Your job contains 1 sequence.
>psy17574
PGKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSK
ENFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKIFRTRPCILAEMK
DKLLRLLLVQSQTQIIASGCPLD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17574
(143 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0020307 - symbol:dve "defective proventriculus" sp... 345 3.4e-30 1
UNIPROTKB|C9JP21 - symbol:SATB1 "DNA-binding protein SATB... 145 3.2e-10 1
UNIPROTKB|E1BRH4 - symbol:SATB1 "Uncharacterized protein"... 148 2.5e-09 1
WB|WBGene00022861 - symbol:dve-1 species:6239 "Caenorhabd... 145 2.6e-09 1
UNIPROTKB|C9JGL9 - symbol:SATB1 "DNA-binding protein SATB... 136 2.9e-09 1
UNIPROTKB|F1PLB0 - symbol:SATB1 "Uncharacterized protein"... 145 4.8e-09 1
UNIPROTKB|A7MB41 - symbol:SATB1 "Uncharacterized protein"... 145 5.4e-09 1
UNIPROTKB|Q01826 - symbol:SATB1 "DNA-binding protein SATB... 145 5.4e-09 1
MGI|MGI:105084 - symbol:Satb1 "special AT-rich sequence b... 145 5.4e-09 1
RGD|1305561 - symbol:Satb1 "SATB homeobox 1" species:1011... 145 5.4e-09 1
ZFIN|ZDB-GENE-031010-36 - symbol:satb1a "SATB homeobox 1a... 136 4.7e-08 1
UNIPROTKB|H0YL78 - symbol:SATB1 "DNA-binding protein SATB... 123 6.8e-08 1
UNIPROTKB|H0YNA6 - symbol:SATB1 "DNA-binding protein SATB... 123 6.8e-08 1
UNIPROTKB|J9NRQ8 - symbol:SATB2 "Uncharacterized protein"... 134 7.7e-08 1
UNIPROTKB|Q9UPW6 - symbol:SATB2 "DNA-binding protein SATB... 134 7.7e-08 1
MGI|MGI:2679336 - symbol:Satb2 "special AT-rich sequence ... 134 7.7e-08 1
RGD|1562369 - symbol:Satb2 "SATB homeobox 2" species:1011... 134 7.7e-08 1
UNIPROTKB|F1RS63 - symbol:SATB1 "Uncharacterized protein"... 134 8.1e-08 1
UNIPROTKB|F1Q2V6 - symbol:SATB2 "Uncharacterized protein"... 134 8.1e-08 1
UNIPROTKB|F1N426 - symbol:SATB2 "Uncharacterized protein"... 134 8.1e-08 1
UNIPROTKB|E1BZL3 - symbol:SATB2 "Uncharacterized protein"... 132 1.3e-07 1
ZFIN|ZDB-GENE-070912-212 - symbol:satb2 "SATB homeobox 2"... 131 2.0e-07 1
>FB|FBgn0020307 [details] [associations]
symbol:dve "defective proventriculus" species:7227
"Drosophila melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS;TAS] [GO:0007494 "midgut development"
evidence=IMP] [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS;TAS] [GO:0003680 "AT DNA binding" evidence=ISS]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0016348 "imaginal disc-derived leg joint
morphogenesis" evidence=IMP] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEP]
[GO:0015677 "copper ion import" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0007494 GO:GO:0000122
GO:GO:0007476 HSSP:P10037 GO:GO:0015677 GO:GO:0016348
FlyBase:FBgn0020307 GeneTree:ENSGT00520000061199 UniGene:Dm.4765
GeneID:37546 KEGG:dme:Dmel_CG5799 CTD:37546 GenomeRNAi:37546
NextBio:804202 EMBL:BT025086 RefSeq:NP_477242.1 SMR:Q9W268
STRING:Q9W268 EnsemblMetazoa:FBtr0071775 UCSC:CG5799-RA
InParanoid:Q9W268 OMA:SKVNPKS Uniprot:Q9W268
Length = 1024
Score = 345 (126.5 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 72/145 (49%), Positives = 101/145 (69%)
Query: 3 KSLPVHCVVEAVYSVHHWKSAKN----SRKAILETDTYVITPTNTNFQDLVPVALQRLGY 58
KSLP+HCVVE+V+S+H + R+ +ETD+YVI T + ++V ALQRLGY
Sbjct: 250 KSLPLHCVVESVHSLHASLTIDTRQPWKRRPNIETDSYVIIAAATPWSEIVQTALQRLGY 309
Query: 59 SKENFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKIFRTRPCILAE 118
S+E +A+G + IK+WKPI + +IS+NPA V DI+GELT+V TLRI I R + E
Sbjct: 310 SQEVANTARGSLIIKHWKPIPLEQISDNPAVPVSDIVGELTSVITLRIVILRPKTSPFGE 369
Query: 119 MKDKLLRLLLVQSQTQIIASGCPLD 143
+KDKLL+LL++QS + ++GCPLD
Sbjct: 370 IKDKLLKLLVLQSHAVLRSTGCPLD 394
>UNIPROTKB|C9JP21 [details] [associations]
symbol:SATB1 "DNA-binding protein SATB1" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008544 "epidermis development" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0016571 "histone methylation"
evidence=IEA] [GO:0043367 "CD4-positive, alpha-beta T cell
differentiation" evidence=IEA] [GO:0043374 "CD8-positive,
alpha-beta T cell differentiation" evidence=IEA] [GO:0050798
"activated T cell proliferation" evidence=IEA] [GO:0060004 "reflex"
evidence=IEA] GO:GO:0003677 GO:GO:0005720 GO:GO:0003700
GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0016363
GO:GO:0008544 GO:GO:0050798 GO:GO:0016571 GO:GO:0043374
GO:GO:0043367 EMBL:AC139618 EMBL:AC144521 HGNC:HGNC:10541
HOGENOM:HOG000004805 ChiTaRS:SATB1 GO:GO:0060004 IPI:IPI00926916
ProteinModelPortal:C9JP21 SMR:C9JP21 STRING:C9JP21
Ensembl:ENST00000440737 ArrayExpress:C9JP21 Bgee:C9JP21
Uniprot:C9JP21
Length = 224
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/107 (32%), Positives = 57/107 (53%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G LPV CVVE H+ + + K E +V+ + F L+ +AL LGYS
Sbjct: 71 GTMLPVFCVVE-----HYENAIEYDCKE--EHAEFVLVRKDMLFNQLIEMALLSLGYSHS 123
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI 108
+ AKG + + W P+ +S +++ P TV D+L ++ V TL+I++
Sbjct: 124 SAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQL 170
>UNIPROTKB|E1BRH4 [details] [associations]
symbol:SATB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0008544 "epidermis development" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0016571 "histone
methylation" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0043367 "CD4-positive, alpha-beta T cell differentiation"
evidence=IEA] [GO:0043374 "CD8-positive, alpha-beta T cell
differentiation" evidence=IEA] [GO:0050798 "activated T cell
proliferation" evidence=IEA] [GO:0060004 "reflex" evidence=IEA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0016605 GO:GO:0043565
GO:GO:0005720 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000122 GO:GO:0016363
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0050798 GO:GO:0016571
OMA:HLMKTNL GO:GO:0060004 GeneTree:ENSGT00390000008096
EMBL:AADN02001047 IPI:IPI00581259 Ensembl:ENSGALT00000018362
Uniprot:E1BRH4
Length = 756
Score = 148 (57.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 35/107 (32%), Positives = 57/107 (53%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G LPV CVVE H+ + + K E +V+ + F L+ +AL LGYS
Sbjct: 71 GSMLPVFCVVE-----HYENAIEYDSKE--EHAEFVLVRKDMLFNQLIEMALLSLGYSHS 123
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI 108
+ AKG + + W P+ +S +++ P TV D+L ++ V TL+I++
Sbjct: 124 SAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQL 170
>WB|WBGene00022861 [details] [associations]
symbol:dve-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0051087 "chaperone binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0043565
GO:GO:0000003 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:FO081441 GeneID:180398 KEGG:cel:CELE_ZK1193.5 UCSC:ZK1193.5c
CTD:180398 GeneTree:ENSGT00520000061199 NextBio:909180
RefSeq:NP_001024984.1 ProteinModelPortal:Q86MI0 SMR:Q86MI0
IntAct:Q86MI0 MINT:MINT-1046814 STRING:Q86MI0 PRIDE:Q86MI0
EnsemblMetazoa:ZK1193.5a WormBase:ZK1193.5a HOGENOM:HOG000018497
InParanoid:Q86MI0 OMA:CAYRENY ArrayExpress:Q86MI0 Uniprot:Q86MI0
Length = 468
Score = 145 (56.1 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 41/125 (32%), Positives = 64/125 (51%)
Query: 6 PVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKENFYS 65
P+ +VE V S H + N I TDTY I T LV L LG+S + S
Sbjct: 3 PMRVIVETVRS-QHCLTCSNEGHMI--TDTYAIVAGTTTLNQLVETVLAALGHSSMST-S 58
Query: 66 AKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI-----FRTRPCILAEMK 120
A+G + + NWKP+ +I+EN TV ++ ++++ L+I + CI +E+K
Sbjct: 59 ARGLIQVNNWKPLPFDQITENLDDTVENLFKDISSHVVLKILSKPSTDSNSVQCI-SEVK 117
Query: 121 DKLLR 125
+KLL+
Sbjct: 118 NKLLK 122
>UNIPROTKB|C9JGL9 [details] [associations]
symbol:SATB1 "DNA-binding protein SATB1" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008544 "epidermis development" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0016571 "histone methylation"
evidence=IEA] [GO:0043367 "CD4-positive, alpha-beta T cell
differentiation" evidence=IEA] [GO:0043374 "CD8-positive,
alpha-beta T cell differentiation" evidence=IEA] [GO:0050798
"activated T cell proliferation" evidence=IEA] [GO:0060004 "reflex"
evidence=IEA] GO:GO:0003677 GO:GO:0005720 GO:GO:0003700
GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0016363
GO:GO:0008544 GO:GO:0050798 GO:GO:0016571 GO:GO:0043374
GO:GO:0043367 EMBL:AC139618 EMBL:AC144521 HGNC:HGNC:10541
ChiTaRS:SATB1 GO:GO:0060004 HOGENOM:HOG000213591 IPI:IPI00925809
STRING:C9JGL9 Ensembl:ENST00000415069 ArrayExpress:C9JGL9
Bgee:C9JGL9 Uniprot:C9JGL9
Length = 166
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 34/103 (33%), Positives = 53/103 (51%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G LPV CVVE H+ + + K E +V+ + F L+ +AL LGYS
Sbjct: 71 GTMLPVFCVVE-----HYENAIEYDCKE--EHAEFVLVRKDMLFNQLIEMALLSLGYSHS 123
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATL 104
+ AKG + + W P+ +S +++ P TV D+L ++ V TL
Sbjct: 124 SAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTL 166
>UNIPROTKB|F1PLB0 [details] [associations]
symbol:SATB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003350 InterPro:IPR010982 Pfam:PF02376 PROSITE:PS51042
GO:GO:0003677 Gene3D:1.10.260.40 SUPFAM:SSF47413 OMA:HLMKTNL
GeneTree:ENSGT00390000008096 EMBL:AAEX03013573 EMBL:AAEX03013574
Ensembl:ENSCAFT00000009427 Uniprot:F1PLB0
Length = 696
Score = 145 (56.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 35/107 (32%), Positives = 57/107 (53%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G LPV CVVE H+ + + K E +V+ + F L+ +AL LGYS
Sbjct: 71 GTMLPVFCVVE-----HYENAIEYDCKE--EHAEFVLVRKDMLFNQLIEMALLSLGYSHS 123
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI 108
+ AKG + + W P+ +S +++ P TV D+L ++ V TL+I++
Sbjct: 124 SAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQL 170
>UNIPROTKB|A7MB41 [details] [associations]
symbol:SATB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060004 "reflex" evidence=IEA] [GO:0050798 "activated T
cell proliferation" evidence=IEA] [GO:0043374 "CD8-positive,
alpha-beta T cell differentiation" evidence=IEA] [GO:0043367
"CD4-positive, alpha-beta T cell differentiation" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0016571 "histone
methylation" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0008544 "epidermis development" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005720
"nuclear heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0016605 GO:GO:0043565 GO:GO:0005720
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0000122 GO:GO:0016363 GO:GO:0008544
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0050798 GO:GO:0016571
GO:GO:0043374 GO:GO:0043367 CTD:6304 eggNOG:NOG313826
HOGENOM:HOG000004805 HOVERGEN:HBG054240 OMA:HLMKTNL GO:GO:0060004
GeneTree:ENSGT00390000008096 EMBL:DAAA02003773 EMBL:DAAA02003774
EMBL:DAAA02003775 EMBL:BC151323 IPI:IPI00908049
RefSeq:NP_001095510.1 UniGene:Bt.44470 SMR:A7MB41 STRING:A7MB41
Ensembl:ENSBTAT00000028199 GeneID:516952 KEGG:bta:516952
NextBio:20872343 Uniprot:A7MB41
Length = 760
Score = 145 (56.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 35/107 (32%), Positives = 57/107 (53%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G LPV CVVE H+ + + K E +V+ + F L+ +AL LGYS
Sbjct: 71 GTMLPVFCVVE-----HYENAIEYDCKE--EHAEFVLVRKDMLFNQLIEMALLSLGYSHS 123
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI 108
+ AKG + + W P+ +S +++ P TV D+L ++ V TL+I++
Sbjct: 124 SAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQL 170
>UNIPROTKB|Q01826 [details] [associations]
symbol:SATB1 "DNA-binding protein SATB1" species:9606 "Homo
sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0008544 "epidermis
development" evidence=IEA] [GO:0016571 "histone methylation"
evidence=IEA] [GO:0043367 "CD4-positive, alpha-beta T cell
differentiation" evidence=IEA] [GO:0043374 "CD8-positive,
alpha-beta T cell differentiation" evidence=IEA] [GO:0050798
"activated T cell proliferation" evidence=IEA] [GO:0060004 "reflex"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0016605 "PML body" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=TAS] [GO:0006325 "chromatin organization" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006921 "cellular component disassembly involved in execution
phase of apoptosis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_578 InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0019048 EMBL:CH471055
GO:GO:0016605 GO:GO:0043565 GO:GO:0005720
Pathway_Interaction_DB:caspase_pathway GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0000122 GO:GO:0003690 GO:GO:0006921 GO:GO:0016363
GO:GO:0008544 GO:GO:0006325 Gene3D:1.10.260.40 SUPFAM:SSF47413
GO:GO:0050798 GO:GO:0016571 GO:GO:0043374 GO:GO:0043367 EMBL:M97287
EMBL:AK127242 EMBL:AB209761 EMBL:AC139618 EMBL:AC144521
EMBL:BC001744 IPI:IPI00009804 IPI:IPI00555719 PIR:A43314
RefSeq:NP_001124482.1 RefSeq:NP_001182399.1 RefSeq:NP_002962.1
UniGene:Hs.517717 PDB:1YSE PDB:2L1P PDB:2O49 PDB:2O4A PDB:3NZL
PDB:3TUO PDBsum:1YSE PDBsum:2L1P PDBsum:2O49 PDBsum:2O4A
PDBsum:3NZL PDBsum:3TUO ProteinModelPortal:Q01826 SMR:Q01826
DIP:DIP-48757N IntAct:Q01826 MINT:MINT-1478608 STRING:Q01826
PhosphoSite:Q01826 DMDM:417747 PaxDb:Q01826 PRIDE:Q01826 DNASU:6304
Ensembl:ENST00000338745 Ensembl:ENST00000417717
Ensembl:ENST00000454909 GeneID:6304 KEGG:hsa:6304 UCSC:uc003cbh.3
UCSC:uc003cbi.3 CTD:6304 GeneCards:GC03M018364 HGNC:HGNC:10541
HPA:CAB023814 MIM:602075 neXtProt:NX_Q01826 PharmGKB:PA34951
eggNOG:NOG313826 HOGENOM:HOG000004805 HOVERGEN:HBG054240
OMA:HLMKTNL OrthoDB:EOG4BVRT9 PhylomeDB:Q01826 ChiTaRS:SATB1
EvolutionaryTrace:Q01826 GenomeRNAi:6304 NextBio:24475
PMAP-CutDB:Q01826 ArrayExpress:Q01826 Bgee:Q01826 CleanEx:HS_SATB1
Genevestigator:Q01826 GermOnline:ENSG00000182568 GO:GO:0060004
Uniprot:Q01826
Length = 763
Score = 145 (56.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 35/107 (32%), Positives = 57/107 (53%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G LPV CVVE H+ + + K E +V+ + F L+ +AL LGYS
Sbjct: 71 GTMLPVFCVVE-----HYENAIEYDCKE--EHAEFVLVRKDMLFNQLIEMALLSLGYSHS 123
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI 108
+ AKG + + W P+ +S +++ P TV D+L ++ V TL+I++
Sbjct: 124 SAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQL 170
>MGI|MGI:105084 [details] [associations]
symbol:Satb1 "special AT-rich sequence binding protein 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0000785 "chromatin" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005720 "nuclear heterochromatin" evidence=IDA] [GO:0006325
"chromatin organization" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0008544 "epidermis
development" evidence=IMP] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016571 "histone methylation" evidence=IDA] [GO:0016605 "PML
body" evidence=ISO] [GO:0042110 "T cell activation" evidence=IMP]
[GO:0043367 "CD4-positive, alpha-beta T cell differentiation"
evidence=IMP] [GO:0043374 "CD8-positive, alpha-beta T cell
differentiation" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0050798 "activated T cell proliferation"
evidence=IMP] [GO:0060004 "reflex" evidence=IMP] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 MGI:MGI:105084 GO:GO:0003677
GO:GO:0016605 GO:GO:0043565 GO:GO:0005720 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0000122 GO:GO:0016363 GO:GO:0008544
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0050798 EMBL:CH466559
GO:GO:0016571 GO:GO:0043374 GO:GO:0043367 CTD:6304 eggNOG:NOG313826
HOGENOM:HOG000004805 HOVERGEN:HBG054240 ChiTaRS:SATB1 GO:GO:0060004
EMBL:U05252 EMBL:AK088563 EMBL:AK158518 EMBL:CT010371 EMBL:BC011132
IPI:IPI00119007 PIR:A56208 RefSeq:NP_001157102.1
RefSeq:NP_001157103.1 RefSeq:NP_001157104.1 RefSeq:NP_033148.2
UniGene:Mm.311655 ProteinModelPortal:Q60611 SMR:Q60611
STRING:Q60611 PhosphoSite:Q60611 PaxDb:Q60611 PRIDE:Q60611
Ensembl:ENSMUST00000133574 Ensembl:ENSMUST00000144331
Ensembl:ENSMUST00000152830 Ensembl:ENSMUST00000169480
Ensembl:ENSMUST00000176669 GeneID:20230 KEGG:mmu:20230
GeneTree:ENSGT00390000008096 InParanoid:Q91XB1 NextBio:297861
Bgee:Q60611 CleanEx:MM_SATB1 Genevestigator:Q60611
GermOnline:ENSMUSG00000023927 Uniprot:Q60611
Length = 764
Score = 145 (56.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 35/107 (32%), Positives = 57/107 (53%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G LPV CVVE H+ + + K E +V+ + F L+ +AL LGYS
Sbjct: 71 GTMLPVFCVVE-----HYENAIEYDCKE--EHAEFVLVRKDMLFNQLIEMALLSLGYSHS 123
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI 108
+ AKG + + W P+ +S +++ P TV D+L ++ V TL+I++
Sbjct: 124 SAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQL 170
>RGD|1305561 [details] [associations]
symbol:Satb1 "SATB homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0000785 "chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005720
"nuclear heterochromatin" evidence=IEA;ISO] [GO:0006325 "chromatin
organization" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0008544 "epidermis development"
evidence=IEA;ISO] [GO:0016363 "nuclear matrix" evidence=IEA;ISO]
[GO:0016571 "histone methylation" evidence=IEA;ISO] [GO:0016605
"PML body" evidence=IEA;ISO] [GO:0042110 "T cell activation"
evidence=ISO] [GO:0043367 "CD4-positive, alpha-beta T cell
differentiation" evidence=IEA;ISO] [GO:0043374 "CD8-positive,
alpha-beta T cell differentiation" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0050798
"activated T cell proliferation" evidence=IEA;ISO] [GO:0060004
"reflex" evidence=IEA;ISO] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 RGD:1305561
GO:GO:0016605 GO:GO:0043565 GO:GO:0005720 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0000122 GO:GO:0016363 GO:GO:0008544 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0050798 GO:GO:0016571 GO:GO:0043374
GO:GO:0043367 CTD:6304 eggNOG:NOG313826 HOGENOM:HOG000004805
HOVERGEN:HBG054240 OMA:HLMKTNL OrthoDB:EOG4BVRT9 GO:GO:0060004
GeneTree:ENSGT00390000008096 EMBL:BC085814 EMBL:CH474081
IPI:IPI00371558 RefSeq:NP_001012129.1 UniGene:Rn.21462 SMR:Q5U2Y2
STRING:Q5U2Y2 Ensembl:ENSRNOT00000017556 GeneID:316164
KEGG:rno:316164 UCSC:RGD:1305561 InParanoid:Q5U2Y2 NextBio:670507
Genevestigator:Q5U2Y2 Uniprot:Q5U2Y2
Length = 764
Score = 145 (56.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 35/107 (32%), Positives = 57/107 (53%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G LPV CVVE H+ + + K E +V+ + F L+ +AL LGYS
Sbjct: 71 GTMLPVFCVVE-----HYENAIEYDCKE--EHAEFVLVRKDMLFNQLIEMALLSLGYSHS 123
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI 108
+ AKG + + W P+ +S +++ P TV D+L ++ V TL+I++
Sbjct: 124 SAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQL 170
>ZFIN|ZDB-GENE-031010-36 [details] [associations]
symbol:satb1a "SATB homeobox 1a" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003350
InterPro:IPR010982 Pfam:PF02376 PROSITE:PS51042
ZFIN:ZDB-GENE-031010-36 GO:GO:0003677 Gene3D:1.10.260.40
SUPFAM:SSF47413 eggNOG:NOG313826 HOGENOM:HOG000004805
HOVERGEN:HBG054240 OrthoDB:EOG4BVRT9 GeneTree:ENSGT00390000008096
EMBL:BX927400 EMBL:BC163787 EMBL:BC163793 IPI:IPI00637065
RefSeq:NP_001073631.1 UniGene:Dr.88067 SMR:Q1LUN2
Ensembl:ENSDART00000056205 GeneID:378993 KEGG:dre:378993 CTD:378993
OMA:ASDEINI NextBio:20813925 Uniprot:Q1LUN2
Length = 728
Score = 136 (52.9 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 45/148 (30%), Positives = 67/148 (45%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G LPV C+VE S K S A +V+ + F + ALQ LGY+
Sbjct: 55 GSLLPVFCMVEQ--SDVPPSEGKRSEHA-----EFVLLKKDLLFSQITEAALQELGYTHT 107
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKIFRTRPC--ILAEM 119
A G + + +W P+++S +++ TVGD+L +L V TLRIK+ + AE
Sbjct: 108 AAALATGQIQVGHWNPVALSSVTDVSDATVGDMLQDLYHVITLRIKLHSVSKLEDLPAEQ 167
Query: 120 KD-----KLLRLLLVQSQTQIIASGCPL 142
L+ LL + +A CPL
Sbjct: 168 WTHSTVRNALKDLLKEMNQSTLAKECPL 195
>UNIPROTKB|H0YL78 [details] [associations]
symbol:SATB1 "DNA-binding protein SATB1" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008544 "epidermis development" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0016571 "histone methylation"
evidence=IEA] [GO:0043367 "CD4-positive, alpha-beta T cell
differentiation" evidence=IEA] [GO:0043374 "CD8-positive,
alpha-beta T cell differentiation" evidence=IEA] [GO:0050798
"activated T cell proliferation" evidence=IEA] [GO:0060004 "reflex"
evidence=IEA] GO:GO:0003677 GO:GO:0005720 GO:GO:0003700
GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0016363
GO:GO:0008544 GO:GO:0050798 GO:GO:0016571 GO:GO:0043374
GO:GO:0043367 EMBL:AC139618 EMBL:AC144521 HGNC:HGNC:10541
ChiTaRS:SATB1 GO:GO:0060004 ProteinModelPortal:H0YL78 SMR:H0YL78
Ensembl:ENST00000491519 Bgee:H0YL78 Uniprot:H0YL78
Length = 108
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 45 FQDLVPVALQRLGYSKENFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATL 104
F L+ +AL LGYS + AKG + + W P+ +S +++ P TV D+L ++ V TL
Sbjct: 3 FNQLIEMALLSLGYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTL 62
Query: 105 RIKI 108
+I++
Sbjct: 63 KIQL 66
>UNIPROTKB|H0YNA6 [details] [associations]
symbol:SATB1 "DNA-binding protein SATB1" species:9606 "Homo
sapiens" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008544 "epidermis development" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0016571 "histone methylation"
evidence=IEA] [GO:0043367 "CD4-positive, alpha-beta T cell
differentiation" evidence=IEA] [GO:0043374 "CD8-positive,
alpha-beta T cell differentiation" evidence=IEA] [GO:0050798
"activated T cell proliferation" evidence=IEA] [GO:0060004 "reflex"
evidence=IEA] GO:GO:0003677 GO:GO:0005720 GO:GO:0003700
GO:GO:0003682 GO:GO:0006338 GO:GO:0000122 GO:GO:0016363
GO:GO:0008544 GO:GO:0050798 GO:GO:0016571 GO:GO:0043374
GO:GO:0043367 EMBL:AC139618 EMBL:AC144521 HGNC:HGNC:10541
ChiTaRS:SATB1 GO:GO:0060004 Ensembl:ENST00000475083 Bgee:H0YNA6
Uniprot:H0YNA6
Length = 134
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 45 FQDLVPVALQRLGYSKENFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATL 104
F L+ +AL LGYS + AKG + + W P+ +S +++ P TV D+L ++ V TL
Sbjct: 3 FNQLIEMALLSLGYSHSSAAQAKGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTL 62
Query: 105 RIKI 108
+I++
Sbjct: 63 KIQL 66
>UNIPROTKB|J9NRQ8 [details] [associations]
symbol:SATB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00390000008096
CTD:23314 EMBL:AAEX03017991 RefSeq:XP_003434297.1
Ensembl:ENSCAFT00000046713 GeneID:100687238 KEGG:cfa:100687238
Uniprot:J9NRQ8
Length = 733
Score = 134 (52.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G +PV CVVE + + ++R+ E +V+ + F LV AL LGYS
Sbjct: 57 GLMIPVFCVVEQLDGSLEY----DNREEHAE---FVLVRKDVLFSQLVETALLALGYSHS 109
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI-----FRTRPCIL 116
+ A+G + + W P+ +S +++ P TV D+L ++ V TL+I++ P
Sbjct: 110 SAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQ 169
Query: 117 ---AEMKDKLLRLLLVQSQTQIIASGCPL 142
A +++ L LL +Q+ + A CPL
Sbjct: 170 WNHATVRNALKELLKEMNQSTL-AKECPL 197
>UNIPROTKB|Q9UPW6 [details] [associations]
symbol:SATB2 "DNA-binding protein SATB2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002076
"osteoblast development" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0009880 "embryonic pattern specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0060021 "palate development"
evidence=IEA] [GO:0071310 "cellular response to organic substance"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001356 InterPro:IPR003350 InterPro:IPR009057
InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0001764 EMBL:CH471063 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0006338
GO:GO:0000122 GO:GO:0002076 GO:GO:0051216 GO:GO:0016363
GO:GO:0048704 GO:GO:0060021 GO:GO:0009880 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0071310 GO:GO:0000118 Orphanet:199306
eggNOG:NOG313826 HOVERGEN:HBG054240 EMBL:AB028957 EMBL:AK291463
EMBL:AC016746 EMBL:AC017096 EMBL:BC098136 EMBL:BC099723
EMBL:BC103500 IPI:IPI00010433 RefSeq:NP_001165980.1
RefSeq:NP_001165988.1 RefSeq:NP_056080.1 UniGene:Hs.516617 PDB:1WI3
PDB:1WIZ PDB:2CSF PDBsum:1WI3 PDBsum:1WIZ PDBsum:2CSF
ProteinModelPortal:Q9UPW6 SMR:Q9UPW6 STRING:Q9UPW6
PhosphoSite:Q9UPW6 DMDM:13634020 PaxDb:Q9UPW6 PRIDE:Q9UPW6
DNASU:23314 Ensembl:ENST00000260926 Ensembl:ENST00000417098
Ensembl:ENST00000457245 GeneID:23314 KEGG:hsa:23314 UCSC:uc002uuy.2
CTD:23314 GeneCards:GC02M200098 HGNC:HGNC:21637 HPA:CAB023669
HPA:HPA001042 HPA:HPA029543 MIM:119540 MIM:608148
neXtProt:NX_Q9UPW6 Orphanet:251019 Orphanet:251028
PharmGKB:PA128394624 InParanoid:Q9UPW6 OMA:PPAEDSC
OrthoDB:EOG4DBTD9 PhylomeDB:Q9UPW6 ChiTaRS:SATB2
EvolutionaryTrace:Q9UPW6 GenomeRNAi:23314 NextBio:45192
ArrayExpress:Q9UPW6 Bgee:Q9UPW6 CleanEx:HS_SATB2
Genevestigator:Q9UPW6 GermOnline:ENSG00000119042 Uniprot:Q9UPW6
Length = 733
Score = 134 (52.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G +PV CVVE + + ++R+ E +V+ + F LV AL LGYS
Sbjct: 57 GLMIPVFCVVEQLDGSLEY----DNREEHAE---FVLVRKDVLFSQLVETALLALGYSHS 109
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI-----FRTRPCIL 116
+ A+G + + W P+ +S +++ P TV D+L ++ V TL+I++ P
Sbjct: 110 SAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQ 169
Query: 117 ---AEMKDKLLRLLLVQSQTQIIASGCPL 142
A +++ L LL +Q+ + A CPL
Sbjct: 170 WNHATVRNALKELLKEMNQSTL-AKECPL 197
>MGI|MGI:2679336 [details] [associations]
symbol:Satb2 "special AT-rich sequence binding protein 2"
species:10090 "Mus musculus" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0002076 "osteoblast development"
evidence=IGI;IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IGI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IMP] [GO:0051216
"cartilage development" evidence=IMP] [GO:0060021 "palate
development" evidence=IMP] [GO:0071310 "cellular response to
organic substance" evidence=IDA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 MGI:MGI:2679336 GO:GO:0005737
GO:GO:0001764 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0006338 GO:GO:0000122 GO:GO:0000790
GO:GO:0002076 GO:GO:0051216 GO:GO:0016363 GO:GO:0048704
GO:GO:0060021 GO:GO:0009880 Gene3D:1.10.260.40 SUPFAM:SSF47413
GO:GO:0071310 GO:GO:0000118 eggNOG:NOG313826 HOGENOM:HOG000004805
HOVERGEN:HBG054240 GeneTree:ENSGT00390000008096 CTD:23314
OMA:PPAEDSC OrthoDB:EOG4DBTD9 EMBL:AF319623 EMBL:AK129270
IPI:IPI00128650 IPI:IPI00395054 RefSeq:NP_631885.1
UniGene:Mm.145599 ProteinModelPortal:Q8VI24 SMR:Q8VI24
IntAct:Q8VI24 STRING:Q8VI24 PhosphoSite:Q8VI24 PRIDE:Q8VI24
Ensembl:ENSMUST00000042857 Ensembl:ENSMUST00000114415 GeneID:212712
KEGG:mmu:212712 UCSC:uc011wlc.1 InParanoid:Q8VI24 NextBio:373676
Bgee:Q8VI24 CleanEx:MM_SATB2 Genevestigator:Q8VI24
GermOnline:ENSMUSG00000038331 Uniprot:Q8VI24
Length = 733
Score = 134 (52.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G +PV CVVE + + ++R+ E +V+ + F LV AL LGYS
Sbjct: 57 GLMIPVFCVVEQLDGSLEY----DNREEHAE---FVLVRKDVLFSQLVETALLALGYSHS 109
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI-----FRTRPCIL 116
+ A+G + + W P+ +S +++ P TV D+L ++ V TL+I++ P
Sbjct: 110 SAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQ 169
Query: 117 ---AEMKDKLLRLLLVQSQTQIIASGCPL 142
A +++ L LL +Q+ + A CPL
Sbjct: 170 WNHATVRNALKELLKEMNQSTL-AKECPL 197
>RGD|1562369 [details] [associations]
symbol:Satb2 "SATB homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000118 "histone deacetylase complex" evidence=IEA;ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0001764 "neuron
migration" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006338 "chromatin remodeling"
evidence=IEA;ISO] [GO:0009880 "embryonic pattern specification"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=IEA;ISO] [GO:0060021
"palate development" evidence=IEA;ISO] [GO:0071310 "cellular
response to organic substance" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 RGD:1562369
GO:GO:0005737 GO:GO:0001764 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0006338 GO:GO:0000122 GO:GO:0002076
GO:GO:0051216 GO:GO:0048704 GO:GO:0060021 GO:GO:0009880
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0071310 EMBL:CH473965
GO:GO:0000118 GeneTree:ENSGT00390000008096 CTD:23314 OMA:PPAEDSC
OrthoDB:EOG4DBTD9 IPI:IPI00568480 RefSeq:NP_001102776.1
UniGene:Rn.216103 Ensembl:ENSRNOT00000049259 GeneID:501145
KEGG:rno:501145 UCSC:RGD:1562369 NextBio:708423 Uniprot:D3ZJ19
Length = 733
Score = 134 (52.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G +PV CVVE + + ++R+ E +V+ + F LV AL LGYS
Sbjct: 57 GLMIPVFCVVEQLDGSLEY----DNREEHAE---FVLVRKDVLFSQLVETALLALGYSHS 109
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI-----FRTRPCIL 116
+ A+G + + W P+ +S +++ P TV D+L ++ V TL+I++ P
Sbjct: 110 SAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQ 169
Query: 117 ---AEMKDKLLRLLLVQSQTQIIASGCPL 142
A +++ L LL +Q+ + A CPL
Sbjct: 170 WNHATVRNALKELLKEMNQSTL-AKECPL 197
>UNIPROTKB|F1RS63 [details] [associations]
symbol:SATB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060004 "reflex" evidence=IEA] [GO:0050798 "activated T
cell proliferation" evidence=IEA] [GO:0043374 "CD8-positive,
alpha-beta T cell differentiation" evidence=IEA] [GO:0043367
"CD4-positive, alpha-beta T cell differentiation" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0016571 "histone
methylation" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0008544 "epidermis development" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005720
"nuclear heterochromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0016605 GO:GO:0043565 GO:GO:0005720
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0000122 GO:GO:0016363 GO:GO:0008544
Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0050798 GO:GO:0016571
GO:GO:0043374 GO:GO:0043367 OMA:HLMKTNL GO:GO:0060004
GeneTree:ENSGT00390000008096 EMBL:AEMK01195570 EMBL:CU582860
EMBL:CU861602 Ensembl:ENSSSCT00000012267 Uniprot:F1RS63
Length = 762
Score = 134 (52.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 35/109 (32%), Positives = 57/109 (52%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G LPV CVVE H+ + + K E +V+ + F L+ +AL LGYS
Sbjct: 71 GTMLPVFCVVE-----HYENAIEYDCKE--EHAEFVLVRKDMLFNQLIEMALLSLGYSHS 123
Query: 62 NFYSAKGY--VGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI 108
+ AKG + + W P+ +S +++ P TV D+L ++ V TL+I++
Sbjct: 124 SAAQAKGIGLIQVGKWNPVPLSYVTDAPDATVADMLQDVYHVVTLKIQL 172
>UNIPROTKB|F1Q2V6 [details] [associations]
symbol:SATB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:1.10.260.40 SUPFAM:SSF47413 GeneTree:ENSGT00390000008096
OMA:PPAEDSC EMBL:AAEX03017991 Ensembl:ENSCAFT00000017482
Uniprot:F1Q2V6
Length = 763
Score = 134 (52.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G +PV CVVE + + ++R+ E +V+ + F LV AL LGYS
Sbjct: 87 GLMIPVFCVVEQLDGSLEY----DNREEHAE---FVLVRKDVLFSQLVETALLALGYSHS 139
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI-----FRTRPCIL 116
+ A+G + + W P+ +S +++ P TV D+L ++ V TL+I++ P
Sbjct: 140 SAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQ 199
Query: 117 ---AEMKDKLLRLLLVQSQTQIIASGCPL 142
A +++ L LL +Q+ + A CPL
Sbjct: 200 WNHATVRNALKELLKEMNQSTL-AKECPL 227
>UNIPROTKB|F1N426 [details] [associations]
symbol:SATB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071310 "cellular response to organic substance"
evidence=IEA] [GO:0060021 "palate development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0005737 GO:GO:0001764 GO:GO:0043565
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0006338 GO:GO:0000122
GO:GO:0002076 GO:GO:0051216 GO:GO:0048704 GO:GO:0060021
GO:GO:0009880 Gene3D:1.10.260.40 SUPFAM:SSF47413 GO:GO:0071310
GO:GO:0000118 GeneTree:ENSGT00390000008096 OMA:PPAEDSC
EMBL:DAAA02005537 EMBL:DAAA02005538 EMBL:DAAA02005539
EMBL:DAAA02005540 EMBL:DAAA02005541 EMBL:DAAA02005542
EMBL:DAAA02005543 EMBL:DAAA02005544 EMBL:DAAA02005545
EMBL:DAAA02005546 EMBL:DAAA02005547 EMBL:DAAA02005548
EMBL:DAAA02005549 EMBL:DAAA02005550 EMBL:DAAA02005551
EMBL:DAAA02005552 EMBL:DAAA02005553 EMBL:DAAA02005554
EMBL:DAAA02005555 IPI:IPI00703652 Ensembl:ENSBTAT00000021729
Uniprot:F1N426
Length = 765
Score = 134 (52.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G +PV CVVE + + ++R+ E +V+ + F LV AL LGYS
Sbjct: 89 GLMIPVFCVVEQLDGSLEY----DNREEHAE---FVLVRKDVLFSQLVETALLALGYSHS 141
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI-----FRTRPCIL 116
+ A+G + + W P+ +S +++ P TV D+L ++ V TL+I++ P
Sbjct: 142 SAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQ 201
Query: 117 ---AEMKDKLLRLLLVQSQTQIIASGCPL 142
A +++ L LL +Q+ + A CPL
Sbjct: 202 WNHATVRNALKELLKEMNQSTL-AKECPL 229
>UNIPROTKB|E1BZL3 [details] [associations]
symbol:SATB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0000118 "histone deacetylase
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002076
"osteoblast development" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0009880 "embryonic pattern
specification" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0071310 "cellular response
to organic substance" evidence=IEA] InterPro:IPR001356
InterPro:IPR003350 InterPro:IPR009057 InterPro:IPR010982
Pfam:PF00046 Pfam:PF02376 PROSITE:PS50071 PROSITE:PS51042
SMART:SM00389 GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0006338 GO:GO:0000122 Gene3D:1.10.260.40
SUPFAM:SSF47413 GO:GO:0071310 GO:GO:0000118
GeneTree:ENSGT00390000008096 CTD:23314 OMA:PPAEDSC
EMBL:AADN02019848 EMBL:AADN02019849 EMBL:AADN02019850
IPI:IPI00594238 RefSeq:NP_001186039.1 UniGene:Gga.32259
Ensembl:ENSGALT00000013201 GeneID:424063 KEGG:gga:424063
NextBio:20826445 Uniprot:E1BZL3
Length = 731
Score = 132 (51.5 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G +PV CVVE + + ++R+ E +V+ + F LV AL LGYS
Sbjct: 57 GLMIPVFCVVEQSDASLEY----DNREEHAE---FVLVRKDVLFSQLVETALLALGYSHS 109
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI-----FRTRPCIL 116
+ A+G + + W P+ +S +++ P TV D+L ++ V TL+I++ P
Sbjct: 110 SAAQAQGIIKLGRWNPLPLSYVTDAPDATVADMLQDVYHVVTLKIQLQSCSKLEDLPAEQ 169
Query: 117 ---AEMKDKLLRLLLVQSQTQIIASGCPL 142
A +++ L LL +Q+ + A CPL
Sbjct: 170 WNHATVRNALKELLKEMNQSTL-AKECPL 197
>ZFIN|ZDB-GENE-070912-212 [details] [associations]
symbol:satb2 "SATB homeobox 2" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0055113 "epiboly involved in gastrulation with mouth forming
second" evidence=IMP] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 Pfam:PF00046 Pfam:PF02376
PROSITE:PS50071 PROSITE:PS51042 SMART:SM00389
ZFIN:ZDB-GENE-070912-212 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0055113 Gene3D:1.10.260.40
SUPFAM:SSF47413 EMBL:HM776639 IPI:IPI00971367 UniGene:Dr.116489
Uniprot:E1ANH4
Length = 863
Score = 131 (51.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 44/148 (29%), Positives = 69/148 (46%)
Query: 2 GKSLPVHCVVEAVYSVHHWKSAKNSRKAILETDTYVITPTNTNFQDLVPVALQRLGYSKE 61
G +PV CVVE + S SR+ E +V+ + F LV AL LGYS
Sbjct: 58 GLMIPVFCVVEQMDG--GMISDGESREEHAE---FVLVRKDILFTQLVETALLALGYSHS 112
Query: 62 NFYSAKGYVGIKNWKPISISKISENPATTVGDILGELTTVATLRIKI--FRTRPCILAEM 119
+ A G + + W P+ I +++ P TV D+L ++ + TLRI++ F + +E
Sbjct: 113 SAAQAHGIIKVGRWNPLPIHYLTDAPEATVADMLLDVYHMVTLRIQLQSFAKLEDLPSEQ 172
Query: 120 KD-----KLLRLLLVQSQTQIIASGCPL 142
+ L+ LL + +A CPL
Sbjct: 173 WNHATVRNALKELLKEMNQSTLAKECPL 200
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 143 143 0.00091 102 3 11 22 0.45 31
30 0.48 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 592 (63 KB)
Total size of DFA: 134 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.04u 0.09s 14.13t Elapsed: 00:00:08
Total cpu time: 14.05u 0.09s 14.14t Elapsed: 00:00:08
Start: Thu Aug 15 11:36:05 2013 End: Thu Aug 15 11:36:13 2013