN02877, alpha-amylase/limit dextrinase.
Length = 970
Score = 25.1 bits (55), Expect = 9.2
Identities = 11/50 (22%), Positives = 12/50 (24%), Gaps = 1/50 (2%)
Query: 48 RWFDGFNWEGLRNRTLIPPILPKI-RSQTDSSNFDEYPPDQDPPPADDLT 96
F R R L R + SS F DDL
Sbjct: 44 ISFVAHRGRNFRVRIPSATSLAMATRPSSASSFFTLELSVPTSLFQDDLL 93
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.143 0.499
Gapped
Lambda K H
0.267 0.0704 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 5,604,610
Number of extensions: 463778
Number of successful extensions: 500
Number of sequences better than 10.0: 1
Number of HSP's gapped: 486
Number of HSP's successfully gapped: 125
Length of query: 102
Length of database: 10,937,602
Length adjustment: 68
Effective length of query: 34
Effective length of database: 7,921,530
Effective search space: 269332020
Effective search space used: 269332020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (24.2 bits)