BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1758
(1527 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340788622|ref|YP_004754087.1| GTP-binding protein TypA [Collimonas fungivorans Ter331]
gi|340553889|gb|AEK63264.1| GTP-binding protein TypA/BipA [Collimonas fungivorans Ter331]
Length = 611
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/596 (74%), Positives = 521/596 (87%), Gaps = 1/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ+++AR+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 12 AIIAHVDHGKTTLVDQLLRQSGTFRDNQHVDARVMDSNDIEKERGITILSKNCAVEYKGT 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 72 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVVN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR NA P+ V+ATF+LFDKL AT+EQLDFP+IY S GYA R GNM PLF+
Sbjct: 132 KIDRENADPQKAVNATFELFDKLGATDEQLDFPIIYASGFKGYAGLEDTVRDGNMEPLFD 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILK+VP +D+ N PLQLQI SLEYSSY+GKIG+GRIL G++K+LQDVV MNGPDDKP
Sbjct: 192 AILKHVPAREDDPNGPLQLQITSLEYSSYVGKIGVGRILRGKVKALQDVVWMNGPDDKPT 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+INQ+ F+GLDRVL +EAL+GDIVLI GIEEI IGSTIC P P GLPML +DEPTL
Sbjct: 252 KARINQVLTFRGLDRVLADEALAGDIVLINGIEEISIGSTICAPDHPEGLPMLKVDEPTL 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVNNSPLAGREGKF+TTRQIK+RLD E+K N+ LRV Q + DDS YEVSGRGELHL
Sbjct: 312 TMNFMVNNSPLAGREGKFVTTRQIKDRLDRELKANMALRVVQAEGDDSTYEVSGRGELHL 371
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYEL+VSRPRV+FK ++G EPYENL VD+EE NQG +M++L R GDL
Sbjct: 372 TILIENMRREGYELAVSRPRVVFKMVDGVRQEPYENLTVDVEEANQGGVMEELGRRRGDL 431
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + K RVRLEYRIP+RGLIGFQ EF+TLTRGTGL+SHVF+EYAP + SK +LG R
Sbjct: 432 QNMEPDGKGRVRLEYRIPARGLIGFQGEFMTLTRGTGLMSHVFDEYAPV-DTSKGELGGR 490
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY++WKLQDRGR+F++HND VYEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 491 RNGVLISQDDGAAVAYAIWKLQDRGRMFVSHNDPVYEGMIIGIHSRDNDLVVNPIKGKQL 550
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L+ PI+++LEYA+EFI+DDELVE+TPK+IRLRKR+LKE+ERKK
Sbjct: 551 TNVRSSGTDEAVRLVPPIEMSLEYAVEFIDDDELVEVTPKSIRLRKRYLKEHERKK 606
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDQLLRQSGTFRDNQHVDARVMDSNDIEKERGITILSKNCAVEYKG 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 71 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVV 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|152980795|ref|YP_001354182.1| GTP-binding elongation factor [Janthinobacterium sp. Marseille]
gi|151280872|gb|ABR89282.1| GTP-binding elongation factor [Janthinobacterium sp. Marseille]
Length = 612
Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/596 (74%), Positives = 526/596 (88%), Gaps = 1/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++AR+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 12 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVDARVMDSNDIEKERGITILSKNCAVEYKGT 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 72 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVVN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR NA P+ V+ATF+LFDKL AT+EQLDFP++Y S GYA R GNM PLF+
Sbjct: 132 KIDRENADPQKAVNATFELFDKLGATDEQLDFPIVYASGFKGYAGLEDTVRDGNMEPLFD 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP +D+ + PLQLQI SLEYSSY+GKIG+GRIL+GR+K+LQDVV MNGP+DKP
Sbjct: 192 AILEHVPAREDDPDAPLQLQITSLEYSSYVGKIGVGRILAGRVKALQDVVWMNGPEDKPT 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+INQ+ FKGLDRVLV+EAL+GDIVLI GIEEI IGSTIC PNGLPML +DEPTL
Sbjct: 252 KARINQVLTFKGLDRVLVDEALAGDIVLINGIEEISIGSTICAVDAPNGLPMLKVDEPTL 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN+SPLAGREGKF+TTRQI++RL+ E+K N+ LRV Q++ DDS YEVSGRGELHL
Sbjct: 312 TMNFMVNSSPLAGREGKFVTTRQIRDRLEKELKANMALRVVQSEDDDSTYEVSGRGELHL 371
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREG+E++VSRPRV+FK ++G +EPYENL VD+EE+NQG +M++L R GDL
Sbjct: 372 TILIENMRREGFEMAVSRPRVVFKMVDGVRHEPYENLTVDVEEVNQGGVMEELGRRRGDL 431
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + K RVRLEYRIP+RGLIGFQ EF+TLTRGTGL+SHVF+EYAP N +K DLG R
Sbjct: 432 QNMEPDGKGRVRLEYRIPARGLIGFQGEFMTLTRGTGLMSHVFDEYAPVDN-TKGDLGGR 490
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY++WKLQDRGR+F++HND VYEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 491 RNGVLISQDDGAAVAYAIWKLQDRGRMFVSHNDPVYEGMIIGIHSRDNDLVVNPIKGKQL 550
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L+ PI+++LEYA+EFI+DDELVE+TPK+IRLRKRFLKE+ERKK
Sbjct: 551 TNVRSSGTDEAVRLVPPIEMSLEYAVEFIDDDELVEVTPKSIRLRKRFLKEHERKK 606
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVDARVMDSNDIEKERGITILSKNCAVEYKG 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 71 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVV 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|134095607|ref|YP_001100682.1| GTP-binding elongation factor family protein [Herminiimonas
arsenicoxydans]
gi|133739510|emb|CAL62561.1| GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A)
[Herminiimonas arsenicoxydans]
Length = 612
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/596 (73%), Positives = 526/596 (88%), Gaps = 1/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ I+AR+MDS +IEKERGITI SKNC++EY GT
Sbjct: 12 AIIAHVDHGKTTLVDQLLRQSGTFRDNQQIDARVMDSGDIEKERGITILSKNCAVEYKGT 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 72 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVLN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR EW ++ATF+LFDKL ATEEQLDFP++Y S L+GYA R GNM PLF+
Sbjct: 132 KIDRPGARAEWAINATFELFDKLGATEEQLDFPIVYASGLNGYAGLTPDVRGGNMEPLFD 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP +D+ + PLQLQI SLEYSSY+GKIG+GRIL+GR+K+LQDVV MNGPDDKP
Sbjct: 192 AILEHVPARQDDPDAPLQLQITSLEYSSYVGKIGVGRILAGRVKALQDVVWMNGPDDKPT 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+INQ+ FKGLDRVLV+EAL+GDIVLI GIEEI IG+TIC P PNGLPML +DEPTL
Sbjct: 252 KARINQVLTFKGLDRVLVDEALAGDIVLINGIEEIGIGTTICAPDHPNGLPMLKVDEPTL 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVNNSPLAGREGKF+TTRQI++RL+ E+K N+ LRV Q+++DDS YEVSGRGELHL
Sbjct: 312 TMNFMVNNSPLAGREGKFVTTRQIRDRLERELKANMALRVVQSENDDSTYEVSGRGELHL 371
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREG+EL+VSRPRV+FK ++G +EP+ENL +D+EE NQG +M++L R GDL
Sbjct: 372 TILIENMRREGFELAVSRPRVVFKMVDGVRHEPFENLTIDVEETNQGGVMEELGRRRGDL 431
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + K RVRLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF++YAP + SK +LG R
Sbjct: 432 QNMEPDGKGRVRLEYHIPARGLIGFQGEFMTLTRGTGLMSHVFDDYAPV-DVSKGELGGR 490
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY++WKLQDRGR+F++HND VYEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 491 RNGVLISQDDGAAVAYAIWKLQDRGRMFVSHNDPVYEGMIIGIHSRDNDLVVNPIKGKQL 550
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L+ PI+++LEYA+EFI+DDELVE+TPK+IRLRKR+LKE+ERKK
Sbjct: 551 TNVRSSGTDEAVRLVPPIEMSLEYAVEFIDDDELVEVTPKSIRLRKRYLKEHERKK 606
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + I + + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDQLLRQSGTFRDNQQIDARVMDSGDIEKERGITILSKNCAVEYKG 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 71 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVL 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|399017457|ref|ZP_10719649.1| GTP-binding protein TypA/BipA [Herbaspirillum sp. CF444]
gi|398103331|gb|EJL93502.1| GTP-binding protein TypA/BipA [Herbaspirillum sp. CF444]
Length = 625
Score = 946 bits (2446), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/596 (73%), Positives = 522/596 (87%), Gaps = 1/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++AR+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 26 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVDARVMDSNDIEKERGITILSKNCAVEYKGT 85
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 86 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVVN 145
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR NA P+ V+ATF+LFDKL AT+EQLDFP++Y S GYA R GNM PLF+
Sbjct: 146 KIDRENADPQKAVNATFELFDKLGATDEQLDFPIVYASGFKGYAGLEDTVRDGNMEPLFD 205
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP +D+ + PLQLQI SLEYSSY+GKIG+GRIL GR++ LQDVV MNGPDDKP
Sbjct: 206 AILEHVPAREDDPDGPLQLQITSLEYSSYVGKIGVGRILRGRVRGLQDVVWMNGPDDKPT 265
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+INQ+ F+GL+RV V EAL+GDIVLI GIEEI IGSTIC P P GLPML IDEPTL
Sbjct: 266 KARINQVLTFRGLERVQVEEALAGDIVLINGIEEISIGSTICAPDAPEGLPMLKIDEPTL 325
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN+SPLAGREGKF+TTRQI++RLD E+K+N+ LRV Q ++DDS YEVSGRGELHL
Sbjct: 326 TMNFMVNSSPLAGREGKFVTTRQIRDRLDRELKSNMALRVVQAENDDSTYEVSGRGELHL 385
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYEL+VSRPRV+FK ++G +EPYENL VD+EE +QG +M++L R GDL
Sbjct: 386 TILIENMRREGYELAVSRPRVVFKMVDGVRHEPYENLTVDVEETSQGGVMEELGRRRGDL 445
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + K RVRLEYRIP+RGLIGFQ EF+TLTRGTGL+SHVF++YAP N SK +LG R
Sbjct: 446 QNMEPDGKGRVRLEYRIPARGLIGFQGEFMTLTRGTGLMSHVFDDYAPVDN-SKGELGGR 504
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY++WKLQDRGR+F++HND VYEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 505 RNGVLISQDDGAAVAYAIWKLQDRGRMFVSHNDPVYEGMIIGIHSRDNDLVVNPIKGKQL 564
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L+ PI+++LEYA+EFI+DDELVE+TPK+IRLRKRFLKE+ERKK
Sbjct: 565 TNVRSSGTDEAVRLVPPIEMSLEYAVEFIDDDELVEVTPKSIRLRKRFLKEHERKK 620
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 25 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVDARVMDSNDIEKERGITILSKNCAVEYKG 84
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 85 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVV 144
Query: 176 NKIDK 180
NKID+
Sbjct: 145 NKIDR 149
>gi|300312895|ref|YP_003776987.1| GTP-binding elongation factor protein [Herbaspirillum seropedicae
SmR1]
gi|300075680|gb|ADJ65079.1| GTP-binding elongation factor protein [Herbaspirillum seropedicae
SmR1]
Length = 627
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/592 (73%), Positives = 519/592 (87%), Gaps = 1/592 (0%)
Query: 930 HVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINI 989
HVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN+IEKERGITI SKNC++EY GT INI
Sbjct: 30 HVDHGKTTLVDQLLRQSGTFRDNQQVDNRVMDSNDIEKERGITILSKNCAVEYKGTHINI 89
Query: 990 IDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDR 1049
+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVV+NKIDR
Sbjct: 90 VDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVLNKIDR 149
Query: 1050 SNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILK 1109
AR EW ++ATF+LFDKL ATEEQLDFPVIY S L+GYA+ + +AR+GNM PLF+AILK
Sbjct: 150 PGARAEWAINATFELFDKLGATEEQLDFPVIYASGLNGYASLDPEAREGNMEPLFDAILK 209
Query: 1110 YVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKI 1169
YVP KD+ + PLQLQI SLEYSSY+GKIG+GRIL+GR+K QDVV MNGPDDKP KA+I
Sbjct: 210 YVPARKDDPDAPLQLQITSLEYSSYVGKIGVGRILAGRVKGGQDVVWMNGPDDKPTKARI 269
Query: 1170 NQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINF 1229
NQ+ FKGL+RVLV+EAL+GDIVLI GIEEI IGSTIC P PNGLPML +DEPTLT+NF
Sbjct: 270 NQVLTFKGLERVLVDEALAGDIVLINGIEEIGIGSTICSPDAPNGLPMLKVDEPTLTMNF 329
Query: 1230 MVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILI 1289
MVN SPLAGREGKF+TTRQI++RL+ E+K+N+ LRV Q ++DDS YEVSGRGELHLTILI
Sbjct: 330 MVNTSPLAGREGKFVTTRQIRDRLEKELKSNMALRVVQAENDDSTYEVSGRGELHLTILI 389
Query: 1290 ENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIE 1349
ENMRREG+EL+VSRPRV+F+ +NG EPYENL VD+EE +QG +M++L R GDL+N+E
Sbjct: 390 ENMRREGFELAVSRPRVVFRMVNGVREEPYENLTVDVEETHQGGVMEELGRRRGDLQNME 449
Query: 1350 INEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
+ K RVRLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF++Y P + +K +L RRNGV
Sbjct: 450 PDGKGRVRLEYHIPARGLIGFQGEFMTLTRGTGLMSHVFDDYKPV-DTTKGELAGRRNGV 508
Query: 1410 LISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIR 1469
LISQ G AVAY+LWKLQDRGR+F++HND VYEGMIIGIHSRDNDL+VNPIK KQLTN+R
Sbjct: 509 LISQDDGAAVAYALWKLQDRGRMFVSHNDPVYEGMIIGIHSRDNDLVVNPIKGKQLTNVR 568
Query: 1470 SSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERKK
Sbjct: 569 ASGTDEAVRLVPPIELSLEYAVEFIEDDELVEVTPKSIRLRKRHLKEHERKK 620
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 77 HVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------------- 121
HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 30 HVDHGKTTLVDQLLRQSGTFRDNQQVDNRVMDSNDIEKERGITILSKNCAVEYKGTHINI 89
Query: 122 -DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +NKID+
Sbjct: 90 VDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVLNKIDR 149
>gi|409407355|ref|ZP_11255806.1| GTP-binding elongation factor protein [Herbaspirillum sp. GW103]
gi|386433106|gb|EIJ45932.1| GTP-binding elongation factor protein [Herbaspirillum sp. GW103]
Length = 613
Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/592 (73%), Positives = 518/592 (87%), Gaps = 1/592 (0%)
Query: 930 HVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINI 989
HVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN+IEKERGITI SKNC++EY GT INI
Sbjct: 16 HVDHGKTTLVDQLLRQSGTFRDNQQVDNRVMDSNDIEKERGITILSKNCAVEYKGTHINI 75
Query: 990 IDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDR 1049
+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVV+NKIDR
Sbjct: 76 VDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVLNKIDR 135
Query: 1050 SNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILK 1109
AR EW ++ATF+LFDKL ATEEQLDFPVIY S L+GYA+ + + R+GNM PLF+AILK
Sbjct: 136 PGARAEWAINATFELFDKLGATEEQLDFPVIYASGLNGYASLDPETREGNMEPLFDAILK 195
Query: 1110 YVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKI 1169
YVP KD+ + PLQLQI SLEYSSY+GKIG+GRIL+GR+K QDVV MNGP+DKP KA+I
Sbjct: 196 YVPARKDDPDAPLQLQITSLEYSSYVGKIGVGRILAGRVKGGQDVVWMNGPEDKPTKARI 255
Query: 1170 NQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINF 1229
NQ+ FKGL+RVLV+EAL+GDIVLI GIEEI IGSTIC P PNGLPML +DEPTLT+NF
Sbjct: 256 NQVLTFKGLERVLVDEALAGDIVLINGIEEIGIGSTICAPDAPNGLPMLKVDEPTLTMNF 315
Query: 1230 MVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILI 1289
MVN SPLAGREGKF+TTRQI++RL+ E+K+N+ LRV Q ++DDS YEVSGRGELHLTILI
Sbjct: 316 MVNTSPLAGREGKFVTTRQIRDRLEKELKSNMALRVVQAENDDSTYEVSGRGELHLTILI 375
Query: 1290 ENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIE 1349
ENMRREG+EL+VSRPRV+F+ ++G EPYENL VD+EE +QG +M++L R GDL+N+E
Sbjct: 376 ENMRREGFELAVSRPRVVFRMVDGVREEPYENLTVDVEETHQGGVMEELGRRRGDLQNME 435
Query: 1350 INEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
+ K RVRLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF++Y P + +K +L RRNGV
Sbjct: 436 PDGKGRVRLEYHIPARGLIGFQGEFMTLTRGTGLMSHVFDDYKPV-DTTKGELAGRRNGV 494
Query: 1410 LISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIR 1469
LISQ G AVAY+LWKLQDRGR+F++HND VYEGMIIGIHSRDNDL+VNPIK KQLTN+R
Sbjct: 495 LISQDDGAAVAYALWKLQDRGRMFVSHNDPVYEGMIIGIHSRDNDLVVNPIKGKQLTNVR 554
Query: 1470 SSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERKK
Sbjct: 555 ASGTDEAVRLVPPIELSLEYAVEFIEDDELVEVTPKSIRLRKRHLKEHERKK 606
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 77 HVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------------- 121
HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 16 HVDHGKTTLVDQLLRQSGTFRDNQQVDNRVMDSNDIEKERGITILSKNCAVEYKGTHINI 75
Query: 122 -DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +NKID+
Sbjct: 76 VDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVLNKIDR 135
>gi|415942722|ref|ZP_11555964.1| GTP-binding protein TypA/BipA [Herbaspirillum frisingense GSF30]
gi|407758799|gb|EKF68572.1| GTP-binding protein TypA/BipA [Herbaspirillum frisingense GSF30]
Length = 613
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/592 (73%), Positives = 518/592 (87%), Gaps = 1/592 (0%)
Query: 930 HVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINI 989
HVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN+IEKERGITI SKNC++EY GT INI
Sbjct: 16 HVDHGKTTLVDQLLRQSGTFRDNQQVDNRVMDSNDIEKERGITILSKNCAVEYKGTHINI 75
Query: 990 IDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDR 1049
+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVV+NKIDR
Sbjct: 76 VDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVLNKIDR 135
Query: 1050 SNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILK 1109
AR EW ++ATF+LFDKL ATEEQLDFPVIY S L+GYA+ + +AR G+M PLF+AILK
Sbjct: 136 PGARAEWAINATFELFDKLGATEEQLDFPVIYASGLNGYASLDPEARGGSMEPLFDAILK 195
Query: 1110 YVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKI 1169
YVP KD+ + PLQLQI SLEYSSY+GKIG+GRIL+GR+K QDVV MNGP+DKP KA+I
Sbjct: 196 YVPARKDDPDAPLQLQITSLEYSSYVGKIGVGRILAGRVKGGQDVVWMNGPEDKPTKARI 255
Query: 1170 NQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINF 1229
NQ+ FKGL+RVLV+EAL+GDIVLI GIEEI IGSTIC P PNGLPML +DEPTLT+NF
Sbjct: 256 NQVLTFKGLERVLVDEALAGDIVLINGIEEIGIGSTICSPDAPNGLPMLKVDEPTLTMNF 315
Query: 1230 MVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILI 1289
MVN SPLAGREGKF+TTRQI++RL+ E+K+N+ LRV Q ++DDS YEVSGRGELHLTILI
Sbjct: 316 MVNTSPLAGREGKFVTTRQIRDRLEKELKSNMALRVVQAENDDSTYEVSGRGELHLTILI 375
Query: 1290 ENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIE 1349
ENMRREG+EL+VSRPRV+F+ ++G EPYENL VD+EE +QG +M++L R GDL+N+E
Sbjct: 376 ENMRREGFELAVSRPRVVFRMVDGVREEPYENLTVDVEETHQGGVMEELGRRRGDLQNME 435
Query: 1350 INEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
+ K RVRLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF++Y P + +K +L RRNGV
Sbjct: 436 PDGKGRVRLEYHIPARGLIGFQGEFMTLTRGTGLMSHVFDDYKPV-DTTKGELAGRRNGV 494
Query: 1410 LISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIR 1469
LISQ G AVAY+LWKLQDRGR+F++HND VYEGMIIGIHSRDNDL+VNPIK KQLTN+R
Sbjct: 495 LISQDDGAAVAYALWKLQDRGRMFVSHNDPVYEGMIIGIHSRDNDLVVNPIKGKQLTNVR 554
Query: 1470 SSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERKK
Sbjct: 555 ASGTDEAVRLVPPIELSLEYAVEFIEDDELVEVTPKSIRLRKRHLKEHERKK 606
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 77 HVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------------- 121
HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 16 HVDHGKTTLVDQLLRQSGTFRDNQQVDNRVMDSNDIEKERGITILSKNCAVEYKGTHINI 75
Query: 122 -DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +NKID+
Sbjct: 76 VDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVLNKIDR 135
>gi|398832207|ref|ZP_10590371.1| GTP-binding protein TypA/BipA [Herbaspirillum sp. YR522]
gi|398223744|gb|EJN10079.1| GTP-binding protein TypA/BipA [Herbaspirillum sp. YR522]
Length = 610
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/592 (72%), Positives = 515/592 (86%), Gaps = 1/592 (0%)
Query: 930 HVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINI 989
HVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN+IEKERGITI SKNC++EY GT INI
Sbjct: 16 HVDHGKTTLVDQLLRQSGTFRENQQVDNRVMDSNDIEKERGITILSKNCAVEYKGTHINI 75
Query: 990 IDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDR 1049
+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVV+NKIDR
Sbjct: 76 VDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVLNKIDR 135
Query: 1050 SNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILK 1109
AR EW ++ATF+LFDKL ATEEQLDFPVIY S L+GYA ++ R+GNM PLF+AILK
Sbjct: 136 PGARAEWAINATFELFDKLGATEEQLDFPVIYASGLNGYAGNSADVREGNMEPLFDAILK 195
Query: 1110 YVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKI 1169
YVP +D+ N PLQLQI SLEYSSY+GKIG+GRIL+GR+K QDVV MNGPDDKP KA+I
Sbjct: 196 YVPAREDDPNAPLQLQITSLEYSSYVGKIGVGRILAGRVKGGQDVVWMNGPDDKPTKARI 255
Query: 1170 NQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINF 1229
NQ+ FKGL+RVLV+EAL+GDIVLI GIEEI IGSTIC PN LPML +DEPTLT+NF
Sbjct: 256 NQVLTFKGLERVLVDEALAGDIVLINGIEEIGIGSTICAVDAPNALPMLKVDEPTLTMNF 315
Query: 1230 MVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILI 1289
MVN SPLAGREGKF+TTRQI++RL+ E+K+N+ LRV Q + DDS YEVSGRGELHLTILI
Sbjct: 316 MVNTSPLAGREGKFVTTRQIRDRLERELKSNMALRVVQKEDDDSTYEVSGRGELHLTILI 375
Query: 1290 ENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIE 1349
ENMRREG+EL+VSRPRV+FK ++G EPYENL VD+EE +QG +M++L R GDL+N+E
Sbjct: 376 ENMRREGFELAVSRPRVVFKMVDGVRQEPYENLTVDVEEGHQGGVMEELGRRRGDLQNME 435
Query: 1350 INEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
+ K RVRLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF++Y + +K ++ RRNGV
Sbjct: 436 PDGKGRVRLEYHIPARGLIGFQGEFMTLTRGTGLMSHVFDDYKTI-DTTKGEMAGRRNGV 494
Query: 1410 LISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIR 1469
LISQ G AVAY+LWKLQDRGR+F++HND VYEGMIIGIHSRDNDL+VNPIK KQLTN+R
Sbjct: 495 LISQDDGAAVAYALWKLQDRGRMFVSHNDPVYEGMIIGIHSRDNDLVVNPIKGKQLTNVR 554
Query: 1470 SSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR+LKE+ERKK
Sbjct: 555 ASGTDEAVRLVPPIELSLEYAVEFIEDDELVEVTPKSIRLRKRYLKEHERKK 606
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 77 HVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------------- 121
HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 16 HVDHGKTTLVDQLLRQSGTFRENQQVDNRVMDSNDIEKERGITILSKNCAVEYKGTHINI 75
Query: 122 -DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +NKID+
Sbjct: 76 VDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVLNKIDR 135
>gi|329905070|ref|ZP_08273998.1| GTP-binding protein TypA/BipA [Oxalobacteraceae bacterium IMCC9480]
gi|327547742|gb|EGF32518.1| GTP-binding protein TypA/BipA [Oxalobacteraceae bacterium IMCC9480]
Length = 610
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/596 (70%), Positives = 520/596 (87%), Gaps = 2/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++AR+MDSN++EKERGITI SKNC++EY GT
Sbjct: 12 AIIAHVDHGKTTLVDKLLRQSGTFRDNQQVDARVMDSNDLEKERGITILSKNCAVEYEGT 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 72 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVVN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARPEW ++ATF+LFDKL ATEEQLDFPV++ SAL+GY++ +S R G+M PLF+
Sbjct: 132 KIDRPGARPEWAINATFELFDKLGATEEQLDFPVVFASALNGYSSLDSTVRDGDMKPLFD 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP +D+ + PLQLQI SL+YSSY+GKIGIGRI GR++ LQDV+IM+GPD P
Sbjct: 192 AILRHVPAREDDQDGPLQLQISSLDYSSYVGKIGIGRITRGRVRGLQDVIIMDGPDGVPR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA++NQ+ FKGLDRVLV EA++GDIVLI GI+E+ IG+T+C P P+ LPML +DEPTL
Sbjct: 252 KARVNQVLNFKGLDRVLVEEAVAGDIVLINGIDELGIGTTVCAPDMPDALPMLTVDEPTL 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVNNSPLAGREGKF+T+RQ++ RLD E+K N+ LRV DD+I+EVSGRGELHL
Sbjct: 312 TMNFMVNNSPLAGREGKFVTSRQLRERLDRELKANVALRVAPTD-DDTIFEVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREG+EL+VSRPRV+FK ++G +EP+E L VD+EE+NQG +M++L R GDL
Sbjct: 371 TILIENMRREGFELAVSRPRVVFKMVDGVRHEPFELLSVDVEEVNQGGVMEELGRRRGDL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + K RVRLEYRIP+RGLIGFQ EF+TLTRGTGL+SH+F+EYAP N ++ ++ R
Sbjct: 431 QNMESDGKGRVRLEYRIPARGLIGFQGEFMTLTRGTGLMSHIFDEYAPVDN-TRGEMASR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVL+SQ G AVAY+LWKLQDRGR+F+ HND VYEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 490 RNGVLVSQDDGAAVAYALWKLQDRGRMFVVHNDPVYEGMIIGIHSRDNDLVVNPIKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L+ P++++LEYA+EFI+DDELVEITPK+IRLRKR+LKE +RKK
Sbjct: 550 TNVRSSGTDEAVRLVPPVQMSLEYAVEFIDDDELVEITPKSIRLRKRYLKEADRKK 605
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDKLLRQSGTFRDNQQVDARVMDSNDLEKERGITILSKNCAVEYEG 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 71 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVV 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|237748741|ref|ZP_04579221.1| GTP-binding elongation factor family protein [Oxalobacter formigenes
OXCC13]
gi|229380103|gb|EEO30194.1| GTP-binding elongation factor family protein [Oxalobacter formigenes
OXCC13]
Length = 610
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/596 (69%), Positives = 511/596 (85%), Gaps = 2/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 12 AIIAHVDHGKTTLVDQLLRQSGTFRENQAVSERVMDSNDLEKERGITILAKNCAVEYEGT 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 72 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTRKALGLGLKPIVVIN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ATFDLFDKL ATEEQLDFPVIY S L+GYA + R G+M PLF+
Sbjct: 132 KIDRPGARPDWVINATFDLFDKLGATEEQLDFPVIYASGLNGYAGLDDSVRSGDMRPLFD 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILKYVPV + + P Q+QI SL+YSSY+GKIG+GR+ GR+K LQDV+I+NGPD P
Sbjct: 192 AILKYVPVRDADPDGPFQMQISSLDYSSYVGKIGVGRVNRGRVKPLQDVIILNGPDSTPI 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+INQ+ FKGL+R +++EA +GDIVLI GIE I IGSTICDP P LPML +DEPTL
Sbjct: 252 KARINQVLSFKGLERKVIDEASAGDIVLINGIEAIDIGSTICDPEHPEALPMLTVDEPTL 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SP AGREGKF+T+RQ++ RLD E+K+N+ LRV DD+I+EVSGRGELHL
Sbjct: 312 TMNFMVNTSPFAGREGKFVTSRQLRERLDRELKSNVALRVAPTD-DDTIFEVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYEL+VSRPRV++K ++G +EPYE L VD++E NQG +M++L R GDL
Sbjct: 371 TILIENMRREGYELAVSRPRVVYKDIDGVRHEPYEALTVDVDETNQGAVMEELGRRRGDL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + K RVRLEYRIP+RGLIGFQ+EF+TLTRGTGL+SHVF++Y P + SK + G R
Sbjct: 431 QDMQPDSKGRVRLEYRIPARGLIGFQSEFMTLTRGTGLMSHVFDDYYPV-DPSKAEAGGR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQ+RGR+F+NHND VYEGMIIGIHSR+NDL+VNPIK KQL
Sbjct: 490 RNGVLISQDDGAAVAYALWKLQERGRMFVNHNDPVYEGMIIGIHSRENDLVVNPIKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEA++L+ PI+++LEYA+EFI DDELVEITPK+IRLRKR L + +R++
Sbjct: 550 TNIRASGTDEAVRLVPPIQMSLEYAVEFIEDDELVEITPKSIRLRKRHLSDIDRRR 605
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E +++ + N + IT L
Sbjct: 11 VAIIAHVDHGKTTLVDQLLRQSGTFRENQAVSERVMDSNDLEKERGITILAKNCAVEYEG 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 71 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTRKALGLGLKPIVVI 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|395761104|ref|ZP_10441773.1| GTP-binding elongation factor family protein [Janthinobacterium
lividum PAMC 25724]
Length = 612
Score = 903 bits (2333), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/596 (69%), Positives = 512/596 (85%), Gaps = 2/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI SKNC++EY GT
Sbjct: 14 AIIAHVDHGKTTLVDQLLRQSGTFRENQAVDTRVMDSNDLEKERGITILSKNCAVEYEGT 73
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLLIDA EGPMPQTRFVTRKAL LG KPIV+VN
Sbjct: 74 HINIVDTPGHADFGGEVERVLSMVDSVLLLIDAQEGPMPQTRFVTRKALALGLKPIVIVN 133
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+W ++ TF+LFDKL AT+EQLDFP+IY S L+GYA R G+M P+F+
Sbjct: 134 KVDRPGARPDWAINQTFELFDKLGATDEQLDFPIIYASGLNGYAGLTEDVRSGDMKPMFD 193
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV DN PLQ+QI SL+YSSY+GKIGIGR+ G +K QDV+++NGP P
Sbjct: 194 AILEHVPVRDDNPEGPLQMQITSLDYSSYVGKIGIGRVNRGTVKVGQDVLVINGPGATPI 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ FKGL+RVLV+EA++GDI LI GI+EI IGST+C P P+ LPML +DEPTL
Sbjct: 254 KGRINQVLNFKGLERVLVDEAVAGDICLINGIDEIGIGSTLCAPDTPDALPMLTVDEPTL 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVNNSPLAGREGKF+T+RQ+++RLD E+K N+ LRV+ DD+I+EVSGRGELHL
Sbjct: 314 TMNFMVNNSPLAGREGKFVTSRQLRDRLDRELKANVALRVSPTD-DDTIFEVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREG+EL+VSRPRV+FK ++G +EP+ENL VD+EE+NQG +M++L R GDL
Sbjct: 373 TILIENMRREGFELAVSRPRVVFKMVDGVRHEPFENLSVDVEEVNQGGVMEELGRRRGDL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + K RVRLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF EYAP N ++ ++ R
Sbjct: 433 QNMESDGKGRVRLEYLIPARGLIGFQGEFMTLTRGTGLMSHVFHEYAPVDN-TRGEMAGR 491
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY++WKLQDRGR+F++HND VYEGM+IGIHSRDNDL+VNPIK KQL
Sbjct: 492 RNGVLISQDDGAAVAYAIWKLQDRGRMFVSHNDPVYEGMVIGIHSRDNDLVVNPIKGKQL 551
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L+ PI+++LEYA+EFI DDELVEITPK+IRLRKRFLKE+ERKK
Sbjct: 552 TNVRSSGTDEAVRLVPPIQMSLEYAVEFIEDDELVEITPKSIRLRKRFLKEHERKK 607
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDQLLRQSGTFRENQAVDTRVMDSNDLEKERGITILSKNCAVEYEG 72
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L++ A +G MPQTR A G+ IV +
Sbjct: 73 THINIVDTPGHADFGGEVERVLSMVDSVLLLIDAQEGPMPQTRFVTRKALALGLKPIVIV 132
Query: 176 NKIDK 180
NK+D+
Sbjct: 133 NKVDR 137
>gi|445495226|ref|ZP_21462270.1| GTP-binding protein TypA [Janthinobacterium sp. HH01]
gi|444791387|gb|ELX12934.1| GTP-binding protein TypA [Janthinobacterium sp. HH01]
Length = 610
Score = 896 bits (2316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/596 (69%), Positives = 509/596 (85%), Gaps = 2/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI SKNC++EY GT
Sbjct: 12 AIIAHVDHGKTTLVDQLLRQSGTFRENQAVDTRVMDSNDLEKERGITILSKNCAVEYEGT 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 72 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVVN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +W ++ TF+LFDKL AT+EQLDFP++Y S L+GYA R G+M PLF+
Sbjct: 132 KVDRPGARADWAINQTFELFDKLGATDEQLDFPIVYASGLNGYAGLTEDVRSGDMKPLFD 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV DN PLQ+QI SL+YSSY+GKIGIGR+ G +K QDV+++NGP P
Sbjct: 192 AILEHVPVRDDNPEGPLQMQITSLDYSSYVGKIGIGRVNRGTVKVGQDVLVINGPGATPI 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ FKGL+RVLVNEA++GDI LI GI+EI IGST+C P LPML +DEPTL
Sbjct: 252 KGRINQVLNFKGLERVLVNEAVAGDICLINGIDEIGIGSTLCAVDTPEPLPMLTVDEPTL 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVNNSPLAGREGKF+T+RQ+++RLD E+K N+ LRV + DD+ +EVSGRGELHL
Sbjct: 312 TMNFMVNNSPLAGREGKFVTSRQLRDRLDKELKANVALRVAATE-DDTTFEVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREG+E++VSRPRV+FK ++G +EP+E L VD+EE NQG +M++L R GDL
Sbjct: 371 TILIENMRREGFEMAVSRPRVVFKMVDGVRHEPFEQLSVDVEEANQGGVMEELGRRRGDL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + K RVRLEY+IP+RGLIGFQ EF+TLTRGTGL+SHVF+EYAP N +K +LG R
Sbjct: 431 QNMESDGKGRVRLEYKIPARGLIGFQGEFMTLTRGTGLMSHVFDEYAPVDN-TKGELGGR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY++WKLQDRGR+F+ HND VYEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 490 RNGVLISQDDGAAVAYAIWKLQDRGRMFVVHNDPVYEGMIIGIHSRDNDLVVNPIKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L+ PI+++LEYA+EFI+DDELVEITPK+IRLRKRFLKE+ERKK
Sbjct: 550 TNVRSSGTDEAVRLVPPIQMSLEYAVEFIDDDELVEITPKSIRLRKRFLKEHERKK 605
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDQLLRQSGTFRENQAVDTRVMDSNDLEKERGITILSKNCAVEYEG 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 71 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVV 130
Query: 176 NKIDK 180
NK+D+
Sbjct: 131 NKVDR 135
>gi|427402929|ref|ZP_18893926.1| GTP-binding protein TypA/BipA [Massilia timonae CCUG 45783]
gi|425718248|gb|EKU81196.1| GTP-binding protein TypA/BipA [Massilia timonae CCUG 45783]
Length = 610
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/596 (70%), Positives = 504/596 (84%), Gaps = 2/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI SKNC++EY GT
Sbjct: 12 AIIAHVDHGKTTLVDQLLRQSGTFRENQAVDTRVMDSNDLEKERGITILSKNCAVEYEGT 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 72 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVVN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +W ++ TF+LFDKL AT+EQLDFP++Y S L+GYA + R G+M PLF+
Sbjct: 132 KIDRPGARADWAINQTFELFDKLGATDEQLDFPIVYASGLNGYAGMDESVRGGDMKPLFD 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILKYVPV DN + PLQ+QI SL+YSSY+GKIGIGR+ G +K+ QDV+I+NGPD P
Sbjct: 192 AILKYVPVRDDNPDGPLQMQITSLDYSSYVGKIGIGRVNRGTVKTGQDVLILNGPDSTPI 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ FKGL+RVLV+ A++GDI LI GIEEI IGST+C P LPML +DEPTL
Sbjct: 252 KGRINQVLNFKGLERVLVDSAVAGDICLINGIEEIGIGSTVCAVDTPEALPMLTVDEPTL 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVNNSPLAGREGKF+T+RQ++ RL+ E+K N+ LRV DD+ +EVSGRGELHL
Sbjct: 312 TMNFMVNNSPLAGREGKFVTSRQLRERLERELKANVALRVAPTD-DDTTFEVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+EL+VSRPRV++K ++G EPYENL VD+EE NQG +M++L R GDL
Sbjct: 371 TILLENMRREGFELAVSRPRVVYKMVDGVRQEPYENLTVDVEEANQGGVMEELGRRRGDL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + K RVRLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF EYA N SK DL R
Sbjct: 431 QNMESDGKGRVRLEYLIPARGLIGFQGEFMTLTRGTGLMSHVFHEYAAVDN-SKGDLAGR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY++WKLQDRGR+F+ HN VYEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 490 RNGVLISQDDGAAVAYAIWKLQDRGRMFVEHNTPVYEGMIIGIHSRDNDLVVNPIKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L+ PI+++LEYA+EFI DDELVEITPK+IRLRKRFLKE+ERKK
Sbjct: 550 TNVRSSGTDEAVRLVPPIQMSLEYAVEFIEDDELVEITPKSIRLRKRFLKEHERKK 605
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDQLLRQSGTFRENQAVDTRVMDSNDLEKERGITILSKNCAVEYEG 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 71 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALALGLKPIVVV 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|237746609|ref|ZP_04577089.1| GTP-binding protein TypA/BipA [Oxalobacter formigenes HOxBLS]
gi|229377960|gb|EEO28051.1| GTP-binding protein TypA/BipA [Oxalobacter formigenes HOxBLS]
Length = 610
Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/596 (68%), Positives = 514/596 (86%), Gaps = 2/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 12 AIIAHVDHGKTTLVDQLLRQSGTFRENQAVSERVMDSNDLEKERGITILAKNCAVEYEGT 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 72 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTRKALGLGLKPIVVIN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ATF+LFDKL ATEEQLDFPVIY S L+GYA + R G+M PLF+
Sbjct: 132 KIDRPGARPDWVINATFELFDKLGATEEQLDFPVIYASGLNGYAGLDDSVRSGDMRPLFD 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL+YVPV + + P Q+QI SL+YSSY+GKIGIGR+ GR++ LQDVVIMNGP+ P
Sbjct: 192 AILQYVPVRDADPDGPFQMQISSLDYSSYVGKIGIGRVNRGRVRPLQDVVIMNGPESAPV 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA++NQ+ FKGL+R +++EA +GDIVLI GIE I IGSTICDP P LPML +DEPTL
Sbjct: 252 KARVNQVLSFKGLERKVIDEASAGDIVLINGIEAIDIGSTICDPEHPEALPMLTVDEPTL 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SP AGREGKF+T+RQ++ RL+ E+K+N+ LRV DD+++EVSGRGELHL
Sbjct: 312 TMNFMVNTSPFAGREGKFVTSRQLRERLERELKSNVALRVAPTD-DDTVFEVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYEL+VSRPRV++KT++G +EPYE L VD++E +QG +M++L R G+L
Sbjct: 371 TILIENMRREGYELAVSRPRVVYKTIDGIRHEPYEALTVDVDEAHQGGVMEELGRRRGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + K RVRLEYRIP+RGLIGFQ+EF+TLTRGTG++SHVF++Y P ++++ D G R
Sbjct: 431 QDMQPDSKGRVRLEYRIPARGLIGFQSEFMTLTRGTGIMSHVFDDYYPV-DENRPDTGGR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+NHND VYEGMIIGIHSR+ND++VNPIK KQL
Sbjct: 490 RNGVLISQEDGAAVAYALWKLQDRGRMFVNHNDPVYEGMIIGIHSRENDIVVNPIKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEA++L+ PI+++LEYA+EFI DDELVEITPK+IRLRKR+L + +R++
Sbjct: 550 TNIRASGTDEAVRLVPPIQMSLEYAVEFIEDDELVEITPKSIRLRKRYLSDIDRRR 605
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E +++ + N + IT L
Sbjct: 11 VAIIAHVDHGKTTLVDQLLRQSGTFRENQAVSERVMDSNDLEKERGITILAKNCAVEYEG 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 71 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTRKALGLGLKPIVVI 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|332283705|ref|YP_004415616.1| GTP-binding elongation factor [Pusillimonas sp. T7-7]
gi|330427658|gb|AEC18992.1| GTP-binding elongation factor [Pusillimonas sp. T7-7]
Length = 606
Score = 873 bits (2256), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/596 (67%), Positives = 505/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDS +IEKERGITI +KNCS++Y GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRDNQQVSERVMDSGDIEKERGITILAKNCSVQYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD V+LL+DAVEGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVVLLVDAVEGPMPQTRFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V++ATFDLFDKL ATEEQLDFP+IY S L GYA + R+G+M PLF+
Sbjct: 129 KIDRPGARPDFVINATFDLFDKLGATEEQLDFPIIYASGLSGYAGLTEEVREGDMRPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILKYVP +D+ + PLQ+Q+ISL+YS+Y+GKIG+GRI GR+++ QDVVI GP+ KP
Sbjct: 189 AILKYVPQREDDPDGPLQMQVISLDYSTYVGKIGVGRINRGRLRAAQDVVISFGPEGKPF 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K ++NQ+ F+GL+R V EA +GDIVLI GIE+I IG T+ DP +P LPML IDEPTL
Sbjct: 249 KGRVNQVLKFQGLEREQVEEAQAGDIVLINGIEDIGIGCTLMDPERPEALPMLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV + DD+++EV GRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRVNETD-DDTVFEVCGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK NG EPYE L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILLENMRREGYELAVSRPRVMFKEENGVRLEPYELLTVDVEDGHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEYRIP+RGLIGFQ+EF+TLTRGTGL+SH+F++YAP +G+R
Sbjct: 428 QDMQADGRGRTRLEYRIPARGLIGFQSEFMTLTRGTGLMSHIFDDYAPMREGG---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIKEK+L
Sbjct: 485 RNGVLISQDEGAAVAYALWKLQDRGRMFVSPQEPLYEGMIIGIHSRDNDLVVNPIKEKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG DE I L+ P+++TLEYA+EFI+DDELVE+TPK+IRLRKR+L+E+ER++
Sbjct: 545 TNVRSSGKDEHIDLVPPVQLTLEYAVEFISDDELVEVTPKSIRLRKRYLQEHERRR 600
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F + +++ + + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRDNQQVSERVMDSGDIEKERGITILAKNCSVQYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIIDTPGHADFGGEVERVLSMVDGVVLLVDAVEGPMPQTRFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|374371472|ref|ZP_09629432.1| GTP-binding protein [Cupriavidus basilensis OR16]
gi|373096973|gb|EHP38134.1| GTP-binding protein [Cupriavidus basilensis OR16]
Length = 606
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/596 (68%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR NQ + R+MDSN+IEKERGITI +KNC++EY+GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQAGTFRDNQQMVERVMDSNDIEKERGITILAKNCAVEYDGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWV++ TFDLFDKL AT+EQLDFPVIY S L+GYA R+G+M PLFE
Sbjct: 129 KVDRPGARPEWVINQTFDLFDKLGATDEQLDFPVIYASGLNGYAGLTDDVREGDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+L VPV DN + PLQLQIISL+Y+SY+GKIG+GRI GR +SLQDVV+ GP+ P
Sbjct: 189 TVLAKVPVRDDNPDGPLQLQIISLDYNSYVGKIGVGRISRGRARSLQDVVVKFGPEGNPI 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F+GL+R +V EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 249 KGRINQVLKFQGLEREIVAEAEAGDIVLINGIEELGIGCTVCAPDAQDALPMLKVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ++ RLD E+K+N+ LRV + DD+I+EVSGRGELHL
Sbjct: 309 TMNFCVNTSPLAGREGKFVTSRQLRERLDRELKSNVALRVAETG-DDTIFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G +EPYE L VD+E+ +QG +M++L R G+L
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKHEPYELLTVDVEDGHQGSVMEELGRRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYR+P+RGLIGFQ EF+TLTRGTGLISH+F++YAP LG+R
Sbjct: 428 LDMASDGKGRTRLEYRVPARGLIGFQGEFLTLTRGTGLISHIFDDYAPLREGG---LGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 HNGVLISQDDGDAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L++PI+++LEYA+EFI+DDELVEITPK+IRLRKR LKE+ERK+
Sbjct: 545 TNVRASGTDEAVRLVTPIQMSLEYAVEFISDDELVEITPKSIRLRKRHLKEHERKR 600
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQAGTFRDNQQMVERVMDSNDIEKERGITILAKNCAVEYDG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|207743354|ref|YP_002259746.1| gtpase typa-related protein [Ralstonia solanacearum IPO1609]
gi|300704329|ref|YP_003745932.1| translational regulator, GTP-binding protein [Ralstonia solanacearum
CFBP2957]
gi|421888442|ref|ZP_16319537.1| Translational regulator, GTP-binding protein [Ralstonia solanacearum
K60-1]
gi|421897242|ref|ZP_16327610.1| gtpase typa-related protein [Ralstonia solanacearum MolK2]
gi|206588448|emb|CAQ35411.1| gtpase typa-related protein [Ralstonia solanacearum MolK2]
gi|206594751|emb|CAQ61678.1| gtpase typa-related protein [Ralstonia solanacearum IPO1609]
gi|299071993|emb|CBJ43323.1| Translational regulator, GTP-binding protein [Ralstonia solanacearum
CFBP2957]
gi|378966252|emb|CCF96285.1| Translational regulator, GTP-binding protein [Ralstonia solanacearum
K60-1]
Length = 606
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 500/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+N+ I R+MDSN+IEKERGITI +KNC++EYNGT
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNGT 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWV++ TFDLFDKL A ++QLDFPV+Y S L+GYA R+G+M PLFE
Sbjct: 128 KVDRPGARPEWVINQTFDLFDKLGANDDQLDFPVVYASGLNGYAGLTDDVREGDMKPLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL VP D+ N P QLQIISL+YSSY+GKIG+GRI GR++ LQDVV+ GPD P
Sbjct: 188 TILDKVPQRNDDPNGPFQLQIISLDYSSYVGKIGVGRITRGRVRPLQDVVVKFGPDGAPI 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K ++NQ+ F+GL+R +V EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 248 KGRVNQVLKFRGLEREIVQEAEAGDIVLINGIEELGIGCTVCAPDAQDALPMLKVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+I+EVSGRGELHL
Sbjct: 308 TMNFCVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-KDTGDDTIFEVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G +EP+E L VD+E+ +QG +M++L R G+L
Sbjct: 367 TILVENMRREGYELAVSRPRVVFKDIDGVKHEPFERLTVDVEDGHQGGVMEELGRRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++Y+P + DLG+R
Sbjct: 427 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYSPV---KEGDLGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 484 HNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 544 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEVTPKSIRLRKRHLKEHERKR 599
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 67 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 126
Query: 176 NKIDK 180
NK+D+
Sbjct: 127 NKVDR 131
>gi|300691714|ref|YP_003752709.1| translational regulator, GTP-binding protein [Ralstonia solanacearum
PSI07]
gi|299078774|emb|CBJ51434.1| Translational regulator, GTP-binding protein [Ralstonia solanacearum
PSI07]
gi|344166904|emb|CCA79094.1| translational regulator, GTP-binding protein [blood disease bacterium
R229]
gi|344171614|emb|CCA84234.1| translational regulator, GTP-binding protein [Ralstonia syzygii R24]
Length = 606
Score = 870 bits (2247), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/596 (67%), Positives = 500/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+N+ I R+MDSN+IEKERGITI +KNC++EYNGT
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNGT 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWV++ TFDLFDKL A ++QLDFPV+Y S L+GYA R G+M PLFE
Sbjct: 128 KVDRPGARPEWVINQTFDLFDKLGANDDQLDFPVVYASGLNGYAGLTEDVRSGDMKPLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL+ VP D+ N PLQLQIISL+YSSY+GKIG+GRI GR++ LQDVV+ GP+ P
Sbjct: 188 TILEKVPQRDDDPNGPLQLQIISLDYSSYVGKIGVGRITRGRVRPLQDVVVKFGPEGAPI 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K ++NQ+ F+GL+R LV EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 248 KGRVNQVLKFRGLERELVQEAEAGDIVLINGIEELGIGCTVCAPDAQDALPMLKVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+I+EVSGRGELHL
Sbjct: 308 TMNFCVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-KDTGDDTIFEVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK + G +EP+E L VD+E+ +QG +M++L R G+L
Sbjct: 367 TILVENMRREGYELAVSRPRVVFKEIEGVKHEPFERLTVDVEDGHQGGVMEELGRRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++Y+P + DLG+R
Sbjct: 427 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYSPV---REGDLGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 484 HNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 544 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEVTPKSIRLRKRHLKEHERKR 599
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 67 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 126
Query: 176 NKIDK 180
NK+D+
Sbjct: 127 NKVDR 131
>gi|33602219|ref|NP_889779.1| GTP-binding elongation factor [Bordetella bronchiseptica RB50]
gi|410473542|ref|YP_006896823.1| GTP-binding elongation factor [Bordetella parapertussis Bpp5]
gi|412338369|ref|YP_006967124.1| GTP-binding elongation factor [Bordetella bronchiseptica 253]
gi|427814157|ref|ZP_18981221.1| GTP-binding elongation factor [Bordetella bronchiseptica 1289]
gi|33576657|emb|CAE33735.1| GTP-binding elongation factor [Bordetella bronchiseptica RB50]
gi|408443652|emb|CCJ50329.1| GTP-binding elongation factor [Bordetella parapertussis Bpp5]
gi|408768203|emb|CCJ52963.1| GTP-binding elongation factor [Bordetella bronchiseptica 253]
gi|410565157|emb|CCN22709.1| GTP-binding elongation factor [Bordetella bronchiseptica 1289]
Length = 606
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/596 (67%), Positives = 508/596 (85%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ++ R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQSVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V++ATF+LFDKL ATEEQLDFPV+Y S L GYA R G+M PLFE
Sbjct: 129 KIDRPGARPDFVINATFELFDKLGATEEQLDFPVVYASGLSGYAGLTDDVRSGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYVP D++N PLQ+QIISL+Y+SY+GKIG+GRI GR++ DV GPD +
Sbjct: 189 AIMKYVPQRDDDANGPLQMQIISLDYNSYVGKIGVGRINRGRMRGNMDVAFRFGPDGEVQ 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+RV+V+EA +GDIVL+ GIE++ IGSTI DPS P GLP+L IDEPTL
Sbjct: 249 RGRINQVMKFSGLERVVVDEAEAGDIVLVNGIEDLHIGSTITDPSTPEGLPVLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQI++RL+ E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQIRDRLERELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EP+E L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKCEPFEALTVDVEDAHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH+F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYVIPARGLIGFQNEFLTLTRGTGLMSHIFHEYAPLREGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGDAVAYALWKLQDRGRMFVSPGEPLYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVEITPK+IRLRKR+L+E+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEITPKSIRLRKRYLQEHERRR 600
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQSVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|83749669|ref|ZP_00946650.1| GTP-binding protein TypA/BipA [Ralstonia solanacearum UW551]
gi|386333727|ref|YP_006029898.1| translational regulator, GTP-binding protein [Ralstonia solanacearum
Po82]
gi|83723671|gb|EAP70868.1| GTP-binding protein TypA/BipA [Ralstonia solanacearum UW551]
gi|334196177|gb|AEG69362.1| translational regulator, GTP-binding protein [Ralstonia solanacearum
Po82]
Length = 634
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 500/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+N+ I R+MDSN+IEKERGITI +KNC++EYNGT
Sbjct: 36 AIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNGT 95
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 96 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 155
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWV++ TFDLFDKL A ++QLDFPV+Y S L+GYA R+G+M PLFE
Sbjct: 156 KVDRPGARPEWVINQTFDLFDKLGANDDQLDFPVVYASGLNGYAGLTDDVREGDMKPLFE 215
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL VP D+ N P QLQIISL+YSSY+GKIG+GRI GR++ LQDVV+ GPD P
Sbjct: 216 TILDKVPQRNDDPNGPFQLQIISLDYSSYVGKIGVGRITRGRVRPLQDVVVKFGPDGAPI 275
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K ++NQ+ F+GL+R +V EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 276 KGRVNQVLKFRGLEREIVQEAEAGDIVLINGIEELGIGCTVCAPDAQDALPMLKVDEPTL 335
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+I+EVSGRGELHL
Sbjct: 336 TMNFCVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-KDTGDDTIFEVSGRGELHL 394
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G +EP+E L VD+E+ +QG +M++L R G+L
Sbjct: 395 TILVENMRREGYELAVSRPRVVFKDIDGVKHEPFERLTVDVEDGHQGGVMEELGRRKGEL 454
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++Y+P + DLG+R
Sbjct: 455 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYSPV---KEGDLGER 511
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 512 HNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 571
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 572 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEVTPKSIRLRKRHLKEHERKR 627
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 35 IAIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNG 94
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 95 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 154
Query: 176 NKIDK 180
NK+D+
Sbjct: 155 NKVDR 159
>gi|33592378|ref|NP_880022.1| GTP-binding elongation factor [Bordetella pertussis Tohama I]
gi|33596486|ref|NP_884129.1| GTP-binding elongation factor [Bordetella parapertussis 12822]
gi|384203680|ref|YP_005589419.1| GTP-binding elongation factor [Bordetella pertussis CS]
gi|408415184|ref|YP_006625891.1| GTP-binding elongation factor [Bordetella pertussis 18323]
gi|410419697|ref|YP_006900146.1| GTP-binding elongation factor [Bordetella bronchiseptica MO149]
gi|427821372|ref|ZP_18988435.1| GTP-binding elongation factor [Bordetella bronchiseptica D445]
gi|427823437|ref|ZP_18990499.1| GTP-binding elongation factor [Bordetella bronchiseptica Bbr77]
gi|33566255|emb|CAE37166.1| GTP-binding elongation factor [Bordetella parapertussis]
gi|33572023|emb|CAE41546.1| GTP-binding elongation factor [Bordetella pertussis Tohama I]
gi|332381794|gb|AEE66641.1| GTP-binding elongation factor [Bordetella pertussis CS]
gi|401777354|emb|CCJ62640.1| GTP-binding elongation factor [Bordetella pertussis 18323]
gi|408446992|emb|CCJ58664.1| GTP-binding elongation factor [Bordetella bronchiseptica MO149]
gi|410572372|emb|CCN20647.1| GTP-binding elongation factor [Bordetella bronchiseptica D445]
gi|410588702|emb|CCN03762.1| GTP-binding elongation factor [Bordetella bronchiseptica Bbr77]
Length = 606
Score = 868 bits (2243), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/596 (67%), Positives = 508/596 (85%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ++ R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQSVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V++ATF+LFDKL ATEEQLDFPV+Y S L GYA R G+M PLFE
Sbjct: 129 KIDRPGARPDFVINATFELFDKLGATEEQLDFPVVYASGLSGYAGLTDDVRSGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYVP D++N PLQ+QIISL+Y+SY+GKIG+GRI GR++ DV GPD +
Sbjct: 189 AIMKYVPQRDDDANGPLQMQIISLDYNSYVGKIGVGRINRGRMRGNMDVAFRFGPDGEVQ 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+RV+V+EA +GDIVL+ GIE++ IGSTI DPS P GLP+L IDEPTL
Sbjct: 249 RGRINQVMKFSGLERVVVDEAEAGDIVLVNGIEDLHIGSTITDPSTPEGLPVLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQI++RL+ E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQIRDRLERELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EP+E L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKCEPFEALTVDVEDAHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH+F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYIIPARGLIGFQNEFLTLTRGTGLMSHIFHEYAPLREGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGDAVAYALWKLQDRGRMFVSPGEPLYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVEITPK+IRLRKR+L+E+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEITPKSIRLRKRYLQEHERRR 600
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQSVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|241662821|ref|YP_002981181.1| GTP-binding protein TypA [Ralstonia pickettii 12D]
gi|240864848|gb|ACS62509.1| GTP-binding protein TypA [Ralstonia pickettii 12D]
Length = 606
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 498/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+N+ I R+MDSN+IEKERGITI +KNC++EYNGT
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNGT 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWV++ TFDLFDKL A ++QLDFPV+Y S L+GYA R+G+M PLFE
Sbjct: 128 KVDRPGARPEWVINQTFDLFDKLGANDDQLDFPVVYASGLNGYAGLTDDVREGDMKPLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL VP D+ N P QLQIISL+YSSY+GKIG+GRI GR++ LQDVV+ GP+ P
Sbjct: 188 TILDKVPQRNDDPNGPFQLQIISLDYSSYVGKIGVGRITRGRVRPLQDVVVKFGPEGNPI 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F+GL+R LV EA +GDIVLI GIEE+ IG T+C P LPML +DEPTL
Sbjct: 248 KGRINQVLKFRGLERELVQEAEAGDIVLINGIEELGIGCTVCAPDAQEALPMLKVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 308 TMNFCVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-KDTGDDTVFEVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EP+E L VD+E+ +QG +M++L R G+L
Sbjct: 367 TILVENMRREGYELAVSRPRVVFKEIDGVKCEPFERLTVDVEDSHQGGVMEELGRRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++Y+P + DLG+R
Sbjct: 427 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYSPV---KEGDLGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 484 HNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 544 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEVTPKSIRLRKRHLKEHERKR 599
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 67 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 126
Query: 176 NKIDK 180
NK+D+
Sbjct: 127 NKVDR 131
>gi|163857442|ref|YP_001631740.1| GTP-binding elongation factor [Bordetella petrii DSM 12804]
gi|163261170|emb|CAP43472.1| GTP-binding elongation factor [Bordetella petrii]
Length = 607
Score = 867 bits (2241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/596 (67%), Positives = 508/596 (85%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQAVSERVMDSNDLEKERGITILAKNCAVEYQGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V++ATFDLFDKL ATEEQLDFPV+Y S L GYA ++ R+G+M PLFE
Sbjct: 129 KIDRPGARPDYVINATFDLFDKLGATEEQLDFPVVYASGLSGYAGLTAEVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP +D+ N PLQ+QIISL+Y+SY+GKIG+GRI GRI+ DVV GP+
Sbjct: 189 AILQHVPQREDDPNGPLQMQIISLDYNSYVGKIGVGRINRGRIRPGMDVVYQFGPEGASG 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ FKGL+R +V+EA +GDIVLI GIEEI IG T+ DP++P PML IDEPTL
Sbjct: 249 KGRINQVLKFKGLEREVVSEAEAGDIVLINGIEEIGIGCTVMDPAQPEAFPMLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+FK ++G EP+E L +D+E+ +QG +M++L R GDL
Sbjct: 368 TILLETMRREGYELAVSRPRVVFKDIDGVKCEPFEALTIDVEDAHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH+F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYLIPARGLIGFQNEFLTLTRGTGLMSHIFHEYAPVREGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G+AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGEAVAYALWKLQDRGRMFVSPGEALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEA++L+ PI+++LEYA+EFI+DDELVEITPK+IRLRKR L+E+ER++
Sbjct: 545 TNIRASGTDEAVRLVPPIQLSLEYAVEFIDDDELVEITPKSIRLRKRHLQEHERRR 600
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E +++ + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQAVSERVMDSNDLEKERGITILAKNCAVEYQG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|187928219|ref|YP_001898706.1| GTP-binding protein TypA [Ralstonia pickettii 12J]
gi|187725109|gb|ACD26274.1| GTP-binding protein TypA [Ralstonia pickettii 12J]
Length = 606
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/596 (67%), Positives = 498/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+N+ I R+MDSN+IEKERGITI +KNC++EYNGT
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNGT 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWV++ TFDLFDKL A ++QLDFPV+Y S L+GYA R+G+M PLFE
Sbjct: 128 KVDRPGARPEWVINQTFDLFDKLGANDDQLDFPVVYASGLNGYAGLTDDVREGDMKPLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL VP D+ N P QLQIISL+YSSY+GKIG+GRI GR++ LQDVV+ GP+ P
Sbjct: 188 TILDKVPQRNDDPNGPFQLQIISLDYSSYVGKIGVGRITRGRVRPLQDVVVKFGPEGNPI 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F+GL+R LV EA +GDIVLI GIEE+ IG T+C P LPML +DEPTL
Sbjct: 248 KGRINQVLKFRGLERELVQEAEAGDIVLINGIEELGIGCTVCAPDAQEALPMLKVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+I+EVSGRGELHL
Sbjct: 308 TMNFCVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-KDTGDDTIFEVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EP+E L VD+E+ +QG +M++L R G+L
Sbjct: 367 TILVENMRREGYELAVSRPRVVFKEIDGVKCEPFERLTVDVEDGHQGGVMEELGRRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++Y+P + DLG+R
Sbjct: 427 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYSPV---KEGDLGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 484 HNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 544 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEVTPKSIRLRKRHLKEHERKR 599
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 67 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 126
Query: 176 NKIDK 180
NK+D+
Sbjct: 127 NKVDR 131
>gi|309782254|ref|ZP_07676983.1| GTP-binding protein TypA/BipA [Ralstonia sp. 5_7_47FAA]
gi|404377948|ref|ZP_10983048.1| GTP-binding protein TypA/BipA [Ralstonia sp. 5_2_56FAA]
gi|308919025|gb|EFP64693.1| GTP-binding protein TypA/BipA [Ralstonia sp. 5_7_47FAA]
gi|348615879|gb|EGY65387.1| GTP-binding protein TypA/BipA [Ralstonia sp. 5_2_56FAA]
Length = 606
Score = 867 bits (2239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 498/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+N+ I R+MDSN+IEKERGITI +KNC++EYNGT
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNGT 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWV++ TFDLFDKL A ++QLDFPV+Y S L+GYA R+G+M PLFE
Sbjct: 128 KVDRPGARPEWVINQTFDLFDKLGANDDQLDFPVVYASGLNGYAGLTDDVREGDMKPLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL VP D+ N P QLQIISL+YSSY+GKIG+GRI GR++ LQDVV+ GP+ P
Sbjct: 188 TILDKVPQRNDDPNGPFQLQIISLDYSSYVGKIGVGRITRGRVRPLQDVVVKFGPEGNPI 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F+GL+R LV EA +GDIVLI GIEE+ IG T+C P LPML +DEPTL
Sbjct: 248 KGRINQVLKFRGLERELVQEAEAGDIVLINGIEELGIGCTVCAPDAQEALPMLKVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 308 TMNFCVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-KDTGDDTVFEVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EP+E L VD+E+ +QG +M++L R G+L
Sbjct: 367 TILVENMRREGYELAVSRPRVVFKEIDGVKCEPFERLTVDVEDGHQGGVMEELGRRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++Y+P + DLG+R
Sbjct: 427 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYSPV---KEGDLGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 484 HNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 544 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEVTPKSIRLRKRHLKEHERKR 599
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 67 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 126
Query: 176 NKIDK 180
NK+D+
Sbjct: 127 NKVDR 131
>gi|194289937|ref|YP_002005844.1| translational regulator, gtp-binding protein [Cupriavidus taiwanensis
LMG 19424]
gi|193223772|emb|CAQ69779.1| Translational regulator, GTP-binding protein [Cupriavidus taiwanensis
LMG 19424]
Length = 606
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/596 (68%), Positives = 494/596 (82%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR NQ + R+MDSN++EKERGITI +KNC++EYNGT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQAGTFRDNQQVAERVMDSNDLEKERGITILAKNCAVEYNGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ TFDLFDKL AT+EQLDFPVIY S L+GYA R G+M PLFE
Sbjct: 129 KIDRPGARPDWVINQTFDLFDKLGATDEQLDFPVIYASGLNGYAGLTEDVRDGDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+L VPV D+ + PLQLQIISL+YSSY+GKIG+GRI GR + LQDVV+ GP+ P
Sbjct: 189 TVLDKVPVRDDDRDGPLQLQIISLDYSSYVGKIGVGRISRGRARPLQDVVVKFGPEGNPI 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F+GL+R +V EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 249 KGRINQVLKFQGLEREIVQEAEAGDIVLINGIEELGIGCTVCAPEAQDALPMLKVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ++ RLD E+K+N+ LRV + DD+I+EVSGRGELHL
Sbjct: 309 TMNFCVNTSPLAGREGKFVTSRQLRERLDRELKSNVALRVA-DTGDDTIFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EPYE L VD+E+ +QG IM++L R G+L
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKCEPYELLTVDVEDSHQGGIMEELGRRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++YAP LG+R
Sbjct: 428 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYAPVREGG---LGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 HNGVLISQDDGDAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVELTPKSIRLRKRHLKEHERKR 600
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQAGTFRDNQQVAERVMDSNDLEKERGITILAKNCAVEYNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|113868269|ref|YP_726758.1| GTP-binding elongation factor family protein [Ralstonia eutropha H16]
gi|113527045|emb|CAJ93390.1| GTP-binding elongation factor family protein [Ralstonia eutropha H16]
Length = 606
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/596 (67%), Positives = 495/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR NQ + R+MDSN++EKERGITI +KNC++EYNGT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQAGTFRDNQQVAERVMDSNDLEKERGITILAKNCAVEYNGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ TFDLFDKL AT+EQLDFPVIY S L+G+A R G+M PLFE
Sbjct: 129 KIDRPGARPDWVINQTFDLFDKLGATDEQLDFPVIYASGLNGFAGLTEDVRDGDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+L VPV D+ + PLQLQIISL+YSSY+GKIG+GRI GR + LQDVV+ GP+ P
Sbjct: 189 TVLDKVPVRDDDRDGPLQLQIISLDYSSYVGKIGVGRISRGRARPLQDVVVKFGPEGNPI 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F+GL+R +V+EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 249 KGRINQVLKFQGLEREIVSEAEAGDIVLINGIEELGIGCTVCAPEAQDALPMLKVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ++ RLD E+K+N+ LRV + DD+I+EVSGRGELHL
Sbjct: 309 TMNFCVNTSPLAGREGKFVTSRQLRERLDRELKSNVALRVA-DTGDDTIFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EPYE L VD+E+ +QG +M++L R G+L
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKCEPYELLTVDVEDSHQGGVMEELGRRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++YAP LG+R
Sbjct: 428 LDMASDGKGRTRLEYRIPARGLIGFQGEFMTLTRGTGLISHIFDDYAPVREGG---LGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 HNGVLISQDDGDAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVELTPKSIRLRKRHLKEHERKR 600
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQAGTFRDNQQVAERVMDSNDLEKERGITILAKNCAVEYNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|73541709|ref|YP_296229.1| GTP-binding protein TypA [Ralstonia eutropha JMP134]
gi|72119122|gb|AAZ61385.1| Small GTP-binding protein domain:GTP-binding protein TypA [Ralstonia
eutropha JMP134]
Length = 606
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/596 (67%), Positives = 495/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR NQ + R+MDSN++EKERGITI +KNC++EYNGT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQAGTFRDNQQVAERVMDSNDLEKERGITILAKNCAVEYNGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ TFDLFDKL AT+EQLDFPVIY S L+G+A R G+M PLFE
Sbjct: 129 KIDRPGARPDWVINQTFDLFDKLGATDEQLDFPVIYASGLNGFAGLTEDVRDGDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+L VPV D+ + PLQLQIISL+YSSY+GKIG+GRI GR + LQDVV+ GP+ P
Sbjct: 189 TVLDKVPVRDDDRDGPLQLQIISLDYSSYVGKIGVGRISRGRARPLQDVVVKFGPEGNPI 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F+GL+R +V+EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 249 KGRINQVLKFQGLEREIVSEAEAGDIVLINGIEELGIGCTVCAPDAQDALPMLKVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ++ RLD E+K+N+ LRV + DD+I+EVSGRGELHL
Sbjct: 309 TMNFCVNTSPLAGREGKFVTSRQLRERLDRELKSNVALRVN-DTGDDTIFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EPYE L VD+E+ +QG +M++L R G+L
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKNEPYELLTVDVEDSHQGGVMEELGRRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++YAP LG+R
Sbjct: 428 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYAPVREGG---LGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 HNGVLISQDDGDAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVELTPKSIRLRKRHLKEHERKR 600
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQAGTFRDNQQVAERVMDSNDLEKERGITILAKNCAVEYNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|17546015|ref|NP_519417.1| GTP-binding elongation factor protein [Ralstonia solanacearum
GMI1000]
gi|17428310|emb|CAD14998.1| putative gtpase typa-related protein [Ralstonia solanacearum GMI1000]
Length = 606
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/596 (67%), Positives = 498/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+N+ I R+MDSN+IEKERGITI +KNC++EYNGT
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNGT 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWV++ TFDLFDKL A ++QLDFPV+Y S L+GYA R G+M PLFE
Sbjct: 128 KVDRPGARPEWVINQTFDLFDKLGANDDQLDFPVVYASGLNGYAGLTDDVRSGDMKPLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL VP D+ N QLQIISL+YSSY+GKIG+GRI GR++ LQDVV+ GP+ P
Sbjct: 188 TILDKVPQRNDDPNGSFQLQIISLDYSSYVGKIGVGRITRGRVRPLQDVVVKFGPEGAPI 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K ++NQ+ F+GL+R LV EA +GDIVLI GI+E+ IG T+C P + LPML +DEPTL
Sbjct: 248 KGRVNQVLKFRGLERELVQEAEAGDIVLINGIDELGIGCTVCAPDAQDALPMLKVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+I+EVSGRGELHL
Sbjct: 308 TMNFCVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-KDTGDDTIFEVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G +EP+E L VD+E+ +QG +M++L R G+L
Sbjct: 367 TILVENMRREGYELAVSRPRVVFKEIDGVKHEPFERLTVDVEDGHQGGVMEELGRRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++Y+P + DLG+R
Sbjct: 427 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYSPV---KEGDLGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 484 HNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 544 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEVTPKSIRLRKRHLKEHERKR 599
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 67 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 126
Query: 176 NKIDK 180
NK+D+
Sbjct: 127 NKVDR 131
>gi|299067348|emb|CBJ38545.1| Translational regulator, GTP-binding protein [Ralstonia solanacearum
CMR15]
Length = 606
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/596 (67%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+N+ I R+MDSN+IEKERGITI +KNC++EYNGT
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNGT 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWV++ TFDLFDKL A ++QLDFPV+Y S L+GYA R+G+M PLFE
Sbjct: 128 KVDRPGARPEWVINQTFDLFDKLGANDDQLDFPVVYASGLNGYAGLTDDVREGDMKPLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL VP D+ N QLQIISL+YSSY+GKIG+GRI GR++ LQDVV+ GP+ P
Sbjct: 188 TILDKVPQRNDDPNGSFQLQIISLDYSSYVGKIGVGRITRGRVRPLQDVVVKFGPEGAPI 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K ++NQ+ F+GL+R LV EA +GDIVLI GI+E+ IG T+C P + LPML +DEPTL
Sbjct: 248 KGRVNQVLKFRGLERELVQEAEAGDIVLINGIDELGIGCTVCAPDAQDALPMLKVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+I+EVSGRGELHL
Sbjct: 308 TMNFCVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-KDTGDDTIFEVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G +EP+E L VD+E+ +QG +M++L R G+L
Sbjct: 367 TILVENMRREGYELAVSRPRVVFKEIDGVKHEPFERLTVDVEDGHQGGVMEELGRRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++Y+P + DLG+R
Sbjct: 427 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYSPV---REGDLGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 484 HNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 544 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEVTPKSIRLRKRHLKEHERKR 599
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQAGTFRENEQIAERVMDSNDIEKERGITILAKNCAVEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 67 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 126
Query: 176 NKIDK 180
NK+D+
Sbjct: 127 NKVDR 131
>gi|339326325|ref|YP_004686018.1| GTP-binding protein TypA [Cupriavidus necator N-1]
gi|338166482|gb|AEI77537.1| GTP-binding protein TypA/BipA [Cupriavidus necator N-1]
Length = 622
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/596 (67%), Positives = 494/596 (82%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR NQ + R+MDSN++EKERGITI +KNC++EYNGT
Sbjct: 25 AIIAHVDHGKTTLVDQLLRQAGTFRDNQQVAERVMDSNDLEKERGITILAKNCAVEYNGT 84
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 85 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVVN 144
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARPEWV++ TFDLFDKL A++EQLDFPVIY S L+G+A R G+M PLFE
Sbjct: 145 KIDRPGARPEWVINQTFDLFDKLGASDEQLDFPVIYASGLNGFAGLTEDVRGGDMKPLFE 204
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+L VPV D+ + PLQLQIISL+YSSY+GKIG+GRI GR + LQDVV+ GP+ P
Sbjct: 205 TVLDKVPVRDDDRDGPLQLQIISLDYSSYVGKIGVGRISRGRARPLQDVVVKFGPEGNPI 264
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F+GL+R +V EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 265 KGRINQVLKFQGLEREIVPEAEAGDIVLINGIEELGIGCTVCAPDAQDALPMLKVDEPTL 324
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ++ RLD E+K+N+ LRV + DD+I+EVSGRGELHL
Sbjct: 325 TMNFCVNTSPLAGREGKFVTSRQLRERLDRELKSNVALRVA-DTGDDTIFEVSGRGELHL 383
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EPYE L VD+E+ +QG +M++L R G+L
Sbjct: 384 TILLENMRREGYELAVSRPRVVFKEIDGVKNEPYELLTVDVEDSHQGGVMEELGRRKGEL 443
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++YAP LG+R
Sbjct: 444 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYAPVREGG---LGER 500
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 501 HNGVLISQDDGDAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 560
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVE+TPK+IRLRKR LKE+ERK+
Sbjct: 561 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVELTPKSIRLRKRHLKEHERKR 616
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + + + + N + IT L
Sbjct: 24 IAIIAHVDHGKTTLVDQLLRQAGTFRDNQQVAERVMDSNDLEKERGITILAKNCAVEYNG 83
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 84 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVV 143
Query: 176 NKIDK 180
NKID+
Sbjct: 144 NKIDR 148
>gi|393778285|ref|ZP_10366564.1| translational regulator, gtp-binding protein [Ralstonia sp. PBA]
gi|392714751|gb|EIZ02346.1| translational regulator, gtp-binding protein [Ralstonia sp. PBA]
Length = 607
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/596 (67%), Positives = 496/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR N+ + R+MDSN+IEKERGITI +KNC++EYNGT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQAGTFRANEQVAERVMDSNDIEKERGITILAKNCAVEYNGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV++ TFDLFDKL AT+EQLDFPV+Y S L+GYA R G+M PLF+
Sbjct: 129 KVDRPGARPDWVINQTFDLFDKLGATDEQLDFPVVYASGLNGYAGLTDDVRSGDMKPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+L VPV D+ + PLQ+QIISL+YSSY+GKIG+GRI GR++ LQDV++ GP+ P
Sbjct: 189 TVLDKVPVRDDDPDGPLQMQIISLDYSSYVGKIGVGRISRGRVRPLQDVIVKFGPEGAPI 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F+GL+R +V+EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 249 KGRINQVLKFRGLEREVVSEAEAGDIVLINGIEELGIGCTVCAPEAQDALPMLKVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQI+ RLD E+K+N+ LRV + DD+++EVSGRGELHL
Sbjct: 309 TMNFCVNTSPLAGREGKFVTSRQIRERLDRELKSNVALRVA-DTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ K ++G +EPYE L VD+E+ +QG IM++L R G+L
Sbjct: 368 TILLENMRREGYELAVSRPRVVIKEIDGVKHEPYELLTVDVEDSHQGGIMEELGRRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++YAP +G+R
Sbjct: 428 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYAPLREGG---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 HNGVLISQDDGDAVAYALWKLQDRGRMFVKPGDPLYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVEITPK+IRLRKR LKE+ERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEITPKSIRLRKRHLKEHERKR 600
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQAGTFRANEQVAERVMDSNDIEKERGITILAKNCAVEYNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|430809586|ref|ZP_19436701.1| GTP-binding protein [Cupriavidus sp. HMR-1]
gi|429497947|gb|EKZ96464.1| GTP-binding protein [Cupriavidus sp. HMR-1]
Length = 607
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/596 (67%), Positives = 493/596 (82%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+NQ I R+MDSN++EKERGITI +KNC++EYNGT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQAGTFRENQQIAERVMDSNDLEKERGITILAKNCAVEYNGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV++ TFDLFDKL A +EQLDF V+Y S L+GYA R G+M PLFE
Sbjct: 129 KVDRPGARPDWVINQTFDLFDKLGANDEQLDFTVVYASGLNGYAGLTEDVRDGDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+L VPV D+ N PLQ+QIISL+YSSY+GKIG+GRI GR K LQDVV+ GP+ P
Sbjct: 189 TVLDKVPVRNDDPNGPLQMQIISLDYSSYVGKIGVGRISRGRAKPLQDVVVKFGPEGNPI 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F GL+R +V+EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 249 KGRINQVLKFSGLEREIVDEAEAGDIVLINGIEELGIGCTVCAPEAQDALPMLKVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ++ RLD E+K+N+ LRV + DD+I+EVSGRGELHL
Sbjct: 309 TMNFCVNTSPLAGREGKFVTSRQLRERLDRELKSNVALRVAETG-DDTIFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EPYE L VD+E+ +QG +M++L R G+L
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKNEPYELLTVDVEDGHQGSVMEELGRRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++YAP LG+R
Sbjct: 428 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYAPVREGG---LGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 HNGVLISQDDGDAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVEITPK+IRLRKR LKE+ERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEITPKSIRLRKRHLKEHERKR 600
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQAGTFRENQQIAERVMDSNDLEKERGITILAKNCAVEYNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|145589406|ref|YP_001156003.1| GTP-binding protein TypA [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047812|gb|ABP34439.1| GTP-binding protein TypA [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 605
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/596 (66%), Positives = 498/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR N+ + R+MDSN++EKERGITI SKNC++EY+GT
Sbjct: 10 AIIAHVDHGKTTLVDQLLRQSGTFRSNEKMTERVMDSNDLEKERGITILSKNCAVEYDGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V++ATF+LFDKL ATEEQLDFP+IY S L+GYA R+G+M PLF+
Sbjct: 130 KVDRPGARCDYVINATFELFDKLGATEEQLDFPIIYASGLNGYAGLTEDVREGDMRPLFD 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+L++VPV D+ + PLQ QI S++Y+SY+GKIG+GRI GR+KS +VV MNGPD P
Sbjct: 190 AVLEHVPVRDDDPDGPLQFQISSIDYNSYVGKIGVGRISRGRVKSGMEVVCMNGPDGVPF 249
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ FKGL+R +V+EA++GDI LI GIEE+ IG+T+C KP+ LPML IDEPTL
Sbjct: 250 KGRINQVLKFKGLEREIVDEAVAGDIALINGIEELAIGTTVCAVDKPDPLPMLKIDEPTL 309
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQI+ RLD E+K N+ LRV + DD+++EVSGRGELHL
Sbjct: 310 TMNFMVNTSPLAGREGKFVTSRQIRERLDRELKANMALRVRETD-DDTVFEVSGRGELHL 368
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYE++VSRPRV+F NG EPYENL VD+E+ QG +M+ L R G+L
Sbjct: 369 TILVETMRREGYEMAVSRPRVVFHEENGVKMEPYENLTVDVEDATQGSVMEDLGKRKGEL 428
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K R RLEYRIP+RGLIGFQ +F+T+TRG GL+SH F+ YAP + LG+R
Sbjct: 429 QDMVSDGKGRTRLEYRIPARGLIGFQGDFMTMTRGNGLMSHTFDSYAPAKDGI---LGER 485
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G+AVAY++WKLQDRGR+F+ H D VYEGM+IGIHSRDNDL+VNPIK KQL
Sbjct: 486 HNGVLISQDDGEAVAYAIWKLQDRGRMFVKHGDPVYEGMVIGIHSRDNDLVVNPIKGKQL 545
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L++PI +TLEYA+EFI+DDELVE+TPK++R+RKR LKE++RKK
Sbjct: 546 TNVRSSGTDEAVRLVTPIDLTLEYAVEFISDDELVEVTPKSVRIRKRHLKEHDRKK 601
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F +T+ + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDQLLRQSGTFRSNEKMTERVMDSNDLEKERGITILSKNCAVEYDG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 128
Query: 176 NKIDKLDINLDRI 188
NK+D+ D +
Sbjct: 129 NKVDRPGARCDYV 141
>gi|456062948|ref|YP_007501918.1| GTP-binding protein TypA [beta proteobacterium CB]
gi|455440245|gb|AGG33183.1| GTP-binding protein TypA [beta proteobacterium CB]
Length = 605
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/596 (66%), Positives = 496/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR N+ + R+MDSN++EKERGITI SKNC++EY+GT
Sbjct: 10 AIIAHVDHGKTTLVDQLLRQSGTFRSNEKMTERVMDSNDLEKERGITILSKNCAVEYDGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V++ATF+LFDKL ATEEQLDFPVIY S L+GYA R+G+M PLF+
Sbjct: 130 KVDRPGARCDYVINATFELFDKLGATEEQLDFPVIYASGLNGYAGLTDDVREGDMRPLFD 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+LK VPV DN PLQLQI S+EYS+Y+GKIG+GRI G +K L DVV ++GP+ P
Sbjct: 190 AVLKNVPVRDDNPEGPLQLQITSIEYSTYVGKIGVGRINRGTVKPLMDVVYIDGPEGTPR 249
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F+GL+R LV+EA +GDIVL+ GIE++ IG+TIC P P LPML IDEPTL
Sbjct: 250 KGRINQVLKFRGLERELVDEAQAGDIVLVNGIEDLAIGTTICAPDVPEALPMLKIDEPTL 309
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQI+ RLD E+K+N+ LRV + DD+++EVSGRGELHL
Sbjct: 310 TMNFMVNTSPLAGREGKFVTSRQIRERLDRELKSNMALRVKET-DDDTVFEVSGRGELHL 368
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+F ++G EPYENL VD+E+ QG +M+ L R G+L
Sbjct: 369 TILVETMRREGYELAVSRPRVVFHEVDGVKMEPYENLTVDVEDTTQGAVMEDLGKRKGEL 428
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ +F+T+TRG GL+SH F+ YAP + LG+R
Sbjct: 429 LDMVSDGKGRTRLEYRIPARGLIGFQGDFMTMTRGNGLMSHTFDSYAPAKDGI---LGER 485
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G+AVAY+LWKLQDRGR+F++ D +YEGM+IGIHSRDNDL+VNPIK KQL
Sbjct: 486 HNGVLISQDDGEAVAYALWKLQDRGRMFVSPGDPLYEGMVIGIHSRDNDLVVNPIKGKQL 545
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L++PI + LEYA+EFI+DDELVE+TPK+IR+RKR+LKE+ERKK
Sbjct: 546 TNVRASGTDEAVRLVTPIAMNLEYAVEFIDDDELVEVTPKSIRIRKRYLKEHERKK 601
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F +T+ + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDQLLRQSGTFRSNEKMTERVMDSNDLEKERGITILSKNCAVEYDG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 128
Query: 176 NKIDKLDINLDRI 188
NK+D+ D +
Sbjct: 129 NKVDRPGARCDYV 141
>gi|94310962|ref|YP_584172.1| GTP-binding protein [Cupriavidus metallidurans CH34]
gi|93354814|gb|ABF08903.1| GTP-binding protein [Cupriavidus metallidurans CH34]
Length = 607
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/596 (67%), Positives = 492/596 (82%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+NQ I R+MDSN++EKERGITI +KNC++EYNGT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQAGTFRENQQIAERVMDSNDLEKERGITILAKNCAVEYNGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV++ TFDLFDKL A +EQLDF V+Y S L+GYA R G+M PLFE
Sbjct: 129 KVDRPGARPDWVINQTFDLFDKLGANDEQLDFTVVYASGLNGYAGLTEDVRDGDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+L VPV D+ N PLQ+QIISL+YSSY+GKIG+GRI GR K LQDVV+ GP+ P
Sbjct: 189 TVLDKVPVRNDDPNGPLQMQIISLDYSSYVGKIGVGRISRGRAKPLQDVVVKFGPEGNPI 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F GL+R +V EA +GDIVLI GIEE+ IG T+C P + LPML +DEPTL
Sbjct: 249 KGRINQVLKFSGLEREIVAEAEAGDIVLINGIEELGIGCTVCAPEALDALPMLKVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ++ RLD E+K+N+ LRV + DD+I+EVSGRGELHL
Sbjct: 309 TMNFCVNTSPLAGREGKFVTSRQLRERLDRELKSNVALRVAETG-DDTIFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EPYE L VD+E+ +QG +M++L R G+L
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKNEPYELLTVDVEDGHQGSVMEELGRRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGLISH+F++YAP LG+R
Sbjct: 428 LDMASDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLISHIFDDYAPVREGG---LGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 HNGVLISQDDGDAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI DDELVEITPK+IRLRKR LKE+ERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIADDELVEITPKSIRLRKRHLKEHERKR 600
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQAGTFRENQQIAERVMDSNDLEKERGITILAKNCAVEYNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|359798521|ref|ZP_09301092.1| GTP-binding protein TYPA/BIPA [Achromobacter arsenitoxydans SY8]
gi|359363343|gb|EHK65069.1| GTP-binding protein TYPA/BIPA [Achromobacter arsenitoxydans SY8]
Length = 607
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/596 (67%), Positives = 502/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP++V++ATFDLFDKL AT+EQLDFPV+Y S L GYA R+G+M PLFE
Sbjct: 129 KVDRPGARPDFVINATFDLFDKLGATDEQLDFPVVYASGLSGYAGLTPDVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP D+ N PLQ+QIISL+Y+SY+GKIG+GRI GR++ +V GPD +
Sbjct: 189 AILQHVPQRDDDPNGPLQMQIISLDYNSYVGKIGVGRINRGRMRPGMEVAYKFGPDGQGG 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+R++VNEA +GDIVLI GIEE+ IG T+ DP + LPML IDEPTL
Sbjct: 249 RGRINQVLKFHGLERIVVNEAEAGDIVLINGIEELGIGCTVTDPVNQDPLPMLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQVRDRLDRELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+FK ++G EP+E+L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILLETMRREGYELAVSRPRVVFKEIDGVKCEPFESLTVDVEDAHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH+F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYLIPARGLIGFQNEFLTLTRGTGLMSHIFHEYAPIKEGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F+N D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGDAVAYALWKLQDRGRMFVNPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVEITPK+IRLRKR L ENERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEITPKSIRLRKRHLLENERKR 600
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E +T+ + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|393759242|ref|ZP_10348058.1| GTP-binding elongation factor [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|393162470|gb|EJC62528.1| GTP-binding elongation factor [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
Length = 605
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/596 (66%), Positives = 501/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR N++I+ R+MDS +IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQAGTFRDNEHISERVMDSGDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL+LG +PIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALELGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP++ ++ATFDLFDKL AT+EQLDFP+IY S L GYA R+G+M PLF+
Sbjct: 129 KVDRPGARPDYAINATFDLFDKLGATDEQLDFPIIYASGLSGYAGLTEDVREGDMRPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP +D+ N PLQLQI SL+YSSY+GKIG+GR+ GR+++ QDVV+ GPD +
Sbjct: 189 AILQHVPQREDDVNAPLQLQICSLDYSSYVGKIGVGRVNRGRVRAAQDVVVKFGPDGEVI 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ FKGL+RV V+EA +GDIVLI GIEE+ IG T+ DP+ P LP+L IDEPTL
Sbjct: 249 KGRINQVLKFKGLERVSVDEAEAGDIVLINGIEELGIGCTVTDPAHPEALPLLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV + DD+++EV GRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRVNETD-DDTVFEVCGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYE++VSRPRV+ + NG EPYE L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILIENMRREGYEMAVSRPRVLIREENGVKMEPYEQLTVDVEDGHQGGVMEELGRRRGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + + R RLEYRIP+RGLIGFQ EF+TLTRGTGL+SH F+E+ P + +G+R
Sbjct: 428 QDMVADGRGRTRLEYRIPARGLIGFQGEFMTLTRGTGLMSHTFDEFRPMREGT---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIKEK+L
Sbjct: 485 RNGVLISQDDGDAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKEKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG DE I L+ PI++TLEYA++F++DDELVE+TPK+IRLRKR+LKE+ER++
Sbjct: 545 TNVRASGKDEHIDLVPPIRLTLEYAVDFLDDDELVEVTPKSIRLRKRYLKEHERRR 600
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + F + I++ + + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQAGTFRDNEHISERVMDSGDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALELGLRPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|311104991|ref|YP_003977844.1| GTP-binding protein TYPA/BIPA [Achromobacter xylosoxidans A8]
gi|310759680|gb|ADP15129.1| GTP-binding protein TYPA/BIPA [Achromobacter xylosoxidans A8]
Length = 607
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/596 (67%), Positives = 503/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V++ATFDLFDKL AT+EQLDFPVIY S L GYA + R+GNM PLFE
Sbjct: 129 KVDRPGARTDFVINATFDLFDKLGATDEQLDFPVIYASGLSGYAGLTADVREGNMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP +D+ N PLQ+QIISL+Y+SY+GKIG+GRI GR++ +V GP+ +
Sbjct: 189 AILEHVPQREDDPNGPLQMQIISLDYNSYVGKIGVGRINRGRMRPGMEVAYKFGPEGQGG 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+R++V+EA +GDIVLI GIEE+ IG T+ D + + LPML IDEPTL
Sbjct: 249 RGRINQVLKFHGLERIVVDEAEAGDIVLINGIEELGIGCTVTDTATQDALPMLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+FK ++G EP+E+L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILLETMRREGYELAVSRPRVVFKDIDGVKCEPFESLTVDVEDAHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH+F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYLIPARGLIGFQNEFLTLTRGTGLMSHIFHEYAPIKEGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDQGDAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVEITPK+IRLRKRFL ENERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEITPKSIRLRKRFLLENERKR 600
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E +T+ + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|293604241|ref|ZP_06686649.1| glutathione-disulfide reductase [Achromobacter piechaudii ATCC 43553]
gi|292817466|gb|EFF76539.1| glutathione-disulfide reductase [Achromobacter piechaudii ATCC 43553]
Length = 607
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/596 (66%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V++ATFDLFDKL ATEEQLDFPV+Y S L GYA R+GNM PLFE
Sbjct: 129 KVDRPGARTDFVINATFDLFDKLGATEEQLDFPVVYASGLSGYAGLTPDVREGNMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP D+ N PLQ+QIISL+Y+SY+GKIG+GRI GR++ +V GPD +
Sbjct: 189 AILQHVPQRDDDPNGPLQMQIISLDYNSYVGKIGVGRINRGRMRPGMEVAYKFGPDGQSG 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ++ F GL+RV+V+EA +GDIVLI GIEE+ IG T+ D LPML IDEPTL
Sbjct: 249 RGRINQVQKFHGLERVVVDEAEAGDIVLINGIEELGIGCTVTDVVTQEALPMLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQVRDRLDRELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+FK ++G EP+E+L +D+E+ +QG +M++L R GDL
Sbjct: 368 TILLETMRREGYELAVSRPRVVFKEIDGVKCEPFESLTIDVEDAHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH+F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYLIPARGLIGFQNEFLTLTRGTGLMSHIFHEYAPVKEGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDQGDAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVEITPK+IRLRKR L ENERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEITPKSIRLRKRHLLENERKR 600
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E +T+ + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|421484084|ref|ZP_15931656.1| GTP-binding protein TYPA/BIPA [Achromobacter piechaudii HLE]
gi|400197791|gb|EJO30755.1| GTP-binding protein TYPA/BIPA [Achromobacter piechaudii HLE]
Length = 607
Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/596 (66%), Positives = 501/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V++ATFDLFDKL ATEEQLDFPV+Y S L GYA R+GNM PLFE
Sbjct: 129 KVDRPGARTDFVINATFDLFDKLGATEEQLDFPVVYASGLSGYAGLTPDVREGNMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP D+ N PLQ+QIISL+Y+SY+GKIG+GRI GR++ +V GP+ +
Sbjct: 189 AILQHVPQRDDDPNGPLQMQIISLDYNSYVGKIGVGRINRGRMRPGMEVAYKFGPEGQGG 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+R++V+EA +GDIVLI GIEE+ IG T+ D + LPML IDEPTL
Sbjct: 249 RGRINQVLKFHGLERIVVDEAEAGDIVLINGIEELGIGCTVTDAATQEALPMLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQVRDRLDRELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+FK ++G EP+E+L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILLETMRREGYELAVSRPRVVFKDIDGVKCEPFESLTVDVEDAHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH+F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYLIPARGLIGFQNEFLTLTRGTGLMSHIFHEYAPVKEGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGDAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVEITPK+IRLRKR+L ENERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEITPKSIRLRKRYLLENERKR 600
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E +T+ + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|312796197|ref|YP_004029119.1| GTP-binding protein TypA/BipA [Burkholderia rhizoxinica HKI 454]
gi|312167972|emb|CBW74975.1| GTP-binding protein TypA/BipA [Burkholderia rhizoxinica HKI 454]
Length = 608
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/592 (66%), Positives = 504/592 (85%), Gaps = 4/592 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVVERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ TFDLFDKL A +EQLDFPV+Y SAL+GYA+ +++ R+G+M PLFE
Sbjct: 129 KIDRPGARPDWVINQTFDLFDKLGANDEQLDFPVVYASALNGYASLDAQVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+L+YVPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK+ Q VV+ GP +P
Sbjct: 189 AVLQYVPVRAADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKAGQPVVMRFGPQGEPL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ++VFKGL+RV V+ A +GDIVLI GI+++ IG+TIC P P+ LPM+ +DEPTL
Sbjct: 249 NRKINQVQVFKGLERVQVDSAEAGDIVLINGIDDVGIGATICAPDVPDALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKFIT+RQI+ RL+ E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFCVNTSPLAGREGKFITSRQIRERLNRELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G+L
Sbjct: 368 TILIENMRREGYELAVSRPRVVVREIDGVRHEPYELLTVDLEDGHQGAVMEELGRRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ+EF+TLTRGTGL+SH+F+ Y P + + +G+R
Sbjct: 428 LDMASDGRGRTRLEYRIPARGLIGFQSEFLTLTRGTGLMSHIFDAYQPMRDGT---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPI+ KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIRGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKEN 1517
TN+R+SG+DEA++L+ PI++TLEYA+EFI+DDELVE+TP++IRLRKR LKE+
Sbjct: 545 TNVRASGTDEAVRLVPPIQLTLEYAVEFIDDDELVEVTPQSIRLRKRHLKEH 596
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVVERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|423016448|ref|ZP_17007169.1| GTP-binding protein TYPA/BIPA [Achromobacter xylosoxidans AXX-A]
gi|338780525|gb|EGP44932.1| GTP-binding protein TYPA/BIPA [Achromobacter xylosoxidans AXX-A]
Length = 607
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/596 (66%), Positives = 502/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V++ATFDLFDKL AT+EQLDFPV+Y S L GYA + R+G+M PLFE
Sbjct: 129 KVDRPGARTDFVINATFDLFDKLGATDEQLDFPVVYASGLSGYAGLTADVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP D+ N PLQ+QIISL+Y+SY+GKIG+GRI GR++ DV GPD +
Sbjct: 189 AILQHVPQRDDDPNGPLQMQIISLDYNSYVGKIGVGRINRGRMRPGMDVAYKFGPDGQGG 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+R++V+EA +GDIVLI GIE++ IG T+ DP LPML IDEPTL
Sbjct: 249 RGRINQVLKFHGLERIVVDEAEAGDIVLINGIEDLGIGCTVTDPVTQEVLPMLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+FK ++G EP+E+L +D+E+ +QG +M++L R GDL
Sbjct: 368 TILLETMRREGYELAVSRPRVVFKEVDGVKCEPFESLTIDVEDAHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH+F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYLIPARGLIGFQNEFLTLTRGTGLMSHIFHEYAPIKEGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F+N D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGDAVAYALWKLQDRGRMFVNPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVEITPK+IRLRKR L+EN+RK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEITPKSIRLRKRHLQENDRKR 600
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E +T+ + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|424776848|ref|ZP_18203823.1| GTP-binding elongation factor [Alcaligenes sp. HPC1271]
gi|422887888|gb|EKU30282.1| GTP-binding elongation factor [Alcaligenes sp. HPC1271]
Length = 605
Score = 854 bits (2207), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/596 (66%), Positives = 500/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR N++I+ R+MDS +IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQAGTFRDNEHISERVMDSGDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL+LG +PIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALELGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP++ ++ATFDLFDKL AT+EQLDFP+IY S L GYA R+G+M PLF+
Sbjct: 129 KVDRPGARPDFAINATFDLFDKLGATDEQLDFPIIYASGLSGYAGLTEDVREGDMRPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP +D+ N PLQLQI SL+YSSY+GKIG+GR+ GR+++ QDVV+ GPD +
Sbjct: 189 AILEHVPQREDDVNAPLQLQICSLDYSSYVGKIGVGRVNRGRVRAAQDVVVKFGPDGEVI 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ FKGL+RV V+EA +GDIVLI GIEE+ IG T+ DP+ LP+L IDEPTL
Sbjct: 249 KGRINQVLKFKGLERVSVDEAEAGDIVLINGIEELGIGCTVTDPAHQEALPLLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV + DD+++EV GRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRVNETD-DDTVFEVCGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYE++VSRPRV+ + NG EPYE L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILIENMRREGYEMAVSRPRVLIREENGVKMEPYEQLTVDVEDGHQGGVMEELGRRRGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + + R RLEYRIP+RGLIGFQ EF+TLTRGTGL+SH F+E+ P + +G+R
Sbjct: 428 QDMVADGRGRTRLEYRIPARGLIGFQGEFMTLTRGTGLMSHTFDEFRPMREGT---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIKEK+L
Sbjct: 485 RNGVLISQDDGDAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKEKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG DE I L+ PI++TLEYA++F++DDELVE+TPK+IRLRKR+LKE+ER++
Sbjct: 545 TNVRASGKDEHIDLVPPIRLTLEYAVDFLDDDELVEVTPKSIRLRKRYLKEHERRR 600
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + F + I++ + + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQAGTFRDNEHISERVMDSGDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALELGLRPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|149926268|ref|ZP_01914530.1| GTP-binding elongation factor family protein [Limnobacter sp. MED105]
gi|149825086|gb|EDM84298.1| GTP-binding elongation factor family protein [Limnobacter sp. MED105]
Length = 606
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/596 (67%), Positives = 491/596 (82%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+N+ + R+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENEKLEERVMDSNDIEKERGITILSKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR EWV+D TFDLFDKL AT+EQLDFP++Y S L+GYA + R+G M PLFE
Sbjct: 129 KVDRPGARVEWVIDQTFDLFDKLGATDEQLDFPIVYASGLNGYAGDTPDVREGTMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILKYVPV D+ N PLQ QI SL+Y+SY+GKIGIGRI G ++ Q V +NGPD P
Sbjct: 189 AILKYVPVRDDDPNGPLQFQITSLDYNSYVGKIGIGRIKRGTVRVGQQVTCINGPDGTPF 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+INQ+ F+GL+R+ EA +GDI LI GIEEI IG+TIC P GL + IDEPTL
Sbjct: 249 NGRINQVLKFRGLERIQEEEAQAGDICLINGIEEIGIGTTICAPDCVEGLEIPAIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RL E+K N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLQRELKANVALRV-KDTDDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G EPYE L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKCEPYEMLTVDVEDSHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVRLEY+IP+RGLIGFQ +F+TLTRGTGLISHVF++YAP +R
Sbjct: 428 LDMSPDGKGRVRLEYKIPARGLIGFQGDFMTLTRGTGLISHVFDQYAPVREGGS---AER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G AVAY+LWKLQDRGR+F++ + +YEGM+IGIHSRDNDL+VNPIK KQL
Sbjct: 485 HNGVLISQDDGDAVAYALWKLQDRGRMFVSPGEALYEGMVIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L+ PI++ LEYA+EFI +DELVEITPKNIR+RKRFLKE+ERK+
Sbjct: 545 TNVRSSGTDEAVRLVPPIQMNLEYAVEFIAEDELVEITPKNIRIRKRFLKEHERKR 600
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENEKLEERVMDSNDIEKERGITILSKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|378823633|ref|ZP_09846243.1| GTP-binding protein TypA [Sutterella parvirubra YIT 11816]
gi|378597553|gb|EHY30831.1| GTP-binding protein TypA [Sutterella parvirubra YIT 11816]
Length = 614
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/600 (66%), Positives = 503/600 (83%), Gaps = 8/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL+ +GTFR NQ + R+MDSN++E+ERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTMVDRLLQSAGTFRANQQVAERVMDSNDLERERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL G KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALAQGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQ----GNMI 1101
KIDR ARP+WVV+ TFDLFDKL ATE+QLDFPVIY SAL GYA E + + GNM
Sbjct: 129 KIDRPGARPDWVVNQTFDLFDKLGATEDQLDFPVIYASALSGYAGETTDVEELKAIGNMR 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
+F+AILKYVPV D+ + PLQLQI SL+YSSY+GKIG+GR+ GRI+ +V IMNGP+
Sbjct: 189 AVFDAILKYVPVRDDDPDGPLQLQICSLDYSSYVGKIGVGRVHRGRIRPNMEVAIMNGPE 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
D P +AKINQ+ F+GLDR+LV+EA +GDIVL+ GIEE+ IG+TI D P LPML +D
Sbjct: 249 DTPKRAKINQVLKFEGLDRMLVDEAEAGDIVLVNGIEELAIGTTITDTQSPEALPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN+SPLAGREGKF+T+RQI+ RL+ E+K+N+ +RV K D++++EV+GRG
Sbjct: 309 EPTLTMNFQVNSSPLAGREGKFVTSRQIRERLERELKSNVAMRVRPTK-DETVWEVAGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VSRPRV+ K ++G EPYE L VD+EE +QG +M++L R
Sbjct: 368 ELHLTILLENMRREGYELAVSRPRVLLKEIDGVKMEPYELLTVDVEEEHQGGVMEELGRR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
GDL++++ + K RVRLEYRIP+RGLIGFQ+ F+T+ RGTG++SHVF++Y P + +
Sbjct: 428 KGDLQDMQPDGKGRVRLEYRIPARGLIGFQSLFMTMCRGTGIMSHVFDDYGPI---KQGE 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G+RR+GV+ISQ G+AVAY+LWK+Q+RGRLF+N D +YEGMIIG H+R+ND++VNPI+
Sbjct: 485 VGERRSGVIISQDDGEAVAYALWKIQERGRLFVNPGDKLYEGMIIGEHARENDIVVNPIR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTNIR+SG+DEAI+L+ P+K+TLE A+EFINDDELVEITP++IRLRKR+LK+ ERK+
Sbjct: 545 GKQLTNIRASGTDEAIRLVPPVKLTLESAVEFINDDELVEITPQSIRLRKRYLKDFERKR 604
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + ++ F + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDRLLQSAGTFRANQQVAERVMDSNDLERERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALAQGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|422322183|ref|ZP_16403225.1| GTP-binding elongation factor [Achromobacter xylosoxidans C54]
gi|317402832|gb|EFV83374.1| GTP-binding elongation factor [Achromobacter xylosoxidans C54]
Length = 607
Score = 853 bits (2203), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/596 (66%), Positives = 503/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V++ATFDLFDKL AT+EQLDFPV+Y S L GYA R+G+M PLFE
Sbjct: 129 KVDRPGARTDFVINATFDLFDKLGATDEQLDFPVVYASGLSGYAGLTPDVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP D+ N PLQ+QIISL+Y+SY+GKIG+GRI GR++ +V GP+ +
Sbjct: 189 AILQHVPQRDDDPNGPLQMQIISLDYNSYVGKIGVGRINRGRMRPGMEVAYKFGPEGQGG 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+R++V+EA +GDIVLI GIE++ IG T+ DP + LPML IDEPTL
Sbjct: 249 RGRINQVLKFHGLERIVVDEAEAGDIVLINGIEDLGIGCTVTDPVTQDVLPMLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+FK ++G EP+E+L +D+E+ +QG +M++L R GDL
Sbjct: 368 TILLETMRREGYELAVSRPRVVFKEVDGVKCEPFESLTIDVEDAHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH+F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYLIPARGLIGFQNEFLTLTRGTGLMSHIFHEYAPIKEGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F+N D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGDAVAYALWKLQDRGRMFVNPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVEITPK+IRLRKR+L+ENERK+
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEITPKSIRLRKRYLQENERKR 600
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E +T+ + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQALTERVMDSNDLEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|254252530|ref|ZP_04945848.1| hypothetical protein BDAG_01762 [Burkholderia dolosa AUO158]
gi|124895139|gb|EAY69019.1| hypothetical protein BDAG_01762 [Burkholderia dolosa AUO158]
Length = 608
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/596 (66%), Positives = 501/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAAREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL +VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+ +
Sbjct: 189 AILAHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQQVVMRFGPEGEVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVEAPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-RDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP S +G+R
Sbjct: 428 LDMASDGRGRTRLEYRIPARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKEGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKRFLKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRR 600
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|187478881|ref|YP_786905.1| GTP-binding protein [Bordetella avium 197N]
gi|115423467|emb|CAJ50001.1| GTP-binding protein [Bordetella avium 197N]
Length = 606
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/596 (66%), Positives = 502/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR++Q + R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFREHQAVAERVMDSNDLEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+ V++ATF+LFDKL ATEEQLDFPVIY S L GYA R+G+M PLFE
Sbjct: 129 KIDRPGARPDHVINATFELFDKLGATEEQLDFPVIYASGLSGYAGLTQDVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILK+VP D+ N PLQ+QIISL+Y+SY+GKIG+GR+ GR++ DV GP+ +
Sbjct: 189 AILKHVPQRDDDPNAPLQMQIISLDYNSYVGKIGVGRVNRGRMRPGMDVAFRFGPEGQVQ 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+RVLV+EA +GDIVLI GIE++ IG+T+ + + P LP+L IDEPTL
Sbjct: 249 RGRINQVLKFSGLERVLVDEAEAGDIVLINGIEDLNIGTTVTEVATPEALPVLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+FK ++G EP+E L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILLETMRREGYELAVSRPRVVFKEVDGVKCEPFEALTVDVEDPHQGGVMEELGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYIIPARGLIGFQNEFLTLTRGTGLMSHTFHEYAPVREGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGDAVAYALWKLQDRGRMFVSPGEPLYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI++TLEYA+EFI+DDELVEITPK+IRLRKR+L+E+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQLTLEYAVEFIDDDELVEITPKSIRLRKRYLQEHERRR 600
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFREHQAVAERVMDSNDLEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ D +
Sbjct: 128 NKIDRPGARPDHV 140
>gi|330999167|ref|ZP_08322886.1| GTP-binding protein TypA [Parasutterella excrementihominis YIT 11859]
gi|329575367|gb|EGG56911.1| GTP-binding protein TypA [Parasutterella excrementihominis YIT 11859]
Length = 616
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/600 (66%), Positives = 504/600 (84%), Gaps = 8/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTFR NQ + R+MDSN+IE+ERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLKQSGTFRANQAVAERVMDSNDIERERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQ----GNMI 1101
KIDR ARP+WV++ TFDLFDKL ATEEQLDFPVIY SAL+G+A + GNM
Sbjct: 129 KIDRPGARPDWVINQTFDLFDKLGATEEQLDFPVIYASALNGFAGFTDDVEELKKIGNMK 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
+F+ IL+ VPV D+ + PLQ+QI SL+YSSY+GKIGIGRI GRIK LQ+V+IMNGPD
Sbjct: 189 AIFDTILEKVPVRDDDPDAPLQMQISSLDYSSYVGKIGIGRIKRGRIKPLQEVLIMNGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
+P +AK+NQ+ F+GL+R LV+EA +GDIVLI GIEEI IG+T+ D + P+ LP+L++D
Sbjct: 249 SEPKRAKVNQVLKFQGLERKLVDEAEAGDIVLINGIEEIGIGTTLTDVNHPDALPLLHVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAG+EGKF+T+RQI+ RL+ E+K+N+ +R+ + ++ ++EV+GRG
Sbjct: 309 EPTLTMNFHVNTSPLAGKEGKFVTSRQIRERLERELKSNVAMRM-KPTDNEGVFEVAGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTILIENMRREGYEL+VSRPRV++K ++G EP+E L VD+EE +QG +M++L R
Sbjct: 368 ELHLTILIENMRREGYELAVSRPRVVYKEVDGVKMEPFEMLTVDVEENHQGPVMEELGRR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
GDL++++ + K RVRLEYRIP+RGLIGFQN+F+T+TRGTG++SHVF+EY P + D
Sbjct: 428 KGDLQDMQPDGKGRVRLEYRIPARGLIGFQNDFLTMTRGTGVMSHVFDEYGPVKSG---D 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
LG+RRNG +ISQ G AVAY+LWK+Q+RGRLFI + +YEGM+IG+HSRDND++V PIK
Sbjct: 485 LGERRNGAIISQDGGNAVAYALWKIQERGRLFIGPGEPIYEGMVIGVHSRDNDIVVTPIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTNIR+SG+DEAI+L+ PI++TLE A+EFINDDEL EITPK+IR+RKR+LKE ER++
Sbjct: 545 GKQLTNIRASGTDEAIRLVPPIQLTLESAVEFINDDELAEITPKSIRIRKRWLKEFERRR 604
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + F + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLKQSGTFRANQAVAERVMDSNDIERERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|238027577|ref|YP_002911808.1| GTP-binding protein TypA [Burkholderia glumae BGR1]
gi|237876771|gb|ACR29104.1| GTP-binding protein TypA [Burkholderia glumae BGR1]
Length = 606
Score = 848 bits (2191), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/596 (65%), Positives = 505/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQMVERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + +AR+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPQAREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+ +
Sbjct: 189 AILEHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGEVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V+ A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVDSAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-RDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + +NGE +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEINGEKHEPYELLTVDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRI +RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP + S +G+R
Sbjct: 428 LDMASDGRGRTRLEYRISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKDGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR+LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRYLKEHERRR 600
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQMVERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|161524921|ref|YP_001579933.1| GTP-binding protein TypA [Burkholderia multivorans ATCC 17616]
gi|189350329|ref|YP_001945957.1| GTP-binding protein [Burkholderia multivorans ATCC 17616]
gi|221197765|ref|ZP_03570811.1| GTP-binding protein TypA/BipA [Burkholderia multivorans CGD2M]
gi|221204677|ref|ZP_03577694.1| GTP-binding protein TypA/BipA [Burkholderia multivorans CGD2]
gi|221213154|ref|ZP_03586130.1| GTP-binding protein TypA/BipA [Burkholderia multivorans CGD1]
gi|421468624|ref|ZP_15917153.1| GTP-binding protein TypA [Burkholderia multivorans ATCC BAA-247]
gi|421477198|ref|ZP_15925040.1| GTP-binding protein TypA [Burkholderia multivorans CF2]
gi|160342350|gb|ABX15436.1| GTP-binding protein TypA [Burkholderia multivorans ATCC 17616]
gi|189334351|dbj|BAG43421.1| GTP-binding protein [Burkholderia multivorans ATCC 17616]
gi|221167367|gb|EED99837.1| GTP-binding protein TypA/BipA [Burkholderia multivorans CGD1]
gi|221175534|gb|EEE07964.1| GTP-binding protein TypA/BipA [Burkholderia multivorans CGD2]
gi|221181697|gb|EEE14098.1| GTP-binding protein TypA/BipA [Burkholderia multivorans CGD2M]
gi|400226927|gb|EJO56958.1| GTP-binding protein TypA [Burkholderia multivorans CF2]
gi|400231588|gb|EJO61271.1| GTP-binding protein TypA [Burkholderia multivorans ATCC BAA-247]
Length = 608
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/596 (65%), Positives = 500/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAAREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL +VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q V + GP+ +
Sbjct: 189 AILAHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQQVAMRFGPEGEVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-RDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP S +G+R
Sbjct: 428 LDMASDGRGRTRLEYRIPARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKEGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKRFLKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRR 600
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|303256979|ref|ZP_07342993.1| GTP-binding protein TypA/BipA [Burkholderiales bacterium 1_1_47]
gi|302860470|gb|EFL83547.1| GTP-binding protein TypA/BipA [Burkholderiales bacterium 1_1_47]
Length = 616
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/600 (66%), Positives = 504/600 (84%), Gaps = 8/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTFR NQ + R+MDSN+IE+ERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLKQSGTFRANQAVAERVMDSNDIERERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQ----GNMI 1101
KIDR ARP+WV++ TFDLFDKL ATEEQLDFPVIY SAL+G+A + GNM
Sbjct: 129 KIDRPGARPDWVINQTFDLFDKLGATEEQLDFPVIYASALNGFAGFTDDVEELKKIGNMK 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
+F+ IL+ VPV D+ + PLQ+QI SL+YSSY+GKIGIGRI GRIK LQ+V+IMNGPD
Sbjct: 189 AIFDTILEKVPVRDDDPDGPLQMQISSLDYSSYVGKIGIGRIKRGRIKPLQEVLIMNGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
+P +AK+NQ+ F+GL+R LV+EA +GDIVLI GIEEI IG+T+ D + P+ LP+L++D
Sbjct: 249 SEPKRAKVNQVLKFQGLERKLVDEAEAGDIVLINGIEEIGIGTTLTDVNHPDALPLLHVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAG+EGKF+T+RQI+ RL+ E+K+N+ +R+ + ++ ++EV+GRG
Sbjct: 309 EPTLTMNFHVNTSPLAGKEGKFVTSRQIRERLERELKSNVAMRM-KPTDNEGVFEVAGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTILIENMRREGYEL+VSRPRV++K ++G EP+E L VD+EE +QG +M++L R
Sbjct: 368 ELHLTILIENMRREGYELAVSRPRVVYKEVDGVKMEPFEMLTVDVEENHQGPVMEELGRR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
GDL++++ + K RVRLEYRIP+RGLIGFQN+F+T+TRGTG++SHVF+EY P + D
Sbjct: 428 KGDLQDMQPDGKGRVRLEYRIPARGLIGFQNDFLTMTRGTGVMSHVFDEYGPVKSG---D 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
LG+RRNG +ISQ G AVAY+LWK+Q+RGRLFI + +YEGM+IG+HSRDND++V PIK
Sbjct: 485 LGERRNGAIISQDDGNAVAYALWKIQERGRLFIGPGEPIYEGMVIGVHSRDNDIVVTPIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTNIR+SG+DEAI+L+ PI++TLE A+EFINDDEL EITPK+IR+RKR+LKE ER++
Sbjct: 545 GKQLTNIRASGTDEAIRLVPPIQLTLESAVEFINDDELAEITPKSIRIRKRWLKEFERRR 604
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + F + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLKQSGTFRANQAVAERVMDSNDIERERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|186476480|ref|YP_001857950.1| GTP-binding protein TypA [Burkholderia phymatum STM815]
gi|184192939|gb|ACC70904.1| GTP-binding protein TypA [Burkholderia phymatum STM815]
Length = 608
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/596 (65%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC+++Y GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVQYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATE+QLDFP++Y S L+GYA + R+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEDQLDFPIVYASGLNGYAGLDPSVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+ +
Sbjct: 189 AILEHVPVRPADPDGPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQQVVLRFGPEGEIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F+GL+RV V EA +GDIVLI GIEE+ IG+TIC P P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFEGLERVQVAEAEAGDIVLINGIEEVGIGATICAPEAPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAG+EGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGKEGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVLHEVDGVKHEPYELLTVDVEDTHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ EF+TLTRGTGL+SHVF+EY P S LG+R
Sbjct: 428 LDMASDGRGRTRLEYRIPARGLIGFQGEFMTLTRGTGLMSHVFDEYLPLKEGS---LGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVQYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|295676268|ref|YP_003604792.1| GTP-binding protein TypA [Burkholderia sp. CCGE1002]
gi|295436111|gb|ADG15281.1| GTP-binding protein TypA [Burkholderia sp. CCGE1002]
Length = 609
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/595 (65%), Positives = 496/595 (83%), Gaps = 4/595 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+ TFR+NQ I R+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQTATFRENQQIAERVMDSNDIEKERGITILSKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL A+EEQLDFP++Y S L+GYA R G+M PLFE
Sbjct: 129 KVDRPGARVDWVINQTFDLFDKLGASEEQLDFPIVYASGLNGYAGLTPDVRDGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + PLQLQI SL+YSSY+G+IGIGRI GRIK VV+ +GP+ +
Sbjct: 189 AILQHVPVRPADPEGPLQLQITSLDYSSYVGRIGIGRITRGRIKPGMAVVVRSGPEGEIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGLDRV V+ A +GDIVLI GIEE+ IG TIC P +P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLDRVQVDSAEAGDIVLINGIEEVGIGVTICSPEQPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++ +EV+GRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-RDTGDETTFEVAGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + +NGE +EPYENL VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEINGEKHEPYENLTVDMEDTHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRI +RGLIGFQ+EF+TLTRGTGL+SH F+ Y P + +G+R
Sbjct: 428 LDMASDGRGRTRLEYRISARGLIGFQSEFLTLTRGTGLMSHTFDSYQPVKEGA---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVSPGEALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TPK+IRLRKR+LKE+ER+
Sbjct: 545 TNVRASGTDEAVRLVPPVQLSLEYAVEFIDDDELVEVTPKSIRLRKRYLKEHERR 599
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQTATFRENQQIAERVMDSNDIEKERGITILSKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARVDWV 140
>gi|209520203|ref|ZP_03268974.1| GTP-binding protein TypA [Burkholderia sp. H160]
gi|209499362|gb|EDZ99446.1| GTP-binding protein TypA [Burkholderia sp. H160]
Length = 609
Score = 846 bits (2186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/595 (65%), Positives = 497/595 (83%), Gaps = 4/595 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+ TFR+NQ I R+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQTATFRENQQIAERVMDSNDIEKERGITILSKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL A+EEQLDFP++Y S L+GYA ++ R G+M PLFE
Sbjct: 129 KVDRPGARVDWVINQTFDLFDKLGASEEQLDFPIVYASGLNGYAGLSADVRDGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + PLQLQI SL+YSSY+G+IGIGRI GRIK V + +GP+ +
Sbjct: 189 AILEHVPVRPADPEGPLQLQITSLDYSSYVGRIGIGRITRGRIKPGMAVAVRSGPEGEIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGLDRV V+ A +GDIVLI GIEE+ IG TIC P +P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLDRVQVDSAEAGDIVLINGIEEVGIGVTICSPEQPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++ +EV+GRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-RDTGDETTFEVAGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + +NGE +EPYENL VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEINGEKHEPYENLTVDMEDTHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRI +RGLIGFQ+EF+TLTRGTGL+SH F+ Y P + +G+R
Sbjct: 428 LDMASDGRGRTRLEYRISARGLIGFQSEFLTLTRGTGLMSHTFDSYQPVKEGA---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVSPGEALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TPK+IRLRKR+LKE+ER+
Sbjct: 545 TNVRASGTDEAVRLVPPVQLSLEYAVEFIDDDELVEVTPKSIRLRKRYLKEHERR 599
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQTATFRENQQIAERVMDSNDIEKERGITILSKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARVDWV 140
>gi|307730021|ref|YP_003907245.1| GTP-binding protein TypA [Burkholderia sp. CCGE1003]
gi|307584556|gb|ADN57954.1| GTP-binding protein TypA [Burkholderia sp. CCGE1003]
Length = 608
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/600 (65%), Positives = 495/600 (82%), Gaps = 4/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+ TFR NQ + R+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQTATFRDNQQVAERVMDSNDIEKERGITILSKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL AT+EQLDFP++Y S L+GYA R+G+M PLFE
Sbjct: 129 KVDRPGARVDWVINQTFDLFDKLGATDEQLDFPIVYASGLNGYAGLTPDVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+LK+VPV + PLQLQI SL+YSSY+G+IG+GRI GRIK V + +GPD
Sbjct: 189 AVLKHVPVRAADPEGPLQLQITSLDYSSYVGRIGVGRITRGRIKPGMAVAVRSGPDGAIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V+ A +GDIVLI GIEEI IG TIC P +P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVDSAEAGDIVLINGIEEIGIGVTICSPEQPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++ +EV+GRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETTFEVAGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + +NG +EPYENL VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEINGVKHEPYENLTVDMEDAHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRI +RGLIGFQ+EF+TLTRGTGL+SH F+ Y P + +G+R
Sbjct: 428 LDMASDGRGRTRLEYRISARGLIGFQSEFLTLTRGTGLMSHTFDSYQPVKEGA---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G+AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGQAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TP++IRLRKR+LKE+ER+ K
Sbjct: 545 TNVRASGTDEAVRLVPPVQLSLEYAVEFIDDDELVEVTPQSIRLRKRYLKEHERRAASRK 604
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQTATFRDNQQVAERVMDSNDIEKERGITILSKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARVDWV 140
>gi|167587331|ref|ZP_02379719.1| GTP-binding protein TypA [Burkholderia ubonensis Bu]
Length = 608
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + R+G+M PLFE
Sbjct: 129 KVDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPATREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+
Sbjct: 189 AILQHVPVRPADPEAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVDAPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-RDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ NQG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDVEDENQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP + S +G+R
Sbjct: 428 LDMASDGRGRTRLEYRIPARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKDGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARIDWV 140
>gi|319778223|ref|YP_004129136.1| GTP-binding protein TypA [Taylorella equigenitalis MCE9]
gi|397662006|ref|YP_006502706.1| GTP-binding protein [Taylorella equigenitalis ATCC 35865]
gi|317108247|gb|ADU90993.1| GTP-binding protein TypA/BipA [Taylorella equigenitalis MCE9]
gi|394350185|gb|AFN36099.1| GTP-binding protein [Taylorella equigenitalis ATCC 35865]
gi|399115978|emb|CCG18783.1| GTP-binding protein [Taylorella equigenitalis 14/56]
Length = 606
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/596 (66%), Positives = 500/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI SKNC+++Y T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILSKNCAVQYEDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+D+VEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDSVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V++ TFDLFDKL ATEEQLDFPV+Y S L+GYA R G+M PLF+
Sbjct: 129 KIDRPGARPDYVLNTTFDLFDKLGATEEQLDFPVVYASGLNGYAGLTEDVRSGDMRPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKYVP DN++ P Q+QIISL+Y+SY+GKIGIGRI GR+K Q+V++ G D +
Sbjct: 189 TILKYVPQRNDNADGPFQMQIISLDYNSYVGKIGIGRINRGRVKPGQNVIVKFGEDGETF 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+IN++ FKGL+R V+ A +GDIVLI GIEEI IG T+CD + P LPML IDEPTL
Sbjct: 249 NGRINEVLKFKGLEREKVDSAEAGDIVLINGIEEIGIGCTLCDTNNPEALPMLKIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RL+ E+K+N+ LRV + DD+++EV+GRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLNLELKSNVALRVN-DTDDDTVFEVNGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G +EP E L +D+E+ +QG +M++L R G+L
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKHEPMELLTIDLEDEHQGGVMEELGRRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + + R RLEYRIP+RGLIGF +F+++TRGTGL+SH+F++YAP S +G+R
Sbjct: 428 LNMESDGRGRTRLEYRIPARGLIGFTGDFLSMTRGTGLMSHIFDDYAPVREGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGV+ISQ +G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVMISQDNGDAVAYALWKLQDRGRMFVSPGEALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEA++L+ PIK+TLEYA+EFI+DDELVE+TPKNIRLRKR+L+E+ER+K
Sbjct: 545 TNIRASGTDEAVRLVPPIKLTLEYAVEFIDDDELVEVTPKNIRLRKRYLQEHERRK 600
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILSKNCAVQYED 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V + +G MPQTR A G+ IV +
Sbjct: 68 THINIIDTPGHADFGGEVERVLSMVDGVLLLVDSVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|416981505|ref|ZP_11938068.1| GTP-binding protein TypA [Burkholderia sp. TJI49]
gi|325519600|gb|EGC98951.1| GTP-binding protein TypA [Burkholderia sp. TJI49]
Length = 608
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 501/596 (84%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ I R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + R+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPATREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILK+VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+
Sbjct: 189 AILKHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V+ A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVDSAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-RDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEY+I +RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP + S +G+R
Sbjct: 428 LDMASDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKDGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TP++IRLRKRFLKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPVQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRR 600
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|167836814|ref|ZP_02463697.1| GTP-binding protein TypA [Burkholderia thailandensis MSMB43]
gi|424904197|ref|ZP_18327707.1| GTP-binding protein TypA [Burkholderia thailandensis MSMB43]
gi|390930175|gb|EIP87577.1| GTP-binding protein TypA [Burkholderia thailandensis MSMB43]
Length = 608
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/596 (65%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL ATEEQLDFPV+Y S L+GYA+ + AR G+M PLFE
Sbjct: 129 KVDRPGARIDWVINQTFDLFDKLGATEEQLDFPVVYASGLNGYASLDPAARDGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+ +
Sbjct: 189 AILQHVPVRPADPEAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGEVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVEAPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEVDGVKHEPYELLTVDLEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP S +G+R
Sbjct: 428 LDMVSDGRGRTRLEYRIPARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVREGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARIDWV 140
>gi|390572528|ref|ZP_10252735.1| GTP-binding protein TypA [Burkholderia terrae BS001]
gi|420251905|ref|ZP_14755062.1| GTP-binding protein TypA/BipA [Burkholderia sp. BT03]
gi|389935540|gb|EIM97461.1| GTP-binding protein TypA [Burkholderia terrae BS001]
gi|398056609|gb|EJL48595.1| GTP-binding protein TypA/BipA [Burkholderia sp. BT03]
Length = 608
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/596 (65%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ I R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL A+E+QLDFP++Y S L+GYA+ + R+G M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGASEDQLDFPIVYASGLNGYADLDPSVREGTMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VVI GP+ +
Sbjct: 189 AILEHVPVRPADPDGPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQQVVIRFGPEGEIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F+GL+RV V EA +GDIVLI GIEE+ IG+TIC P P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFEGLERVQVAEAEAGDIVLINGIEEVGIGATICAPEAPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAG+EGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGKEGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYE++VSRPRV+ ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILIENMRREGYEMAVSRPRVVLHEVDGVKHEPYELLTVDLEDSHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ EF+TLTRGTGL+SHVF+EYAP S LG+R
Sbjct: 428 LDMASDGRGRTRLEYRIPARGLIGFQGEFLTLTRGTGLMSHVFDEYAPVREGS---LGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ I+++LEYA+EFI++DELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPAIQMSLEYAVEFIDEDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|323525732|ref|YP_004227885.1| GTP-binding protein TypA [Burkholderia sp. CCGE1001]
gi|407713094|ref|YP_006833659.1| GTP-binding protein [Burkholderia phenoliruptrix BR3459a]
gi|323382734|gb|ADX54825.1| GTP-binding protein TypA [Burkholderia sp. CCGE1001]
gi|407235278|gb|AFT85477.1| GTP-binding protein [Burkholderia phenoliruptrix BR3459a]
Length = 608
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/600 (64%), Positives = 494/600 (82%), Gaps = 4/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+ TFR NQ + R+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQTATFRDNQQVAERVMDSNDIEKERGITILSKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL AT+EQLDFP++Y S L+GYA R+G+M PLFE
Sbjct: 129 KVDRPGARVDWVINQTFDLFDKLGATDEQLDFPIVYASGLNGYAGLTPDVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+LK+VPV + PLQLQI SL+YSSY+G+IG+GRI GRIK V + +GPD
Sbjct: 189 AVLKHVPVRAADPEGPLQLQITSLDYSSYVGRIGVGRITRGRIKPGMAVAVRSGPDGAIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V+ A +GDIVLI GIEEI IG TIC P +P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVDSAEAGDIVLINGIEEIGIGVTICSPEQPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++ +EV+GRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETTFEVAGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYENL VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYENLTVDMEDAHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRI +RGLIGFQ+EF+TLTRGTGL+SH F+ Y P + +G+R
Sbjct: 428 LDMASDGRGRTRLEYRISARGLIGFQSEFLTLTRGTGLMSHTFDSYQPVKEGA---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TP++IRLRKR+LKE+ER+ K
Sbjct: 545 TNVRASGTDEAVRLVPPVQLSLEYAVEFIDDDELVEVTPQSIRLRKRYLKEHERRAASRK 604
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQTATFRDNQQVAERVMDSNDIEKERGITILSKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARVDWV 140
>gi|348590389|ref|YP_004874851.1| GTP-binding protein TypA/BipA [Taylorella asinigenitalis MCE3]
gi|347974293|gb|AEP36828.1| GTP-binding protein TypA/BipA [Taylorella asinigenitalis MCE3]
gi|399116250|emb|CCG19055.1| GTP-binding protein [Taylorella asinigenitalis 14/45]
Length = 606
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/596 (66%), Positives = 497/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI SKNC+++Y T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILSKNCAVQYEDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+D+VEGPMPQTRFVT+KAL G KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDSVEGPMPQTRFVTKKALAQGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V++ TFDLFDKL ATEEQLDFPV+Y S L+GYA R G+M PLFE
Sbjct: 129 KIDRPGARPDYVLNTTFDLFDKLGATEEQLDFPVVYASGLNGYAGLTEDVRSGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKYVP DN + P Q+QIISL+Y+SY+GKIGIGRI GR+K Q+VV+ G D +
Sbjct: 189 TILKYVPQRNDNVDGPFQMQIISLDYNSYVGKIGIGRINRGRVKPGQNVVVKFGEDGESF 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+IN++ FKGL+R V+ A +GDIVLI GIEEI IG T+CD S P LPML IDEPTL
Sbjct: 249 NGRINEVLKFKGLEREKVDSAEAGDIVLINGIEEIGIGCTLCDVSAPEALPMLKIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RL+ E+K+N+ LRV + DD+++EV+GRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLNLELKSNVALRVN-DTDDDTVFEVNGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+FK ++G +EP E L +D+E+ +QG +M++L R G+L
Sbjct: 368 TILLENMRREGYELAVSRPRVVFKEIDGVKHEPMELLTIDLEDEHQGGVMEELGRRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + + R RLEYRIP+RGLIGF +F+++TRGTGL+SH+F++YAP S +G+R
Sbjct: 428 LNMESDGRGRTRLEYRIPARGLIGFTGDFLSMTRGTGLMSHIFDDYAPVREGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGDAVAYALWKLQDRGRMFVSPGEALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEA++L+ PIK+TLEYA+EFI+DDELVE+TPKNIRLRKR L+E+ER+K
Sbjct: 545 TNIRASGTDEAVRLVPPIKLTLEYAVEFIDDDELVEVTPKNIRLRKRHLQEHERRK 600
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILSKNCAVQYED 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V + +G MPQTR A G+ IV +
Sbjct: 68 THINIIDTPGHADFGGEVERVLSMVDGVLLLVDSVEGPMPQTRFVTKKALAQGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|350545789|ref|ZP_08915242.1| GTP-binding protein TypA/BipA [Candidatus Burkholderia kirkii
UZHbot1]
gi|350526427|emb|CCD40451.1| GTP-binding protein TypA/BipA [Candidatus Burkholderia kirkii
UZHbot1]
Length = 607
Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/596 (65%), Positives = 496/596 (83%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ FDLFDKL ATEEQLDFPV+Y S L+GYA+ + + R+G M PLFE
Sbjct: 129 KVDRPGARIDWVINQMFDLFDKLGATEEQLDFPVVYASGLNGYASVDPETREGTMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+Y+SY+G+IG+GR+ GRI+ V + +GPD
Sbjct: 189 AILQHVPVRPADPDGPLQLQITSLDYNSYVGRIGVGRVARGRIRPGMQVAVRSGPDGAIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F GL+RV V EA +GDIVLI GIEEI IG TIC P +P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFHGLERVQVEEAQAGDIVLINGIEEIGIGVTICSPEQPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAG+EGKF+T+RQI++RL E+ +N+ LRV ++ D++ +EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGKEGKFVTSRQIRDRLTKELNHNVALRV-KDTGDETTFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G EPYENL VDIE+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVLQEIDGVKCEPYENLTVDIEDTHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEY+I +RGLIGFQ+EF+TLTRGTGL+SH F+ YAP K +GKR
Sbjct: 428 LDMTSDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHTFDSYAPV----KDSVGKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGM+IGIHSRDNDL+VNPIK +QL
Sbjct: 484 RNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMVIGIHSRDNDLVVNPIKGRQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++LI PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 544 TNVRASGTDEAVRLIPPIQLSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 599
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARIDWV 140
>gi|126441255|ref|YP_001058787.1| GTP-binding protein TypA [Burkholderia pseudomallei 668]
gi|126453085|ref|YP_001066040.1| GTP-binding protein TypA [Burkholderia pseudomallei 1106a]
gi|134282294|ref|ZP_01768999.1| GTP-binding protein TypA [Burkholderia pseudomallei 305]
gi|167738809|ref|ZP_02411583.1| GTP-binding protein TypA [Burkholderia pseudomallei 14]
gi|167845939|ref|ZP_02471447.1| GTP-binding protein TypA [Burkholderia pseudomallei B7210]
gi|242314379|ref|ZP_04813395.1| GTP-binding protein TypA [Burkholderia pseudomallei 1106b]
gi|254188615|ref|ZP_04895126.1| GTP-binding protein TypA [Burkholderia pseudomallei Pasteur 52237]
gi|403518473|ref|YP_006652606.1| GTP-binding protein TypA [Burkholderia pseudomallei BPC006]
gi|126220748|gb|ABN84254.1| GTP-binding protein TypA [Burkholderia pseudomallei 668]
gi|126226727|gb|ABN90267.1| GTP-binding protein TypA [Burkholderia pseudomallei 1106a]
gi|134246332|gb|EBA46421.1| GTP-binding protein TypA [Burkholderia pseudomallei 305]
gi|157936294|gb|EDO91964.1| GTP-binding protein TypA [Burkholderia pseudomallei Pasteur 52237]
gi|242137618|gb|EES24020.1| GTP-binding protein TypA [Burkholderia pseudomallei 1106b]
gi|403074115|gb|AFR15695.1| GTP-binding protein TypA [Burkholderia pseudomallei BPC006]
Length = 608
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 500/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAARDGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+
Sbjct: 189 AILQHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F+GL+RV V+ A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFQGLERVQVDSAEAGDIVLINGIEDVGIGATICAVEAPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEVDGVKHEPYELLTVDLEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP S +G+R
Sbjct: 428 LDMVSDGRGRTRLEYRIPARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKEGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|53719525|ref|YP_108511.1| GTP-binding protein [Burkholderia pseudomallei K96243]
gi|53724833|ref|YP_102752.1| GTP-binding protein TypA [Burkholderia mallei ATCC 23344]
gi|67639280|ref|ZP_00438155.1| GTP-binding protein TypA/BipA [Burkholderia mallei GB8 horse 4]
gi|76810217|ref|YP_333322.1| GTP-binding protein TypA [Burkholderia pseudomallei 1710b]
gi|121600099|ref|YP_992829.1| GTP-binding protein TypA [Burkholderia mallei SAVP1]
gi|124384122|ref|YP_001026172.1| GTP-binding protein TypA [Burkholderia mallei NCTC 10229]
gi|126451057|ref|YP_001080558.1| GTP-binding protein TypA [Burkholderia mallei NCTC 10247]
gi|167001008|ref|ZP_02266809.1| GTP-binding protein TypA [Burkholderia mallei PRL-20]
gi|167719808|ref|ZP_02403044.1| GTP-binding protein TypA [Burkholderia pseudomallei DM98]
gi|167816032|ref|ZP_02447712.1| GTP-binding protein TypA [Burkholderia pseudomallei 91]
gi|167894516|ref|ZP_02481918.1| GTP-binding protein TypA [Burkholderia pseudomallei 7894]
gi|167902918|ref|ZP_02490123.1| GTP-binding protein TypA [Burkholderia pseudomallei NCTC 13177]
gi|167911157|ref|ZP_02498248.1| GTP-binding protein TypA [Burkholderia pseudomallei 112]
gi|167919180|ref|ZP_02506271.1| GTP-binding protein TypA [Burkholderia pseudomallei BCC215]
gi|217423786|ref|ZP_03455287.1| GTP-binding protein TypA [Burkholderia pseudomallei 576]
gi|237812050|ref|YP_002896501.1| GTP-binding protein TypA/BipA [Burkholderia pseudomallei MSHR346]
gi|254178313|ref|ZP_04884968.1| GTP-binding protein TypA [Burkholderia mallei ATCC 10399]
gi|254179974|ref|ZP_04886573.1| GTP-binding protein TypA [Burkholderia pseudomallei 1655]
gi|254197713|ref|ZP_04904135.1| GTP-binding protein TypA [Burkholderia pseudomallei S13]
gi|254199701|ref|ZP_04906067.1| GTP-binding protein TypA [Burkholderia mallei FMH]
gi|254206024|ref|ZP_04912376.1| GTP-binding protein TypA [Burkholderia mallei JHU]
gi|254261029|ref|ZP_04952083.1| GTP-binding protein TypA [Burkholderia pseudomallei 1710a]
gi|254297809|ref|ZP_04965262.1| GTP-binding protein TypA [Burkholderia pseudomallei 406e]
gi|254358396|ref|ZP_04974669.1| GTP-binding protein TypA [Burkholderia mallei 2002721280]
gi|386861945|ref|YP_006274894.1| GTP-binding protein TypA [Burkholderia pseudomallei 1026b]
gi|418387504|ref|ZP_12967363.1| GTP-binding protein TypA [Burkholderia pseudomallei 354a]
gi|418534091|ref|ZP_13099940.1| GTP-binding protein TypA [Burkholderia pseudomallei 1026a]
gi|418541134|ref|ZP_13106632.1| GTP-binding protein TypA [Burkholderia pseudomallei 1258a]
gi|418547374|ref|ZP_13112534.1| GTP-binding protein TypA [Burkholderia pseudomallei 1258b]
gi|418553555|ref|ZP_13118375.1| GTP-binding protein TypA [Burkholderia pseudomallei 354e]
gi|52209939|emb|CAH35911.1| GTP-binding protein [Burkholderia pseudomallei K96243]
gi|52428256|gb|AAU48849.1| GTP-binding protein TypA [Burkholderia mallei ATCC 23344]
gi|76579670|gb|ABA49145.1| GTP-binding protein TypA [Burkholderia pseudomallei 1710b]
gi|121228909|gb|ABM51427.1| GTP-binding protein TypA [Burkholderia mallei SAVP1]
gi|124292142|gb|ABN01411.1| GTP-binding protein TypA [Burkholderia mallei NCTC 10229]
gi|126243927|gb|ABO07020.1| GTP-binding protein TypA [Burkholderia mallei NCTC 10247]
gi|147749297|gb|EDK56371.1| GTP-binding protein TypA [Burkholderia mallei FMH]
gi|147753467|gb|EDK60532.1| GTP-binding protein TypA [Burkholderia mallei JHU]
gi|148027523|gb|EDK85544.1| GTP-binding protein TypA [Burkholderia mallei 2002721280]
gi|157806811|gb|EDO83981.1| GTP-binding protein TypA [Burkholderia pseudomallei 406e]
gi|160699352|gb|EDP89322.1| GTP-binding protein TypA [Burkholderia mallei ATCC 10399]
gi|169654454|gb|EDS87147.1| GTP-binding protein TypA [Burkholderia pseudomallei S13]
gi|184210514|gb|EDU07557.1| GTP-binding protein TypA [Burkholderia pseudomallei 1655]
gi|217393644|gb|EEC33665.1| GTP-binding protein TypA [Burkholderia pseudomallei 576]
gi|237504131|gb|ACQ96449.1| GTP-binding protein TypA/BipA [Burkholderia pseudomallei MSHR346]
gi|238519814|gb|EEP83280.1| GTP-binding protein TypA/BipA [Burkholderia mallei GB8 horse 4]
gi|243063186|gb|EES45372.1| GTP-binding protein TypA [Burkholderia mallei PRL-20]
gi|254219718|gb|EET09102.1| GTP-binding protein TypA [Burkholderia pseudomallei 1710a]
gi|385358894|gb|EIF64875.1| GTP-binding protein TypA [Burkholderia pseudomallei 1258a]
gi|385359950|gb|EIF65896.1| GTP-binding protein TypA [Burkholderia pseudomallei 1026a]
gi|385361589|gb|EIF67473.1| GTP-binding protein TypA [Burkholderia pseudomallei 1258b]
gi|385371464|gb|EIF76640.1| GTP-binding protein TypA [Burkholderia pseudomallei 354e]
gi|385376276|gb|EIF80971.1| GTP-binding protein TypA [Burkholderia pseudomallei 354a]
gi|385659073|gb|AFI66496.1| GTP-binding protein TypA [Burkholderia pseudomallei 1026b]
Length = 608
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 500/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAARDGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+
Sbjct: 189 AILQHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F+GL+RV V+ A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFQGLERVQVDSAEAGDIVLINGIEDVGIGATICAVEAPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDLEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP S +G+R
Sbjct: 428 LDMVSDGRGRTRLEYRIPARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKEGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|330816701|ref|YP_004360406.1| GTP-binding protein TypA [Burkholderia gladioli BSR3]
gi|327369094|gb|AEA60450.1| GTP-binding protein TypA [Burkholderia gladioli BSR3]
Length = 606
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQMVERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ +S AR G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDSSARDGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+ +
Sbjct: 189 AILQHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGEVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 SRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-RDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G EPYE L +D+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVLQEVDGVKQEPYEQLTIDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEY+I +RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP S +G+R
Sbjct: 428 LDMASDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKEGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQMVERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|377821064|ref|YP_004977435.1| GTP-binding protein TypA [Burkholderia sp. YI23]
gi|357935899|gb|AET89458.1| GTP-binding protein TypA [Burkholderia sp. YI23]
Length = 608
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/596 (65%), Positives = 494/596 (82%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+G+A N R+G M PLFE
Sbjct: 129 KVDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGFAGLNPDVREGTMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+Y+SY+G+IG+GR+ GRI+ V + +GPD
Sbjct: 189 AILEHVPVRPADPDGPLQLQITSLDYNSYVGRIGVGRVARGRIRPGMQVAVRSGPDGAII 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F GL+RV V EA +GDIVLI GIEEI IG TIC P P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFHGLERVQVEEAQAGDIVLINGIEEIGIGVTICSPDNPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAG+EGKF+T+RQI++RL E+ +N+ LRV ++ D++ +EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGKEGKFVTSRQIRDRLTKELNHNVALRV-KDTGDETTFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G EPYENL VDIE+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVLQEIDGVKCEPYENLTVDIEDQHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEY+I +RGLIGFQ+EF+TLTRGTGL+SH F+ YAP S +G+R
Sbjct: 428 LDMTSDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHTFDSYAPVKEGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQLSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARIDWV 140
>gi|167582079|ref|ZP_02374953.1| GTP-binding protein TypA [Burkholderia thailandensis TXDOH]
Length = 608
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/596 (65%), Positives = 497/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ I R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAARDGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q V + GP+ +
Sbjct: 189 AILEHVPVRPADPEAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVAMRFGPEGEVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDLEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ EF+TLTRGTGL+SH+F+ YAP S +G+R
Sbjct: 428 LDMVSDGRGRTRLEYRIPARGLIGFQGEFLTLTRGTGLMSHIFDSYAPVKEGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|452128081|ref|ZP_21940660.1| GTP-binding protein [Bordetella holmesii H558]
gi|451926296|gb|EMD76432.1| GTP-binding protein [Bordetella holmesii H558]
Length = 606
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/596 (66%), Positives = 500/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQAVAERVMDSNDLEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V++ATF+LFDKL ATEEQLDFPVIY S L GYA R G+M PLFE
Sbjct: 129 KIDRPGARPDFVINATFELFDKLGATEEQLDFPVIYASGLSGYAGLTEDVRSGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+LK+VP +D+ N PLQ+QIISL+Y+SY+GKIG+GR+ GR++ DV GP+ +
Sbjct: 189 AVLKHVPQREDDPNGPLQMQIISLDYNSYVGKIGVGRVNRGRMRPGMDVAFRFGPEGQVQ 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+R +V EA +GDIVLI GIE++ IG+T+ D S P LP+L IDEPTL
Sbjct: 249 RGRINQVLKFSGLEREVVEEAEAGDIVLINGIEDLNIGTTVTDTSTPEALPVLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+FK +NG EPYE L VD+E+ +QG +M++L R GDL
Sbjct: 368 TILLETMRREGYELAVSRPRVVFKEVNGVKCEPYEALTVDVEDGHQGGVMEELGRRRGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYIIPARGLIGFQNEFLTLTRGTGLMSHTFHEYAPVREGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGDAVAYALWKLQDRGRMFVSPGEPLYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI++TLEYA+EFI+DDELVEITPK IRLRKR+L+E+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQLTLEYAVEFIDDDELVEITPKFIRLRKRYLQEHERRR 600
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQAVAERVMDSNDLEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|171317099|ref|ZP_02906302.1| GTP-binding protein TypA [Burkholderia ambifaria MEX-5]
gi|171097733|gb|EDT42560.1| GTP-binding protein TypA [Burkholderia ambifaria MEX-5]
Length = 608
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/596 (65%), Positives = 500/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ I R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAAREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+
Sbjct: 189 AILEHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F GL+RV V+ A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFTGLERVQVDSAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVRHEPYELLTVDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEY+I +RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP + S ++ R
Sbjct: 428 LDMASDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKDGSVFE---R 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TP++IRLRKRFLKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPVQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRR 600
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|107022580|ref|YP_620907.1| GTP-binding protein TypA [Burkholderia cenocepacia AU 1054]
gi|116689529|ref|YP_835152.1| GTP-binding protein TypA [Burkholderia cenocepacia HI2424]
gi|170732833|ref|YP_001764780.1| GTP-binding protein TypA [Burkholderia cenocepacia MC0-3]
gi|254245579|ref|ZP_04938900.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
gi|105892769|gb|ABF75934.1| GTP-binding protein TypA [Burkholderia cenocepacia AU 1054]
gi|116647618|gb|ABK08259.1| GTP-binding protein TypA [Burkholderia cenocepacia HI2424]
gi|124870355|gb|EAY62071.1| Small GTP-binding protein domain [Burkholderia cenocepacia PC184]
gi|169816075|gb|ACA90658.1| GTP-binding protein TypA [Burkholderia cenocepacia MC0-3]
Length = 608
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/596 (65%), Positives = 498/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ I R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRDNQQIAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+NI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HVNIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAAREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+
Sbjct: 189 AILEHVPVRPADPEAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVRHEPYELLTVDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEY+I +RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP + S ++ R
Sbjct: 428 LDMASDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKDGSVFE---R 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TP++IRLRKRFLKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPVQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRR 600
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRDNQQIAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THVNIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|83720444|ref|YP_443074.1| GTP-binding protein TypA [Burkholderia thailandensis E264]
gi|167620240|ref|ZP_02388871.1| GTP-binding protein TypA [Burkholderia thailandensis Bt4]
gi|257139304|ref|ZP_05587566.1| GTP-binding protein TypA [Burkholderia thailandensis E264]
gi|83654269|gb|ABC38332.1| GTP-binding protein TypA [Burkholderia thailandensis E264]
Length = 608
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/596 (65%), Positives = 497/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ I R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAARDGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q V + GP+ +
Sbjct: 189 AILEHVPVRPADPEAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVAMRFGPEGEVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVDVPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDLEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ EF+TLTRGTGL+SH+F+ YAP S +G+R
Sbjct: 428 LDMVSDGRGRTRLEYRIPARGLIGFQGEFLTLTRGTGLMSHIFDSYAPVKEGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|206559880|ref|YP_002230644.1| GTP-binding protein [Burkholderia cenocepacia J2315]
gi|421865339|ref|ZP_16297019.1| GTP-binding protein TypA/BipA [Burkholderia cenocepacia H111]
gi|444364542|ref|ZP_21164855.1| GTP-binding protein TypA [Burkholderia cenocepacia BC7]
gi|444371143|ref|ZP_21170721.1| GTP-binding protein TypA [Burkholderia cenocepacia K56-2Valvano]
gi|198035921|emb|CAR51813.1| GTP-binding protein [Burkholderia cenocepacia J2315]
gi|358074802|emb|CCE47897.1| GTP-binding protein TypA/BipA [Burkholderia cenocepacia H111]
gi|443592761|gb|ELT61541.1| GTP-binding protein TypA [Burkholderia cenocepacia BC7]
gi|443595920|gb|ELT64461.1| GTP-binding protein TypA [Burkholderia cenocepacia K56-2Valvano]
Length = 608
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/596 (65%), Positives = 498/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRDNQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+NI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HVNIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAAREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+
Sbjct: 189 AILEHVPVRPADPEAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVRHEPYELLTVDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEY+I +RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP + S ++ R
Sbjct: 428 LDMASDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKDGSVFE---R 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TP++IRLRKRFLKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPVQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRR 600
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRDNQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THVNIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|134295581|ref|YP_001119316.1| GTP-binding protein TypA [Burkholderia vietnamiensis G4]
gi|387902100|ref|YP_006332439.1| GTP-binding protein TypA/BipA [Burkholderia sp. KJ006]
gi|134138738|gb|ABO54481.1| GTP-binding protein TypA [Burkholderia vietnamiensis G4]
gi|387576992|gb|AFJ85708.1| GTP-binding protein TypA/BipA [Burkholderia sp. KJ006]
Length = 608
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/596 (65%), Positives = 497/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ I R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + R+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPATREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL +VPV + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ GP+ +
Sbjct: 189 AILAHVPVRPADPEAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGPEGEVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVESAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRI +RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP S ++ R
Sbjct: 428 LDMASDGRGRTRLEYRISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKEGSVFE---R 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TP++IRLRKRFLKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPVQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRR 600
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|452124687|ref|ZP_21937271.1| GTP-binding protein [Bordetella holmesii F627]
gi|451923917|gb|EMD74058.1| GTP-binding protein [Bordetella holmesii F627]
Length = 606
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/596 (66%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN++EKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQAVAERVMDSNDLEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V++ATF+LFDKL ATEEQLDFPVIY S L GYA R G+M PLFE
Sbjct: 129 KIDRPGARPDFVINATFELFDKLGATEEQLDFPVIYASGLSGYAGLTEDVRSGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+LK+VP +D+ N PLQ+QIISL+Y+SY+GKIG+GR+ GR++ DV GP+ +
Sbjct: 189 AVLKHVPQREDDPNGPLQMQIISLDYNSYVGKIGVGRVNRGRMRPGMDVAFRFGPEGQVQ 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+R +V EA +GDIVLI GIE++ IG+T+ D S P LP+L IDEPTL
Sbjct: 249 RGRINQVLKFSGLEREVVEEAEAGDIVLINGIEDLNIGTTVTDTSTPEALPVLRIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQ+++RLD E+K+N+ LRV ++ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGREGKFVTSRQLRDRLDRELKSNVALRV-RDTGDDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRPRV+FK +NG EPYE L D+E+ +QG +M++L R GDL
Sbjct: 368 TILLETMRREGYELAVSRPRVVFKEVNGVKCEPYEALTADVEDGHQGGVMEELGRRRGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + R RLEY IP+RGLIGFQNEF+TLTRGTGL+SH F EYAP S +G+R
Sbjct: 428 QDMQPDGRGRTRLEYIIPARGLIGFQNEFLTLTRGTGLMSHTFHEYAPVREGS---IGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDNGDAVAYALWKLQDRGRMFVSPGEPLYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI++TLEYA+EFI+DDELVEITPK IRLRKR+L+E+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQLTLEYAVEFIDDDELVEITPKFIRLRKRYLQEHERRR 600
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTFRENQAVAERVMDSNDLEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTIFVTRKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|422349686|ref|ZP_16430575.1| GTP-binding protein TypA/BipA [Sutterella wadsworthensis 2_1_59BFAA]
gi|404657895|gb|EKB30775.1| GTP-binding protein TypA/BipA [Sutterella wadsworthensis 2_1_59BFAA]
Length = 618
Score = 840 bits (2170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/600 (65%), Positives = 500/600 (83%), Gaps = 8/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLR +GTFR NQ + R+MDSN++E+ERGITI SKNC++EY GT
Sbjct: 9 AIIAHVDHGKTTMVDCLLRSAGTFRANQQVAERVMDSNDLERERGITILSKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL G KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALAQGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQ----GNMI 1101
KIDR ARP+WVV+ TFDLFDKL ATE+QLDFPVIY SAL+G+A + + GNM
Sbjct: 129 KIDRPGARPDWVVNQTFDLFDKLGATEDQLDFPVIYASALNGFAGHTTDVEELKQIGNMR 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
+F+ I+KY+PV D+ + PL LQI SL+YSSY+GKIGIGR+ GRI+ DV IMNGP+
Sbjct: 189 AVFDDIIKYIPVRDDDPDGPLMLQICSLDYSSYVGKIGIGRVHRGRIRPNMDVAIMNGPE 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
D P + KINQ+ F+GL+R LV+EA +GDIVL+ GIEE+ IG+TI D +P LPML +D
Sbjct: 249 DTPKRVKINQVLKFEGLERQLVDEAEAGDIVLVNGIEELSIGTTITDLQQPEALPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN+SPLAGREGKF+T+RQI+ RL+ E+K+N+ +RV +N D++++EV+GRG
Sbjct: 309 EPTLTMNFQVNSSPLAGREGKFVTSRQIRERLERELKSNVAMRV-RNTDDETVWEVAGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREG+EL+VSRPRV+ K ++G EPYE L VD+EE +QG +M++L R
Sbjct: 368 ELHLTILLENMRREGFELAVSRPRVLLKEVDGVKMEPYELLTVDVEEEHQGSVMEELGRR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
GDL++++ + K RVRLEYRIP+RGLIGFQ+ F+T+ RGTG++SHVF++Y P S+ D
Sbjct: 428 KGDLQDMQPDGKGRVRLEYRIPARGLIGFQSLFMTMCRGTGIMSHVFDDYGPI---SRGD 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G+RR+GV+ISQ G AVAY+LWK+Q+RGRLF++ D +YEGMIIG H+R+ND++VNPI+
Sbjct: 485 IGERRSGVIISQDDGDAVAYALWKIQERGRLFVSPGDKLYEGMIIGEHARENDIVVNPIR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTNIR+SG+DEAI+L+ P+K+TLE A+EFINDDELVEITP +IRLRKR+LK+ ERK+
Sbjct: 545 GKQLTNIRASGTDEAIRLVPPVKLTLESAVEFINDDELVEITPHSIRLRKRYLKDFERKR 604
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + ++ F + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDCLLRSAGTFRANQQVAERVMDSNDLERERGITILSKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALAQGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|167562931|ref|ZP_02355847.1| GTP-binding protein TypA [Burkholderia oklahomensis EO147]
gi|167570121|ref|ZP_02362995.1| GTP-binding protein TypA [Burkholderia oklahomensis C6786]
Length = 608
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 496/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAARDGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + PLQLQI SL+YS+Y+G+IG+GRI GRIK VV+ GP+
Sbjct: 189 AILEHVPVRPADPEAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGMPVVMRFGPEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F+GL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 SRKINQVLSFEGLERVQVESAEAGDIVLINGIEDVGIGATICAADTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDLEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ EF+TLTRGTGL+SH+F+ YAP S +G+R
Sbjct: 428 LDMVSDGRGRTRLEYRIPARGLIGFQGEFLTLTRGTGLMSHIFDAYAPVREGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|413962430|ref|ZP_11401657.1| GTP-binding protein TypA [Burkholderia sp. SJ98]
gi|413928262|gb|EKS67550.1| GTP-binding protein TypA [Burkholderia sp. SJ98]
Length = 608
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/596 (65%), Positives = 493/596 (82%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+G+A R+G M PLFE
Sbjct: 129 KVDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGFAGLEPDVREGTMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+Y+SY+G+IG+GR+ GRI+ V + +GPD
Sbjct: 189 AILEHVPVRPADPDGPLQLQITSLDYNSYVGRIGVGRVARGRIRPGMQVAVRSGPDGAIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F GL+RV V EA +GDIVLI GIEEI IG TIC P P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFHGLERVQVEEAQAGDIVLINGIEEIGIGVTICSPDNPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAG+EGKF+T+RQI++RL E+ +N+ LRV ++ D++ +EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGKEGKFVTSRQIRDRLTKELNHNVALRV-KDTGDETTFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G EPYENL VDIE+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVLQEIDGVKCEPYENLTVDIEDQHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEY+I +RGLIGFQ+EF+TLTRGTGL+SH F+ YAP S +G+R
Sbjct: 428 LDMTSDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHTFDSYAPVKEGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVSPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQLSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARIDWV 140
>gi|91782996|ref|YP_558202.1| GTP-binding protein TypA [Burkholderia xenovorans LB400]
gi|91686950|gb|ABE30150.1| GTP-binding protein TypA [Burkholderia xenovorans LB400]
Length = 608
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/600 (64%), Positives = 493/600 (82%), Gaps = 4/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+ TFR NQ I R+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQTATFRDNQQIAERVMDSNDIEKERGITILSKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL AT+EQLDFP++Y S L+GYA R+G+M PLFE
Sbjct: 129 KVDRPGARIDWVINQTFDLFDKLGATDEQLDFPIVYASGLNGYAGLTPDVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+L++VPV + + PLQLQI SL+YSSY+G+IG+GRI GRIK V + +GPD
Sbjct: 189 AVLQHVPVRPADPDAPLQLQITSLDYSSYVGRIGVGRITRGRIKPGMAVAVRSGPDGAIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V+ A +GDIVLI GIEEI IG TIC P +P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVDSAEAGDIVLINGIEEIGIGVTICAPEQPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV + D++ +EV+GRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRVKETG-DETTFEVAGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ ++G +EPYENL VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMTEVDGVKHEPYENLTVDMEDAHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRI +RGLIGFQ+EF+TLTRGTGL+SH F+ Y P + +G+R
Sbjct: 428 LDMASDGRGRTRLEYRISARGLIGFQSEFLTLTRGTGLMSHTFDSYQPVKEGA---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVSPGEPLYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+RSSG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR+LKE+ER+ K
Sbjct: 545 TNVRSSGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRYLKEHERRSASRK 604
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQTATFRDNQQIAERVMDSNDIEKERGITILSKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARIDWV 140
>gi|115351442|ref|YP_773281.1| GTP-binding protein TypA [Burkholderia ambifaria AMMD]
gi|170700015|ref|ZP_02891040.1| GTP-binding protein TypA [Burkholderia ambifaria IOP40-10]
gi|172060481|ref|YP_001808133.1| GTP-binding protein TypA [Burkholderia ambifaria MC40-6]
gi|115281430|gb|ABI86947.1| GTP-binding protein TypA [Burkholderia ambifaria AMMD]
gi|170135074|gb|EDT03377.1| GTP-binding protein TypA [Burkholderia ambifaria IOP40-10]
gi|171992998|gb|ACB63917.1| GTP-binding protein TypA [Burkholderia ambifaria MC40-6]
Length = 608
Score = 838 bits (2166), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/596 (64%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ I R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIV+VN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVIVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAAREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+L++VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q V + GP+
Sbjct: 189 AVLQHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVAMRFGPEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F GL+RV V+ A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFTGLERVQVDSAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVRHEPYELLTVDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEY+I +RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP + S ++ R
Sbjct: 428 LDMASDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKDGSVFE---R 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TP++IRLRKRFLKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPVQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRR 600
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVIV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|167824407|ref|ZP_02455878.1| GTP-binding protein TypA [Burkholderia pseudomallei 9]
gi|226199707|ref|ZP_03795260.1| GTP-binding protein TypA [Burkholderia pseudomallei Pakistan 9]
gi|225928293|gb|EEH24327.1| GTP-binding protein TypA [Burkholderia pseudomallei Pakistan 9]
Length = 608
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/596 (65%), Positives = 499/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAARDGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VPV + + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q VV+ G +
Sbjct: 189 AILQHVPVRPADPDAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVVMRFGLEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F+GL+RV V+ A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFQGLERVQVDSAEAGDIVLINGIEDVGIGATICAVEAPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYELLTVDLEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRIP+RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP S +G+R
Sbjct: 428 LDMVSDGRGRTRLEYRIPARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKEGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR LKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRHLKEHERRR 600
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|78066118|ref|YP_368887.1| GTP-binding protein TypA [Burkholderia sp. 383]
gi|402566694|ref|YP_006616039.1| GTP-binding protein TypA [Burkholderia cepacia GG4]
gi|77966863|gb|ABB08243.1| GTP-binding protein TypA [Burkholderia sp. 383]
gi|402247891|gb|AFQ48345.1| GTP-binding protein TypA [Burkholderia cepacia GG4]
Length = 608
Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/596 (64%), Positives = 497/596 (83%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ I R+MDSN+IEKERGITI +KNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIV+VN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVIVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL ATEEQLDFP++Y S L+GYA+ + AR+G+M PLFE
Sbjct: 129 KIDRPGARIDWVINQTFDLFDKLGATEEQLDFPIVYASGLNGYASLDPAAREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+L++VPV + PLQLQI SL+YS+Y+G+IG+GRI GRIK Q V + GP+
Sbjct: 189 AVLEHVPVRPADPEAPLQLQITSLDYSTYVGRIGVGRITRGRIKPGQPVAMRFGPEGDVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F GL+RV V A +GDIVLI GIE++ IG+TIC P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFTGLERVQVESAEAGDIVLINGIEDVGIGATICAVDTPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRV-KDTGDETVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYE L VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVRHEPYELLTVDVEDEHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEY+I +RGLIGFQ+EF+TLTRGTGL+SH+F+ YAP + S ++ R
Sbjct: 428 LDMASDGRGRTRLEYKISARGLIGFQSEFLTLTRGTGLMSHIFDSYAPVKDGSVFE---R 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVKPGDALYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ P++++LEYA+EFI+DDELVE+TP++IRLRKRFLKE+ER++
Sbjct: 545 TNVRASGTDEAVRLVPPVQMSLEYAVEFIDDDELVEVTPQSIRLRKRFLKEHERRR 600
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQIAERVMDSNDIEKERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVIV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ +D +
Sbjct: 128 NKIDRPGARIDWV 140
>gi|187923631|ref|YP_001895273.1| GTP-binding protein TypA [Burkholderia phytofirmans PsJN]
gi|385209973|ref|ZP_10036841.1| GTP-binding protein TypA/BipA [Burkholderia sp. Ch1-1]
gi|187714825|gb|ACD16049.1| GTP-binding protein TypA [Burkholderia phytofirmans PsJN]
gi|385182311|gb|EIF31587.1| GTP-binding protein TypA/BipA [Burkholderia sp. Ch1-1]
Length = 608
Score = 835 bits (2157), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/600 (64%), Positives = 492/600 (82%), Gaps = 4/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+ TFR NQ I R+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQTATFRDNQQIAERVMDSNDIEKERGITILSKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL AT+EQLDFP++Y S L+GYA R+G+M PLFE
Sbjct: 129 KVDRPGARIDWVINQTFDLFDKLGATDEQLDFPIVYASGLNGYAGLTPDVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+L++VPV + + PLQLQI SL+YSSY+G+IG+GRI G IK V + +GPD
Sbjct: 189 AVLQHVPVRPADPSAPLQLQITSLDYSSYVGRIGVGRITRGTIKPGMSVAVRSGPDGAIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V+ A +GDIVLI GIEEI IG TIC P +P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVDSAEAGDIVLINGIEEIGIGVTICAPEQPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV + D++ +EV+GRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRVKETG-DETTFEVAGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ ++G +EPYENL VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMTEVDGVKHEPYENLTVDMEDGHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRI +RGLIGFQ+EF+TLTRGTGL+SH F+ Y P + +G+R
Sbjct: 428 LDMASDGRGRTRLEYRISARGLIGFQSEFLTLTRGTGLMSHTFDSYQPVKEGA---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVSPGEPLYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+RSSG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR+LKE+ER+ K
Sbjct: 545 TNVRSSGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRYLKEHERRSASRK 604
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQTATFRDNQQIAERVMDSNDIEKERGITILSKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARIDWV 140
>gi|319941970|ref|ZP_08016291.1| GTP-binding protein TypA/BipA [Sutterella wadsworthensis 3_1_45B]
gi|319804623|gb|EFW01493.1| GTP-binding protein TypA/BipA [Sutterella wadsworthensis 3_1_45B]
Length = 614
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/600 (65%), Positives = 491/600 (81%), Gaps = 8/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL+ +GTFR NQ + R+MDSN IE+ERGITI +KNC++EY G
Sbjct: 9 AIIAHVDHGKTTMVDRLLQCAGTFRANQQVEERVMDSNAIERERGITILAKNCAVEYEGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL G KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALAQGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQ----GNMI 1101
KIDR ARP+WV++ TFDLFDKL ATE+QLDFPVIY SAL+GYA + GNM
Sbjct: 129 KIDRPGARPDWVLNQTFDLFDKLGATEDQLDFPVIYASALNGYAGTTDNVEELKKIGNMR 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
+F+A++KYVPV DN + PL LQI SL+YS+Y+GKIG+GR+ GRI +V IM+GPD
Sbjct: 189 AIFDAVIKYVPVRDDNPDGPLMLQICSLDYSTYVGKIGVGRVHRGRIYPNSEVAIMDGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
P +AKINQI F+GL+R VNEA +GDI+L+TGIEE+ IG+TI D P LPML +D
Sbjct: 249 GTPRRAKINQILEFEGLERKEVNEAQAGDIILVTGIEELNIGTTITDKDHPEALPMLTVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI+ RL+ E+K+N+ +R+ + D++++E++GRG
Sbjct: 309 EPTLTMNFQVNTSPLAGREGKFVTSRQIRERLERELKSNVAMRM-RPTADETVWEIAGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VSRPRV+ K ++G EPYE L VD+EE +QG +M++L R
Sbjct: 368 ELHLTILLENMRREGYELAVSRPRVVIKEVDGVKMEPYELLTVDVEEEHQGAVMEELGRR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
GDL+++E + K RVRLEYRIP+RGLIGFQ+ F+T+ RGTG++SHVF++Y D
Sbjct: 428 RGDLQDMEPDGKGRVRLEYRIPARGLIGFQSMFMTMCRGTGIMSHVFDDYGTIKTG---D 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G+RR+GV+ISQ G AVAY+LWK+Q+RGRLF+N D +YEGMIIG HSR+ND++VNPI+
Sbjct: 485 VGERRSGVIISQDDGAAVAYALWKIQERGRLFVNPGDELYEGMIIGEHSRENDIVVNPIR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTNIR+SGSDEAI+L+ P+K+TLE A+EFINDDELVEITPK IRLRKR+LK+ ERK+
Sbjct: 545 GKQLTNIRASGSDEAIRLVPPVKLTLESAVEFINDDELVEITPKTIRLRKRYLKDFERKR 604
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + F + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDRLLQCAGTFRANQQVEERVMDSNAIERERGITILAKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 VHINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALAQGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|358637807|dbj|BAL25104.1| GTP-binding protein [Azoarcus sp. KH32C]
Length = 605
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/596 (65%), Positives = 492/596 (82%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI +KNC+I+Y T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVSERVMDSNDLEKERGITILAKNCAIQYGET 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +RP+WV++ TFDLFDKL ATEEQLDFPV+Y SAL+G+A ++ +M PL+E
Sbjct: 129 KIDRPGSRPDWVINQTFDLFDKLGATEEQLDFPVVYASALNGFAMLDAATPGTDMKPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP + +S PLQLQ+ SL+YS+Y+G++GIGRI GRI+ Q+VV+M G D+
Sbjct: 189 AILEHVPQPEVDSEGPLQLQVCSLDYSTYIGQLGIGRIKRGRIRPNQEVVVMYG-DENRG 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAKI Q+ FKGL+R A +GDIVL++GI+++ IG TICDP G+ + +DEPTL
Sbjct: 248 KAKIGQVLTFKGLERSQAESAEAGDIVLVSGIDQVNIGVTICDPDGLEGMKPIAVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN+SPLAGREGKF+T+RQI+ RL+ E+ N+ LRV +D ++EVSGRGELHL
Sbjct: 308 TMNFMVNSSPLAGREGKFVTSRQIRERLEKELLKNVALRVNYT-NDSDVFEVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+E++V RPRV+F+ ++G EPYE L VD+EE +QG +M++L R G+L
Sbjct: 367 TILLENMRREGFEMAVGRPRVVFRDIDGVKCEPYEMLTVDVEEEHQGGVMEELGRRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + K R RLEYRIP+RGLIGFQ EF+TLTRGTGL SHVF++Y P +G+R
Sbjct: 427 QDMQSDGKGRTRLEYRIPARGLIGFQGEFLTLTRGTGLASHVFDDYGPLAGA----MGER 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G+AVAY+LWKLQDRGR+F+ HND VYEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 483 RNGVLISQDDGQAVAYALWKLQDRGRMFVTHNDPVYEGMIIGIHSRDNDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++LI I++TLE AIEFI DDELVEITPK+IRLRKR+L ENERK+
Sbjct: 543 TNVRASGTDEAVRLIPAIQLTLESAIEFIADDELVEITPKSIRLRKRYLTENERKR 598
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E +++ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVSERVMDSNDLEKERGITILAKNCAIQYGE 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|56479081|ref|YP_160670.1| GTP-binding protein [Aromatoleum aromaticum EbN1]
gi|56315124|emb|CAI09769.1| GTP-binding protein with elongation factor-like domain [Aromatoleum
aromaticum EbN1]
Length = 605
Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/596 (65%), Positives = 492/596 (82%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI SKNC+I+Y T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVSERVMDSNDLEKERGITILSKNCAIQYGDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ TFDLFDKL ATEEQLDFPV+Y S L+G+A + +M PL+E
Sbjct: 129 KIDRPGARPDWVINHTFDLFDKLGATEEQLDFPVVYASGLNGFAMLDLAKPSTDMKPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP + +S+ PLQLQ+ SL+YS+Y+G++GIGRI GRI+ Q+VV+M G D+
Sbjct: 189 AILEHVPQPEVDSDGPLQLQVCSLDYSTYIGQLGIGRIKRGRIRPNQEVVVMYG-DENRG 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAKI Q+ F+GL+R A +GDIVL++G++++ IG T+CDP K G+ + +DEPTL
Sbjct: 248 KAKIGQVLTFEGLERTQTESAEAGDIVLVSGVDQVNIGVTLCDPEKLEGMEPIAVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN+SPLAGREGKF+T+RQI+ RL+ E+ N+ LRV + +D ++ VSGRGELHL
Sbjct: 308 TMNFMVNSSPLAGREGKFVTSRQIRERLERELLKNVALRV-EYTNDSDVFLVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+EL+V RPRV+F+ ++G EPYE L VD+EE +QG +M++L R G+L
Sbjct: 367 TILLENMRREGFELAVGRPRVVFREVDGVKCEPYEMLTVDVEEEHQGGVMEELGRRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + K RVRLEYRIP+RGLIGFQ EF+TLTRG GL SHVF+ Y P +G+R
Sbjct: 427 QDMQSDSKGRVRLEYRIPARGLIGFQGEFLTLTRGIGLASHVFDGYGPMAGP----MGER 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LWKLQDRGR+F+ HND VYEG+IIG+HSRDNDL+VNPIK KQL
Sbjct: 483 RNGVLISQDNGHAVAYALWKLQDRGRMFLTHNDPVYEGIIIGVHSRDNDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++LI PI++TLE AIEFI DDELVEITPK+IRLRKR+L ENERK+
Sbjct: 543 TNVRSSGTDEAVRLIPPIQLTLESAIEFIADDELVEITPKSIRLRKRYLTENERKR 598
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E +++ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVSERVMDSNDLEKERGITILSKNCAIQYGD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|334130483|ref|ZP_08504280.1| GTP-binding protein TypA/BipA [Methyloversatilis universalis FAM5]
gi|333444592|gb|EGK72541.1| GTP-binding protein TypA/BipA [Methyloversatilis universalis FAM5]
Length = 604
Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/598 (65%), Positives = 488/598 (81%), Gaps = 6/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +Q ++ R+MDS +IEKERGITI +KNC+IEY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFASHQQVSERVMDSGDIEKERGITILAKNCAIEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVTRKAL G KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALAQGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ TFDLFDKL AT+EQLDFPVIY S L+G+A EN + + +M PLFE
Sbjct: 129 KIDRPGARPDWVINHTFDLFDKLGATDEQLDFPVIYASGLNGFAVENLEDERKDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILK+VP + + PLQLQI SL+YS+Y+G++GIGRI GRIK Q+VV+ G +++
Sbjct: 189 AILKHVPQPEVDEEAPLQLQICSLDYSTYIGQLGIGRIKRGRIKPNQEVVVYYGEENR-G 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAK+ Q+ FKGLDR + A +GDIVL++GIE++ IG TICDP P + + +DEPTL
Sbjct: 248 KAKVGQVLTFKGLDRTQADSASAGDIVLVSGIEQVNIGVTICDPEAPEPMKPIAVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGKF+T+RQI+ RL+ E+ N+ LRV + +D ++ VSGRGELHL
Sbjct: 308 TMNFMVNGSPLAGREGKFVTSRQIRERLEKELLKNVALRV-EYTNDSDVFLVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V RPRV+FK ++G EPYE L VD+EE +QG +M++L R G++
Sbjct: 367 TILLENMRREGYELAVGRPRVVFKDIDGVKCEPYEMLTVDVEEGHQGGVMEELGRRRGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVR+EYRIP+RGLIGFQ EF+TLTRGTGL SHVF++Y P + +R
Sbjct: 427 TDMQPDGKGRVRIEYRIPARGLIGFQGEFLTLTRGTGLASHVFDDYGPMAGP----MSER 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G+AVAY+LW LQDRGR+F+N D++YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 483 RNGVLISQNDGEAVAYALWNLQDRGRMFVNPGDVLYEGMIIGIHSRDNDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA++LI PI +TLE AIEFI DDELVEITPKNIRLRKR LKE+ERK+ L
Sbjct: 543 TNVRASGTDEAVRLIPPIALTLESAIEFIADDELVEITPKNIRLRKRHLKEHERKRAL 600
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F+ +++ + + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFASHQQVSERVMDSGDIEKERGITILAKNCAIEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTRKALAQGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|170694412|ref|ZP_02885565.1| GTP-binding protein TypA [Burkholderia graminis C4D1M]
gi|170140546|gb|EDT08721.1| GTP-binding protein TypA [Burkholderia graminis C4D1M]
Length = 608
Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/600 (64%), Positives = 487/600 (81%), Gaps = 4/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+ TFR NQ + R+MDSN+IEKERGITI SKNC++EY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQTATFRDNQQVAERVMDSNDIEKERGITILSKNCAVEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVE TRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVERLDAATRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLFDKL AT+EQLDFP++Y S L+GYA R+G+M PLFE
Sbjct: 129 KVDRPGARIDWVINQTFDLFDKLGATDEQLDFPIVYASGLNGYAGLTPDVREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+LK+VPV + PLQLQI SL+YSSY+G+IG+GRI GRIK V + +GPD
Sbjct: 189 AVLKHVPVRAADPEGPLQLQITSLDYSSYVGRIGVGRITRGRIKPGMAVAVRSGPDGAIL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ FKGL+RV V A +GDIVLI GIEEI IG TIC P +P LPM+ +DEPTL
Sbjct: 249 NRKINQVLSFKGLERVQVESAEAGDIVLINGIEEIGIGVTICSPEQPEALPMITVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF+VN+SPLAGREGKF+T+RQI++RL E+ +N+ LRV + D++ +EV+GRGELHL
Sbjct: 309 TMNFLVNSSPLAGREGKFVTSRQIRDRLMKELNHNVALRVKETG-DETTFEVAGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRV+ + ++G +EPYENL VD+E+ +QG +M++L R G++
Sbjct: 368 TILVENMRREGYELAVSRPRVVMQEIDGVKHEPYENLTVDMEDAHQGGVMEELGRRKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R RLEYRI +RGLIGFQ+EF+TLTRGTGL+SH F+ Y P + +G+R
Sbjct: 428 LDMASDGRGRTRLEYRISARGLIGFQSEFLTLTRGTGLMSHTFDSYQPVKEGA---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LWKLQDRGR+F++ + +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 485 RNGVLISQDDGAAVAYALWKLQDRGRMFVSPGEPLYEGMIIGIHSRDNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+RSSG+DEA++L+ PI+++LEYA+EFI+DDELVE+TP++IRLRKR+LKE+ER+ K
Sbjct: 545 TNVRSSGTDEAVRLVPPIQMSLEYAVEFIDDDELVEVTPQSIRLRKRYLKEHERRSASRK 604
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQTATFRDNQQVAERVMDSNDIEKERGITILSKNCAVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A + + TR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVERLDAATRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ +D +
Sbjct: 128 NKVDRPGARIDWV 140
>gi|348618049|ref|ZP_08884582.1| GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A)
[Candidatus Glomeribacter gigasporarum BEG34]
gi|347816754|emb|CCD29245.1| GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A)
[Candidatus Glomeribacter gigasporarum BEG34]
Length = 609
Score = 819 bits (2116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/596 (64%), Positives = 483/596 (81%), Gaps = 2/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D +LRQSG FR+NQ + R+MDSN +EKERGITI +KNC+IEY GT
Sbjct: 11 AIIAHVDHGKTTLVDQMLRQSGAFRENQTVAERVMDSNALEKERGITILAKNCAIEYLGT 70
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL G + IVVVN
Sbjct: 71 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALAQGLQSIVVVN 130
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFDKL A+E+QLDFPVIY S LHGYA +++ R G + PLFE
Sbjct: 131 KIDRPGARADWVINQTFDLFDKLGASEQQLDFPVIYASGLHGYAGHDARVRTGTLQPLFE 190
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL+YVPV + N PLQLQI +L+YSSY+G+IGIGRI G + Q V + GP
Sbjct: 191 AILQYVPVRTADPNGPLQLQIAALDYSSYVGRIGIGRISRGALNKGQTVALRFGPGGDVL 250
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQI FKGL+RV V A +GDIVL+ GIEEI IG+T+CD S P LPM+ IDEPTL
Sbjct: 251 PRKINQIHQFKGLERVEVERAQAGDIVLVNGIEEIGIGATLCDLSNPEALPMIAIDEPTL 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SPLAGREGKF+T+RQ++ RL E+ +N+ LRV ++ D++++EVSGRGELHL
Sbjct: 311 TMNFCVNTSPLAGREGKFVTSRQLRERLMRELNHNVALRV-KDTEDETVFEVSGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYEL+VSRPRV+ + +NG +EP+E L VDIE+ +QG +M+++ R G+L
Sbjct: 370 TILIENMRREGYELAVSRPRVVMREINGIQHEPFELLTVDIEDAHQGGVMEEIGRRKGEL 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + R+RLEYRI +RGLIG Q+ F+TLTRGTGL+SH+F+ YAP S +G R
Sbjct: 430 LDMASDAQGRIRLEYRIAARGLIGLQSVFMTLTRGTGLMSHIFDAYAPVAANSG-GIGAR 488
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNG LISQ G AVAY+LWKLQ+RGR+F++ D +YEGMIIGIHSR+NDL+VNP++EK+L
Sbjct: 489 RNGALISQDDGAAVAYALWKLQERGRMFVHPGDTLYEGMIIGIHSRENDLVVNPVREKKL 548
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++G DE I L+ P+ ++LEYA EF++DDELVE+TP++IRLRKRFLKE+ER++
Sbjct: 549 TNIRAAGKDEHIDLVPPVPLSLEYAAEFVDDDELVEVTPQSIRLRKRFLKEHERRR 604
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDQMLRQSGAFRENQTVAERVMDSNALEKERGITILAKNCAIEYLG 69
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 70 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALAQGLQSIVVV 129
Query: 176 NKIDKLDINLDRI 188
NKID+ D +
Sbjct: 130 NKIDRPGARADWV 142
>gi|119898290|ref|YP_933503.1| GTP-binding elongation factor [Azoarcus sp. BH72]
gi|119670703|emb|CAL94616.1| GTP-binding elongation factor [Azoarcus sp. BH72]
Length = 605
Score = 818 bits (2112), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/592 (65%), Positives = 484/592 (81%), Gaps = 6/592 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ + R+MDSN+IEKERGITI SKNC+I+Y T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRDNQQVAERVMDSNDIEKERGITILSKNCAIQYGET 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ TFDLFDKL ATEEQLDFPVIY S L+G+A EN + +M PLFE
Sbjct: 129 KIDRPGARPDWVINHTFDLFDKLGATEEQLDFPVIYASGLNGFAVENIDDERKDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILK+VP + +++ PLQLQ+ SL+YS+Y+G++GIGRI GRIK Q++V+M G D+
Sbjct: 189 AILKHVPPPEVDADGPLQLQVCSLDYSTYMGQLGIGRIKRGRIKPNQELVVMYG-DENRG 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K K++QI FKGL+R A +GDIVL+ GI+++ IG T+CDP GL + +DEPTL
Sbjct: 248 KGKVSQILTFKGLERSPAESAEAGDIVLVAGIQQVNIGVTLCDPDCLEGLTPIAVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN+SPLAGREGKF+T+RQI+ RL+ E+ N+ LRV D ++EVSGRGELHL
Sbjct: 308 TMNFMVNSSPLAGREGKFVTSRQIRERLEKELLKNVALRVNYTG-DSDVFEVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V RPRV++K ++G EPYE L VD+EE +QG +M++L R G+L
Sbjct: 367 TILLENMRREGYELAVGRPRVVYKEIDGVKCEPYEMLTVDVEEDHQGGVMEELGRRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + K RVRLEYRIP+RGLIGFQ EF+T+TRGTGL SHVF++Y+P + +R
Sbjct: 427 QDMQPDGKGRVRLEYRIPARGLIGFQGEFLTMTRGTGLASHVFDDYSPMAGS----MAER 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G+AVAY+LW LQDRGR+F++ + +YEGMIIGIH+RDNDL+VNPIK KQL
Sbjct: 483 RNGVLISQNDGEAVAYALWNLQDRGRMFVSPGEALYEGMIIGIHTRDNDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKEN 1517
TN+R+SG+DEA++LI PI +TLE AIEFI DDELVEITPKNIRLRKR LKE
Sbjct: 543 TNVRASGTDEAVRLIPPIALTLESAIEFIADDELVEITPKNIRLRKRHLKET 594
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRDNQQVAERVMDSNDIEKERGITILSKNCAIQYGE 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|34497865|ref|NP_902080.1| GTP-binding protein TypA [Chromobacterium violaceum ATCC 12472]
gi|34103721|gb|AAQ60082.1| GTP-binding protein TypA [Chromobacterium violaceum ATCC 12472]
Length = 605
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/596 (63%), Positives = 492/596 (82%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTFR+NQ ++ R+MDSN++EKERGITI +KN +I Y G
Sbjct: 9 AIIAHVDHGKTTLVDQLLKQSGTFRENQQVDERVMDSNDLEKERGITILAKNTAINYEGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DAVEGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +RP+WVVD TFDLFDKL AT+EQLDFP+IY S L G+A NM PLFE
Sbjct: 129 KIDRPGSRPDWVVDQTFDLFDKLGATDEQLDFPIIYASGLTGFAKHELDEESDNMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+LK+VP + + PLQLQI +L+YS+Y G++G+GRIL+GRIK Q VV+MN D++
Sbjct: 189 TVLKHVPTPAGSPDAPLQLQISALDYSTYTGRLGLGRILNGRIKPGQQVVVMNH-DEQVA 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+INQ+ FKGL+RV V EA +GDIV+I+GIE+I IG TICD +P GLPML++DEPTL
Sbjct: 248 SGRINQVLGFKGLERVEVQEAEAGDIVIISGIEDIGIGVTICDKEQPVGLPMLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN+SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 308 TMDFMVNSSPLAGTEGKFVTSRQIRDRLTKELLTNVALRV-EDTGDADVFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+E++V++PRV+FK +NG+ EPYENL +D+E+ +QG +M+++ R G+L
Sbjct: 367 TILLENMRREGFEMAVAKPRVVFKEINGQKCEPYENLTIDLEDDHQGGVMEEIGRRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ++F+T+TRGTGL+SHVF++YAP K DL R
Sbjct: 427 TNMESDGNGRTRLEYHIPARGLIGFQSDFMTMTRGTGLMSHVFDDYAPV----KPDLPGR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G+AVAY+LW L+DRGR+F++ D +YEGMIIGIHSRDNDL+VNPIK K+L
Sbjct: 483 HNGVLISQEHGEAVAYALWNLEDRGRMFVSPGDKLYEGMIIGIHSRDNDLVVNPIKGKKL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITPK+IR+RKR+L+E+ER+K
Sbjct: 543 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPKSIRIRKRYLQEHERRK 598
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLKQSGTFRENQQVDERVMDSNDLEKERGITILAKNTAINYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 68 VHINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|394988531|ref|ZP_10381366.1| TypA [Sulfuricella denitrificans skB26]
gi|393791910|dbj|GAB71005.1| TypA [Sulfuricella denitrificans skB26]
Length = 602
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/596 (64%), Positives = 486/596 (81%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL Q+GTF +Q+I R+MDSN+ EKERGITI +KN S+EY G
Sbjct: 9 AIIAHVDHGKTTLVDKLLHQAGTFASHQHIAERVMDSNDQEKERGITILAKNTSVEYEGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ TF+LFDKL AT++QLDFPV+Y SA++GYA +M LF+
Sbjct: 129 KIDRPGARPDWVVNQTFELFDKLGATDDQLDFPVVYASAINGYAMLELDKPCDHMRALFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+LK+V K + + PLQLQI +L+YSS++G+IGIGR+ +GRIK Q VV+MNGPD P
Sbjct: 189 TVLKHVEPPKGDPDAPLQLQIAALDYSSFVGRIGIGRVANGRIKPGQQVVVMNGPDGTPK 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AKINQ+ F GL+RV ++EA +GDI+LITGIEE+ IG TICD P GLP+L +DEPTL
Sbjct: 249 NAKINQVMGFHGLERVQLDEAQAGDIILITGIEEVGIGVTICDKENPQGLPLLLVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+NF VN SPLAG EGKF+T+RQ+++RL E+ N+ L+V + + DS + VSGRGELHL
Sbjct: 309 NMNFRVNTSPLAGTEGKFVTSRQLRDRLQKELLINVALKVEETEDADS-FVVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
T+L+ENMRREGYEL+V +PRV+ K +NG EPYE L +D+EE NQG M++L R GDL
Sbjct: 368 TVLLENMRREGYELAVGKPRVVMKEINGVKCEPYEALTLDVEEANQGAAMEELGRRRGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + RVRLEYRIP+RGLIGFQ EF+TLTRGTG++SHVF+EYA + + D+ R
Sbjct: 428 QDMQPDGHGRVRLEYRIPARGLIGFQGEFMTLTRGTGVMSHVFDEYA----EVRADIPGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G+AVAY+LWKL+DRG++F++ D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 484 RNGVLISQDNGEAVAYALWKLEDRGKMFVSPGDKLYEGMIIGIHSRDNDLVVNPIKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L +PIK+TLE A+EFI+DDELVEITPK+IR+RKRFL ENERK+
Sbjct: 544 TNVRSSGTDEAVRLTTPIKMTLESAVEFIDDDELVEITPKSIRIRKRFLTENERKR 599
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + F+ I + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLHQAGTFASHQHIAERVMDSNDQEKERGITILAKNTSVEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 VHINIVDTPGHADFGGEVERVLGMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|226941068|ref|YP_002796142.1| TypA [Laribacter hongkongensis HLHK9]
gi|226715995|gb|ACO75133.1| TypA [Laribacter hongkongensis HLHK9]
Length = 605
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/599 (63%), Positives = 486/599 (81%), Gaps = 5/599 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL Q+GTFR NQ+I R+MDSN++E+ERGITI +KN ++ YNGT
Sbjct: 9 AIIAHVDHGKTTLVDKLLHQAGTFRDNQHIAERVMDSNDLERERGITILAKNTAVNYNGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVDGVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD TFDLFDKL AT+EQLDFPV+Y S L+G+A +M PLFE
Sbjct: 129 KIDRPGARPDWVVDQTFDLFDKLGATDEQLDFPVVYASGLNGFAKMELDEESDDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+++V K + + PLQLQI +L+YS+Y G+IG+GR+ GRI+ Q VV+M G D +P
Sbjct: 189 TIVRHVEPPKGSPDEPLQLQISALDYSTYTGRIGVGRVARGRIRPGQQVVVMAGVDGQPK 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+NQ+ F+GL+RV V EA +GDI+LI GIE+I IG TIC+ P LPML++DEPTL
Sbjct: 249 AAKVNQVLGFQGLERVQVEEAEAGDIILINGIEDIGIGVTICERDNPEALPMLSVDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VNNSPLAG EGKF+T+RQ+++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 309 TMNFQVNNSPLAGTEGKFVTSRQLRDRLQKELLTNVALRV-EDTGDADVFLVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYELSVS+PRV+ K ++GE EPYE L VD+E+ NQG +M++L R G+L
Sbjct: 368 TILLENMRREGYELSVSKPRVVIKEIDGEKCEPYEMLTVDVEDDNQGAVMEELGRRRGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K R RLEYRIP+RGLIGFQ EF+T+TRGTG+++HVF+EYAP K D+ R
Sbjct: 428 QDMVSDGKGRTRLEYRIPARGLIGFQGEFLTMTRGTGIMAHVFDEYAPM----KPDMPGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ +G AVAY+LW L+DRGR+F++ + +YEGMIIGIHSR+NDL+VNPIK K+L
Sbjct: 484 RNGVLISQENGDAVAYALWNLEDRGRMFVSPGEKLYEGMIIGIHSRENDLVVNPIKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLH 1524
TN+R+SG+DEA++L PI++TLEYA+EFI+DDELVEITP++IR+RKR L E++RKK L
Sbjct: 544 TNVRASGTDEAVRLTPPIRLTLEYAVEFIDDDELVEITPQSIRVRKRHLNEHDRKKALR 602
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + F + I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLHQAGTFRDNQHIAERVMDSNDLERERGITILAKNTAVNYNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLGMVDGVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|429462709|ref|YP_007184172.1| GTP-binding protein [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811536|ref|YP_007447991.1| GTP-binding protein [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338223|gb|AFZ82646.1| GTP-binding protein [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776694|gb|AGF47693.1| GTP-binding protein [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 604
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/596 (64%), Positives = 489/596 (82%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSG FR NQN+ R+MDSN +EKERGITI SKNCS+EYN T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGVFRNNQNVTKRVMDSNVLEKERGITILSKNCSVEYNDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+NIIDTPGHADFGGEVER+LSMV+ VLLL+DAVEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 YVNIIDTPGHADFGGEVERVLSMVEGVLLLVDAVEGPMPQTVFVTRKALSLGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP++V++ F+LFD+L ATEEQLDFPV+Y S L GY++ + R G+M LFE
Sbjct: 129 KIDKPGARPDFVINEVFELFDRLGATEEQLDFPVVYASGLSGYSSSDPDVRSGDMSYLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I KYVP +++S+ P Q+QI SL+Y+SY+GKIGIG+I G + DV + G
Sbjct: 189 IISKYVPKPQNDSDGPFQMQIASLDYNSYVGKIGIGKIHRGVLYPSMDVALKMGESGPVL 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K++INQ+ F GLDRV V +A +GDIVLI GIE++ IG TI DP + LP+L IDEPTL
Sbjct: 249 KSRINQVLKFSGLDRVSVEKAEAGDIVLINGIEDVEIGITIADPLNIDALPVLKIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAG+EGKF+T+RQI++RLD E+K+N+ L+V + DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGKEGKFVTSRQIRDRLDLELKSNVALKVRETD-DDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYELSVSRPRV++K ++G +EP+E+L + ++++ QG +M+++ R GDL
Sbjct: 368 TILLETMRREGYELSVSRPRVVYKDIDGVKHEPFEDLTLYVDDVYQGAVMEEVGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + R RLEY IP+R LIGFQN+F+++TRG+GL+SHVF EYAPFY S L R
Sbjct: 428 QNMIPDNHGRTRLEYVIPARSLIGFQNDFMSITRGSGLMSHVFREYAPFYEGS---LSNR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQY+G++VAY+LWKLQDRGR+FI + +YEGMIIG+HSRDNDL+VNP++EKQL
Sbjct: 485 RNGVLISQYAGESVAYALWKLQDRGRMFIKPGESLYEGMIIGVHSRDNDLVVNPVREKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI+L+ PI +TLEYAIEFI DDELVEITPK+IRLRKR+L+E+ER++
Sbjct: 545 TNVRASGTDEAIRLVPPINLTLEYAIEFIEDDELVEITPKSIRLRKRYLQEHERRR 600
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + VF +T+ + NV+ IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGVFRNNQNVTKRVMDSNVLEKERGITILSKNCSVEYND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + + V+L+V A +G MPQT A G+ IV +
Sbjct: 68 TYVNIIDTPGHADFGGEVERVLSMVEGVLLLVDAVEGPMPQTVFVTRKALSLGLKPIVVV 127
Query: 176 NKIDK 180
NKIDK
Sbjct: 128 NKIDK 132
>gi|217970585|ref|YP_002355819.1| GTP-binding protein TypA [Thauera sp. MZ1T]
gi|217507912|gb|ACK54923.1| GTP-binding protein TypA [Thauera sp. MZ1T]
Length = 605
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/596 (64%), Positives = 486/596 (81%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ + R+MDS +IEKERGITI SKNC+I+Y T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSGDIEKERGITILSKNCAIQYGDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVTRKAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ TFDLFDKL ATEEQLDFPVIY S L+G+A N + +M PLFE
Sbjct: 129 KIDRPGARPDWVINHTFDLFDKLGATEEQLDFPVIYASGLNGFAVINEGDERKDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP + ++N PLQ+Q+ SL+YS+Y+G++GIGRI G ++ Q+VV+M G +++
Sbjct: 189 AILEHVPAPEVDANGPLQIQVCSLDYSTYMGQLGIGRIKRGSVRPNQEVVVMYGEENR-G 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K K++QI F+GL+R A +GDIVLI GI+++ IG T+CDP G+ + +DEPTL
Sbjct: 248 KGKVSQILTFEGLERKPSELAEAGDIVLIAGIQQVNIGVTLCDPECLEGMKPIAVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAGREGK++T+RQI+ RL+ E+ N+ LRV D ++EVSGRGELHL
Sbjct: 308 TMNFMVNTSPLAGREGKYVTSRQIRERLEKELLKNVALRVNYTG-DSDVFEVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V RPRV++K ++G EPYE L VD+EE +QG +M++L R G+L
Sbjct: 367 TILLENMRREGYELAVGRPRVVYKEIDGVKCEPYEMLTVDVEEDHQGSVMEELGRRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + RVRLEYRIP+RGLIGFQ EF+T+TRGTGL SHVF++Y P + +R
Sbjct: 427 QDMQPDGRGRVRLEYRIPARGLIGFQGEFLTMTRGTGLASHVFDDYGPMAGA----MAER 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G AVAY+LW LQDRGR+F++ + +YEGMIIGIH+RDNDL+VNPIK KQL
Sbjct: 483 RNGVLISQNDGDAVAYALWNLQDRGRMFVSPGEALYEGMIIGIHTRDNDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++LI+PI++TLE AIEFI DDELVEITPKNIRLRKR LKE +RK+
Sbjct: 543 TNVRASGTDEAVRLITPIQLTLESAIEFIADDELVEITPKNIRLRKRHLKETDRKR 598
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSE----------AGGITQHIG----AYNVVTNHGS 117
+ I+ HVDHGKT+L+D + + + F E +G I + G + N +G
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVAERVMDSGDIEKERGITILSKNCAIQYGD 67
Query: 118 --ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTRKALALGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|347540085|ref|YP_004847510.1| GTP-binding protein TypA [Pseudogulbenkiania sp. NH8B]
gi|345643263|dbj|BAK77096.1| GTP-binding protein TypA [Pseudogulbenkiania sp. NH8B]
Length = 611
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/596 (63%), Positives = 490/596 (82%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+NQ + R+MDSN++EKERGITI +KN +I Y G
Sbjct: 18 AIIAHVDHGKTTLVDQLLRQAGTFRENQQVVERVMDSNDLEKERGITILAKNTAINYEGV 77
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DAVEGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 78 HINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLRPIVVIN 137
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD TFDLFDKL AT+EQLDFP+IY S L G+A + NM PLFE
Sbjct: 138 KIDRPGARPDWVVDQTFDLFDKLGATDEQLDFPIIYASGLSGFAKYELEEESDNMRPLFE 197
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+LK+VPV + + PLQLQI +L+YS+Y G++G+GR+L+GRIK Q VV+MN +++
Sbjct: 198 TVLKHVPVPAGDPDAPLQLQISALDYSTYTGRLGLGRVLNGRIKPGQVVVVMNH-EEQTA 256
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV V EA +GDIV+I+G+E+I IG TICD P GLP+L +DEPTL
Sbjct: 257 QGRINQVLGFKGLERVEVPEAEAGDIVIISGLEDIGIGVTICDRDAPVGLPVLGVDEPTL 316
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D I+ VSGRGELHL
Sbjct: 317 TMDFMVNTSPLAGTEGKFVTSRQIRDRLTKELLTNVALRV-EDTEDADIFRVSGRGELHL 375
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+E++V +PRV+FK +NGE EPYENL +D+E+ +QG +M++L R G+L
Sbjct: 376 TILLENMRREGFEMAVGKPRVVFKEINGEKCEPYENLTIDLEDGHQGAVMEELGRRRGEL 435
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + + R RLEY IP+RGLIGFQ +F+T+TRGTGL+SHVF++YAP K D+ R
Sbjct: 436 TNMESDGQGRTRLEYHIPARGLIGFQGDFLTMTRGTGLMSHVFDDYAPV----KPDMPGR 491
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ +G+AVAY+LW L+DRGR+F++ D +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 492 HNGVLISQDNGEAVAYALWNLEDRGRMFVSPGDKLYEGMIIGIHSRDNDLVVNPLKGKKL 551
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDE+VEITP+ IRLRKR+L+E+ER++
Sbjct: 552 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDEIVEITPQTIRLRKRYLQEHERRR 607
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E + + + N + IT L
Sbjct: 17 IAIIAHVDHGKTTLVDQLLRQAGTFRENQQVVERVMDSNDLEKERGITILAKNTAINYEG 76
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 77 VHINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLRPIVVI 136
Query: 176 NKIDK 180
NKID+
Sbjct: 137 NKIDR 141
>gi|224824133|ref|ZP_03697241.1| GTP-binding protein TypA [Pseudogulbenkiania ferrooxidans 2002]
gi|224603552|gb|EEG09727.1| GTP-binding protein TypA [Pseudogulbenkiania ferrooxidans 2002]
Length = 602
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/596 (63%), Positives = 490/596 (82%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR+NQ + R+MDSN++EKERGITI +KN +I Y G
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQAGTFRENQQVVERVMDSNDLEKERGITILAKNTAINYEGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DAVEGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD TFDLFDKL AT+EQLDFP+IY S L G+A + NM PLFE
Sbjct: 129 KIDRPGARPDWVVDQTFDLFDKLGATDEQLDFPIIYASGLSGFAKYELEEESDNMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+LK+VPV + + PLQLQI +L+YS+Y G++G+GR+L+GRIK Q VV+MN +++
Sbjct: 189 TVLKHVPVPAGDPDAPLQLQISALDYSTYTGRLGLGRVLNGRIKPGQVVVVMNH-EEQTA 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV V EA +GDIV+I+G+E+I IG TICD P GLP+L +DEPTL
Sbjct: 248 QGRINQVLGFKGLERVEVPEAEAGDIVIISGLEDIGIGVTICDRDAPVGLPVLGVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D I+ VSGRGELHL
Sbjct: 308 TMDFMVNTSPLAGTEGKFVTSRQIRDRLTKELLTNVALRV-EDTEDADIFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+E++V +PRV+FK +NGE EPYENL +D+E+ +QG +M++L R G+L
Sbjct: 367 TILLENMRREGFEMAVGKPRVVFKEINGEKCEPYENLTIDLEDGHQGAVMEELGRRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + + R RLEY IP+RGLIGFQ +F+T+TRGTGL+SHVF++YAP K D+ R
Sbjct: 427 TNMESDGQGRTRLEYHIPARGLIGFQGDFLTMTRGTGLMSHVFDDYAPV----KPDMPGR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ +G+AVAY+LW L+DRGR+F++ D +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 483 HNGVLISQDNGEAVAYALWNLEDRGRMFVSPGDKLYEGMIIGIHSRDNDLVVNPLKGKKL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDE+VEITP+ IRLRKR+L+E+ER++
Sbjct: 543 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDEIVEITPQTIRLRKRYLQEHERRR 598
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQAGTFRENQQVVERVMDSNDLEKERGITILAKNTAINYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 68 VHINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|124267107|ref|YP_001021111.1| GTP-binding elongation factor protein [Methylibium petroleiphilum
PM1]
gi|124259882|gb|ABM94876.1| putative GTP-binding elongation factor protein [Methylibium
petroleiphilum PM1]
Length = 610
Score = 808 bits (2088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/596 (64%), Positives = 482/596 (80%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+N+ + R+MDSN+IEKERGITI SKNC++E+ GT
Sbjct: 14 AIIAHVDHGKTTLVDQLLRQSGTFRENEKVAERVMDSNDIEKERGITILSKNCAVEWKGT 73
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+NI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 74 HVNIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 133
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP++V++ATFDLFDKL ATEEQLDFP+IY S L+G+A+ NM PLF+
Sbjct: 134 KVDRPGARPDYVINATFDLFDKLGATEEQLDFPIIYASGLNGWASTTPGEVGTNMAPLFD 193
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL++VP H+ + PLQLQI SL+YS+++G+IGIGRI G +K +QDV + +G D P
Sbjct: 194 AILQHVPPHEGDPEGPLQLQICSLDYSTFVGRIGIGRINQGTLKPMQDVAVFSGEDSIPF 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA++NQ+ F GL+RV EA GDIVLI GIE+I IG T+ D P LPML +DEPTL
Sbjct: 254 KARVNQVLKFDGLERVQATEAGPGDIVLINGIEDIGIGVTLTDIDDPVPLPMLEVDEPTL 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VNNSPLAGREGKF+T+RQ+++RLD E+++N+ LRV ++ +D I+EVSGRGELHL
Sbjct: 314 TMNFCVNNSPLAGREGKFVTSRQLRDRLDRELQSNVALRV-KDTDEDGIFEVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VS+PRV+F +NGE +EP E + D+EE +QG +MQ L R DL
Sbjct: 373 TILLENMRREGYELAVSKPRVVFHEVNGERHEPMELVTADVEEQHQGGVMQALGLRKADL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + RVRLEYRIP+RGLIGF NEF+ LTRGTGLIS++F+ Y P+ K +L R
Sbjct: 433 VNMEPDGMGRVRLEYRIPARGLIGFSNEFMNLTRGTGLISNIFDGYEPY----KGELEGR 488
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLISQ G+ V Y+L KL DRGR+F+ D VYEGM++GIHSRDNDL+VN ++ KQL
Sbjct: 489 KNGVLISQDDGEIVTYALGKLDDRGRMFVKAGDPVYEGMLVGIHSRDNDLVVNAVRAKQL 548
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN R SG ++AI++ PI ++LEYA+EFI DDELVEITPK+IRLRKR LKE+ERK+
Sbjct: 549 TNFRVSGKEDAIKITPPIILSLEYAVEFIADDELVEITPKSIRLRKRHLKEHERKR 604
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 13 VAIIAHVDHGKTTLVDQLLRQSGTFRENEKVAERVMDSNDIEKERGITILSKNCAVEWKG 72
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 73 THVNIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 132
Query: 176 NKIDK 180
NK+D+
Sbjct: 133 NKVDR 137
>gi|152980794|ref|YP_001354185.1| translation initiation factor IF-2 [Janthinobacterium sp.
Marseille]
gi|166232552|sp|A6T0Y8.1|IF2_JANMA RecName: Full=Translation initiation factor IF-2
gi|151280871|gb|ABR89281.1| translation initiation factor IF-2 [Janthinobacterium sp.
Marseille]
Length = 937
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/539 (69%), Positives = 465/539 (86%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK+LMKLGQM TINQVLDQETAMILVEEMGH AHA+KL+DPE+ LL + ++
Sbjct: 372 MSVKASEVIKHLMKLGQMCTINQVLDQETAMILVEEMGHTAHAAKLDDPEA-LLEQGEEH 430
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 431 ADIEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETPRGMITF 490
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVPL+VAINKIDK
Sbjct: 491 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINKIDK 550
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N+DR+KQ+LI+EQV+PEEYGG SPF+ +SAKTG GI+ LLE + LQAE+LELKAPV
Sbjct: 551 PGANMDRVKQELIAEQVVPEEYGGDSPFVPVSAKTGEGIDALLEQVLLQAEVLELKAPVD 610
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G+++E++LDKG+GPVAT+L+QSGTL+ D+V+AG++YGR+R+ML+ENGK+I EAGP
Sbjct: 611 APARGLVVEAKLDKGRGPVATILVQSGTLKRGDVVLAGSAYGRVRAMLDENGKSITEAGP 670
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +GEE+ V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF ++
Sbjct: 671 SIPVEIQGLTEVPNAGEEVMVMADERKAREIGLFRQGKFRDVKLAKQQAAKLENMFENMG 730
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +IIKTDV GS+E L SL+ LST +V++QV+H AVG I+ESD+NLA+ASKA+
Sbjct: 731 EGEVKNLPMIIKTDVQGSQEALVGSLQKLSTSEVRVQVVHAAVGGISESDVNLAVASKAV 790
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADAS RKLA+ N ++IRY+NIIY+ + EIK+ ++ ++ EK+E LGL EIRQ
Sbjct: 791 IIGFNTRADASARKLAEANGVDIRYYNIIYDAVDEIKAAMSGMLAPEKREQALGLVEIRQ 850
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VILV+KV IAGCY+LEG+ +R S +R+LR+ ++WTGELDSLKRFKD+VKEVKAGFEC
Sbjct: 851 VILVSKVGAIAGCYVLEGVAKRGSSVRLLRDNVVVWTGELDSLKRFKDDVKEVKAGFEC 909
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 444 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETPRGMITF------------ 490
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 491 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINK 547
Query: 1047 IDRSNA 1052
ID+ A
Sbjct: 548 IDKPGA 553
>gi|319944106|ref|ZP_08018384.1| glutathione-disulfide reductase [Lautropia mirabilis ATCC 51599]
gi|319742600|gb|EFV95009.1| glutathione-disulfide reductase [Lautropia mirabilis ATCC 51599]
Length = 620
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/603 (63%), Positives = 480/603 (79%), Gaps = 12/603 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ +N R+MDSN++E+ERGITI +KNC++EY GT
Sbjct: 16 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVNERVMDSNDLERERGITILAKNCAVEYKGT 75
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER LSMVD VLLL+DA++GPMPQTRFVTRKAL LG +PIVVVN
Sbjct: 76 RINIVDTPGHADFGGEVERALSMVDGVLLLVDAMDGPMPQTRFVTRKALALGLRPIVVVN 135
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQG------- 1098
KIDR ARP WVVD TFDLFD+L ATEEQLDFPVIY SAL GYA + +
Sbjct: 136 KIDRPGARPHWVVDQTFDLFDRLGATEEQLDFPVIYASALAGYAVNEVEEAEAAAAAENP 195
Query: 1099 NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMN 1158
+M PLF+AIL VP D+ + PLQ QI +L+YSSY+G+IGIGRI G ++ + V++M+
Sbjct: 196 SMAPLFDAILSRVPARADDPDGPLQFQISALDYSSYVGRIGIGRINRGTLRGGESVLLMH 255
Query: 1159 GPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPML 1218
G + P K+NQ+ F+GL+R +V A +GDIV I GIE+I IGST+C P+ LP+L
Sbjct: 256 GDEKAPVTVKVNQVLRFRGLEREVVPFAQAGDIVAINGIEDIDIGSTLCKIGNPDPLPLL 315
Query: 1219 NIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVS 1278
IDEPTLT+ F+VN SPLAGREGK++T+RQI+ RL+ E++ N+ LRV + D + VS
Sbjct: 316 RIDEPTLTMEFLVNTSPLAGREGKYVTSRQIRERLERELQANVALRV-EFTEDADTFVVS 374
Query: 1279 GRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKL 1338
GRG+LHLTIL+ENMRREGYEL+VSRP+ + ++GE EPYE L +D+EE +QG +M+ L
Sbjct: 375 GRGQLHLTILLENMRREGYELAVSRPKPRLQVVDGERQEPYEALTMDLEEEHQGAVMEAL 434
Query: 1339 NYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKS 1398
R G+L+N+E + K RVRLEYR+P+RGLIGFQNEF+ +TRGTG++SHVFEEY P+
Sbjct: 435 GRRRGELQNMEPDGKGRVRLEYRVPARGLIGFQNEFLNMTRGTGIMSHVFEEYGPWAG-- 492
Query: 1399 KYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVN 1458
++ RR GVLISQ G AVAY+LWKLQDRGR+F+ ND +YEGMIIGIH+RDNDL+VN
Sbjct: 493 --EIEGRRQGVLISQDDGAAVAYALWKLQDRGRMFVKPNDALYEGMIIGIHTRDNDLVVN 550
Query: 1459 PIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENE 1518
PI+EK+LTN+R+SG DEAI L PI++TLE A+EFI +DELVEITPK+IRLRKR LKE+E
Sbjct: 551 PIREKKLTNVRASGKDEAINLTPPIELTLEKAVEFIAEDELVEITPKSIRLRKRHLKEHE 610
Query: 1519 RKK 1521
R++
Sbjct: 611 RRR 613
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 15 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVNERVMDSNDLERERGITILAKNCAVEYKG 74
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV +
Sbjct: 75 TRINIVDTPGHADFGGEVERALSMVDGVLLLVDAMDGPMPQTRFVTRKALALGLRPIVVV 134
Query: 176 NKIDK 180
NKID+
Sbjct: 135 NKIDR 139
>gi|30250473|ref|NP_842543.1| GTP-binding elongation factor [Nitrosomonas europaea ATCC 19718]
gi|30139314|emb|CAD86466.1| GTP-binding elongation factor:Elongation factor Tu domain 2
[Nitrosomonas europaea ATCC 19718]
Length = 604
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/596 (63%), Positives = 485/596 (81%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL Q+GTF +Q + R+MDS++IE+ERGITIFSKNC+I+Y G
Sbjct: 9 AIIAHVDHGKTTMVDKLLHQAGTFAAHQTVAERVMDSDDIERERGITIFSKNCAIDYAGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL G +PIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALASGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ TFDLFDKL ATEEQLDFPV+Y SAL+GYA ++ +M PLF+
Sbjct: 129 KIDRPGARPDWVVNQTFDLFDKLNATEEQLDFPVVYASALNGYATLDANQPGSDMRPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+VP + + PLQLQI +L+YSS++G++GIGRI GR+K Q+V+++ G + P
Sbjct: 189 MILKHVPAPVGDPDQPLQLQISALDYSSFVGRLGIGRINRGRLKPGQEVMVLTG-ERAPK 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA++NQ+ F+GLDR+ ++EA +GDIVLI+GIEE+ IG+T+ D P LPM +DEPTL
Sbjct: 248 KARVNQVSGFRGLDRIQLSEAAAGDIVLISGIEELGIGTTLADIDHPEALPMPVVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++NF VN SP AG+EGKF+T+RQ++ RL+ E+ N+ LR+ + DS + VSGRGELHL
Sbjct: 308 SMNFQVNTSPFAGKEGKFVTSRQLRERLEKELLTNVALRLEETGETDS-FLVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRP+V+ + ++GE EP+E L VDI+E NQG +M+ L R GDL
Sbjct: 367 TILLENMRREGYELAVSRPKVVIREIDGEKCEPFEVLTVDIDEANQGAVMEALGTRRGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + RVRL+YRIP+RGLIGFQ+EF+TLTRGTG++SHVF+EYAP + D+ R
Sbjct: 427 LDMVTDGRGRVRLDYRIPARGLIGFQSEFMTLTRGTGIMSHVFDEYAPM----RPDMASR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS G+AVAY+LWKLQ+RGR+F++ + +YEGM+IGIHSR+NDL+VNPIK KQL
Sbjct: 483 KNGVLISAEMGEAVAYALWKLQERGRMFVSPGEPLYEGMVIGIHSRENDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DEA+ L PI++TLE AIEFI DDELVEITPK+IR+RKRFL E+ERK+
Sbjct: 543 TNIRASGHDEAVVLTPPIQLTLESAIEFIADDELVEITPKSIRIRKRFLLEHERKR 598
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF----------- 120
+ I+ HVDHGKT+++D + F+ + + + + + IT
Sbjct: 8 IAIIAHVDHGKTTMVDKLLHQAGTFAAHQTVAERVMDSDDIERERGITIFSKNCAIDYAG 67
Query: 121 -----LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+DTPGH F R + D V+L+V A +G MPQTR A SG+ IV +
Sbjct: 68 VHINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALASGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|134095610|ref|YP_001100685.1| translation initiation factor IF-2 [Herminiimonas arsenicoxydans]
gi|166232551|sp|A4G7S7.1|IF2_HERAR RecName: Full=Translation initiation factor IF-2
gi|133739513|emb|CAL62564.1| Translation initiation factor IF-2 [Herminiimonas arsenicoxydans]
Length = 941
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/539 (69%), Positives = 463/539 (85%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK LMKLGQM TINQVLDQETAMILVEEMGHVAHA+KL+DPE+ LL +
Sbjct: 376 MSVKASEVIKQLMKLGQMCTINQVLDQETAMILVEEMGHVAHAAKLDDPEA-LLEIGAEQ 434
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 435 ADVEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVATGEAGGITQHIGAYHVETPRGMITF 494
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVPL+VAINKIDK
Sbjct: 495 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINKIDK 554
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
NLDR+KQ+LI+EQV+PEEYGG SPF+ +SAKTG GI+ LLE + LQAE+LELKAPV
Sbjct: 555 PSANLDRVKQELIAEQVVPEEYGGDSPFVPVSAKTGEGIDALLEQVLLQAEVLELKAPVV 614
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PA+G+++E++LDKG+GPVAT+L+QSGTLR D+V+AG++YGR+R+ML+ENGK+I EAGP
Sbjct: 615 SPARGLVVEAKLDKGRGPVATILVQSGTLRRGDVVLAGSAYGRVRAMLDENGKSISEAGP 674
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +GEE+ V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF ++
Sbjct: 675 SIPVEIQGLTEVPNAGEEVMVMADERKAREIGLFRQGKFRDVKLAKQQAAKLENMFENMG 734
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +IIKTDV GS+E L SL+ LST +V++QV+H AVG I+ESD+NLA+ASKA+
Sbjct: 735 EGEVKNLPMIIKTDVQGSQEALVGSLQKLSTGEVRVQVVHAAVGGISESDVNLAVASKAV 794
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADAS RKLA+ N ++IRY+NIIY+ + EIK+ ++ ++ EK+E LGL EIRQ
Sbjct: 795 IIGFNTRADASARKLAEANGVDIRYYNIIYDAVDEIKAAMSGMLSPEKREQALGLVEIRQ 854
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VILV+KV IAGCY+LEG+++R + +R+LR+ +IWTGELDSLKRFKD+ KEVK GFEC
Sbjct: 855 VILVSKVGAIAGCYVLEGVVKRGASVRLLRDNVVIWTGELDSLKRFKDDAKEVKFGFEC 913
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 448 VMGHVDHGKTSLLDYIRRAKVATGEAGGITQHI-GAYHVETPRGMITF------------ 494
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 495 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINK 551
Query: 1047 IDRSNA 1052
ID+ +A
Sbjct: 552 IDKPSA 557
>gi|257093569|ref|YP_003167210.1| GTP-binding protein TypA [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257046093|gb|ACV35281.1| GTP-binding protein TypA [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 613
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/605 (64%), Positives = 476/605 (78%), Gaps = 14/605 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL Q+GTF +Q+I R+MDSN++EKERGITI +KN +++Y G
Sbjct: 9 AIIAHVDHGKTTLVDKLLVQAGTFSAHQHITERMMDSNDLEKERGITILAKNLAVDYLGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD TFDLFDKL A +EQLDFPVIY SA++GYA + +M P+F+
Sbjct: 129 KIDRDGARPDWVVDHTFDLFDKLGANDEQLDFPVIYASAINGYATLDLAKPSPDMRPMFD 188
Query: 1106 AILKYV-PVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD-- 1162
ILK V P H D + PLQLQI +L+YSSY+G+IGIGRI GR+K Q V++M G D
Sbjct: 189 TILKQVSPPHADGIDGPLQLQISALDYSSYVGRIGIGRIQRGRLKPAQQVIVMYGQADAE 248
Query: 1163 ------KPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLP 1216
P AK+ Q+ F+GL+RV ++EAL+GDIVL+TGI+++ IG TI D KP LP
Sbjct: 249 GRFEHGSPKTAKLGQVFGFQGLERVPMDEALAGDIVLVTGIDDLSIGCTITDTEKPEALP 308
Query: 1217 MLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYE 1276
ML IDEPTL + FMVNNSP AG EGKF+T+RQI RL E+ N+ LRV + DS +
Sbjct: 309 MLKIDEPTLNMTFMVNNSPYAGTEGKFVTSRQIGERLRKELLTNMALRVEETADTDS-FL 367
Query: 1277 VSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQ 1336
VSGRGELHLTIL+E MRREGYEL+V RPRVI K ++GE EPYE L +D+EE +QG +M+
Sbjct: 368 VSGRGELHLTILLETMRREGYELAVGRPRVIIKEIDGEQCEPYEMLTLDVEEAHQGAVME 427
Query: 1337 KLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYN 1396
L YR GDL+++ + + RVRLEYRIP+RGLIGFQ E + LTRGTGL+SHVF+EY P
Sbjct: 428 ALGYRRGDLQDMSSDGRGRVRLEYRIPARGLIGFQGEVMNLTRGTGLVSHVFDEYGPL-- 485
Query: 1397 KSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLL 1456
K D+G RRNGVLIS G+AVAYSLWKLQDRGR+F D +YEGM+IGIHSR+NDL+
Sbjct: 486 --KGDIGGRRNGVLISGEKGEAVAYSLWKLQDRGRMFSVPGDRLYEGMVIGIHSRENDLV 543
Query: 1457 VNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKE 1516
VNPIK KQLTN+R+SG+DEA++L+ P+ +TLE A+EFINDDELVEITPK+IR+RKR L +
Sbjct: 544 VNPIKGKQLTNVRASGTDEAVRLVPPVALTLESAVEFINDDELVEITPKSIRIRKRLLTD 603
Query: 1517 NERKK 1521
NER++
Sbjct: 604 NERRR 608
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + FS IT+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLVQAGTFSAHQHITERMMDSNDLEKERGITILAKNLAVDYLG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 VHINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|409407358|ref|ZP_11255809.1| translation initiation factor IF-2 [Herbaspirillum sp. GW103]
gi|386433109|gb|EIJ45935.1| translation initiation factor IF-2 [Herbaspirillum sp. GW103]
Length = 944
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/539 (69%), Positives = 470/539 (87%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK+LMKLGQMVTINQVLDQETAMI+VEEMGH AHA+KL+DPE+ L+ E ++
Sbjct: 379 MAVKASEVIKHLMKLGQMVTINQVLDQETAMIVVEEMGHRAHAAKLDDPEALLV-EGEEH 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G ITF
Sbjct: 438 GDAEALPRAPVVTVMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVETPRGMITF 497
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 498 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 557
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N DR+KQ+LI+E+V+PEEYGG +PFI++SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 558 PGANPDRVKQELIAEEVVPEEYGGDAPFIAVSAKTGEGIDSLLENVLLQAEVLELKAPVD 617
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G++IE++LDKG+GPVAT+L+QSGTL+ D+V+AG++YGR+R+ML+ENGKNI EAGP
Sbjct: 618 VPARGLVIEAKLDKGRGPVATILVQSGTLKRGDVVLAGSAYGRVRAMLDENGKNIAEAGP 677
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
S+PVEIQGLT+VP +GEE+ V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF+ +
Sbjct: 678 SLPVEIQGLTEVPSAGEEVVVMTDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMT 737
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +IIKTDV GS+E L +SL+ LST +V++QV+H AVG I+E+D+NLA+ASKA+
Sbjct: 738 EGEVKNLPMIIKTDVQGSQEALVQSLQKLSTAEVRVQVVHAAVGGISENDVNLAVASKAV 797
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADAS RKLA+ + ++IRY+NIIY+ + E+K+ ++ ++ EK+E LGL EIRQ
Sbjct: 798 IIGFNTRADASARKLAEASGVDIRYYNIIYDAVDEVKAAMSGMLSPEKREQALGLVEIRQ 857
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V +V+KV IAGCY+LEGL++R S++R+LRN ++WTGELDSLKRFKD+VKEVK+GFEC
Sbjct: 858 VFVVSKVGSIAGCYVLEGLVKRGSQVRLLRNNVVVWTGELDSLKRFKDDVKEVKSGFEC 916
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 451 VMGHVDHGKTSLLDYIRRTKVASGEAGGITQHI-GAYHVETPRGMITF------------ 497
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 498 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 554
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A P+ V + +++ E D P I SA G
Sbjct: 555 IDKPGANPDRVKQEL--IAEEVVPEEYGGDAPFIAVSAKTG 593
>gi|82702893|ref|YP_412459.1| GTP-binding protein TypA [Nitrosospira multiformis ATCC 25196]
gi|82410958|gb|ABB75067.1| GTP-binding protein TypA [Nitrosospira multiformis ATCC 25196]
Length = 603
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/596 (62%), Positives = 485/596 (81%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL Q+G+F +Q+I R+MDSN+IE+ERGITI +KNC+ +Y G
Sbjct: 9 AIIAHVDHGKTTLVDKLLHQAGSFAAHQHIAERVMDSNDIERERGITILAKNCAADYEGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL LG +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALSLGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVV+ TFDLFDKL A EEQLDFPV+Y SAL+GYA + K NM PLF+
Sbjct: 129 KVDRPGARPDWVVNQTFDLFDKLGANEEQLDFPVVYASALNGYATLDLKQPGINMRPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL +V +++ + PLQLQI +L+YSS++G+IGIGRI GR+K QD+ ++ G + P
Sbjct: 189 TILSHVRAPEEDVDGPLQLQISALDYSSFVGRIGIGRINRGRLKPGQDITVLAG-SNPPR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA++NQ+ F+G++RV + EAL+GDIVLI G+EE+ IG+T+ D +P LPML +DEPTL
Sbjct: 248 KARVNQVLGFRGIERVQLAEALAGDIVLINGVEELSIGATLADIDEPEALPMLAVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NF VN SP AG+EGKF+T+RQ++ RL+ E+ N+ +++ + K DS + VSGRGELHL
Sbjct: 308 TMNFQVNTSPFAGKEGKFVTSRQLRERLEKELLTNVAMKLEETKDTDS-FLVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRP V+ + ++G EP+E L VD+EE +QG +M+ L R GDL
Sbjct: 367 TILLENMRREGYELAVSRPHVVIREIDGVKCEPFEMLTVDVEEAHQGAVMEALGARRGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ +E+ RVRL+YRIP+RGLIGFQ+EF+T+TRGTGL+SHVF+EYAP + ++ R
Sbjct: 427 QDMVSDERGRVRLDYRIPARGLIGFQSEFLTMTRGTGLMSHVFDEYAPM----RPEITAR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLIS G+AVAY+LWKLQ+RGR+F++ + +YEGM+IGIHSRDNDL+VNPIK KQL
Sbjct: 483 RNGVLISAEQGEAVAYALWKLQERGRMFVSPGERLYEGMVIGIHSRDNDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SGSDEA+ L PI++TLE AIEFI DDELVEITPK IR+RKR L+E+ER+K
Sbjct: 543 TNIRASGSDEAVVLTPPIQLTLESAIEFIADDELVEITPKTIRIRKRLLQEHERRK 598
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + F+ I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLHQAGSFAAHQHIAERVMDSNDIERERGITILAKNCAADYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 VHINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALSLGLRPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|225025040|ref|ZP_03714232.1| hypothetical protein EIKCOROL_01929 [Eikenella corrodens ATCC 23834]
gi|224942188|gb|EEG23397.1| hypothetical protein EIKCOROL_01929 [Eikenella corrodens ATCC 23834]
Length = 603
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/601 (62%), Positives = 482/601 (80%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ+++ R+MDSN+IEKERGITI +KN +IEY G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQHVDERVMDSNDIEKERGITILAKNTAIEYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD VLLL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVLLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ AR WV+D TFDLFD L A+EEQLDFP++Y S L G+A N + +M PLF+
Sbjct: 128 KIDKPTARASWVIDQTFDLFDNLGASEEQLDFPIVYASGLSGFAKLNEEDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ PLQLQI L+Y +Y G++GIGRIL+G+I+ Q V +MN D +
Sbjct: 188 TILKYTPAPSGSADAPLQLQISQLDYDNYTGRLGIGRILNGKIRPGQTVAVMNH-DKQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F GL+RV + EA +GDIVLI+GI+EI IG TICD P G+PML++DEPTL
Sbjct: 247 QGRINQLLGFSGLERVPLQEAEAGDIVLISGIDEIGIGVTICDKDNPIGVPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D I+ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQRELLTNVALRV-EDTADADIFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDENQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ G+AVAY+LW L++RGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 RNGVLISQEQGEAVAYALWNLEERGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQHVDERVMDSNDIEKERGITILAKNTAIEYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVLLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|300312898|ref|YP_003776990.1| translation initiation factor IF-2 [Herbaspirillum seropedicae
SmR1]
gi|300075683|gb|ADJ65082.1| translation initiation factor 2 (IF-2; GTPase) protein
[Herbaspirillum seropedicae SmR1]
Length = 954
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/539 (69%), Positives = 470/539 (87%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK+LMKLGQMVTINQVLDQETAMI+VEEMGH AHA+KL+DPE+ L+ E ++
Sbjct: 389 MAVKASEVIKHLMKLGQMVTINQVLDQETAMIVVEEMGHRAHAAKLDDPEALLV-EGEEH 447
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G ITF
Sbjct: 448 GDAEALPRAPVVTVMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVETPRGMITF 507
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 508 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 567
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N DR+KQ+LI+E+V+PEEYGG +PFI +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 568 PGANPDRVKQELIAEEVVPEEYGGDAPFIPVSAKTGEGIDSLLENVLLQAEVLELKAPVE 627
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G++IE++LDKG+GPVAT+L+QSGTL+ D+V+AG++YGR+R+ML+ENGKNI EAGP
Sbjct: 628 VPARGLVIEAKLDKGRGPVATILVQSGTLKRGDVVLAGSAYGRVRAMLDENGKNIAEAGP 687
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
S+PVEIQGLT+VP +GEE+ V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF+ +
Sbjct: 688 SLPVEIQGLTEVPSAGEEVVVMTDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMT 747
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +IIKTDV GS+E L +SL+ LST++V++QV+H AVG I+E+D+NLA+ASKA+
Sbjct: 748 EGEVKNLPMIIKTDVQGSQEALVQSLQKLSTNEVRVQVVHAAVGGISENDVNLAVASKAV 807
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADAS RKLA+ + ++IRY+NIIY+ + E+K+ ++ ++ EK+E LGL EIRQ
Sbjct: 808 IIGFNTRADASARKLAEASGVDIRYYNIIYDAVDEVKAAMSGMLSPEKREQALGLVEIRQ 867
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V +V+KV IAGCY+LEGL++R S++R+LRN ++WTGELDSLKRFKD+VKEVK+GFEC
Sbjct: 868 VFVVSKVGSIAGCYVLEGLVKRGSQVRLLRNNVVVWTGELDSLKRFKDDVKEVKSGFEC 926
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 461 VMGHVDHGKTSLLDYIRRTKVASGEAGGITQHI-GAYHVETPRGMITF------------ 507
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 508 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 564
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A P+ V + +++ E D P I SA G
Sbjct: 565 IDKPGANPDRVKQEL--IAEEVVPEEYGGDAPFIPVSAKTG 603
>gi|451823118|ref|YP_007459392.1| GTP-binding protein [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451775918|gb|AGF46959.1| GTP-binding protein [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 604
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/596 (65%), Positives = 485/596 (81%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSG FR NQ++ R+MDSN +EKERGITI SKNC++EYN
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGVFRNNQSVTKRVMDSNILEKERGITILSKNCAVEYNDV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMV+ VLLL+D+VEGPMPQT FVTRKAL LG KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVEGVLLLVDSVEGPMPQTVFVTRKALSLGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARPE+VV+ F+LFD+L ATEEQLDFPVIY S L GY+ + R GNM LF+
Sbjct: 129 KIDKPAARPEFVVNEVFELFDRLGATEEQLDFPVIYASGLSGYSGNDPTVRSGNMDSLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AIL+YVP H + Q+QI SL+Y+SY+GKIGIG+I G + DV + G DK
Sbjct: 189 AILEYVPNHNKDHEGSFQMQIASLDYNSYVGKIGIGKIHRGVVYPSMDVALKMGDSDKVI 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +INQ+ F GLDR+ V++A +GDIVLI GIE++ IG T+ D LP+L+IDEPTL
Sbjct: 249 KTRINQLLKFSGLDRIPVDKAEAGDIVLINGIEDLEIGITVTDQLNIQSLPVLHIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAG+EGKF+T+RQI++RL+ E+K+N+ LRV + DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGKEGKFVTSRQIRDRLNLELKSNVALRVKETD-DDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYELSVSRPRV++K ++G +EPYE+L + +E+ QG IM+++ R GDL
Sbjct: 368 TILLETMRREGYELSVSRPRVVYKDIDGVKHEPYEDLTLYVEDNYQGPIMEEVGRRKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + + R+RLEY IP+R LIGFQN+F+TLTRGTGL+SHVF +Y PFY S L R
Sbjct: 428 QNMIPDGQGRIRLEYIIPARSLIGFQNDFMTLTRGTGLMSHVFRDYYPFYEGS---LHNR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQ SG+AVAY+LWKLQ+RGR+FI + +YEGMIIGIHSRDNDL++NP++EKQL
Sbjct: 485 RNGVLISQCSGEAVAYALWKLQERGRMFIKPGESLYEGMIIGIHSRDNDLVINPVREKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEAI+L+ PI++TLEYAIEFI DDELVEITPK IRLRKR+L+E+ER++
Sbjct: 545 TNIRASGTDEAIRLVPPIQLTLEYAIEFIEDDELVEITPKAIRLRKRYLQEHERRR 600
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + VF +T+ + N++ IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGVFRNNQSVTKRVMDSNILEKERGITILSKNCAVEYND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + + V+L+V + +G MPQT A G+ IV +
Sbjct: 68 VHINIIDTPGHADFGGEVERVLSMVEGVLLLVDSVEGPMPQTVFVTRKALSLGLKPIVVV 127
Query: 176 NKIDK 180
NKIDK
Sbjct: 128 NKIDK 132
>gi|451812260|ref|YP_007448714.1| GTP-binding protein [Candidatus Kinetoplastibacterium galatii TCC219]
gi|451778162|gb|AGF49110.1| GTP-binding protein [Candidatus Kinetoplastibacterium galatii TCC219]
Length = 607
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/596 (64%), Positives = 483/596 (81%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSG FRKNQNI R+MDSN +EKERGITI SKNC++EY G
Sbjct: 9 AIIAHVDHGKTTLVDQLLKQSGIFRKNQNIVKRVMDSNALEKERGITILSKNCAVEYQGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL L KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTVFVTRKALALNLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR ++V++ FDLFD+L ATEEQLDFP++Y S L GY+ + R G+M LF
Sbjct: 129 KIDRPGARQDFVINEVFDLFDRLGATEEQLDFPIVYASGLSGYSGDTPDVRSGDMSALFN 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILKYVP H ++S+ P Q+QI S++YSSY+GKIGIG+I G + DVV+ G D P
Sbjct: 189 AILKYVPEHNNSSDGPFQMQIASIDYSSYVGKIGIGKINRGILYPGMDVVMKLGHDGIPE 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+++NQI F GL+R+ V++A +GDIVLI GIE I IG+T+ D + LP+L+IDEPTL
Sbjct: 249 KSRVNQILKFSGLERISVDKAEAGDIVLINGIENIAIGTTLTDINHVEALPVLHIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAG+EGKF+T+RQI +RL E+K+N+ LRV+ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGKEGKFVTSRQIFDRLSLELKSNVALRVSTTD-DDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRP V++K ++G EPYE+L + +++I QG +M++L R G+L
Sbjct: 368 TILLETMRREGYELAVSRPNVVYKDIDGVKNEPYEDLTIYVDDIYQGSVMEELGRRKGNL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + + RLEY I +R LIGFQN+F+TLTRG G++SHVF EYAP + S R
Sbjct: 428 QNMLPDGLGKTRLEYIISARSLIGFQNDFMTLTRGNGIMSHVFREYAPVNDVSNC---GR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQY G AVAY+LWKLQDRGR+F+N D++YEGMI+GIHSRDNDL+VNP KEKQL
Sbjct: 485 RNGVLISQYPGTAVAYALWKLQDRGRMFVNPGDVLYEGMIVGIHSRDNDLVVNPTKEKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEAI+LI P++++LEYAIEFI DDELVEITPK+IRLRKR+L+E+ER+K
Sbjct: 545 TNIRASGTDEAIRLIPPVQLSLEYAIEFIEDDELVEITPKSIRLRKRYLQEHERRK 600
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + K + +F + I + + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLKQSGIFRKNQNIVKRVMDSNALEKERGITILSKNCAVEYQG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A + IV +
Sbjct: 68 VHINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTVFVTRKALALNLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|114332461|ref|YP_748683.1| GTP-binding protein TypA [Nitrosomonas eutropha C91]
gi|114309475|gb|ABI60718.1| GTP-binding protein TypA [Nitrosomonas eutropha C91]
Length = 604
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/596 (62%), Positives = 481/596 (80%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL Q+GTF +Q I R+MDS++IE+ERGITIFSKNC+I+Y G
Sbjct: 9 AIIAHVDHGKTTMVDKLLHQAGTFAAHQTIAERVMDSDDIERERGITIFSKNCAIDYAGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVTRKAL G PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALAAGLCPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ TFDLFDKL ATEEQLDFPVIY S L+GYA + K +M PLF+
Sbjct: 129 KIDRPGARPDWVVNQTFDLFDKLNATEEQLDFPVIYASGLNGYATSDPKQPGSDMRPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+VP + + PLQLQI +L+YSS++G++GIGRI GR+KS Q+V++M G P
Sbjct: 189 LILKHVPAPTGDPDQPLQLQISALDYSSFVGRLGIGRISRGRLKSGQEVMVMTG-GQTPK 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA++NQI F GLDRV ++EA +G+IVLI+GI+E+ IG+T+ D +P LPM +DEPTL
Sbjct: 248 KARVNQISAFSGLDRVQLSEAAAGEIVLISGIDELSIGTTLADTDRPEALPMPKVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++NF VN SP AG+EGKFIT+RQ++ RL+ E+ N+ L++ + DS + VSGRGELHL
Sbjct: 308 SMNFQVNTSPFAGKEGKFITSRQLRERLEKELLTNVALKLEETGETDS-FLVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRP+V+ + ++G EP+E L +DI+E +QG +M+ L R GDL
Sbjct: 367 TILLENMRREGYELAVSRPKVVIREIDGVKCEPFEILTIDIDETHQGAVMETLGTRRGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + RVRL+YRIP+RGLIGFQ+EF+TLTRGTG+ISH+F+EYAP + D+ R
Sbjct: 427 LDMISDGRGRVRLDYRIPARGLIGFQSEFMTLTRGTGIISHIFDEYAPM----RPDIASR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS G+ VAY+LWKLQ+RGR+F++ + VYEGM+IGIH+R+NDL+VNPIK KQL
Sbjct: 483 KNGVLISAEYGEVVAYALWKLQERGRMFVSPGEPVYEGMVIGIHTRENDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DEA+ L PI++TLE A+EFI DDELVEITPK+IR+RKRFL E+ERK+
Sbjct: 543 TNIRASGHDEAVVLTPPIQLTLESAVEFITDDELVEITPKSIRIRKRFLLEHERKR 598
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF----------- 120
+ I+ HVDHGKT+++D + F+ I + + + + IT
Sbjct: 8 IAIIAHVDHGKTTMVDKLLHQAGTFAAHQTIAERVMDSDDIERERGITIFSKNCAIDYAG 67
Query: 121 -----LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+DTPGH F R + D V+L+V A +G MPQTR A +G+ IV I
Sbjct: 68 VHINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTRKALAAGLCPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|438000057|ref|YP_007183790.1| GTP-binding protein [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451812986|ref|YP_007449439.1| GTP-binding protein [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429339291|gb|AFZ83713.1| GTP-binding protein [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451778955|gb|AGF49835.1| GTP-binding protein [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 607
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/596 (64%), Positives = 487/596 (81%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSG FRKNQNI R+MDSN +EKERGITI SKNC++EY G
Sbjct: 9 AIIAHVDHGKTTLVDQLLKQSGIFRKNQNIVKRVMDSNALEKERGITILSKNCAVEYKGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVT+KAL L KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTVFVTKKALALKLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR ++V++ FDLFD+L ATEEQLDFP++Y S L GY+++ + R G+M LF+
Sbjct: 129 KIDRPGARQDFVINEVFDLFDRLGATEEQLDFPIVYASGLSGYSSDRADVRSGDMSALFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILKYVP H ++S+ P Q+QI S++YSSY+GKIGIG+I G + DVV+ G +P
Sbjct: 189 AILKYVPEHNNSSDGPFQMQIASIDYSSYVGKIGIGKINRGILYPGMDVVMKLGHAGEPE 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+++NQI F GLDR+ V++A +GDIVLI GI+ I IG+T+ D + LP+L+IDEPTL
Sbjct: 249 KSRVNQILKFSGLDRISVDKAEAGDIVLINGIDNISIGTTLSDINNIEALPILHIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAG+EGKF+T+RQI +RL E+K+N+ LRV+ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGKEGKFVTSRQIFDRLSLELKSNVALRVSTTD-DDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRP V+++ ++G EPYE+L + +++I+QG +M++L R G+L
Sbjct: 368 TILLETMRREGYELAVSRPNVVYRDIDGIKNEPYEDLTIYVDDIHQGSVMEELGRRKGNL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + + RLEY I +R LIGFQNEF+TLTRG G++SHVF EYAP + S R
Sbjct: 428 QNMLPDGLGKTRLEYVISARSLIGFQNEFMTLTRGNGIMSHVFREYAPVNDISNC---GR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQYSG AVAY+LWKLQDRGR+F+N + +YEGMI+GIHSRDNDL+VNP KEKQL
Sbjct: 485 RNGVLISQYSGIAVAYALWKLQDRGRMFVNPGETLYEGMIVGIHSRDNDLVVNPTKEKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEAI+LI P++++LEYAIEFI DDELVEITPK+IRLRKR+L+E+ER+K
Sbjct: 545 TNIRASGTDEAIRLIPPVQLSLEYAIEFIEDDELVEITPKSIRLRKRYLQEHERRK 600
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + K + +F + I + + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLKQSGIFRKNQNIVKRVMDSNALEKERGITILSKNCAVEYKG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A + IV +
Sbjct: 68 VHINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTVFVTKKALALKLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|261400217|ref|ZP_05986342.1| GTP-binding protein TypA/BipA [Neisseria lactamica ATCC 23970]
gi|269210013|gb|EEZ76468.1| GTP-binding protein TypA/BipA [Neisseria lactamica ATCC 23970]
Length = 603
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN D +
Sbjct: 188 TILKYTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|268686574|ref|ZP_06153436.1| GTP-binding protein TypA [Neisseria gonorrhoeae SK-93-1035]
gi|268626858|gb|EEZ59258.1| GTP-binding protein TypA [Neisseria gonorrhoeae SK-93-1035]
Length = 603
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/601 (62%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGC 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKYTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML +DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLRVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E N R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESNGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 CHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|74316790|ref|YP_314530.1| GTP-binding protein TypA [Thiobacillus denitrificans ATCC 25259]
gi|74056285|gb|AAZ96725.1| GTP-binding protein TypA [Thiobacillus denitrificans ATCC 25259]
Length = 610
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/602 (61%), Positives = 493/602 (81%), Gaps = 12/602 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTFR NQ I+ R+MDSN++EKERGITI +KN +I Y
Sbjct: 9 AIIAHVDHGKTTLVDQLLKQSGTFRDNQAIDERVMDSNDLEKERGITILAKNTAITYGDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DAVEGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSK--ARQG----N 1099
K+DR +RP+WVVD TFDLFDKL AT++QLDFP+IY S L+G+A + K QG +
Sbjct: 129 KVDRPGSRPDWVVDQTFDLFDKLGATDDQLDFPIIYASGLNGWACLDLKDAPSQGGSAAD 188
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLF+ +L +VP +++ PLQLQI +L+YS+Y G++G+GR+L+GRIK VV+MN
Sbjct: 189 MKPLFDTVLAHVPTPPGSADAPLQLQIAALDYSTYTGRLGVGRVLNGRIKPGMSVVVMN- 247
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+++ +INQ+ FKGLDRV V+EA +GDI++I+G+++I IG TICD P GLP+L
Sbjct: 248 HEEQVATGRINQVLGFKGLDRVPVDEAEAGDIIIISGLDDIGIGVTICDKENPVGLPVLG 307
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPTLT++FMVN SPLAG EGKF+T+RQI++RL+ E+ N+ LRV + D ++ VSG
Sbjct: 308 VDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRLNKELLTNVALRV-DDTGDADVFRVSG 366
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RGELHLTIL+ENMRREG+E++V++PRV++K +NGE EPYENL +D+E+ +QG +M+++
Sbjct: 367 RGELHLTILLENMRREGFEMAVAKPRVVYKEINGEKCEPYENLTIDLEDEHQGGVMEEIG 426
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
R G+L N+E + + R RLEY IP+RGLIGFQ++F+T+TRGTGL+SHVF++Y P K
Sbjct: 427 RRRGELTNMESDGRGRTRLEYHIPARGLIGFQSDFMTMTRGTGLMSHVFDDYGPV----K 482
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
DL R NGVL+SQ +G+AVAY+LWKL+DRGR+F++ D +YEGMIIGIHSRDNDL+VNP
Sbjct: 483 ADLPGRHNGVLVSQDNGEAVAYALWKLEDRGRMFVSPGDKLYEGMIIGIHSRDNDLVVNP 542
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
IK KQLTN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITPK+IR+RKR L+E+ER
Sbjct: 543 IKGKQLTNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPKSIRIRKRHLQEHER 602
Query: 1520 KK 1521
K+
Sbjct: 603 KR 604
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + F + I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLKQSGTFRDNQAIDERVMDSNDLEKERGITILAKNTAITYGD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 68 YHINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLRPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|415903253|ref|ZP_11552199.1| translation initiation factor IF-2, partial [Herbaspirillum
frisingense GSF30]
gi|407763736|gb|EKF72351.1| translation initiation factor IF-2, partial [Herbaspirillum
frisingense GSF30]
Length = 736
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/539 (68%), Positives = 467/539 (86%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK+LMKLGQMVTINQVLDQETAMI+VEEMGH AHA+K DPE+ L+ E ++
Sbjct: 171 MAVKASEVIKHLMKLGQMVTINQVLDQETAMIVVEEMGHRAHAAKAEDPEALLV-EGEEH 229
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G ITF
Sbjct: 230 ADAEALPRAPVVTVMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVETPRGMITF 289
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 290 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 349
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N DR+KQ+LI+E+V+PEEYGG +PFI++SAKTG GI+ LLEN+ LQAE+LEL APV
Sbjct: 350 PGANPDRVKQELIAEEVVPEEYGGDAPFIAVSAKTGEGIDSLLENVLLQAEVLELTAPVD 409
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G++IE++LDKG+GPVAT+L+QSGTL+ D+V+AG++YGR+R+ML+ENGKNI EAGP
Sbjct: 410 VPARGLVIEAKLDKGRGPVATILVQSGTLKRGDVVLAGSAYGRVRAMLDENGKNIAEAGP 469
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
S+PVEIQGLT+VP +GEE+ V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF+ +
Sbjct: 470 SLPVEIQGLTEVPSAGEEVVVMTDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMT 529
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +IIKTDV GS+E L +SL+ LST +V++QV+H AVG I+E+D+NLA+ASKA+
Sbjct: 530 EGEVKNLPMIIKTDVQGSQEALVQSLQKLSTSEVRVQVVHAAVGGISENDVNLAVASKAV 589
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADAS RKLA+ + ++IRY+NIIY+ + E+K+ ++ ++ EK+E LGL EIRQ
Sbjct: 590 IIGFNTRADASARKLAEASGVDIRYYNIIYDAVDEVKAAMSGMLSPEKREQALGLVEIRQ 649
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V +V+KV IAGCY+LEGL++R S++R+LRN ++WTGELDSLKRFKD+VKEVK+GFEC
Sbjct: 650 VFVVSKVGSIAGCYVLEGLVKRGSQVRLLRNNVVVWTGELDSLKRFKDDVKEVKSGFEC 708
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 243 VMGHVDHGKTSLLDYIRRTKVASGEAGGITQHI-GAYHVETPRGMITF------------ 289
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 290 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 346
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A P+ V + +++ E D P I SA G
Sbjct: 347 IDKPGANPDRVKQEL--IAEEVVPEEYGGDAPFIAVSAKTG 385
>gi|59801217|ref|YP_207929.1| GTP-binding protein [Neisseria gonorrhoeae FA 1090]
gi|194098571|ref|YP_002001633.1| putative GTP-binding protein [Neisseria gonorrhoeae NCCP11945]
gi|240014137|ref|ZP_04721050.1| putative GTP-binding protein [Neisseria gonorrhoeae DGI18]
gi|240016572|ref|ZP_04723112.1| putative GTP-binding protein [Neisseria gonorrhoeae FA6140]
gi|240121699|ref|ZP_04734661.1| putative GTP-binding protein [Neisseria gonorrhoeae PID24-1]
gi|254493739|ref|ZP_05106910.1| GTP-binding protein TypA [Neisseria gonorrhoeae 1291]
gi|268596881|ref|ZP_06131048.1| GTP-binding protein TypA [Neisseria gonorrhoeae FA19]
gi|268598952|ref|ZP_06133119.1| GTP-binding protein TypA [Neisseria gonorrhoeae MS11]
gi|268682106|ref|ZP_06148968.1| GTP-binding protein TypA [Neisseria gonorrhoeae PID332]
gi|268684316|ref|ZP_06151178.1| GTP-binding protein TypA [Neisseria gonorrhoeae SK-92-679]
gi|293399079|ref|ZP_06643244.1| GTP-binding protein TypA/BipA [Neisseria gonorrhoeae F62]
gi|59718112|gb|AAW89517.1| putative GTP-binding protein [Neisseria gonorrhoeae FA 1090]
gi|193933861|gb|ACF29685.1| putative GTP-binding protein [Neisseria gonorrhoeae NCCP11945]
gi|226512779|gb|EEH62124.1| GTP-binding protein TypA [Neisseria gonorrhoeae 1291]
gi|268550669|gb|EEZ45688.1| GTP-binding protein TypA [Neisseria gonorrhoeae FA19]
gi|268583083|gb|EEZ47759.1| GTP-binding protein TypA [Neisseria gonorrhoeae MS11]
gi|268622390|gb|EEZ54790.1| GTP-binding protein TypA [Neisseria gonorrhoeae PID332]
gi|268624600|gb|EEZ57000.1| GTP-binding protein TypA [Neisseria gonorrhoeae SK-92-679]
gi|291610493|gb|EFF39603.1| GTP-binding protein TypA/BipA [Neisseria gonorrhoeae F62]
Length = 603
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGC 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKYTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 CHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|313668306|ref|YP_004048590.1| GTP-binding protein [Neisseria lactamica 020-06]
gi|313005768|emb|CBN87222.1| putative GTP-binding protein [Neisseria lactamica 020-06]
Length = 603
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYAGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN D +
Sbjct: 188 TILKYTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYAG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|451936500|ref|YP_007460354.1| GTP-binding protein [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777423|gb|AGF48398.1| GTP-binding protein [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 607
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/596 (64%), Positives = 481/596 (80%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSG FRKNQNI R+MDSN +EKERGITI SKNC++EY G
Sbjct: 9 AIIAHVDHGKTTLVDQLLKQSGIFRKNQNIVKRVMDSNALEKERGITILSKNCAVEYQGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQT FVTRKAL L KPIVVVN
Sbjct: 69 HINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTVFVTRKALALNLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V++ FDLFD+L ATEEQLDFP++Y S L GY+ + + R G+M LF
Sbjct: 129 KVDRPGARQDFVINEVFDLFDRLGATEEQLDFPIVYASGLSGYSGDTADVRSGDMSALFN 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AILKYVP H ++SN P Q+QI S++YSSY+GKIGIG+I G + DV + G D
Sbjct: 189 AILKYVPEHNNSSNGPFQMQIASIDYSSYVGKIGIGKINRGILYPGMDVAMKLGHDGVLE 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+++NQI F GL+R+ V++A +GDIVLI GIE I IG+T+ D + LP+L+IDEPTL
Sbjct: 249 KSRVNQILKFSGLERISVDKAEAGDIVLINGIENIAIGTTLTDINCVEALPVLHIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+NFMVN SPLAG+EGKF+T+RQI +RL E+K+N+ LRV+ DD+++EVSGRGELHL
Sbjct: 309 TMNFMVNTSPLAGKEGKFVTSRQIFDRLSLELKSNVALRVSTTD-DDTVFEVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+E MRREGYEL+VSRP V++K ++G EPYE+L + +++I QG +M++L R G+L
Sbjct: 368 TILLETMRREGYELAVSRPNVVYKDIDGVKNEPYEDLTIYVDDIYQGGVMEELGRRKGNL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + + RLEY I +R LIGFQN+F+TLTRG G++SHVF EYAP + S R
Sbjct: 428 QNMLPDGLGKTRLEYIISARSLIGFQNDFMTLTRGNGIMSHVFREYAPVNDVSNC---GR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLISQYSG AVAY+LWKLQDRGR+F+N D++YEGMI+GIHSRDNDL+VNP KEKQL
Sbjct: 485 RNGVLISQYSGAAVAYALWKLQDRGRMFVNPGDVLYEGMIVGIHSRDNDLVVNPTKEKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEAI+L P++++LEYAIEFI DDELVEITPK IRLRKR+L+E+ER+K
Sbjct: 545 TNIRASGTDEAIRLTPPVQLSLEYAIEFIEDDELVEITPKAIRLRKRYLQEHERRK 600
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + K + +F + I + + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLKQSGIFRKNQNIVKRVMDSNALEKERGITILSKNCAVEYQG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT A + IV +
Sbjct: 68 VHINIIDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTVFVTRKALALNLKPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|241760509|ref|ZP_04758602.1| GTP-binding protein TypA/BipA [Neisseria flavescens SK114]
gi|241319013|gb|EER55515.1| GTP-binding protein TypA/BipA [Neisseria flavescens SK114]
Length = 603
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/601 (62%), Positives = 481/601 (80%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ + R+MDSN++EKERGITI +KN +IEY G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRSNQQVEERVMDSNDLEKERGITILAKNTAIEYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A + +M PLFE
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLDENDESSDMRPLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P N++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN +++
Sbjct: 188 TILKHTPPPSGNADATLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EEQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F+GL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFQGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADLFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+EL+V +PRV+F+ +NG+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGFELAVGKPRVVFREINGQKCEPYENLTVDVPDENQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFLTLTRGTGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+FI+ ND VYEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFISPNDKVYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRSNQQVEERVMDSNDLEKERGITILAKNTAIEYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|261380682|ref|ZP_05985255.1| GTP-binding protein TypA/BipA [Neisseria subflava NJ9703]
gi|284796392|gb|EFC51739.1| GTP-binding protein TypA/BipA [Neisseria subflava NJ9703]
Length = 603
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/601 (62%), Positives = 481/601 (80%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ + R+MDSN++EKERGITI +KN +IEY G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRSNQQVEERVMDSNDLEKERGITILAKNTAIEYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A + +M PLFE
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLDENDESSDMRPLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN +++
Sbjct: 188 TILKHTPAPSGSADKTLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EEQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F+GL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFQGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+EL+V +PRV+F+ +NG+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGFELAVGKPRVVFREINGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGTGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND VYEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKVYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRSNQQVEERVMDSNDLEKERGITILAKNTAIEYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|421862461|ref|ZP_16294167.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379951|emb|CBX21362.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 603
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKYTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|268594796|ref|ZP_06128963.1| GTP-binding protein TypA [Neisseria gonorrhoeae 35/02]
gi|385335700|ref|YP_005889647.1| putative GTP-binding protein [Neisseria gonorrhoeae TCDC-NG08107]
gi|268548185|gb|EEZ43603.1| GTP-binding protein TypA [Neisseria gonorrhoeae 35/02]
gi|317164243|gb|ADV07784.1| putative GTP-binding protein [Neisseria gonorrhoeae TCDC-NG08107]
Length = 603
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/601 (62%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGC 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKYTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML +DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLRVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 CHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|399017454|ref|ZP_10719646.1| translation initiation factor IF-2 [Herbaspirillum sp. CF444]
gi|398103328|gb|EJL93499.1| translation initiation factor IF-2 [Herbaspirillum sp. CF444]
Length = 957
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/539 (69%), Positives = 463/539 (85%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK+LMKLGQMVTINQVLDQETAMI+VEEMGH AH +KL+DPE+ LL E ++
Sbjct: 392 MSVKASEVIKHLMKLGQMVTINQVLDQETAMIVVEEMGHRAHPAKLDDPEA-LLEEGAEH 450
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 451 PDAELLPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETPRGMITF 510
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 511 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 570
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
NLDR+KQ+L++E V+PEEYGG SPFIS+SAKTG GI+ LLEN+ LQAE+LELKA +
Sbjct: 571 QGANLDRVKQELVAEGVVPEEYGGESPFISVSAKTGEGIDSLLENVLLQAEVLELKAAID 630
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKG+GPVAT+L+QSGTL+ D+V+AG++YGR+R+ML+E+GK+I EAGP
Sbjct: 631 VPAKGLVIEAKLDKGRGPVATILVQSGTLKRGDVVLAGSAYGRVRAMLDESGKSITEAGP 690
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +GEE+ V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF +
Sbjct: 691 SIPVEIQGLTEVPSAGEEVLVMTDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFEQMA 750
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +IIKTDV GS+E L +SL+ LS +V++QV+H AVG I+E+D+NLA+ASKA+
Sbjct: 751 EGEVKNLPMIIKTDVQGSQEALVQSLQKLSNAEVRVQVVHAAVGGISENDVNLAVASKAV 810
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADAS RKLA+ N ++IRY+NIIY+ + E+K+ ++ ++ EK+E LGL EIRQ
Sbjct: 811 IIGFNTRADASARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLAPEKREQALGLVEIRQ 870
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V +V+KV IAGCY+LEGL++R S +R+LRN ++WTGELDSLKRFKD+VKEVK+GFEC
Sbjct: 871 VFVVSKVGSIAGCYVLEGLVKRGSSVRLLRNNVVLWTGELDSLKRFKDDVKEVKSGFEC 929
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 464 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETPRGMITF------------ 510
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 511 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 567
Query: 1047 IDRSNA 1052
ID+ A
Sbjct: 568 IDKQGA 573
>gi|421565418|ref|ZP_16011193.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM3081]
gi|402344544|gb|EJU79680.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM3081]
Length = 603
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYAGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN D +
Sbjct: 188 TILKHTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYAG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|254670193|emb|CBA05313.1| GTP-binding elongation factor [Neisseria meningitidis alpha153]
gi|254673019|emb|CBA07572.1| GTP-binding elongation factor [Neisseria meningitidis alpha275]
Length = 603
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ LQLQI L+Y +Y G++GIGRIL+GRIKS Q V +MN D +
Sbjct: 188 TILKYTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKSGQTVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|291614120|ref|YP_003524277.1| GTP-binding protein TypA [Sideroxydans lithotrophicus ES-1]
gi|291584232|gb|ADE11890.1| GTP-binding protein TypA [Sideroxydans lithotrophicus ES-1]
Length = 610
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/604 (61%), Positives = 488/604 (80%), Gaps = 12/604 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +Q ++ R+MDSN++EKERGITI +KN +IEYNGT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFAAHQKVDVRVMDSNDLEKERGITILAKNTAIEYNGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MV+ VLLL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVNGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN------ 1099
K+DR +RP+WV++ TFDLFDKL AT+EQLDFPVIY S L+G+A + K N
Sbjct: 129 KVDRPGSRPDWVLNQTFDLFDKLGATDEQLDFPVIYASGLNGWACLDLKDAPSNGGSASD 188
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLF+ +LK+VP + + PLQLQ+ +L+YS++ G++G+GR+L+GRIK Q VV+MN
Sbjct: 189 MKPLFDTVLKFVPTPPGSPDAPLQLQLAALDYSTFTGRLGVGRVLNGRIKPGQQVVVMN- 247
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+ + +INQ+ F+GLDRV V+ A +GDI++I+G+EEI IG TICD P GLPML
Sbjct: 248 HEKQVGSGRINQVLGFQGLDRVPVDSAEAGDIIIISGLEEIGIGVTICDKDNPVGLPMLM 307
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPTLT++FMVN SPLAG EGKF+T+RQI++RL E+ N+ L+V ++ D ++ VSG
Sbjct: 308 VDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRLTKELLTNVALKV-EDTQDADVFRVSG 366
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RGELHLTIL+ENMRREG+E++V +PRV++K +NGE EPYENL +D+E+ +QG +M+++
Sbjct: 367 RGELHLTILLENMRREGFEMAVGKPRVVYKEINGEKCEPYENLSIDLEDAHQGAVMEEIG 426
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
R G+L N+E + + R RLEY IP+RGLIGFQ++F+T+TRGTGLI HVF++Y P K
Sbjct: 427 RRRGELTNMESDGQGRTRLEYHIPARGLIGFQSDFMTMTRGTGLIGHVFDDYGPV----K 482
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
DL R NGVLIS G+AVAY+LW L+DRGR+F+ D +YEGMIIGIHSRDNDL+VNP
Sbjct: 483 ADLPGRHNGVLISAEDGEAVAYALWNLEDRGRMFVVPGDKLYEGMIIGIHSRDNDLIVNP 542
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
IK K+LTN+R+SG+DEA++L + +K+TLE A+EFI+DDELVE+TPK+IR+RKR+LKE++R
Sbjct: 543 IKGKKLTNVRASGTDEAVRLTTALKLTLESAVEFIDDDELVELTPKSIRIRKRYLKEHDR 602
Query: 1520 KKKL 1523
KK +
Sbjct: 603 KKAV 606
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F+ + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFAAHQKVDVRVMDSNDLEKERGITILAKNTAIEYNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + + V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLGMVNGVLLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|296314250|ref|ZP_06864191.1| GTP-binding protein TypA/BipA [Neisseria polysaccharea ATCC 43768]
gi|296839048|gb|EFH22986.1| GTP-binding protein TypA/BipA [Neisseria polysaccharea ATCC 43768]
Length = 603
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKYTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|268601305|ref|ZP_06135472.1| GTP-binding protein TypA [Neisseria gonorrhoeae PID18]
gi|268603631|ref|ZP_06137798.1| GTP-binding protein TypA [Neisseria gonorrhoeae PID1]
gi|291043867|ref|ZP_06569583.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|268585436|gb|EEZ50112.1| GTP-binding protein TypA [Neisseria gonorrhoeae PID18]
gi|268587762|gb|EEZ52438.1| GTP-binding protein TypA [Neisseria gonorrhoeae PID1]
gi|291012330|gb|EFE04319.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 603
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGC 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 CHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|325265695|ref|ZP_08132384.1| glutathione-disulfide reductase [Kingella denitrificans ATCC 33394]
gi|324982826|gb|EGC18449.1| glutathione-disulfide reductase [Kingella denitrificans ATCC 33394]
Length = 605
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/600 (62%), Positives = 481/600 (80%), Gaps = 6/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI +KN +IEYNG
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVDERVMDSNDLEKERGITILAKNTAIEYNGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +AR WV+D TF+LFD L AT EQLDFP++Y S L G+A + +M LFE
Sbjct: 128 KIDKPSARASWVIDQTFELFDALGATNEQLDFPIVYASGLSGFARLEEDGTETDMRVLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ PLQLQI L+Y +Y G++GIGRIL+G IK V +MN D +
Sbjct: 188 TILKHTPPPSGDADAPLQLQISQLDYDNYTGRLGIGRILNGHIKPGMQVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+INQ+ FKGL+RV +EA +GDIV+I+GI+EI IG TICD P G+PML++DEPTL
Sbjct: 247 TGRINQLLGFKGLERVPQDEAEAGDIVIISGIDEIGIGVTICDKDNPMGVPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQRELLTNVALRV-EDTEDADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ +NG+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYREINGQKCEPYENLTVDVPDENQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+T+TRGTGL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTMTRGTGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKRFL E+ER+++ +
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPQSIRLRKRFLTEHERRRQFSQ 601
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVDERVMDSNDLEKERGITILAKNTAIEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|340788625|ref|YP_004754090.1| translation initiation factor 2 [Collimonas fungivorans Ter331]
gi|340553892|gb|AEK63267.1| Translation initiation factor 2 [Collimonas fungivorans Ter331]
Length = 946
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/539 (68%), Positives = 464/539 (86%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK+LMKLGQMVTINQVLDQET+MILVEEMGH AHA+KL+DPE+ L++ ++
Sbjct: 381 MSVKASEVIKHLMKLGQMVTINQVLDQETSMILVEEMGHTAHAAKLDDPEALLVD-GEEH 439
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 440 ADAELLPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETPRGMITF 499
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVPL+VAINKIDK
Sbjct: 500 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINKIDK 559
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
NLDR+KQ+LI+EQV+PEEYGG SPF+ +SAKTG GI+ LLE + LQAE+LELKA V
Sbjct: 560 PGGNLDRVKQELIAEQVVPEEYGGESPFVPVSAKTGEGIDNLLEQVLLQAEVLELKAAVA 619
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G+++E+RLDKG+GPVAT+L+QSGTL+ D+V+AG++YGR+R+ML+ENGK I EAGP
Sbjct: 620 APARGLVVEARLDKGRGPVATILVQSGTLKRGDVVLAGSAYGRVRAMLDENGKAISEAGP 679
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +GEE+ V+ +E+KAREIG FRQGK+RDVKL+KQ+ K ENMF+ +
Sbjct: 680 SIPVEIQGLTEVPVAGEEVMVMADERKAREIGQFRQGKYRDVKLAKQQAAKLENMFDQMA 739
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +IIKTDV GS+E L +SL+ LST +V++QV+H VG I+ESD+NLA+ASKA+
Sbjct: 740 EGEVKNLPMIIKTDVQGSQEALVQSLQKLSTSEVRVQVVHAGVGGISESDVNLAVASKAV 799
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADAS RKLA+ N ++IRY+NIIY+ + EIK+ ++ ++ EK+E LGL EIRQ
Sbjct: 800 IIGFNARADASARKLAEANGVDIRYYNIIYDAVDEIKAAMSGMLSPEKREQNLGLVEIRQ 859
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V+LV+KV IAGCY+LEGL++R + +R+LR+ ++WTGELDSLKRFKD+VKEV++GFEC
Sbjct: 860 VLLVSKVGAIAGCYVLEGLVKRGASVRLLRDNVVLWTGELDSLKRFKDDVKEVRSGFEC 918
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 453 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETPRGMITF------------ 499
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 500 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINK 556
Query: 1047 IDR 1049
ID+
Sbjct: 557 IDK 559
>gi|319638150|ref|ZP_07992913.1| GTP-binding protein TypA [Neisseria mucosa C102]
gi|317400423|gb|EFV81081.1| GTP-binding protein TypA [Neisseria mucosa C102]
Length = 603
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ + R+MDSN++EKERGITI +KN +IEY G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRSNQQVEERVMDSNDLEKERGITILAKNTAIEYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLFE
Sbjct: 128 KIDKPSARPSWVIDQTFELFDSLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN +++
Sbjct: 188 TILKHTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EEQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F+GL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFQGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+EL+V +PRV+F+ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGFELAVGKPRVVFREIDGQKCEPYENLTVDVPDENQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGTGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND VYEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKVYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRSNQQVEERVMDSNDLEKERGITILAKNTAIEYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|429744761|ref|ZP_19278225.1| GTP-binding protein TypA [Neisseria sp. oral taxon 020 str. F0370]
gi|429162119|gb|EKY04469.1| GTP-binding protein TypA [Neisseria sp. oral taxon 020 str. F0370]
Length = 603
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/601 (62%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +IEY G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIEYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ AR WV+D TFDLFD L ATEEQLDFP++Y S L G+A + +M PLF+
Sbjct: 128 KIDKPTARASWVIDQTFDLFDNLGATEEQLDFPIVYASGLSGFAKLDENDDSSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPAPSGDADAPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-ETQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTIADRDNPVGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+F+ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVFREIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+T+TRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTMTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLISQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPQSIRLRKRYLSEIERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIEYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|121634897|ref|YP_975142.1| GTP-binding protein [Neisseria meningitidis FAM18]
gi|304387538|ref|ZP_07369727.1| GTP-binding protein TypA/BipA [Neisseria meningitidis ATCC 13091]
gi|385340096|ref|YP_005893968.1| GTP-binding protein TypA/BipA [Neisseria meningitidis G2136]
gi|385855251|ref|YP_005901764.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M01-240355]
gi|416161598|ref|ZP_11606506.1| GTP-binding protein TypA/BipA [Neisseria meningitidis N1568]
gi|416204444|ref|ZP_11620274.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 961-5945]
gi|421540418|ref|ZP_15986564.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 93004]
gi|421544430|ref|ZP_15990506.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM140]
gi|421546542|ref|ZP_15992587.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM183]
gi|421548793|ref|ZP_15994817.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM2781]
gi|421550677|ref|ZP_15996678.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 69166]
gi|421552746|ref|ZP_15998718.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM576]
gi|433467302|ref|ZP_20424757.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 87255]
gi|433469350|ref|ZP_20426772.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 98080]
gi|433471493|ref|ZP_20428879.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 68094]
gi|433473577|ref|ZP_20430938.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 97021]
gi|433477628|ref|ZP_20434948.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 70012]
gi|433482140|ref|ZP_20439400.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 2006087]
gi|433484122|ref|ZP_20441348.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 2002038]
gi|433486341|ref|ZP_20443537.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 97014]
gi|433494711|ref|ZP_20451779.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM762]
gi|433496876|ref|ZP_20453915.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M7089]
gi|433498941|ref|ZP_20455950.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M7124]
gi|433500906|ref|ZP_20457892.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM174]
gi|433526232|ref|ZP_20482862.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 69096]
gi|433536741|ref|ZP_20493246.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 77221]
gi|433538962|ref|ZP_20495438.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 70030]
gi|120866603|emb|CAM10354.1| putative GTP-binding protein [Neisseria meningitidis FAM18]
gi|304338425|gb|EFM04546.1| GTP-binding protein TypA/BipA [Neisseria meningitidis ATCC 13091]
gi|325128251|gb|EGC51136.1| GTP-binding protein TypA/BipA [Neisseria meningitidis N1568]
gi|325142364|gb|EGC64773.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 961-5945]
gi|325198340|gb|ADY93796.1| GTP-binding protein TypA/BipA [Neisseria meningitidis G2136]
gi|325204192|gb|ADY99645.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M01-240355]
gi|389605713|emb|CCA44630.1| GTP-binding protein lepA [Neisseria meningitidis alpha522]
gi|402319055|gb|EJU54567.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 93004]
gi|402322787|gb|EJU58237.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM183]
gi|402323621|gb|EJU59063.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM140]
gi|402325472|gb|EJU60881.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM2781]
gi|402329214|gb|EJU64575.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 69166]
gi|402329925|gb|EJU65274.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM576]
gi|432202744|gb|ELK58802.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 87255]
gi|432204033|gb|ELK60080.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 98080]
gi|432208345|gb|ELK64323.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 68094]
gi|432209875|gb|ELK65841.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 97021]
gi|432215293|gb|ELK71182.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 70012]
gi|432215933|gb|ELK71816.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 2006087]
gi|432220808|gb|ELK76625.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 2002038]
gi|432222154|gb|ELK77953.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 97014]
gi|432229914|gb|ELK85593.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM762]
gi|432233988|gb|ELK89611.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M7089]
gi|432234775|gb|ELK90395.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M7124]
gi|432236197|gb|ELK91806.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM174]
gi|432260996|gb|ELL16253.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 69096]
gi|432273324|gb|ELL28422.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 70030]
gi|432273677|gb|ELL28774.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 77221]
Length = 603
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|404380205|ref|ZP_10985243.1| GTP-binding protein TypA/BipA [Simonsiella muelleri ATCC 29453]
gi|294482401|gb|EFG30095.1| GTP-binding protein TypA/BipA [Simonsiella muelleri ATCC 29453]
Length = 605
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/598 (62%), Positives = 481/598 (80%), Gaps = 6/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN+IEKERGITI +KN +IEYNG
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRDNQQVDERVMDSNDIEKERGITILAKNTAIEYNGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALGLGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +AR WV+D TF+LFD L AT+EQLDFP++Y S L G+A + +M LFE
Sbjct: 128 KIDKPSARASWVIDQTFELFDSLGATDEQLDFPIVYASGLSGFARLEEDGTEDDMRVLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P ++N PLQLQI L+Y +Y G++GIGR+L+G+I+ V +MN + +
Sbjct: 188 TILKHTPEPSGDANAPLQLQISQLDYDNYTGRLGIGRVLNGKIRPSMQVAVMNH-ETQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+INQ+ FKGL+RV +EA +GDIV+I+GIE+I IG TICD P G+PML++DEPTL
Sbjct: 247 TGRINQLLGFKGLERVPQDEAEAGDIVIISGIEDIGIGVTICDKENPMGVPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLTKELLTNVALRV-EDTEDADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ +NG+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYREINGQKCEPYENLTVDVPDENQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+T+TRGTGL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTMTRGTGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E+ER+++
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPQSIRLRKRYLSEHERRRQF 599
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRDNQQVDERVMDSNDIEKERGITILAKNTAIEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALGLGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|254804986|ref|YP_003083207.1| GTP-binding elongation factor [Neisseria meningitidis alpha14]
gi|421563381|ref|ZP_16009200.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM2795]
gi|421906930|ref|ZP_16336818.1| GTP-binding protein lepA [Neisseria meningitidis alpha704]
gi|254668528|emb|CBA05931.1| GTP-binding elongation factor [Neisseria meningitidis alpha14]
gi|393291894|emb|CCI72771.1| GTP-binding protein lepA [Neisseria meningitidis alpha704]
gi|402341077|gb|EJU76264.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM2795]
Length = 603
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/601 (62%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN D +
Sbjct: 188 TILKYTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|15677072|ref|NP_274224.1| GTP-binding protein TypA [Neisseria meningitidis MC58]
gi|385324142|ref|YP_005878581.1| putative GTP-binding protein TypA (tyrosine-phosphorylated protein A)
[Neisseria meningitidis 8013]
gi|385328449|ref|YP_005882752.1| putative GTP-binding protein [Neisseria meningitidis alpha710]
gi|385341892|ref|YP_005895763.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M01-240149]
gi|385853162|ref|YP_005899676.1| GTP-binding protein TypA/BipA [Neisseria meningitidis H44/76]
gi|385857259|ref|YP_005903771.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NZ-05/33]
gi|416170833|ref|ZP_11608484.1| GTP-binding protein TypA/BipA [Neisseria meningitidis OX99.30304]
gi|416187797|ref|ZP_11614409.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M0579]
gi|416196472|ref|ZP_11618242.1| GTP-binding protein TypA/BipA [Neisseria meningitidis CU385]
gi|416213333|ref|ZP_11622276.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M01-240013]
gi|421542479|ref|ZP_15988586.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM255]
gi|421557280|ref|ZP_16003185.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 80179]
gi|421561245|ref|ZP_16007093.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM2657]
gi|427827083|ref|ZP_18994127.1| GTP-binding protein TypA/BipA [Neisseria meningitidis H44/76]
gi|433465143|ref|ZP_20422625.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM422]
gi|433488478|ref|ZP_20445640.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M13255]
gi|433490524|ref|ZP_20447650.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM418]
gi|433505095|ref|ZP_20462034.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 9506]
gi|433507206|ref|ZP_20464114.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 9757]
gi|433509284|ref|ZP_20466153.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 12888]
gi|433511411|ref|ZP_20468238.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 4119]
gi|7226435|gb|AAF41581.1| GTP-binding protein TypA [Neisseria meningitidis MC58]
gi|261392529|emb|CAX50084.1| putative GTP-binding protein TypA (tyrosine-phosphorylated protein A)
[Neisseria meningitidis 8013]
gi|308389301|gb|ADO31621.1| putative GTP-binding protein [Neisseria meningitidis alpha710]
gi|316985051|gb|EFV64004.1| GTP-binding protein TypA/BipA [Neisseria meningitidis H44/76]
gi|325130255|gb|EGC53024.1| GTP-binding protein TypA/BipA [Neisseria meningitidis OX99.30304]
gi|325136306|gb|EGC58914.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M0579]
gi|325140566|gb|EGC63087.1| GTP-binding protein TypA/BipA [Neisseria meningitidis CU385]
gi|325144424|gb|EGC66724.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M01-240013]
gi|325200166|gb|ADY95621.1| GTP-binding protein TypA/BipA [Neisseria meningitidis H44/76]
gi|325202098|gb|ADY97552.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M01-240149]
gi|325208148|gb|ADZ03600.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NZ-05/33]
gi|402317309|gb|EJU52847.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM255]
gi|402334918|gb|EJU70193.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 80179]
gi|402338708|gb|EJU73938.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM2657]
gi|432203087|gb|ELK59141.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM422]
gi|432223311|gb|ELK79092.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M13255]
gi|432227515|gb|ELK83224.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM418]
gi|432241220|gb|ELK96750.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 9506]
gi|432241571|gb|ELK97100.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 9757]
gi|432246672|gb|ELL02118.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 12888]
gi|432247459|gb|ELL02896.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 4119]
Length = 603
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/601 (62%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN D +
Sbjct: 188 TILKYTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQTVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|433541032|ref|ZP_20497484.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 63006]
gi|432277045|gb|ELL32094.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 63006]
Length = 603
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|225076472|ref|ZP_03719671.1| hypothetical protein NEIFLAOT_01518 [Neisseria flavescens
NRL30031/H210]
gi|224952151|gb|EEG33360.1| hypothetical protein NEIFLAOT_01518 [Neisseria flavescens
NRL30031/H210]
Length = 603
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/601 (62%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ + R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRSNQQVEERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESSDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ PLQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPAPSGSADEPLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG IM++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAIMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRSNQQVEERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|218768212|ref|YP_002342724.1| GTP-binding protein [Neisseria meningitidis Z2491]
gi|385338044|ref|YP_005891917.1| putative GTP-binding protein TypA (tyrosine-phosphorylated protein A)
[Neisseria meningitidis WUE 2594]
gi|418288393|ref|ZP_12900881.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM233]
gi|418290620|ref|ZP_12902752.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM220]
gi|421538126|ref|ZP_15984303.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 93003]
gi|421559167|ref|ZP_16005042.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 92045]
gi|421567517|ref|ZP_16013251.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM3001]
gi|433475714|ref|ZP_20433052.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 88050]
gi|433479818|ref|ZP_20437108.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 63041]
gi|433513499|ref|ZP_20470290.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 63049]
gi|433515782|ref|ZP_20472551.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 2004090]
gi|433517565|ref|ZP_20474311.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 96023]
gi|433519953|ref|ZP_20476673.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 65014]
gi|433521890|ref|ZP_20478581.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 61103]
gi|433524145|ref|ZP_20480806.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 97020]
gi|433528247|ref|ZP_20484856.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM3652]
gi|433530446|ref|ZP_20487035.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM3642]
gi|433532675|ref|ZP_20489239.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 2007056]
gi|433534358|ref|ZP_20490900.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 2001212]
gi|121052220|emb|CAM08543.1| putative GTP-binding protein [Neisseria meningitidis Z2491]
gi|319410458|emb|CBY90818.1| putative GTP-binding protein TypA (tyrosine-phosphorylated protein A)
[Neisseria meningitidis WUE 2594]
gi|372201254|gb|EHP15201.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM220]
gi|372201953|gb|EHP15821.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM233]
gi|402316945|gb|EJU52484.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 93003]
gi|402336562|gb|EJU71822.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 92045]
gi|402343550|gb|EJU78696.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM3001]
gi|432209366|gb|ELK65334.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 88050]
gi|432216157|gb|ELK72039.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 63041]
gi|432248063|gb|ELL03497.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 63049]
gi|432253199|gb|ELL08544.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 2004090]
gi|432253301|gb|ELL08645.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 96023]
gi|432254675|gb|ELL10009.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 65014]
gi|432259389|gb|ELL14660.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 97020]
gi|432259707|gb|ELL14977.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 61103]
gi|432265048|gb|ELL20244.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM3652]
gi|432266953|gb|ELL22134.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM3642]
gi|432267191|gb|ELL22371.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 2007056]
gi|432271959|gb|ELL27076.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 2001212]
Length = 603
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/601 (62%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN D +
Sbjct: 188 TILKYTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|417958337|ref|ZP_12601252.1| GTP-binding protein TypA/BipA [Neisseria weaveri ATCC 51223]
gi|343966995|gb|EGV35246.1| GTP-binding protein TypA/BipA [Neisseria weaveri ATCC 51223]
Length = 603
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/601 (61%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN+IEKERGITI +KN +IEY G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDIEKERGITILAKNTAIEYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLRPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDSLGATDEQLDFPIVYASGLSGFAKLEEDDESQDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPPPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EKQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTEDADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+F+ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVFREIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ + +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPGEKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L+E+ER+K K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPQSIRLRKRYLQEHERRKHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDIEKERGITILAKNTAIEYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLRPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|350570801|ref|ZP_08939147.1| glutathione-disulfide reductase [Neisseria wadsworthii 9715]
gi|349794749|gb|EGZ48559.1| glutathione-disulfide reductase [Neisseria wadsworthii 9715]
Length = 603
Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/600 (62%), Positives = 480/600 (80%), Gaps = 6/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN+IEKERGITI +KN +IEY G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDIEKERGITILAKNTAIEYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLRPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP+IY S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDSLGATDEQLDFPIIYASGLSGFAKLEESDESKDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPPPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EKQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTEDADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYREIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G+AVAY+LW L+DRGR+F++ D +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLISQEQGEAVAYALWNLEDRGRMFVSPGDKLYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +P+K+TLE A+EFI+DDELVEITP++IRLRKR+L+E+ER+K K
Sbjct: 542 TNVRASGTDEAVRLTTPVKLTLESAVEFIDDDELVEITPQSIRLRKRYLQEHERRKHFKK 601
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDIEKERGITILAKNTAIEYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLRPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|385851197|ref|YP_005897712.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M04-240196]
gi|416178122|ref|ZP_11610433.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M6190]
gi|416192180|ref|ZP_11616461.1| GTP-binding protein TypA/BipA [Neisseria meningitidis ES14902]
gi|421554781|ref|ZP_16000720.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 98008]
gi|433492566|ref|ZP_20449659.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM586]
gi|433503089|ref|ZP_20460050.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM126]
gi|325132229|gb|EGC54923.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M6190]
gi|325138154|gb|EGC60725.1| GTP-binding protein TypA/BipA [Neisseria meningitidis ES14902]
gi|325206020|gb|ADZ01473.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M04-240196]
gi|402331934|gb|EJU67265.1| GTP-binding protein TypA/BipA [Neisseria meningitidis 98008]
gi|432228352|gb|ELK84052.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM586]
gi|432239854|gb|ELK95398.1| GTP-binding protein TypA/BipA [Neisseria meningitidis NM126]
Length = 603
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/601 (61%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKYTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKENPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|416182934|ref|ZP_11612334.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M13399]
gi|325134317|gb|EGC56963.1| GTP-binding protein TypA/BipA [Neisseria meningitidis M13399]
Length = 603
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/601 (61%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYAGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILKY P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKYTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKENPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYAG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|398832204|ref|ZP_10590368.1| translation initiation factor IF-2 [Herbaspirillum sp. YR522]
gi|398223741|gb|EJN10076.1| translation initiation factor IF-2 [Herbaspirillum sp. YR522]
Length = 946
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/539 (68%), Positives = 458/539 (84%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK++MKLGQMVTINQVLDQETAMI+VEEMGH AH +K +DPE+ L+ E ++
Sbjct: 381 MAVKASEVIKHMMKLGQMVTINQVLDQETAMIVVEEMGHRAHPAKEDDPEALLV-EGEEH 439
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 440 ADAELLPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETPRGMITF 499
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 500 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 559
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N DR+KQ+LI+EQV+PEEYGG SPFI +SAKTG GI+ LLEN+ LQAE+LEL AP+
Sbjct: 560 PGANSDRVKQELIAEQVVPEEYGGDSPFIEVSAKTGAGIDSLLENVLLQAEVLELTAPIN 619
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G++IE++LDKG+GPVAT+L+QSGTL+ D+V+AG+SYGR+R+M++E GK+I EAGP
Sbjct: 620 VPARGLVIEAKLDKGRGPVATILVQSGTLKRGDVVLAGSSYGRVRAMVDETGKSITEAGP 679
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +GEE V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF +
Sbjct: 680 SIPVEIQGLTEVPSAGEETLVMTDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFEQMG 739
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +IIKTDV GS+E L SL+ LST +V++QV+H AVG I+ESD+NLA+ASKA+
Sbjct: 740 EGEVKNLPLIIKTDVQGSQEALVHSLQKLSTGEVRVQVVHAAVGGISESDVNLAVASKAV 799
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADAS RKLA+ + ++IRY+NIIY+ + ++K+ ++ ++ EK+E LGL EIRQ
Sbjct: 800 IIGFNTRADASARKLAESSGVDIRYYNIIYDAVDDVKAAMSGMLAPEKREQALGLVEIRQ 859
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V LV+KV IAGCY+LEGL++R S +R+LRN ++WTGELDSLKRFKD+ KEVK+GFEC
Sbjct: 860 VFLVSKVGAIAGCYVLEGLVKRGSSVRLLRNNVVVWTGELDSLKRFKDDAKEVKSGFEC 918
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 453 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETPRGMITF------------ 499
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 500 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 556
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A + V + +++ E D P I SA G
Sbjct: 557 IDKPGANSDRVKQEL--IAEQVVPEEYGGDSPFIEVSAKTG 595
>gi|255065230|ref|ZP_05317085.1| GTP-binding protein TypA/BipA [Neisseria sicca ATCC 29256]
gi|255050651|gb|EET46115.1| GTP-binding protein TypA/BipA [Neisseria sicca ATCC 29256]
Length = 603
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/601 (62%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ I+ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQIDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN D +
Sbjct: 188 TILKHTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+EL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGFELAVGKPRVVYRDIDGQKCEPYENLTVDVPDENQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLISQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F I + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQIDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|261377835|ref|ZP_05982408.1| GTP-binding protein TypA/BipA [Neisseria cinerea ATCC 14685]
gi|269146138|gb|EEZ72556.1| GTP-binding protein TypA/BipA [Neisseria cinerea ATCC 14685]
Length = 603
Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/601 (61%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN+IEKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDIEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P + +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN D +
Sbjct: 188 TILKHTPAPRGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKENPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSR+NDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRENDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDIEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|340363252|ref|ZP_08685595.1| glutathione-disulfide reductase [Neisseria macacae ATCC 33926]
gi|349609923|ref|ZP_08889289.1| GTP-binding protein TypA/BipA [Neisseria sp. GT4A_CT1]
gi|419797291|ref|ZP_14322782.1| GTP-binding protein TypA [Neisseria sicca VK64]
gi|339886299|gb|EGQ75961.1| glutathione-disulfide reductase [Neisseria macacae ATCC 33926]
gi|348611029|gb|EGY60704.1| GTP-binding protein TypA/BipA [Neisseria sp. GT4A_CT1]
gi|385698411|gb|EIG28774.1| GTP-binding protein TypA [Neisseria sicca VK64]
Length = 603
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/601 (62%), Positives = 479/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN D +
Sbjct: 188 TILKHTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+EL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGFELAVGKPRVVYRDIDGQKCEPYENLTVDVPDENQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLISQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|325980886|ref|YP_004293288.1| GTP-binding protein TypA [Nitrosomonas sp. AL212]
gi|325530405|gb|ADZ25126.1| GTP-binding protein TypA [Nitrosomonas sp. AL212]
Length = 604
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/596 (62%), Positives = 481/596 (80%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL Q+GTF +Q I+ R+MDSN+IE+ERGITI +KNC+I+Y G
Sbjct: 9 AIIAHVDHGKTTMVDKLLHQAGTFAAHQQISERVMDSNDIERERGITILAKNCAIDYEGI 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR WVVD TFDLFDKL A+EEQLDFPV+Y SAL+G+A + +M PLF+
Sbjct: 129 KIDRPGARAGWVVDQTFDLFDKLGASEEQLDFPVVYASALNGFATLDMDKSSADMRPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL+YVP + N + PLQLQI +L+YSS++G+IGIGRI G++K Q+V+++ G D P
Sbjct: 189 TILRYVPAPEGNPDEPLQLQISALDYSSFVGRIGIGRIHRGKLKPGQEVMVLTG-DKSPK 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAK+NQ+ F+GL+R+ + EAL+GDIVLI G+E++ IG+T+ +P LP+L +DEPTL
Sbjct: 248 KAKVNQVLGFRGLERIQMKEALAGDIVLINGVEDLSIGTTLASIDQPEALPILAVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+RQ++ RL+ E+ N+ LR+ DS + +SGRGELHL
Sbjct: 308 TMTFQVNTSPFAGQEGKFVTSRQLRERLERELLTNVALRMEDTNETDS-FLISGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRP V+ + ++G EP+E L VD++E NQG +M+ L R GDL
Sbjct: 367 TILLENMRREGYELAVSRPHVVIREIDGIKCEPFEMLTVDVDEANQGAVMEALGARRGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+YRIP+RGLIGFQ+EF+T+TRGTGL+SHVF+E+AP + ++ R
Sbjct: 427 QDMVSDAKGRVRLDYRIPARGLIGFQSEFMTMTRGTGLMSHVFDEFAPM----RPEIPPR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLIS G+AVAY+LWKLQDRGR+F++ D +YEGM+IGIH+RDNDL+VNPIK KQL
Sbjct: 483 RNGVLISAEQGEAVAYALWKLQDRGRMFVSPGDRLYEGMVIGIHTRDNDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEA+ LI PI++TLE AIEFI DDELVEITPK IR+RKR L E+ERK+
Sbjct: 543 TNIRASGTDEAVTLIPPIQLTLESAIEFIADDELVEITPKTIRIRKRHLLEHERKR 598
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + F+ I++ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDKLLHQAGTFAAHQQISERVMDSNDIERERGITILAKNCAIDYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 IHINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|261364600|ref|ZP_05977483.1| GTP-binding protein TypA/BipA [Neisseria mucosa ATCC 25996]
gi|288567187|gb|EFC88747.1| GTP-binding protein TypA/BipA [Neisseria mucosa ATCC 25996]
Length = 603
Score = 791 bits (2043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/601 (61%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ+++ R+MDSN+IEKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQHVDERVMDSNDIEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN D +
Sbjct: 188 TILKHTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-DQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYRDIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSR+NDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRENDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQHVDERVMDSNDIEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|345875601|ref|ZP_08827393.1| GTP-binding protein TypA/BipA [Neisseria weaveri LMG 5135]
gi|343968894|gb|EGV37116.1| GTP-binding protein TypA/BipA [Neisseria weaveri LMG 5135]
Length = 603
Score = 791 bits (2042), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/601 (62%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN+IEKERGITI +KN +IEY G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDIEKERGITILAKNTAIEYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLRPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDSLGATDEQLDFPIVYASGLSGFAKLEEDDESQDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPPPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EKQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D I+ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTEDADIFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYREIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G+AVAY+LW L+DRGR+F++ + +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLISQEQGEAVAYALWNLEDRGRMFVSPGEKLYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L+E+ER+K K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPQSIRLRKRYLQEHERRKHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDIEKERGITILAKNTAIEYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLRPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|372489059|ref|YP_005028624.1| GTP-binding protein TypA/BipA [Dechlorosoma suillum PS]
gi|359355612|gb|AEV26783.1| GTP-binding protein TypA/BipA [Dechlorosoma suillum PS]
Length = 604
Score = 790 bits (2041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/596 (63%), Positives = 488/596 (81%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI +KN +IEY GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVDERVMDSNDLEKERGITILAKNTAIEYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DAVEGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALGLGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD TFDLFDKL AT+EQLDFP+IY S L+G+A + + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQTFDLFDKLGATDEQLDFPIIYASGLNGFAKLSLEEESSDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+L +VP + PLQLQI +L+YS+Y G++G+GR+L+GRIK Q V +MN D+
Sbjct: 189 TVLSHVPTPAGDPEAPLQLQIAALDYSTYTGRLGVGRVLNGRIKPGQAVAVMNH-GDQVA 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+INQ+ F+GLDRV V A +GDIV+I+GIEEI IG TI D P GLPML +DEPTL
Sbjct: 248 SGRINQVLGFQGLDRVPVELAEAGDIVIISGIEEIGIGLTIADKDNPVGLPMLTVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN+SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 308 TMDFMVNSSPLAGTEGKFVTSRQIRDRLTKELLTNVALRV-EDTADSDVFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+E++V++PRV+FK ++GE EPYENL +D+E+ +QG +M++L R G+L
Sbjct: 367 TILLENMRREGFEIAVAKPRVVFKDIDGEKCEPYENLTIDLEDSHQGAVMEELGRRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + + R RLEY IP+RGLIGFQ++F+T+TRGTGL+SH+F++Y P K DL R
Sbjct: 427 TNMESDGQGRTRLEYHIPARGLIGFQSDFMTMTRGTGLMSHIFDDYKPV----KPDLPGR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ +G+AVAY+LW L+DRGR+F++ D +YEGMIIGIHSR+NDL+VNPIK K+L
Sbjct: 483 HNGVLISQENGEAVAYALWNLEDRGRMFVSPGDKLYEGMIIGIHSRENDLVVNPIKGKKL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITPK+IR+RKR L EN+RK+
Sbjct: 543 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPKSIRIRKRHLSENDRKR 598
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVDERVMDSNDLEKERGITILAKNTAIEYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALGLGLRPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|349574877|ref|ZP_08886809.1| glutathione-disulfide reductase [Neisseria shayeganii 871]
gi|348013564|gb|EGY52476.1| glutathione-disulfide reductase [Neisseria shayeganii 871]
Length = 602
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/600 (61%), Positives = 479/600 (79%), Gaps = 6/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN+IEKERGITI +KN +IEY G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDIEKERGITILAKNTAIEYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLRPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFDKL A++EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDKLGASDEQLDFPIVYASGLSGFAKLEEGDDNQDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPPPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EQQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTISDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D I+ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTEDADIFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+++ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVYREIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+T+TRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTMTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ + +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPGEKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITPK+IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPKSIRLRKRYLTEQERRRHFKK 601
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDIEKERGITILAKNTAIEYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLRPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|298368738|ref|ZP_06980056.1| GTP-binding protein TypA/BipA [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282741|gb|EFI24228.1| GTP-binding protein TypA/BipA [Neisseria sp. oral taxon 014 str.
F0314]
Length = 603
Score = 789 bits (2037), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/601 (61%), Positives = 480/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ+++ R+MDSN+IEKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQHVDDRVMDSNDIEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TF+LFD L AT+EQLDFP++Y S L G+A +M PLF+
Sbjct: 128 KIDKPSARPSWVIDQTFELFDNLGATDEQLDFPIVYASGLSGFAKLEETDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMNH-EQQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTITDKDNPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+EL+V +PRV+++ +NG+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGFELAVGKPRVVYREINGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSR+NDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRENDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQHVDDRVMDSNDIEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|302878585|ref|YP_003847149.1| GTP-binding protein TypA [Gallionella capsiferriformans ES-2]
gi|302581374|gb|ADL55385.1| GTP-binding protein TypA [Gallionella capsiferriformans ES-2]
Length = 604
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/600 (61%), Positives = 483/600 (80%), Gaps = 7/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL Q+G+F +Q++ R+MD+N++EKERGITI +KNC++E+ G
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQAGSFSAHQHVAERVMDNNDLEKERGITILAKNCAVEFKGV 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD VLLL+DAV+GPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVDGVLLLVDAVDGPMPQTRFVTKKALALGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD TFDLFDKL AT+EQLDFPV+Y SAL+GYA +A NM L +
Sbjct: 129 KVDRPGARPDWVVDQTFDLFDKLGATDEQLDFPVVYASALNGYAKTELEAVTDNMFALLD 188
Query: 1106 AILKYVPVHK-DNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+L +V + PLQLQI +L+YSS++G+IG+GR+ G+I+ Q+V++MNG D
Sbjct: 189 VVLSHVHAPTVAATEEPLQLQISALDYSSFVGRIGVGRVTRGKIRPGQEVMVMNG-DKSS 247
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+A++NQ+ F+G++RVL+ EA++GDIVLI GI+EI IG TI D SKP LP+ IDEPT
Sbjct: 248 KRARVNQVLGFRGIERVLLEEAMAGDIVLINGIDEIGIGVTIADMSKPEALPLPKIDEPT 307
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
L++N MVN SPL G+EGK IT+RQI++RL+ E+ N+ LRV + + D ++ +SGRGELH
Sbjct: 308 LSMNLMVNTSPLCGQEGKLITSRQIRDRLNKELLVNVALRVEETDNTD-VFLLSGRGELH 366
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
LTIL+ENMRREG+E+ V +PRV+++ +NGE EP+E L VD+E+ NQG +M++L R GD
Sbjct: 367 LTILLENMRREGFEMGVGKPRVVYREINGEKCEPFEMLTVDVEDANQGAVMEELGRRRGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L++++ + RVRLEYR+P+RGLIGFQ+EF+TLTRGTG+++HVF++YAP K D+
Sbjct: 427 LQDMQPDGHGRVRLEYRVPARGLIGFQSEFMTLTRGTGIMAHVFDDYAPV----KADMPG 482
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
RRNGVLIS G AVAY+LWKL+DRGR+ + D +YEGMIIGIHSRDNDL+VNPIK KQ
Sbjct: 483 RRNGVLISSEQGDAVAYALWKLEDRGRMIVVPGDKLYEGMIIGIHSRDNDLIVNPIKGKQ 542
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLH 1524
LTN+RSSG+DEA++L P+++TLE A+EFI+DDELVEITP +IR+RKRFL ENERK+ +
Sbjct: 543 LTNVRSSGTDEAVRLTPPVRLTLESAVEFIDDDELVEITPVSIRVRKRFLTENERKRNVR 602
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + FS + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQAGSFSAHQHVAERVMDNNDLEKERGITILAKNCAVEFKG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 VHINIVDTPGHADFGGEVERVLGMVDGVLLLVDAVDGPMPQTRFVTKKALALGLRPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|253996646|ref|YP_003048710.1| GTP-binding protein TypA [Methylotenera mobilis JLW8]
gi|253983325|gb|ACT48183.1| GTP-binding protein TypA [Methylotenera mobilis JLW8]
Length = 602
Score = 788 bits (2036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/596 (61%), Positives = 481/596 (80%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL Q+GTF +Q ++ R+MDS +IEKERGITI +KN ++ Y GT
Sbjct: 9 AIIAHVDHGKTTMVDKLLHQAGTFSSHQAVSERVMDSGDIEKERGITILAKNTALNYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR +R +WV+D TFDLF L AT+EQLDFPV++ SAL+G+A + NM PLFE
Sbjct: 129 KVDRPGSRTDWVIDQTFDLFANLGATDEQLDFPVVFASALNGFATLDMSVASDNMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL +V K +SN PLQ+QI +L+YS+Y G++G+GR+ +GRIK Q VV+MN D++
Sbjct: 189 TILSHVEPPKGDSNAPLQMQISALDYSTYTGRLGVGRVRNGRIKPGQVVVVMN-EDNQIA 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F+GL+RV V EA +GDIV+I+G+++I IG TICD P GLP L +DEPTL
Sbjct: 248 QGRINQVLGFRGLERVPVEEAEAGDIVIISGLDDIGIGFTICDRENPVGLPHLGVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 308 TMDFMVNTSPLAGTEGKFVTSRQIRDRLTKELLVNVALRV-EDTQDADVFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+E++V +PRV+++ +NGE EPYE L VD+E+ NQG +M++L R G++
Sbjct: 367 TILLENMRREGFEMAVGKPRVVYREINGEKCEPYEILTVDVEDENQGGVMEELGRRRGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + R RLEY+IP+RGLIGFQ EF+TLTRGTGL++H+F+EYAP K D+ R
Sbjct: 427 QNMESDGNGRTRLEYKIPARGLIGFQGEFLTLTRGTGLMAHIFDEYAPV----KADMPGR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLIS G+AVAY+LWKLQDRGR+F D +YEGM+IGIHSRDNDL+VNPIK KQL
Sbjct: 483 RNGVLISAEQGEAVAYALWKLQDRGRMFSVPGDKLYEGMVIGIHSRDNDLIVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++LI P+ ++LE A+EFI+DDELVEITPKNIR+RKR+L E+ERK+
Sbjct: 543 TNVRASGTDEAVRLIPPVALSLESAVEFIDDDELVEITPKNIRIRKRYLLEHERKR 598
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------EAGGITQHIG----AYNVVTNHGS 117
+ I+ HVDHGKT+++D + FS ++G I + G A N N+
Sbjct: 8 IAIIAHVDHGKTTMVDKLLHQAGTFSSHQAVSERVMDSGDIEKERGITILAKNTALNYEG 67
Query: 118 --ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|238021927|ref|ZP_04602353.1| hypothetical protein GCWU000324_01831 [Kingella oralis ATCC 51147]
gi|237866541|gb|EEP67583.1| hypothetical protein GCWU000324_01831 [Kingella oralis ATCC 51147]
Length = 603
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/601 (61%), Positives = 477/601 (79%), Gaps = 6/601 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ + R+MDSN++EKERGITI +KN +IEYNG
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVEERVMDSNDLEKERGITILAKNTAIEYNGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLRPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +AR WV+D TF+LFD L A++EQLDFP++Y S L G+A + +M LFE
Sbjct: 128 KIDKPSARASWVIDQTFELFDSLGASDEQLDFPIVYASGLSGFARLEEDGSETDMRVLFE 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P ++N PLQLQI L+Y +Y G++GIGRIL+G+I+ V +MN + +
Sbjct: 188 TILKHTPEPSGDANAPLQLQISQLDYDNYTGRLGIGRILNGKIRPGMQVAVMNH-ETQIA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+INQ+ FKGL+RV EA +GDIV+I+GI+EI IG TICD P G+PML++DEPTL
Sbjct: 247 TGRINQLLGFKGLERVPQEEAEAGDIVIISGIDEIGIGVTICDKENPVGVPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLTRELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+EL+V +PRV+F+ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGFELAVGKPRVVFREIDGQKCEPYENLTVDVPDENQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRGTGL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGTGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA++L PIK+TLE A+EFI+DDELVEITP++IRLRKR+L E ER++ K
Sbjct: 542 TNVRASGTDEAVRLTPPIKLTLEGAVEFIDDDELVEITPQSIRLRKRYLSELERRRHFKK 601
Query: 1526 F 1526
Sbjct: 602 L 602
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVEERVMDSNDLEKERGITILAKNTAIEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLRPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|383758674|ref|YP_005437659.1| GTP-binding protein TypA [Rubrivivax gelatinosus IL144]
gi|381379343|dbj|BAL96160.1| GTP-binding protein TypA [Rubrivivax gelatinosus IL144]
Length = 609
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/600 (61%), Positives = 479/600 (79%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR N+ I R+MDSN+IE+ERGITI +KNC++ + T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRDNEKIAERVMDSNDIERERGITILAKNCAVRWQDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYA----NENSKARQGNMI 1101
K+D+ +RP++V++A FDLFDKL AT++QLDFPV+Y S L+G+A E +A +M
Sbjct: 129 KVDKPGSRPDYVINAAFDLFDKLGATDDQLDFPVVYASGLNGWAALEEGEPGEAWGTDMA 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
PLFE IL++VP H+ ++ PLQLQI SL+YS+++G+IG+GR+ SG +K QDV++M GPD
Sbjct: 189 PLFETILRHVPAHEGSAEAPLQLQISSLDYSTFVGRIGVGRVNSGTLKPAQDVLVMEGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
+ K +INQ+ F+GL+RV+ +EA GDIVL+ GIE++ IG T+ DP+ P LPML++D
Sbjct: 249 GRSYKGRINQVLKFEGLNRVMADEAGPGDIVLVNGIEDVAIGVTLTDPANPQPLPMLSVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV ++ +D I+EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQSNVALRVKESG-EDGIFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+F GE EP E + VD+E+ +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVFHDDGGERQEPIELVTVDVEDQHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E++ + RVRLEYRIP+RGLIGF NEF+ LTRGTGLIS++F+ Y + K +
Sbjct: 428 KGELANMEVDGRGRVRLEYRIPARGLIGFSNEFMNLTRGTGLISNIFDGYEAY----KGE 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ R+NGVLIS G+ + Y+L KL DRGR+F+ D YEGMI+GIHSRDNDL+VN +
Sbjct: 484 IAGRKNGVLISMDDGEIITYALGKLDDRGRMFVKPGDPTYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI++TLEYA+EFI DDELVEITPK+IR+RKR LKE++RK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIELTLEYAVEFIEDDELVEITPKSIRIRKRHLKEHDRKR 603
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + I + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRDNEKIAERVMDSNDIERERGITILAKNCAVRWQD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDK 180
NK+DK
Sbjct: 128 NKVDK 132
>gi|337279601|ref|YP_004619073.1| GTP-binding elongation factor [Ramlibacter tataouinensis TTB310]
gi|334730678|gb|AEG93054.1| Candidate GTP-binding elongation factor [Ramlibacter tataouinensis
TTB310]
Length = 610
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/604 (61%), Positives = 480/604 (79%), Gaps = 9/604 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IE+ERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWQGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG +PI+VVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPILVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ ARP+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 130 KVDKPGARPQHVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSMEEGAAGEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ ILK+VP H+ + PLQLQI +L++S+++G+IG+GRI +G I+ + DV++M GPD
Sbjct: 190 ALFDTILKHVPAHQGDPAEPLQLQISALDFSTFVGRIGVGRINAGTIRPMMDVLVMEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDRV V EA GDIVLI GI EI IG T+ DP+KP LPML +D
Sbjct: 250 GKSIKGRVNQVLTFQGLDRVQVTEAGPGDIVLINGIAEIGIGVTLTDPAKPTPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV + ++ ++EVSGRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQSNVALRVKETD-EEGVFEVSGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK ++G+ EP E + VDIEE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGYELAVSKPRVVFKDIDGQRCEPIELVTVDIEEQHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
GDL N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P+ + +
Sbjct: 429 KGDLVNMEPDGRGRVRLEYRIPARGLIGFSNEFLNLTRGSGLISNIFDRYEPY----RGE 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVRANDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI++TLEY +EFI DDELVEITPK+IRLRKRFLKE+ERK+
Sbjct: 545 TKQLTNFRVSGKEDAIKVTPPIELTLEYGVEFIEDDELVEITPKSIRLRKRFLKEHERKR 604
Query: 1522 KLHK 1525
L +
Sbjct: 605 ALRE 608
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWQG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPILVV 128
Query: 176 NKIDK 180
NK+DK
Sbjct: 129 NKVDK 133
>gi|332528129|ref|ZP_08404160.1| GTP-binding protein TypA [Rubrivivax benzoatilyticus JA2]
gi|332112700|gb|EGJ12493.1| GTP-binding protein TypA [Rubrivivax benzoatilyticus JA2]
Length = 609
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/600 (61%), Positives = 474/600 (79%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR N+ I R+MDSN+IE+ERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFRDNEKIAERVMDSNDIERERGITILAKNCAVTWQGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYA----NENSKARQGNMI 1101
K+D+ +RP++V++A FDLFDKL ATE+QLDFPV+Y S L+G+A +A NM
Sbjct: 129 KVDKPGSRPDYVINAAFDLFDKLGATEDQLDFPVVYASGLNGWAALEEGAPGEAWGTNMA 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
PLFE +LK+VP H+ + PLQLQI SL+YS+++G+IG+GR+ SG +K DV++M GPD
Sbjct: 189 PLFETVLKHVPPHEGDPAAPLQLQISSLDYSTFVGRIGVGRVNSGTLKPAMDVLVMEGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
+ K +INQ+ F+GL+RV+ +EA GDIVL+ GIE++ IG TI D + P LPML +D
Sbjct: 249 GRAYKGRINQVLTFEGLNRVMADEAGPGDIVLVNGIEDLGIGVTITDQANPQPLPMLRVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV ++ +D I+EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQSNVALRVRESG-EDGIFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+F GE EP E + VD+E+ +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVFHDDGGERQEPIELVTVDVEDQHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E++ + RVRLEYRIP+RGLIGF NEF+ LTRGTGLIS++F+ Y + K +
Sbjct: 428 KGELANMEVDGRGRVRLEYRIPARGLIGFSNEFMNLTRGTGLISNIFDGYEAY----KGE 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ R+NGVLIS G+ + Y+L KL DRGR+F+ D YEGMI+GIHSRDNDL+VN +
Sbjct: 484 IAGRKNGVLISMDDGEIITYALGKLDDRGRMFVKPGDPTYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI +TLEYA+EFI DDELVEITPK+IR+RKR LKE++RK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDLTLEYAVEFIEDDELVEITPKSIRIRKRHLKEHDRKR 603
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVTNHG 116
+ I+ HVDHGKT+L+D + + + F + I + + N VT G
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFRDNEKIAERVMDSNDIERERGITILAKNCAVTWQG 67
Query: 117 S-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ I +DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDK 180
NK+DK
Sbjct: 128 NKVDK 132
>gi|297538311|ref|YP_003674080.1| GTP-binding protein TypA [Methylotenera versatilis 301]
gi|297257658|gb|ADI29503.1| GTP-binding protein TypA [Methylotenera versatilis 301]
Length = 602
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/598 (61%), Positives = 477/598 (79%), Gaps = 6/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL Q+GTF +Q ++ R+MDS +IEKERGITI +KN ++ Y GT
Sbjct: 9 AIIAHVDHGKTTMVDKLLHQAGTFTGHQVVSERVMDSGDIEKERGITILAKNTALNYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
IN++DTPGHADFGGEVER+L MVD V+LL+DAVEGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 69 HINVVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WVV+ TFDLF L AT+EQLDFPV+Y SA++GYA + K NM LFE
Sbjct: 129 KVDRPGARTDWVVNQTFDLFANLGATDEQLDFPVVYASAINGYAMLDMKTPSDNMRALFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL +V + +S PLQLQI +L+YS+Y G++G+GRI +G+IK Q V +MN D +
Sbjct: 189 TILSHVAPPEGDSTAPLQLQISALDYSTYTGRLGVGRITNGKIKPGQAVTVMN-EDKQIA 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KINQ+ F+GL+RV V EA +GDIV+I+G+++I IG T+CD P GLP L +DEPTL
Sbjct: 248 VGKINQVLGFRGLERVAVEEAEAGDIVIISGLDDIGIGFTVCDRENPKGLPHLGVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 308 TMDFMVNTSPLAGTEGKFVTSRQIRDRLTKELLVNVALRV-EDTEDADVFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+E++V +P+V+++ +NGE EPYE L VD+E+ +QG M++L R G++
Sbjct: 367 TILLENMRREGFEMAVGKPKVVYREINGEKCEPYEILTVDVEDEHQGAAMEELGRRRGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + R RLEYRIP+RGLIGFQ EF+T+TRGTGL+ HVF++YAP K D+ R
Sbjct: 427 QNMESDGNGRTRLEYRIPARGLIGFQGEFLTMTRGTGLMGHVFDDYAPV----KADMPGR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLIS +G+AVAY+LWKLQDRG++F D +YEGMIIGIHSRDNDL+VNPIK KQL
Sbjct: 483 RNGVLISAENGEAVAYALWKLQDRGKMFTVPGDKLYEGMIIGIHSRDNDLIVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TNIRSSG+DEA++LI+PI ++LE A+EFI+DDELVEITPK IR+RKR+L E+ERK+ +
Sbjct: 543 TNIRSSGTDEAVRLITPIALSLESAVEFIDDDELVEITPKTIRIRKRYLLEHERKRSI 600
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------EAGGITQHIG----AYNVVTNHGS 117
+ I+ HVDHGKT+++D + F+ ++G I + G A N N+
Sbjct: 8 IAIIAHVDHGKTTMVDKLLHQAGTFTGHQVVSERVMDSGDIEKERGITILAKNTALNYEG 67
Query: 118 --ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 68 THINVVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ D +
Sbjct: 128 NKVDRPGARTDWV 140
>gi|381401066|ref|ZP_09925984.1| GTP-binding protein [Kingella kingae PYKK081]
gi|380833991|gb|EIC13841.1| GTP-binding protein [Kingella kingae PYKK081]
Length = 605
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/598 (62%), Positives = 482/598 (80%), Gaps = 6/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI +KN +IEYNG
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVDERVMDSNDLEKERGITILAKNTAIEYNGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +AR WV+D TF+LFD L AT+EQLDFP++Y S L G+A + +M PLF+
Sbjct: 128 KIDKPSARASWVIDQTFELFDALGATDEQLDFPIVYASGLSGFARLEEDGTETDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P ++ PLQLQI L+Y +Y G++GIGR+L+G+I+ V +MN +++
Sbjct: 188 TILKHTPAPSGDAEAPLQLQISQLDYDNYTGRLGIGRVLNGKIRPGMQVAVMNH-EEQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+INQ+ FKGL+RV +EA +GDIV+I+GIEEI IG TICD P G+PML++DEPTL
Sbjct: 247 TGRINQLLGFKGLERVPQDEAEAGDIVIISGIEEIGIGVTICDKENPVGVPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL+ E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLNKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+F+ +NGE EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVFREINGEKCEPYENLTVDVPDENQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+T+TRGTGL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTMTRGTGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV++SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVMVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP +IRLRKR+L E ER+++
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPLSIRLRKRYLSEQERRRQF 599
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVDERVMDSNDLEKERGITILAKNTAIEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|333375539|ref|ZP_08467347.1| glutathione-disulfide reductase [Kingella kingae ATCC 23330]
gi|332970388|gb|EGK09380.1| glutathione-disulfide reductase [Kingella kingae ATCC 23330]
Length = 605
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/598 (62%), Positives = 481/598 (80%), Gaps = 6/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR+NQ ++ R+MDSN++EKERGITI +KN +IEYNG
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRENQQVDERVMDSNDLEKERGITILAKNTAIEYNGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +AR WV+D TF+LFD L AT+EQLDFP++Y S L G+A + +M PLF+
Sbjct: 128 KIDKPSARASWVIDQTFELFDALGATDEQLDFPIVYASGLSGFARLEEDGTETDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P ++ PLQLQI L+Y +Y G++GIGR+L+G+I+ V +MN +++
Sbjct: 188 TILKHTPAPSGDAEAPLQLQISQLDYDNYTGRLGIGRVLNGKIRPGMQVAVMNH-EEQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+INQ+ FKGL+RV +EA +GDIV+I+GIEEI IG TICD P G+PML++DEPTL
Sbjct: 247 TGRINQLLGFKGLERVPQDEAEAGDIVIISGIEEIGIGVTICDKENPVGVPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLTKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+F+ +NGE EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVFREINGEKCEPYENLTVDVPDENQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+T+TRGTGL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTMTRGTGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV++SQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVMVSQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA++L +PIK+TLE A+EFI+DDELVEITP +IRLRKR+L E ER+++
Sbjct: 542 TNVRASGTDEAVRLTTPIKLTLESAVEFIDDDELVEITPLSIRLRKRYLSEQERRRQF 599
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRENQQVDERVMDSNDLEKERGITILAKNTAIEYNG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|118594643|ref|ZP_01551990.1| GTP-binding protein TypA [Methylophilales bacterium HTCC2181]
gi|118440421|gb|EAV47048.1| GTP-binding protein TypA [Methylophilales bacterium HTCC2181]
Length = 602
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/596 (61%), Positives = 477/596 (80%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF ++Q +N R+MDSN+IEKERGITI +KN ++ Y G
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFAEHQQVNERVMDSNDIEKERGITILAKNTAVNYEGC 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INIIDTPGHADFGGEVER+L MVD V+LL+DAV+GPMPQTRFVT+KAL LG KPIV++N
Sbjct: 69 HINIIDTPGHADFGGEVERVLGMVDGVVLLVDAVDGPMPQTRFVTKKALALGLKPIVLIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLF L AT+EQLDFPV+Y SAL+GYA + +M PLFE
Sbjct: 129 KIDRPGARSDWVINHTFDLFANLGATDEQLDFPVVYASALNGYAKLKEEDESDSMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ +V + + PLQ QI +L+YS+Y G++GIGRI +G +KS V +M G D K
Sbjct: 189 TIMSHVESPEGDPTAPLQFQISALDYSTYTGRMGIGRIRNGVLKSGSPVAVMLG-DKKIG 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +IN++ +KGL++V V A +GDIV++TGIEE+ IG TI D KP GLP++ +DEPTL
Sbjct: 248 QGRINEVFSYKGLEKVSVPNAQAGDIVIVTGIEEVGIGVTIADMDKPIGLPVIPVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++FMVN SPLAG+EGKF+T+RQI+ RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 308 NMDFMVNTSPLAGKEGKFVTSRQIRERLTKELLVNVALRV-EDTDDADVFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYE++V +PRV++K ++G EPYENL VD+E+ QG +M++L R G+L
Sbjct: 367 TILLENMRREGYEIAVGKPRVVYKEIDGVKCEPYENLTVDVEDETQGTVMEELGRRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY+IP+RGLIGFQ EF+T+T+GTGL+SHVFEEY+ K ++ R
Sbjct: 427 TNMESDGLGRTRLEYKIPARGLIGFQGEFLTMTKGTGLMSHVFEEYSAV----KSEIPGR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLIS G+AVAY+LWKLQDRGR+F++H D +YEGM+IGIHSRDNDL+VNPIK KQL
Sbjct: 483 RNGVLISSEKGEAVAYALWKLQDRGRMFVSHGDKLYEGMVIGIHSRDNDLIVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA++L+ PI +TLEYA+EFI+DDELVEITP+++R+RKRFL E+ERK+
Sbjct: 543 TNVRSSGTDEAVRLVPPILMTLEYAVEFIDDDELVEITPQSLRIRKRFLVEHERKR 598
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F+E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFAEHQQVNERVMDSNDIEKERGITILAKNTAVNYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A DG MPQTR A G+ IV I
Sbjct: 68 CHINIIDTPGHADFGGEVERVLGMVDGVVLLVDAVDGPMPQTRFVTKKALALGLKPIVLI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|445495223|ref|ZP_21462267.1| translation initiation factor IF-2 [Janthinobacterium sp. HH01]
gi|444791384|gb|ELX12931.1| translation initiation factor IF-2 [Janthinobacterium sp. HH01]
Length = 955
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/539 (67%), Positives = 456/539 (84%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK LMKLGQM TINQVLDQETAMILVEEMGH A A++++DPE+ LL + ++
Sbjct: 390 MSVKASEVIKQLMKLGQMCTINQVLDQETAMILVEEMGHKAFAAEMDDPEA-LLADQGEH 448
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
ES+ RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G+ITF
Sbjct: 449 AHFESVPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVDTPRGTITF 508
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVPL+VAINKIDK
Sbjct: 509 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINKIDK 568
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N+DR+ Q+L++EQV+PEEYGG SPF+ +SAKTG GI+ LLE + LQAE+LELKAP+
Sbjct: 569 PGGNVDRVTQELVAEQVVPEEYGGESPFVPVSAKTGEGIDALLEQVLLQAEVLELKAPID 628
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G+++E RLDKGKGPVATVL+QSGTL+ D+++AG+S+GR+R+ML+ENGK I EAGP
Sbjct: 629 APARGLVVEGRLDKGKGPVATVLVQSGTLKRGDVILAGSSFGRVRAMLDENGKPINEAGP 688
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +GEE+ V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF+ +
Sbjct: 689 SIPVEIQGLTEVPQAGEEVMVMADERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMA 748
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +IIKTDV GS+E L SL+ LST +V++Q++H AVG I ESD+NLA+ASKA+
Sbjct: 749 EGEVKNLPLIIKTDVQGSQEALVGSLQKLSTSEVRVQIVHAAVGGITESDVNLAVASKAV 808
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ I EIKS ++ ++ EK+E ++G EIRQ
Sbjct: 809 IIGFNARADAQARKLAESNGVDIRYYNIIYDAIDEIKSALSGMLAPEKRETVIGQVEIRQ 868
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VILV+KV IAGC + +G+++R S +R+LRN ++WTGE+DSLKRFKD+ KEV+AG EC
Sbjct: 869 VILVSKVGAIAGCLVTDGVVKRSSSVRLLRNNIVVWTGEIDSLKRFKDDAKEVRAGLEC 927
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG F
Sbjct: 462 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVDTPRGTITF------------ 508
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 509 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINK 565
Query: 1047 IDR 1049
ID+
Sbjct: 566 IDK 568
>gi|452124684|ref|ZP_21937268.1| translation initiation factor IF-2 [Bordetella holmesii F627]
gi|452128078|ref|ZP_21940657.1| translation initiation factor IF-2 [Bordetella holmesii H558]
gi|451923914|gb|EMD74055.1| translation initiation factor IF-2 [Bordetella holmesii F627]
gi|451926293|gb|EMD76429.1| translation initiation factor IF-2 [Bordetella holmesii H558]
Length = 1041
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/550 (64%), Positives = 463/550 (84%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+VEE+GHVA A+KL+DPE+FL +E
Sbjct: 477 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVEELGHVAIAAKLDDPEAFL-DETPAA 535
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T+ GS+TF
Sbjct: 536 TEAEVSPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVQTDRGSVTF 595
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK +GVPL+VA+NK+DK
Sbjct: 596 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAAGVPLVVAVNKVDK 655
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+L++EQV+PEEYGG PF+S+SAKTG GI++LLEN+ LQAEILEL APV
Sbjct: 656 PDANPERVKQELVAEQVVPEEYGGDVPFVSVSAKTGAGIDELLENVLLQAEILELTAPVE 715
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 716 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKPIQAAGP 775
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL + +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 776 SIPVEIQGLTEVPAAGDELISLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNMG 835
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ K + L +I+KTDV GS+E L +L LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 836 EGK-QTLPLIVKTDVQGSQEALVNALTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 894
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRAD S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EKKE ++G E+R+
Sbjct: 895 VIGFNVRADQSAKKLAENNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKKEEIIGQVEVRE 954
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+GL+RRDS++R+LRN ++WTG+LDSL+RFKD+VKEVK+GF+C
Sbjct: 955 VYTISRIGTVAGCMVLDGLVRRDSQVRLLRNNVVVWTGQLDSLRRFKDDVKEVKSGFDCG 1014
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 1015 LTLRGSNDLQ 1024
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ +RG F
Sbjct: 549 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVQTDRGSVTF------------ 595
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 596 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAAGVPLVVAVNK 652
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
+D+ +A PE V + +++ E D P + SA G
Sbjct: 653 VDKPDANPERVKQEL--VAEQVVPEEYGGDVPFVSVSAKTG 691
>gi|253999446|ref|YP_003051509.1| GTP-binding protein TypA [Methylovorus glucosetrophus SIP3-4]
gi|313201468|ref|YP_004040126.1| GTP-binding protein typa [Methylovorus sp. MP688]
gi|253986125|gb|ACT50982.1| GTP-binding protein TypA [Methylovorus glucosetrophus SIP3-4]
gi|312440784|gb|ADQ84890.1| GTP-binding protein TypA [Methylovorus sp. MP688]
Length = 602
Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/596 (62%), Positives = 488/596 (81%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL+Q+GTF +Q ++ R+MDSN++EKERGITI +KN ++ Y GT
Sbjct: 9 AIIAHVDHGKTTMVDKLLQQAGTFASHQQVSERVMDSNDLEKERGITILAKNTAVNYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DAVEGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WV++ TFDLF L AT+EQLDFPV+Y SAL+G+A + K NM PLFE
Sbjct: 129 KVDRPGARTDWVINQTFDLFANLGATDEQLDFPVVYASALNGFATLDLKNESDNMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL +V + +SN PLQLQI +L+YSSY G++G+GRIL+GRIK Q VV+MNG D +
Sbjct: 189 TILSHVQPPQGDSNAPLQLQISALDYSSYTGRLGVGRILNGRIKPGQVVVVMNG-DTQTG 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F+GL+RV V EA +GDIV+I+GIEEI IG TI D KP GLP+L +DEPTL
Sbjct: 248 QGRINQVLGFRGLERVPVEEAEAGDIVIISGIEEIGIGVTIADREKPVGLPILGVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN+SPLAG EGKFIT+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 308 TMDFMVNSSPLAGTEGKFITSRQIRDRLTKELLVNVALRV-EDTADADVFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREG+E++V +PRV+++ ++G+ EPYE L VD+E+ QG +M++L R G+L
Sbjct: 367 TILLENMRREGFEIAVGKPRVVYREIDGQKCEPYEILTVDLEDDTQGAVMEELGRRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + R RLEY+IP+RGLIGFQ+EF+TLTRGTGL++H+F+EYAP K D+ R
Sbjct: 427 QNMESDGNGRTRLEYKIPARGLIGFQSEFLTLTRGTGLMAHIFDEYAPV----KADMPGR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLIS G+AVAY+LWKLQDRGR+F D +YEGM+IGIHSRDNDL+VNPIK KQL
Sbjct: 483 RNGVLISSEQGEAVAYALWKLQDRGRMFSVPGDRLYEGMVIGIHSRDNDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ +++TLE A+EFI+DDELVE+TPK+IR+RKR+L+E+ERK+
Sbjct: 543 TNVRASGTDEAVRLVPAVQLTLESAVEFIDDDELVELTPKSIRIRKRYLQEHERKR 598
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + F+ +++ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDKLLQQAGTFASHQQVSERVMDSNDLEKERGITILAKNTAVNYEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLGMVDGVVLLVDAVEGPMPQTRFVTKKALALGLRPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ D +
Sbjct: 128 NKVDRPGARTDWV 140
>gi|339481534|ref|YP_004693320.1| GTP-binding protein TypA [Nitrosomonas sp. Is79A3]
gi|338803679|gb|AEI99920.1| GTP-binding protein TypA [Nitrosomonas sp. Is79A3]
Length = 604
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/596 (62%), Positives = 482/596 (80%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL Q+GTF +Q I+ R+MDSN+IE+ERGITI +KNC+I++ G
Sbjct: 9 AIIAHVDHGKTTMVDKLLHQAGTFAAHQQISERVMDSNDIERERGITILAKNCAIDFEGI 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAVEGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WVVD TFDLFDKL A++EQLDFPV+Y SAL+G+A+ +M PLFE
Sbjct: 129 KIDRPGARADWVVDQTFDLFDKLGASDEQLDFPVVYASALNGFASLELNKPSTDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K+VP + N PLQLQI +L+YSS++G+IGIGRI G+++ Q+V+I+ G D P
Sbjct: 189 TIIKHVPAPEGNPEEPLQLQISALDYSSFVGRIGIGRIRRGKLRPGQEVMILLG-DKPPK 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAK+NQ+ F+GL+R+ + EAL+GDIVLI G+EE+ IG+T+ D P LP+ +DEPTL
Sbjct: 248 KAKVNQVLGFQGLERIQMKEALAGDIVLINGVEELSIGTTLADIDNPEALPIHMVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+RQ++ RL+ E+ N+ +R+ + DS + +SGRGELHL
Sbjct: 308 TMTFQVNTSPFAGQEGKFVTSRQLRERLEKELLTNVAMRLEETNETDS-FLISGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRP V+ + ++G EP+E L VD++E NQG +M+ L R GDL
Sbjct: 367 TILLENMRREGYELAVSRPHVVIREIDGVKCEPFEMLTVDVDEANQGAVMEALGARRGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+YRIP+RGLIGFQ+EF+T+TRGTGL+SHVF+E+AP + ++ R
Sbjct: 427 QDMVSDAKGRVRLDYRIPARGLIGFQSEFMTMTRGTGLMSHVFDEFAPM----RPEIPPR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLIS G+AVAY+LWKLQDRGR+F++ D +YEGM+IG+H+RDNDL+VNPIK KQL
Sbjct: 483 RNGVLISSEHGEAVAYALWKLQDRGRMFVSPGDRLYEGMVIGVHTRDNDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG+DEA+ L+ PI++TLE AIEFI DDELVEITPK IR+RKRFL E+ERK+
Sbjct: 543 TNIRASGTDEAVTLVPPIQLTLESAIEFIADDELVEITPKTIRIRKRFLLEHERKR 598
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + F+ I++ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDKLLHQAGTFAAHQQISERVMDSNDIERERGITILAKNCAIDFEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 IHINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVEGPMPQTRFVTKKALALGLRPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ D +
Sbjct: 128 NKIDRPGARADWV 140
>gi|395761101|ref|ZP_10441770.1| translation initiation factor IF-2 [Janthinobacterium lividum PAMC
25724]
Length = 952
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/564 (65%), Positives = 467/564 (82%), Gaps = 4/564 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK+LMKLGQM TINQVLDQETAMILVEEMGH A A++L+DPE+ LL + ++
Sbjct: 387 MSVKASEVIKHLMKLGQMCTINQVLDQETAMILVEEMGHKAFAAELDDPEA-LLADVGEH 445
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
ES RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 446 AHFESKPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVDTPRGMITF 505
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVPL+VAINK+DK
Sbjct: 506 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINKVDK 565
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N+DR+ Q+L++EQV+PEEYGG SPF+ +SAKTG GI++LLE + LQAE+LEL APV
Sbjct: 566 PGGNVDRVTQELVAEQVVPEEYGGESPFVPVSAKTGQGIDELLEQVLLQAEVLELMAPVD 625
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G+++E+RLDKG+GPVAT+L+QSGTL+ D+++AG+SYGR+R+ML+ENGK I EAGP
Sbjct: 626 APARGLVVEARLDKGRGPVATILVQSGTLKRGDVILAGSSYGRVRAMLDENGKAITEAGP 685
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +GEE+ V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF+ +
Sbjct: 686 SIPVEIQGLTEVPVAGEEVVVMADERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQMA 745
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +IIKTDV GS+E L SL+ LST +V++QV+H AVG I ESD+NLA+ASKA+
Sbjct: 746 EGEVKNLPLIIKTDVQGSQEALVGSLQKLSTSEVRVQVVHAAVGGITESDVNLAVASKAV 805
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ I EI+S ++ ++ EK+E ++G EIRQ
Sbjct: 806 IIGFNARADAQARKLAESNGVDIRYYNIIYDAIDEIRSALSGMLAPEKRETVIGQVEIRQ 865
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VILV+KV IAGC + +G+++R S +R+LRN ++W+GE+DSLKRFKD+ KEV+AG EC
Sbjct: 866 VILVSKVGAIAGCLVTDGVVKRASSVRLLRNNIVVWSGEIDSLKRFKDDAKEVRAGLECG 925
Query: 541 RLSRIENQIQ-RDISEIIAFDIQN 563
R N IQ D E+ F++Q
Sbjct: 926 LSLRNYNDIQVGDTLEV--FEVQE 947
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 459 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVDTPRGMITF------------ 505
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 506 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINK 562
Query: 1047 IDR 1049
+D+
Sbjct: 563 VDK 565
>gi|311104988|ref|YP_003977841.1| translation initiation factor IF-2 [Achromobacter xylosoxidans A8]
gi|310759677|gb|ADP15126.1| translation initiation factor IF-2 [Achromobacter xylosoxidans A8]
Length = 1015
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/550 (65%), Positives = 462/550 (84%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+VEE+GHVA A+KL+DPE+FL +E
Sbjct: 451 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVEELGHVAIAAKLDDPEAFL-DETATV 509
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE + RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 510 SEAEQMSRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVQTERGMVTF 569
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LV AADDGVMPQTREAI HAK +GVP++VA+ KIDK
Sbjct: 570 LDTPGHEAFTAMRARGAKATDIVILVCAADDGVMPQTREAIHHAKAAGVPMVVAMTKIDK 629
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N DR+KQ+L++E+V+PEEYGG PF+S+SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 630 PSANPDRVKQELVAEEVVPEEYGGDVPFVSVSAKTGEGIDDLLENLLLQAEVLELKAPVD 689
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I EAGP
Sbjct: 690 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKPIQEAGP 749
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 750 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 809
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L +SL LSTD+V++QV+H AVG I+ESDINLAIAS A+
Sbjct: 810 -EGTQTLALIVKTDVQGSQEALVQSLTKLSTDEVRVQVVHAAVGGISESDINLAIASNAV 868
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+AS +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EKKE ++GL EIR+
Sbjct: 869 VIGFNVRAEASAKKLAENNGIDVRYYNIIYDAVDEVKAAMSGMLAPEKKEEVIGLVEIRE 928
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ IAGC +L+GL+RRDS++R+LRN + WTG+LDSL+RFKD+VKEVK+GF+C
Sbjct: 929 VYSISRIGNIAGCMVLDGLVRRDSQVRLLRNNVVHWTGQLDSLRRFKDDVKEVKSGFDCG 988
Query: 541 RLSRIENQIQ 550
R N IQ
Sbjct: 989 LTLRGNNDIQ 998
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ ERG+ F
Sbjct: 523 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVQTERGMVTF------------ 569
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQTR A G +V + K
Sbjct: 570 ---LDTPGHEAFTAMRARGAKATDIVILVCAADDGVMPQTREAIHHAKAAGVPMVVAMTK 626
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A P+ V + +++ E D P + SA G
Sbjct: 627 IDKPSANPDRVKQEL--VAEEVVPEEYGGDVPFVSVSAKTG 665
>gi|239815729|ref|YP_002944639.1| GTP-binding protein TypA [Variovorax paradoxus S110]
gi|239802306|gb|ACS19373.1| GTP-binding protein TypA [Variovorax paradoxus S110]
Length = 611
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/600 (61%), Positives = 473/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWEGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPI+VVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 130 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP K + + PLQLQI +L++S+++G+IG+GRI G +K + DV++M GPD
Sbjct: 190 ALFNTILKHVPAQKGDPDAPLQLQISALDFSTFVGRIGVGRISQGTLKPMMDVLVMEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDRV EA G+IVLI GI +I IG T+ DP+ P+ LPML +D
Sbjct: 250 GKTVKGRVNQVLTFQGLDRVQATEAGPGEIVLINGIADIGIGVTVTDPANPSPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + ++ I+EV GRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVNETD-EEGIFEVMGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYE++VS+PRV+F+T+NGE +EP E + DIEE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGYEMAVSKPRVVFRTVNGEKHEPIELVTADIEEQHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K +
Sbjct: 429 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGE 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IGSRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI++TLEY +EFI DDELVEITPK++RLRKRFLKENERK+
Sbjct: 545 TKQLTNFRVSGKEDAIKITPPIELTLEYGVEFIEDDELVEITPKSVRLRKRFLKENERKR 604
Score = 71.6 bits (174), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWEG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVV 128
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 129 NKVDKPGANPDKV 141
>gi|187478884|ref|YP_786908.1| translation initiation factor IF-2 [Bordetella avium 197N]
gi|123766041|sp|Q2KXY7.1|IF2_BORA1 RecName: Full=Translation initiation factor IF-2
gi|115423470|emb|CAJ50004.1| translation initiation factor IF-2 [Bordetella avium 197N]
Length = 1034
Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/550 (64%), Positives = 460/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+VEE+GHVA A+KL+DPE+FL +E
Sbjct: 470 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVEELGHVAIAAKLDDPEAFL-DETPGV 528
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T+ GS+TF
Sbjct: 529 SEAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETDRGSVTF 588
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK +GVPL+VA+NKIDK
Sbjct: 589 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAAGVPLVVAVNKIDK 648
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++EQV+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILEL APV
Sbjct: 649 PEANPDRVKQELVAEQVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELTAPVE 708
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK + AGP
Sbjct: 709 AAAKGIVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKQVQSAGP 768
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL + +E++AREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 769 SIPVEIQGLTEVPAAGDELISLSDERRAREIALFRQGKFRDVKLARQQAAKLESMFDNMG 828
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L +L LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 829 -EGTQTLPLIVKTDVQGSQEALVAALTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 887
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRAD S +KLA N I++RY+NIIY+ + E+K+ ++ ++ EK+E ++GL E+R+
Sbjct: 888 VIGFNVRADQSAKKLADNNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKREEIIGLVEVRE 947
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+GL+RRDS++R+LRN + WTG+LDSL+RFKD+VKEVK+GF+C
Sbjct: 948 VYTISRIGTVAGCMVLDGLVRRDSQVRLLRNNVVTWTGQLDSLRRFKDDVKEVKSGFDCG 1007
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 1008 LTLRGNNDLQ 1017
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG F
Sbjct: 542 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETDRGSVTF------------ 588
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 589 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAAGVPLVVAVNK 645
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A P+ V + +++ E D P + SA G
Sbjct: 646 IDKPEANPDRVKQEL--VAEQVVPEEYGGDVPFVPVSAKTG 684
>gi|332528897|ref|ZP_08404867.1| GTP-binding protein TypA [Hylemonella gracilis ATCC 19624]
gi|332041654|gb|EGI78010.1| GTP-binding protein TypA [Hylemonella gracilis ATCC 19624]
Length = 607
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/600 (60%), Positives = 473/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVSWKGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD+VLLLIDA EGPMPQTRFVT+KAL LG +PIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDSVLLLIDAQEGPMPQTRFVTKKALALGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 129 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLTEGTPGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ ILK+VP + + PLQLQI +L++S+++G+IG+GR+ G I+ + DVV+M GPD
Sbjct: 189 ALFDTILKHVPANSGDPTAPLQLQISALDFSTFVGRIGVGRVSQGTIRPMMDVVVMEGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDR+ EA GDIVLI GIE+I IG T+ DP P LPML +D
Sbjct: 249 GKAVKGRVNQVLTFQGLDRMQTPEAGPGDIVLINGIEDIGIGVTVTDPINPAPLPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + ++ ++EV GRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVNETD-EEGVFEVMGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYE++VS+PRV+F+T+NGE +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYEMAVSKPRVVFRTINGEKHEPIELVTADIEEQHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K D
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFMNLTRGSGLISNIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++A+++ PI++TLEY +EFI DDELVEITPK+IRLRKR+LKE+ERK+
Sbjct: 544 TKQLTNFRVSGKEDAVKITPPIELTLEYGVEFIEDDELVEITPKSIRLRKRYLKEHERKR 603
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVSWKG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L++ A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDSVLLLIDAQEGPMPQTRFVTKKALALGLRPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|329119201|ref|ZP_08247889.1| GTP-binding protein TypA/BipA, partial [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464676|gb|EGF10973.1| GTP-binding protein TypA/BipA [Neisseria bacilliformis ATCC BAA-1200]
Length = 579
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/578 (62%), Positives = 462/578 (79%), Gaps = 6/578 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR NQ ++ R+MDSN++EKERGITI +KN +I+Y G
Sbjct: 8 AIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEGY 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 68 HINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ AR WV+D TFDLFD L ATEEQLDFP++Y S L G+A N + +M PLF+
Sbjct: 128 KIDKPTARASWVIDQTFDLFDNLGATEEQLDFPIVYASGLSGFAKLNEEDESNDMRPLFD 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
ILK+ P +++ LQLQI L+Y +Y G++GIGRIL+GRIK Q V +MN + +
Sbjct: 188 TILKHTPAPSGSADETLQLQISQLDYDNYTGRLGIGRILNGRIKPGQVVAVMN-HEQQVA 246
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ FKGL+RV + EA +GDIV+I+GIE+I IG TI D P GLPML++DEPTL
Sbjct: 247 QGRINQLLGFKGLERVPLEEAEAGDIVIISGIEDIGIGVTISDKENPKGLPMLSVDEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV ++ D ++ VSGRGELHL
Sbjct: 307 TMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLTNVALRV-EDTADADVFRVSGRGELHL 365
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+V +PRV+F+ ++G+ EPYENL VD+ + NQG +M++L R G+L
Sbjct: 366 TILLENMRREGYELAVGKPRVVFREIDGQKCEPYENLTVDVPDDNQGAVMEELGRRRGEL 425
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEY IP+RGLIGFQ EF+TLTRG GL+SHVF++YAP K D+ R
Sbjct: 426 TNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTRGVGLMSHVFDDYAPV----KPDMPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLISQ G+AVAY+LW L+DRGR+F++ ND +YEGMIIGIHSRDNDL+VNP+K K+L
Sbjct: 482 HNGVLISQEQGEAVAYALWNLEDRGRMFVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEIT 1503
TNIR+SG+DEA++L +PIK+TLE A+EFI+DDELVEIT
Sbjct: 542 TNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDELVEIT 579
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 7 IAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDSNDLEKERGITILAKNTAIDYEG 66
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV I
Sbjct: 67 YHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVI 126
Query: 176 NKIDK 180
NKIDK
Sbjct: 127 NKIDK 131
>gi|237746612|ref|ZP_04577092.1| translation initiation factor IF-2 [Oxalobacter formigenes HOxBLS]
gi|229377963|gb|EEO28054.1| translation initiation factor IF-2 [Oxalobacter formigenes HOxBLS]
Length = 979
Score = 769 bits (1986), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/539 (67%), Positives = 450/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK LMKLGQMVTINQVLDQETAMILVEEMGH A A+++ D ES L E +N
Sbjct: 414 MAVKASEVIKQLMKLGQMVTINQVLDQETAMILVEEMGHRAFAARIQDVES-QLEEIGRN 472
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+T + EAGGITQHIGAY+V T G +TF
Sbjct: 473 DNAELLPRAPVVTVMGHVDHGKTSLLDYIRRTKIASGEAGGITQHIGAYHVKTERGIVTF 532
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINK+DK
Sbjct: 533 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKVDK 592
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N++R+ Q+L++EQV+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAEILELKAPV
Sbjct: 593 QGANINRVTQELVAEQVMPEEYGGDSPFVPVSAKTGQGIDSLLENVLLQAEILELKAPVE 652
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE+RLDKG+GPVATVL+QSGTL D+V+AG +GR+R+ML+E GK I EAGP
Sbjct: 653 AMAKGIVIEARLDKGRGPVATVLVQSGTLHRGDVVLAGQEFGRVRAMLDETGKAISEAGP 712
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT VP +GEE+ V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF+ I
Sbjct: 713 SIPVEIQGLTGVPSAGEEIVVLNDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFDQIA 772
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +I+KTDV GS+E L SL LS D+V++Q++H AVG I E+D+NLA+ASKA+
Sbjct: 773 EGEVKTLPLIVKTDVQGSQEALAASLLKLSNDEVRVQIVHAAVGGITETDVNLALASKAV 832
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA R LA+ N ++IRY+NIIY+ I E+K+ ++ ++ EK+E+ LGL EIRQ
Sbjct: 833 IIGFNTRADAQARHLAEANGVDIRYYNIIYDAIDEVKAAMSGMLAPEKREHALGLVEIRQ 892
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI+V++V IAGC++ EGL+RR S + +LR+ +IW+GE+DSLKRFKD+VKEVKAGFEC
Sbjct: 893 VIMVSRVGAIAGCFVTEGLVRRGSPVHLLRDNVVIWSGEIDSLKRFKDDVKEVKAGFEC 951
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ ERGI F
Sbjct: 486 VMGHVDHGKTSLLDYIRRTKIASGEAGGITQHI-GAYHVKTERGIVTF------------ 532
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 533 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 589
Query: 1047 IDRSNA 1052
+D+ A
Sbjct: 590 VDKQGA 595
>gi|163857445|ref|YP_001631743.1| translation initiation factor IF-2 [Bordetella petrii DSM 12804]
gi|226713792|sp|A9ITX6.1|IF2_BORPD RecName: Full=Translation initiation factor IF-2
gi|163261173|emb|CAP43475.1| translation initiation factor IF-2 [Bordetella petrii]
Length = 991
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/550 (65%), Positives = 459/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+VEE+GHVA A+KL+DPE+FL +E
Sbjct: 427 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVEELGHVAIAAKLDDPEAFL-DETPVA 485
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 486 SEAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETARGVVTF 545
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK GVPL+VA+NKIDK
Sbjct: 546 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNKIDK 605
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILEL APV
Sbjct: 606 PEANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELTAPVE 665
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+M++ENGK I EAGP
Sbjct: 666 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMVDENGKQIQEAGP 725
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL + +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 726 SIPVEIQGLTEVPAAGDELIALADERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 785
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L SL LSTD+V++QV+H AVG I+ESDINLAIAS A+
Sbjct: 786 -EGTQTLPLIVKTDVQGSQEALVASLTKLSTDEVRVQVVHAAVGGISESDINLAIASNAV 844
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EKKE ++GL E+R+
Sbjct: 845 VIGFNVRAEQSAKKLAESNGIDVRYYNIIYDAVDEVKAAMSGMLAPEKKEEVIGLVEVRE 904
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+GL+RRDS+IR+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 905 VYSISRIGNVAGCMVLDGLVRRDSQIRLLRNNVVHWTGHLDSLRRFKDDVKEVKSGFDCG 964
Query: 541 RLSRIENQIQ 550
R N IQ
Sbjct: 965 LTLRGSNDIQ 974
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 499 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETARGVVTF------------ 545
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 546 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNK 602
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P + SA G
Sbjct: 603 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 641
>gi|71907627|ref|YP_285214.1| GTP-binding protein TypA [Dechloromonas aromatica RCB]
gi|71847248|gb|AAZ46744.1| Small GTP-binding protein domain:GTP-binding protein TypA
[Dechloromonas aromatica RCB]
Length = 613
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/605 (60%), Positives = 477/605 (78%), Gaps = 11/605 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +Q + +MDSN++EKERGITI SKN ++EY G
Sbjct: 10 AIIAHVDHGKTTLVDQLLRQSGTFAAHQQLVECVMDSNDLEKERGITILSKNTAVEYQGV 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+DA EGPMPQTRFVT+KAL LG +PIV+VN
Sbjct: 70 HINIVDTPGHADFGGEVERVLGMVDGVVLLVDAAEGPMPQTRFVTKKALALGLRPIVLVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR A P+ V+ TFDLFDKL AT+EQLDFP++Y S L+G+A + NMIPLF+
Sbjct: 130 KVDRDGADPDQAVNLTFDLFDKLGATDEQLDFPIVYASGLNGWAAMELDQPRENMIPLFD 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK-- 1163
IL++VP + PLQLQI +L+YSSY+G+IG+G+I G++K+ Q+V++M G +++
Sbjct: 190 TILRHVPAPDTDIEAPLQLQITALDYSSYVGRIGVGKINRGKVKTGQNVLVMFGTEEEAA 249
Query: 1164 -----PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPML 1218
P KAKI Q+ +KGL++V + E +GDIV ITGIE++ +G T+ DP +P LP+L
Sbjct: 250 EHERTPIKAKIGQVFGYKGLNKVELEEGHAGDIVQITGIEDLVLGCTVTDPEQPESLPLL 309
Query: 1219 NIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVS 1278
IDEPTL++ FMVN SPLAG EGKF+T+RQI++RL E+ N+ LRV + D +++VS
Sbjct: 310 KIDEPTLSMQFMVNTSPLAGTEGKFVTSRQIRDRLHKELLTNMALRVHDTGNGD-VFDVS 368
Query: 1279 GRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKL 1338
GRGELHL IL+ENMRREGYEL+V RPRV+ KT+NG EPYE L VD+EE QG +M+ L
Sbjct: 369 GRGELHLGILLENMRREGYELAVGRPRVVKKTINGVECEPYELLTVDVEEDTQGGVMESL 428
Query: 1339 NYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKS 1398
R GDL ++ + + RVR+EYRIP+RGLIGFQ EF+ LTRG GL+SHVF+EYAP + S
Sbjct: 429 GQRKGDLTDMVPDGRGRVRIEYRIPARGLIGFQGEFMNLTRGNGLMSHVFDEYAPVKDGS 488
Query: 1399 KYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVN 1458
+ +RRNGVLISQ +G+AVAY+LWKLQDRGR+F+ D +YEGMIIGIHSR+NDL+VN
Sbjct: 489 ---VAERRNGVLISQDNGEAVAYALWKLQDRGRMFVVPGDKLYEGMIIGIHSRENDLVVN 545
Query: 1459 PIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENE 1518
PIK KQLTN+R+SG+DEA++L+ ++++LE A+EFI +DELVE+TPK+IRLRKR+L E E
Sbjct: 546 PIKGKQLTNVRASGTDEAVRLVPAVQLSLEAAVEFIEEDELVELTPKSIRLRKRYLTEIE 605
Query: 1519 RKKKL 1523
RK+ +
Sbjct: 606 RKRAV 610
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F+ + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDQLLRQSGTFAAHQQLVECVMDSNDLEKERGITILSKNTAVEYQG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQTR A G+ IV +
Sbjct: 69 VHINIVDTPGHADFGGEVERVLGMVDGVVLLVDAAEGPMPQTRFVTKKALALGLRPIVLV 128
Query: 176 NKIDKLDINLDR 187
NK+D+ + D+
Sbjct: 129 NKVDRDGADPDQ 140
>gi|255020511|ref|ZP_05292575.1| GTP-binding protein TypA/BipA [Acidithiobacillus caldus ATCC 51756]
gi|254970031|gb|EET27529.1| GTP-binding protein TypA/BipA [Acidithiobacillus caldus ATCC 51756]
Length = 605
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/596 (61%), Positives = 461/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +Q + R+MDSN +EKERGITI +KN ++++ T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNALEKERGITIMAKNTAVQWGDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFG EVER+L MVD VLLL+DAVEGPMPQTRFVTRKAL+LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V+ AT DLFD+L ATEEQLDFPVIY S L GYA + R+G+M PLFE
Sbjct: 129 KIDRPGARPDYVISATLDLFDRLGATEEQLDFPVIYASGLQGYAGHDDSIREGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL+ V + + PLQ+QI L+YSSY+G+I +GRI G ++ QDVV+++G + K
Sbjct: 189 MILEKVAPPAGDPSAPLQMQIADLDYSSYVGRIAVGRIRQGTMRPGQDVVMIHGSEQKQT 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+I Q+ F GL RV EA++GDIV +TGI+E IG+TI DP P LP IDEPTL
Sbjct: 249 KARILQVLGFDGLKRVPWEEAVAGDIVAVTGIDEPSIGATIADPQHPKALPWKPIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AGREGKF+T+RQ++ RL E+ N+ LRV + D ++ VSGRGELHL
Sbjct: 309 NMTFQVNTSPFAGREGKFVTSRQLRERLYKELLTNVALRVEDTDNAD-VFLVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
T+L+ENMRREGYEL+VSRPRVI + ++G EPYE L +D+EE +QG IM++L R G+L
Sbjct: 368 TVLVENMRREGYELAVSRPRVIQRQVDGVWEEPYEALTIDVEEEHQGAIMERLGTRRGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + RVRLEYRIP+RGLIGF EF+T T GTG+ISH+F+ Y P K + R
Sbjct: 428 QDMQPDGRGRVRLEYRIPARGLIGFHTEFMTATSGTGVISHIFDGYGPV----KGAIPAR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS G+AV Y+L+ LQDRGRLFI D VYEGM+IGIHSRDNDL+VNP+KEK+L
Sbjct: 484 INGVLISAEEGEAVGYALFNLQDRGRLFIGPGDKVYEGMVIGIHSRDNDLVVNPLKEKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSDE I L PI+++LE A+EFI DDELVE+TP++IR+RKR+L ENERKK
Sbjct: 544 TNMRASGSDENILLTPPIRMSLEAAVEFIADDELVEVTPQSIRIRKRYLSENERKK 599
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F+ + + + N + IT +
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNALEKERGITIMAKNTAVQWGD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F A R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|260221434|emb|CBA29993.1| GTP-binding protein typA/bipA [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 607
Score = 768 bits (1984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/600 (61%), Positives = 472/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVSWEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD+VLLLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDSVLLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 129 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP + + PLQLQI +L++SS++G+IG+GRI G IK +QDVV+M GPD
Sbjct: 189 ALFNTILKHVPPNSGDPTAPLQLQISALDFSSFVGRIGVGRISQGTIKPMQDVVVMEGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDR+ A GDIVLI GIE+I IG T+ DP+ P LPML +D
Sbjct: 249 GKAVKGRVNQVLTFQGLDRMQSPLAGPGDIVLINGIEDIGIGVTVTDPANPQPLPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + ++ ++EV GRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVNETD-EEGVFEVLGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYE++VS+PRV+FK +NGE +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYEMAVSKPRVMFKDINGEKHEPIELVTADIEEQHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K D
Sbjct: 428 KGELINMEPDGRGRVRLEYRIPARGLIGFSNEFLNLTRGSGLISNIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIH+RDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHNRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI++TLEY +EFI DDELVEITPK++RLRKRFLKE+ERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIELTLEYGVEFIEDDELVEITPKSVRLRKRFLKEHERKR 603
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVSWEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L++ A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDSVLLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|121594896|ref|YP_986792.1| GTP-binding protein TypA [Acidovorax sp. JS42]
gi|120606976|gb|ABM42716.1| GTP-binding protein TypA [Acidovorax sp. JS42]
Length = 609
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/604 (61%), Positives = 470/604 (77%), Gaps = 17/604 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MDSN IE+ERGITI +KNC++ +NGT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDSNAIERERGITILAKNCAVSWNGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN------ 1099
K+D+ ARP++VV+A FDLFDKL AT+EQLDFPV+Y S ++G+ S QGN
Sbjct: 129 KVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVYASGINGW----SSLEQGNPGEQWG 184
Query: 1100 --MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIM 1157
M LFE ILK+VP K ++ PLQ+Q+ +L+YS+++G+IG+GRI G +K+ QDV++M
Sbjct: 185 PDMSALFETILKHVPSVKGDATAPLQMQVSALDYSTFVGRIGVGRITQGTLKAGQDVLVM 244
Query: 1158 NGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPM 1217
GPD K ++NQI F+GLDRV V+EA +IVLI GIE + IG T+ DP+ P LPM
Sbjct: 245 AGPDGASYKGRVNQIHQFQGLDRVQVSEAGPSEIVLINGIENVGIGETLTDPANPQPLPM 304
Query: 1218 LNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEV 1277
L IDEPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + +D I+EV
Sbjct: 305 LKIDEPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELRSNVALRVKETD-EDGIFEV 363
Query: 1278 SGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQK 1337
SGRGELHLTIL+E MRREGYEL+VS+PRV+++ ++GE EP E + DIEE +QG +MQ
Sbjct: 364 SGRGELHLTILLEEMRREGYELAVSKPRVVYRDIDGERCEPIELVTADIEEGHQGGVMQA 423
Query: 1338 LNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNK 1397
L R G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P
Sbjct: 424 LGERKGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH--- 480
Query: 1398 SKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLV 1457
K D+G R+NGVLIS G+ Y+L KL DRGR+F+ D VYEGMI+G+H+RDNDL+V
Sbjct: 481 -KGDIGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKAGDPVYEGMIVGVHNRDNDLVV 539
Query: 1458 NPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKEN 1517
N + KQLTN R SG ++AI++ PI +TLEY +EFI DDELVEITPK+IRLRKR LKE+
Sbjct: 540 NATRTKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSIRLRKRHLKEH 599
Query: 1518 ERKK 1521
ERK+
Sbjct: 600 ERKR 603
Score = 73.6 bits (179), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 122/284 (42%), Gaps = 47/284 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDSNAIERERGITILAKNCAVSWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI---------KQDLISEQV-IPEEYG-GASPFISI-----SAKTGVGI 219
NK+DK D + K EQ+ P Y G + + S+ + G +
Sbjct: 128 NKVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEQGNPGEQWGPDM 187
Query: 220 NKLLENISLQAEILELKAPVTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCS-DIVV 276
+ L E I + +K T P + + S LD G + I GTL+ D++V
Sbjct: 188 SALFETI--LKHVPSVKGDATAPLQMQV--SALDYSTFVGRIGVGRITQGTLKAGQDVLV 243
Query: 277 A----GASY-GRIRSMLNENGKN---ILEAGPSIPVEIQGLTKV 312
GASY GR+ + G + + EAGPS V I G+ V
Sbjct: 244 MAGPDGASYKGRVNQIHQFQGLDRVQVSEAGPSEIVLINGIENV 287
>gi|222110453|ref|YP_002552717.1| GTP-binding protein typa [Acidovorax ebreus TPSY]
gi|221729897|gb|ACM32717.1| GTP-binding protein TypA [Acidovorax ebreus TPSY]
Length = 609
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/604 (61%), Positives = 469/604 (77%), Gaps = 17/604 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MDSN IE+ERGITI +KNC++ +NGT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDSNAIERERGITILAKNCAVSWNGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN------ 1099
K+D+ ARP++VV+A FDLFDKL AT+EQLDFPV+Y S ++G+ S QGN
Sbjct: 129 KVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVYASGINGW----SALEQGNPGEQWG 184
Query: 1100 --MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIM 1157
M LFE ILK+VP K ++ PLQ+Q+ +L+YS+++G+IG+GRI G +K+ QDV++M
Sbjct: 185 PDMSALFETILKHVPSVKGDATAPLQMQVSALDYSTFVGRIGVGRITQGTLKAGQDVLVM 244
Query: 1158 NGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPM 1217
GPD K ++NQI F+GLDRV V EA +IVLI GIE + IG T+ DP+ P LPM
Sbjct: 245 AGPDGASYKGRVNQIHQFQGLDRVQVTEAGPSEIVLINGIENVGIGETLTDPANPQPLPM 304
Query: 1218 LNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEV 1277
L IDEPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + +D I+EV
Sbjct: 305 LKIDEPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELRSNVALRVKETD-EDGIFEV 363
Query: 1278 SGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQK 1337
SGRGELHLTIL+E MRREGYEL+VS+PRV+++ ++GE EP E + DIEE +QG +MQ
Sbjct: 364 SGRGELHLTILLEEMRREGYELAVSKPRVVYRDIDGERCEPIELVTADIEEGHQGGVMQA 423
Query: 1338 LNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNK 1397
L R G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P
Sbjct: 424 LGERKGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH--- 480
Query: 1398 SKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLV 1457
K D+G R+NGVLIS G+ Y+L KL DRGR+F+ D VYEGMI+G+H+RDNDL+V
Sbjct: 481 -KGDIGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKAGDPVYEGMIVGVHNRDNDLVV 539
Query: 1458 NPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKEN 1517
N + KQLTN R SG ++AI++ PI +TLEY +EFI DDELVEITPK+IRLRKR LKE+
Sbjct: 540 NATRTKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSIRLRKRHLKEH 599
Query: 1518 ERKK 1521
ERK+
Sbjct: 600 ERKR 603
Score = 73.9 bits (180), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 121/286 (42%), Gaps = 51/286 (17%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDSNAIERERGITILAKNCAVSWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI---------KQDLISEQV-IPEEYGGASPFISISA--------KTGV 217
NK+DK D + K EQ+ P Y AS SA + G
Sbjct: 128 NKVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVY--ASGINGWSALEQGNPGEQWGP 185
Query: 218 GINKLLENISLQAEILELKAPVTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCS-DI 274
++ L E I + +K T P + + S LD G + I GTL+ D+
Sbjct: 186 DMSALFETI--LKHVPSVKGDATAPLQMQV--SALDYSTFVGRIGVGRITQGTLKAGQDV 241
Query: 275 VVA----GASY-GRIRSMLNENGKN---ILEAGPSIPVEIQGLTKV 312
+V GASY GR+ + G + + EAGPS V I G+ V
Sbjct: 242 LVMAGPDGASYKGRVNQIHQFQGLDRVQVTEAGPSEIVLINGIENV 287
>gi|340781041|ref|YP_004747648.1| GTP-binding protein TypA/BipA [Acidithiobacillus caldus SM-1]
gi|340555194|gb|AEK56948.1| GTP-binding protein TypA/BipA [Acidithiobacillus caldus SM-1]
Length = 605
Score = 766 bits (1978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/596 (61%), Positives = 460/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +Q + R+MDSN +EKERGITI +KN ++++ T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNALEKERGITIMAKNTAVQWGDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFG EVER+L MVD VLLL+DAVEGPMPQTRFVTRKAL+LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V+ AT DLFD+L ATEEQLDFPVIY S L GYA + R G+M PLFE
Sbjct: 129 KIDRPGARPDYVISATLDLFDRLGATEEQLDFPVIYASGLQGYAGHDDSIRGGDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL+ V + + PLQ+QI L+YSSY+G+I +GRI G ++ QDVV+++G + K
Sbjct: 189 MILEKVAPPAGDPSAPLQMQIADLDYSSYVGRIAVGRIRQGTMRPGQDVVMIHGSEQKQT 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+I Q+ F GL RV EA++GDIV +TGI+E IG+TI DP P LP IDEPTL
Sbjct: 249 KARILQVLGFDGLKRVPWEEAVAGDIVAVTGIDEPSIGATIADPQHPKALPWKPIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AGREGKF+T+RQ++ RL E+ N+ LRV + D ++ VSGRGELHL
Sbjct: 309 NMTFQVNTSPFAGREGKFVTSRQLRERLYKELLTNVALRVEDTDNAD-VFLVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
T+L+ENMRREGYEL+VSRPRVI + ++G EPYE L +D+EE +QG +M++L R G+L
Sbjct: 368 TVLVENMRREGYELAVSRPRVIQRQVDGVWEEPYEALTIDVEEEHQGAVMERLGTRRGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + + RVRLEYRIP+RGLIGF EF+T T GTG+ISH+F+ Y P K + R
Sbjct: 428 QDMQPDGRGRVRLEYRIPARGLIGFHTEFMTATSGTGVISHIFDGYGPV----KGAIPAR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS G+AV Y+L+ LQDRGRLFI D VYEGM+IGIHSRDNDL+VNP+KEK+L
Sbjct: 484 INGVLISAEEGEAVGYALFNLQDRGRLFIGPGDKVYEGMVIGIHSRDNDLVVNPLKEKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSDE I L PI+++LE A+EFI DDELVE+TP++IR+RKR+L ENERKK
Sbjct: 544 TNMRASGSDENILLTPPIRMSLEAAVEFIADDELVEVTPQSIRIRKRYLSENERKK 599
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F+ + + + N + IT +
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNALEKERGITIMAKNTAVQWGD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F A R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|359798518|ref|ZP_09301089.1| translation initiation factor IF-2 [Achromobacter arsenitoxydans SY8]
gi|359363340|gb|EHK65066.1| translation initiation factor IF-2 [Achromobacter arsenitoxydans SY8]
Length = 1018
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/550 (64%), Positives = 459/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK+LMKLGQMVTINQVLDQETAMI+VEE+GH+A A+KL+DPE+FL +E
Sbjct: 454 MSVKAAEVIKHLMKLGQMVTINQVLDQETAMIVVEELGHIAIAAKLDDPEAFL-DETATQ 512
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 513 SEAEQLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVRTERGMVTF 572
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK +GVP++VA+ KIDK
Sbjct: 573 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAAGVPMVVAVTKIDK 632
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +R+KQ+L++EQV+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAE+LELKAP
Sbjct: 633 PSANPERVKQELVAEQVVPEEYGGDVPFVGVSAKTGEGIDDLLENVLLQAEVLELKAPEE 692
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 693 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKPIQSAGP 752
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL + +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 753 SIPVEIQGLTEVPAAGDELMALSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 812
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L +SL LSTD+V++QV+H AVG I+E+DINLAIAS A+
Sbjct: 813 -EGTQTLTLIVKTDVQGSQEALVQSLVKLSTDEVRVQVVHAAVGGISETDINLAIASNAV 871
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+AS +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EKKE ++GL EIR+
Sbjct: 872 VIGFNVRAEASAKKLAENNGIDVRYYNIIYDAVDEVKAAMSGMLAPEKKEEIIGLVEIRE 931
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ IAGC +L+G++RRDS++R+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 932 VYSISRLGNIAGCMVLDGIVRRDSQVRLLRNNVVHWTGHLDSLRRFKDDVKEVKSGFDCG 991
Query: 541 RLSRIENQIQ 550
R N IQ
Sbjct: 992 LTLRGNNDIQ 1001
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + + ERG+ F
Sbjct: 526 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVRTERGMVTF------------ 572
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V V K
Sbjct: 573 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAAGVPMVVAVTK 629
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A PE V + +++ E D P + SA G
Sbjct: 630 IDKPSANPERVKQEL--VAEQVVPEEYGGDVPFVGVSAKTG 668
>gi|351728292|ref|ZP_08945983.1| GTP-binding protein TypA [Acidovorax radicis N35]
Length = 607
Score = 765 bits (1976), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/600 (61%), Positives = 471/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF ++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWKGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD+V+LLIDA EGPMPQTRFVT+KAL LG +PI+VVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 129 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ IL +VP + + PLQLQI +L++S+++G+IG+GRI G IK QDV++M GPD
Sbjct: 189 ALFDTILSHVPPNTGDPAAPLQLQISALDFSTFVGRIGVGRISQGTIKPGQDVLVMEGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDR+ A GDIVLI GIE+I IG T+ DP+ P+ LPML +D
Sbjct: 249 GKSIKGRVNQVLTFQGLDRMQTPLAGPGDIVLINGIEDIGIGVTVTDPANPSPLPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV++ ++ I+EV GRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVSETD-EEGIFEVMGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK +NGE +EP E + VDIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVFKNVNGEKHEPIELVTVDIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K D
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLIVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI TLEYA+EFI DDELVEITPK+IR+RKRFL ENERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDATLEYAVEFIEDDELVEITPKSIRIRKRFLTENERKR 603
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F++ + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWKG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|422322180|ref|ZP_16403222.1| translation initiation factor IF-2 [Achromobacter xylosoxidans C54]
gi|317402829|gb|EFV83371.1| translation initiation factor IF-2 [Achromobacter xylosoxidans C54]
Length = 580
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/550 (65%), Positives = 459/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+VEE+GHVA A+KL+DPE+FL +E
Sbjct: 16 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVEELGHVAIAAKLDDPEAFL-DETASV 74
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 75 SEAEQLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETERGMVTF 134
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LV AADDGVMPQTREAI HAK +GVP++VA+ KIDK
Sbjct: 135 LDTPGHEAFTAMRARGAKATDIVILVCAADDGVMPQTREAIHHAKAAGVPMVVAMTKIDK 194
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 195 PSANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGEGIDALLENVLLQAELLELKAPVD 254
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 255 APAKGLVIEARLDKGRGPVATILVQSGTLHRGDVVLAGASFGRVRAMLDENGKPIQAAGP 314
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 315 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 374
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L +SL LSTD+V++QV+H AVG I+ESDINLAIAS A+
Sbjct: 375 -EGTQTLALIVKTDVQGSQEALVQSLTKLSTDEVRVQVVHAAVGGISESDINLAIASNAV 433
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+AS +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EKKE ++GL EIR+
Sbjct: 434 VIGFNVRAEASAKKLAETNGIDVRYYNIIYDAVDEVKAAMSGMLAPEKKEEIIGLVEIRE 493
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ IAGC +L+GL+RRDS++R+LRN + WTG+LDSL+RFKD+VKEVK+GF+C
Sbjct: 494 VYSISRIGNIAGCMVLDGLVRRDSQVRLLRNNVVQWTGQLDSLRRFKDDVKEVKSGFDCG 553
Query: 541 RLSRIENQIQ 550
R N IQ
Sbjct: 554 LTLRGNNDIQ 563
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E ERG+ F
Sbjct: 88 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETERGMVTF------------ 134
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQTR A G +V + K
Sbjct: 135 ---LDTPGHEAFTAMRARGAKATDIVILVCAADDGVMPQTREAIHHAKAAGVPMVVAMTK 191
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A PE V + +++ E D P + SA G
Sbjct: 192 IDKPSANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 230
>gi|388569850|ref|ZP_10156234.1| GTP-binding protein TypA [Hydrogenophaga sp. PBC]
gi|388262945|gb|EIK88551.1| GTP-binding protein TypA [Hydrogenophaga sp. PBC]
Length = 608
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/600 (60%), Positives = 470/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IE+ERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWKGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ V++A FDLFDKL AT+EQLDFPV+Y S ++G+++ E Q +M
Sbjct: 129 KVDKPGANPDKVINAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGPAGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ +LK+VPV K + N PLQLQI +L++S+++G+IG+GRI +G I+ DV++M GPD
Sbjct: 189 ALFDTVLKHVPVQKGDPNAPLQLQISALDFSTFVGRIGVGRISNGTIRPNTDVLVMEGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K +INQ+ F+GLDRV EA GDIVLI GI +I IG T+ D P LPML +D
Sbjct: 249 GKSFKGRINQVLTFQGLDRVQATEAGPGDIVLINGIADIGIGVTVTDVQNPQALPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + +D ++EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQSNVALRVKETD-EDGVFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK ++GE +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVFKDVDGERFEPIEMVTADIEEGHQGAVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N++ + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLI+++F+ Y P K +
Sbjct: 428 KGELVNMDPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLIANIFDGYEP----HKGE 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 VAGRKNGVLISMDDGEIFNYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI++TLEY +EFI DDELVEITPK+IRLRKRFLKE+ERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIQLTLEYGVEFIEDDELVEITPKSIRLRKRFLKEHERKR 603
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWKG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|89900921|ref|YP_523392.1| GTP-binding protein TypA [Rhodoferax ferrireducens T118]
gi|89345658|gb|ABD69861.1| GTP-binding protein TypA [Rhodoferax ferrireducens T118]
Length = 607
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/600 (60%), Positives = 471/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWQGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPI+VVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ ARP+WVV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 130 KVDKPGARPQWVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGGQGEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP + + PLQLQI +L++S+++G+IG+GRI G I+ + DVV+M GPD
Sbjct: 190 ALFNTILKHVPHQQGDPAAPLQLQISALDFSTFVGRIGVGRISQGTIRPMMDVVVMEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GL+RV +A G+IVLI G+ +I IG TI DP P LPML +D
Sbjct: 250 GKAVKGRVNQVLTFQGLERVQTTDAGPGEIVLINGLADIGIGVTITDPVNPAPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV + ++ I+EV GRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQHNVALRVKETD-EEGIFEVMGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREG+EL+VS+PRV+ K +NGE YEP E + +D+EE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGFELAVSKPRVVLKEVNGEKYEPIELVTIDVEEQHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
GDL N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P + D
Sbjct: 429 KGDLINMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----RGD 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS +G+ Y+L KL DRGR+F+ ND VYEGMI+GIH+RDNDL+VN +
Sbjct: 485 IGGRKNGVLISMDAGEIFNYALGKLDDRGRMFVTANDPVYEGMIVGIHNRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI++TLEY +EFI DDELVEITPK+IRLRKR+L E+ERK+
Sbjct: 545 TKQLTNFRVSGKEDAIKITPPIQLTLEYGVEFIEDDELVEITPKSIRLRKRYLTESERKR 604
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWQG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVV 128
Query: 176 NKIDK 180
NK+DK
Sbjct: 129 NKVDK 133
>gi|33602222|ref|NP_889782.1| translation initiation factor IF-2 [Bordetella bronchiseptica RB50]
gi|427814154|ref|ZP_18981218.1| translation initiation factor IF-2 [Bordetella bronchiseptica 1289]
gi|39931249|sp|Q7WHG2.1|IF2_BORBR RecName: Full=Translation initiation factor IF-2
gi|33576660|emb|CAE33738.1| translation initiation factor IF-2 [Bordetella bronchiseptica RB50]
gi|410565154|emb|CCN22706.1| translation initiation factor IF-2 [Bordetella bronchiseptica 1289]
Length = 997
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/550 (64%), Positives = 458/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+V+E GH+A A+KL+DPE+FL +E
Sbjct: 433 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVQEFGHMAIAAKLDDPEAFL-DETAAV 491
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 492 TEAEAEPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETGRGVVTF 551
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK GVPL+VA+NKIDK
Sbjct: 552 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNKIDK 611
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILELKAP+
Sbjct: 612 PEANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELKAPIE 671
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 672 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKQIQTAGP 731
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 732 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 791
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L SL LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 792 -EGTQTLALIVKTDVQGSQEALVSSLTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 850
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EK+E ++GL E+R+
Sbjct: 851 VIGFNVRAEQSAKKLAETNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKREEVIGLVEVRE 910
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+G++RRDS++R+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 911 VYTISRIGTVAGCMVLDGVVRRDSQVRLLRNNVVQWTGHLDSLRRFKDDVKEVKSGFDCG 970
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 971 LTLRGNNDLQ 980
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 505 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETGRGVVTF------------ 551
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 552 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNK 608
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P + SA G
Sbjct: 609 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 647
>gi|410473545|ref|YP_006896826.1| translation initiation factor IF-2 [Bordetella parapertussis Bpp5]
gi|408443655|emb|CCJ50332.1| translation initiation factor IF-2 [Bordetella parapertussis Bpp5]
Length = 957
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/550 (64%), Positives = 458/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+V+E GH+A A+KL+DPE+FL +E
Sbjct: 393 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVQEFGHMAIAAKLDDPEAFL-DETAAV 451
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 452 TEAEAEPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETGRGVVTF 511
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK GVPL+VA+NKIDK
Sbjct: 512 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNKIDK 571
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILELKAP+
Sbjct: 572 PEANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELKAPIE 631
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 632 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKQIQTAGP 691
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 692 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 751
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L SL LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 752 -EGTQTLALIVKTDVQGSQEALVSSLTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 810
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EK+E ++GL E+R+
Sbjct: 811 VIGFNVRAEQSAKKLAETNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKREEVIGLVEVRE 870
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+G++RRDS++R+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 871 VYTISRIGTVAGCMVLDGVVRRDSQVRLLRNNVVQWTGHLDSLRRFKDDVKEVKSGFDCG 930
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 931 LTLRGNNDLQ 940
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 465 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETGRGVVTF------------ 511
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 512 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNK 568
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P + SA G
Sbjct: 569 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 607
>gi|319793515|ref|YP_004155155.1| GTP-binding protein typa [Variovorax paradoxus EPS]
gi|315595978|gb|ADU37044.1| GTP-binding protein TypA [Variovorax paradoxus EPS]
Length = 612
Score = 764 bits (1973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/600 (60%), Positives = 470/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWEGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPI+VVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 130 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAAGEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP K + N PLQLQI +L++S+++G+IG+GRI G +K + DV++M GPD
Sbjct: 190 ALFNTILKHVPSQKGDPNAPLQLQISALDFSTFVGRIGVGRISQGTLKPMTDVLVMEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K +INQ+ F+GLDRV EA G+IVLI GI +I IG T+ D KP LPML +D
Sbjct: 250 GKAIKGRINQVLTFQGLDRVQSTEAGPGEIVLINGIADIGIGVTVTDKDKPAPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV++ ++ I+EV GRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVSETD-EEGIFEVMGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREG+E++VS+PRV+F+T+NGE +EP E + DIEE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGFEMAVSKPRVVFRTVNGEKHEPIEMVTADIEEGHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y K D
Sbjct: 429 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDS----YEAHKGD 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI +TLEY +EFI DDELVEITPK++RLRKRFLKE++RK+
Sbjct: 545 TKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSVRLRKRFLKESDRKR 604
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWEG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVV 128
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 129 NKVDKPGANPDKV 141
>gi|412338372|ref|YP_006967127.1| translation initiation factor IF-2 [Bordetella bronchiseptica 253]
gi|408768206|emb|CCJ52966.1| translation initiation factor IF-2 [Bordetella bronchiseptica 253]
Length = 997
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/550 (64%), Positives = 458/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+V+E GH+A A+KL+DPE+FL +E
Sbjct: 433 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVQEFGHMAIAAKLDDPEAFL-DETAAV 491
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 492 TEAEAEPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETGRGVVTF 551
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK GVPL+VA+NKIDK
Sbjct: 552 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNKIDK 611
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILELKAP+
Sbjct: 612 PEANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELKAPIE 671
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 672 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKQIQTAGP 731
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 732 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 791
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L SL LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 792 -EGTQTLALIVKTDVQGSQEALVSSLTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 850
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EK+E ++GL E+R+
Sbjct: 851 VIGFNVRAEQSAKKLAETNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKREEVIGLVEVRE 910
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+G++RRDS++R+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 911 VYTISRIGTVAGCMVLDGVVRRDSQVRLLRNNVVQWTGHLDSLRRFKDDVKEVKSGFDCG 970
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 971 LTLRGNNDLQ 980
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 505 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETGRGVVTF------------ 551
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 552 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNK 608
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P + SA G
Sbjct: 609 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 647
>gi|427823434|ref|ZP_18990496.1| translation initiation factor IF-2 [Bordetella bronchiseptica
Bbr77]
gi|410588699|emb|CCN03759.1| translation initiation factor IF-2 [Bordetella bronchiseptica
Bbr77]
Length = 997
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/550 (64%), Positives = 457/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+V+E GH A A+KL+DPE+FL +E
Sbjct: 433 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVQEFGHTAIAAKLDDPEAFL-DETAAV 491
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 492 TEAEAEPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETGRGVVTF 551
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK GVPL+VA+NKIDK
Sbjct: 552 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNKIDK 611
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILELKAP+
Sbjct: 612 PEANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELKAPIE 671
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 672 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKQIQTAGP 731
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 732 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 791
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L SL LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 792 -EGTQTLALIVKTDVQGSQEALVSSLTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 850
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EK+E ++GL E+R+
Sbjct: 851 VIGFNVRAEQSAKKLAETNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKREEVIGLVEVRE 910
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+G++RRDS++R+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 911 VYTISRIGTVAGCMVLDGVVRRDSQVRLLRNNVVQWTGHLDSLRRFKDDVKEVKSGFDCG 970
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 971 LTLRGNNDLQ 980
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 505 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETGRGVVTF------------ 551
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 552 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNK 608
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P + SA G
Sbjct: 609 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 647
>gi|410419694|ref|YP_006900143.1| translation initiation factor IF-2 [Bordetella bronchiseptica
MO149]
gi|408446989|emb|CCJ58661.1| translation initiation factor IF-2 [Bordetella bronchiseptica
MO149]
Length = 999
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/550 (64%), Positives = 457/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+V+E GH A A+KL+DPE+FL +E
Sbjct: 435 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVQEFGHTAIAAKLDDPEAFL-DETAAV 493
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 494 TEAEAEPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETGRGVVTF 553
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK GVPL+VA+NKIDK
Sbjct: 554 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNKIDK 613
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILELKAP+
Sbjct: 614 PEANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELKAPIE 673
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 674 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKQIQTAGP 733
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 734 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 793
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L SL LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 794 -EGTQTLALIVKTDVQGSQEALVSSLTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 852
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EK+E ++GL E+R+
Sbjct: 853 VIGFNVRAEQSAKKLAETNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKREEVIGLVEVRE 912
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+G++RRDS++R+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 913 VYTISRIGTVAGCMVLDGVVRRDSQVRLLRNNVVQWTGHLDSLRRFKDDVKEVKSGFDCG 972
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 973 LTLRGNNDLQ 982
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 507 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETGRGVVTF------------ 553
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 554 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNK 610
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P + SA G
Sbjct: 611 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 649
>gi|194289949|ref|YP_002005856.1| translation initiation factor if-2 [Cupriavidus taiwanensis LMG
19424]
gi|238692735|sp|B3R1E4.1|IF2_CUPTR RecName: Full=Translation initiation factor IF-2
gi|193223784|emb|CAQ69791.1| Translation initiation factor IF-2 [Cupriavidus taiwanensis LMG
19424]
Length = 963
Score = 763 bits (1970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 449/539 (83%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A+A+KL+DPE+ L+ + ++
Sbjct: 397 MAVKASEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHKAYAAKLDDPEALLVVDGEEH 456
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T+ G ITF
Sbjct: 457 EDAELLPRPPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVETDRGVITF 516
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINK+DK
Sbjct: 517 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKVDK 576
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++EQV+PEEYGG SPF+ +SAKTG GI LLE +SLQAE+LELKAPV
Sbjct: 577 PEANPDRVKQELVAEQVVPEEYGGDSPFVPVSAKTGAGIEDLLEQVSLQAEVLELKAPVD 636
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+AT+L+ SGTL+ D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 637 APAKGLVVEAQLDKGKGPIATILVSSGTLKRGDVVLAGSAYGRVRAMLDENGKATKEAGP 696
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 697 SIPVEIQGLSEVPAAGEEVLVLPDERKAREIALFRQGKFRDVKLAKQQAAKLENMLEQMT 756
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +I+K DV GS+E L +SL+ LST +V++Q++H VG I+ESD+NLA ASKA+
Sbjct: 757 EGEVQTLPLIVKADVQGSQEALVQSLQKLSTAEVRVQIVHGGVGGISESDVNLATASKAV 816
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RKLA+ N I+IRY+NIIY+ + EIK+ ++ ++ EK+E G E+RQ
Sbjct: 817 IIGFNVRADAGARKLAEHNGIDIRYYNIIYDAVDEIKAAMSGMLAPEKRETTTGTVEVRQ 876
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R+S +R+LRN +I GELDSLKRFKD+VKEVK GFEC
Sbjct: 877 VFRVPKVGAVAGCMVTDGVVKRNSLVRVLRNNVVIHDGELDSLKRFKDDVKEVKQGFEC 935
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 470 VMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHI-GAYHVETDRGVITF------------ 516
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 517 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 573
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANEN 1092
+D+ A P+ V + +++ E D P + SA G E+
Sbjct: 574 VDKPEANPDRVKQEL--VAEQVVPEEYGGDSPFVPVSAKTGAGIED 617
>gi|33596483|ref|NP_884126.1| translation initiation factor IF-2 [Bordetella parapertussis 12822]
gi|39931248|sp|Q7W9A5.1|IF2_BORPA RecName: Full=Translation initiation factor IF-2
gi|33566252|emb|CAE37163.1| translation initiation factor IF-2 [Bordetella parapertussis]
Length = 969
Score = 763 bits (1969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/550 (64%), Positives = 457/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+V+E GH A A+KL+DPE+FL +E
Sbjct: 405 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVQEFGHTAIAAKLDDPEAFL-DETAAV 463
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 464 TEAEAEPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETGRGVVTF 523
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK GVPL+VA+NKIDK
Sbjct: 524 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNKIDK 583
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILELKAP+
Sbjct: 584 PEANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELKAPIE 643
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 644 VPAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKQIQTAGP 703
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 704 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 763
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L SL LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 764 -EGTQTLALIVKTDVQGSQEALVSSLTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 822
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EK+E ++GL E+R+
Sbjct: 823 VIGFNVRAEQSAKKLAETNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKREEVIGLVEVRE 882
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+G++RRDS++R+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 883 VYTISRIGTVAGCMVLDGVVRRDSQVRLLRNNVVQWTGHLDSLRRFKDDVKEVKSGFDCG 942
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 943 LTLRGNNDLQ 952
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 477 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETGRGVVTF------------ 523
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 524 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNK 580
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P + SA G
Sbjct: 581 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 619
>gi|241764255|ref|ZP_04762286.1| GTP-binding protein TypA [Acidovorax delafieldii 2AN]
gi|241366378|gb|EER60900.1| GTP-binding protein TypA [Acidovorax delafieldii 2AN]
Length = 607
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/600 (60%), Positives = 470/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF ++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWKGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD+V+LLIDA EGPMPQTRFVT+KAL LG +PI+VVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 129 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ ILK+VP + N + PLQLQI +L++S+++G+IG+GRI G +K +QDV++M GPD
Sbjct: 189 ALFDTILKHVPPNTGNPDAPLQLQISALDFSTFVGRIGVGRISQGTLKPMQDVIVMEGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDR+ A GDIVLI GIE+I IG T+ DP+ P LPML +D
Sbjct: 249 GKAVKGRVNQVLTFQGLDRMQTPLAGPGDIVLINGIEDIGIGVTVTDPANPAPLPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + ++ I+EV GRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVNETD-EEGIFEVMGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK ++G +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVFKDIDGVKHEPIELVTADIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K D
Sbjct: 428 KGELVNMESDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLIVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI +TLEY +EFI DDELVEITPK++RLRKR+L ENERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSVRLRKRYLTENERKR 603
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F++ + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWKG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|427402926|ref|ZP_18893923.1| translation initiation factor IF-2 [Massilia timonae CCUG 45783]
gi|425718245|gb|EKU81193.1| translation initiation factor IF-2 [Massilia timonae CCUG 45783]
Length = 944
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/578 (62%), Positives = 459/578 (79%), Gaps = 12/578 (2%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK LMKLGQM TINQVLDQETAMILVEEMGH A A+ +DPE+ LL + ++
Sbjct: 379 MSVKASEVIKQLMKLGQMCTINQVLDQETAMILVEEMGHKAFAAAEDDPEA-LLADQGEH 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
ES RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 438 SEFESTSRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVDTPRGMITF 497
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVPL+VAINKIDK
Sbjct: 498 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINKIDK 557
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N DR+ Q+L++E V+PEEYGG SPF+ +SAK G GI+ LLEN+ LQAE+LELKAP
Sbjct: 558 QGANPDRVTQELVAEGVVPEEYGGESPFVPVSAKVGTGIDDLLENVLLQAEVLELKAPTE 617
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+ A+G+++E+RLDKG+GPVAT+L+QSGTL+ D+V+AG+S+GR+R+ML+ENGK I AGP
Sbjct: 618 SLARGLVVEARLDKGRGPVATILVQSGTLKRGDVVLAGSSFGRVRAMLDENGKTIASAGP 677
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENMF +
Sbjct: 678 SIPVEIQGLTEVPSAGEEVMVMADERKAREIALFRQGKFRDVKLAKQQAAKLENMFEQMA 737
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VKNL +I+KTDV GS+E L SL+ LST +V++Q++H AVG I ESD+NLA ASKA+
Sbjct: 738 EGEVKNLPLIVKTDVQGSQEALVGSLQKLSTSEVRVQIVHAAVGGITESDVNLATASKAV 797
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY++IIY+ I EIK+ ++ ++ EK+E + G EIRQ
Sbjct: 798 IIGFNARADAQARKLAEANGVDIRYYSIIYDAIDEIKTALSGMLAPEKRETVTGQVEIRQ 857
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VILV+KV IAGC + +G+++R S +R+LRN +IWTGE+DSLKRFKD+ KEV+AG EC
Sbjct: 858 VILVSKVGAIAGCLVTDGVVKRTSSVRLLRNNIVIWTGEIDSLKRFKDDAKEVRAGLECG 917
Query: 541 RLSRIENQIQRDISEIIAFDIQNPIINIITITEVKITL 578
+ N+IQ ++ + +TEV TL
Sbjct: 918 LSLKGNNEIQ-----------VGDVLEVFEVTEVARTL 944
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 26/180 (14%)
Query: 888 ILLSSFGIIYLSDLLSKRFLHGQN---LFLSDENIYILIKSA-------IIAHVDHGKTT 937
+L +I + ++ K F ++ L+D+ + +S ++ HVDHGKT+
Sbjct: 402 VLDQETAMILVEEMGHKAFAAAEDDPEALLADQGEHSEFESTSRAPVVTVMGHVDHGKTS 461
Query: 938 LIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHAD 997
L+D++ R + I I + ++ RG+ F +DTPGH
Sbjct: 462 LLDYIRRAKVASGEAGGITQHI-GAYHVDTPRGMITF---------------LDTPGHEA 505
Query: 998 FGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWV 1057
F R D V+L++ A +G MPQT+ A G +V +NKID+ A P+ V
Sbjct: 506 FTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVAINKIDKQGANPDRV 565
>gi|384084053|ref|ZP_09995228.1| GTP-binding protein TypA [Acidithiobacillus thiooxidans ATCC 19377]
Length = 608
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/596 (61%), Positives = 457/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +Q + R+MDSN++EKERGITI +KN ++++ T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNDLEKERGITIMAKNTAVQWGDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFG EVER+L MVD VLLL+DAVEGPMPQTRFVTRKAL+LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR + V+ ATFDLFDKL ATEEQLDFPVIY S L GYA E+ + R G+M PLFE
Sbjct: 129 KVDRPGARVDHVISATFDLFDKLGATEEQLDFPVIYASGLQGYAGEDPEVRSGDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL +V + + PLQ+QI L+YSSY+G+I IGRI G +K QD+V+++G D
Sbjct: 189 MILTHVHAPEGDPEGPLQMQIADLDYSSYVGRIAIGRIRRGSMKPGQDIVLIHGVDQTQT 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+I Q+ F GL RV A GDIV +TGIEE IG+TI P P LP IDEPTL
Sbjct: 249 KARILQLLGFDGLKRVPWESATVGDIVAVTGIEEPSIGATIAAPEAPEALPWKPIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AGREGKF+T+RQ+++RL E+ N+ LRV + D ++ VSGRGELHL
Sbjct: 309 NMTFQVNTSPFAGREGKFVTSRQLRDRLYKELLINVALRVEDTDNAD-VFMVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYEL+VSRPRVI + ++G EPYE L VD+EE +QG IM++L R G+L
Sbjct: 368 TILIENMRREGYELAVSRPRVIQRQVDGVWEEPYEALTVDVEETHQGTIMERLGIRRGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + + RVRLEY+IP+RGLIGF EF+T T GTG+ISH+F+ Y P K + R
Sbjct: 428 QDMMPDGRGRVRLEYKIPARGLIGFHTEFLTATSGTGVISHIFDGYGPV----KGSIPAR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS G+AV ++L+ LQDRGR+F++ D VYEGM+IGIHSRDNDL+VNP+KEK+L
Sbjct: 484 NNGVLISAEEGEAVGFALFNLQDRGRMFVSPGDKVYEGMVIGIHSRDNDLVVNPLKEKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSDE I L PIK+TLE A+EF+ DDELVE TP++IR+RKR+L ENERKK
Sbjct: 544 TNMRASGSDENIMLTPPIKMTLEAAVEFLADDELVEATPQSIRIRKRYLTENERKK 599
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + F+ + GIT I A N
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNDLEKERGIT--IMAKNTAVQW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
G I +DTPGH F A R + D V+L+V A +G MPQTR A G+ IV
Sbjct: 66 GDTHINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIV 125
Query: 174 AINKIDKLDINLDRI 188
INK+D+ +D +
Sbjct: 126 VINKVDRPGARVDHV 140
>gi|395004720|ref|ZP_10388724.1| GTP-binding protein TypA/BipA [Acidovorax sp. CF316]
gi|394317344|gb|EJE53915.1| GTP-binding protein TypA/BipA [Acidovorax sp. CF316]
Length = 607
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/600 (61%), Positives = 468/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF ++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD+V+LLIDA EGPMPQTRFVT+KAL LG +PI+VVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 129 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP + + PLQLQI +L++S+++G+IG+GRI G IK + DVV+M GPD
Sbjct: 189 ALFNTILKHVPPNSGDPAAPLQLQISALDFSTFVGRIGVGRISQGTIKPMMDVVVMEGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDR+ A GDIVLI GIE+I IG TI DP+ P+ LPML +D
Sbjct: 249 GKAVKGRVNQVLTFQGLDRMQTPLAGPGDIVLINGIEDIGIGVTITDPANPSPLPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + ++ I+EV GRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVKETD-EEGIFEVMGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK +NGE +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVFKDVNGEKHEPIELVTADIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K D
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI TLEYA+EFI DDELVEITPK+IR+RKR L ENERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDATLEYAVEFIEDDELVEITPKSIRIRKRHLTENERKR 603
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F++ + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|410693507|ref|YP_003624128.1| protein chain initiation factor IF-2 [Thiomonas sp. 3As]
gi|294339931|emb|CAZ88294.1| protein chain initiation factor IF-2 [Thiomonas sp. 3As]
Length = 973
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/540 (66%), Positives = 446/540 (82%), Gaps = 2/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK+LMKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+FL +
Sbjct: 407 MSVKAAEVIKSLMKLGQMVTINQVLDQETAMIVVEELGHTAVAAKLDDPENFLTEDGEGA 466
Query: 61 IT-AESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
+ AE RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G IT
Sbjct: 467 MADAEQFPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVQTPRGIIT 526
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVPL+VA+NKID
Sbjct: 527 FLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVALNKID 586
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K N DR++Q+LI+E V+PEEYGG SPF+ +SAKTG GI+ LLE I LQAE+LELKAP+
Sbjct: 587 KPGANPDRVRQELIAESVVPEEYGGDSPFVPVSAKTGEGIDSLLEQILLQAEVLELKAPI 646
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
PAKG++IESRLDKG+GPVAT+L+QSGTL+ D+V+AGA++GR+R+ML+E GK + EAG
Sbjct: 647 DAPAKGLVIESRLDKGRGPVATILVQSGTLKRGDVVLAGAAFGRVRAMLDELGKPVTEAG 706
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PSIPVEIQGLT+VP +GEE+ V+L+E+KAREI LFRQGK+RDVKL++Q+ K ENMF +
Sbjct: 707 PSIPVEIQGLTEVPSAGEEIMVLLDERKAREIALFRQGKYRDVKLARQQAAKLENMFEQL 766
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
N E +NL +IIK DV GS+E L +L LST ++K+QV+H AVG I+ESD+NLAIAS A
Sbjct: 767 N-EGAQNLPLIIKADVQGSQEALIHALTKLSTSEIKVQVVHAAVGGISESDVNLAIASNA 825
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+IIGFN RADA RKLA+ N I+IRY+NIIY + EIK+ ++ ++ +KKE LGL EIR
Sbjct: 826 VIIGFNTRADAGARKLAENNGIDIRYYNIIYEAVDEIKAAMSGMLTPDKKEETLGLVEIR 885
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
QV + KV +AGC +L GL+RR +++R+LRN +I TGELDSLKRFKD+ +EVK GFEC
Sbjct: 886 QVFRIPKVGAVAGCMVLSGLVRRSAQVRVLRNNVVIHTGELDSLKRFKDDAREVKEGFEC 945
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RGI F
Sbjct: 481 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVQTPRGIITF------------ 527
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 528 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVALNK 584
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 585 IDKPGANPDRV 595
>gi|296135768|ref|YP_003643010.1| translation initiation factor IF-2 [Thiomonas intermedia K12]
gi|295795890|gb|ADG30680.1| translation initiation factor IF-2 [Thiomonas intermedia K12]
Length = 973
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/540 (66%), Positives = 446/540 (82%), Gaps = 2/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK+LMKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+FL +
Sbjct: 407 MSVKAAEVIKSLMKLGQMVTINQVLDQETAMIVVEELGHTAVAAKLDDPENFLTEDGEGA 466
Query: 61 IT-AESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
+ AE RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G IT
Sbjct: 467 MADAEQFPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVQTPRGIIT 526
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVPL+VA+NKID
Sbjct: 527 FLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVALNKID 586
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K N DR++Q+LI+E V+PEEYGG SPF+ +SAKTG GI+ LLE I LQAE+LELKAP+
Sbjct: 587 KPGANPDRVRQELIAESVVPEEYGGDSPFVPVSAKTGEGIDSLLEQILLQAEVLELKAPI 646
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
PAKG++IESRLDKG+GPVAT+L+QSGTL+ D+V+AGA++GR+R+ML+E GK + EAG
Sbjct: 647 DAPAKGLVIESRLDKGRGPVATILVQSGTLKRGDVVLAGAAFGRVRAMLDELGKPVTEAG 706
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PSIPVEIQGLT+VP +GEE+ V+L+E+KAREI LFRQGK+RDVKL++Q+ K ENMF +
Sbjct: 707 PSIPVEIQGLTEVPSAGEEIMVLLDERKAREIALFRQGKYRDVKLARQQAAKLENMFEQL 766
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
N E +NL +IIK DV GS+E L +L LST ++K+QV+H AVG I+ESD+NLAIAS A
Sbjct: 767 N-EGAQNLPLIIKADVQGSQEALIHALTKLSTSEIKVQVVHAAVGGISESDVNLAIASNA 825
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+IIGFN RADA RKLA+ N I+IRY+NIIY + EIK+ ++ ++ +KKE LGL EIR
Sbjct: 826 VIIGFNTRADAGARKLAENNGIDIRYYNIIYEAVDEIKAAMSGMLTPDKKEETLGLVEIR 885
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
QV + KV +AGC +L GL+RR +++R+LRN +I TGELDSLKRFKD+ +EVK GFEC
Sbjct: 886 QVFRIPKVGAVAGCMVLSGLVRRSAQVRVLRNNVVIHTGELDSLKRFKDDAREVKEGFEC 945
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RGI F
Sbjct: 481 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVQTPRGIITF------------ 527
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 528 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPLVVALNK 584
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 585 IDKPGANPDRV 595
>gi|408415181|ref|YP_006625888.1| translation initiation factor IF-2 [Bordetella pertussis 18323]
gi|401777351|emb|CCJ62637.1| translation initiation factor IF-2 [Bordetella pertussis 18323]
Length = 997
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/550 (63%), Positives = 456/550 (82%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+V+E GH A A+KL+DPE+FL +E
Sbjct: 433 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVQEFGHTAIAAKLDDPEAFL-DETAAV 491
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 492 TEAEAEPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETGRGVVTF 551
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK GVPL+VA+NKIDK
Sbjct: 552 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNKIDK 611
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILELKAP+
Sbjct: 612 PEANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELKAPIE 671
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 672 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKQIQTAGP 731
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ E+MF+++
Sbjct: 732 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAANLESMFDNLG 791
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L SL LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 792 -EGTQTLALIVKTDVQGSQEALVSSLTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 850
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EK+E ++GL E+R+
Sbjct: 851 VIGFNVRAEQSAKKLAETNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKREEVIGLVEVRE 910
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+G++RRDS++R+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 911 VYTISRIGTVAGCMVLDGVVRRDSQVRLLRNNVVQWTGHLDSLRRFKDDVKEVKSGFDCG 970
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 971 LTLRGNNDLQ 980
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 505 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETGRGVVTF------------ 551
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 552 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNK 608
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P + SA G
Sbjct: 609 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 647
>gi|423016445|ref|ZP_17007166.1| translation initiation factor IF-2 [Achromobacter xylosoxidans
AXX-A]
gi|338780522|gb|EGP44929.1| translation initiation factor IF-2 [Achromobacter xylosoxidans
AXX-A]
Length = 746
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/550 (65%), Positives = 459/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+VEE+GHVA A+KL+DPE+FL +E
Sbjct: 182 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVEELGHVAIAAKLDDPEAFL-DETASV 240
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 241 SEAEQLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETERGMVTF 300
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LV AADDGVMPQTREAI HAK +GVP++VA+ KIDK
Sbjct: 301 LDTPGHEAFTAMRARGAKATDIVILVCAADDGVMPQTREAIHHAKAAGVPMVVAMTKIDK 360
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 361 PSANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGEGIDALLENVLLQAELLELKAPVD 420
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+ AKG++IE+RLDKG+GPVAT+L+QSGTL D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 421 SAAKGLVIEARLDKGRGPVATILVQSGTLNRGDVVLAGASFGRVRAMLDENGKPIQAAGP 480
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 481 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 540
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L +SL LSTD+V++QV+H AVG I+ESDINLAIAS A+
Sbjct: 541 -EGTQTLALIVKTDVQGSQEALVQSLTKLSTDEVRVQVVHAAVGGISESDINLAIASNAV 599
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+AS +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EKKE ++GL EIR+
Sbjct: 600 VIGFNVRAEASAKKLAETNGIDVRYYNIIYDAVDEVKAAMSGMLAPEKKEEIIGLVEIRE 659
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ IAGC +L+GL+RRDS++R+LRN + WTG+LDSL+RFKD+VKEVK+GF+C
Sbjct: 660 VYSISRIGNIAGCMVLDGLVRRDSQVRLLRNNVVQWTGQLDSLRRFKDDVKEVKSGFDCG 719
Query: 541 RLSRIENQIQ 550
R N IQ
Sbjct: 720 LTLRGNNDIQ 729
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E ERG+ F
Sbjct: 254 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETERGMVTF------------ 300
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQTR A G +V + K
Sbjct: 301 ---LDTPGHEAFTAMRARGAKATDIVILVCAADDGVMPQTREAIHHAKAAGVPMVVAMTK 357
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A PE V + +++ E D P + SA G
Sbjct: 358 IDKPSANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 396
>gi|427821375|ref|ZP_18988438.1| translation initiation factor IF-2 [Bordetella bronchiseptica D445]
gi|410572375|emb|CCN20650.1| translation initiation factor IF-2 [Bordetella bronchiseptica D445]
Length = 823
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/550 (64%), Positives = 457/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+V+E GH A A+KL+DPE+FL +E
Sbjct: 259 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVQEFGHTAIAAKLDDPEAFL-DETAAV 317
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 318 TEAEAEPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETGRGVVTF 377
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK GVPL+VAINKIDK
Sbjct: 378 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAINKIDK 437
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILELKAP+
Sbjct: 438 PEANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELKAPIE 497
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 498 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKQIQTAGP 557
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 558 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 617
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L SL LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 618 -EGTQTLALIVKTDVQGSQEALVSSLTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 676
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EK+E ++GL E+R+
Sbjct: 677 VIGFNVRAEQSAKKLAETNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKREEVIGLVEVRE 736
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+G++RRDS++R+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 737 VYTISRIGTVAGCMVLDGVVRRDSQVRLLRNNVVQWTGHLDSLRRFKDDVKEVKSGFDCG 796
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 797 LTLRGNNDLQ 806
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 331 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETGRGVVTF------------ 377
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V +NK
Sbjct: 378 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAINK 434
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P + SA G
Sbjct: 435 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 473
>gi|171058387|ref|YP_001790736.1| GTP-binding protein TypA [Leptothrix cholodnii SP-6]
gi|170775832|gb|ACB33971.1| GTP-binding protein TypA [Leptothrix cholodnii SP-6]
Length = 606
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/600 (60%), Positives = 468/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MDSN IE+ERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDSNAIERERGITILAKNCAVSWEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKA---RQG-NMI 1101
K+D+ A+P++VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ A + G +M
Sbjct: 129 KVDKPGAKPDFVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEKWGEDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF +LK+V H ++ PLQLQI +L+YS+++G+IG+GRI +G IK DV++ G D
Sbjct: 189 ALFNTVLKHVQPHAGDAAAPLQLQISALDYSTFVGRIGVGRINAGTIKPGMDVLVCEGTD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDRV V EA GDIVLI GI+ + IG T+ DP P LPML +D
Sbjct: 249 GKTVKGRVNQVLTFQGLDRVQVTEAGPGDIVLINGIDALGIGVTVTDPQNPAPLPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV++ +D I+EV GRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQSNVALRVSETS-EDGIFEVMGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTILIENMRREGYEL+VS+PRV+F +NGE +EP E + D+EE +QG +MQ L R
Sbjct: 368 ELHLTILIENMRREGYELAVSKPRVVFHDVNGEKHEPIELVTADVEETHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++FE Y P K +
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFSNEFMNLTRGSGLISNIFEGYEPH----KGE 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ R+NGVLIS +G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 IAGRKNGVLISMDAGEIFTYALGKLDDRGRMFVKPNDPVYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI +TLEY +EFI DDELVEITPK++RLRKRFL ENERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSVRLRKRFLTENERKR 603
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDSNAIERERGITILAKNCAVSWEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDK 180
NK+DK
Sbjct: 128 NKVDK 132
>gi|91775612|ref|YP_545368.1| GTP-binding protein TypA [Methylobacillus flagellatus KT]
gi|91709599|gb|ABE49527.1| GTP-binding protein TypA [Methylobacillus flagellatus KT]
Length = 602
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/596 (61%), Positives = 481/596 (80%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL+Q+GTF +Q ++ R+MDS +IEKERGITI +KN ++ Y GT
Sbjct: 9 AIIAHVDHGKTTMVDKLLQQAGTFAAHQQVSERVMDSGDIEKERGITILAKNTAVNYEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD V+LL+D+VEGPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLGMVDGVVLLVDSVEGPMPQTRFVTKKALALGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV++ TFDLF L AT+EQLDFPV+Y S L+G+A + +M PLFE
Sbjct: 129 KVDRPGARPDWVINQTFDLFANLGATDEQLDFPVVYASGLNGFATLDLNKPSDDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL +V +SN LQLQI +L+YS+Y G++GIGRI +GRIK Q V +M G D++
Sbjct: 189 TILSHVQPPAGDSNAGLQLQISALDYSTYTGRLGIGRIRNGRIKPGQIVAVMKG-DEQVA 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +INQ+ F+GL+RV V EA +GDIV+I+GIEEI IG T+ D P GLP+L +DEPTL
Sbjct: 248 QGRINQVLGFRGLERVQVEEAEAGDIVIISGIEEIGIGVTVADRDNPVGLPILAVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++FMVN SPLAG EGKF+T+RQI++RL+ E+ N+ L+V ++ D ++ VSGRGELHL
Sbjct: 308 TMDFMVNTSPLAGTEGKFVTSRQIRDRLNKELLTNVALKV-EDTEDADVFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYE++V +PRV++K +NG+ EPYE L VD+E+ QG +M++L R G+L
Sbjct: 367 TILLENMRREGYEIAVGKPRVVYKEINGQKCEPYEILTVDLEDDCQGAVMEELGRRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+E + R RLEY+IP+RGLIGFQ+EF+T+TRGTGL++H+F+EYAP K D+ R
Sbjct: 427 QNMESDGNGRTRLEYKIPARGLIGFQSEFLTMTRGTGLMAHIFDEYAPV----KADMPGR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLIS G+AVAY+LWKLQDRGR+F + D +YEGMIIGIHSR+NDL+VNPIK KQL
Sbjct: 483 RNGVLISSEQGEAVAYALWKLQDRGRMFSSPGDKLYEGMIIGIHSRENDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA++L+ P+++TLE A+EFI+DDELVEITPK+IR+RKR L E+ERK+
Sbjct: 543 TNVRASGTDEAVRLVPPVQLTLESAVEFIDDDELVEITPKSIRIRKRHLLEHERKR 598
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------EAGGITQHIG----AYNVVTNHGS 117
+ I+ HVDHGKT+++D + + F+ ++G I + G A N N+
Sbjct: 8 IAIIAHVDHGKTTMVDKLLQQAGTFAAHQQVSERVMDSGDIEKERGITILAKNTAVNYEG 67
Query: 118 --ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D VVL+V + +G MPQTR A G+ IV I
Sbjct: 68 THINIVDTPGHADFGGEVERVLGMVDGVVLLVDSVEGPMPQTRFVTKKALALGLRPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|375105984|ref|ZP_09752245.1| GTP-binding protein TypA/BipA [Burkholderiales bacterium JOSHI_001]
gi|374666715|gb|EHR71500.1| GTP-binding protein TypA/BipA [Burkholderiales bacterium JOSHI_001]
Length = 611
Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/600 (60%), Positives = 465/600 (77%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF ++ + +MDSN IE+ERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDSNAIERERGITILAKNCAVSWKGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD VLLLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDGVLLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN----ENSKARQGNMI 1101
K+D+ A + VV+A FDLFDKL A +EQLDFPV+Y S ++G+++ E + +M
Sbjct: 130 KVDKPGANCDKVVNAAFDLFDKLGANDEQLDFPVVYASGINGWSSLTEGEPGEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LFE +LK+VP H + PLQ Q+ +L+YS+++G+IG+GRI +G +K DV++M GPD
Sbjct: 190 ALFETVLKHVPAHDGDPEAPLQFQVSALDYSTFIGRIGVGRINAGTLKPGMDVLVMEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDRV V A GDIVLI GIE+I IG TI DP+ P LPML +D
Sbjct: 250 GKQTKGRVNQVLCFEGLDRVQVTSARPGDIVLINGIEDIGIGVTITDPTNPQPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV + +D I+EVSGRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQSNVALRVKETD-EDGIFEVSGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+F ++GE +EP E + VDIEE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGYELAVSKPRVVFHQVDGERHEPVELVTVDIEEQHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
GDL N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P+ K +
Sbjct: 429 KGDLVNMEPDGRGRVRLEYRIPARGLIGFSNEFMNLTRGSGLISNIFDGYEPY----KGE 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ R+NGVLIS G+ Y+L KL DRGR+F+ D VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IASRKNGVLISMDDGEIFTYALGKLDDRGRMFVKAGDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI ++LEY +EFI DDELVEITPK+IR+RKR LKE++RK+
Sbjct: 545 TKQLTNFRVSGKEDAIKITPPIDLSLEYGVEFIEDDELVEITPKSIRVRKRHLKEHDRKR 604
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F++ + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDSNAIERERGITILAKNCAVSWKG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L++ A +G MPQTR A G+ IV +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDGVLLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 128
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 129 NKVDKPGANCDKV 141
>gi|33592375|ref|NP_880019.1| translation initiation factor IF-2 [Bordetella pertussis Tohama I]
gi|384203677|ref|YP_005589416.1| translation initiation factor IF-2 [Bordetella pertussis CS]
gi|39931244|sp|Q7VYR2.1|IF2_BORPE RecName: Full=Translation initiation factor IF-2
gi|33572020|emb|CAE41543.1| translation initiation factor IF-2 [Bordetella pertussis Tohama I]
gi|332381791|gb|AEE66638.1| translation initiation factor IF-2 [Bordetella pertussis CS]
Length = 997
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/550 (63%), Positives = 456/550 (82%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+V+E GH A A+KL+DPE+FL +E
Sbjct: 433 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVQEFGHTAIAAKLDDPEAFL-DETAAV 491
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 492 TEAEAEPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETGRGVVTF 551
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK GVPL+VA+NKIDK
Sbjct: 552 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNKIDK 611
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILELKAP+
Sbjct: 612 PEANPERVKQELVAEEVVPEEYGGDVPFVPVSAKTGAGIDDLLENVLLQAEILELKAPIE 671
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 672 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKQIQTAGP 731
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKL++Q+ E+MF+++
Sbjct: 732 SIPVEIQGLTEVPAAGDELMVLSDERKAREIALFRQGKFRDVKLARQQAANLESMFDNLG 791
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L SL LSTD+V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 792 -EGTQTLALIVKTDVQGSQEALVSSLTKLSTDEVRVQVVHAAVGGISESDVNLAIASNAV 850
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EK+E ++GL E+R+
Sbjct: 851 VIGFNVRAEQSAKKLAETNGIDLRYYNIIYDAVDEVKAAMSGMLAPEKREEVIGLVEVRE 910
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ +AGC +L+G++RRDS++R+LRN + WTG LDSL+RFKD+VKEVK+GF+C
Sbjct: 911 VYTISRIGTVAGCMVLDGVVRRDSQVRLLRNNVVQWTGHLDSLRRFKDDVKEVKSGFDCG 970
Query: 541 RLSRIENQIQ 550
R N +Q
Sbjct: 971 LTLRGNNDLQ 980
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 505 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETGRGVVTF------------ 551
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 552 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAGGVPLVVAVNK 608
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P + SA G
Sbjct: 609 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 647
>gi|407939639|ref|YP_006855280.1| GTP-binding protein TypA [Acidovorax sp. KKS102]
gi|407897433|gb|AFU46642.1| GTP-binding protein TypA [Acidovorax sp. KKS102]
Length = 608
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/600 (60%), Positives = 468/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF ++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWKGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD+V+LLIDA EGPMPQTRFVT+KAL LG +PI+VVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 130 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ ILK+VP + N + PLQLQI +L++SS++G+IG+GRI G +K QDV++M GPD
Sbjct: 190 ALFDTILKHVPPNSGNPDAPLQLQISALDFSSFVGRIGVGRISQGTLKPAQDVLVMEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDR+ A GDIVLI GIE+I IG T+ DP+ P LPML +D
Sbjct: 250 GKTTKGRVNQVLTFQGLDRMQTPLAGPGDIVLINGIEDIGIGVTVTDPANPAPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + ++ ++EV GRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVKETD-EEGVFEVMGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK ++G +EP E + DIEE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGYELAVSKPRVVFKDIDGVKHEPIELVTADIEEGHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K D
Sbjct: 429 KGELVNMESDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGD 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI +TLEY +EFI DDELVEITPK++RLRKR L ENERK+
Sbjct: 545 TKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSVRLRKRHLTENERKR 604
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F++ + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWKG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVV 128
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 129 NKVDKPGANPDKV 141
>gi|293604238|ref|ZP_06686646.1| translation initiation factor IF-2 [Achromobacter piechaudii ATCC
43553]
gi|292817463|gb|EFF76536.1| translation initiation factor IF-2 [Achromobacter piechaudii ATCC
43553]
Length = 1018
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/550 (64%), Positives = 459/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK+LMKLGQMVTINQVLDQETAMI+VEE+GHVA A+KL+DPE+FL +E
Sbjct: 454 MSVKAAEVIKHLMKLGQMVTINQVLDQETAMIVVEELGHVAIAAKLDDPEAFL-DESATV 512
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 513 SEAEQLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVQTERGMVTF 572
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVA+DDGVMPQTREAI HAK +GVP++VA+ KIDK
Sbjct: 573 LDTPGHEAFTAMRARGAKATDIVILVVASDDGVMPQTREAIHHAKAAGVPMVVAVTKIDK 632
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +R+KQ+L++EQV+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAE+LELKAP
Sbjct: 633 PSANPERVKQELVAEQVVPEEYGGDVPFVGVSAKTGEGIDDLLENVLLQAEVLELKAPED 692
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 693 APAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKPIQSAGP 752
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL + +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 753 SIPVEIQGLTEVPAAGDELMALSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 812
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L +SL LSTD+V++QV+H AVG I+E+DINLAIAS A+
Sbjct: 813 -EGTQTLTLIVKTDVQGSQEALVQSLVKLSTDEVRVQVVHAAVGGISETDINLAIASNAV 871
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+AS +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EKKE ++GL EIR+
Sbjct: 872 VIGFNVRAEASAKKLAENNGIDVRYYNIIYDAVDEVKAAMSGMLAPEKKEEIIGLVEIRE 931
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ IAGC +L+G++RRDS++R+LRN + WTG L+SL+RFKD+VKEVK+GF+C
Sbjct: 932 VYSISRLGNIAGCMVLDGIVRRDSQVRLLRNNVVHWTGHLESLRRFKDDVKEVKSGFDCG 991
Query: 541 RLSRIENQIQ 550
R N IQ
Sbjct: 992 LTLRGNNDIQ 1001
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ ERG+ F
Sbjct: 526 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVQTERGMVTF------------ 572
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ + +G MPQTR A G +V V K
Sbjct: 573 ---LDTPGHEAFTAMRARGAKATDIVILVVASDDGVMPQTREAIHHAKAAGVPMVVAVTK 629
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A PE V + +++ E D P + SA G
Sbjct: 630 IDKPSANPERVKQEL--VAEQVVPEEYGGDVPFVGVSAKTG 668
>gi|421484087|ref|ZP_15931659.1| translation initiation factor IF-2 [Achromobacter piechaudii HLE]
gi|400197794|gb|EJO30758.1| translation initiation factor IF-2 [Achromobacter piechaudii HLE]
Length = 1022
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/550 (64%), Positives = 458/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLGQMVTINQVLDQETAMI+VEE+GHVA A+KL+DPE+FL +E
Sbjct: 458 MSVKAAEVIKQLMKLGQMVTINQVLDQETAMIVVEELGHVAIAAKLDDPEAFL-DETATV 516
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 517 SEAEQLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVQTERGMVTF 576
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVA+DDGVMPQTREAI HAK +GVP++VA+ KIDK
Sbjct: 577 LDTPGHEAFTAMRARGAKATDIVILVVASDDGVMPQTREAIHHAKAAGVPMVVAVTKIDK 636
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +R+KQ+L++EQV+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 637 PSANPERVKQELVAEQVVPEEYGGDVPFVGVSAKTGEGIDDLLENVLLQAEVLELKAPVE 696
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE+RLDKG+GPVAT+L+QSGTL+ D+V+AGAS+GR+R+ML+ENGK I AGP
Sbjct: 697 AAAKGLVIEARLDKGRGPVATILVQSGTLKRGDVVLAGASFGRVRAMLDENGKPIQSAGP 756
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL + +E+KAREI LFRQGKFRDVKL++Q+ K E+MF+++
Sbjct: 757 SIPVEIQGLTEVPAAGDELMALSDERKAREIALFRQGKFRDVKLARQQAAKLESMFDNLG 816
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +I+KTDV GS+E L +SL LSTD+V++QV+H AVG I+E+DINLAIAS A+
Sbjct: 817 -EGTQTLTLIVKTDVQGSQEALVQSLVKLSTDEVRVQVVHAAVGGISETDINLAIASNAV 875
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+AS +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ EKKE ++GL EIR+
Sbjct: 876 VIGFNVRAEASAKKLAENNGIDVRYYNIIYDAVDEVKAAMSGMLAPEKKEEIIGLVEIRE 935
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++++ IAGC +L+G++RRDS++R+LRN + WTG L+SL+RFKD+VKEVK+GF+C
Sbjct: 936 VYSISRLGNIAGCMVLDGIVRRDSQVRLLRNNVVHWTGHLESLRRFKDDVKEVKSGFDCG 995
Query: 541 RLSRIENQIQ 550
R N IQ
Sbjct: 996 LTLRGNNDIQ 1005
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ ERG+ F
Sbjct: 530 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVQTERGMVTF------------ 576
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ + +G MPQTR A G +V V K
Sbjct: 577 ---LDTPGHEAFTAMRARGAKATDIVILVVASDDGVMPQTREAIHHAKAAGVPMVVAVTK 633
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A PE V + +++ E D P + SA G
Sbjct: 634 IDKPSANPERVKQEL--VAEQVVPEEYGGDVPFVGVSAKTG 672
>gi|365089884|ref|ZP_09328392.1| GTP-binding protein TypA [Acidovorax sp. NO-1]
gi|363416577|gb|EHL23681.1| GTP-binding protein TypA [Acidovorax sp. NO-1]
Length = 608
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/600 (60%), Positives = 469/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF ++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWKGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD+V+LLIDA EGPMPQTRFVT+KAL LG +PI+VVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 130 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ IL +VP + ++N PLQLQI +L++SS++G+IG+GRI G +K +QDV++M GPD
Sbjct: 190 ALFDTILSHVPPNTGDANAPLQLQISALDFSSFVGRIGVGRISQGTLKPMQDVIVMEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDR+ A GDIVLI GIE+I IG T+ DP+ P LPML +D
Sbjct: 250 GKAVKGRVNQVLTFQGLDRMQTPLAGPGDIVLINGIEDIGIGVTVTDPANPAPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + ++ I+EV GRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVNETD-EEGIFEVMGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK ++G +EP E + DIEE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGYELAVSKPRVVFKDIDGVKHEPIELVTADIEEGHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K +
Sbjct: 429 KGELVNMESDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGE 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI +TLEY +EFI DDELVEITPK+IRLRKR L ENERK+
Sbjct: 545 TKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSIRLRKRHLTENERKR 604
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F++ + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWKG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVV 128
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 129 NKVDKPGANPDKV 141
>gi|398809453|ref|ZP_10568303.1| GTP-binding protein TypA/BipA [Variovorax sp. CF313]
gi|398085928|gb|EJL76570.1| GTP-binding protein TypA/BipA [Variovorax sp. CF313]
Length = 612
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/600 (60%), Positives = 470/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWEGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPI+VVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E ++ Q +M
Sbjct: 130 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAQGEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP K + PLQLQI +L++S+++G+IG+GRI G +K + DV++M GPD
Sbjct: 190 ALFNTILKHVPSQKGDPAAPLQLQISALDFSTFVGRIGVGRISQGTLKPMTDVIVMEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDRV EA G+IVLI GI +I IG T+ D + P LPML +D
Sbjct: 250 GKAVKGRVNQVLTFQGLDRVQATEAGPGEIVLINGIADIGIGVTVTDAANPAPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV + ++ ++EV GRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQHNVALRVNETD-EEGVFEVMGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYE++VS+PRV+F+ +NGE +EP E + DIEE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGYEMAVSKPRVVFRNVNGEKHEPIELVTADIEEQHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K +
Sbjct: 429 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGE 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IGSRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI++TLEY +EFI DDELVEITPK++RLRKR+LKE+ERK+
Sbjct: 545 TKQLTNFRVSGKEDAIKITPPIELTLEYGVEFIEDDELVEITPKSVRLRKRYLKEHERKR 604
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWEG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVV 128
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 129 NKVDKPGANPDKV 141
>gi|330816694|ref|YP_004360399.1| translation initiation factor IF-2 [Burkholderia gladioli BSR3]
gi|327369087|gb|AEA60443.1| Translation initiation factor IF-2 [Burkholderia gladioli BSR3]
Length = 988
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/539 (66%), Positives = 449/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 423 MSVKASEVIKIMMKLGQMVTINQVLDQETAMIIVEELGHRAVAAKLDDPEALLV-EGEVG 481
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 482 VDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 541
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 542 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 601
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E V+PEEYGG SPF+++SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 602 PDANPDRVKQELVAEGVVPEEYGGDSPFVAVSAKTGSGIDDLLENVLLQAEVLELKAPVE 661
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK AGP
Sbjct: 662 APAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKSAGP 721
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 722 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 781
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 782 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 841
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 842 IIGFNTRADAQARKLAESNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREIITGMVEVRQ 901
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 902 VIKVPKVGLVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 960
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 495 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 541
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 542 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 598
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A P+ V + + + E D P + SA G
Sbjct: 599 IDKPDANPDRVKQEL--VAEGVVPEEYGGDSPFVAVSAKTG 637
>gi|238027584|ref|YP_002911815.1| translation initiation factor IF-2 [Burkholderia glumae BGR1]
gi|237876778|gb|ACR29111.1| Translation initiation factor IF-2 [Burkholderia glumae BGR1]
Length = 974
Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 447/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 409 MSVKASEVIKVMMKLGQMVTINQVLDQETAMIIVEELGHRALAAKLDDPEALLV-EGEVG 467
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 468 VDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 527
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 528 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 587
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 588 PDANPDRVKQELVAESVVPEEYGGDSPFVEVSAKTGAGIDDLLENVLLQAEVLELKAPVE 647
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK AGP
Sbjct: 648 APAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKTAGP 707
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 708 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 767
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 768 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 827
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 828 IIGFNTRADAQARKLAETNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 887
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 888 VFKVPKIGSVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFEC 946
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 481 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 527
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 528 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 584
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A P+ V + + + E D P + SA G
Sbjct: 585 IDKPDANPDRVKQEL--VAESVVPEEYGGDSPFVEVSAKTG 623
>gi|241662814|ref|YP_002981174.1| translation initiation factor IF-2 [Ralstonia pickettii 12D]
gi|309782263|ref|ZP_07676991.1| translation initiation factor IF-2 [Ralstonia sp. 5_7_47FAA]
gi|404377955|ref|ZP_10983055.1| translation initiation factor IF-2 [Ralstonia sp. 5_2_56FAA]
gi|240864841|gb|ACS62502.1| translation initiation factor IF-2 [Ralstonia pickettii 12D]
gi|308918956|gb|EFP64625.1| translation initiation factor IF-2 [Ralstonia sp. 5_7_47FAA]
gi|348615886|gb|EGY65394.1| translation initiation factor IF-2 [Ralstonia sp. 5_2_56FAA]
Length = 964
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 446/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ + +
Sbjct: 398 MSVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAVAAKLDDPEAMLVGDVQEQ 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T+ G ITF
Sbjct: 458 TNAEAETRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETDRGVITF 517
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAI K+DK
Sbjct: 518 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAITKVDK 577
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E VIPEEYGG PF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 578 PEANPDRVKQELVAESVIPEEYGGDVPFVPVSAKTGEGIDSLLENVLLQAEVLELKAPVN 637
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 638 APAKGLVVEAQLDKGKGPIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKEAGP 697
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K ENM ++
Sbjct: 698 SIPVEIQGLSEVPGAGEEVLVLPDERKAREIALFRQGKFRDVKLARQQAAKLENMLEQMS 757
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ VK+L +IIK DV GS+E L SLK LSTD+V++Q++H AVG I ESD+NLA ASKA+
Sbjct: 758 EGDVKSLPLIIKADVQGSQEALVHSLKKLSTDEVRVQIVHAAVGGITESDVNLATASKAV 817
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ + I+IRY+NIIY+ + E+K+ ++ ++ EK+E GL E+RQ
Sbjct: 818 IIGFNTRADAGARKLAENHGIDIRYYNIIYDAVDEVKAAMSGMLSPEKREETTGLVEVRQ 877
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G ++R+S +R+LR +I++GELDSLKRFKD+VKEVK GFEC
Sbjct: 878 VFHVPKVGAVAGCMVLDGFVKRNSLVRVLRANVVIFSGELDSLKRFKDDVKEVKQGFEC 936
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 471 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETDRGVITF------------ 517
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V + K
Sbjct: 518 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAITK 574
Query: 1047 IDRSNARPEWV 1057
+D+ A P+ V
Sbjct: 575 VDKPEANPDRV 585
>gi|430809579|ref|ZP_19436694.1| translation initiation factor IF-2 [Cupriavidus sp. HMR-1]
gi|429497940|gb|EKZ96457.1| translation initiation factor IF-2 [Cupriavidus sp. HMR-1]
Length = 979
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/539 (64%), Positives = 447/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ + +
Sbjct: 413 MAVKASEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHKAFAAKLDDPEALLVVDGEDH 472
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T+ G ITF
Sbjct: 473 ADAEMLPRPPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVETDRGVITF 532
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAI K+DK
Sbjct: 533 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAITKVDK 592
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++EQV+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LEL+APV
Sbjct: 593 PEANPDRVKQELVAEQVVPEEYGGESPFVPVSAKTGQGIDDLLENVLLQAEVLELRAPVD 652
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+AT+L+ SGTL+ D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 653 APAKGLVVEAQLDKGKGPIATILVSSGTLKRGDVVLAGSAYGRVRAMLDENGKPSKEAGP 712
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E M +
Sbjct: 713 SIPVEIQGLSEVPAAGEEVLVLPDERKAREIALFRQGKFRDVKLAKQQAAKLETMLEQMA 772
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +I+K DV GS+E L +SL+ LST +V++Q++H VG I+ESD+NLA ASKA+
Sbjct: 773 EGEVQTLPLIVKADVQGSQEALVQSLQKLSTGEVRVQIVHGGVGGISESDVNLATASKAV 832
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RKLA+ N I+IRY+NIIY+ + EIK+ ++ ++ EK+E +G E+RQ
Sbjct: 833 IIGFNVRADAGARKLAEHNGIDIRYYNIIYDAVDEIKAAMSGMLAPEKRETTIGQVEVRQ 892
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +GLI+R+S +R+LRN +I GELDSLKRFKD+VKEVK GFEC
Sbjct: 893 VFRVPKVGAVAGCMVTDGLIKRNSMVRVLRNNVVIHDGELDSLKRFKDDVKEVKQGFEC 951
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 486 VMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHI-GAYHVETDRGVITF------------ 532
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V + K
Sbjct: 533 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAITK 589
Query: 1047 IDRSNARPEWV 1057
+D+ A P+ V
Sbjct: 590 VDKPEANPDRV 600
>gi|339326337|ref|YP_004686030.1| translation initiation factor IF-2 [Cupriavidus necator N-1]
gi|338166494|gb|AEI77549.1| translation initiation factor IF-2 [Cupriavidus necator N-1]
Length = 962
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/539 (64%), Positives = 446/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A+A+KL+DPE+ L+ ++
Sbjct: 396 MAVKASEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHKAYAAKLDDPEALLVVGGEEH 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T+ G ITF
Sbjct: 456 TDAELLPRPPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVETDRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++EQV+PEEYGG SPF+ +SAK G G+ LLE + LQAE+LEL APV
Sbjct: 576 PDANPDRVKQELVAEQVVPEEYGGDSPFVPVSAKMGTGVEDLLEQVLLQAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+AT+L+ SGTL+ D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 636 APAKGLVVEAQLDKGKGPIATILVSSGTLKRGDVVLAGSAYGRVRAMLDENGKPTKEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 696 SIPVEIQGLSEVPAAGEEVLVLPDERKAREIALFRQGKFRDVKLAKQQAAKLENMLEQMA 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +I+K DV GS+E L +SL+ LST +V++Q++H VG I+ESD+NLA ASKA+
Sbjct: 756 EGEVQTLPLIVKADVQGSQEALVQSLQKLSTAEVRVQIVHGGVGGISESDVNLATASKAV 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RKLA+ N I+IRY+NIIY+ + EIK+ ++ ++ EK+E +G E+RQ
Sbjct: 816 IIGFNVRADAGARKLAEHNGIDIRYYNIIYDAVDEIKAAMSGMLAPEKRETTIGQVEVRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +GL++R+S +R+LRN +I GELDSLKRFKD+VKEVK GFEC
Sbjct: 876 VFRVPKIGAVAGCMVTDGLVKRNSLVRVLRNNVVIHDGELDSLKRFKDDVKEVKQGFEC 934
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHI-GAYHVETDRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 572
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANEN 1092
ID+ +A P+ V + +++ E D P + SA G E+
Sbjct: 573 IDKPDANPDRVKQEL--VAEQVVPEEYGGDSPFVPVSAKMGTGVED 616
>gi|113868281|ref|YP_726770.1| translation initiation factor IF-2 [Ralstonia eutropha H16]
gi|123329123|sp|Q0K9B9.1|IF2_RALEH RecName: Full=Translation initiation factor IF-2
gi|113527057|emb|CAJ93402.1| translation initiation factor 2 (IF-2, GTPase) [Ralstonia eutropha
H16]
Length = 962
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/539 (64%), Positives = 446/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A+A+KL+DPE+ L+ ++
Sbjct: 396 MAVKASEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHKAYAAKLDDPEALLVVGGEEH 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T+ G ITF
Sbjct: 456 TDAELLPRPPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVETDRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++EQV+PEEYGG SPF+ +SAK G G+ LLE + LQAE+LEL APV
Sbjct: 576 PDANPDRVKQELVAEQVVPEEYGGDSPFVPVSAKMGTGVEDLLEQVLLQAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+AT+L+ SGTL+ D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 636 APAKGLVVEAQLDKGKGPIATILVSSGTLKRGDVVLAGSAYGRVRAMLDENGKPTKEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 696 SIPVEIQGLSEVPAAGEEVLVLPDERKAREIALFRQGKFRDVKLAKQQAAKLENMLEQMA 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +I+K DV GS+E L +SL+ LST +V++Q++H VG I+ESD+NLA ASKA+
Sbjct: 756 EGEVQTLPLIVKADVQGSQEALVQSLQKLSTAEVRVQIVHGGVGGISESDVNLATASKAV 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RKLA+ N I+IRY+NIIY+ + EIK+ ++ ++ EK+E +G E+RQ
Sbjct: 816 IIGFNVRADAGARKLAEHNGIDIRYYNIIYDAVDEIKAAMSGMLAPEKRETTIGQVEVRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +GL++R+S +R+LRN +I GELDSLKRFKD+VKEVK GFEC
Sbjct: 876 VFRVPKIGAVAGCMVTDGLVKRNSLVRVLRNNVVIHDGELDSLKRFKDDVKEVKQGFEC 934
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHI-GAYHVETDRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 572
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANEN 1092
ID+ +A P+ V + +++ E D P + SA G E+
Sbjct: 573 IDKPDANPDRVKQEL--VAEQVVPEEYGGDSPFVPVSAKMGTGVED 616
>gi|347821916|ref|ZP_08875350.1| GTP-binding protein TypA [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 608
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/600 (60%), Positives = 469/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IE+ERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWEGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD VLLLIDA EGPMPQTRFVT+KAL LG +PIVVVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDGVLLLIDAQEGPMPQTRFVTKKALALGLRPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL A++EQLDFPV+Y S ++G+A+ E + Q +M
Sbjct: 130 KVDKPGANPDKVVNAAFDLFDKLGASDEQLDFPVVYASGINGWASLEEGAAGEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF +L++VP + PLQLQI +L++SS++G+IG+GRI G I+ DV++M GP+
Sbjct: 190 ALFNTVLRHVPAQTGDPAAPLQLQISALDFSSFVGRIGVGRIGQGTIRPGMDVLVMEGPE 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDRV V+EA G+IVLI GI +I IG T+ DP P LPML +D
Sbjct: 250 GKSAKGRVNQVLTFQGLDRVQVSEAGPGNIVLINGIVDIGIGVTVTDPVSPAPLPMLEVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV + K +D I+EV+GRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQHNVALRVKETK-EDGIFEVAGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV++K +NGE EP E + VDIEE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGYELAVSKPRVLYKEINGEKCEPIELVTVDIEESHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLI+++F+ Y P K +
Sbjct: 429 RGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLIANIFDRYEPH----KGE 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVRANDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI +TLEY +EFI+DDELVEITPK++RLRKR L ENERK+
Sbjct: 545 TKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIDDDELVEITPKSVRLRKRHLTENERKR 604
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWEG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L++ A +G MPQTR A G+ IV +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDGVLLLIDAQEGPMPQTRFVTKKALALGLRPIVVV 128
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 129 NKVDKPGANPDKV 141
>gi|94310969|ref|YP_584179.1| translation initiation factor IF-2 [Cupriavidus metallidurans CH34]
gi|122987921|sp|Q1LLR6.1|IF2_RALME RecName: Full=Translation initiation factor IF-2
gi|93354821|gb|ABF08910.1| translation initiation factor 2 (IF-2, GTPase) [Cupriavidus
metallidurans CH34]
Length = 979
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/539 (64%), Positives = 447/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ + +
Sbjct: 413 MAVKASEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHKAFAAKLDDPEALLVVDGEDH 472
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T+ G ITF
Sbjct: 473 GDAEMLPRPPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVETDRGVITF 532
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAI K+DK
Sbjct: 533 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAITKVDK 592
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++EQV+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LEL+APV
Sbjct: 593 PEANPDRVKQELVAEQVVPEEYGGESPFVPVSAKTGQGIDDLLENVLLQAEVLELRAPVD 652
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+AT+L+ SGTL+ D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 653 APAKGLVVEAQLDKGKGPIATILVSSGTLKRGDVVLAGSAYGRVRAMLDENGKPSKEAGP 712
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E M +
Sbjct: 713 SIPVEIQGLSEVPAAGEEVLVLPDERKAREIALFRQGKFRDVKLAKQQAAKLETMLEQMA 772
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +I+K DV GS+E L +SL+ LST +V++Q++H VG I+ESD+NLA ASKA+
Sbjct: 773 EGEVQTLPLIVKADVQGSQEALVQSLQKLSTSEVRVQIVHGGVGGISESDVNLATASKAV 832
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RKLA+ N I+IRY+NIIY+ + EIK+ ++ ++ EK+E +G E+RQ
Sbjct: 833 IIGFNVRADAGARKLAEHNGIDIRYYNIIYDAVDEIKAAMSGMLAPEKRETTIGQVEVRQ 892
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +GLI+R+S +R+LRN +I GELDSLKRFKD+VKEVK GFEC
Sbjct: 893 VFRVPKVGAVAGCMVTDGLIKRNSMVRVLRNNVVIHDGELDSLKRFKDDVKEVKQGFEC 951
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 486 VMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHI-GAYHVETDRGVITF------------ 532
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V + K
Sbjct: 533 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAITK 589
Query: 1047 IDRSNARPEWV 1057
+D+ A P+ V
Sbjct: 590 VDKPEANPDRV 600
>gi|319762637|ref|YP_004126574.1| GTP-binding protein TypA [Alicycliphilus denitrificans BC]
gi|330824727|ref|YP_004388030.1| GTP-binding protein TypA [Alicycliphilus denitrificans K601]
gi|317117198|gb|ADU99686.1| GTP-binding protein TypA [Alicycliphilus denitrificans BC]
gi|329310099|gb|AEB84514.1| GTP-binding protein TypA [Alicycliphilus denitrificans K601]
Length = 609
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/600 (60%), Positives = 468/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF ++ + +MDSN IE+ERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAAHEKVVDTVMDSNAIERERGITILAKNCAVSWEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ ARP++VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ + + Q +M
Sbjct: 129 KVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEQGAPGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP K + P+Q+Q+ +L+YS+++G+IG+GRI G +K+ QDV++M GPD
Sbjct: 189 ALFNTILKHVPSVKGDPAAPVQMQVSALDYSTFVGRIGVGRITQGTLKAGQDVLVMAGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K +INQI F+GLDRV V+EA +IVLI GIE + IG TI DP+ P LPML ID
Sbjct: 249 GASYKGRINQIHQFQGLDRVQVSEAGPSEIVLINGIENVGIGETITDPANPQPLPMLKID 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + +D I+EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQRELRSNVALRVKETD-EDGIFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+E MRREGYEL+VS+PRV+FK ++G EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLEEMRREGYELAVSKPRVVFKDIDGVRCEPIELVTADIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K +
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGE 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ D VYEGMI+G+H+RDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVRAGDPVYEGMIVGVHNRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI+++LEY +EFI +DELVEITPK+IRLRKR LKE+ERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKVTPPIELSLEYGVEFIEEDELVEITPKSIRLRKRHLKEHERKR 603
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 117/280 (41%), Gaps = 39/280 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+ + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAAHEKVVDTVMDSNAIERERGITILAKNCAVSWEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI---------KQDLISEQV-IPEEYGGASPFISISAKTGVGINKLLEN 225
NK+DK D + K EQ+ P Y S + G +
Sbjct: 128 NKVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEQGAPGEQWGPDM 187
Query: 226 ISLQAEILELKAPVT-TPAKGVIIE-SRLDKGK--GPVATVLIQSGTLRCS-DIVVA--- 277
+L IL+ V PA V ++ S LD G + I GTL+ D++V
Sbjct: 188 SALFNTILKHVPSVKGDPAAPVQMQVSALDYSTFVGRIGVGRITQGTLKAGQDVLVMAGP 247
Query: 278 -GASY-GRIRSMLNENGKN---ILEAGPSIPVEIQGLTKV 312
GASY GRI + G + + EAGPS V I G+ V
Sbjct: 248 DGASYKGRINQIHQFQGLDRVQVSEAGPSEIVLINGIENV 287
>gi|187928210|ref|YP_001898697.1| translation initiation factor IF-2 [Ralstonia pickettii 12J]
gi|238691807|sp|B2UAA3.1|IF2_RALPJ RecName: Full=Translation initiation factor IF-2
gi|187725100|gb|ACD26265.1| translation initiation factor IF-2 [Ralstonia pickettii 12J]
Length = 964
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/539 (64%), Positives = 446/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ + +
Sbjct: 398 MSVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAVAAKLDDPEAMLVGDVQEQ 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T+ G ITF
Sbjct: 458 TNAEAETRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETDRGVITF 517
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAI K+DK
Sbjct: 518 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAITKVDK 577
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E VIPEEYGG PF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 578 PEANPDRVKQELVAESVIPEEYGGDVPFVPVSAKTGEGIDSLLENVLLQAEVLELKAPVN 637
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK +AGP
Sbjct: 638 APAKGLVVEAQLDKGKGPIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKDAGP 697
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K ENM ++
Sbjct: 698 SIPVEIQGLSEVPGAGEEVLVLPDERKAREIALFRQGKFRDVKLARQQAAKLENMLEQMS 757
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ VK+L +IIK DV GS+E L SLK LSTD+V++Q++H AVG I ESD+NLA ASKA+
Sbjct: 758 EGDVKSLPLIIKADVQGSQEALVHSLKKLSTDEVRVQIVHAAVGGITESDVNLATASKAV 817
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ + I+IRY+NIIY+ + E+K+ ++ ++ EK+E GL E+RQ
Sbjct: 818 IIGFNTRADAGARKLAENHGIDIRYYNIIYDAVDEVKAAMSGMLSPEKREETTGLVEVRQ 877
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G ++R+S +R+LR +I++GELDSLKRFKD+VKEVK GFEC
Sbjct: 878 VFHVPKVGAVAGCMVLDGFVKRNSLVRVLRANVVIFSGELDSLKRFKDDVKEVKQGFEC 936
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 471 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETDRGVITF------------ 517
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V + K
Sbjct: 518 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAITK 574
Query: 1047 IDRSNARPEWV 1057
+D+ A P+ V
Sbjct: 575 VDKPEANPDRV 585
>gi|167570128|ref|ZP_02363002.1| translation initiation factor IF-2 [Burkholderia oklahomensis
C6786]
Length = 956
Score = 757 bits (1954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/539 (65%), Positives = 450/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E +
Sbjct: 391 MAVKASEVIKVMMKLGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGETS 449
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 450 SDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 509
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 510 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 569
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTGVGI+ LLEN+ LQAE+LELKAPV
Sbjct: 570 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGVGIDDLLENVLLQAEVLELKAPVD 629
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 630 APAKGIVIEAKLDKGKGPVATVLVQSGTLNRGDVVLAGSAYGRVRAMLDENGKPTKEAGP 689
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 690 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 749
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 750 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 809
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 810 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 869
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 870 VFKVPKVGAVAGCMVTDGVVKRTSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 928
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + +E RG+ F
Sbjct: 463 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 509
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 510 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 566
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 567 IDKPEANPDRV 577
>gi|78066111|ref|YP_368880.1| translation initiation factor IF-2 [Burkholderia sp. 383]
gi|90101350|sp|Q39H30.1|IF2_BURS3 RecName: Full=Translation initiation factor IF-2
gi|77966856|gb|ABB08236.1| bacterial translation initiation factor 2 (bIF-2) [Burkholderia sp.
383]
Length = 972
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 407 MSVKASEVIKVMMKMGQMVTINQVLDQETAMIIVEELGHRAVAAKLDDPEALLV-EGETG 465
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 466 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVDTPRGVITF 525
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 526 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 585
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D NLDR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 586 PDANLDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 645
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+Q+GTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 646 APAKGIVIEAKLDKGKGPVATILVQAGTLNRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 705
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 706 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 765
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 766 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 825
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 826 IIGFNTRADAQARKLAESNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 885
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 886 VFKVPKIGAVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 944
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + ++ RG+ F
Sbjct: 479 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVDTPRGVITF------------ 525
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 526 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 582
Query: 1047 IDRSNA 1052
ID+ +A
Sbjct: 583 IDKPDA 588
>gi|53719532|ref|YP_108518.1| translation initiation factor IF-2 [Burkholderia pseudomallei
K96243]
gi|76809278|ref|YP_333314.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1710b]
gi|126440596|ref|YP_001058779.1| translation initiation factor IF-2 [Burkholderia pseudomallei 668]
gi|134282196|ref|ZP_01768901.1| translation initiation factor IF-2 [Burkholderia pseudomallei 305]
gi|226199699|ref|ZP_03795252.1| translation initiation factor IF-2 [Burkholderia pseudomallei
Pakistan 9]
gi|237812042|ref|YP_002896493.1| translation initiation factor IF-2 [Burkholderia pseudomallei
MSHR346]
gi|254188608|ref|ZP_04895119.1| translation initiation factor IF-2 [Burkholderia pseudomallei
Pasteur 52237]
gi|254260255|ref|ZP_04951309.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1710a]
gi|418387511|ref|ZP_12967370.1| translation initiation factor IF-2 [Burkholderia pseudomallei 354a]
gi|418553562|ref|ZP_13118382.1| translation initiation factor IF-2 [Burkholderia pseudomallei 354e]
gi|81824731|sp|Q63TP8.1|IF2_BURPS RecName: Full=Translation initiation factor IF-2
gi|90101349|sp|Q3JSY9.1|IF2_BURP1 RecName: Full=Translation initiation factor IF-2
gi|166226258|sp|A3N8V8.1|IF2_BURP6 RecName: Full=Translation initiation factor IF-2
gi|52209946|emb|CAH35918.1| translation initiation factor IF-2 [Burkholderia pseudomallei
K96243]
gi|76578731|gb|ABA48206.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1710b]
gi|126220089|gb|ABN83595.1| translation initiation factor IF-2 [Burkholderia pseudomallei 668]
gi|134246234|gb|EBA46323.1| translation initiation factor IF-2 [Burkholderia pseudomallei 305]
gi|157936287|gb|EDO91957.1| translation initiation factor IF-2 [Burkholderia pseudomallei
Pasteur 52237]
gi|225928285|gb|EEH24319.1| translation initiation factor IF-2 [Burkholderia pseudomallei
Pakistan 9]
gi|237506535|gb|ACQ98853.1| translation initiation factor IF-2 [Burkholderia pseudomallei
MSHR346]
gi|254218944|gb|EET08328.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1710a]
gi|385371471|gb|EIF76647.1| translation initiation factor IF-2 [Burkholderia pseudomallei 354e]
gi|385376283|gb|EIF80978.1| translation initiation factor IF-2 [Burkholderia pseudomallei 354a]
Length = 975
Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 410 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 468
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 469 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 528
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 529 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 588
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 589 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 648
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 649 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 708
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 709 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 768
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 769 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 828
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 829 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 888
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 889 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 947
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 482 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 528
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 529 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 585
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 586 IDKPEANPDRV 596
>gi|217423571|ref|ZP_03455072.1| translation initiation factor IF-2 [Burkholderia pseudomallei 576]
gi|386861952|ref|YP_006274901.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1026b]
gi|418534098|ref|ZP_13099947.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1026a]
gi|418541141|ref|ZP_13106639.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1258a]
gi|418547381|ref|ZP_13112541.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1258b]
gi|217393429|gb|EEC33450.1| translation initiation factor IF-2 [Burkholderia pseudomallei 576]
gi|385358901|gb|EIF64882.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1258a]
gi|385359957|gb|EIF65903.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1026a]
gi|385361596|gb|EIF67480.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1258b]
gi|385659080|gb|AFI66503.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1026b]
Length = 975
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 410 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 468
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 469 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 528
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 529 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 588
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 589 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 648
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 649 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 708
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 709 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 768
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 769 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 828
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 829 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 888
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 889 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 947
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 482 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 528
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 529 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 585
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 586 IDKPEANPDRV 596
>gi|344198774|ref|YP_004783100.1| GTP-binding protein TypA [Acidithiobacillus ferrivorans SS3]
gi|343774218|gb|AEM46774.1| GTP-binding protein TypA [Acidithiobacillus ferrivorans SS3]
Length = 605
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/596 (60%), Positives = 456/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +Q + R+MDSN++EKERGITI +KN ++++ T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNDLEKERGITIMAKNTAVQWGDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFG EVER+L MVD VLLL+DAVEGPMPQTRFVTRKAL+LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V+ ATFDLFDKL ATE+QLDFPVIY S L GYA E+ + R G+M PLFE
Sbjct: 129 KVDRPGARADYVISATFDLFDKLGATEDQLDFPVIYASGLQGYAGEDPEVRSGDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL +V + + PLQ+QI L+YS+Y+G+I +GRI G I+ QD+V+++G D
Sbjct: 189 MILSHVAAPEGDPEGPLQMQIADLDYSNYVGRIAVGRIRRGTIRPGQDIVLIHGVDKTQT 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+I Q+ F GL RV A GDIV +TGIEE IG+TI P P LP IDEPTL
Sbjct: 249 KARILQLLGFDGLKRVPWESATVGDIVAVTGIEEPSIGATIAAPEAPEALPWKPIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AGREGKF+T+RQ++ RL E+ N+ LRV + D ++ VSGRGELHL
Sbjct: 309 NMTFQVNTSPFAGREGKFVTSRQLRERLYRELLINVALRVEDTDNAD-VFMVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYEL+VSRPRVI + +NG EPYE L VD+EE +QG IM++L R G+L
Sbjct: 368 TILIENMRREGYELAVSRPRVIQRQVNGVWEEPYEALTVDVEEQHQGTIMERLGIRRGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + + RVRLEY+IP+RGLIGF EF+T T GTG+ISH+FE Y P K + R
Sbjct: 428 QDMMPDGRGRVRLEYKIPARGLIGFHTEFLTATSGTGVISHIFEGYGPV----KGTIPAR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS G+ V ++L+ LQDRGR+F++ D VY+GM+IGIH+RDNDL+VNP+KEK+L
Sbjct: 484 NNGVLISAEEGEVVGFALFNLQDRGRMFVSPGDKVYQGMVIGIHTRDNDLVVNPLKEKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSDE I L PI++TLE A+EFI DDELVE TP++IR+RKR+L ENERK+
Sbjct: 544 TNMRASGSDENIMLTPPIRLTLEGAVEFIADDELVEATPQSIRIRKRYLTENERKR 599
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + F+ + GIT I A N
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNDLEKERGIT--IMAKNTAVQW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
G I +DTPGH F A R + D V+L+V A +G MPQTR A G+ IV
Sbjct: 66 GDTHINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIV 125
Query: 174 AINKIDKLDINLDRI 188
INK+D+ D +
Sbjct: 126 VINKVDRPGARADYV 140
>gi|126455003|ref|YP_001066031.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1106a]
gi|242316090|ref|ZP_04815106.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1106b]
gi|403518464|ref|YP_006652597.1| translation initiation factor IF-2 [Burkholderia pseudomallei
BPC006]
gi|166226257|sp|A3NUL0.1|IF2_BURP0 RecName: Full=Translation initiation factor IF-2
gi|126228645|gb|ABN92185.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1106a]
gi|242139329|gb|EES25731.1| translation initiation factor IF-2 [Burkholderia pseudomallei
1106b]
gi|403074106|gb|AFR15686.1| translation initiation factor IF-2 [Burkholderia pseudomallei
BPC006]
Length = 975
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 410 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 468
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 469 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 528
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 529 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 588
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 589 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 648
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 649 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 708
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 709 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 768
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 769 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 828
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 829 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 888
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 889 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 947
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 482 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 528
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 529 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 585
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 586 IDKPEANPDRV 596
>gi|398803487|ref|ZP_10562548.1| GTP-binding protein TypA/BipA [Polaromonas sp. CF318]
gi|398096502|gb|EJL86825.1| GTP-binding protein TypA/BipA [Polaromonas sp. CF318]
Length = 608
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/600 (61%), Positives = 465/600 (77%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWEGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E Q +M
Sbjct: 130 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGPPNEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP K + PLQLQI +L++S+++G+IG+GRI G IK + DVV+ GPD
Sbjct: 190 ALFNTILKHVPSQKGDPAAPLQLQISALDFSTFVGRIGVGRISQGTIKPMMDVVVTEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K +INQ+ F+GL+RV EA G+IVLI GI +I IG TI DP P LPML +D
Sbjct: 250 GKAIKGRINQVLTFQGLERVQATEAGPGEIVLINGIADIGIGVTITDPVNPAPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV + ++ I+EV GRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQHNVALRVKETD-EEGIFEVMGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK +NGE +EP E + DIE+ +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGYELAVSKPRVVFKDVNGEKHEPIELVTADIEDQHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K D
Sbjct: 429 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGD 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVRANDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI+ TLEY +EFI DDELVEITPK+IRLRKR LKE++RK+
Sbjct: 545 TKQLTNFRVSGKEDAIKITPPIECTLEYGVEFIEDDELVEITPKSIRLRKRHLKESDRKR 604
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWEG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 128
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 129 NKVDKPGANPDKV 141
>gi|198284448|ref|YP_002220769.1| GTP-binding protein TypA [Acidithiobacillus ferrooxidans ATCC 53993]
gi|198248969|gb|ACH84562.1| GTP-binding protein TypA [Acidithiobacillus ferrooxidans ATCC 53993]
Length = 632
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/596 (60%), Positives = 455/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +Q + R+MDSN++EKERGITI +KN ++++ T
Sbjct: 36 AIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNDLEKERGITIMAKNTAVQWGDT 95
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFG EVER+L MVD VLLL+DAVEGPMPQTRFVTRKAL+LG KPIVV+N
Sbjct: 96 HINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIVVIN 155
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V+ AT DLFDKL ATEEQLDFPVIY S L GYA E+ + R G+M PLFE
Sbjct: 156 KVDRPGARADYVISATLDLFDKLGATEEQLDFPVIYASGLQGYAGEDPEVRSGDMKPLFE 215
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL V + + PLQ+QI L+YSSY+G+I +GRI G ++ QD+V+++G D
Sbjct: 216 MILDKVAAPQGDPEGPLQMQIADLDYSSYVGRIAVGRIRRGTMRPGQDIVLIHGVDKTQT 275
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+I Q+ F GL RV A GDIV +TGIE+ IG+TI P P+ LP IDEPTL
Sbjct: 276 KARILQLLGFDGLKRVPWESATVGDIVAVTGIEDPSIGATIAAPEAPDALPWKPIDEPTL 335
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AGREGKF+T+RQ++ RL E+ N+ LRV + D ++ VSGRGELHL
Sbjct: 336 NMTFQVNTSPFAGREGKFVTSRQLRERLYRELLTNVALRVEDTDNAD-VFMVSGRGELHL 394
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRVI + ++G EPYE L +D+EE +QG IM++L R G+L
Sbjct: 395 TILVENMRREGYELAVSRPRVIQRQVDGVWEEPYEALTIDLEEQHQGTIMERLGIRRGEL 454
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + + RVRLEYRIP+RGLIGF EF+T T GTG+ISH+F+ Y P K + R
Sbjct: 455 QDMIPDGRGRVRLEYRIPARGLIGFHTEFLTATSGTGVISHIFDNYGPV----KGSIPSR 510
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS G+ V ++L+ LQ+RGR+F++ D VYEGM+IGIH+RDNDL+VNP+KEK+L
Sbjct: 511 NNGVLISAEEGEVVGFALFNLQERGRMFVSPGDKVYEGMVIGIHTRDNDLVVNPLKEKKL 570
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSDE I L PIK+TLE A+EFI DDELVE TP++IR+RKR+L ENERKK
Sbjct: 571 TNMRASGSDENIMLTPPIKLTLEAAVEFIADDELVEATPQSIRIRKRYLTENERKK 626
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 43 ASKLNDPESFLLNEYNKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFS----- 97
A+ L P FL++ + I+ +R + I+ HVDHGKT+L+D + + + F+
Sbjct: 9 AAGLVVPAFFLMSVF-WGISVARQIRN--IAIIAHVDHGKTTLVDQLLRQSGTFAAHQQL 65
Query: 98 -----------EAGGITQHIGAYNVVTNHGS--ITFLDTPGHEAFTAMRARGAKVTDIVV 144
+ GIT I A N G I +DTPGH F A R + D V+
Sbjct: 66 EERVMDSNDLEKERGIT--IMAKNTAVQWGDTHINIVDTPGHADFGAEVERVLGMVDGVL 123
Query: 145 LVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRI 188
L+V A +G MPQTR A G+ IV INK+D+ D +
Sbjct: 124 LLVDAVEGPMPQTRFVTRKALELGLKPIVVINKVDRPGARADYV 167
>gi|333915364|ref|YP_004489096.1| GTP-binding protein TypA [Delftia sp. Cs1-4]
gi|333745564|gb|AEF90741.1| GTP-binding protein TypA [Delftia sp. Cs1-4]
Length = 617
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/600 (60%), Positives = 468/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IE+ERGITI +KNC++ +N T
Sbjct: 18 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWNET 77
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPI+VVN
Sbjct: 78 HINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVVN 137
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ ARP++VV+A FDLFDKL AT+EQLDFPV+Y S ++G+ + E + Q +M
Sbjct: 138 KVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVYASGINGWTSLEEGAPGEQWGPDMS 197
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ ILK+VP K + PLQ+QI +L+YS+++G+IG+GRI SG +K DV++M GPD
Sbjct: 198 ALFDTILKHVPAVKGDPAAPLQMQISALDYSTFVGRIGVGRITSGTLKPSTDVLVMEGPD 257
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K +INQ+ F+G+DRV V EA DIVL+ GI ++ +G T+ DP P LPML ID
Sbjct: 258 GKSYKGRINQVLKFQGIDRVQVTEAGPSDIVLVNGIADLGMGVTLTDPLNPQPLPMLKID 317
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + +D I+EVSGRG
Sbjct: 318 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELRSNVALRVKETD-EDGIFEVSGRG 376
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+E MRREGYEL+VS+PRV+++ ++G +EP E + DIEE +QG +MQ L R
Sbjct: 377 ELHLTILLEEMRREGYELAVSKPRVVYRDVDGVRHEPIELVTADIEEGHQGGVMQALGER 436
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K +
Sbjct: 437 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGE 492
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMIIGIHSRDNDL+VN +
Sbjct: 493 IGGRKNGVLISMDEGEIFTYALGKLDDRGRMFVKANDPVYEGMIIGIHSRDNDLVVNATR 552
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI ++LEYA+EFI DDELVEITPK+IR+RKR L ENERK+
Sbjct: 553 TKQLTNFRVSGKEDAIKITPPIDLSLEYAVEFIEDDELVEITPKSIRVRKRHLSENERKR 612
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 49/285 (17%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSE----------------AGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+++D + + + F+E GIT V N
Sbjct: 17 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWNE 76
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I LDTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 77 THINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVV 136
Query: 176 NKIDKLDINLDRI---------KQDLISEQV-IPEEYG-GASPFISI-----SAKTGVGI 219
NK+DK D + K EQ+ P Y G + + S+ + G +
Sbjct: 137 NKVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVYASGINGWTSLEEGAPGEQWGPDM 196
Query: 220 NKLLENISLQAEILELKAPVTTPAKGVIIE-SRLDKGK--GPVATVLIQSGTLRCS-DIV 275
+ L + I + + A PA + ++ S LD G + I SGTL+ S D++
Sbjct: 197 SALFDTI-----LKHVPAVKGDPAAPLQMQISALDYSTFVGRIGVGRITSGTLKPSTDVL 251
Query: 276 VA----GASY-GRIRSMLNENGKN---ILEAGPSIPVEIQGLTKV 312
V G SY GRI +L G + + EAGPS V + G+ +
Sbjct: 252 VMEGPDGKSYKGRINQVLKFQGIDRVQVTEAGPSDIVLVNGIADL 296
>gi|160898434|ref|YP_001564016.1| GTP-binding protein TypA [Delftia acidovorans SPH-1]
gi|160364018|gb|ABX35631.1| GTP-binding protein TypA [Delftia acidovorans SPH-1]
Length = 608
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/600 (60%), Positives = 468/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IE+ERGITI +KNC++ +N T
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWNET 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPI+VVN
Sbjct: 69 HINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ ARP++VV+A FDLFDKL AT+EQLDFPV+Y S ++G+ + E + Q +M
Sbjct: 129 KVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVYASGINGWTSLEEGAPGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ ILK+VP K + PLQ+QI +L+YS+++G+IG+GRI SG +K DV++M GPD
Sbjct: 189 ALFDTILKHVPAVKGDPAAPLQMQISALDYSTFVGRIGVGRITSGTLKPSTDVLVMEGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K +INQ+ F+G+DRV V EA DIVL+ GI ++ +G T+ DP P LPML ID
Sbjct: 249 GKSYKGRINQVLKFQGIDRVQVTEAGPSDIVLVNGIADLGMGVTLTDPLNPRPLPMLKID 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + +D I+EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELRSNVALRVKETD-EDGIFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+E MRREGYEL+VS+PRV+++ ++G +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLEEMRREGYELAVSKPRVVYRDVDGVRHEPIELVTADIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K +
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGE 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMIIGIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDEGEIFTYALGKLDDRGRMFVKANDPVYEGMIIGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI ++LEYA+EFI DDELVEITPK+IR+RKR L ENERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDLSLEYAVEFIEDDELVEITPKSIRVRKRHLSENERKR 603
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 125/285 (43%), Gaps = 49/285 (17%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSE----------------AGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+++D + + + F+E GIT V N
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWNE 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I LDTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 68 THINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVV 127
Query: 176 NKIDKLDINLDRI---------KQDLISEQV-IPEEYG-GASPFISI-----SAKTGVGI 219
NK+DK D + K EQ+ P Y G + + S+ + G +
Sbjct: 128 NKVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVYASGINGWTSLEEGAPGEQWGPDM 187
Query: 220 NKLLENISLQAEILELKAPVTTPAKGVIIE-SRLDKGK--GPVATVLIQSGTLRCS-DIV 275
+ L + I + + A PA + ++ S LD G + I SGTL+ S D++
Sbjct: 188 SALFDTI-----LKHVPAVKGDPAAPLQMQISALDYSTFVGRIGVGRITSGTLKPSTDVL 242
Query: 276 VA----GASY-GRIRSMLNENGKN---ILEAGPSIPVEIQGLTKV 312
V G SY GRI +L G + + EAGPS V + G+ +
Sbjct: 243 VMEGPDGKSYKGRINQVLKFQGIDRVQVTEAGPSDIVLVNGIADL 287
>gi|167836821|ref|ZP_02463704.1| translation initiation factor IF-2 [Burkholderia thailandensis
MSMB43]
Length = 954
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 389 MAIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEVG 447
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 448 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 507
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 508 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 567
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI++LLEN+ LQAE+LELKAPV
Sbjct: 568 PDANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDELLENVLLQAEVLELKAPVD 627
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 628 SPAKGIVIEAKLDKGKGPVATVLVQSGTLNRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 687
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 688 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 747
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LST +V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 748 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTSEVRVQIVHSAVGGISESDVNLATASKAV 807
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 808 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 867
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 868 VFKVPKVGAVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 926
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 461 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 507
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 508 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 564
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 565 IDKPDANPDRV 575
>gi|377821074|ref|YP_004977445.1| translation initiation factor IF-2 [Burkholderia sp. YI23]
gi|357935909|gb|AET89468.1| translation initiation factor IF-2 [Burkholderia sp. YI23]
Length = 982
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 446/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+
Sbjct: 416 MSVKASEVIKVMMKLGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLIEGEATE 475
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
TAE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 476 DTAEKLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 535
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 536 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 595
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+SLQAE++EL APV
Sbjct: 596 PDANPDRVKQELVAEGVVPEEYGGDSPFLEVSAKTGKGIDDLLENVSLQAEVMELTAPVE 655
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK+ AGP
Sbjct: 656 AAAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKSTKSAGP 715
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 716 SIPVEIQGLSEVPAAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLENMLEQMG 775
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +I+K DV GS+E L +SL+ LST++V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 776 EGEVQNLPLIVKADVQGSQEALVQSLQKLSTNEVRVQIVHSAVGAISESDVNLATASKAV 835
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RK+A+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G E+RQ
Sbjct: 836 IIGFNTRADAQARKVAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKRETVTGTVEVRQ 895
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V KV IAGC + +G+++R S +R++RN +I TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 896 VIRVPKVGLIAGCMVTDGVVKRSSSVRVIRNNVVIHTGELDSLKRFKDDVKEVRQGFEC 954
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 489 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 535
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 536 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 592
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 593 IDKPDANPDRV 603
>gi|53724825|ref|YP_102760.1| translation initiation factor IF-2 [Burkholderia mallei ATCC 23344]
gi|121599362|ref|YP_992837.1| translation initiation factor IF-2 [Burkholderia mallei SAVP1]
gi|124385783|ref|YP_001026180.1| translation initiation factor IF-2 [Burkholderia mallei NCTC 10229]
gi|126450786|ref|YP_001080550.1| translation initiation factor IF-2 [Burkholderia mallei NCTC 10247]
gi|238562583|ref|ZP_00440121.2| translation initiation factor IF-2 [Burkholderia mallei GB8 horse
4]
gi|251768277|ref|ZP_02270110.2| translation initiation factor IF-2 [Burkholderia mallei PRL-20]
gi|254199709|ref|ZP_04906075.1| translation initiation factor IF-2 [Burkholderia mallei FMH]
gi|254358404|ref|ZP_04974677.1| translation initiation factor IF-2 [Burkholderia mallei 2002721280]
gi|81824031|sp|Q62KK9.1|IF2_BURMA RecName: Full=Translation initiation factor IF-2
gi|166226254|sp|A3MJW4.1|IF2_BURM7 RecName: Full=Translation initiation factor IF-2
gi|166226255|sp|A2S2L1.1|IF2_BURM9 RecName: Full=Translation initiation factor IF-2
gi|166226256|sp|A1V3N4.1|IF2_BURMS RecName: Full=Translation initiation factor IF-2
gi|52428248|gb|AAU48841.1| translation initiation factor IF-2 [Burkholderia mallei ATCC 23344]
gi|121228172|gb|ABM50690.1| translation initiation factor IF-2 [Burkholderia mallei SAVP1]
gi|124293803|gb|ABN03072.1| translation initiation factor IF-2 [Burkholderia mallei NCTC 10229]
gi|126243656|gb|ABO06749.1| translation initiation factor IF-2 [Burkholderia mallei NCTC 10247]
gi|147749305|gb|EDK56379.1| translation initiation factor IF-2 [Burkholderia mallei FMH]
gi|148027531|gb|EDK85552.1| translation initiation factor IF-2 [Burkholderia mallei 2002721280]
gi|238522258|gb|EEP85703.1| translation initiation factor IF-2 [Burkholderia mallei GB8 horse
4]
gi|243060320|gb|EES42506.1| translation initiation factor IF-2 [Burkholderia mallei PRL-20]
Length = 975
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 410 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 468
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 469 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 528
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 529 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 588
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 589 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 648
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 649 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 708
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +G+E+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 709 SIPVEIQGLSEVPGAGDEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 768
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 769 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 828
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 829 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 888
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 889 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 947
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 482 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 528
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 529 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 585
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 586 IDKPEANPDRV 596
>gi|121604909|ref|YP_982238.1| GTP-binding protein TypA [Polaromonas naphthalenivorans CJ2]
gi|120593878|gb|ABM37317.1| GTP-binding protein TypA [Polaromonas naphthalenivorans CJ2]
Length = 607
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/600 (60%), Positives = 468/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF ++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVTWEGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ V++ATFDLFDKL AT+EQLDFPV+Y S ++G+++ E ++ Q +M
Sbjct: 130 KVDKPGANPDKVINATFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAQGEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF +LK+VP K + PLQLQI +L++S+++G+IG+GRI G I+ + DVV+M GPD
Sbjct: 190 ALFNTVLKHVPAQKGDPEAPLQLQISALDFSTFVGRIGVGRISQGTIRPMMDVVVMEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K +INQ+ F+GL+RV EA G+IVLI G+ +I IG TI DP+ P LPML +D
Sbjct: 250 GKAVKGRINQVLTFQGLERVQATEAGPGEIVLINGLTDIGIGVTITDPANPMPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV + ++ I+EV GRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQHNVALRVNETD-EEGIFEVMGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREG+E++VS+PRV+ K +NG +EP E + DIEE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGFEMAVSKPRVLLKDVNGVKHEPIELVTADIEEQHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLI+++F+ Y P K D
Sbjct: 429 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLIANIFDCYEPH----KGD 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS +G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IGGRKNGVLISMDAGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI+ TLEY +EFI DDELVEITPK+IRLRKR+L E+ERK+
Sbjct: 545 TKQLTNFRVSGKEDAIKITPPIECTLEYGVEFIEDDELVEITPKSIRLRKRYLTESERKR 604
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F++ + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVTWEG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 128
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 129 NKVDKPGANPDKV 141
>gi|424904190|ref|ZP_18327700.1| translation initiation factor IF-2 [Burkholderia thailandensis
MSMB43]
gi|390930168|gb|EIP87570.1| translation initiation factor IF-2 [Burkholderia thailandensis
MSMB43]
Length = 958
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 393 MAIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEVG 451
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 452 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 511
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 512 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 571
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI++LLEN+ LQAE+LELKAPV
Sbjct: 572 PDANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDELLENVLLQAEVLELKAPVD 631
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 632 SPAKGIVIEAKLDKGKGPVATVLVQSGTLNRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 691
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 692 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 751
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LST +V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 752 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTSEVRVQIVHSAVGGISESDVNLATASKAV 811
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 812 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 871
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 872 VFKVPKVGAVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 930
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 465 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 511
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 512 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 568
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 569 IDKPDANPDRV 579
>gi|167719817|ref|ZP_02403053.1| translation initiation factor IF-2 [Burkholderia pseudomallei DM98]
Length = 778
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 213 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 271
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 272 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 331
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 332 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 391
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 392 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 451
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 452 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 511
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 512 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 571
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 572 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 631
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 632 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 691
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 692 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 750
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 285 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 331
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 332 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 388
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 389 IDKPEANPDRV 399
>gi|83718907|ref|YP_443081.1| translation initiation factor IF-2 [Burkholderia thailandensis
E264]
gi|123767619|sp|Q2SVG8.1|IF2_BURTA RecName: Full=Translation initiation factor IF-2
gi|83652732|gb|ABC36795.1| translation initiation factor IF-2 [Burkholderia thailandensis
E264]
Length = 976
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 449/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 411 MAIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 469
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 470 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 529
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 530 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 589
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTGVGI+ LLEN+ LQAE+LELKAPV
Sbjct: 590 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGVGIDDLLENVLLQAEVLELKAPVE 649
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 650 SPAKGIVIEAKLDKGKGPVATVLVQSGTLNRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 709
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 710 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 769
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LST++V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 770 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTNEVRVQIVHSAVGGISESDVNLATASKAV 829
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 830 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 889
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 890 VFKVPKVGAVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 948
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 483 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 529
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 530 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 586
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 587 IDKPEANPDRV 597
>gi|326316669|ref|YP_004234341.1| GTP-binding protein TypA [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373505|gb|ADX45774.1| GTP-binding protein TypA [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 608
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/600 (60%), Positives = 466/600 (77%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF ++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD+V+LLIDA EGPMPQTRFVT+KAL LG +PI+VVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 129 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP + + PLQLQI +L++S+++G+IG+GRI G +K QDV++M GPD
Sbjct: 189 ALFNTILKHVPPNSGDPAAPLQLQISALDFSTFVGRIGVGRISQGTLKPGQDVLVMEGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDR+ A GDIVLI GIE+I IG T+ DP+ P LPML +D
Sbjct: 249 GKSVKGRVNQVLTFQGLDRMQTPLAGPGDIVLINGIEDIGIGVTVTDPANPAPLPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQ+ +RL E+++N+ LRV + ++ I+EV GRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQLWDRLQKELQHNVALRVKETD-EEGIFEVMGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK ++G +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVFKDIDGVKHEPIELVTADIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K D
Sbjct: 428 KGELVNMESDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI +TLEY +EFI DDELVEITPK+IRLRKR L ENERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSIRLRKRHLTENERKR 603
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F++ + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|107022574|ref|YP_620901.1| translation initiation factor IF-2 [Burkholderia cenocepacia AU
1054]
gi|116689522|ref|YP_835145.1| translation initiation factor IF-2 [Burkholderia cenocepacia
HI2424]
gi|123245043|sp|Q1BWS7.1|IF2_BURCA RecName: Full=Translation initiation factor IF-2
gi|166226253|sp|A0K6X5.1|IF2_BURCH RecName: Full=Translation initiation factor IF-2
gi|105892763|gb|ABF75928.1| bacterial translation initiation factor 2 (bIF-2) [Burkholderia
cenocepacia AU 1054]
gi|116647611|gb|ABK08252.1| bacterial translation initiation factor 2 (bIF-2) [Burkholderia
cenocepacia HI2424]
Length = 971
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 447/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 406 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIIVEELGHRAVAAKLDDPEALLV-EGESG 464
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 465 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVDTPRGVITF 524
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 525 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 584
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 585 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 644
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 645 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 704
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 705 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 764
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 765 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 824
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 825 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 884
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 885 VFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 943
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + ++ RG+ F
Sbjct: 478 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVDTPRGVITF------------ 524
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 525 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 581
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 582 IDKPEANPDRV 592
>gi|218665904|ref|YP_002427115.1| GTP-binding protein TypA [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218518117|gb|ACK78703.1| GTP-binding protein TypA [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 605
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/596 (60%), Positives = 455/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +Q + R+MDSN++EKERGITI +KN ++++ T
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNDLEKERGITIMAKNTAVQWGDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFG EVER+L MVD VLLL+DAVEGPMPQTRFVTRKAL+LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V+ AT DLFDKL ATEEQLDFPVIY S L GYA E+ + R G+M PLFE
Sbjct: 129 KVDRPGARADYVISATLDLFDKLGATEEQLDFPVIYASGLQGYAGEDPEVRSGDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL V + + PLQ+QI L+YSSY+G+I +GRI G ++ QD+V+++G D
Sbjct: 189 MILDKVAAPQGDPEGPLQMQIADLDYSSYVGRIAVGRIRRGTMRPGQDIVLIHGVDKTQT 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+I Q+ F GL RV A GDIV +TGIE+ IG+TI P P+ LP IDEPTL
Sbjct: 249 KARILQLLGFDGLKRVPWESATVGDIVAVTGIEDPSIGATIAAPEAPDALPWKPIDEPTL 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AGREGKF+T+RQ++ RL E+ N+ LRV + D ++ VSGRGELHL
Sbjct: 309 NMTFQVNTSPFAGREGKFVTSRQLRERLYRELLTNVALRVEDTDNAD-VFMVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRVI + ++G EPYE L +D+EE +QG IM++L R G+L
Sbjct: 368 TILVENMRREGYELAVSRPRVIQRQVDGVWEEPYEALTIDLEEQHQGTIMERLGIRRGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + + RVRLEYRIP+RGLIGF EF+T T GTG+ISH+F+ Y P K + R
Sbjct: 428 QDMIPDGRGRVRLEYRIPARGLIGFHTEFLTATSGTGVISHIFDNYGPV----KGSIPSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS G+ V ++L+ LQ+RGR+F++ D VYEGM+IGIH+RDNDL+VNP+KEK+L
Sbjct: 484 NNGVLISAEEGEVVGFALFNLQERGRMFVSPGDKVYEGMVIGIHTRDNDLVVNPLKEKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSDE I L PIK+TLE A+EFI DDELVE TP++IR+RKR+L ENERKK
Sbjct: 544 TNMRASGSDENIMLTPPIKLTLEAAVEFIADDELVEATPQSIRIRKRYLTENERKK 599
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + F+ + GIT I A N
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNDLEKERGIT--IMAKNTAVQW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
G I +DTPGH F A R + D V+L+V A +G MPQTR A G+ IV
Sbjct: 66 GDTHINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIV 125
Query: 174 AINKIDKLDINLDRI 188
INK+D+ D +
Sbjct: 126 VINKVDRPGARADYV 140
>gi|402566701|ref|YP_006616046.1| translation initiation factor 2 [Burkholderia cepacia GG4]
gi|402247898|gb|AFQ48352.1| translation initiation factor 2 [Burkholderia cepacia GG4]
Length = 973
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 408 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGETG 466
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 467 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVDTPRGVITF 526
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 527 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 586
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTGVGI+ LLEN+ LQAE+LELKAPV
Sbjct: 587 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGVGIDDLLENVLLQAEVLELKAPVE 646
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 647 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 706
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 707 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 766
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 767 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 826
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 827 IIGFNTRADAQARKLAESNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 886
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 887 VFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 945
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + ++ RG+ F
Sbjct: 480 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVDTPRGVITF------------ 526
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 527 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 583
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 584 IDKPEANPDRV 594
>gi|167582086|ref|ZP_02374960.1| translation initiation factor IF-2 [Burkholderia thailandensis
TXDOH]
gi|167620247|ref|ZP_02388878.1| translation initiation factor IF-2 [Burkholderia thailandensis Bt4]
Length = 958
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 449/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 393 MAIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 451
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 452 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 511
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 512 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 571
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTGVGI+ LLEN+ LQAE+LELKAPV
Sbjct: 572 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGVGIDDLLENVLLQAEVLELKAPVE 631
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 632 SPAKGIVIEAKLDKGKGPVATVLVQSGTLNRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 691
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 692 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 751
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LST++V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 752 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTNEVRVQIVHSAVGGISESDVNLATASKAV 811
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 812 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 871
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 872 VFKVPKVGAVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 930
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 465 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 511
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 512 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 568
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 569 IDKPEANPDRV 579
>gi|170700022|ref|ZP_02891047.1| translation initiation factor IF-2 [Burkholderia ambifaria
IOP40-10]
gi|170135081|gb|EDT03384.1| translation initiation factor IF-2 [Burkholderia ambifaria
IOP40-10]
Length = 973
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 449/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 408 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGETT 466
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 467 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 526
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 527 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 586
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTGVGI+ LLEN+ LQAE+LELKAP+
Sbjct: 587 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGVGIDDLLENVLLQAEVLELKAPIE 646
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 647 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDENGKPTKEAGP 706
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 707 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 766
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 767 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 826
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 827 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 886
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 887 VFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 945
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + +E RG+ F
Sbjct: 480 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 526
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 527 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 583
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 584 IDKPEANPDRV 594
>gi|421865346|ref|ZP_16297026.1| translation initiation factor 2 [Burkholderia cenocepacia H111]
gi|358074809|emb|CCE47904.1| translation initiation factor 2 [Burkholderia cenocepacia H111]
Length = 971
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 447/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 406 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIIVEELGHRAVAAKLDDPEALLV-EGETG 464
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 465 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVDTPRGVITF 524
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 525 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 584
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 585 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 644
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 645 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 704
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 705 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 764
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 765 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 824
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 825 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 884
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 885 VFKVPKVGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 943
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + ++ RG+ F
Sbjct: 478 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVDTPRGVITF------------ 524
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 525 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 581
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 582 IDKPEANPDRV 592
>gi|415963268|ref|ZP_11557871.1| GTP-binding protein TypA, partial [Acidithiobacillus sp. GGI-221]
gi|339832890|gb|EGQ60772.1| GTP-binding protein TypA [Acidithiobacillus sp. GGI-221]
Length = 601
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/596 (60%), Positives = 455/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +Q + R+MDSN++EKERGITI +KN ++++ T
Sbjct: 5 AIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNDLEKERGITIMAKNTAVQWGDT 64
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFG EVER+L MVD VLLL+DAVEGPMPQTRFVTRKAL+LG KPIVV+N
Sbjct: 65 HINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIVVIN 124
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR ++V+ AT DLFDKL ATEEQLDFPVIY S L GYA E+ + R G+M PLFE
Sbjct: 125 KVDRPGARADYVISATLDLFDKLGATEEQLDFPVIYASGLQGYAGEDPEVRSGDMKPLFE 184
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL V + + PLQ+QI L+YSSY+G+I +GRI G ++ QD+V+++G D
Sbjct: 185 MILDKVAAPQGDPEGPLQMQIADLDYSSYVGRIAVGRIRRGTMRPGQDIVLIHGVDKTQT 244
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA+I Q+ F GL RV A GDIV +TGIE+ IG+TI P P+ LP IDEPTL
Sbjct: 245 KARILQLLGFDGLKRVPWESATVGDIVAVTGIEDPSIGATIAAPEAPDALPWKPIDEPTL 304
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AGREGKF+T+RQ++ RL E+ N+ LRV + D ++ VSGRGELHL
Sbjct: 305 NMTFQVNTSPFAGREGKFVTSRQLRERLYRELLTNVALRVEDTDNAD-VFMVSGRGELHL 363
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYEL+VSRPRVI + ++G EPYE L +D+EE +QG IM++L R G+L
Sbjct: 364 TILVENMRREGYELAVSRPRVIQRQVDGVWEEPYEALTIDLEEQHQGTIMERLGIRRGEL 423
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + + RVRLEYRIP+RGLIGF EF+T T GTG+ISH+F+ Y P K + R
Sbjct: 424 QDMIPDGRGRVRLEYRIPARGLIGFHTEFLTATSGTGVISHIFDNYGPV----KGSIPSR 479
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS G+ V ++L+ LQ+RGR+F++ D VYEGM+IGIH+RDNDL+VNP+KEK+L
Sbjct: 480 NNGVLISAEEGEVVGFALFNLQERGRMFVSPGDKVYEGMVIGIHTRDNDLVVNPLKEKKL 539
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSDE I L PIK+TLE A+EFI DDELVE TP++IR+RKR+L ENERKK
Sbjct: 540 TNMRASGSDENIMLTPPIKLTLEAAVEFIADDELVEATPQSIRIRKRYLTENERKK 595
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 65/135 (48%), Gaps = 20/135 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + F+ + GIT I A N
Sbjct: 4 IAIIAHVDHGKTTLVDQLLRQSGTFAAHQQLEERVMDSNDLEKERGIT--IMAKNTAVQW 61
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
G I +DTPGH F A R + D V+L+V A +G MPQTR A G+ IV
Sbjct: 62 GDTHINIVDTPGHADFGAEVERVLGMVDGVLLLVDAVEGPMPQTRFVTRKALELGLKPIV 121
Query: 174 AINKIDKLDINLDRI 188
INK+D+ D +
Sbjct: 122 VINKVDRPGARADYV 136
>gi|115351435|ref|YP_773274.1| translation initiation factor IF-2 [Burkholderia ambifaria AMMD]
gi|122323372|sp|Q0BFY3.1|IF2_BURCM RecName: Full=Translation initiation factor IF-2
gi|115281423|gb|ABI86940.1| bacterial translation initiation factor 2 (bIF-2) [Burkholderia
ambifaria AMMD]
Length = 971
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 449/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 406 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGETT 464
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 465 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 524
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 525 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 584
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTGVGI+ LLEN+ LQAE+LELKAP+
Sbjct: 585 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGVGIDDLLENVLLQAEVLELKAPIE 644
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 645 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDENGKPTKEAGP 704
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 705 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 764
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 765 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 824
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 825 IIGFNTRADAQARKLAESNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 884
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 885 VFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 943
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + +E RG+ F
Sbjct: 478 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 524
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 525 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 581
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 582 IDKPEANPDRV 592
>gi|387902092|ref|YP_006332431.1| translation initiation factor 2 [Burkholderia sp. KJ006]
gi|387576984|gb|AFJ85700.1| Translation initiation factor 2 [Burkholderia sp. KJ006]
Length = 974
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 449/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E +
Sbjct: 409 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGETS 467
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 468 SDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 527
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 528 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 587
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 588 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 647
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG++YGR+R+ML+ENGK EAGP
Sbjct: 648 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDIVLAGSAYGRVRAMLDENGKPTKEAGP 707
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 708 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 767
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 768 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 827
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 828 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 887
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 888 VFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 946
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + +E RG+ F
Sbjct: 481 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 527
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 528 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 584
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 585 IDKPEANPDRV 595
>gi|134295574|ref|YP_001119309.1| translation initiation factor IF-2 [Burkholderia vietnamiensis G4]
gi|166226259|sp|A4JDX1.1|IF2_BURVG RecName: Full=Translation initiation factor IF-2
gi|134138731|gb|ABO54474.1| bacterial translation initiation factor 2 (bIF-2) [Burkholderia
vietnamiensis G4]
Length = 974
Score = 754 bits (1947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 449/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E +
Sbjct: 409 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGETS 467
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 468 SDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 527
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 528 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 587
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 588 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 647
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG++YGR+R+ML+ENGK EAGP
Sbjct: 648 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDIVLAGSAYGRVRAMLDENGKPTKEAGP 707
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 708 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 767
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 768 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 827
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 828 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 887
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 888 VFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 946
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + +E RG+ F
Sbjct: 481 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 527
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 528 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 584
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 585 IDKPEANPDRV 595
>gi|416981436|ref|ZP_11938060.1| translation initiation factor IF-2, partial [Burkholderia sp.
TJI49]
gi|325519608|gb|EGC98957.1| translation initiation factor IF-2 [Burkholderia sp. TJI49]
Length = 597
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E +
Sbjct: 32 MSVKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGEAS 90
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 91 TDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 150
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 151 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 210
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 211 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 270
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 271 APAKGIVIEAKLDKGKGPVATMLVQSGTLSRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 330
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 331 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 390
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 391 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 450
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 451 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 510
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 511 VFKVPKVGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 569
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 104 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 150
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 151 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 207
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 208 IDKPEANPDRV 218
>gi|91788294|ref|YP_549246.1| GTP-binding protein TypA [Polaromonas sp. JS666]
gi|91697519|gb|ABE44348.1| GTP-binding protein TypA [Polaromonas sp. JS666]
Length = 607
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/600 (60%), Positives = 469/600 (78%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 10 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWEGT 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG KPI+VVN
Sbjct: 70 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ ARP++VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E Q +M
Sbjct: 130 KVDKPGARPDYVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGPPNEQWGPDMS 189
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP + + PLQLQI +L++S+++G+IG+GRI G IK + DVV+M GPD
Sbjct: 190 ALFNTILKHVPHQEGDPAAPLQLQISALDFSTFVGRIGVGRISQGTIKPMMDVVVMEGPD 249
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K +INQ+ F+GL+RV +A G+IVLI G+ +I IG TI DP+ P LPML +D
Sbjct: 250 GKAVKGRINQVLTFQGLERVQATDAGPGEIVLINGLTDIGIGVTITDPANPAPLPMLKVD 309
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + ++ I+EV GRG
Sbjct: 310 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVKETD-EEGIFEVMGRG 368
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREG+EL+VS+PRV++K ++G +EP E + DIEE +QG +MQ L R
Sbjct: 369 ELHLTILLENMRREGFELAVSKPRVVYKDVDGVRHEPIELVTADIEETHQGGVMQALGER 428
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
GDL N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K +
Sbjct: 429 KGDLVNMESDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGE 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 485 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVRANDPVYEGMIVGIHSRDNDLVVNATR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++A+++ PI++TLEY +EFI +DELVEITPK++RLRKR LKE++RK+
Sbjct: 545 TKQLTNFRVSGKEDAVKITPPIELTLEYGVEFIEEDELVEITPKSVRLRKRHLKESDRKR 604
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIEKERGITILAKNCAVTWEG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 69 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLKPILVV 128
Query: 176 NKIDK 180
NK+DK
Sbjct: 129 NKVDK 133
>gi|206559873|ref|YP_002230637.1| translation initiation factor IF-2 [Burkholderia cenocepacia J2315]
gi|444364537|ref|ZP_21164850.1| translation initiation factor IF-2 [Burkholderia cenocepacia BC7]
gi|444371144|ref|ZP_21170722.1| translation initiation factor IF-2 [Burkholderia cenocepacia
K56-2Valvano]
gi|238693073|sp|B4E7L1.1|IF2_BURCJ RecName: Full=Translation initiation factor IF-2
gi|198035914|emb|CAR51806.1| translation initiation factor IF-2 [Burkholderia cenocepacia J2315]
gi|443592756|gb|ELT61536.1| translation initiation factor IF-2 [Burkholderia cenocepacia BC7]
gi|443595921|gb|ELT64462.1| translation initiation factor IF-2 [Burkholderia cenocepacia
K56-2Valvano]
Length = 971
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 447/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 406 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIIVEELGHRAVAAKLDDPEALLV-EGETG 464
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 465 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVDTPRGVITF 524
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 525 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 584
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 585 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 644
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 645 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 704
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 705 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 764
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 765 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 824
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 825 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 884
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 885 VFKVPKVGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 943
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + ++ RG+ F
Sbjct: 478 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVDTPRGVITF------------ 524
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 525 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 581
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 582 IDKPEANPDRV 592
>gi|167902929|ref|ZP_02490134.1| translation initiation factor IF-2 [Burkholderia pseudomallei NCTC
13177]
Length = 761
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 196 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 254
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 255 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 314
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 315 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 374
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 375 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 434
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 435 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 494
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 495 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 554
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 555 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 614
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 615 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 674
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 675 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 733
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 268 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 314
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 315 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 371
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 372 IDKPEANPDRV 382
>gi|170732826|ref|YP_001764773.1| translation initiation factor IF-2 [Burkholderia cenocepacia MC0-3]
gi|238688625|sp|B1K0M0.1|IF2_BURCC RecName: Full=Translation initiation factor IF-2
gi|169816068|gb|ACA90651.1| translation initiation factor IF-2 [Burkholderia cenocepacia MC0-3]
Length = 971
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 447/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 406 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIIVEELGHRAVAAKLDDPEALLV-EGESG 464
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 465 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVDTPRGVITF 524
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 525 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 584
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 585 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 644
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 645 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 704
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 705 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 764
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 765 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 824
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 825 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 884
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 885 VFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 943
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + ++ RG+ F
Sbjct: 478 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVDTPRGVITF------------ 524
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 525 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 581
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 582 IDKPEANPDRV 592
>gi|167894524|ref|ZP_02481926.1| translation initiation factor IF-2 [Burkholderia pseudomallei 7894]
Length = 652
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 87 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 145
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 146 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 205
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 206 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 265
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 266 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 325
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 326 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 385
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 386 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 445
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 446 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 505
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 506 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 565
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 566 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 624
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 159 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 205
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 206 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 262
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 263 IDKPEANPDRV 273
>gi|221197757|ref|ZP_03570803.1| translation initiation factor IF-2 [Burkholderia multivorans CGD2M]
gi|221204685|ref|ZP_03577702.1| translation initiation factor IF-2 [Burkholderia multivorans CGD2]
gi|421468641|ref|ZP_15917170.1| translation initiation factor IF-2 [Burkholderia multivorans ATCC
BAA-247]
gi|221175542|gb|EEE07972.1| translation initiation factor IF-2 [Burkholderia multivorans CGD2]
gi|221181689|gb|EEE14090.1| translation initiation factor IF-2 [Burkholderia multivorans CGD2M]
gi|400231605|gb|EJO61288.1| translation initiation factor IF-2 [Burkholderia multivorans ATCC
BAA-247]
Length = 969
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 404 MAIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGETG 462
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 463 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 522
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 523 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 582
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 583 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 642
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG++YGR+R+ML+ENGK EAGP
Sbjct: 643 APAKGIVIEAKLDKGKGPVATMLVQSGTLSRGDIVLAGSAYGRVRAMLDENGKPTKEAGP 702
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 703 SIPVEIQGLSEVPAAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 762
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 763 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 822
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 823 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 882
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 883 VFKVPKVGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 941
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 476 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 522
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 523 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 579
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 580 IDKPEANPDRV 590
>gi|167816040|ref|ZP_02447720.1| translation initiation factor IF-2 [Burkholderia pseudomallei 91]
Length = 662
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 97 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 155
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 156 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 215
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 216 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 275
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 276 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 335
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 336 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 395
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 396 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 455
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 456 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 515
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 516 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 575
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 576 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 634
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 169 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 215
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 216 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 272
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 273 IDKPEANPDRV 283
>gi|254245585|ref|ZP_04938906.1| Translation initiation factor IF-2 [Burkholderia cenocepacia PC184]
gi|124870361|gb|EAY62077.1| Translation initiation factor IF-2 [Burkholderia cenocepacia PC184]
Length = 971
Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 447/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 406 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIIVEELGHRAVAAKLDDPEALLV-EGESG 464
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 465 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVDTPRGVITF 524
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 525 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 584
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 585 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 644
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 645 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 704
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 705 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 764
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 765 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 824
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 825 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 884
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 885 VFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 943
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + ++ RG+ F
Sbjct: 478 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVDTPRGVITF------------ 524
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 525 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 581
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 582 IDKPEANPDRV 592
>gi|300704336|ref|YP_003745939.1| translation initiation factor if-2 [Ralstonia solanacearum
CFBP2957]
gi|299072000|emb|CBJ43330.1| Translation initiation factor IF-2 [Ralstonia solanacearum
CFBP2957]
Length = 966
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/539 (64%), Positives = 443/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ +
Sbjct: 400 MAVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAVAAKLDDPEALLVEGVQEQ 459
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 460 QNVEAETRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETQRGVITF 519
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 520 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 579
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E VIPEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV+
Sbjct: 580 PDANPDRVKQELVAESVIPEEYGGESPFVPVSAKTGQGIDDLLENVLLQAEVLELKAPVS 639
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 640 APAKGLVVEAQLDKGKGPIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKEAGP 699
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K E M ++
Sbjct: 700 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLARQQAAKLETMLEQMS 759
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LST +V++QV+H AVG I+ESD+NLA ASKA+
Sbjct: 760 EGEVKTLPLIIKADVQGSQEALVHALNKLSTGEVRVQVVHGAVGGISESDVNLATASKAV 819
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ I+IRY+NIIY+ + E+K+ ++ ++ EKKE G E+RQ
Sbjct: 820 IIGFNTRADAGARKLAEHQGIDIRYYNIIYDAVDEVKAAMSGMLSPEKKEETTGTVEVRQ 879
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G+++R S +R+LR+ +I++GEL+SLKRFKD+VKEVK GFEC
Sbjct: 880 VFHVPKVGAVAGCMVLDGIVKRSSLVRVLRDNVVIFSGELESLKRFKDDVKEVKQGFEC 938
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 473 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETQRGVITF------------ 519
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 520 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 576
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 577 IDKPDANPDRV 587
>gi|161524928|ref|YP_001579940.1| translation initiation factor IF-2 [Burkholderia multivorans ATCC
17616]
gi|189350322|ref|YP_001945950.1| translation initiation factor IF-2 [Burkholderia multivorans ATCC
17616]
gi|221214879|ref|ZP_03587847.1| translation initiation factor IF-2 [Burkholderia multivorans CGD1]
gi|238687004|sp|A9ABD5.1|IF2_BURM1 RecName: Full=Translation initiation factor IF-2
gi|160342357|gb|ABX15443.1| translation initiation factor IF-2 [Burkholderia multivorans ATCC
17616]
gi|189334344|dbj|BAG43414.1| translation initiation factor IF-2 [Burkholderia multivorans ATCC
17616]
gi|221165106|gb|EED97584.1| translation initiation factor IF-2 [Burkholderia multivorans CGD1]
Length = 969
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 447/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 404 MAIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGETG 462
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 463 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 522
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 523 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 582
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 583 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 642
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 643 APAKGIVIEAKLDKGKGPVATMLVQSGTLSRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 702
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 703 SIPVEIQGLSEVPAAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 762
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 763 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 822
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 823 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 882
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 883 VFKVPKVGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 941
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 476 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 522
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 523 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 579
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 580 IDKPEANPDRV 590
>gi|237748744|ref|ZP_04579224.1| translation initiation factor IF-2 [Oxalobacter formigenes OXCC13]
gi|229380106|gb|EEO30197.1| translation initiation factor IF-2 [Oxalobacter formigenes OXCC13]
Length = 980
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/539 (66%), Positives = 443/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK LMKLGQMVTINQVLDQETAMILVEEMGH A A+K+ D E+ L E N
Sbjct: 415 MAVKASEVIKQLMKLGQMVTINQVLDQETAMILVEEMGHKAFAAKIQDVEAELA-EMGDN 473
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G +TF
Sbjct: 474 ENAELLPRAPVVTVMGHVDHGKTSLLDYIRRTKVATGEAGGITQHIGAYHVKTGRGIVTF 533
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 534 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 593
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N++R+ Q+L++E VIPEEYGG PF+ +SAK+G GI+ LLEN+ LQAEILEL APV
Sbjct: 594 QGANVNRVTQELVAEDVIPEEYGGDIPFVPVSAKSGQGIDSLLENVLLQAEILELTAPVE 653
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE+RLDKG+GPVATVL+QSGTL D+V+ G YGRIR+ML+E GK I EAGP
Sbjct: 654 AMAKGLVIEARLDKGRGPVATVLVQSGTLHRGDVVLVGQEYGRIRAMLSETGKAISEAGP 713
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT VP +GEE+ V+ +E+KAREIGLFRQGKFRDVKL+KQ+ K ENMF +I
Sbjct: 714 SIPVEIQGLTGVPSAGEEIVVLNDERKAREIGLFRQGKFRDVKLAKQQAAKLENMFENIG 773
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK+L +IIKTDV GS+E L SL LS D+V++Q++H AVG I E+D+NLA+AS+A+
Sbjct: 774 EGEVKSLPLIIKTDVQGSQEALASSLLKLSNDEVRVQIVHAAVGGITETDVNLALASQAV 833
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA R A+ N ++IRY+NIIY+ I E+K+ ++ ++ EK+E+ LGL EIRQ
Sbjct: 834 IIGFNTRADAQARHQAEANGVDIRYYNIIYDAIDEVKAAMSGMLAPEKREHALGLVEIRQ 893
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V++V IAGC++ EGL+RR S + +LR+ +IW+GE+DSLKRFKD+VKEVKA FEC
Sbjct: 894 VINVSRVGAIAGCFVTEGLVRRGSPVHLLRDNVVIWSGEIDSLKRFKDDVKEVKANFEC 952
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 916 DENIYILIKSAII---AHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGIT 972
+EN +L ++ ++ HVDHGKT+L+D++ R + I I + ++ RGI
Sbjct: 473 NENAELLPRAPVVTVMGHVDHGKTSLLDYIRRTKVATGEAGGITQHI-GAYHVKTGRGIV 531
Query: 973 IFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRK 1032
F +DTPGH F R D V+L++ A +G MPQT+
Sbjct: 532 TF---------------LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAH 576
Query: 1033 ALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEE-QLDFPVIYTSALHG 1087
A G +V +NKID+ A V T +L + EE D P + SA G
Sbjct: 577 AKAAGVPIVVAINKIDKQGANVNRV---TQELVAEDVIPEEYGGDIPFVPVSAKSG 629
>gi|167824415|ref|ZP_02455886.1| translation initiation factor IF-2 [Burkholderia pseudomallei 9]
Length = 655
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 90 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 148
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 149 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 208
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 209 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 268
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 269 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 328
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 329 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 388
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 389 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 448
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 449 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 508
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 509 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 568
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 569 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 627
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 162 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 208
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 209 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 265
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 266 IDKPEANPDRV 276
>gi|172060474|ref|YP_001808126.1| translation initiation factor IF-2 [Burkholderia ambifaria MC40-6]
gi|238689139|sp|B1YP36.1|IF2_BURA4 RecName: Full=Translation initiation factor IF-2
gi|171992991|gb|ACB63910.1| translation initiation factor IF-2 [Burkholderia ambifaria MC40-6]
Length = 972
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 449/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 407 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGEAT 465
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 466 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 525
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 526 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 585
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTGVGI+ LLEN+ LQAE+LELKAP+
Sbjct: 586 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGVGIDDLLENVLLQAEVLELKAPIE 645
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 646 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDENGKPTKEAGP 705
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 706 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 765
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 766 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISENDVNLATASKAV 825
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 826 IIGFNTRADAQARKLAESNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 885
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 886 VFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 944
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + +E RG+ F
Sbjct: 479 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 525
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 526 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 582
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 583 IDKPEANPDRV 593
>gi|167845947|ref|ZP_02471455.1| translation initiation factor IF-2 [Burkholderia pseudomallei
B7210]
Length = 633
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 68 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 126
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 127 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 186
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 187 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 246
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 247 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 306
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 307 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 366
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 367 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 426
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 427 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 486
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 487 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 546
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 547 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 605
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 140 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 186
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 187 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 243
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 244 IDKPEANPDRV 254
>gi|167562938|ref|ZP_02355854.1| translation initiation factor IF-2 [Burkholderia oklahomensis
EO147]
Length = 638
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/539 (65%), Positives = 450/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E +
Sbjct: 73 MAVKASEVIKVMMKLGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGETS 131
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 132 SDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 191
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 192 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 251
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTGVGI+ LLEN+ LQAE+LELKAPV
Sbjct: 252 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGVGIDDLLENVLLQAEVLELKAPVD 311
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 312 APAKGIVIEAKLDKGKGPVATVLVQSGTLNRGDVVLAGSAYGRVRAMLDENGKPTKEAGP 371
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 372 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 431
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 432 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 491
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 492 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 551
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 552 VFKVPKVGAVAGCMVTDGVVKRTSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 610
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + +E RG+ F
Sbjct: 145 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 191
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 192 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 248
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 249 IDKPEANPDRV 259
>gi|120612034|ref|YP_971712.1| GTP-binding protein TypA [Acidovorax citrulli AAC00-1]
gi|120590498|gb|ABM33938.1| GTP-binding protein TypA [Acidovorax citrulli AAC00-1]
Length = 608
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/600 (60%), Positives = 466/600 (77%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF ++ + +MD+N IEKERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD+V+LLIDA EGPMPQTRFVT+KAL LG +PI+VVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+++ E + Q +M
Sbjct: 129 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP + + PLQLQI +L++S+++G+IG+GRI G +K QDV++M GP+
Sbjct: 189 ALFNTILKHVPPNSGDPAAPLQLQISALDFSTFVGRIGVGRISQGTLKPGQDVLVMEGPN 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K K ++NQ+ F+GLDR+ A GDIVLI GIE+I IG T+ DP+ P LPML +D
Sbjct: 249 GKSVKGRVNQVLTFQGLDRMQTPLAGPGDIVLINGIEDIGIGVTVTDPANPAPLPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQ+ +RL E+++N+ LRV + ++ I+EV GRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQLWDRLQKELQHNVALRVKETD-EEGIFEVMGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK ++G +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVFKDIDGVKHEPIELVTADIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K D
Sbjct: 428 KGELVNMESDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKANDPVYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI +TLEY +EFI DDELVEITPK+IRLRKR L ENERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSIRLRKRHLTENERKR 603
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F++ + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCAVSWEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ I+ +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDSVVLLIDAQEGPMPQTRFVTKKALALGLRPILVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|344166911|emb|CCA79101.1| translation initiation factor IF-2 [blood disease bacterium R229]
Length = 964
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/539 (64%), Positives = 445/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ ++
Sbjct: 398 MAVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAIAAKLDDPEALLIEGGDEQ 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 458 ADVEAETRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 517
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 518 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 577
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L+SE VIPEEYGG SPF+ +SAKTG GI +LLEN+ LQAE+LELKAP++
Sbjct: 578 PEANPDRVKQELVSESVIPEEYGGDSPFVPVSAKTGQGIEELLENVLLQAEVLELKAPIS 637
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 638 APAKGLVVEAQLDKGKGPIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKEAGP 697
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K E M ++
Sbjct: 698 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLARQQAAKLETMLEQMS 757
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LST +V++QV+H AVG I+ESD+NLA ASKA+
Sbjct: 758 EGEVKALPLIIKADVQGSQEALVHALNKLSTGEVRVQVVHGAVGGISESDVNLATASKAV 817
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ I+IRY+NIIY+ + E+K+ ++ ++ EKKE GL E+RQ
Sbjct: 818 IIGFNTRADAGARKLAEHQGIDIRYYNIIYDAVDEVKAAMSGMLSPEKKEETTGLVEVRQ 877
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G+++R+S +R+LR +I++GEL+SLKRFKD+VKEVK GFEC
Sbjct: 878 VFHVPKVGAVAGCMVLDGIVKRNSLVRVLRENVVIFSGELESLKRFKDDVKEVKQGFEC 936
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 471 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 517
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 518 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 574
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 575 IDKPEANPDRV 585
>gi|167911165|ref|ZP_02498256.1| translation initiation factor IF-2 [Burkholderia pseudomallei 112]
gi|167919189|ref|ZP_02506280.1| translation initiation factor IF-2 [Burkholderia pseudomallei
BCC215]
Length = 661
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 96 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 154
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 155 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 214
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 215 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 274
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 275 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 334
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 335 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 394
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 395 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 454
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 455 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 514
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 515 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 574
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 575 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 633
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 168 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 214
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 215 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 271
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 272 IDKPEANPDRV 282
>gi|300691721|ref|YP_003752716.1| translation initiation factor IF-2 [Ralstonia solanacearum PSI07]
gi|299078781|emb|CBJ51441.1| Translation initiation factor IF-2 [Ralstonia solanacearum PSI07]
Length = 964
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/539 (64%), Positives = 445/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ ++
Sbjct: 398 MAVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAIAAKLDDPEALLIEGGDEQ 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 458 ADVEAETRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 517
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 518 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 577
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L+SE VIPEEYGG SPF+ +SAKTG GI +LLEN+ LQAE+LELKAP++
Sbjct: 578 PEANPDRVKQELVSESVIPEEYGGDSPFVPVSAKTGQGIEELLENVLLQAEVLELKAPIS 637
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 638 APAKGLVVEAQLDKGKGPIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKEAGP 697
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K E M ++
Sbjct: 698 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLARQQAAKLETMLEQMS 757
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LST +V++QV+H AVG I+ESD+NLA ASKA+
Sbjct: 758 EGEVKALPLIIKADVQGSQEALVHALNKLSTGEVRVQVVHGAVGGISESDVNLATASKAV 817
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ I+IRY+NIIY+ + E+K+ ++ ++ EKKE GL E+RQ
Sbjct: 818 IIGFNTRADAGARKLAEHQGIDIRYYNIIYDAVDEVKAAMSGMLSPEKKEETTGLVEVRQ 877
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G+++R+S +R+LR +I++GEL+SLKRFKD+VKEVK GFEC
Sbjct: 878 VFHVPKVGAVAGCMVLDGIVKRNSLVRVLRENVVIFSGELESLKRFKDDVKEVKQGFEC 936
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 471 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 517
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 518 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 574
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 575 IDKPEANPDRV 585
>gi|167738818|ref|ZP_02411592.1| translation initiation factor IF-2 [Burkholderia pseudomallei 14]
Length = 645
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/539 (65%), Positives = 448/539 (83%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 80 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGEIG 138
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 139 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 198
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 199 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 258
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 259 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 318
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVATVL+QSGTL D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 319 SPAKGIVIEAKLDKGKGPVATVLVQSGTLSRGDVVLAGTAYGRVRAMLDENGKPTKEAGP 378
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 379 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 438
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 439 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 498
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 499 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 558
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGELDSLKRFKD+VKEVK GFEC
Sbjct: 559 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVKQGFEC 617
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 152 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 198
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 199 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 255
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 256 IDKPEANPDRV 266
>gi|421897231|ref|ZP_16327599.1| probable translation initiation factor if-2 (partial sequence c
terminus) protein [Ralstonia solanacearum MolK2]
gi|206588437|emb|CAQ35400.1| probable translation initiation factor if-2 (partial sequence c
terminus) protein [Ralstonia solanacearum MolK2]
Length = 582
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 444/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ +
Sbjct: 16 MAVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAVAAKLDDPEALLVEGVQEQ 75
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 76 QNVEAETRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETQRGVITF 135
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 136 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 195
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L+SE VIPEEYGG SPF+S+SAKTG GI+ LLEN+ LQAE+LELKAPV+
Sbjct: 196 PDANPDRVKQELVSESVIPEEYGGESPFVSVSAKTGQGIDDLLENVLLQAEVLELKAPVS 255
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 256 APAKGLVVEAQLDKGKGPIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKEAGP 315
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K E M ++
Sbjct: 316 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLARQQAAKLETMLEQMS 375
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LST +V++QV+H AVG I+ESD+NLA ASKA+
Sbjct: 376 EGEVKTLPLIIKADVQGSQEALVHALNKLSTGEVRVQVVHGAVGGISESDVNLATASKAV 435
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ I+IRY+NIIY+ + E+K+ ++ ++ EKKE G E+RQ
Sbjct: 436 IIGFNTRADAGARKLAEHQGIDIRYYNIIYDAVDEVKAAMSGMLSPEKKEETTGTVEVRQ 495
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G+++R S +R+LR+ +I++GEL+SLKRFKD+VKEVK GFEC
Sbjct: 496 VFHVPKVGAVAGCMVLDGIVKRSSLVRVLRDNVVIFSGELESLKRFKDDVKEVKQGFEC 554
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 89 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETQRGVITF------------ 135
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 136 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 192
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 193 IDKPDANPDRV 203
>gi|386333734|ref|YP_006029905.1| translation initiation factor if-2 [Ralstonia solanacearum Po82]
gi|334196184|gb|AEG69369.1| translation initiation factor if-2 [Ralstonia solanacearum Po82]
Length = 968
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/539 (64%), Positives = 443/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ +
Sbjct: 402 MAVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAVAAKLDDPEALLVEGVQEQ 461
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 462 QNVEAETRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETQRGVITF 521
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 522 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 581
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L+SE VIPEEYGG SPF+S+SAKTG GI+ LLEN+ LQAE+LELKAPV+
Sbjct: 582 PDANPDRVKQELVSESVIPEEYGGESPFVSVSAKTGQGIDDLLENVLLQAEVLELKAPVS 641
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKG +ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 642 APAKGLVVEAQLDKGKGSIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKEAGP 701
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K E M ++
Sbjct: 702 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLARQQAAKLETMLEQMS 761
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LST +V++QV+H AVG I+ESD+NLA ASKA+
Sbjct: 762 EGEVKTLPLIIKADVQGSQEALVHALNKLSTGEVRVQVVHGAVGGISESDVNLATASKAV 821
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ I+IRY+NIIY+ + E+K+ ++ ++ EKKE G E+RQ
Sbjct: 822 IIGFNTRADAGARKLAEHQGIDIRYYNIIYDAVDEVKAAMSGMLSPEKKEETTGTVEVRQ 881
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G+++R S +R+LR+ +I++GEL+SLKRFKD+VKEVK GFEC
Sbjct: 882 VFHVPKVGAVAGCMVLDGIVKRSSLVRVLRDNVVIFSGELESLKRFKDDVKEVKQGFEC 940
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 475 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETQRGVITF------------ 521
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 522 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 578
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 579 IDKPDANPDRV 589
>gi|254468417|ref|ZP_05081823.1| GTP-binding protein TypA/BipA [beta proteobacterium KB13]
gi|207087227|gb|EDZ64510.1| GTP-binding protein TypA/BipA [beta proteobacterium KB13]
Length = 603
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/596 (60%), Positives = 476/596 (79%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF ++ ++ R+MDSN++EKERGITI +KN ++ +N T
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFEAHKEVSERVMDSNDLEKERGITILAKNTALTFNDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+L MVD LLL+DAV+GPMPQTRFVT+KAL LG +PIVV+N
Sbjct: 69 LINIVDTPGHADFGGEVERVLGMVDGCLLLVDAVDGPMPQTRFVTKKALSLGLRPIVVLN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLF L A +EQLDFPV+Y SAL+GYA + +M PLFE
Sbjct: 129 KIDRPGARCDWVINQTFDLFANLGANDEQLDFPVVYASALNGYAKLKEEDSNDDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+L +V + + + PLQ+QI +L+YSSY G++ +GR+ +G IK V +M G D K +
Sbjct: 189 TVLSHVQAPEGDPSAPLQMQISALDYSSYTGRLAVGRVQNGTIKQGMSVSVMAG-DKKVS 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +IN++ FKGL+RV + EA +GDI++I+GIEEI IG TIC KP GLP++ +DEPTL
Sbjct: 248 QGRINEVLGFKGLERVAIPEASAGDIIIISGIEEIGIGYTICSNDKPEGLPLMKVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T++F+VN+SPLAGREGKF+T+RQIK+RLD E+ N+ LRV + D ++ VSGRGELHL
Sbjct: 308 TMDFVVNSSPLAGREGKFVTSRQIKDRLDRELLTNVALRVEETS-DADVFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL+ENMRREGYE++V +PRV+FK ++G EPYE L VDI+ +QG +M++L +R G+L
Sbjct: 367 TILLENMRREGYEIAVGKPRVVFKEIDGVKSEPYEFLTVDIDNDSQGAVMEELGHRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + R RLEYRIP+RGLIGFQ+EF+TLTRGTG+++H+F++Y P K D+ R
Sbjct: 427 ANMENDGVGRTRLEYRIPARGLIGFQSEFLTLTRGTGIMAHIFDDYGPI----KDDIPGR 482
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLIS G AVAY+LWKLQDRGR+F++ D +YEGM+IGIHSRDNDL+VNPIK KQL
Sbjct: 483 RNGVLISAEHGDAVAYALWKLQDRGRMFVHPGDKLYEGMVIGIHSRDNDLVVNPIKGKQL 542
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG DEA+ L PI ++LEYA+EFI+DDELVEITP++IR+RKRFL E+ERK+
Sbjct: 543 TNVRASGKDEAVNLTPPIPLSLEYAVEFIDDDELVEITPQSIRIRKRFLLEHERKR 598
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 110/255 (43%), Gaps = 37/255 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F +++ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFEAHKEVSERVMDSNDLEKERGITILAKNTALTFND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D +L+V A DG MPQTR A G+ IV +
Sbjct: 68 TLINIVDTPGHADFGGEVERVLGMVDGCLLLVDAVDGPMPQTRFVTKKALSLGLRPIVVL 127
Query: 176 NKIDKLDINLDRIKQ---DLISEQVIPEEYGGASPFISISAKTGVGINKLLENIS----- 227
NKID+ D + DL + +E F + A G KL E S
Sbjct: 128 NKIDRPGARCDWVINQTFDLFANLGANDE---QLDFPVVYASALNGYAKLKEEDSNDDMK 184
Query: 228 --LQAEILELKAPVTTPAKGVIIE-SRLDKGK--GPVATVLIQSGTLR--CSDIVVAG-- 278
+ + ++AP P+ + ++ S LD G +A +Q+GT++ S V+AG
Sbjct: 185 PLFETVLSHVQAPEGDPSAPLQMQISALDYSSYTGRLAVGRVQNGTIKQGMSVSVMAGDK 244
Query: 279 -ASYGRIRSMLNENG 292
S GRI +L G
Sbjct: 245 KVSQGRINEVLGFKG 259
>gi|344171621|emb|CCA84241.1| translation initiation factor IF-2 [Ralstonia syzygii R24]
Length = 965
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/539 (64%), Positives = 445/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ ++
Sbjct: 399 MAVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAIAAKLDDPEALLIEGGDEQ 458
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 459 ADVEAETRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 518
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 519 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 578
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L+SE VIPEEYGG SPF+ +SAKTG GI +LLEN+ LQAE+LELKAP++
Sbjct: 579 PEANPDRVKQELVSESVIPEEYGGDSPFVPVSAKTGQGIEELLENVLLQAEVLELKAPIS 638
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 639 APAKGLVVEAQLDKGKGPIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKEAGP 698
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K E M ++
Sbjct: 699 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLARQQAAKLETMLEQMS 758
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LST +V++QV+H AVG I+ESD+NLA ASKA+
Sbjct: 759 EGEVKALPLIIKADVQGSQEALVHALNKLSTGEVRVQVVHGAVGGISESDVNLATASKAV 818
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ I+IRY+NIIY+ + E+K+ ++ ++ EKKE GL E+RQ
Sbjct: 819 IIGFNTRADAGARKLAEHQGIDIRYYNIIYDAVDEVKAAMSGMLSPEKKEETTGLVEVRQ 878
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G+++R+S +R+LR +I++GEL+SLKRFKD+VKEVK GFEC
Sbjct: 879 VFHVPKVGAVAGCMVLDGIVKRNSLVRVLRENVVIFSGELESLKRFKDDVKEVKQGFEC 937
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 472 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 518
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 519 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 575
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 576 IDKPEANPDRV 586
>gi|421888448|ref|ZP_16319542.1| Translation initiation factor IF-2 [Ralstonia solanacearum K60-1]
gi|378966183|emb|CCF96290.1| Translation initiation factor IF-2 [Ralstonia solanacearum K60-1]
Length = 966
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/539 (64%), Positives = 443/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ +
Sbjct: 400 MAVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAVAAKLDDPEALLVEGVQEQ 459
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 460 QNVEAETRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETQRGVITF 519
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 520 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 579
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E VIPEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV+
Sbjct: 580 PEANPDRVKQELVAESVIPEEYGGESPFVPVSAKTGQGIDDLLENVLLQAEVLELKAPVS 639
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 640 APAKGLVVEAQLDKGKGPIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKEAGP 699
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K E M ++
Sbjct: 700 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLARQQAAKLETMLEQMS 759
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LST +V++QV+H AVG I+ESD+NLA ASKA+
Sbjct: 760 EGEVKTLPLIIKADVQGSQEALVHALNKLSTGEVRVQVVHGAVGGISESDVNLATASKAV 819
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ I+IRY+NIIY+ + E+K+ ++ ++ EKKE G E+RQ
Sbjct: 820 IIGFNTRADAGARKLAEHQGIDIRYYNIIYDAVDEVKAAMSGMLSPEKKEETTGTVEVRQ 879
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G+++R S +R+LR+ +I++GEL+SLKRFKD+VKEVK GFEC
Sbjct: 880 VFHVPKVGAVAGCMVLDGIVKRSSLVRVLRDNVVIFSGELESLKRFKDDVKEVKQGFEC 938
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 473 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETQRGVITF------------ 519
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 520 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 576
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 577 IDKPEANPDRV 587
>gi|393778288|ref|ZP_10366567.1| translation initiation factor if-2 [Ralstonia sp. PBA]
gi|392714754|gb|EIZ02349.1| translation initiation factor if-2 [Ralstonia sp. PBA]
Length = 962
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/539 (64%), Positives = 447/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ ++ E +
Sbjct: 397 MSVKASEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHKAFAAKLDDPEALII-EGAEP 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A +L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 456 SDAVALPRPPVVTVMGHVDHGKTSLLDYIRRAKVAVGEAGGITQHIGAYHVETERGVVTF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI+H+K +GVP++VAINKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAISHSKAAGVPIVVAINKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+K +L++E+V+PEEYGG SPF+ +SAKTG GI+ LLE + LQAE+LELKAPV
Sbjct: 576 PEANPDRVKTELVAEEVVPEEYGGDSPFVPVSAKTGAGIDDLLEQVLLQAEVLELKAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGPVAT+L+QSGTL+ DIV+AG++YGR+R+ML+ENG+ I EAGP
Sbjct: 636 APAKGLVVEAQLDKGKGPVATILVQSGTLKRGDIVLAGSAYGRVRAMLDENGRPIKEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KARE+ LFRQGKFRDVKL+KQ+ K EN+ +
Sbjct: 696 SIPVEIQGLSEVPRAGEEVVVLPDERKAREVALFRQGKFRDVKLAKQQAAKLENLMEQMT 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ VK L +IIK DV GS+E L +SL LST +V++Q++H AVG I+ESD+NLA ASKA+
Sbjct: 756 EGDVKTLPLIIKADVQGSQEALAQSLLKLSTGEVRVQIVHAAVGGISESDVNLATASKAV 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + E+K+ ++ ++ EKKE ++G EIRQ
Sbjct: 816 IIGFNTRADAGARKLAESNGVDIRYYNIIYDAVDEVKAAMSGMLSPEKKEEVIGQIEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G+++R S++R+LRN ++ GELDSLKRFKD+VKEVK GFEC
Sbjct: 876 VFKVPKVGAVAGCMVLDGMVKRSSRVRLLRNNVVLHDGELDSLKRFKDDVKEVKQGFEC 934
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E ERG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVAVGEAGGITQHI-GAYHVETERGVVTF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + G +V +NK
Sbjct: 516 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAISHSKAAGVPIVVAINK 572
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A P+ V T + +++ E D P + SA G
Sbjct: 573 IDKPEANPDRV--KTELVAEEVVPEEYGGDSPFVPVSAKTG 611
>gi|444921573|ref|ZP_21241408.1| GTP-binding protein typA/BipA [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507300|gb|ELV07477.1| GTP-binding protein typA/BipA [Wohlfahrtiimonas chitiniclastica SH04]
Length = 607
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/596 (61%), Positives = 458/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL++ LL+QSGTF + R+MDS +IEKERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVNQLLKQSGTFDPRMQVADRVMDSGQIEKERGITILAKNTAINWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KA +GFKPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTQKAFAMGFKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D TFDLFDKL ATEEQLDFPVIY S L G+A R G+M LFE
Sbjct: 129 KIDRPGARPDWVLDQTFDLFDKLGATEEQLDFPVIYASGLSGFAGNTPDVRDGDMTALFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V K + P QLQ+ SL+Y+SY+G IG+GRI G+IK+ V I++ K N
Sbjct: 189 AIVKHVDAPKVEVDAPFQLQVSSLDYNSYVGLIGVGRIQRGQIKTNSQVTIIDREGKKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI +I F GLDRV A +GDI+ TGI+ + I T+CDP+ P LP L +DEPT+
Sbjct: 249 -GKIQKILGFHGLDRVEFESAQAGDIICFTGIDPLFISDTLCDPAHPEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+++ VN SP AG+EGKF+T+RQIK RL+ E+ +N+ LRV ++ D +++SGRGELHL
Sbjct: 308 SMSVQVNTSPFAGKEGKFVTSRQIKERLEKELLHNVALRV-EDTEDPDRFKISGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREG+E++V RP VIF+ NG EPYE L DIEE +QG IM+++ R G+L
Sbjct: 367 SILIETMRREGFEMAVGRPEVIFREENGVKVEPYETLTFDIEEDHQGKIMEQMGIRFGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RLEY IPSRGLIGFQ EF+TLT GTGL+ H F+ Y P+ K ++G+R
Sbjct: 427 TNMVPDGKGRIRLEYMIPSRGLIGFQTEFMTLTSGTGLMFHNFDHYGPY---KKGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA AYSL+ LQDRGRLFI H + VYEG +IGIHSRDNDL VNP+K KQL
Sbjct: 484 LNGVLISIGTGKASAYSLFNLQDRGRLFIGHAEEVYEGQLIGIHSRDNDLTVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L PI++TLE AIEFI+DDELVE+TPK+IRLRK++L EN+RK+
Sbjct: 544 TNMRASGTDEALTLTPPIRMTLEQAIEFIDDDELVEVTPKSIRLRKKYLTENDRKR 599
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------EAGGITQHIG----AYNVVTNHGS 117
+ I+ HVDHGKT+L++ + K + F ++G I + G A N N
Sbjct: 8 IAIIAHVDHGKTTLVNQLLKQSGTFDPRMQVADRVMDSGQIEKERGITILAKNTAINWND 67
Query: 118 --ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A +G MPQTR A G IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTQKAFAMGFKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|171317092|ref|ZP_02906295.1| translation initiation factor IF-2 [Burkholderia ambifaria MEX-5]
gi|171097726|gb|EDT42553.1| translation initiation factor IF-2 [Burkholderia ambifaria MEX-5]
Length = 972
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 447/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 407 MSIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGETT 465
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 466 TDAEQLPRPPVVTVMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 525
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 526 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 585
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTGVGI+ LLEN+ LQAE+LELKAP+
Sbjct: 586 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGVGIDDLLENVLLQAEVLELKAPIE 645
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 646 APAKGIVIEAKLDKGKGPVATILVQSGTLNRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 705
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 706 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 765
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LST +V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 766 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTAEVRVQIVHSAVGGISENDVNLATASKAV 825
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 826 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVITGMVEVRQ 885
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 886 VFKVPKIGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 944
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+DH+ R + I I + +E RG+ F
Sbjct: 479 VMGHVDHGKTSLLDHIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 525
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 526 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 582
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 583 IDKPEANPDRV 593
>gi|410693510|ref|YP_003624131.1| GTP-binding protein; Tyrosine phosphorylated protein A [Thiomonas sp.
3As]
gi|294339934|emb|CAZ88297.1| GTP-binding protein; Tyrosine phosphorylated protein A [Thiomonas sp.
3As]
Length = 608
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/600 (60%), Positives = 463/600 (77%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IE+ERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG +PIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A+P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+ + E +Q +M
Sbjct: 129 KVDKPGAKPDAVVNAAFDLFDKLGATDEQLDFPVVYASGINGWTSLEEGEPGQQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP H ++ PLQLQI +L+Y+S++G+IG+GRI +G IK DV++M G D
Sbjct: 189 ALFNTILKHVPPHSGDAAAPLQLQISALDYNSFVGRIGVGRINAGTIKPGMDVLVMEGVD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K ++NQ+ F+GLDRV V EA GDIVLI GI +I IG T+ DP P LPML +D
Sbjct: 249 GNSIKGRVNQVLTFQGLDRVQVTEAGPGDIVLINGIADIGIGVTVTDPLNPAPLPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV + +D I+EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQSNVALRVKETD-EDGIFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK ++G +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVFKDVDGVRHEPIELVTADIEEQHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K +
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDGYEPH----KGE 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ R+NGVLIS G+ Y+L KL DRGR+F+ D VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 IAGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKAGDPVYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI + LEY +EFI DDELVEITPK++RLRKR+L E ERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKVTPPIDLNLEYGVEFIEDDELVEITPKSVRLRKRYLTEQERKR 603
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK D +
Sbjct: 128 NKVDKPGAKPDAV 140
>gi|170696459|ref|ZP_02887585.1| translation initiation factor IF-2 [Burkholderia graminis C4D1M]
gi|170138612|gb|EDT06814.1| translation initiation factor IF-2 [Burkholderia graminis C4D1M]
Length = 981
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/539 (64%), Positives = 445/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK++MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 417 MAVKASEVIKSMMKLGQMVTINQMLDQETAMIIVEELGHHAVAAKLDDPEAMLVEGEVSD 476
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 477 --AEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 534
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 535 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 594
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E V+PEEYGG SPF+S+SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 595 PDANPDRVKQELVAEGVVPEEYGGDSPFVSVSAKTGSGIDDLLENVLLQAEVLELKAPVE 654
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 655 APAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKSAGP 714
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KARE+ LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 715 SIPVEIQGLSEVPQAGEEVIVMPDERKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMG 774
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ + +I+K DV GS+E L +SL LSTD+V++Q++H AVG I+ESD+NLA ASKA+
Sbjct: 775 EGEVQYMPLIVKADVQGSQEALVQSLLKLSTDEVRVQIVHGAVGGISESDVNLATASKAV 834
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + E+K+ ++ ++ EK+E + G E+RQ
Sbjct: 835 IIGFNTRADAQARKLAESNGVDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGTVEVRQ 894
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G ++R S +R+LRN +I+TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 895 VFKVPKVGTVAGCMVTDGFVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFEC 953
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 488 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 534
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 535 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 591
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 592 IDKPDANPDRV 602
>gi|296135771|ref|YP_003643013.1| GTP-binding protein TypA [Thiomonas intermedia K12]
gi|295795893|gb|ADG30683.1| GTP-binding protein TypA [Thiomonas intermedia K12]
Length = 608
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/600 (60%), Positives = 463/600 (77%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD+N IE+ERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWEGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG +PIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN--ENSKARQG--NMI 1101
K+D+ A+P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+ + E +Q +M
Sbjct: 129 KVDKPGAKPDAVVNAAFDLFDKLGATDEQLDFPVVYASGINGWTSLEEGEPGQQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF ILK+VP H ++ PLQLQI +L+Y+S++G+IG+GRI +G IK DV++M G D
Sbjct: 189 ALFNTILKHVPPHSGDAAAPLQLQISALDYNSFVGRIGVGRINAGTIKPGMDVLVMEGVD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K ++NQ+ F+GLDRV V EA GDIVLI GI +I IG T+ DP P LPML +D
Sbjct: 249 GNSFKGRVNQVLTFQGLDRVQVTEAGPGDIVLINGIADIGIGVTVTDPLNPAPLPMLKVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGK++T+RQI +RL E+++N+ LRV + +D ++EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKYVTSRQIWDRLQKELQSNVALRVKETD-EDGVFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV+FK ++G +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVFKDVDGVRHEPIELVTADIEEQHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLIS++F+ Y P K +
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDGYEPH----KGE 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ R+NGVLIS G+ Y+L KL DRGR+F+ D VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 IAGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKAGDPVYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI + LEY +EFI DDELVEITPK++RLRKR+L E ERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKVTPPIDLNLEYGVEFIEDDELVEITPKSVRLRKRYLTEQERKR 603
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNNAIERERGITILAKNCAVSWEG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK D +
Sbjct: 128 NKVDKPGAKPDAV 140
>gi|421477197|ref|ZP_15925039.1| translation initiation factor IF-2, partial [Burkholderia
multivorans CF2]
gi|400226926|gb|EJO56957.1| translation initiation factor IF-2, partial [Burkholderia
multivorans CF2]
Length = 660
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/539 (65%), Positives = 447/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 95 MAIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRALAAKLDDPEALLV-EGETG 153
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 154 SDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 213
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 214 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 273
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 274 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 333
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 334 APAKGIVIEAKLDKGKGPVATMLVQSGTLSRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 393
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 394 SIPVEIQGLSEVPAAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 453
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LSTD+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 454 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTDEVRVQIVHSAVGGISESDVNLATASKAV 513
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 514 IIGFNTRADAQARKLAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 573
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 574 VFKVPKVGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 632
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 167 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 213
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 214 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 270
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 271 IDKPEANPDRV 281
>gi|167587338|ref|ZP_02379726.1| translation initiation factor IF-2 [Burkholderia ubonensis Bu]
Length = 950
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/539 (64%), Positives = 446/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK +MK+GQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ E
Sbjct: 385 MAIKASEVIKVMMKMGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLV-EGETG 443
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 444 TDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 503
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 504 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 563
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 564 PEANPDRVKQELVAEGVVPEEYGGDSPFVPVSAKTGTGIDDLLENVLLQAEVLELKAPVE 623
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL DIV+AG +YGR+R+ML+ENGK EAGP
Sbjct: 624 APAKGIVIEAKLDKGKGPVATMLVQSGTLNRGDIVLAGTAYGRVRAMLDENGKPTKEAGP 683
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 684 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 743
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS+E L +SL LST +V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 744 EGEVQNLPLIIKADVQGSQEALVQSLLKLSTSEVRVQIVHSAVGGISESDVNLATASKAV 803
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 804 IIGFNTRADAQARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 863
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I+TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 864 VFKVPKVGTVAGCMVTDGIVKRSSSVRVLRNNVVIFTGELESLKRFKDDVKEVKQGFEC 922
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 457 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 503
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 504 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 560
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 561 IDKPEANPDRV 571
>gi|299067341|emb|CBJ38538.1| Translation initiation factor IF-2 [Ralstonia solanacearum CMR15]
Length = 964
Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/539 (64%), Positives = 440/539 (81%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ +
Sbjct: 398 MAVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAVAAKLDDPEALLVEGVQEQ 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 458 QNVEAEARPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETQRGVITF 517
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 518 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 577
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L+SE VIPEEYGG SPF+ +SAKTG GI LLEN+ LQAE+LELKAPV
Sbjct: 578 PDANPDRVKQELVSESVIPEEYGGDSPFVPVSAKTGEGIETLLENVLLQAEVLELKAPVN 637
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG+++E++LDKGKGP+ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 638 AAAKGLVVEAQLDKGKGPIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKEAGP 697
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K E M ++
Sbjct: 698 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLARQQAAKLETMLEQMS 757
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LST +V++QV+H AVG I+ESD+NLA ASKA+
Sbjct: 758 EGEVKTLPLIIKADVQGSQEALVHALNKLSTGEVRVQVVHGAVGGISESDVNLATASKAV 817
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ I+IRY+NIIY+ + E+K+ ++ ++ EKKE GL E+RQ
Sbjct: 818 IIGFNTRADAGARKLAEHQGIDIRYYNIIYDAVDEVKAAMSGMLSPEKKEETTGLVEVRQ 877
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G+++R S +R+LR +I++GEL+SLKRFKD+VKEVK GFEC
Sbjct: 878 VFHVPKVGAVAGCMVLDGIVKRSSLVRVLRENVVIFSGELESLKRFKDDVKEVKQGFEC 936
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 471 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETQRGVITF------------ 517
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 518 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 574
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 575 IDKPDANPDRV 585
>gi|114320102|ref|YP_741785.1| GTP-binding protein TypA [Alkalilimnicola ehrlichii MLHE-1]
gi|114226496|gb|ABI56295.1| GTP-binding protein TypA [Alkalilimnicola ehrlichii MLHE-1]
Length = 602
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 464/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN++EKERGITI SKN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLETRGEAVERVMDSNDLEKERGITILSKNTAIQWNDW 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KAL LG +PIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKALALGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +ARP+WVVD TFDLFD+L A++EQLDFP+++ SAL GYA+E+S+AR G+M PLFE
Sbjct: 129 KIDRPSARPDWVVDQTFDLFDRLGASDEQLDFPIVFASALQGYASEDSEARGGDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I ++VP + +++ P Q+Q+ SL+Y+SY+G IGIGRI GR+++ + I+ G D +
Sbjct: 189 TITRHVPAPEVDADGPFQMQVSSLDYNSYVGVIGIGRITRGRVRTNSPISII-GRDGRKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I Q+ F GLDRV V EA +GDI+ TG E + I T+ DP+ P+ LP L +DEPT+
Sbjct: 248 NGRILQVLGFHGLDRVEVPEARAGDIIAFTGCEGLNISDTLTDPAHPDALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AGR+GK++T+RQI+ RL+ E+ +N+ LRV D + VSGRGELHL
Sbjct: 308 SMTFQVNTSPFAGRDGKYVTSRQIRERLERELIHNVALRVEPTDDPDR-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL VSRP VI + ++G EP+E L VD+EE +QG +M+KL RGG+L
Sbjct: 367 SVLIENMRREGYELGVSRPEVIVREIDGVQQEPWEQLTVDVEEQHQGAVMEKLGERGGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + + RVRL++ IP+RGLIGF+ EF+T T GTGL+ HVF+ Y P + D G R
Sbjct: 427 QDMIPDGRGRVRLDFIIPARGLIGFRTEFMTATSGTGLMYHVFDHYGPV---KQGDFGSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV++S GKA+AY+L+ LQ+RG+LFI H VYEGMI+GIH+RDNDL+VNP+K KQL
Sbjct: 484 HNGVMVSMAKGKALAYALFNLQERGKLFIGHGAEVYEGMIVGIHARDNDLVVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R++GSDE + L I +TLE A+EFINDDELVE+TP+ IRLRK+ LKE+ERK+
Sbjct: 544 TNVRAAGSDENLILTPAIDLTLEQALEFINDDELVEVTPEAIRLRKKLLKEHERKR 599
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLETRGEAVERVMDSNDLEKERGITILSKNTAIQWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV +
Sbjct: 68 WRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKALALGLRPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NKID+ D +
Sbjct: 128 NKIDRPSARPDWV 140
>gi|187923624|ref|YP_001895266.1| translation initiation factor IF-2 [Burkholderia phytofirmans PsJN]
gi|238689477|sp|B2T381.1|IF2_BURPP RecName: Full=Translation initiation factor IF-2
gi|187714818|gb|ACD16042.1| translation initiation factor IF-2 [Burkholderia phytofirmans PsJN]
Length = 986
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/539 (64%), Positives = 444/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK++MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 422 MAVKASEVIKSMMKLGQMVTINQMLDQETAMIIVEELGHHAVAAKLDDPEAMLVEGEISD 481
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AESL R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 482 --AESLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 539
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 540 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 599
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E V+PEEYGG SPF+S+SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 600 PDANPDRVKQELVAEGVVPEEYGGDSPFVSVSAKTGAGIDDLLENVLLQAEVLELKAPVE 659
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 660 APAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKSAGP 719
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +++KARE+ LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 720 SIPVEIQGLSEVPQAGEEVIVMPDDRKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMG 779
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V + +I+K DV GS+E L +SL LSTD+V++Q++H AVG I+ESD+NLA ASKA+
Sbjct: 780 EGEVAYMPLIVKADVQGSQEALVQSLLKLSTDEVRVQIVHGAVGGISESDVNLATASKAV 839
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + E+K+ ++ ++ EK+E + G E+RQ
Sbjct: 840 IIGFNTRADAQARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLAPEKREIVTGTVEVRQ 899
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G ++R S +R+LRN +I+TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 900 VFKVPKIGAVAGCMVTDGFVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFEC 958
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 493 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 539
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 540 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 596
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 597 IDKPDANPDRV 607
>gi|91782989|ref|YP_558195.1| translation initiation factor IF-2 [Burkholderia xenovorans LB400]
gi|122970532|sp|Q140U6.1|IF2_BURXL RecName: Full=Translation initiation factor IF-2
gi|91686943|gb|ABE30143.1| bacterial translation initiation factor 2 (bIF-2) [Burkholderia
xenovorans LB400]
Length = 989
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/539 (64%), Positives = 445/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK++MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 425 MAVKASEVIKSMMKLGQMVTINQMLDQETAMIIVEELGHHAVAAKLDDPEAMLVEGEVSD 484
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AESL R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 485 --AESLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 542
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 543 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 602
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+L++E V+PEEYGG SPF+S+SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 603 PDANPERVKQELVAEGVVPEEYGGDSPFVSVSAKTGAGIDDLLENVLLQAEVLELKAPVE 662
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 663 APAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKSAGP 722
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KARE+ LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 723 SIPVEIQGLSEVPQAGEEVIVMPDERKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMG 782
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ + +I+K DV GS+E L +SL LSTD+V++Q++H AVG I+ESD+NLA ASKA+
Sbjct: 783 EGEVQYMPLIVKADVQGSQEALVQSLLKLSTDEVRVQIVHGAVGGISESDVNLATASKAV 842
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + ++K+ ++ ++ EK+E + G E+RQ
Sbjct: 843 IIGFNTRADAQARKLAEANGVDIRYYNIIYDAVDDVKAAMSGMLAPEKREVVTGTVEVRQ 902
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G ++R S +R+LRN +I+TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 903 VFKVPKIGAVAGCMVTDGFVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFEC 961
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 496 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 542
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 543 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 599
Query: 1047 IDRSNARPEWV 1057
ID+ +A PE V
Sbjct: 600 IDKPDANPERV 610
>gi|413962423|ref|ZP_11401650.1| translation initiation factor IF-2 [Burkholderia sp. SJ98]
gi|413928255|gb|EKS67543.1| translation initiation factor IF-2 [Burkholderia sp. SJ98]
Length = 979
Score = 748 bits (1930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/539 (65%), Positives = 446/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+
Sbjct: 413 MSVKASEVIKVMMKLGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLIEGETTE 472
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
TAE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 473 ETAEKLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVDTPRGVITF 532
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVP++VAINKIDK
Sbjct: 533 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPIVVAINKIDK 592
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPFI +SAKTG GI+ LLEN+SLQAE+LEL APV
Sbjct: 593 PEANPDRVKQELVAEGVVPEEYGGDSPFIEVSAKTGRGIDDLLENVSLQAEVLELTAPVE 652
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 653 AAAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKTAGP 712
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 713 SIPVEIQGLSEVPAAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLENMLEQMG 772
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +I+K DV GS+E L +SL+ LST++V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 773 EGEVQNLPLIVKADVQGSQEALVQSLQKLSTNEVRVQIVHSAVGAISESDVNLATASKAV 832
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RK+A+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 833 IIGFNTRADAQARKVAEANGIDIRYYNIIYDAVDEVKAAMSGMLAPEKRETVTGMVEVRQ 892
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V KV IAGC + +G+++R S +R++RN +I TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 893 VIRVPKVGLIAGCMVTDGVVKRSSSVRVIRNNVVIHTGELDSLKRFKDDVKEVRQGFEC 951
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 486 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVDTPRGVITF------------ 532
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 533 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPIVVAINK 589
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A P+ V + + + E D P I SA G
Sbjct: 590 IDKPEANPDRVKQEL--VAEGVVPEEYGGDSPFIEVSAKTG 628
>gi|332283702|ref|YP_004415613.1| GTP-binding protein LepA [Pusillimonas sp. T7-7]
gi|330427655|gb|AEC18989.1| GTP-binding protein LepA [Pusillimonas sp. T7-7]
Length = 988
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/539 (63%), Positives = 453/539 (84%), Gaps = 3/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K++ VIK+LMKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+FL E ++
Sbjct: 425 MSIKAAEVIKHLMKLGQMVTINQVLDQETAMIVVEELGHTAIAAKLDDPEAFL--ELTES 482
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ A+ L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAYNV T G +TF
Sbjct: 483 VEADQLPRAPVVTVMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYNVKTERGMVTF 542
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVA+DDGVMPQT+EAI HAK +GVPL+VAI KIDK
Sbjct: 543 LDTPGHEAFTAMRARGAQATDIVILVVASDDGVMPQTKEAIHHAKAAGVPLVVAITKIDK 602
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILEL A V
Sbjct: 603 PDGNPERVKQELVAEEVVPEEYGGDVPFVGVSAKTGEGIDSLLENVLLQAEILELTAAVD 662
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E+RLDKG+GPVAT+L+QSGTL D V+AGAS+GR+R+MLNENGK + AGP
Sbjct: 663 APAKGIVVEARLDKGRGPVATILVQSGTLNRGDAVLAGASFGRVRAMLNENGKPVTSAGP 722
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
S+PVEIQGLT+VP +G+E+ + +E+KAREI LFRQGKFRDVKL++Q+ K E+MF++I
Sbjct: 723 SMPVEIQGLTEVPAAGDEVISMADERKAREIALFRQGKFRDVKLARQQAAKLESMFDNIG 782
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E + L +IIKTDV GS+E L SL LST++V++QV+H AVG I+ESD+NLAIAS A+
Sbjct: 783 -EGAQTLALIIKTDVQGSQEALVSSLTKLSTEEVRVQVVHAAVGGISESDVNLAIASHAV 841
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N+I++RY+NIIY+ + ++++ ++ ++ EK+E ++G+ EIR+
Sbjct: 842 VIGFNVRAEQSAKKLAENNDIDLRYYNIIYDAVDDVRNALSGMLAPEKREEVIGMVEIRE 901
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V++V IAGC + +G++RRDS++R+LRN + WTG +DSL+RFKD+VKEVK+GF+C
Sbjct: 902 VYNVSRVGNIAGCMVTDGVVRRDSQVRLLRNHVVHWTGWIDSLRRFKDDVKEVKSGFDC 960
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I N ++ ERG+ F
Sbjct: 496 VMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYN-VKTERGMVTF------------ 542
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ + +G MPQT+ A G +V + K
Sbjct: 543 ---LDTPGHEAFTAMRARGAQATDIVILVVASDDGVMPQTKEAIHHAKAAGVPLVVAITK 599
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ + PE V + +++ E D P + SA G
Sbjct: 600 IDKPDGNPERVKQEL--VAEEVVPEEYGGDVPFVGVSAKTG 638
>gi|399115981|emb|CCG18786.1| translation initiation factor IF-2 [Taylorella equigenitalis 14/56]
Length = 939
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/540 (65%), Positives = 448/540 (82%), Gaps = 4/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LM LGQMVTINQVLDQETAMI+VEE+GH A +KL+DPE+FL E N++
Sbjct: 375 MSVKAAEVIKKLMLLGQMVTINQVLDQETAMIVVEELGHTAIQAKLDDPEAFLDAE-NES 433
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSI-T 119
E RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY V T G + T
Sbjct: 434 RDYEMSTRAPVVTVMGHVDHGKTSLLDYIRRTRVASGEAGGITQHIGAYRVKTKSGDVVT 493
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGAK TDIV++VVAADDGVMPQT+EAI+HAK + VP++VAINKID
Sbjct: 494 FLDTPGHEAFTAMRARGAKATDIVIIVVAADDGVMPQTKEAISHAKAAQVPMVVAINKID 553
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K + N +R+KQ+L++E+VIPEEYGG PF+ +SAKTG GI +LLEN+ LQAEILELKA V
Sbjct: 554 KPEANPERVKQELVAEEVIPEEYGGDVPFVHVSAKTGEGIEELLENVLLQAEILELKAAV 613
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
+PAKG++IE+RLDKGKGPVAT+L+QSGTL D ++AGAS+GR+R+ML+ENGK I EAG
Sbjct: 614 DSPAKGIVIEARLDKGKGPVATILVQSGTLHRGDAILAGASFGRVRAMLDENGKTIDEAG 673
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PS PVEIQGL++VP +G+E+ V+L+E+KAREI LFRQGKFRDVKL++Q+ ENMF
Sbjct: 674 PSYPVEIQGLSEVPDAGDEVLVLLDERKAREIALFRQGKFRDVKLARQQAQNLENMFQ-- 731
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
N E VK L +IIKTDV GS+E L +SL LS D+V++QV+H AVG I+ESD+NLA AS A
Sbjct: 732 NNEGVKTLSLIIKTDVQGSQEALVQSLLKLSGDEVRVQVVHAAVGGISESDVNLATASGA 791
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+IIGFNVRAD +KLA+ N I+IRY+NIIY+ + E+KS ++ ++ +KKE ++GL EIR
Sbjct: 792 VIIGFNVRADQGAKKLAENNGIDIRYYNIIYDAVDEVKSALSGMLTPDKKEEIIGLVEIR 851
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+V ++KV K+AGC + EGL+RR++++R LRN +IWTG LDSLKRFKD+VKEVK+GF+C
Sbjct: 852 EVYTISKVGKVAGCMVTEGLVRREAQVRQLRNNVVIWTGYLDSLKRFKDDVKEVKSGFDC 911
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY-NGT 985
++ HVDHGKT+L+D++ R R+ + GIT ++ +G
Sbjct: 447 VMGHVDHGKTSLLDYIRR------------TRVASG----EAGGITQHIGAYRVKTKSGD 490
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+ +DTPGH F R D V++++ A +G MPQT+ A +V +N
Sbjct: 491 VVTFLDTPGHEAFTAMRARGAKATDIVIIVVAADDGVMPQTKEAISHAKAAQVPMVVAIN 550
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
KID+ A PE V + +++ E D P ++ SA G
Sbjct: 551 KIDKPEANPERVKQEL--VAEEVIPEEYGGDVPFVHVSAKTG 590
>gi|73541716|ref|YP_296236.1| translation initiation factor IF-2 [Ralstonia eutropha JMP134]
gi|90101375|sp|Q46ZP1.1|IF2_RALEJ RecName: Full=Translation initiation factor IF-2
gi|72119129|gb|AAZ61392.1| bacterial translation initiation factor 2 (bIF-2) [Ralstonia
eutropha JMP134]
Length = 966
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/539 (64%), Positives = 445/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ + ++
Sbjct: 400 MAVKASEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHKAFAAKLDDPEALLVVDGEEH 459
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 460 TDAEQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETERGVITF 519
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 520 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 579
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++EQV+PEEYGG SPF+ +SAKTG GI LLE + LQAE+LELKAPV
Sbjct: 580 PDANPDRVKQELVAEQVLPEEYGGDSPFVPVSAKTGAGIEDLLEQVLLQAEVLELKAPVD 639
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKGKGP+AT+L+ SGTL+ D+V+AG++YGR+R+ML+ENGK EAGP
Sbjct: 640 APAKGLVVEAQLDKGKGPIATILVSSGTLKRGDVVLAGSAYGRVRAMLDENGKPTKEAGP 699
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E M +
Sbjct: 700 SIPVEIQGLSEVPAAGEEVLVLPDERKAREIALFRQGKFRDVKLAKQQAAKLETMLEQMT 759
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ V+ L +I+K DV GS+E L +SL+ LST +V++Q++H VG I+ESD+NLA ASKA+
Sbjct: 760 EGDVQTLPLIVKADVQGSQEALVQSLQKLSTAEVRVQIVHAGVGAISESDVNLATASKAV 819
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RKLA+ + I+IRY+NIIY+ + EIK+ ++ ++ EK+E +G E+RQ
Sbjct: 820 IIGFNVRADAGARKLAENHGIDIRYYNIIYDAVDEIKAAMSGMLAPEKRETTIGQVEVRQ 879
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +GL++R+S +R+LRN ++ TGELDSLKRFKD+VKEVK GFEC
Sbjct: 880 VFRVPKIGAVAGCMVTDGLVKRNSLVRVLRNNVVVHTGELDSLKRFKDDVKEVKQGFEC 938
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E ERG+ F
Sbjct: 473 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETERGVITF------------ 519
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 520 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 576
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANEN 1092
ID+ +A P+ V + +++ E D P + SA G E+
Sbjct: 577 IDKPDANPDRVKQEL--VAEQVLPEEYGGDSPFVPVSAKTGAGIED 620
>gi|17546008|ref|NP_519410.1| translation initiation factor IF-2 [Ralstonia solanacearum GMI1000]
gi|39931297|sp|Q8XZV6.1|IF2_RALSO RecName: Full=Translation initiation factor IF-2
gi|17428303|emb|CAD14991.1| putative translation initiation factor if-2 protein [Ralstonia
solanacearum GMI1000]
Length = 964
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/539 (64%), Positives = 440/539 (81%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK +MKLGQMVTINQVLDQETAMI+VEEMGH A A+KL+DPE+ L+ +
Sbjct: 398 MAVKAAEVIKQMMKLGQMVTINQVLDQETAMIVVEEMGHQAVAAKLDDPEALLVEGVQEQ 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+ R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 458 QNVEAEARPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 517
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK +GVP++VAINKIDK
Sbjct: 518 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDK 577
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L+SE VIPEEYGG SPF+ +SAKTG GI LLEN+ LQAE+LELKAP+
Sbjct: 578 PEANPDRVKQELVSESVIPEEYGGDSPFVPVSAKTGQGIENLLENVLLQAEVLELKAPIN 637
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG+++E++LDKGKGP+ATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK EAGP
Sbjct: 638 AAAKGLVVEAQLDKGKGPIATVLVQSGTLKRGDVVLAGTAYGRVRAMLDENGKPAKEAGP 697
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL++Q+ K E M ++
Sbjct: 698 SIPVEIQGLSEVPGAGEEVIVLPDERKAREIALFRQGKFRDVKLARQQAAKLETMLEQMS 757
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LST +V++QV+H AVG I+ESD+NLA ASKA+
Sbjct: 758 EGEVKTLPLIIKADVQGSQEALVHALNKLSTGEVRVQVVHGAVGGISESDVNLATASKAV 817
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ I+IRY+NIIY+ + E+K+ ++ ++ EKKE GL E+RQ
Sbjct: 818 IIGFNTRADAGARKLAEHQGIDIRYYNIIYDAVDEVKAAMSGMLSPEKKEETTGLVEVRQ 877
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC +L+G+++R S +R+LR +I++GEL+SLKRFKD+VKEVK GFEC
Sbjct: 878 VFHVPKVGAVAGCMVLDGVVKRSSLVRVLRENVVIFSGELESLKRFKDDVKEVKQGFEC 936
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 471 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 517
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 518 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINK 574
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEE-QLDFPVIYTSALHGYANEN 1092
ID+ A P+ V +L + EE D P + SA G EN
Sbjct: 575 IDKPEANPDRV---KQELVSESVIPEEYGGDSPFVPVSAKTGQGIEN 618
>gi|319778226|ref|YP_004129139.1| translation initiation factor 2 [Taylorella equigenitalis MCE9]
gi|397662009|ref|YP_006502709.1| translation initiation factor IF-2 [Taylorella equigenitalis ATCC
35865]
gi|317108250|gb|ADU90996.1| Translation initiation factor 2 [Taylorella equigenitalis MCE9]
gi|394350188|gb|AFN36102.1| translation initiation factor IF-2 [Taylorella equigenitalis ATCC
35865]
Length = 939
Score = 744 bits (1922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/540 (65%), Positives = 448/540 (82%), Gaps = 4/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LM LGQMVTINQVLDQETAMI+VEE+GH A +KL+DPE+FL E N++
Sbjct: 375 MSVKAAEVIKKLMLLGQMVTINQVLDQETAMIVVEELGHTAIQAKLDDPEAFLDAE-NES 433
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSI-T 119
E RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY V T G + T
Sbjct: 434 RDYEMSTRAPVVTVMGHVDHGKTSLLDYIRRTRVASGEAGGITQHIGAYRVKTKSGDVVT 493
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGAK TDIV++VVAADDGVMPQT+EAI+HAK + VP++VAINKID
Sbjct: 494 FLDTPGHEAFTAMRARGAKATDIVIIVVAADDGVMPQTKEAISHAKAAQVPMVVAINKID 553
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K + N +R+KQ+L++E+VIPEEYGG PF+ +SAKTG GI +LLEN+ LQAEILELKA V
Sbjct: 554 KPEANPERVKQELVAEEVIPEEYGGDVPFVHVSAKTGEGIEELLENVLLQAEILELKAAV 613
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
+PAKG++IE+RLDKGKGPVAT+L+QSGTL D ++AGAS+GR+R+ML+ENGK I EAG
Sbjct: 614 DSPAKGIVIEARLDKGKGPVATILVQSGTLHRGDAILAGASFGRVRAMLDENGKTIDEAG 673
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PS PVEIQGL++VP +G+E+ V+L+E+KAREI LFRQGKFRDVKL++Q+ ENMF
Sbjct: 674 PSYPVEIQGLSEVPDAGDEVLVLLDERKAREIALFRQGKFRDVKLARQQAQNLENMFQ-- 731
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
N E VK L +IIKTDV GS+E L +SL LS D+V++QV+H AVG I+ESD+NLA AS A
Sbjct: 732 NNEGVKTLSLIIKTDVQGSQEALVQSLLKLSGDEVRVQVVHAAVGGISESDVNLATASGA 791
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+IIGFNVRAD +KLA+ N I+IRY+NIIY+ + E+KS ++ ++ +KKE ++GL EIR
Sbjct: 792 VIIGFNVRADQGAKKLAENNGIDIRYYNIIYDAVDEVKSALSGMLTPDKKEEIIGLVEIR 851
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+V ++KV K+AGC + EGL+RR++++R LRN +IWTG LDSLKRFKD+VKEVK+GF+C
Sbjct: 852 EVYTISKVGKVAGCMVTEGLVRREAQVRQLRNNVVIWTGYLDSLKRFKDDVKEVKSGFDC 911
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY-NGT 985
++ HVDHGKT+L+D++ R R+ + GIT ++ +G
Sbjct: 447 VMGHVDHGKTSLLDYIRR------------TRVASG----EAGGITQHIGAYRVKTKSGD 490
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+ +DTPGH F R D V++++ A +G MPQT+ A +V +N
Sbjct: 491 VVTFLDTPGHEAFTAMRARGAKATDIVIIVVAADDGVMPQTKEAISHAKAAQVPMVVAIN 550
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
KID+ A PE V + +++ E D P ++ SA G
Sbjct: 551 KIDKPEANPERVKQEL--VAEEVIPEEYGGDVPFVHVSAKTG 590
>gi|307730028|ref|YP_003907252.1| translation initiation factor IF-2 [Burkholderia sp. CCGE1003]
gi|307584563|gb|ADN57961.1| translation initiation factor IF-2 [Burkholderia sp. CCGE1003]
Length = 977
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/539 (64%), Positives = 444/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK++MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 413 MAVKASEVIKSMMKLGQMVTINQMLDQETAMIIVEELGHHAVAAKLDDPEAMLVEGEVSD 472
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 473 --AEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 530
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 531 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 590
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 591 PEANPERVKQELVTEGVVPEEYGGDSPFVPVSAKTGSGIDDLLENVLLQAEVLELKAPVE 650
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 651 APAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKSAGP 710
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KARE+ LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 711 SIPVEIQGLSEVPQAGEEVIVMPDERKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMG 770
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ + +I+K DV GS+E L +SL LSTD+V++Q++H AVG I+ESD+NLA ASKA+
Sbjct: 771 EGEVQYMPLIVKADVQGSQEALVQSLLKLSTDEVRVQIVHGAVGGISESDVNLATASKAV 830
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + E+K+ ++ ++ EK+E + G E+RQ
Sbjct: 831 IIGFNTRADAQARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGTVEVRQ 890
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G ++R S +R+LRN +I+TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 891 VFKVPKIGAVAGCMVTDGFVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFEC 949
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 484 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 530
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 531 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 587
Query: 1047 IDRSNARPEWV 1057
ID+ A PE V
Sbjct: 588 IDKPEANPERV 598
>gi|385209980|ref|ZP_10036848.1| translation initiation factor IF-2 [Burkholderia sp. Ch1-1]
gi|385182318|gb|EIF31594.1| translation initiation factor IF-2 [Burkholderia sp. Ch1-1]
Length = 989
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/539 (64%), Positives = 444/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK++MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 425 MAVKASEVIKSMMKLGQMVTINQMLDQETAMIIVEELGHHAVAAKLDDPEAMLVEGEVSD 484
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AESL R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 485 --AESLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 542
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 543 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 602
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+L++E V+PEEYGG SPF+S+SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 603 PDANPERVKQELVAEGVVPEEYGGDSPFVSVSAKTGAGIDDLLENVLLQAEVLELKAPVD 662
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 663 APAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKSAGP 722
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +++KARE+ LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 723 SIPVEIQGLSEVPQAGEEVIVMPDDRKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMG 782
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V + +I+K DV GS+E L +SL LSTD+V++Q++H AVG I+ESD+NLA ASKA+
Sbjct: 783 EGEVAYMPLIVKADVQGSQEALVQSLLKLSTDEVRVQIVHGAVGGISESDVNLATASKAV 842
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + ++K+ ++ ++ EK+E + G E+RQ
Sbjct: 843 IIGFNTRADAQARKLAESNGVDIRYYNIIYDAVDDVKAAMSGMLAPEKREIVTGTVEVRQ 902
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G ++R S +R+LRN +I+TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 903 VFKVPKIGAVAGCMVTDGFVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFEC 961
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 496 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 542
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 543 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 599
Query: 1047 IDRSNARPEWV 1057
ID+ +A PE V
Sbjct: 600 IDKPDANPERV 610
>gi|299530195|ref|ZP_07043621.1| GTP-binding protein TypA [Comamonas testosteroni S44]
gi|298721852|gb|EFI62783.1| GTP-binding protein TypA [Comamonas testosteroni S44]
Length = 608
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/600 (58%), Positives = 465/600 (77%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD++ IE+ERGITI +KNC++ + T
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNHAIERERGITILAKNCAVSWKDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG +PIVVVN
Sbjct: 69 HINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS---KARQG-NMI 1101
K+D+ A P+ V++A FDLFDKL AT+EQLDFPV+Y S ++G++++ A+ G +M
Sbjct: 129 KVDKPGANPDKVINAAFDLFDKLGATDEQLDFPVVYASGINGWSSKEEGEPGAKWGEDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ IL +VP + +++ PLQLQ+ +L+YS+++G+IG+GRI G +K Q V +M GPD
Sbjct: 189 ALFDTILDHVPSVQGDASAPLQLQVSALDYSTFVGRIGVGRITQGTLKPGQQVAVMAGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K KINQ+ F+G+DRV EA +IVLI+GIE I IG T+ DP+ P LPML ID
Sbjct: 249 GKSYSGKINQVHTFQGIDRVQATEAGPSEIVLISGIENIGIGETVTDPANPQPLPMLKID 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + +D I+EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELRSNVALRVKETD-EDGIFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+E MRREGYEL+VS+PRV+ + ++GE +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLEEMRREGYELAVSKPRVVMQMIDGEKHEPIELVTADIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLI+++F+ Y P K D
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLIANIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ D VYEGMIIGIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKAGDPVYEGMIIGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI+++LEY +EFI DDEL+EITP ++R+RKR LKE++RK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIELSLEYGVEFIEDDELLEITPTSLRVRKRHLKEHDRKR 603
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + + + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNHAIERERGITILAKNCAVSWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|209520196|ref|ZP_03268967.1| translation initiation factor IF-2 [Burkholderia sp. H160]
gi|209499355|gb|EDZ99439.1| translation initiation factor IF-2 [Burkholderia sp. H160]
Length = 972
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/539 (63%), Positives = 444/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 408 MAVKASEVIKVMMKLGQMVTINQMLDQETAMIIVEELGHRAVAAKLDDPEAMLVE--GEA 465
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDY+R+ V EAGGITQHIGAY+V T G ITF
Sbjct: 466 SDAEALPRPPVVTVMGHVDHGKTSLLDYVRRAKVAAGEAGGITQHIGAYHVETPRGVITF 525
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVPL+VAINKIDK
Sbjct: 526 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPLVVAINKIDK 585
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 586 ADANPERVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 645
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 646 SPAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKSAGP 705
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KARE+ LFRQGKFRDVKL+KQ+ K E M +
Sbjct: 706 SIPVEIQGLSEVPQAGEEVIVMPDERKAREVALFRQGKFRDVKLAKQQAAKLETMLEQMG 765
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ + +I+K DV GS+E L +SL+ LSTD+V++Q++H AVG I+ESD+NLA ASKA+
Sbjct: 766 EGEVQYMPLIVKADVQGSQEALVQSLQKLSTDEVRVQIVHGAVGGISESDVNLATASKAV 825
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + ++K+ ++ ++ EK+E + G E+RQ
Sbjct: 826 IIGFNTRADAQARKLAEANGVDIRYYNIIYDAVDDVKAAMSGMLAPEKREVVTGTVEVRQ 885
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G ++R S +R+LRN +I+TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 886 VFKVPKVGSVAGCMVTDGFVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFEC 944
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 479 VMGHVDHGKTSLLDYVRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 525
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 526 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPLVVAINK 582
Query: 1047 IDRSNARPEWV 1057
ID+++A PE V
Sbjct: 583 IDKADANPERV 593
>gi|348590392|ref|YP_004874854.1| translation initiation factor 2 [Taylorella asinigenitalis MCE3]
gi|347974296|gb|AEP36831.1| Translation initiation factor 2 [Taylorella asinigenitalis MCE3]
Length = 918
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/540 (65%), Positives = 448/540 (82%), Gaps = 4/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LM LGQMVTINQVLDQETAMI+VEE+GH A +KL+DPE+FL E N++
Sbjct: 354 MSVKAAEVIKKLMLLGQMVTINQVLDQETAMIVVEELGHTAIQAKLDDPEAFLDAE-NES 412
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSI-T 119
E RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY V T G + T
Sbjct: 413 RDYEMSTRAPVVTVMGHVDHGKTSLLDYIRRTRVASGEAGGITQHIGAYRVKTKSGDVVT 472
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGA+ TDIV++VVAADDGVMPQT+EAI+HAK +GVP++VAINKID
Sbjct: 473 FLDTPGHEAFTAMRARGAQATDIVIIVVAADDGVMPQTKEAISHAKAAGVPMVVAINKID 532
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K + N +R+KQ+L++E+VIPEEYGG PF+ +SAKTG GI LLEN+ LQAEILELKAPV
Sbjct: 533 KPEANPERVKQELVAEEVIPEEYGGDVPFVHVSAKTGEGIEDLLENVLLQAEILELKAPV 592
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
+PAKG++IE+RLDKGKGPVAT+L+QSGTL D ++AGAS+GR+R+ML+EN + I EAG
Sbjct: 593 DSPAKGIVIEARLDKGKGPVATILVQSGTLHRGDAILAGASFGRVRAMLDENNRTIDEAG 652
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PS PVEIQGL++VP +G+++ V+L+E+KAREI LFRQGKFRDVKL++Q+ ENMF
Sbjct: 653 PSYPVEIQGLSEVPDAGDDVLVLLDERKAREIALFRQGKFRDVKLARQQAQNLENMFQ-- 710
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
N E VK L +IIKTDV GS+E L +SL LS D+V++QV+H AVG I+ESD+NLA AS A
Sbjct: 711 NNEGVKTLSLIIKTDVQGSQEALVQSLLKLSGDEVRVQVVHAAVGGISESDVNLATASGA 770
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+IIGFNVRAD +KLA+ N I+IRY+NIIY+ + E+KS ++ ++ +KKE ++GL EIR
Sbjct: 771 VIIGFNVRADQGAKKLAENNGIDIRYYNIIYDAVDEVKSALSGMLTPDKKEEIIGLVEIR 830
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+V ++KV K+AGC + EGL+RR+S++R LRN +IWTG L+SLKRFKD+VKEVK+GF+C
Sbjct: 831 EVYTISKVGKVAGCMVTEGLVRRESQVRQLRNNVVIWTGYLESLKRFKDDVKEVKSGFDC 890
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY-NGT 985
++ HVDHGKT+L+D++ R R+ + GIT ++ +G
Sbjct: 426 VMGHVDHGKTSLLDYIRR------------TRVASG----EAGGITQHIGAYRVKTKSGD 469
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+ +DTPGH F R D V++++ A +G MPQT+ A G +V +N
Sbjct: 470 VVTFLDTPGHEAFTAMRARGAQATDIVIIVVAADDGVMPQTKEAISHAKAAGVPMVVAIN 529
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANEN 1092
KID+ A PE V + +++ E D P ++ SA G E+
Sbjct: 530 KIDKPEANPERVKQEL--VAEEVIPEEYGGDVPFVHVSAKTGEGIED 574
>gi|264677934|ref|YP_003277841.1| GTP-binding protein TypA [Comamonas testosteroni CNB-2]
gi|262208447|gb|ACY32545.1| GTP-binding protein TypA [Comamonas testosteroni CNB-2]
Length = 608
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/600 (58%), Positives = 465/600 (77%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD++ IE+ERGITI +KNC++ + T
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNHAIERERGITILAKNCAVSWKDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG +PIVVVN
Sbjct: 69 HINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS---KARQG-NMI 1101
K+D+ A P+ V++A FDLFDKL AT+EQLDFPV+Y S ++G++++ A+ G +M
Sbjct: 129 KVDKPGANPDKVINAAFDLFDKLGATDEQLDFPVVYASGINGWSSKEEGEPGAKWGEDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ IL +VP + +++ PLQLQ+ +L+YS+++G+IG+GRI G +K Q V +M GPD
Sbjct: 189 ALFDTILDHVPSVQGDASAPLQLQVSALDYSTFVGRIGVGRITQGTLKPGQQVAVMAGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K KINQ+ F+G+DRV EA +IVLI+GIE I IG T+ DP+ P LPML ID
Sbjct: 249 GKTYSGKINQVHTFQGIDRVQATEAGPSEIVLISGIENIGIGETVTDPANPQPLPMLKID 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + +D I+EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELRSNVALRVKETD-EDGIFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+E MRREGYEL+VS+PRV+ + ++GE +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLEEMRREGYELAVSKPRVVMQMIDGEKHEPIELVTADIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLI+++F+ Y P K D
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLIANIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ D VYEGMIIGIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKAGDPVYEGMIIGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI+++LEY +EFI DDEL+EITP ++R+RKR LKE++RK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIELSLEYGVEFIEDDELLEITPTSLRVRKRHLKEHDRKR 603
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + + + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNHAIERERGITILAKNCAVSWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|399116253|emb|CCG19058.1| translation initiation factor IF-2 [Taylorella asinigenitalis
14/45]
Length = 918
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/540 (65%), Positives = 447/540 (82%), Gaps = 4/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LM LGQMVTINQVLDQETAMI+VEE+GH A +KL+DPE+FL E N++
Sbjct: 354 MSVKAAEVIKKLMLLGQMVTINQVLDQETAMIVVEELGHTAIQAKLDDPEAFLDAE-NES 412
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSI-T 119
E RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY V T G + T
Sbjct: 413 RDYEMSTRAPVVTVMGHVDHGKTSLLDYIRRTRVASGEAGGITQHIGAYRVKTKSGDVVT 472
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGA+ TDIV++VVAADDGVMPQT+EAI+HAK +GVP++VAINKID
Sbjct: 473 FLDTPGHEAFTAMRARGAQATDIVIIVVAADDGVMPQTKEAISHAKAAGVPMVVAINKID 532
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K + N +R+KQ+L++E+VIPEEYGG PF+ +SAKTG GI LLEN+ LQAEILELKAPV
Sbjct: 533 KPEANPERVKQELVAEEVIPEEYGGDVPFVHVSAKTGEGIEDLLENVLLQAEILELKAPV 592
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
+PAKG++IE+RLDKGKGPVAT+L+QSGTL D ++AGAS+GR+R+ML+E + I EAG
Sbjct: 593 DSPAKGIVIEARLDKGKGPVATILVQSGTLHRGDAILAGASFGRVRAMLDEKNRTIDEAG 652
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PS PVEIQGL++VP +G+E+ V+L+E+KAREI LFRQGKFRDVKL++Q+ ENMF
Sbjct: 653 PSYPVEIQGLSEVPDAGDEVLVLLDERKAREIALFRQGKFRDVKLARQQAQNLENMFQ-- 710
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
N E VK L +IIKTDV GS+E L +SL LS D+V++QV+H AVG I+ESD+NLA AS A
Sbjct: 711 NNEGVKTLSLIIKTDVQGSQEALVQSLLKLSGDEVRVQVVHAAVGGISESDVNLATASGA 770
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+I+GFNVRAD +KLA+ N I+IRY+NIIY+ + E+KS ++ ++ +KKE ++GL EIR
Sbjct: 771 VIVGFNVRADQGAKKLAENNGIDIRYYNIIYDAVDEVKSALSGMLTPDKKEEIIGLVEIR 830
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+V ++KV K+AGC + EGL+RR+S++R LRN +IWTG L+SLKRFKD+VKEVK+GF+C
Sbjct: 831 EVYTISKVGKVAGCMVTEGLVRRESQVRQLRNNVVIWTGYLESLKRFKDDVKEVKSGFDC 890
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY-NGT 985
++ HVDHGKT+L+D++ R R+ + GIT ++ +G
Sbjct: 426 VMGHVDHGKTSLLDYIRR------------TRVASG----EAGGITQHIGAYRVKTKSGD 469
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+ +DTPGH F R D V++++ A +G MPQT+ A G +V +N
Sbjct: 470 VVTFLDTPGHEAFTAMRARGAQATDIVIIVVAADDGVMPQTKEAISHAKAAGVPMVVAIN 529
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANEN 1092
KID+ A PE V + +++ E D P ++ SA G E+
Sbjct: 530 KIDKPEANPERVKQEL--VAEEVIPEEYGGDVPFVHVSAKTGEGIED 574
>gi|323525725|ref|YP_004227878.1| translation initiation factor IF-2 [Burkholderia sp. CCGE1001]
gi|323382727|gb|ADX54818.1| translation initiation factor IF-2 [Burkholderia sp. CCGE1001]
Length = 979
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/539 (64%), Positives = 444/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK++MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 415 MAVKASEVIKSMMKLGQMVTINQMLDQETAMIIVEELGHHAVAAKLDDPEAMLVEGEVSD 474
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 475 --AEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 532
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 533 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 592
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 593 PEANPERVKQELVAEGVVPEEYGGDSPFVPVSAKTGSGIDDLLENVLLQAEVLELKAPVE 652
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 653 APAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKSAGP 712
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KARE+ LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 713 SIPVEIQGLSEVPQAGEEVIVMPDERKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMG 772
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ + +I+K DV GS+E L +SL LSTD+V++Q++H AVG I+ESD+NLA ASKA+
Sbjct: 773 EGEVQYMPLIVKADVQGSQEALVQSLLKLSTDEVRVQIVHGAVGGISESDVNLATASKAV 832
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + E+K+ ++ ++ EK+E + G E+RQ
Sbjct: 833 IIGFNTRADAQARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGTVEVRQ 892
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G ++R S +R+LRN +I+TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 893 VFKVPKIGAVAGCMVTDGFVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFEC 951
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 486 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 532
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 533 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 589
Query: 1047 IDRSNARPEWV 1057
ID+ A PE V
Sbjct: 590 IDKPEANPERV 600
>gi|407713087|ref|YP_006833652.1| translation initiation factor IF-2 [Burkholderia phenoliruptrix
BR3459a]
gi|407235271|gb|AFT85470.1| translation initiation factor IF-2 [Burkholderia phenoliruptrix
BR3459a]
Length = 979
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/539 (64%), Positives = 444/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK++MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 415 MAVKASEVIKSMMKLGQMVTINQMLDQETAMIIVEELGHHAVAAKLDDPEAMLVEGEVSD 474
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 475 --AEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 532
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK GVPL+VAINKIDK
Sbjct: 533 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINKIDK 592
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 593 PEANPERVKQELVAEGVVPEEYGGDSPFVPVSAKTGSGIDDLLENVLLQAEVLELKAPVE 652
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 653 APAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKSAGP 712
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KARE+ LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 713 SIPVEIQGLSEVPQAGEEVIVMPDERKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMG 772
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ + +I+K DV GS+E L +SL LSTD+V++Q++H AVG I+ESD+NLA ASKA+
Sbjct: 773 EGEVQYMPLIVKADVQGSQEALVQSLLKLSTDEVRVQIVHGAVGGISESDVNLATASKAV 832
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + E+K+ ++ ++ EK+E + G E+RQ
Sbjct: 833 IIGFNTRADAQARKLAEANGVDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGTVEVRQ 892
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V K+ +AGC + +G ++R S +R+LRN +I+TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 893 VFKVPKIGAVAGCMVTDGFVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFEC 951
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 486 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 532
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 533 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGGVPLVVAINK 589
Query: 1047 IDRSNARPEWV 1057
ID+ A PE V
Sbjct: 590 IDKPEANPERV 600
>gi|390573197|ref|ZP_10253384.1| translation initiation factor IF-2 [Burkholderia terrae BS001]
gi|389934929|gb|EIM96870.1| translation initiation factor IF-2 [Burkholderia terrae BS001]
Length = 962
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/539 (64%), Positives = 443/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 398 MSVKASEVIKVMMKLGQMVTINQMLDQETAMIVVEELGHHAVAAKLDDPEAMLVEGEVSD 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 458 --APLLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVPL+VAINKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPLVVAINKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E V+PEEYGG SPF+S+SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 576 PDANPDRVKQELVAEGVVPEEYGGDSPFVSVSAKTGAGIDDLLENVLLQAEVLELKAPVE 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 636 APAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKAAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +++KARE+ LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 696 SIPVEIQGLSEVPAAGEEVIVMPDDRKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +I+K DV GS+E L +SL LS D+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 756 EGEVQYLPLIVKADVQGSQEALVQSLLKLSNDEVRVQIVHSAVGGISESDVNLATASKAV 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 816 IIGFNTRADAQARKLAETNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 876 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIHTGELDSLKRFKDDVKEVRQGFEC 934
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPLVVAINK 572
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 573 IDKPDANPDRV 583
>gi|420251912|ref|ZP_14755069.1| translation initiation factor IF-2 [Burkholderia sp. BT03]
gi|398056616|gb|EJL48602.1| translation initiation factor IF-2 [Burkholderia sp. BT03]
Length = 962
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/539 (64%), Positives = 443/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 398 MSVKASEVIKVMMKLGQMVTINQMLDQETAMIVVEELGHHAVAAKLDDPEAMLVEGEVSD 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 458 --APLLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVPL+VAINKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPLVVAINKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E V+PEEYGG SPF+S+SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 576 PDANPDRVKQELVAEGVVPEEYGGDSPFVSVSAKTGAGIDDLLENVLLQAEVLELKAPVE 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 636 APAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKAAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +++KARE+ LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 696 SIPVEIQGLSEVPAAGEEVIVMPDDRKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +I+K DV GS+E L +SL LS D+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 756 EGEVQYLPLIVKADVQGSQEALVQSLLKLSNDEVRVQIVHSAVGGISESDVNLATASKAV 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 816 IIGFNTRADAQARKLAETNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 876 VFKVPKVGTVAGCMVTDGVVKRSSSVRVLRNNVVIHTGELDSLKRFKDDVKEVRQGFEC 934
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPLVVAINK 572
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 573 IDKPDANPDRV 583
>gi|217970109|ref|YP_002355343.1| translation initiation factor IF-2 [Thauera sp. MZ1T]
gi|217507436|gb|ACK54447.1| translation initiation factor IF-2 [Thauera sp. MZ1T]
Length = 968
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/550 (64%), Positives = 447/550 (81%), Gaps = 1/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK LMK+G MVTINQVLDQETAMI+VEEMGH+A A+KL+DP++FL E +
Sbjct: 403 MAVKATEVIKVLMKMGSMVTINQVLDQETAMIIVEEMGHLAVAAKLDDPDAFL-EESEAH 461
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A+ L RAP+VT+MGHVDHGKTSLLDYIR+ V E GGITQHIGAY+V T G +TF
Sbjct: 462 KDADVLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEFGGITQHIGAYHVETARGMLTF 521
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK +GVPL+VAINKIDK
Sbjct: 522 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAAGVPLVVAINKIDK 581
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+ Q+LI+E VIPE YGG + F+ +SAK G GI++LLE + LQAE+LEL AP
Sbjct: 582 PDANPERVTQELIAESVIPEAYGGDTMFVPVSAKKGTGIDELLEAVLLQAEVLELTAPKD 641
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
TPAKG+IIE+RLDKG+GPVA++L+QSGTLR D+++AGA++GRIR+ML+ENGK I EAGP
Sbjct: 642 TPAKGLIIEARLDKGRGPVASLLVQSGTLRKGDVLLAGATFGRIRAMLDENGKQIDEAGP 701
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +G+E + +EKKAREI LFRQGKFRDVKL+KQ+ K E + ++
Sbjct: 702 SIPVEILGLSDVPSAGDEAIALADEKKAREIALFRQGKFRDVKLAKQQAAKLETLMEQMS 761
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK+L +IIK DV GS+E L +SL+ LSTD+V++ VIH AVG I+ESD+NLA AS A+
Sbjct: 762 EGEVKSLALIIKADVQGSQEALVQSLQKLSTDEVRVNVIHGAVGAISESDVNLAQASGAV 821
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ ++IRY+NIIY+ + E+K+ ++ ++ EK+E + GL EIRQ
Sbjct: 822 IIGFNTRADAGARKLAETFGVDIRYYNIIYDAVDEVKAALSGMLAPEKREEVTGLVEIRQ 881
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V ++KV IAGCY+LEG++RR+S +R+LRN ++WTGEL+SLKRFKD+VKEVK G+EC
Sbjct: 882 VFTISKVGSIAGCYVLEGVVRRNSHVRLLRNHTVLWTGELESLKRFKDDVKEVKFGYECG 941
Query: 541 RLSRIENQIQ 550
R N IQ
Sbjct: 942 LQLRNYNDIQ 951
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 24/136 (17%)
Query: 927 IIAHVDHGKTTLIDHLLRQ---SGTFRK-NQNINARIMDSNEIEKERGITIFSKNCSIEY 982
++ HVDHGKT+L+D++ R +G F Q+I A +E RG+ F
Sbjct: 475 VMGHVDHGKTSLLDYIRRAKVAAGEFGGITQHIGA-----YHVETARGMLTF-------- 521
Query: 983 NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
+DTPGH F R D V+L++ A +G MPQTR A G +V
Sbjct: 522 -------LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAAGVPLVV 574
Query: 1043 VVNKIDRSNARPEWVV 1058
+NKID+ +A PE V
Sbjct: 575 AINKIDKPDANPERVT 590
>gi|121609698|ref|YP_997505.1| GTP-binding protein TypA [Verminephrobacter eiseniae EF01-2]
gi|121554338|gb|ABM58487.1| GTP-binding protein TypA [Verminephrobacter eiseniae EF01-2]
Length = 607
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/600 (59%), Positives = 459/600 (76%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ I +MD+N IE+ERGITI +KNC++ + GT
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKIVDTVMDNNAIERERGITILAKNCAVSWRGT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD VLLLIDA EGPMPQTRFVT+KAL LG KPIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERALSMVDGVLLLIDAQEGPMPQTRFVTKKALALGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYA--NENSKARQG--NMI 1101
K+D+ A P+ VV+A FDLFDKL AT+EQLDFPV+Y S ++G+A E + Q +M
Sbjct: 129 KVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWAALEEGAPGEQWGPDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ +L++VP + PLQLQI +L++SS++G+IG+GRI G I+ +V +M GP+
Sbjct: 189 ALFDTVLRHVPAQAGDPAAPLQLQISALDFSSFVGRIGVGRISQGTIRPGMEVQVMQGPE 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
+ K +INQ+ F+GLDRV V +A G IVLI GI +I IG T+ D + P LPML +D
Sbjct: 249 GQSGKGRINQVLTFQGLDRVQVTQAGPGSIVLINGIADIGIGVTVTDSANPAPLPMLEVD 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTL +NF VN SPLAGREGK++T RQI +RL E+++N+ LRV + +D ++EV GRG
Sbjct: 309 EPTLIMNFCVNTSPLAGREGKYVTGRQIWDRLQKELQHNVALRVKETG-EDGVFEVVGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+ENMRREGYEL+VS+PRV++K + G EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLENMRREGYELAVSKPRVVYKDIGGVRCEPMELVTADIEETHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N++ + + RVRLEYRIP+RGLIGF NEF+ LTRGTGLIS++F+ Y P + +
Sbjct: 428 RGELVNMDSDGRGRVRLEYRIPARGLIGFTNEFLNLTRGTGLISNIFDGYEPH----RGE 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLI+ G+ Y+L KL DRGR+F+ ND VYEGMI+GIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLIAMDDGEIFTYALGKLDDRGRMFVRANDPVYEGMIVGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI +TLEY +EFI DDELVEITPK++RLRKR L+E+ERK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDLTLEYGVEFIEDDELVEITPKSVRLRKRHLRESERKR 603
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E I + N + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKIVDTVMDNNAIERERGITILAKNCAVSWRG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L++ A +G MPQTR A G+ IV +
Sbjct: 68 THINIVDTPGHADFGGEVERALSMVDGVLLLIDAQEGPMPQTRFVTKKALALGLKPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|418532449|ref|ZP_13098352.1| GTP-binding protein TypA [Comamonas testosteroni ATCC 11996]
gi|371450308|gb|EHN63357.1| GTP-binding protein TypA [Comamonas testosteroni ATCC 11996]
Length = 608
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/600 (58%), Positives = 463/600 (77%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD++ IE+ERGITI +KNC++ + T
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNHAIERERGITILAKNCAVSWKDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG +PIVVVN
Sbjct: 69 HINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS---KARQG-NMI 1101
K+D+ A P+ V++A FDLFDKL AT+EQLDFPV+Y S ++G++++ A+ G +M
Sbjct: 129 KVDKPGANPDKVINAAFDLFDKLGATDEQLDFPVVYASGINGWSSKEEGEPGAKWGEDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ IL +VP + +++ PLQLQ+ +L+YS+++G+IG+GRI G +K Q V +M GPD
Sbjct: 189 ALFDTILDHVPSVQGDASAPLQLQVSALDYSTFVGRIGVGRITQGTLKPGQQVAVMAGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K KINQ+ F+G+DRV EA +IVLI+GIE I IG T+ DP P LPML ID
Sbjct: 249 GKSYSGKINQVHTFQGIDRVQATEAGPSEIVLISGIENIGIGETVTDPVNPQPLPMLKID 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + +D I+EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELRSNVALRVKETD-EDGIFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+E MRREGYEL+VS+PRV+ + ++GE +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLEEMRREGYELAVSKPRVVMQMIDGEKHEPIELVTADIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLI+++F+ Y P K D
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLIANIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ D VYEGMIIGIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKAGDPVYEGMIIGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI ++LEY +EFI DDEL+EITP ++R+RKR LKE++RK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDLSLEYGVEFIEDDELLEITPTSLRVRKRHLKEHDRKR 603
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + + + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNHAIERERGITILAKNCAVSWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|221067733|ref|ZP_03543838.1| GTP-binding protein TypA [Comamonas testosteroni KF-1]
gi|220712756|gb|EED68124.1| GTP-binding protein TypA [Comamonas testosteroni KF-1]
Length = 608
Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/600 (58%), Positives = 463/600 (77%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LLRQSGTF +++ + +MD++ IE+ERGITI +KNC++ + T
Sbjct: 9 AIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNHAIERERGITILAKNCAVSWKDT 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER LSMVD V+LLIDA EGPMPQTRFVT+KAL LG +PIVVVN
Sbjct: 69 HINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS---KARQG-NMI 1101
K+D+ A P+ V++A FDLFDKL AT+EQLDFPV+Y S ++G++++ A+ G +M
Sbjct: 129 KVDKPGANPDKVINAAFDLFDKLGATDEQLDFPVVYASGINGWSSKEEGEPGAKWGEDMS 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
LF+ IL +VP + +++ PLQLQ+ +L+YS+++G+IG+GRI G +K Q V +M GPD
Sbjct: 189 ALFDTILDHVPSVQGDASAPLQLQVSALDYSTFVGRIGVGRITQGTLKPGQQVAVMAGPD 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
K KINQ+ F+G+DRV EA +IVLI+GIE I IG T+ DP P LPML ID
Sbjct: 249 GKTYSGKINQVHTFQGIDRVQATEAGPSEIVLISGIENIGIGETVTDPVNPQPLPMLKID 308
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPTLT+NF VN SPLAGREGKF+T+RQI +RL E+++N+ LRV + +D I+EVSGRG
Sbjct: 309 EPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELRSNVALRVKETD-EDGIFEVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHLTIL+E MRREGYEL+VS+PRV+ + ++GE +EP E + DIEE +QG +MQ L R
Sbjct: 368 ELHLTILLEEMRREGYELAVSKPRVVMQMIDGEKHEPIELVTADIEEGHQGGVMQALGER 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+L N+E + + RVRLEYRIP+RGLIGF NEF+ LTRG+GLI+++F+ Y P K D
Sbjct: 428 KGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLIANIFDSYEPH----KGD 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+G R+NGVLIS G+ Y+L KL DRGR+F+ D VYEGMIIGIHSRDNDL+VN +
Sbjct: 484 IGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVKAGDPVYEGMIIGIHSRDNDLVVNATR 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTN R SG ++AI++ PI ++LEY +EFI DDEL+EITP ++R+RKR LKE++RK+
Sbjct: 544 TKQLTNFRVSGKEDAIKITPPIDLSLEYGVEFIEDDELLEITPTSLRVRKRHLKEHDRKR 603
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F+E + + + + IT L
Sbjct: 8 IAIIAHVDHGKTTMVDQLLRQSGTFAEHEKVVDTVMDNHAIERERGITILAKNCAVSWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL++ A +G MPQTR A G+ IV +
Sbjct: 68 THINILDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLRPIVVV 127
Query: 176 NKIDKLDINLDRI 188
NK+DK N D++
Sbjct: 128 NKVDKPGANPDKV 140
>gi|295676261|ref|YP_003604785.1| translation initiation factor IF-2 [Burkholderia sp. CCGE1002]
gi|295436104|gb|ADG15274.1| translation initiation factor IF-2 [Burkholderia sp. CCGE1002]
Length = 975
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/539 (63%), Positives = 444/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 411 MAVKASEVIKVMMKLGQMVTINQMLDQETAMIIVEELGHRALAAKLDDPEAMLVEGEASD 470
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 471 --AEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 528
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVPL+VAINKIDK
Sbjct: 529 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPLVVAINKIDK 588
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 589 PEANPERVKQELVTEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 648
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 649 SPAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKSAGP 708
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KARE+ LFRQGKFRDVKL+KQ+ K E M +
Sbjct: 709 SIPVEIQGLSEVPQAGEEVIVMPDERKAREVALFRQGKFRDVKLAKQQAAKLETMLEQMG 768
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ + +I+K DV GS+E L +SL+ LSTD+V++Q++H AVG I+ESD+NLA ASKA+
Sbjct: 769 EGEVQYMPLIVKADVQGSQEALVQSLQKLSTDEVRVQIVHGAVGGISESDVNLATASKAV 828
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY+NIIY+ + ++K+ ++ ++ EK+E + G E+RQ
Sbjct: 829 IIGFNTRADAQARKLAEANGVDIRYYNIIYDAVDDVKAAMSGMLAPEKREVVTGTVEVRQ 888
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G ++R S +R+LRN +I+TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 889 VFKVPKVGTVAGCMVTDGFVKRSSSVRVLRNNVVIFTGELDSLKRFKDDVKEVRQGFEC 947
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 482 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 528
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 529 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPLVVAINK 585
Query: 1047 IDRSNARPEWV 1057
ID+ A PE V
Sbjct: 586 IDKPEANPERV 596
>gi|312796187|ref|YP_004029109.1| protein translation Initiation Factor 2 (IF-2) [Burkholderia
rhizoxinica HKI 454]
gi|312167962|emb|CBW74965.1| Bacterial Protein Translation Initiation Factor 2 (IF-2)
[Burkholderia rhizoxinica HKI 454]
Length = 976
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/539 (63%), Positives = 445/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK +MKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 412 MAVKASEVIKVMMKLGQMVTINQVLDQETAMIVVEELGHHALAAKLDDPEALLIE--GEV 469
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR V EAGGITQHIGAY+V T G ITF
Sbjct: 470 ADAEALPRPPVVTVMGHVDHGKTSLLDYIRTAKVAAGEAGGITQHIGAYHVETPRGVITF 529
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVP++VAINKIDK
Sbjct: 530 LDTPGHEAFTAMRARGAKSTDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINKIDK 589
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++E V+PEEYGG +PFI +SAKTG GI+ LLEN+ LQAE+LELKAP+
Sbjct: 590 PDANPDRVKQELVAEGVVPEEYGGDAPFIEVSAKTGQGIDDLLENVLLQAEVLELKAPIE 649
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+M +E GK AGP
Sbjct: 650 APAKGIVIEAKLDKGKGPVATILVQSGTLSRGDVVLAGSAYGRVRAMTDEFGKAAKSAGP 709
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+M +
Sbjct: 710 SIPVEIQGLSEVPNAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLESMLEQMG 769
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V+NL +I+K DV GS+E L +L+ LSTD+V++Q++H+AVG I+E+D+NLA ASKA+
Sbjct: 770 AGEVQNLPLIVKADVQGSQEALVHALQKLSTDEVRVQIVHSAVGGISETDVNLATASKAV 829
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA TR+LA+ N +++RY+NIIY+ + E+K+ ++ ++ EK+E ++G E+RQ
Sbjct: 830 IIGFNTRADAQTRRLAESNGVDLRYYNIIYDAVDEVKAAMSGMLAPEKREAVIGTVEVRQ 889
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R++ +R+LR+ +I TGELDSLKRFKD+VKEVK GFEC
Sbjct: 890 VFKVPKVGAVAGCMVTDGVVKRNASVRVLRDNVVIHTGELDSLKRFKDDVKEVKQGFEC 948
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ + I I + +E RG+ F
Sbjct: 483 VMGHVDHGKTSLLDYIRTAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 529
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 530 ---LDTPGHEAFTAMRARGAKSTDIVILVVAADDGVMPQTKEAISHAKAGGVPIVVAINK 586
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A P+ V + + + E D P I SA G
Sbjct: 587 IDKPDANPDRVKQEL--VAEGVVPEEYGGDAPFIEVSAKTG 625
>gi|386827897|ref|ZP_10115004.1| GTP-binding protein TypA/BipA [Beggiatoa alba B18LD]
gi|386428781|gb|EIJ42609.1| GTP-binding protein TypA/BipA [Beggiatoa alba B18LD]
Length = 607
Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/596 (59%), Positives = 458/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + N+ R+MDSN IEKERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLDERSNLGERVMDSNAIEKERGITILAKNTAIRWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KAL+ G +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKALQRGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D TFDLFD+L A E QLDFPVIY S L GYA S R G+M LFE
Sbjct: 129 KVDRDGARPDWVLDQTFDLFDRLGADEAQLDFPVIYASGLQGYAGLTSDIRGGDMQILFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++VP+ + + P QLQ+ +L+YSSY+G IGIGRI SGRIK+ V +++ +K
Sbjct: 189 AIIEHVPIPDVDPDEPFQLQVSALDYSSYVGIIGIGRISSGRIKTNTPVAVIDTKGEK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +I Q+ F GLDRV + EA +GDI+ TG++ + I TICDP+ LP L +DEPT+
Sbjct: 248 QGRILQVFGFHGLDRVEMPEATAGDIIAFTGLDPLYISDTICDPTHIVALPALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SPL+G++GK++T+RQI+ RL E+ +N+ LRV D + VSGRGELHL
Sbjct: 308 SMTFQVNTSPLSGQDGKYVTSRQIRERLQRELLHNVALRVADTDDPDK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL VSRP+VI K ++G +EP+E+L VD+EE +QG IM+ L R DL
Sbjct: 367 GILIENMRREGYELGVSRPQVITKIIDGVRHEPFESLTVDVEETHQGTIMELLGNRKADL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ IPSRGLIGF+ EF+T T GTGL+ H+F+ Y P S +G+R
Sbjct: 427 LNMTPDGKGRVRLDFEIPSRGLIGFRTEFLTATSGTGLLYHIFDHYGPMKAGS---IGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKAVAY+L+ LQ+RGRLF+ H D VYEGM+IGIHSR NDL+VNP+K KQL
Sbjct: 484 NNGVLIANGAGKAVAYALFTLQERGRLFVGHGDAVYEGMVIGIHSRSNDLVVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L PI+ +LE A+EFI+DDELVE+TPK +R+RK+ L EN+RK+
Sbjct: 544 TNIRAAGSDENILLTPPIRYSLEQALEFIDDDELVEVTPKAVRIRKQLLGENDRKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 21/141 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLDERSNLGERVMDSNAIEKERGITILAKNTAIRWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKALQRGLRPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQ 196
NK+D+ D + D + +Q
Sbjct: 128 NKVDR-----DGARPDWVLDQ 143
>gi|119898398|ref|YP_933611.1| translation initiation factor IF-2 [Azoarcus sp. BH72]
gi|189028281|sp|A1K7B9.1|IF2_AZOSB RecName: Full=Translation initiation factor IF-2
gi|119670811|emb|CAL94724.1| translation initiation factor IF-2 [Azoarcus sp. BH72]
Length = 940
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/539 (64%), Positives = 443/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMK+G MVTINQVLDQETAMI+VEE+GH A A+KL+DP++FL E + +
Sbjct: 375 MSVKATEVIKTLMKMGSMVTINQVLDQETAMIVVEELGHKALAAKLDDPDAFL-EETDAH 433
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 434 KDAELLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 493
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LV AADDGVMPQTREAI HAK +GVP++VAI KIDK
Sbjct: 494 LDTPGHEAFTAMRARGAKATDIVILVCAADDGVMPQTREAIHHAKAAGVPVVVAITKIDK 553
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L+SE VIPEEYGG + F+ +SAKTG G+++LLE + LQAE+LEL A V
Sbjct: 554 PEANAERVKQELVSESVIPEEYGGDTMFVPVSAKTGTGVDELLEAVLLQAEVLELTAAVD 613
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+GPVA++L+QSGTLR D+++ GA++GRIR+ML+ENGK + EAGP
Sbjct: 614 APAKGLIVEARLDKGRGPVASLLVQSGTLRKGDVLLVGATFGRIRAMLDENGKPVDEAGP 673
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +G+E V+ +EKKAREI LFRQGKFRDVKL+KQ+ K E+MF +
Sbjct: 674 SIPVEILGLSDVPAAGDEAIVLGDEKKAREIALFRQGKFRDVKLAKQQAAKLESMFEQMA 733
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK+L +IIK DV GS+E L +SL LS D+V++ VIH AVG I+ESD+NLA AS A+
Sbjct: 734 EGEVKSLPLIIKADVQGSQEALAQSLAKLSNDEVRVNVIHGAVGAISESDVNLAQASGAV 793
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ ++IRY+NIIY+ + E+KS ++ ++ EK+E ++G+ EIRQ
Sbjct: 794 IIGFNTRADAGARKLAESFGVDIRYYNIIYDAVDEVKSALSGMLAPEKREEVIGMVEIRQ 853
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V ++KV +AGCY+LEGL++R S +R++RN ++WTGEL+SLKRFKD+VKEVK G+EC
Sbjct: 854 VFTISKVGSVAGCYVLEGLVKRGSSVRLIRNHTVVWTGELESLKRFKDDVKEVKFGYEC 912
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 447 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 493
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQTR A G +V + K
Sbjct: 494 ---LDTPGHEAFTAMRARGAKATDIVILVCAADDGVMPQTREAIHHAKAAGVPVVVAITK 550
Query: 1047 IDRSNARPEWV 1057
ID+ A E V
Sbjct: 551 IDKPEANAERV 561
>gi|186476487|ref|YP_001857957.1| translation initiation factor IF-2 [Burkholderia phymatum STM815]
gi|238691326|sp|B2JKT4.1|IF2_BURP8 RecName: Full=Translation initiation factor IF-2
gi|184192946|gb|ACC70911.1| translation initiation factor IF-2 [Burkholderia phymatum STM815]
Length = 965
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/539 (64%), Positives = 442/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MKLGQMVTINQ+LDQETAMI+VEE+GH A A+KL+DPE+ L+ +
Sbjct: 401 MSVKASEVIKVMMKLGQMVTINQMLDQETAMIVVEELGHHAVAAKLDDPEAMLVEGEASD 460
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 461 --APQLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVITF 518
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK GVPL+VAINKIDK
Sbjct: 519 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPLVVAINKIDK 578
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E V+PEEYGG SPF+ +SAKTG GI+ LLEN+ LQAE+LELKAPV
Sbjct: 579 PEANPERVKQELVAEGVVPEEYGGDSPFVPVSAKTGAGIDDLLENVLLQAEVLELKAPVE 638
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK AGP
Sbjct: 639 APAKGLVIEAKLDKGKGPVATILVQSGTLNRGDVVLAGSAYGRVRAMLDETGKPTKAAGP 698
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +++KARE+ LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 699 SIPVEIQGLSEVPAAGEEVIVMPDDRKAREVALFRQGKFRDVKLAKQQAAKLENMLEQMG 758
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +I+K DV GS+E L +SL LS D+V++Q++H+AVG I+ESD+NLA ASKA+
Sbjct: 759 EGEVQYLPLIVKADVQGSQEALVQSLLKLSNDEVRVQIVHSAVGGISESDVNLATASKAV 818
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EK+E + G+ E+RQ
Sbjct: 819 IIGFNTRADAQARKLAESNGIDIRYYNIIYDAVDEVKAAMSGMLAPEKREVVTGMVEVRQ 878
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGC + +G+++R S +R+LRN +I TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 879 VFKVPKVGAVAGCMVTDGVVKRTSSVRVLRNNVVIHTGELDSLKRFKDDVKEVRQGFEC 937
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 472 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVITF------------ 518
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 519 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAGGVPLVVAINK 575
Query: 1047 IDRSNARPEWV 1057
ID+ A PE V
Sbjct: 576 IDKPEANPERV 586
>gi|77164239|ref|YP_342764.1| GTP-binding protein TypA [Nitrosococcus oceani ATCC 19707]
gi|254435565|ref|ZP_05049072.1| GTP-binding protein TypA/BipA [Nitrosococcus oceani AFC27]
gi|76882553|gb|ABA57234.1| GTP-binding protein TypA [Nitrosococcus oceani ATCC 19707]
gi|207088676|gb|EDZ65948.1| GTP-binding protein TypA/BipA [Nitrosococcus oceani AFC27]
Length = 609
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 460/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + + + R++DSN++E+ERGITI +KN +IE+NG
Sbjct: 9 AIIAHVDHGKTTLVDQLLKQSGTFDEWETVAERVLDSNDLERERGITILAKNTAIEWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KA LG +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTQKAFALGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +RP WV+D TFDLFD+L ATEEQLDFPV+Y SAL GY + + R G+M PLF+
Sbjct: 129 KIDRPGSRPNWVLDQTFDLFDRLGATEEQLDFPVVYASALQGYGALSPEVRTGDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ VP + N P Q+QI SL+YS Y+G IGIGRI G + + V I++ +
Sbjct: 189 TIVQCVPPPRVNLEGPFQMQISSLDYSPYVGVIGIGRIQRGAVSTNTPVEILDREGQR-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ ++ Q+ F+GL+RV V EA +GDI+ ++GI+ + I T+CDP++ GLP L +DEPT+
Sbjct: 248 RGRVLQVMGFRGLERVEVPEAQAGDIIAVSGIDNLRISDTLCDPAQVEGLPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP GR+GK++T+RQ++ RL E+ +N+ LRV + + D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFVGRDGKYVTSRQLRERLLRELIHNVALRVEEGEDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL VSRP VI K + GEL EPYE L VD+EE +QG +M+KL R GDL
Sbjct: 367 SILIENMRREGYELGVSRPEVIAKEIEGELCEPYEQLVVDVEEQHQGAVMEKLGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVRLEY I SRGLIGFQ EF+T T GTGL+ HVF+ Y P K + R
Sbjct: 427 VDMVPDGKGRVRLEYSILSRGLIGFQTEFLTATSGTGLMHHVFDRYGPI---KKGTIAHR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL++ GKA+ Y+L+ LQ+RGRL I VYEGMIIGIHSR+NDL+VNP+K KQL
Sbjct: 484 KNGVLVANGVGKALGYALFNLQERGRLLIGPGTEVYEGMIIGIHSRENDLVVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L P++++LE A+EFI+DDELVE+TP++IRLRK+FL E+ERK+
Sbjct: 544 TNIRAAGSDENILLTPPLRLSLEQALEFIDDDELVEVTPEHIRLRKKFLLEHERKR 599
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLKQSGTFDEWETVAERVLDSNDLERERGITILAKNTAIEWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTQKAFALGLRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|337755210|ref|YP_004647721.1| GTP-binding protein TypA [Francisella sp. TX077308]
gi|336446815|gb|AEI36121.1| GTP-binding protein TypA/BipA [Francisella sp. TX077308]
Length = 605
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/596 (59%), Positives = 460/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLNTRGPEVERVMDSNDIEKERGITILAKNTALKWNNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD+L AT+EQLDFP+IY SA++G+A ++ +M LF+
Sbjct: 129 KIDRDGARPDWVVDQVFDLFDRLGATDEQLDFPIIYASAINGWATNELGEQKEDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + N P Q+QI SL+YS++ G IGIGRI G++K+ V I+ G D K
Sbjct: 189 AIVENVEHPAVDENGPFQMQISSLDYSNFTGTIGIGRIQRGKVKTNTPVTIV-GKDGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+RV V EA +GDIV +TG+E + I T+C P K LP L++DEPT+
Sbjct: 248 NGRVLQILGYMGLERVEVPEAQAGDIVCVTGMEGLNISDTLCSPDKVEALPELSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK+RLD E+ N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKDRLDKELLTNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREGYE++VSRP VIFK ++GE +EPYE +DIEE +QG +M+++ R G+L
Sbjct: 367 SILLENMRREGYEIAVSRPHVIFKDVDGEKHEPYEQAIIDIEEEHQGTVMERMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQTLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S +GKAVA++LW LQ+RG++FI+H VYEGMIIGIHSRDNDL VNP K KQL
Sbjct: 484 QNGTLVSMLAGKAVAFALWNLQERGKMFISHGTDVYEGMIIGIHSRDNDLAVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG D+A+ L++PIK+TLEYA+EFI DDELVEITP++IRLRK+ L E++RKK
Sbjct: 544 TNVRASGKDDALTLVTPIKLTLEYALEFIEDDELVEITPESIRLRKKHLTESDRKK 599
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 77/177 (43%), Gaps = 28/177 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLNTRGPEVERVMDSNDIEKERGITILAKNTALKWNN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAQGLKPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQVIP--EEYGGAS-----PFISISAKTGVGINKLLEN 225
NKID+ D + D + +QV + G P I SA G N+L E
Sbjct: 128 NKIDR-----DGARPDWVVDQVFDLFDRLGATDEQLDFPIIYASAINGWATNELGEQ 179
>gi|161870045|ref|YP_001599214.1| GTP-binding protein [Neisseria meningitidis 053442]
gi|161595598|gb|ABX73258.1| GTP-binding protein [Neisseria meningitidis 053442]
Length = 562
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/567 (61%), Positives = 449/567 (79%), Gaps = 6/567 (1%)
Query: 960 MDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAV 1019
MDSN++EKERGITI +KN +I+Y G INI+DTPGHADFGGEVER+L MVD V+LL+DA
Sbjct: 1 MDSNDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQ 60
Query: 1020 EGPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
EGPMPQTRFVT+KAL LG KPIVV+NKID+ +ARP WV+D TF+LFD L AT+EQLDFP+
Sbjct: 61 EGPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFPI 120
Query: 1080 IYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIG 1139
+Y S L G+A +M PLF+ ILKY P +++ LQLQI L+Y +Y G++G
Sbjct: 121 VYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTGRLG 180
Query: 1140 IGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEE 1199
IGRIL+GRIK Q V +MN + + + +INQ+ FKGL+RV + EA +GDIV+I+GIE+
Sbjct: 181 IGRILNGRIKPGQTVAVMNH-EQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIISGIED 239
Query: 1200 ICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKN 1259
I IG TI D P GLPML++DEPTLT++FMVN SPLAG EGKF+T+RQI++RL E+
Sbjct: 240 IGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRLQKELLT 299
Query: 1260 NIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPY 1319
N+ LRV ++ D ++ VSGRGELHLTIL+ENMRREGYEL+V +PRV+++ ++G+ EPY
Sbjct: 300 NVALRV-EDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDIDGQKCEPY 358
Query: 1320 ENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTR 1379
ENL VD+ + NQG +M++L R G+L N+E + R RLEY IP+RGLIGFQ EF+TLTR
Sbjct: 359 ENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGFQGEFMTLTR 418
Query: 1380 GTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDL 1439
G GL+SHVF++YAP K D+ R NGVL+SQ G+AVAY+LW L+DRGR+F++ ND
Sbjct: 419 GVGLMSHVFDDYAPV----KPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRMFVSPNDK 474
Query: 1440 VYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDEL 1499
+YEGMIIGIHSRDNDL+VNP+K K+LTNIR+SG+DEA++L +PIK+TLE A+EFI+DDEL
Sbjct: 475 IYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGAVEFIDDDEL 534
Query: 1500 VEITPKNIRLRKRFLKENERKKKLHKF 1526
VEITP++IRLRKR+L E ER++ K
Sbjct: 535 VEITPQSIRLRKRYLSELERRRHFKKL 561
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 35/63 (55%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +DTPGH F R + D VVL+V A +G MPQTR A G+ IV INK
Sbjct: 28 INIVDTPGHADFGGEVERVLGMVDCVVLLVDAQEGPMPQTRFVTKKALALGLKPIVVINK 87
Query: 178 IDK 180
IDK
Sbjct: 88 IDK 90
>gi|335043326|ref|ZP_08536353.1| putative membrane GTPase involved in stress response [Methylophaga
aminisulfidivorans MP]
gi|333789940|gb|EGL55822.1| putative membrane GTPase involved in stress response [Methylophaga
aminisulfidivorans MP]
Length = 609
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/596 (59%), Positives = 460/596 (77%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +++ + R+MDSN++E+ERGITI SKN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDQLLRQSGTFGEHEELTERVMDSNDLERERGITILSKNTAIRWNDY 73
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+D+ EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 74 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDSSEGPMPQTRFVTQKALALGLKPIVVIN 133
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP+WV+D TFDLF L AT+ QLDF VIY S L+G+A R G+M PLFE
Sbjct: 134 KIDKPSARPDWVLDQTFDLFVNLDATDAQLDFDVIYASGLNGFAGMEDTVRGGDMTPLFE 193
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V +++ P ++Q+ SL+Y+SY+G IG+GRI GR+K+ V +++ K N
Sbjct: 194 LIVDRVSHPDVDADGPFRMQVSSLDYNSYVGVIGVGRIERGRVKTNTPVTVVDREGKKRN 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GL R V EA +GDI+ TG++ + I T+CDPS LP L++DEPT+
Sbjct: 254 -GRVQQVMGFLGLQREEVAEAQAGDIIAFTGLDPLNISDTLCDPSAVEALPPLSVDEPTV 312
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP AG++GKFITTRQIK RLD E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 313 TMTFQVNNSPFAGKDGKFITTRQIKERLDRELIHNVALRVEQVPTDPDKFKVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL VSRP VI + ++G EP+E++ +DIEE +QG +M+K+ RG DL
Sbjct: 373 SVLIENMRREGFELGVSRPEVIIREVDGVKEEPFESVTIDIEEEHQGTVMEKMGERGADL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL++ IPSRGLIGF+ EF+T T+GTGLI VF+ YAP S GKR
Sbjct: 433 KNMVPDGKGRVRLDFIIPSRGLIGFRTEFLTATQGTGLIYSVFDHYAPMKAGS---FGKR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKAVA++++ LQDRGR+FI H D VYEGM+IGIHSRDNDL+VNP+K KQL
Sbjct: 490 INGVLIANGVGKAVAFAIFNLQDRGRMFIGHGDEVYEGMVIGIHSRDNDLVVNPLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSDEA+ L+ PI+++LE A+EFI DDEL+E+TPK IR+RK+FL E+ERK+
Sbjct: 550 TNMRASGSDEAVTLVPPIRMSLEQALEFIGDDELLEVTPKAIRVRKKFLLEHERKR 605
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E +T+ + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDQLLRQSGTFGEHEELTERVMDSNDLERERGITILSKNTAIRWND 72
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V + +G MPQTR A G+ IV I
Sbjct: 73 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDSSEGPMPQTRFVTQKALALGLKPIVVI 132
Query: 176 NKIDK 180
NKIDK
Sbjct: 133 NKIDK 137
>gi|319944109|ref|ZP_08018387.1| translation initiation factor IF-2 [Lautropia mirabilis ATCC 51599]
gi|319742603|gb|EFV95012.1| translation initiation factor IF-2 [Lautropia mirabilis ATCC 51599]
Length = 1014
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/539 (62%), Positives = 435/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK LMKLGQMVTINQVLDQETAMILVEEMGH A A+KL+DPE+ +L+E
Sbjct: 439 MAVKATEVIKQLMKLGQMVTINQVLDQETAMILVEEMGHTAIAAKLDDPEA-MLDEVATE 497
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
++ R P+VT+MGHVDHGKTSLLDY+R+T V EAGGITQHIGAY+V T G +TF
Sbjct: 498 DVGPAVPRPPVVTVMGHVDHGKTSLLDYLRRTKVASGEAGGITQHIGAYHVKTPRGVVTF 557
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AFTAMRARGAK TDIV+LVVAADDGVMPQT EAI+HA+ + VPL+VAI KIDK
Sbjct: 558 LDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTIEAISHARAAEVPLVVAITKIDK 617
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR++Q+L+++ V+PEEYGG PF+ +SAKTG GI+ LLEN+ LQAEILEL+AP
Sbjct: 618 PEANPDRVRQELVAQSVVPEEYGGDVPFVGVSAKTGQGIDDLLENVLLQAEILELRAPEK 677
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G++IE+RLDKG+GPVATVL+QSGTL D V+ G+++GR+R+M++E GKN A P
Sbjct: 678 APARGLVIEARLDKGRGPVATVLVQSGTLSRGDTVLVGSTWGRVRAMMDEAGKNAASATP 737
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL VP +GEEL + +E+KAREI LFRQGKFRDVKL++Q+ K ENMF+ I
Sbjct: 738 SIPVEIQGLNDVPQAGEELIALADERKAREIALFRQGKFRDVKLARQQAAKLENMFDQIG 797
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +IIK DV GS+E L +L LS ++K+Q++H VG I ESDINLAIASKA+
Sbjct: 798 EGEVQTLPLIIKADVQGSQEALAHALLKLSNAEIKVQIVHAQVGGITESDINLAIASKAV 857
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRAD R++A+ N I++RY+NIIY+ + ++KS + ++ EK+E +LG+ EIRQ
Sbjct: 858 VIGFNVRADQPARRMAETNGIDLRYYNIIYDAVDDVKSAMEGMLSPEKRETMLGMVEIRQ 917
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGCY+ EGL+RRDS++R+LR+ +IWTG ++SLKRFKD+ KEVKAGFEC
Sbjct: 918 VFRVTKVGTVAGCYVTEGLVRRDSEVRLLRDSTVIWTGRIESLKRFKDDAKEVKAGFEC 976
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D+L R + I I + ++ RG+ F
Sbjct: 511 VMGHVDHGKTSLLDYLRRTKVASGEAGGITQHI-GAYHVKTPRGVVTF------------ 557
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGHA F R D V+L++ A +G MPQT A +V + K
Sbjct: 558 ---LDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTIEAISHARAAEVPLVVAITK 614
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEE-QLDFPVIYTSALHG 1087
ID+ A P+ V +L + EE D P + SA G
Sbjct: 615 IDKPEANPDRVRQ---ELVAQSVVPEEYGGDVPFVGVSAKTG 653
>gi|393759245|ref|ZP_10348061.1| translation initiation factor IF-2 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162473|gb|EJC62531.1| translation initiation factor IF-2 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 1017
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/550 (63%), Positives = 456/550 (82%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK+LMKLGQMVTINQVLDQETAMILVEE+GH A A+KL+DPE+FL++ +N
Sbjct: 453 MAVKAAEVIKHLMKLGQMVTINQVLDQETAMILVEELGHKAIAAKLDDPEAFLVDTDAQN 512
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE RAP+VT+MGHVDHGKTSLLDYIR+ + EAGGITQHIGAYNV T G+ TF
Sbjct: 513 -DAELKPRAPVVTVMGHVDHGKTSLLDYIRRAKIASGEAGGITQHIGAYNVKTARGTATF 571
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARG K TD+V+LVVAADDGVMPQTREAI HA+ +GVPL+VAINKIDK
Sbjct: 572 LDTPGHEAFTAMRARGTKATDVVILVVAADDGVMPQTREAIHHARAAGVPLVVAINKIDK 631
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PFI +SAKTG GI++LLEN+ LQAE+LELKAPV
Sbjct: 632 PEANPERVKQELVAEEVVPEEYGGDVPFIPVSAKTGQGIDELLENVLLQAEMLELKAPVD 691
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG +IE+RLDKG+GPVAT+L+QSGTL D V+ GAS+GR+R+MLNE GK++ AGP
Sbjct: 692 APAKGTVIEARLDKGRGPVATILVQSGTLNRGDSVLVGASFGRVRAMLNETGKSLTSAGP 751
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKLS+Q+ K E+MF+++
Sbjct: 752 SIPVEIQGLTEVPAAGDELVVMADERKAREIALFRQGKFRDVKLSRQQAAKLESMFDNLG 811
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E ++ L +IIKTDV GS+E L +SL LSTD+V++ V+H AVG I+ESD+NLAIAS A+
Sbjct: 812 -EGMQTLSLIIKTDVQGSQEALVQSLVKLSTDEVRVVVVHAAVGGISESDVNLAIASNAV 870
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ E++E ++G+ EIR+
Sbjct: 871 VIGFNVRAEQSAKKLAEANGIDLRYYNIIYDAVDEVKAALSGMLAPEQREEIIGMVEIRE 930
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V V+++ IAGC + EG++RRDS++R+LRN + WTG LDSL+RFKD+ KEV++GF+C
Sbjct: 931 VYNVSRIGNIAGCMVTEGVVRRDSQVRLLRNNVVHWTGYLDSLRRFKDDAKEVRSGFDCG 990
Query: 541 RLSRIENQIQ 550
R N IQ
Sbjct: 991 ITLRGNNDIQ 1000
Score = 70.1 bits (170), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I N ++ RG F
Sbjct: 525 VMGHVDHGKTSLLDYIRRAKIASGEAGGITQHIGAYN-VKTARGTATF------------ 571
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V +NK
Sbjct: 572 ---LDTPGHEAFTAMRARGTKATDVVILVVAADDGVMPQTREAIHHARAAGVPLVVAINK 628
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P I SA G
Sbjct: 629 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFIPVSAKTG 667
>gi|350544085|ref|ZP_08913740.1| Translation initiation factor 2 [Candidatus Burkholderia kirkii
UZHbot1]
gi|350528136|emb|CCD36422.1| Translation initiation factor 2 [Candidatus Burkholderia kirkii
UZHbot1]
Length = 983
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/539 (64%), Positives = 443/539 (82%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MKLGQMVTINQVLDQETAMI+VEE+GH A A+KL+DPE+ L+
Sbjct: 417 MSVKASEVIKVMMKLGQMVTINQVLDQETAMIVVEELGHRAVAAKLDDPEALLIEGEAAE 476
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
TAE L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 477 ETAEKLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVDTPRGVITF 536
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHA+ GVP++VAINKIDK
Sbjct: 537 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHARAGGVPIVVAINKIDK 596
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E V+ EEYGG SPFI +SAKTG GI+ LLEN+SLQAE+LEL APV
Sbjct: 597 PEANPERVKQELVAEGVVLEEYGGDSPFIEVSAKTGRGIDDLLENVSLQAEVLELTAPVE 656
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKGKGPVAT+L+QSGTL D+V+AG++YGR+R+ML+E GK+ AGP
Sbjct: 657 AAAKGLVIEAKLDKGKGPVATILVQSGTLSRGDVVLAGSAYGRVRAMLDETGKSTKSAGP 716
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENM +
Sbjct: 717 SIPVEIQGLSEVPAAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLENMLEQMG 776
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +I+K DV GS+E L +SL+ LST++V++Q++H+AVG I+ESD+NLA SKA+
Sbjct: 777 EGEVQNLPLIVKADVQGSQEALVQSLQKLSTNEVRVQIVHSAVGAISESDVNLATTSKAV 836
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N I+I Y+NIIY+ + E+K+ ++ ++ EK+E + + E+RQ
Sbjct: 837 IIGFNTRADAQARKLAEANGIDIHYYNIIYDAVDEVKAAMSCMLAPEKRETVTCMVEVRQ 896
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V KV IAGC + +G+++R S +R++RN +I TGELDSLKRFKD+VKEV+ GFEC
Sbjct: 897 VIRVPKVGLIAGCMVTDGVVKRTSSVRVIRNNVVIHTGELDSLKRFKDDVKEVRQGFEC 955
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 490 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVDTPRGVITF------------ 536
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 537 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHARAGGVPIVVAINK 593
Query: 1047 IDRSNARPEWV 1057
ID+ A PE V
Sbjct: 594 IDKPEANPERV 604
>gi|334130024|ref|ZP_08503827.1| Translation initiation factor IF-2 [Methyloversatilis universalis
FAM5]
gi|333445060|gb|EGK73003.1| Translation initiation factor IF-2 [Methyloversatilis universalis
FAM5]
Length = 921
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/564 (62%), Positives = 449/564 (79%), Gaps = 3/564 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K++ +IK LMKLGQMVTINQVLDQETAMILVEEMGH A +KL+DPE+FL + +
Sbjct: 354 MAIKATELIKALMKLGQMVTINQVLDQETAMILVEEMGHTAKPAKLDDPEAFLGEADDAH 413
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 414 KDVEVLPRAPVVTVMGHVDHGKTSLLDYIRRARVAAGEAGGITQHIGAYHVDTPRGMITF 473
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TD+V+LVVAADDGVMPQTREAI HAK +GVP++VAINKIDK
Sbjct: 474 LDTPGHEAFTAMRARGAKATDLVILVVAADDGVMPQTREAIHHAKAAGVPMVVAINKIDK 533
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++E V+PEEYGG SPFI +SAK G GI++LLEN+ LQAE+LELKAP
Sbjct: 534 PEANPDRVKQELVAEGVVPEEYGGDSPFIPVSAKKGTGIDELLENVLLQAEVLELKAPKD 593
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G++IE+RLDKGKGPVA+VL+QSGTL+ DI++ G +GR+R+ML+E+GK + EAGP
Sbjct: 594 APARGLVIEARLDKGKGPVASVLVQSGTLKRGDILLCGQVFGRVRAMLDESGKAVTEAGP 653
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +G+E V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+MF +
Sbjct: 654 SIPVEIQGLSDVPAAGDEAMVLADERKAREIALFRQGKFRDVKLAKQQAAKLESMFEQMG 713
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +IIK DV GS+E L +SL+ LSTD+V++QVIH AVG I+E+D+NLA ASKA+
Sbjct: 714 EGEVRVLPLIIKADVQGSQEALVQSLQKLSTDEVRVQVIHAAVGAISETDVNLAQASKAV 773
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
++GFNVRAD RKLA+ +++RY+ IIY + E+K+ ++ ++ EK+E +LG EIRQ
Sbjct: 774 VVGFNVRADVGARKLAENYGVDLRYYTIIYEAVDEVKAALSGMLAPEKRELVLGTVEIRQ 833
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V K+ IAGC + GL++R + R+LRN ++WTGEL+SLKRFKD+VKEVK +EC
Sbjct: 834 VFRGTKIGTIAGCMVTSGLVKRGASARLLRNNVVVWTGELESLKRFKDDVKEVKENYECG 893
Query: 541 RLSRIENQIQR-DISEIIAFDIQN 563
R N+I+ D EI F+IQ
Sbjct: 894 IQLRGYNEIEEGDQLEI--FEIQE 915
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 427 VMGHVDHGKTSLLDYIRRARVAAGEAGGITQHI-GAYHVDTPRGMITF------------ 473
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V +NK
Sbjct: 474 ---LDTPGHEAFTAMRARGAKATDLVILVVAADDGVMPQTREAIHHAKAAGVPMVVAINK 530
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A P+ V + + + E D P I SA G
Sbjct: 531 IDKPEANPDRVKQEL--VAEGVVPEEYGGDSPFIPVSAKKG 569
>gi|149926271|ref|ZP_01914533.1| translation initiation factor IF-2 [Limnobacter sp. MED105]
gi|149825089|gb|EDM84301.1| translation initiation factor IF-2 [Limnobacter sp. MED105]
Length = 943
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/539 (63%), Positives = 441/539 (81%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMK+GQMVTINQVLDQ+TAMI+ EE+GH A A+KL+DPE+ + +
Sbjct: 376 MSVKAAEVIKCLMKMGQMVTINQVLDQDTAMIVTEELGHRAIAAKLDDPEAMIEEAGVAH 435
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A S+ RAP+VT+MGHVDHGKTSLLDYIR V EAGGITQHIGAY+V T G ITF
Sbjct: 436 SEAPSVPRAPVVTVMGHVDHGKTSLLDYIRSAKVASGEAGGITQHIGAYHVETERGMITF 495
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVV+ADDGVMPQT EAI HAK +GVPL+VAINKIDK
Sbjct: 496 LDTPGHEAFTAMRARGAKATDIVILVVSADDGVMPQTIEAIHHAKAAGVPLVVAINKIDK 555
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+LIS V+PEEYGG SP + +SAKTG GI+ LLE + LQAE++ELKA V
Sbjct: 556 PDSNPERVKQELISHSVVPEEYGGDSPMVPVSAKTGKGIDDLLEQVLLQAEVMELKAQVE 615
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++ESRLDKG+GPVATVL+QSGTL+ D+V+AG+++GR+R+M++ENG++I AGP
Sbjct: 616 APAKGLVVESRLDKGRGPVATVLVQSGTLKKGDVVLAGSAFGRVRAMVDENGRSIDSAGP 675
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENMF +
Sbjct: 676 SIPVEIQGLSDVPAAGEEVIVLPDERKAREIALFRQGKFRDVKLAKQQAAKLENMFEQMA 735
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK+L +I+K DV GS+E L+ +L+ LSTD+VK+QV+H AVG I+ESD+NLA+ASKA+
Sbjct: 736 EGEVKSLAVILKADVQGSQEALSHALQKLSTDEVKVQVVHAAVGGISESDVNLAVASKAV 795
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRAD RK A+ N ++IRY+NIIY+ + EIK+ +T ++ +KKE ++G EIR+
Sbjct: 796 IIGFNVRADQGARKTAENNGVDIRYYNIIYDAVDEIKAAMTGMLTPDKKEEIIGNVEIRE 855
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V ++KV +AGC + +G+IRR + +R+LR+ ++WTG+L SLKRFKD+ KEV+ FEC
Sbjct: 856 VYKISKVGSVAGCMVTDGVIRRGAGVRLLRDNVVVWTGQLASLKRFKDDAKEVRQNFEC 914
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ + I I + +E ERG+ F
Sbjct: 449 VMGHVDHGKTSLLDYIRSAKVASGEAGGITQHI-GAYHVETERGMITF------------ 495
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V +NK
Sbjct: 496 ---LDTPGHEAFTAMRARGAKATDIVILVVSADDGVMPQTIEAIHHAKAAGVPLVVAINK 552
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEE-QLDFPVIYTSALHG 1087
ID+ ++ PE V +L EE D P++ SA G
Sbjct: 553 IDKPDSNPERV---KQELISHSVVPEEYGGDSPMVPVSAKTG 591
>gi|358637264|dbj|BAL24561.1| translation initiation factor IF-2 [Azoarcus sp. KH32C]
Length = 948
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/539 (64%), Positives = 442/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK LMK+G MVTINQVLDQETAMILVEE+GH A A+KL+DP++FL + + +
Sbjct: 383 MAVKATEVIKALMKMGSMVTINQVLDQETAMILVEELGHKAVAAKLDDPDAFLADADSMH 442
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T+ G +TF
Sbjct: 443 DATEE-PRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETDRGMLTF 501
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HA+ +GVPL+VA+NKIDK
Sbjct: 502 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAQAAGVPLVVAVNKIDK 561
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+LI+E V+PEE+GG FI++SAKTG GI++LLE + LQAE+LELKAP
Sbjct: 562 HDANPERVKQELIAEGVVPEEFGGEVMFINVSAKTGQGIDELLEGVLLQAEVLELKAPAD 621
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKG+IIE+RLDKG+GPVAT+L+QSGTLR DI++ GA++GRIR+ML+ENGK I EAGP
Sbjct: 622 SPAKGLIIEARLDKGRGPVATMLVQSGTLRKGDIMLVGATFGRIRAMLDENGKAIDEAGP 681
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVE+ GL VP +G+E V+ +EKKAREI LFRQGKFR+VKL+KQ+ K E+MF ++
Sbjct: 682 SIPVEVLGLADVPAAGDEAIVLADEKKAREIALFRQGKFREVKLAKQQAAKLESMFEQMS 741
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +I+K DV GS+E L ++L LSTD+V++ IH VG I ESD+NLA AS A+
Sbjct: 742 EGEVKTLPLIVKADVQGSQEALVQALNKLSTDEVRVNAIHAGVGGITESDVNLAQASGAV 801
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ ++IRY+NIIY+ + E+K+ ++ L+ E++EN LGL E+RQ
Sbjct: 802 IIGFNTRADAGARKLAENFGVDIRYYNIIYDAVDEVKAALSGLLAPERRENALGLVEVRQ 861
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V KV +AGCY+LEGL++R S+IR+LR+ +I TGEL+SLKRFKD+VKEVK GFEC
Sbjct: 862 VFRVPKVGAVAGCYVLEGLVKRGSQIRVLRDNVVIHTGELESLKRFKDDVKEVKFGFEC 920
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 455 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETDRGMLTF------------ 501
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G +V VNK
Sbjct: 502 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAQAAGVPLVVAVNK 558
Query: 1047 IDRSNARPEWV 1057
ID+ +A PE V
Sbjct: 559 IDKHDANPERV 569
>gi|357403460|ref|YP_004915384.1| GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A)
[Methylomicrobium alcaliphilum 20Z]
gi|351716125|emb|CCE21776.1| GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A)
[Methylomicrobium alcaliphilum 20Z]
Length = 606
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/596 (58%), Positives = 464/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF+ ++ ++ RIMDSN+IEKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFKSHEKVSERIMDSNDIEKERGITILAKNTALDWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD TFDLFD+L AT+EQLDFP++Y SAL+GYA+ ++ A G+M PLFE
Sbjct: 129 KIDRPGARPDWVVDQTFDLFDRLGATDEQLDFPIVYASALNGYASLDTDATDGDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + P Q+Q+ SL+Y+SY+G IGIGRI G++K+ + ++N +
Sbjct: 189 TIVEKVSPPDVDLDGPFQMQVSSLDYNSYVGVIGIGRIQRGKVKTNMPLTLIN-REGAIR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +I QI F GL+RV V EA +GDI+ TGI+++ I T+C P LP L++DEPT+
Sbjct: 248 KGRILQIFGFHGLERVEVPEAQAGDIIAFTGIDKLEISETLCHPDTVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AGREGKF+T+RQI +RL E+++N+ LRV ++ D ++VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGREGKFLTSRQIHDRLQKELQHNVALRV-EDTDDPDKFKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL VSRP VI K ++GE EP+E + +++EE +QG IM+KL R GDL
Sbjct: 367 SVLIENMRREGFELGVSRPEVIIKEIDGEKCEPFEFVTIEVEEAHQGAIMEKLGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RLEY IPSRGLIGFQ EF+T T G+GL+ HVF+ Y P K +LG R
Sbjct: 427 LNMVPDGKGRIRLEYMIPSRGLIGFQTEFMTSTSGSGLLYHVFDHYGPI---KKGELGAR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+ GVL+S GKA+AY+L+ LQ+RG LF+ H D VYEGM++GIHSR NDL+VNP K KQL
Sbjct: 484 KRGVLVSMAQGKALAYALFALQERGELFLVHADEVYEGMLVGIHSRSNDLVVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++G+DE + L K++LE A+EFI++DELVE+TP +IRLRK+ L+E+ERKK
Sbjct: 544 TNIRAAGTDENLILTPIQKMSLEQALEFIDEDELVEVTPVSIRLRKKLLQEHERKK 599
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F +++ I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFKSHEKVSERIMDSNDIEKERGITILAKNTALDWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFALGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|424776850|ref|ZP_18203825.1| translation initiation factor IF-2 [Alcaligenes sp. HPC1271]
gi|422887890|gb|EKU30284.1| translation initiation factor IF-2 [Alcaligenes sp. HPC1271]
Length = 1018
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/550 (63%), Positives = 457/550 (83%), Gaps = 2/550 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK+LMKLGQMVTINQVLDQETAMILVEE+GH A A+KL+DPE+FL++ +N
Sbjct: 454 MAVKAAEVIKHLMKLGQMVTINQVLDQETAMILVEELGHKAIAAKLDDPEAFLVDTDAQN 513
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE RAP+VT+MGHVDHGKTSLLDYIR+ + EAGGITQHIGAYNV T G+ TF
Sbjct: 514 -DAELKPRAPVVTVMGHVDHGKTSLLDYIRRAKIASGEAGGITQHIGAYNVKTERGTATF 572
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARG K TD+V+LVVA+DDGVMPQTREAI HA+ +GVPL+VAINKIDK
Sbjct: 573 LDTPGHEAFTAMRARGTKATDVVILVVASDDGVMPQTREAIHHARAAGVPLVVAINKIDK 632
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++E+V+PEEYGG PFI +SAKTG GI++LLEN+ LQAE+LELKAPV
Sbjct: 633 PEANPERVKQELVAEEVVPEEYGGDVPFIPVSAKTGQGIDELLENVLLQAEMLELKAPVD 692
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG +IE+RLDKG+GPVAT+L+QSGTL D V+ GAS+GR+R+MLNE GK++ AGP
Sbjct: 693 APAKGTVIEARLDKGRGPVATILVQSGTLNRGDSVLVGASFGRVRAMLNETGKSLNSAGP 752
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+EL V+ +E+KAREI LFRQGKFRDVKLS+Q+ K E+MF+++
Sbjct: 753 SIPVEIQGLTEVPAAGDELVVMADERKAREIALFRQGKFRDVKLSRQQAAKLESMFDNLG 812
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E ++ L +IIKTDV GS+E L +SL LSTD+V++ V+H AVG I+ESD+NLAIAS A+
Sbjct: 813 -EGMQTLSLIIKTDVQGSQEALVQSLVKLSTDEVRVVVVHAAVGGISESDVNLAIASNAV 871
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRA+ S +KLA+ N I++RY+NIIY+ + E+K+ ++ ++ E++E ++G+ EIR+
Sbjct: 872 VIGFNVRAEQSAKKLAEANGIDLRYYNIIYDAVDEVKAALSGMLAPEQREEVIGMVEIRE 931
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
V V+++ IAGC + EG++RRDS++R+LRN + W+G LDSL+RFKD+VKEV++GF+C
Sbjct: 932 VYNVSRIGNIAGCMVTEGVVRRDSQVRLLRNNVVHWSGYLDSLRRFKDDVKEVRSGFDCG 991
Query: 541 RLSRIENQIQ 550
R N IQ
Sbjct: 992 ITLRGNNDIQ 1001
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I N ++ ERG F
Sbjct: 526 VMGHVDHGKTSLLDYIRRAKIASGEAGGITQHIGAYN-VKTERGTATF------------ 572
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ + +G MPQTR A G +V +NK
Sbjct: 573 ---LDTPGHEAFTAMRARGTKATDVVILVVASDDGVMPQTREAIHHARAAGVPLVVAINK 629
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A PE V + +++ E D P I SA G
Sbjct: 630 IDKPEANPERVKQEL--VAEEVVPEEYGGDVPFIPVSAKTG 668
>gi|292490727|ref|YP_003526166.1| GTP-binding protein TypA [Nitrosococcus halophilus Nc4]
gi|291579322|gb|ADE13779.1| GTP-binding protein TypA [Nitrosococcus halophilus Nc4]
Length = 609
Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/596 (58%), Positives = 459/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + + + R++DSN++E+ERGITI +KN +IE+NG
Sbjct: 9 AIIAHVDHGKTTLVDQLLKQSGTFGEWETVAERVLDSNDLERERGITILAKNTAIEWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA LG +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFALGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +RP WV+D TFDLFD+L AT+EQLDFPV+Y SAL GY + G+M PLF+
Sbjct: 129 KIDRPGSRPNWVLDQTFDLFDRLGATDEQLDFPVVYASALQGYGGLTPEVDAGDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ VP + P Q+QI SL+YS Y+G IGIGRI G +K+ V I++ +
Sbjct: 189 TIVQQVPPPPVDLEGPFQMQISSLDYSPYVGVIGIGRIQRGVVKTNTPVEILDREGHR-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K ++ Q+ F+GL+RV + EA +GDI+ I+GIE + I T+CDP++ GLP L +DEPT+
Sbjct: 248 KGRVLQVMGFRGLERVEIPEARAGDIIAISGIENLRISDTLCDPAQVEGLPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGR+GK++T+RQ++ RL E+ +N+ LRV ++ D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGRDGKYVTSRQLRERLLRELIHNVALRVEESDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL VSRP VI K + GEL EPYE L VD+EE +QG +M+KL R G+L
Sbjct: 367 SILIENMRREGYELGVSRPEVIVKEIKGELCEPYEQLMVDVEEQHQGAVMEKLGERKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVRLEY IPSRGLIGFQ EF+T T GTGLI HVF+ Y K + R
Sbjct: 427 ADMVPDGKGRVRLEYSIPSRGLIGFQTEFLTATSGTGLIYHVFDHYGAI---KKGAVVHR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL++ GKA+ Y+L+ LQ+RGRLFI VYEGMI+GIHSR+NDL+VNP+K KQL
Sbjct: 484 KNGVLVANGVGKALGYALFNLQERGRLFIGPGTEVYEGMILGIHSRENDLVVNPMKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L P++++LE A+EFI++DELVE+TPK+IRLRK+ L E+ERK+
Sbjct: 544 TNIRAAGSDENILLTPPLQLSLEQALEFIDEDELVEVTPKHIRLRKKLLLEHERKR 599
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLKQSGTFGEWETVAERVLDSNDLERERGITILAKNTAIEWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFALGLRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|71908070|ref|YP_285657.1| translation initiation factor IF-2 [Dechloromonas aromatica RCB]
gi|90101356|sp|Q47D94.1|IF2_DECAR RecName: Full=Translation initiation factor IF-2
gi|71847691|gb|AAZ47187.1| bacterial translation initiation factor 2 (bIF-2) [Dechloromonas
aromatica RCB]
Length = 904
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/551 (63%), Positives = 447/551 (81%), Gaps = 3/551 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEY-NK 59
M++K++ +IK +MK+G MVTINQVLDQETAMI+VEEMGH A A+KL+DP++FL +K
Sbjct: 339 MAIKATEIIKVMMKMGSMVTINQVLDQETAMIVVEEMGHQALAAKLDDPDAFLEEHAEHK 398
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
++ E RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T+ G +T
Sbjct: 399 DVPLEH--RAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETDRGMVT 456
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI HAK +GVPL+VA+NKID
Sbjct: 457 FLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHAKAAGVPLVVAVNKID 516
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K D N +R+KQ+L++E VIPEEYGG SPF+ +SAK G GI++LLE + LQAEILEL A
Sbjct: 517 KPDANPERVKQELVAEGVIPEEYGGDSPFVPVSAKKGTGIDELLEQVLLQAEILELTAQK 576
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
PAKG+IIE+RLDKG+G VAT+L+QSGTL+ DIV+AG +GR+R+ML+ENGK I EAG
Sbjct: 577 DAPAKGLIIEARLDKGRGAVATMLVQSGTLKRGDIVLAGQVFGRVRAMLDENGKPINEAG 636
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PSIPVEI GL+ VP +GEE V+ +EKKAREI LFRQGKFRDVKL+KQ+ K ENMF +
Sbjct: 637 PSIPVEILGLSDVPAAGEEAIVLGDEKKAREIALFRQGKFRDVKLAKQQAAKLENMFQQM 696
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
+ +VK L +I+K DV GS+E L ++L LS ++V++Q+IH AVG I+ESD+NLA AS A
Sbjct: 697 EEGEVKTLPLIVKADVQGSQEALVQTLSKLSNEEVRVQIIHGAVGAISESDVNLAQASGA 756
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+IIGFN+RADA +RKLA+ ++IRY+N+IY+ + E+K+ ++ ++ EK+E + G+ EIR
Sbjct: 757 VIIGFNIRADAGSRKLAESFGVDIRYYNVIYDAVDEVKAALSGMLSPEKREQITGMVEIR 816
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
QV LV+KV IAGCY+LEG ++R+S++R+LRN + W GELDSLKRFKD+VKEV++ FEC
Sbjct: 817 QVFLVSKVGAIAGCYVLEGFVKRNSRVRLLRNNVVQWDGELDSLKRFKDDVKEVRSNFEC 876
Query: 540 ERLSRIENQIQ 550
R N IQ
Sbjct: 877 GLSLRGNNDIQ 887
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 411 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETDRGMVTF------------ 457
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V VNK
Sbjct: 458 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHAKAAGVPLVVAVNK 514
Query: 1047 IDRSNARPEWV 1057
ID+ +A PE V
Sbjct: 515 IDKPDANPERV 525
>gi|254877242|ref|ZP_05249952.1| GTP-binding translational elongation factor Tu and G [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254843263|gb|EET21677.1| GTP-binding translational elongation factor Tu and G [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 605
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 460/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKNRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD+L AT+EQLDFP+IY SA++G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPDWVVDQVFDLFDRLGATDEQLDFPIIYASAINGWATNDLDQKKEDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+++ V + + P Q+QI SL+YSS+ G IGIGRI GRIK+ V I+N +K N
Sbjct: 189 AVIENVEHPAVDEDGPFQMQISSLDYSSFTGTIGIGRIQRGRIKTNTPVTIVNAKGEKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 249 -GRVLQILGYLGLERNEVPEASAGDIVCVTGMEGLKISDTLCNPDHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK+RL+ E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKDRLEKELIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREGYE++VSRP VIFK ++GE +EPYE +DIEE +QG +M+++ R G+L
Sbjct: 367 SILLENMRREGYEIAVSRPHVIFKDVDGEKHEPYEQAIIDIEEEHQGTVMERMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQTLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S GKA+AY+LW LQ+RG++FI H VYEGMIIGIHSRDNDL VNP K KQL
Sbjct: 484 QNGTLVSMVPGKALAYALWNLQERGKMFIGHGTEVYEGMIIGIHSRDNDLAVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG D+A+ L++PIK+TLEYA+EFI DDELVEITP +IRLRK+ L E++RKK
Sbjct: 544 TNVRASGKDDALTLVTPIKLTLEYALEFIEDDELVEITPVSIRLRKKHLTESDRKK 599
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 28/174 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKNRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAQGLKPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQVIP--EEYGGAS-----PFISISAKTGVGINKL 222
NKID+ D + D + +QV + G P I SA G N L
Sbjct: 128 NKIDR-----DGARPDWVVDQVFDLFDRLGATDEQLDFPIIYASAINGWATNDL 176
>gi|153873145|ref|ZP_02001822.1| GTP-binding protein TypA/BipA [Beggiatoa sp. PS]
gi|152070389|gb|EDN68178.1| GTP-binding protein TypA/BipA [Beggiatoa sp. PS]
Length = 604
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/597 (60%), Positives = 466/597 (78%), Gaps = 7/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTF-RKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT NQNI R+MDSN++EKERGITI SKN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLDAHNQNIE-RVMDSNDLEKERGITILSKNTAIRWQD 67
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KAL G +PIVV+
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKALARGLRPIVVI 127
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NKIDR ARP WV+D TF+LFD L A + QLDFP+IY SAL+GYAN +S+ R G+M PLF
Sbjct: 128 NKIDREGARPHWVLDQTFELFDHLGADDAQLDFPIIYASALNGYANHDSEVRDGDMQPLF 187
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
E+I+K+VP+ + + P QLQ+ +L+YSSY+G IGIGRI SGRIK+ ++I+N + K
Sbjct: 188 ESIVKHVPIPDVDPDEPFQLQVSALDYSSYVGVIGIGRINSGRIKTNSPIIIVNA-EGKQ 246
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ ++ Q+ F+GL RV + EA +GDI+ TGIE++ I T+CD LP L +DEPT
Sbjct: 247 RQGRVLQVLGFRGLTRVELPEATAGDIIAFTGIEKLKISDTLCDSEHVVALPPLTVDEPT 306
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VN SPLAG+EGK++T+RQI+ RL E+ +N+ LRV+ + D + VSGRGELH
Sbjct: 307 VSMTFQVNTSPLAGKEGKYVTSRQIRERLQRELLHNVALRVS-DMDDPDKFLVSGRGELH 365
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L ILIENMRRE YEL+VSRP+VI K ++G EPYE+L +D+++ QG +M+ L R D
Sbjct: 366 LGILIENMRRESYELAVSRPKVILKEIDGVSCEPYESLTIDVDQAYQGTVMELLGERKAD 425
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L++++ + K RVRL++ IP+RGLIGF+ EF+T T GTG+I HVFE YAP ++G+
Sbjct: 426 LRDMQPDGKGRVRLDFIIPARGLIGFRTEFLTSTCGTGVIYHVFEHYAP---AKLGNIGQ 482
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS SGK++AY+L+ LQ+RGRL I H + VYEGMIIGIHSR NDL+VNP+K KQ
Sbjct: 483 RVNGVLISNGSGKSLAYALFNLQERGRLVIGHGENVYEGMIIGIHSRSNDLVVNPLKAKQ 542
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTNIR++G+DE + L PI++TLE AIEFI+DDELVE+TPK IRLRK+FLKE ERK+
Sbjct: 543 LTNIRAAGTDENLLLTPPIQMTLEQAIEFIDDDELVEVTPKAIRLRKQFLKEYERKR 599
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLDAHNQNIERVMDSNDLEKERGITILSKNTAIRWQD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKALARGLRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|167626269|ref|YP_001676769.1| GTP binding translational elongation factor Tu and G family protein
[Francisella philomiragia subsp. philomiragia ATCC 25017]
gi|167596270|gb|ABZ86268.1| GTP binding translational elongation factor Tu and G family protein
[Francisella philomiragia subsp. philomiragia ATCC 25017]
Length = 605
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 460/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKNRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD+L AT+EQLDFP+IY SA++G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPDWVVDQVFDLFDRLGATDEQLDFPIIYASAINGWATNDLDQKKEDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+++ V + + P Q+QI SL+YSS+ G IGIGRI GRIK+ V I+N +K N
Sbjct: 189 AVIENVEHPAVDEDGPFQMQISSLDYSSFTGTIGIGRIQRGRIKTNTPVTIVNAKGEKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 249 -GRVLQILGYLGLERNEVPEASAGDIVCVTGMEGLKISDTLCNPDHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK+RL+ E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKDRLEKELIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREGYE++VSRP VIFK ++GE +EPYE +DIEE +QG +M+++ R G+L
Sbjct: 367 SILLENMRREGYEIAVSRPHVIFKDVDGEKHEPYEQAIIDIEEEHQGTVMERMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQTLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S GKA+AY+LW LQ+RG++FI H VYEGMIIGIHSRDNDL VNP K KQL
Sbjct: 484 QNGTLVSMVPGKALAYALWNLQERGKMFIGHGTEVYEGMIIGIHSRDNDLAVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG D+A+ L++PIK+TLEYA+EFI DDELVEITP +IRLRK+ L E++RKK
Sbjct: 544 TNVRASGKDDALTLVTPIKLTLEYALEFIEDDELVEITPVSIRLRKKHLTESDRKK 599
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 28/174 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKNRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAQGLKPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQVIP--EEYGGAS-----PFISISAKTGVGINKL 222
NKID+ D + D + +QV + G P I SA G N L
Sbjct: 128 NKIDR-----DGARPDWVVDQVFDLFDRLGATDEQLDFPIIYASAINGWATNDL 176
>gi|387824778|ref|YP_005824249.1| GTP-binding protein TypA/BipA [Francisella cf. novicida 3523]
gi|332184244|gb|AEE26498.1| GTP-binding protein TypA/BipA [Francisella cf. novicida 3523]
Length = 605
Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/596 (59%), Positives = 462/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD+L AT+EQLDFPVIY SA++G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPDWVVDQVFDLFDRLGATDEQLDFPVIYASAINGWATNDINEKKEDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + N P Q+QI SL+YS++ G IGIGRI G+IK+ V I+N +K
Sbjct: 189 AIIENVEHPAVDENGPFQMQISSLDYSNFTGTIGIGRIQRGKIKTNTPVTIVNAAGEK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 248 SGRVLQILGYLGLERNEVAEASAGDIVCVTGMEGLKISDTLCNPEHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK RL+ EI +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKERLEKEIIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+E++VSRP+VIFK ++GE +EPYE +DI+E +QG +M+K+ R G+L
Sbjct: 367 SILLENMRREGFEIAVSRPQVIFKDIDGERHEPYEQAIIDIDEEHQGTVMEKMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQTLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S SGKA+A++L+ LQ+RGR+FI H VYEGMIIGIH+RDNDL+VNP K KQL
Sbjct: 484 QNGTLVSMVSGKALAFALFNLQERGRMFIGHGTDVYEGMIIGIHNRDNDLVVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DEA+ L+ PIK+TLEYA+EFI DDELVEITPK+IRLRK++L E++RKK
Sbjct: 544 TNIRASGKDEAVVLVPPIKLTLEYALEFIEDDELVEITPKSIRLRKKYLTESDRKK 599
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 75/176 (42%), Gaps = 28/176 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQVIP--EEYGGAS-----PFISISAKTGVGINKLLE 224
NKID+ D + D + +QV + G P I SA G N + E
Sbjct: 128 NKIDR-----DGARPDWVVDQVFDLFDRLGATDEQLDFPVIYASAINGWATNDINE 178
>gi|300114960|ref|YP_003761535.1| GTP-binding protein TypA [Nitrosococcus watsonii C-113]
gi|299540897|gb|ADJ29214.1| GTP-binding protein TypA [Nitrosococcus watsonii C-113]
Length = 609
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 459/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + + + R++DSN++E+ERGITI +KN +IE+NG
Sbjct: 9 AIIAHVDHGKTTLVDQLLKQSGTFDEWETVAERVLDSNDLERERGITILAKNTAIEWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KA LG PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTQKAFALGLHPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +RP WV+D TFDLFD+L ATEEQLDFPV+Y SAL GY + + R G+M PLF+
Sbjct: 129 KIDRPGSRPNWVLDQTFDLFDRLGATEEQLDFPVVYASALQGYGGLSPETRTGDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + Q+QI SL+YS Y+G IGIGRI G + + V I++ + +
Sbjct: 189 TIVQCVSPPRVDLEGSFQMQISSLDYSPYVGVIGIGRIQRGGVSTNTPVEILD-REGQRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K ++ Q+ F+GL+RV V EA +GDI+ ++GI+ + I T+CDP++ GLP L +DEPT+
Sbjct: 248 KGRVLQVMGFRGLERVEVPEAQAGDIIAVSGIDNLRISDTLCDPAQVEGLPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGR+GK+IT+RQ++ RL E+ +N+ LRV +++ D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGRDGKYITSRQLRERLLRELIHNVALRVEESEDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL VSRP VI K + GEL EPYE L VD+EE +QG +M+KL R GDL
Sbjct: 367 SILIENMRREGYELGVSRPEVIAKEIEGELCEPYEQLVVDVEEQHQGAVMEKLGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVRLEY I SRGLIGFQ EF+T T GTGL+ HVF+ Y P K + R
Sbjct: 427 ADMVPDGKGRVRLEYSILSRGLIGFQTEFLTATSGTGLMYHVFDRYGPI---KKGTIAHR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ GKA+ Y+L+ LQ+RGRL I VYEGMIIGIHSR+NDL+VNP+K KQL
Sbjct: 484 KNGVLIANGVGKALGYALFNLQERGRLLIGPGAEVYEGMIIGIHSRENDLVVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L P++++LE A+EFI+DDELVE+TP++IRLRK+ L E+ERK+
Sbjct: 544 TNIRAAGSDENILLTPPLRLSLEQALEFIDDDELVEVTPEHIRLRKKLLLEHERKR 599
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLKQSGTFDEWETVAERVLDSNDLERERGITILAKNTAIEWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTQKAFALGLHPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|372489345|ref|YP_005028910.1| translation initiation factor IF-2 [Dechlorosoma suillum PS]
gi|359355898|gb|AEV27069.1| translation initiation factor IF-2 [Dechlorosoma suillum PS]
Length = 930
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/560 (61%), Positives = 450/560 (80%), Gaps = 5/560 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK LMK+G MVTINQVLDQETAMI+VEEMGH A A+KL+DP++FL ++ ++
Sbjct: 365 MAVKATEVIKTLMKMGSMVTINQVLDQETAMIVVEEMGHKALAAKLDDPDAFL-DDAVEH 423
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ + RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G +TF
Sbjct: 424 VDVKQEPRAPVVTVMGHVDHGKTSLLDYIRRTRVASGEAGGITQHIGAYHVETPRGMVTF 483
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TD+V+LVVAADDGVMPQT+EAI HAK + VPL+VA+NKIDK
Sbjct: 484 LDTPGHEAFTAMRARGAKATDLVILVVAADDGVMPQTKEAIHHAKAANVPLVVAVNKIDK 543
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+LI+E V+PEEYGG SPF+ +SAK G GI+ LLE++ LQAE+LEL AP
Sbjct: 544 PEANPDRVKQELIAEGVVPEEYGGDSPFVPVSAKKGTGIDDLLEHVLLQAEVLELTAPKD 603
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+IIE+RLDKGKGPVAT+L+QSGTL+ DIV+ G +G++R+ML+ENGK I +AGP
Sbjct: 604 APAKGIIIEARLDKGKGPVATILVQSGTLKRGDIVLVGQVFGKVRAMLDENGKPIDQAGP 663
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +GEE V+ +E+KAREI LFRQGKFR+VKL+KQ+ K E+MF+++
Sbjct: 664 SIPVEIQGLSDVPAAGEEAMVLADERKAREIALFRQGKFREVKLAKQQAAKLESMFDNMG 723
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ K L +I+K+DV GS+E L +SL LSTD+V++ VIH AVG I E+D+NLA ASKA+
Sbjct: 724 EGAAKFLPLIVKSDVQGSQEALVQSLNKLSTDEVRVNVIHAAVGAITETDVNLASASKAV 783
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RK A ++IRY+NIIY+ + E+K+ ++ ++ EK+E + GL EIRQ
Sbjct: 784 IIGFNTRADAGARKAADTFGVDIRYYNIIYDAVDEVKAALSGMLSPEKREQITGLVEIRQ 843
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC- 539
V ++KV IAGC +LEG+++R+S++R+LRN + W GELDSLKR+KD+VKEVK GFEC
Sbjct: 844 VFRISKVGSIAGCLVLEGVVKRNSRVRLLRNNVVQWDGELDSLKRYKDDVKEVKGGFECG 903
Query: 540 ---ERLSRIENQIQRDISEI 556
+ + IE Q ++ EI
Sbjct: 904 LSLKNFNEIEEGDQLEVYEI 923
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 27/190 (14%)
Query: 879 RISSLIPIDILLSSFGIIYLSDLLSKRFLHGQ----NLFLSDENIYILIKS-------AI 927
++ S++ I+ +L + + + + + L + + FL D ++ +K +
Sbjct: 378 KMGSMVTINQVLDQETAMIVVEEMGHKALAAKLDDPDAFLDDAVEHVDVKQEPRAPVVTV 437
Query: 928 IAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRI 987
+ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 438 MGHVDHGKTSLLDYIRRTRVASGEAGGITQHI-GAYHVETPRGMVTF------------- 483
Query: 988 NIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKI 1047
+DTPGH F R D V+L++ A +G MPQT+ A +V VNKI
Sbjct: 484 --LDTPGHEAFTAMRARGAKATDLVILVVAADDGVMPQTKEAIHHAKAANVPLVVAVNKI 541
Query: 1048 DRSNARPEWV 1057
D+ A P+ V
Sbjct: 542 DKPEANPDRV 551
>gi|134302162|ref|YP_001122131.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis WY96-3418]
gi|421751990|ref|ZP_16189026.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis AS_713]
gi|421753849|ref|ZP_16190837.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis 831]
gi|421757571|ref|ZP_16194449.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis 80700103]
gi|421759425|ref|ZP_16196257.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis 70102010]
gi|424674742|ref|ZP_18111658.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis 70001275]
gi|134049939|gb|ABO47010.1| GTP-binding protein TypA [Francisella tularensis subsp. tularensis
WY96-3418]
gi|409086154|gb|EKM86276.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis 831]
gi|409086325|gb|EKM86445.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis AS_713]
gi|409090806|gb|EKM90814.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis 70102010]
gi|409092419|gb|EKM92394.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis 80700103]
gi|417434786|gb|EKT89728.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis 70001275]
Length = 605
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/596 (59%), Positives = 462/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WVVD FDLFD+L AT+EQLDFPVIY SA+ G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPGWVVDQVFDLFDRLGATDEQLDFPVIYASAIDGWATNDINQKKDDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + N P Q+QI SL+YS++ G IGIGRI G+IK+ V I+N +K
Sbjct: 189 AIVENVEHPNVDENGPFQMQISSLDYSNFTGTIGIGRIQRGKIKTNTPVTIVNVAGEK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 248 SGRVLQILGYLGLERNEVAEASAGDIVCVTGMEGLKISDTLCNPEHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK RL+ E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKERLEKELIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+E++VSRP+VIFK ++GE +EPYE +DI+E +QG +M+K+ R G+L
Sbjct: 367 SILLENMRREGFEIAVSRPQVIFKDIDGEKHEPYEQAIIDIDEEHQGTVMEKMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K +L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQNLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S SGKA+A++L+KLQ+RGR+FI H VYEGMIIGIH+RDNDL+VNP K KQL
Sbjct: 484 QNGTLVSMVSGKALAFALFKLQERGRMFIGHGTDVYEGMIIGIHNRDNDLVVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DEA+ L+ PIK+TLEYA+EFI DDELVEITPK+IRLRK++L E++RKK
Sbjct: 544 TNIRASGKDEAVVLVPPIKLTLEYALEFIEDDELVEITPKSIRLRKKYLTESDRKK 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|83945558|ref|ZP_00957905.1| GTP-binding protein TypA [Oceanicaulis sp. HTCC2633]
gi|83851134|gb|EAP88992.1| GTP-binding protein TypA [Oceanicaulis alexandrii HTCC2633]
Length = 641
Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 464/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LLRQSGTF + R+MDSN++EKERGITI +KN ++ +N
Sbjct: 44 AIVAHVDHGKTTLVDKLLRQSGTFDERAAAVERVMDSNDLEKERGITILAKNTAVTWNDY 103
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQT FVT+KAL LG KPIVV+N
Sbjct: 104 AINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTTFVTKKALALGLKPIVVIN 163
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD TFDLFD+L AT+EQ+DFPV+Y SAL G+A + R G++ PLF+
Sbjct: 164 KVDRPGARPDWVVDQTFDLFDRLGATDEQMDFPVVYASALEGWATLDVDQRGGDLNPLFQ 223
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQLQ+ +L+YSSY G IG+GRI G++ Q VV++ G D
Sbjct: 224 AIVDRVDHPQVDQDAPLQLQVSALDYSSYTGVIGLGRIRRGKLSKNQQVVVV-GADGVER 282
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+AK+ Q+ F GLD+V + A +GDI+ GI+ + I T+CDP LP L +DEPT+
Sbjct: 283 RAKVLQVFGFHGLDKVERDSASAGDIITFNGIDPLNISDTLCDPDHVEALPPLTVDEPTI 342
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AGREGKF+T+RQIK RLD E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 343 SMIFQVNDSPFAGREGKFVTSRQIKERLDRELIHNVALRVEQQDNADK-FLVSGRGELHL 401
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL+V RP+VI+K ++G + EP+E L +D+EE +QG +M++L R +L
Sbjct: 402 SVLIETMRREGFELAVGRPQVIYKEVDGVMCEPFETLTIDVEEEHQGGVMERLGSRKAEL 461
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + RVRLEY P+RGLIGF++EF+TLT+G+GL+ H F+ YAP +S ++G+R
Sbjct: 462 KNMEPDGNGRVRLEYMAPTRGLIGFRSEFLTLTQGSGLMFHTFDHYAP---RSAGEVGQR 518
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
G +IS +GKA+A++LW +Q+RG+LFI H VYEGM++G+++R+ D++VNP+K K+L
Sbjct: 519 PKGAIISMETGKALAFALWNIQERGKLFIGHGVEVYEGMVVGLNAREEDMIVNPLKGKKL 578
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L P+++TLEYA+EFINDDELVE+TP++IR+RKRFL E+ERKK
Sbjct: 579 TNMRASGTDEAVVLTPPVRVTLEYALEFINDDELVEVTPESIRIRKRFLLEHERKK 634
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + + + F E + + N V N
Sbjct: 43 IAIVAHVDHGKTTLVDKLLRQSGTFDERAAAVERVMDSNDLEKERGITILAKNTAVTWND 102
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+I +DTPGH F R + D V+L+V A DG MPQT A G+ IV I
Sbjct: 103 YAINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTTFVTKKALALGLKPIVVI 162
Query: 176 NKIDK 180
NK+D+
Sbjct: 163 NKVDR 167
>gi|387887225|ref|YP_006317524.1| GTP binding translational elongation factor Tu and G family protein
[Francisella noatunensis subsp. orientalis str. Toba 04]
gi|386872041|gb|AFJ44048.1| GTP binding translational elongation factor Tu and G family protein
[Francisella noatunensis subsp. orientalis str. Toba 04]
Length = 605
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/596 (58%), Positives = 459/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKNRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD+L AT+EQLDFP+IY SA++G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPDWVVDQVFDLFDRLGATDEQLDFPIIYASAINGWATNDLDQKKEDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A+++ V + + P Q+QI SL+YSS+ G IGIGRI GRIK+ + I+N +K N
Sbjct: 189 AVIENVEHPAVDEDGPFQMQISSLDYSSFTGTIGIGRIQRGRIKTNTPITIVNAKGEKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 249 -GRVLQILGYLGLERNEVPEASAGDIVCVTGMEGLKISDTLCNPDHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK+RL+ E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKDRLEKELIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREGYE++VSRP VIFK ++ E +EPYE +DIEE +QG IM+++ R G+L
Sbjct: 367 SILLENMRREGYEIAVSRPHVIFKDVDSEKHEPYEQAIIDIEEEHQGTIMERMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQTLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S GKA+AY+LW LQ+RG++FI H VYEGMIIGIHSRDNDL VNP K KQL
Sbjct: 484 QNGTLVSMVPGKALAYALWNLQERGKMFIGHGTEVYEGMIIGIHSRDNDLAVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG D+A+ L++PIK+TLEYA+EFI DDELVEITP +IRLRK+ L E++RKK
Sbjct: 544 TNVRASGKDDALTLVTPIKLTLEYALEFIEDDELVEITPVSIRLRKKHLTESDRKK 599
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 74/174 (42%), Gaps = 28/174 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKNRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAQGLKPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQVIP--EEYGGAS-----PFISISAKTGVGINKL 222
NKID+ D + D + +QV + G P I SA G N L
Sbjct: 128 NKIDR-----DGARPDWVVDQVFDLFDRLGATDEQLDFPIIYASAINGWATNDL 176
>gi|387127229|ref|YP_006295834.1| GTP-binding protein TypA/BipA [Methylophaga sp. JAM1]
gi|386274291|gb|AFI84189.1| GTP-binding protein TypA/BipA [Methylophaga sp. JAM1]
Length = 610
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/596 (57%), Positives = 459/596 (77%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +++ + R+MDSN++E+ERGITI SKN +I +N
Sbjct: 15 AIIAHVDHGKTTLVDQLLRQSGTFSEHEELQERVMDSNDLERERGITILSKNTAIRWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+D+ EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDSSEGPMPQTRFVTQKALALGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TFDLF L AT+EQLDF VIY S L+G+A R G+M PLF+
Sbjct: 135 KIDKPSARPGWVLDQTFDLFANLDATDEQLDFDVIYASGLNGFAGMEDTVRDGDMTPLFQ 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
++ V + + P ++Q+ SL+Y+SY+G IGIGRI G++K+ V +++ P K
Sbjct: 195 LVVDKVNPPAVDPDGPFRMQVTSLDYNSYVGVIGIGRIERGKVKTNMPVTVID-PQGKKR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GL R V EA +GDI+ TG++ + I T+CDPS LP L++DEPT+
Sbjct: 254 NGRVMQVMGFMGLRREEVEEAHAGDIIAFTGLDPLNISDTLCDPSAVEALPPLSVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP AG+EGKF+TTRQI+ RLD E+ +N+ L+V Q D + VSGRGELHL
Sbjct: 314 TMTFQVNNSPFAGKEGKFVTTRQIRERLDRELIHNVALKVEQLVEDPDKFRVSGRGELHL 373
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E+ VSRP VI + +NG EPYE + +D+E+ +QG +M+K+ RGG+L
Sbjct: 374 SVLIENMRREGFEMGVSRPEVIIREVNGNKEEPYEAVTIDVEDTHQGTVMEKMGTRGGEL 433
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL++ IPSRGLIGF+ EF+T T+GTGLI VF+ YAP + GKR
Sbjct: 434 KDMAPDGKGRVRLDFIIPSRGLIGFRTEFLTATQGTGLIYSVFDHYAPVKPGT---FGKR 490
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ GKAVA++++ LQ+RGR+F+ H D VYEGM+IGIHSRDNDL+VN +K KQL
Sbjct: 491 QNGVLIANGVGKAVAFAIFNLQERGRMFVGHGDEVYEGMVIGIHSRDNDLVVNALKGKQL 550
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L+ PI+++LE A+EFI +DEL+E+TPK+IR+RK+ L E+ERK+
Sbjct: 551 TNVRASGTDEAIALVPPIRMSLEQALEFIGEDELLEVTPKSIRVRKKLLLEHERKR 606
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + FSE + + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDQLLRQSGTFSEHEELQERVMDSNDLERERGITILSKNTAIRWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V + +G MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDSSEGPMPQTRFVTQKALALGLKPIVVI 133
Query: 176 NKIDK 180
NKIDK
Sbjct: 134 NKIDK 138
>gi|220936305|ref|YP_002515204.1| GTP-binding protein TypA [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219997615|gb|ACL74217.1| GTP-binding protein TypA [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 605
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/596 (58%), Positives = 455/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + +I R+MDSN +E+ERGITI +KN ++ +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERAHITERMMDSNALEQERGITILAKNTALTWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA +GFKPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAMGFKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD+L ATEEQLDFPV+Y SAL G+A +G+M PLF+
Sbjct: 129 KIDRPGARPDWVVDQIFDLFDRLGATEEQLDFPVVYCSALKGFAGLTKDVTEGDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V ++ P Q+Q+ SL+Y+S+ G IGIGRI G++K+ V ++ +
Sbjct: 189 TIIDKVSPPAVDAEGPFQMQVSSLDYNSFQGLIGIGRITRGKVKTNSAVKAID-REGNVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I QI FKGL+RV V EA +GDI+ TG++E+ I T+CDP+ L L +DEPT+
Sbjct: 248 SGRILQILGFKGLERVEVPEARAGDIIAFTGMDELYISDTLCDPAAVEALKALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AG+EGKF+T+R I++RL E+K+N+ LRV + + D + VSGRGELHL
Sbjct: 308 SMTFQVNTSPFAGKEGKFVTSRNIRDRLFEELKHNVALRVEETEDPDK-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL VSRP VI + +G EPYE + VD+EE +QG IM+KL R G+L
Sbjct: 367 SILIENMRREGFELGVSRPEVIVRERDGVREEPYEMVTVDVEEQHQGAIMEKLGGRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVRL+Y++PSRGLIGFQ EF+T T GTG++ HVF+ Y P+ S +G R
Sbjct: 427 LDMIPDGKGRVRLDYKVPSRGLIGFQTEFLTATSGTGILHHVFDSYGPYRPGS---VGAR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ Y+L+ LQ+RGRLFI H D VYEGM+IG+HSRDNDL+VNP+K KQL
Sbjct: 484 NNGVLIANGAGKALGYALFNLQERGRLFIGHGDEVYEGMVIGLHSRDNDLVVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L PI++TLE A+EFI DDELVE+TPK+IR+RK+ L E+ERK+
Sbjct: 544 TNIRAAGSDENIILTPPIRMTLEQALEFIEDDELVEVTPKSIRVRKKLLLEHERKR 599
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E IT+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERAHITERMMDSNALEQERGITILAKNTALTWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAMGFKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|118497747|ref|YP_898797.1| GTP binding translational elongation factor Tu and G family protein
[Francisella novicida U112]
gi|194323719|ref|ZP_03057495.1| GTP-binding protein TypA [Francisella novicida FTE]
gi|208779812|ref|ZP_03247156.1| GTP-binding protein TypA [Francisella novicida FTG]
gi|254373106|ref|ZP_04988595.1| hypothetical protein FTCG_00685 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374558|ref|ZP_04990039.1| GTP binding translational elongation factor Tu and G family protein
[Francisella novicida GA99-3548]
gi|118423653|gb|ABK90043.1| GTP binding translational elongation factor Tu and G family protein
[Francisella novicida U112]
gi|151570833|gb|EDN36487.1| hypothetical protein FTCG_00685 [Francisella novicida GA99-3549]
gi|151572277|gb|EDN37931.1| GTP binding translational elongation factor Tu and G family protein
[Francisella novicida GA99-3548]
gi|194322083|gb|EDX19565.1| GTP-binding protein TypA [Francisella tularensis subsp. novicida FTE]
gi|208744267|gb|EDZ90567.1| GTP-binding protein TypA [Francisella novicida FTG]
Length = 605
Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/596 (59%), Positives = 463/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD+L AT+EQLDFPVIY SA++G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPDWVVDQVFDLFDRLGATDEQLDFPVIYASAINGWATNDINQKKDDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + N P Q+QI SL+YS++ G IGIGRI G+IK+ V I+N +K
Sbjct: 189 AIVENVEHPNVDENGPFQMQISSLDYSNFTGTIGIGRIQRGKIKTNTPVTIVNVAGEK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 248 SGRVLQILGYLGLERNEVAEASAGDIVCVTGMEGLKISDTLCNPEHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK RL+ E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKERLEKELIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+E++VSRP+VIFK ++GE +EPYE +DI+E +QG +M+K+ R G+L
Sbjct: 367 SILLENMRREGFEIAVSRPQVIFKDIDGEKHEPYEQAIIDIDEEHQGTVMEKMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K +L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQNLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S SGKA+A++L+ LQ+RGR+FI H VYEGMIIGIH+RDNDL+VNP K KQL
Sbjct: 484 QNGTLVSMVSGKALAFALFNLQERGRMFIGHGTDVYEGMIIGIHNRDNDLVVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DEA+ L+ PIK+TLEYA+EFI DDELVEITPK+IRLRK++L E++RKK
Sbjct: 544 TNIRASGKDEAVVLVPPIKLTLEYALEFIEDDELVEITPKSIRLRKKYLTESDRKK 599
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQVI 198
NKID+ D + D + +QV
Sbjct: 128 NKIDR-----DGARPDWVVDQVF 145
>gi|383758677|ref|YP_005437662.1| translation initiation factor IF-2 [Rubrivivax gelatinosus IL144]
gi|381379346|dbj|BAL96163.1| translation initiation factor IF-2 [Rubrivivax gelatinosus IL144]
Length = 980
Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/539 (61%), Positives = 440/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S +IK LMKLGQMVTINQ LDQETAMILVEEMGH A A+KL+DPE+F E +
Sbjct: 415 MSVKASELIKQLMKLGQMVTINQQLDQETAMILVEEMGHKAFAAKLDDPEAFTEEETAAH 474
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 475 NAAEALPRPPVVTVMGHVDHGKTSLLDYIRRARVAAGEAGGITQHIGAYHVETPRGVVTF 534
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK + VP++VA+NKIDK
Sbjct: 535 LDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAAQVPIVVALNKIDK 594
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+K +L++E V+PE++GG SPF+ +SAKTG GI+ LLE + LQAE+LELKAPV
Sbjct: 595 PDANPERVKSELVAEGVVPEDFGGDSPFVPVSAKTGTGIDDLLEQVLLQAEVLELKAPVE 654
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
A+G++IE+RLDKG+GPVATVL+QSGTL+ D+V+AG+SYGR+R+ML+E+GKN GP
Sbjct: 655 AAARGLVIEARLDKGRGPVATVLVQSGTLKKGDVVLAGSSYGRVRAMLDEDGKNTESVGP 714
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
S+PVEIQGLT+VP +G+E V+ +E++AREI FRQGK+RDVKL+KQ+ K ENMF+ +
Sbjct: 715 SMPVEIQGLTEVPQAGDEFIVLTDERRAREIATFRQGKYRDVKLAKQQAAKLENMFDQLG 774
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + L +IIK DV GS+E L +SL+ LST +VK+Q++H AVG I+ESD+NLAIASKA+
Sbjct: 775 -DAAQTLPLIIKADVQGSQEALAQSLQKLSTAEVKVQIVHAAVGGISESDVNLAIASKAV 833
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N +++RY+NIIY+ + E+K+ + ++ E++E ++G+AEIRQ
Sbjct: 834 IIGFNTRADAGARKLAEGNGVDLRYYNIIYDAVDEVKAAMAGMLAPEQREEVIGMAEIRQ 893
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AGC I G + R+++ R+LR+ +++TGE++SLKR KD+V+EVK GFEC
Sbjct: 894 VFVASKIGTVAGCMITAGQVTRNARFRLLRDNVVVYTGEIESLKRMKDDVREVKEGFEC 952
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 488 VMGHVDHGKTSLLDYIRRARVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 534
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGHA F R D V+L++ A +G MPQT+ A +V +NK
Sbjct: 535 ---LDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAAQVPIVVALNK 591
Query: 1047 IDRSNARPEWV 1057
ID+ +A PE V
Sbjct: 592 IDKPDANPERV 602
>gi|332528132|ref|ZP_08404163.1| translation initiation factor IF-2 [Rubrivivax benzoatilyticus JA2]
gi|332112703|gb|EGJ12496.1| translation initiation factor IF-2 [Rubrivivax benzoatilyticus JA2]
Length = 970
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/539 (61%), Positives = 440/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S +IK LMKLGQMVTINQ LDQETAMILVEEMGH A A+KL+DPE+F E +
Sbjct: 405 MSVKASELIKQLMKLGQMVTINQQLDQETAMILVEEMGHKAFAAKLDDPEAFTEEETAAH 464
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 465 NAAEALPRPPVVTVMGHVDHGKTSLLDYIRRARVAAGEAGGITQHIGAYHVETPRGVVTF 524
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI+HAK + VP++VA+NKIDK
Sbjct: 525 LDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHAKAAEVPIVVALNKIDK 584
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N++R+K +L++E V+PE++GG SPF+ +SAK G GI+ LLE + LQAE+LELKAPV
Sbjct: 585 PDANIERVKSELVAEGVVPEDFGGDSPFVPVSAKAGTGIDNLLEQVLLQAEVLELKAPVE 644
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
A+G++IE+RLDKG+GPVATVL+QSGTL+ D+V+AG+SYGR+R+ML+E+GKN GP
Sbjct: 645 AAARGLVIEARLDKGRGPVATVLVQSGTLKKGDVVLAGSSYGRVRAMLDEDGKNTESVGP 704
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
S+PVEIQGLT+VP +G+E V+ +E++AREI FRQGK+RDVKL++Q+ K ENMF+ +
Sbjct: 705 SMPVEIQGLTEVPQAGDEFIVLTDERRAREIATFRQGKYRDVKLARQQAAKLENMFDQLG 764
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + L +IIK DV GS+E L +SL+ LST +VK+Q++H AVG I+ESD+NLAIASKA+
Sbjct: 765 -DAAQTLPLIIKADVQGSQEALAQSLQKLSTAEVKVQIVHAAVGGISESDVNLAIASKAV 823
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN RADA RKLA+ N ++IRY+NIIY+ + E+K+ + ++ E++E ++G+AEIRQ
Sbjct: 824 VIGFNTRADAGARKLAEGNGVDIRYYNIIYDAVDEVKAAMAGMLAPEQREEVIGMAEIRQ 883
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AGC I G + R+++ R+LR+ +++TGE++SLKR KD+V+EVK GFEC
Sbjct: 884 VFVASKIGTVAGCMITAGQVTRNARFRLLRDNVVVYTGEIESLKRLKDDVREVKEGFEC 942
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 478 VMGHVDHGKTSLLDYIRRARVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 524
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
+DTPGHA F R D V+L++ A +G MPQT+ A K PIVV +N
Sbjct: 525 ---LDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTKEAISHA-KAAEVPIVVALN 580
Query: 1046 KIDRSNARPEWV 1057
KID+ +A E V
Sbjct: 581 KIDKPDANIERV 592
>gi|385793135|ref|YP_005826111.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678460|gb|AEE87589.1| GTP-binding protein TypA/BipA [Francisella cf. novicida Fx1]
Length = 605
Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 463/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD+L AT+EQLDFPVIY SA++G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPDWVIDQVFDLFDRLGATDEQLDFPVIYASAINGWATNDINQKKDDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + N P Q+QI SL+YS++ G IGIGRI G+IK+ V I+N +K
Sbjct: 189 AIVENVEHPNVDENGPFQMQISSLDYSNFTGTIGIGRIQRGKIKTNTPVTIVNVAGEK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 248 SGRVLQILGYLGLERNEVAEASAGDIVCVTGMEGLKISDTLCNPEHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK RL+ E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKERLEKELIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+E++VSRP+VIFK ++GE +EPYE +DI+E +QG +M+K+ R G+L
Sbjct: 367 SILLENMRREGFEIAVSRPQVIFKDIDGEKHEPYEQAIIDIDEEHQGTVMEKMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K +L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQNLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S SGKA+A++L+ LQ+RGR+FI H VYEGMIIGIH+RDNDL+VNP K KQL
Sbjct: 484 QNGTLVSMVSGKALAFALFNLQERGRMFIGHGTDVYEGMIIGIHNRDNDLVVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DEA+ L+ PIK+TLEYA+EFI DDELVEITPK+IRLRK++L E++RKK
Sbjct: 544 TNIRASGKDEAVVLVPPIKLTLEYALEFIEDDELVEITPKSIRLRKKYLTESDRKK 599
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQVI 198
NKID+ D + D + +QV
Sbjct: 128 NKIDR-----DGARPDWVIDQVF 145
>gi|288942389|ref|YP_003444629.1| GTP-binding protein TypA [Allochromatium vinosum DSM 180]
gi|288897761|gb|ADC63597.1| GTP-binding protein TypA [Allochromatium vinosum DSM 180]
Length = 603
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN +EKERGITI SKN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGDRFGPVERVMDSNALEKERGITILSKNTAIRWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT KA G +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTSKAFAHGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD+L A++EQLDFP++Y S L+GYA R+G+M PLFE
Sbjct: 129 KVDRPGARPDWVIDQVFDLFDRLGASDEQLDFPIVYASGLNGYAGLTDDVREGDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++ P + + ++P Q+Q+ +L+Y++Y+G I +GRI GR+K Q VV++ PD +
Sbjct: 189 AIVQHCPAPEVDPDSPFQMQVSTLDYNAYVGAIAVGRIRHGRVKPNQQVVVVK-PDGTRH 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAKI + + GLDR V +A +GDIV +TGIE + T+CDP LP L +DEPT+
Sbjct: 248 KAKIGLVYGYLGLDRHEVPQATAGDIVALTGIEAPGVSDTLCDPEHVQALPTLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG++GK++T+RQ+K+RL+ E+ +N+ LRV + +D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKDGKYLTSRQLKDRLERELIHNVALRVEEG-NDPEKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+EL+VSRP VIF+ ++G++ EPYE L VDI+E +QG IMQ L R G+L
Sbjct: 367 SILLENMRREGFELAVSRPEVIFREIDGQICEPYEQLTVDIDETSQGSIMQALGERRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL+Y IPSRGLIGFQ EF++LT GTGL HVFE Y P + + R
Sbjct: 427 KDMVPDGKGRVRLDYEIPSRGLIGFQTEFMSLTSGTGLKYHVFERYRPAHMGG---IAPR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNG +IS +GKA+ Y+L+ LQ+RGR+ ++ + VYEG ++GIHSRDNDL VNP+K KQL
Sbjct: 484 RNGAMISNATGKALGYALFNLQERGRMMVSPGEEVYEGQVVGIHSRDNDLTVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L P+K TLE A+EFI DDELVEITP IR+RKR LKE++RK+
Sbjct: 544 TNIRAAGSDENILLTPPVKFTLEQALEFIEDDELVEITPNAIRVRKRHLKESDRKR 599
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGDRFGPVERVMDSNALEKERGITILSKNTAIRWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR + A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTSKAFAHGLRPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ D +
Sbjct: 128 NKVDRPGARPDWV 140
>gi|124267110|ref|YP_001021114.1| translation initiation factor IF-2 [Methylibium petroleiphilum PM1]
gi|166232556|sp|A2SH40.1|IF2_METPP RecName: Full=Translation initiation factor IF-2
gi|124259885|gb|ABM94879.1| bacterial translation initiation factor 2 (bIF-2) [Methylibium
petroleiphilum PM1]
Length = 948
Score = 727 bits (1877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/540 (63%), Positives = 442/540 (81%), Gaps = 3/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK LMKLGQMVTINQ LDQETAMILVEEMGH A +KL+DP++FL E +
Sbjct: 383 MSVKASEVIKQLMKLGQMVTINQQLDQETAMILVEEMGHKAFTAKLDDPDAFL--EDDVE 440
Query: 61 ITAESL-VRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
+T L RAP+VT+MGHVDHGKTSLLDYIR T V EAGGITQHIGAY+V T G IT
Sbjct: 441 VTDVPLEPRAPVVTVMGHVDHGKTSLLDYIRTTRVAAGEAGGITQHIGAYHVETPRGMIT 500
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGAK TD+V+LVVAADDGVMPQT+EAI HAK + VPLIVAINKID
Sbjct: 501 FLDTPGHEAFTAMRARGAKATDLVILVVAADDGVMPQTKEAIHHAKAAEVPLIVAINKID 560
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K NL+R++ +LI+EQV+PE++GG SPF+ +SAKTG GI++LLE + LQAE+LEL+A V
Sbjct: 561 KPGTNLERVRSELIAEQVVPEDFGGDSPFVQVSAKTGQGIDELLEQVLLQAEVLELQAQV 620
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
PAKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG++YGR+R+ML+ENGK EAG
Sbjct: 621 AAPAKGLVIEAQLDKGRGPVATVLVQSGTLKRGDVVLAGSTYGRVRAMLDENGKPATEAG 680
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PSIPVEIQGLT+VP +G+E V+ +E++AREI FR GK+RDVKLSKQ+ K ENMF +
Sbjct: 681 PSIPVEIQGLTEVPQAGDEFMVLSDERRAREIATFRSGKYRDVKLSKQQAAKLENMFETM 740
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
+ +V+ L +IIK DV GS+E L SL LST +VK+Q++H AVG I+ESD+NLAIASKA
Sbjct: 741 GQGEVQTLPLIIKADVQGSQEALGASLLKLSTAEVKVQIVHAAVGGISESDVNLAIASKA 800
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+IIGFNVRADA RKLA+ NN+++RY+NIIY+ + EIKS +T ++ E+KE L+G AEIR
Sbjct: 801 VIIGFNVRADAGARKLAEGNNVDLRYYNIIYDAVDEIKSAMTGMLAPEQKEELIGTAEIR 860
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG + G++RR+++ R+LR ++++GE++S++R KD+V+EVK GFEC
Sbjct: 861 TVFVASKIGTVAGSMVTSGIVRRNARFRLLRENVVVYSGEIESVRRMKDDVREVKEGFEC 920
Score = 56.2 bits (134), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ + I I + +E RG+ F
Sbjct: 455 VMGHVDHGKTSLLDYIRTTRVAAGEAGGITQHI-GAYHVETPRGMITF------------ 501
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A IV +NK
Sbjct: 502 ---LDTPGHEAFTAMRARGAKATDLVILVVAADDGVMPQTKEAIHHAKAAEVPLIVAINK 558
Query: 1047 IDRSNARPEWV 1057
ID+ E V
Sbjct: 559 IDKPGTNLERV 569
>gi|89256151|ref|YP_513513.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica LVS]
gi|156502178|ref|YP_001428243.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica FTNF002-00]
gi|254367473|ref|ZP_04983499.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica 257]
gi|290953278|ref|ZP_06557899.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica URFT1]
gi|422938577|ref|YP_007011724.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica FSC200]
gi|423050492|ref|YP_007008926.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica F92]
gi|89143982|emb|CAJ79207.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica LVS]
gi|134253289|gb|EBA52383.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica 257]
gi|156252781|gb|ABU61287.1| GTP-binding protein [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|407293728|gb|AFT92634.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica FSC200]
gi|421951214|gb|AFX70463.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica F92]
Length = 605
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/596 (59%), Positives = 461/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WVVD FDLFD+L AT+EQLDFPVIY SA+ G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPGWVVDQVFDLFDRLGATDEQLDFPVIYASAIDGWATNDINQKKDDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + N P Q+QI SL+YS++ G IGIGRI G+IK+ V I+N +K
Sbjct: 189 AIVENVEHPNVDENGPFQMQISSLDYSNFTGTIGIGRIQRGKIKTNTPVTIVNVAGEK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 248 IGRVLQILGYLGLERNEVAEASAGDIVCVTGMERLKISDTLCNPEHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK RL+ E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKERLEKELIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+E++VSRP+VIFK ++GE +EPYE +DI+E +QG +M+K+ R G+L
Sbjct: 367 SILLENMRREGFEIAVSRPQVIFKDIDGEKHEPYEQAIIDIDEEHQGTVMEKMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K +L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQNLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S SGKA+A++L+ LQ+RGR+FI H VYEGMIIGIH+RDNDL+VNP K KQL
Sbjct: 484 QNGTLVSMVSGKALAFALFNLQERGRMFIGHGTDVYEGMIIGIHNRDNDLVVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DEA+ L+ PIK+TLEYA+EFI DDELVEITPK+IRLRK++L E++RKK
Sbjct: 544 TNIRASGKDEAVVLVPPIKLTLEYALEFIEDDELVEITPKSIRLRKKYLTESDRKK 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|381151758|ref|ZP_09863627.1| GTP-binding protein TypA/BipA [Methylomicrobium album BG8]
gi|380883730|gb|EIC29607.1| GTP-binding protein TypA/BipA [Methylomicrobium album BG8]
Length = 604
Score = 726 bits (1873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/596 (58%), Positives = 459/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + + R+MDSN++EKERGITI +KN ++++NG
Sbjct: 10 AIIAHVDHGKTTLVDKLLQQSGTFAAHAKVAERVMDSNDLEKERGITILAKNTALDWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA LG +PIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFALGLRPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD TFDLFD+L AT+EQLDFP++Y SAL+G+A G+M PLFE
Sbjct: 130 KIDRPGARPDWVVDQTFDLFDRLGATDEQLDFPIVYASALNGFAGLEPTVTGGDMTPLFE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ +V + + P Q+Q+ SL+Y++Y+G IGIGRI G +K+ + I++ + +
Sbjct: 190 TIVTHVSPPDVDPDGPFQMQVSSLDYNTYVGVIGIGRIQRGAVKTNMQLTIVS-REGEER 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K +I Q+ F GL+RV V EA +GDI+ TGIE++ I T+C P + L +DEPT+
Sbjct: 249 KGRILQVFGFHGLERVEVPEANAGDIIAFTGIEKLEISDTLCHPDAIEAMAPLTVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP AG+EGKF+T+RQI+ RL+ E+++N+ LRV ++ D ++VSGRGELHL
Sbjct: 309 TMTFQVNNSPFAGKEGKFLTSRQIRERLEKELQHNVALRV-EDTGDPDKFKVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL VSRP VI K ++GE +EP+E + +++EE +QG IM+KL R GDL
Sbjct: 368 SVLIENMRREGFELGVSRPEVILKEVDGEKHEPFEMVTIEVEETHQGSIMEKLGERKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEYR+PSRGLIGFQ EF+T T G+GL HVF+ Y P K +LG R
Sbjct: 428 LNMVPDGKGRVRLEYRVPSRGLIGFQTEFMTSTSGSGLFYHVFDHYGPM---KKGELGAR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+ GVLIS GKA+AY+L+ LQ+RG LF+ H D VYEGM++GIHSR NDL+VNP K KQL
Sbjct: 485 KRGVLISMTQGKALAYALFALQERGELFLVHADEVYEGMLVGIHSRANDLVVNPCKAKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++G+DE + L+ K+TLE A+EFI++DELVE+TPK+IRLRK+ L E+ERK+
Sbjct: 545 TNIRAAGTDENLILVPIQKMTLEQALEFIDEDELVEVTPKSIRLRKKLLLEHERKR 600
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F+ + + + N + IT L
Sbjct: 9 VAIIAHVDHGKTTLVDKLLQQSGTFAAHAKVAERVMDSNDLEKERGITILAKNTALDWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFALGLRPIVVI 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|254447643|ref|ZP_05061109.1| GTP-binding protein TypA/BipA [gamma proteobacterium HTCC5015]
gi|198262986|gb|EDY87265.1| GTP-binding protein TypA/BipA [gamma proteobacterium HTCC5015]
Length = 618
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/597 (58%), Positives = 460/597 (77%), Gaps = 7/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTF-RKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT RK+QN RIMDSN+ EKERGITI +KN +I +N
Sbjct: 23 AIIAHVDHGKTTLVDQLLQQSGTLGRKDQNAE-RIMDSNDQEKERGITILAKNTAISWND 81
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIVVV
Sbjct: 82 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLNPIVVV 141
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NKIDR ARP+WV+D FDLFD L AT+EQLDFP+IY SAL+GYA+E+ R G+M LF
Sbjct: 142 NKIDRPGARPDWVIDQVFDLFDALGATDEQLDFPIIYASALNGYASEDDTVRDGDMESLF 201
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ VP + + QLQ+ SL+Y+SY+G +GIGRI G + Q V +++ + K
Sbjct: 202 QAIVDRVPAPDVDLDGSFQLQVSSLDYNSYVGVMGIGRIKRGVLNRNQAVSVID-REGKT 260
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ QI + GL+RV V +A +GDI++ TG++ + I T+CDP+ LP L +DEPT
Sbjct: 261 RNGKVQQIFGYHGLERVEVEKAQAGDIIVFTGLDPLYISDTLCDPANVEALPALTVDEPT 320
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG++GK++T+RQIK RL+ E+ +N+ LRV + D + VSGRGELH
Sbjct: 321 VTMTFQVNTSPFAGQDGKYLTSRQIKERLEQELLHNVALRVEETDDPDK-FRVSGRGELH 379
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L +LIENMRREG+EL+VSRP V+ + ++GEL EPYE L VDIEE +QG +M++L R G+
Sbjct: 380 LGVLIENMRREGFELAVSRPEVVIREIDGELQEPYEQLTVDIEEQHQGAVMERLGQRKGE 439
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+ N++++ K R+R+++ IPSRGLIGFQ EF++LT GTGLI H F+ Y P K + +G+
Sbjct: 440 MTNMQMDGKGRIRIDFVIPSRGLIGFQTEFMSLTSGTGLIYHSFDHYGP---KLQGGIGE 496
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS GKA++Y+L+ LQ+RG+L + H D VYEGM+IGIHSRDNDL VNP+K KQ
Sbjct: 497 RKNGVLISIGQGKALSYALFNLQERGKLMVGHGDEVYEGMVIGIHSRDNDLTVNPLKAKQ 556
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTNIR++GSDE + L PI+ TLE A+EFI+DDELVE+TP+ IR+RK+FLKE+ERK+
Sbjct: 557 LTNIRAAGSDENLILTPPIRHTLEQALEFIDDDELVEVTPEYIRVRKKFLKEHERKR 613
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + GIT + N
Sbjct: 22 IAIIAHVDHGKTTLVDQLLQQSGTLGRKDQNAERIMDSNDQEKERGITILAKNTAISWND 81
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G+ IV +
Sbjct: 82 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLNPIVVV 141
Query: 176 NKIDK 180
NKID+
Sbjct: 142 NKIDR 146
>gi|258545351|ref|ZP_05705585.1| glutathione-disulfide reductase [Cardiobacterium hominis ATCC 15826]
gi|258519454|gb|EEV88313.1| glutathione-disulfide reductase [Cardiobacterium hominis ATCC 15826]
Length = 607
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/597 (58%), Positives = 455/597 (76%), Gaps = 7/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D L RQS T + + R+MDS ++E+ERGITI +KN +I +
Sbjct: 14 AIVAHVDHGKTTLVDQLFRQSDTLAERAEVYERMMDSMDLERERGITIMAKNTAIRWKDY 73
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER+LSMVD+VLLL+DA++GPMPQTRFVT+KA +G PIVV+N
Sbjct: 74 QINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFDMGLHPIVVIN 133
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR +WV++ TFDLFD+L AT+EQLDFP++Y S L+GYA +N R G+M PLFE
Sbjct: 134 KIDRPGARADWVLNETFDLFDRLGATDEQLDFPIVYASGLNGYAGDNPDIRTGDMTPLFE 193
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP N + P ++QI SL+YSSY G IGIGRI G I S V I+ G D
Sbjct: 194 AIVAHVPPPSVNRDAPFRMQISSLDYSSYTGVIGIGRIERGSISSNTPVKII-GRDGAVR 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI F GL++V V+ A +GDI+ TGI+ + I T+CDP+ LP L++DEPT+
Sbjct: 253 SGRVLQIFKFLGLEKVEVDNAAAGDIISFTGIDPLYISDTLCDPNHVEALPSLSVDEPTM 312
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGREGK++T+RQIK RLD E+ +N+ LRV + D ++VSGRGELHL
Sbjct: 313 SMTFQVNNSPFAGREGKYVTSRQIKERLDRELIHNVALRVEEMDDPDK-FKVSGRGELHL 371
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREGYEL VSRP VI+K ++GE +EPYE + +D++E +QG +M+++ R G+L
Sbjct: 372 SVLIETMRREGYELGVSRPEVIYKEVDGETHEPYELVVLDLDEQHQGAVMERMGERKGEL 431
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK- 1404
+N+ + K R+RLEY IP+RGLIGFQ EF+TLT G+GL F+ Y P K LGK
Sbjct: 432 RNMVPDGKGRIRLEYLIPTRGLIGFQTEFMTLTSGSGLKFQTFDHYGP----KKDGLGKT 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVL+S +GKA+AY+L+ LQDRGRLFI H D VYEGM+IGIHSRDNDL VNP+K KQ
Sbjct: 488 RHNGVLVSMATGKALAYALFNLQDRGRLFIGHGDEVYEGMVIGIHSRDNDLTVNPLKAKQ 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTNIR++GSDE + L PI+ TLE A+EFI+DDELVE+TPK+IR+RK++L ENERK+
Sbjct: 548 LTNIRAAGSDENLILTPPIRNTLEQALEFIDDDELVEVTPKSIRIRKKYLTENERKR 604
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYI-RKTNVVFSEAGGITQHIGAYNVVTNHG-------------- 116
+ I+ HVDHGKT+L+D + R+++ + A + + + ++ G
Sbjct: 13 IAIVAHVDHGKTTLVDQLFRQSDTLAERAEVYERMMDSMDLERERGITIMAKNTAIRWKD 72
Query: 117 -SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 73 YQINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFDMGLHPIVVI 132
Query: 176 NKIDKLDINLDRI 188
NKID+ D +
Sbjct: 133 NKIDRPGARADWV 145
>gi|115314623|ref|YP_763346.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. holarctica OSU18]
gi|115129522|gb|ABI82709.1| tyrosine phosphoprotein TypA [Francisella tularensis subsp.
holarctica OSU18]
Length = 605
Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 460/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WVVD FDLFD+L AT+EQLDFPVIY SA+ G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPGWVVDQVFDLFDRLGATDEQLDFPVIYASAIDGWATNDINQKKDDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + N P Q+QI SL+YS++ G IGIGRI G+IK+ V I+N +K
Sbjct: 189 AIVENVEHPNVDENGPFQMQISSLDYSNFTGTIGIGRIQRGKIKTNTPVTIVNVAGEK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 248 IGRVLQILGYLGLERNEVAEASAGDIVCVTGMERLKISDTLCNPEHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK RL+ E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKERLEKELIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+E++VSRP+VIFK ++GE +EPYE +DI+E +QG +M+K+ R G+L
Sbjct: 367 SILLENMRREGFEIAVSRPQVIFKDIDGEKHEPYEQAIIDIDEEHQGTVMEKMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K +L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQNLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S SGKA+A++L+ LQ+RGR+FI H VYEGMIIGIH+RDNDL+VNP K KQL
Sbjct: 484 QNGTLVSMVSGKALAFALFNLQERGRMFIGHGTDVYEGMIIGIHNRDNDLVVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DE + L+ PIK+TLEYA+EFI DDELVEITPK+IRLRK++L E++RKK
Sbjct: 544 TNIRASGKDEVVVLVPPIKLTLEYALEFIEDDELVEITPKSIRLRKKYLTESDRKK 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|121604912|ref|YP_982241.1| translation initiation factor IF-2 [Polaromonas naphthalenivorans
CJ2]
gi|189028340|sp|A1VNU2.1|IF2_POLNA RecName: Full=Translation initiation factor IF-2
gi|120593881|gb|ABM37320.1| bacterial translation initiation factor 2 (bIF-2) [Polaromonas
naphthalenivorans CJ2]
Length = 992
Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/539 (63%), Positives = 441/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+KSS VIK+LMKLGQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F ++
Sbjct: 427 MSIKSSEVIKHLMKLGQMVTINQPLDQDTAMIVVEEMGHTALTAALDDPEAFTADDVQGQ 486
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ++F
Sbjct: 487 -QAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVQTPRGMVSF 545
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HA+ +GVP++VAINKIDK
Sbjct: 546 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHARAAGVPIVVAINKIDK 605
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
INL+R+K +L++E V+PEE+GG SPF+ +SA TG GI+ LLE + LQAE+LELKA V
Sbjct: 606 PGINLERVKGELVTEGVVPEEFGGDSPFVPVSAHTGAGIDDLLEQVLLQAEVLELKASVD 665
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+ AKG++IE+RLDKG+GPVATVL+QSGTL+ D+V+AG++YGR+R+ML+ENGK I AGP
Sbjct: 666 SLAKGLVIEARLDKGRGPVATVLVQSGTLKAGDVVLAGSTYGRVRAMLDENGKPIKTAGP 725
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G++ V+ +E++ REI +R GKFR+ KL+KQ+ K ENMF+DIN
Sbjct: 726 SIPVEIQGLTEVPQAGDDFMVMTDERRVREIATYRAGKFRNTKLAKQQASKLENMFSDIN 785
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L IIIK DV GS+E L +SL LSTD+VK+Q++++ VG I+ESD+NLAIASKA+
Sbjct: 786 AGEVKMLPIIIKADVQGSQEALAQSLLKLSTDEVKVQLVYSGVGGISESDVNLAIASKAV 845
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN RADA RK A+ N I+IRY+NIIY+ + E+K+ ++ ++ +KKE ++G AEIR
Sbjct: 846 LIGFNTRADAQARKQAENNGIDIRYYNIIYDAVDELKAAMSGMLTPDKKEEIIGNAEIRN 905
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ V+K+ IAGC + G++RR +K+R+LR +I+TGELDSLKRFKD+ KEVK GFEC
Sbjct: 906 IFKVSKIGSIAGCMVTAGVVRRTAKVRLLRGNVVIFTGELDSLKRFKDDAKEVKEGFEC 964
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 499 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVQTPRGMVSF------------ 545
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A G +V +NK
Sbjct: 546 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHARAAGVPIVVAINK 602
Query: 1047 IDR 1049
ID+
Sbjct: 603 IDK 605
>gi|53803064|ref|YP_115246.1| GTP-binding protein TypA [Methylococcus capsulatus str. Bath]
gi|53756825|gb|AAU91116.1| GTP-binding protein TypA [Methylococcus capsulatus str. Bath]
Length = 606
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/596 (58%), Positives = 456/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF ++ + R+MDSN++EKERGITI +KN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFAAHERVGERVMDSNDLEKERGITILAKNTAIKWRDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA +G PIV++N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAMGLHPIVLIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR WV+D TFDLFD+L ATE QLDFPVIY SAL+GYA + +G + PLFE
Sbjct: 129 KIDRPGARAAWVLDQTFDLFDRLGATEAQLDFPVIYCSALNGYAGLSPDISEGTLEPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V +++ P Q+Q+ SL+Y+SY+G IGIGRI G +K V ++ D + +
Sbjct: 189 AIVNHVSPPDVDTDGPFQMQVSSLDYNSYVGVIGIGRITRGTVKRNTPVTLIK-RDGRQS 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
A+I Q+ F GL+R+ EA +GDI+ TGIE + I T+C LP L +DEPT+
Sbjct: 248 AARILQVLAFHGLERIEREEANAGDIIAFTGIEGLEISDTLCAVGFAEQLPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGREGKF+T+RQI++RL+ E+ +N+ LRV ++ D + VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGREGKFLTSRQIRDRLNRELIHNVALRV-EDTADPDKFTVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI + ++GE EPYE + +++EE +QG +M+KL R GDL
Sbjct: 367 SILIENMRREGYELAVSRPEVIIREIDGEPCEPYEFVTIEVEETHQGAVMEKLGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + + RVRLEY IPSRGLIGFQ EF+T T GTGL+ HVF+ Y P + +G+R
Sbjct: 427 RNMVPDGQGRVRLEYLIPSRGLIGFQTEFLTTTSGTGLLYHVFDHYGPIKRGA---IGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NG LIS +GKA+A+SL+ LQ+RGRLF+ H D VYEGM++G+H+R NDL+VNP K KQL
Sbjct: 484 TNGALISNTTGKALAFSLFNLQERGRLFVEHGDEVYEGMVVGVHTRGNDLVVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L IK TLE AIEFI+DDELVE+TP++IR+RK+ L+E+ERKK
Sbjct: 544 TNIRAAGSDENILLTPAIKFTLEQAIEFIDDDELVEVTPQSIRIRKKLLQEHERKK 599
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F+ + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFAAHERVGERVMDSNDLEKERGITILAKNTAIKWRD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAMGLHPIVLI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|56708247|ref|YP_170143.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110670718|ref|YP_667275.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis FSC198]
gi|254370733|ref|ZP_04986738.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis FSC033]
gi|254875067|ref|ZP_05247777.1| GTP-binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|379717482|ref|YP_005305818.1| BipA [Francisella tularensis subsp. tularensis TIGB03]
gi|379726086|ref|YP_005318272.1| BipA [Francisella tularensis subsp. tularensis TI0902]
gi|385794939|ref|YP_005831345.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis NE061598]
gi|421755825|ref|ZP_16192763.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis 80700075]
gi|56604739|emb|CAG45812.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110321051|emb|CAL09195.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis FSC198]
gi|151568976|gb|EDN34630.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis FSC033]
gi|254841066|gb|EET19502.1| GTP-binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|282159474|gb|ADA78865.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis NE061598]
gi|377827535|gb|AFB80783.1| GTP-binding protein TypA [Francisella tularensis subsp. tularensis
TI0902]
gi|377829159|gb|AFB79238.1| GTP-binding protein TypA [Francisella tularensis subsp. tularensis
TIGB03]
gi|409087313|gb|EKM87413.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. tularensis 80700075]
Length = 605
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 460/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WVVD FDLFD+L AT+EQLDFPVIY SA+ G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPGWVVDQVFDLFDRLGATDEQLDFPVIYASAIDGWATNDINQKKDDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + N P Q+QI SL+YS++ G IGIGRI G+IK+ V I+N +K
Sbjct: 189 AIVENVEHPNVDENGPFQMQISSLDYSNFTGTIGIGRIQRGKIKTNTPVTIVNVAGEK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 248 SGRVLQILGYLGLERNEVAEASAGDIVCVTGMEGLKISDTLCNPEHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK RL+ E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKERLEKELIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+E++VSRP+VIFK ++GE +EPYE +DI+E +QG +M+K+ R G+L
Sbjct: 367 SILLENMRREGFEIAVSRPQVIFKDIDGEKHEPYEQAIIDIDEEHQGTVMEKMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K +L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQNLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S SGKA+A++L+ LQ+RGR+FI H VYEGMIIGIH+R+NDL+VNP K KQL
Sbjct: 484 QNGTLVSMVSGKALAFALFNLQERGRMFIGHGTDVYEGMIIGIHNRNNDLVVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DEA+ L+ PIK+TLEYA+EFI DDELVEITPK+IRLRK++L E+ RKK
Sbjct: 544 TNIRASGKDEAVVLVPPIKLTLEYALEFIEDDELVEITPKSIRLRKKYLTESNRKK 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|56478755|ref|YP_160344.1| translation initiation factor IF-2 [Aromatoleum aromaticum EbN1]
gi|81821025|sp|Q5NZS1.1|IF2_AZOSE RecName: Full=Translation initiation factor IF-2
gi|56314798|emb|CAI09443.1| translation initiation factor IF-2 [Aromatoleum aromaticum EbN1]
Length = 945
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/564 (62%), Positives = 451/564 (79%), Gaps = 4/564 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLN-EYNK 59
MSVK++ VIK LMK+G MVTINQVLDQETAMILVEEMGH A A+KL+DP+++L + E +
Sbjct: 380 MSVKAAEVIKILMKMGSMVTINQVLDQETAMILVEEMGHKAFAAKLDDPDTYLESAEAHH 439
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
+ E RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +T
Sbjct: 440 DAAVEP--RAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETPRGMLT 497
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQTREAI HAK + VPL+VA+NKID
Sbjct: 498 FLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAANVPLVVAVNKID 557
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K D N DR+KQ+L++E V+PEEYGG FI++SAKTGVGI+ LLE + LQAE+LEL APV
Sbjct: 558 KPDANPDRVKQELVAEGVLPEEYGGDVMFINVSAKTGVGIDSLLEAVLLQAEVLELTAPV 617
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
+PAKG+IIE+RLDKG+GPVA++L+ SGTLR D+++ GA++GRIR+ML+ENGK I AG
Sbjct: 618 DSPAKGLIIEARLDKGRGPVASLLVLSGTLRKGDVMLVGATFGRIRAMLDENGKAIDHAG 677
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PSIPVE+ GL+ VP +G+E + +EKKAREI LFRQGK+R+VKL+KQ+ K E+MF +
Sbjct: 678 PSIPVEVLGLSDVPAAGDEAIALADEKKAREIALFRQGKYREVKLAKQQAAKLESMFEQM 737
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
+ +VK L +IIK DV GS+E L ++L LSTD+V++ IH+AVG I+ESD+NLA AS A
Sbjct: 738 AEGEVKTLPLIIKADVQGSQEALVQALNKLSTDEVRVNAIHSAVGAISESDVNLAQASGA 797
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+IIGFN RADA RKLA+ ++IRY+NIIY+ + E+K+ ++ ++ E++EN++GL E+R
Sbjct: 798 VIIGFNTRADAGARKLAETFGVDIRYYNIIYDAVDEVKAALSGMLAPERRENVIGLVEVR 857
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
QV V KV +AGCY+LEG+++R S++R+LRN +I GEL+SLKRFKD+VKEVK GFEC
Sbjct: 858 QVFKVPKVGTVAGCYVLEGVVKRGSQVRVLRNHVVIHNGELESLKRFKDDVKEVKFGFEC 917
Query: 540 ERLSRIENQIQRDISEIIAFDIQN 563
R N +Q ++ F+IQ
Sbjct: 918 GLSIRNFNDVQEG-DQLEVFEIQE 940
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 452 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETPRGMLTF------------ 498
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A +V VNK
Sbjct: 499 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTREAIHHAKAANVPLVVAVNK 555
Query: 1047 IDRSNARPEWV 1057
ID+ +A P+ V
Sbjct: 556 IDKPDANPDRV 566
>gi|171058384|ref|YP_001790733.1| translation initiation factor IF-2 [Leptothrix cholodnii SP-6]
gi|238689091|sp|B1XY67.1|IF2_LEPCP RecName: Full=Translation initiation factor IF-2
gi|170775829|gb|ACB33968.1| translation initiation factor IF-2 [Leptothrix cholodnii SP-6]
Length = 991
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/539 (63%), Positives = 434/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK S VIK LM+LGQMVTINQ LDQETAMI+VEEMGH A A+KL+DP++FL E N
Sbjct: 426 MSVKGSEVIKQLMRLGQMVTINQQLDQETAMIVVEEMGHKAFAAKLDDPDAFL-EEENLA 484
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
ESL R P+VT+MGHVDHGKTSLLDYIR + V EAGGITQHIGAY+V T G ITF
Sbjct: 485 EAGESLPRPPVVTVMGHVDHGKTSLLDYIRTSRVAAGEAGGITQHIGAYHVETPRGVITF 544
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAH+K +GVP++VAINKIDK
Sbjct: 545 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHSKAAGVPIVVAINKIDK 604
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D NLDR++ +L++E V+PEE+GG +PF +SAKTG GI+ LLE + LQAE+LEL AP
Sbjct: 605 PDSNLDRVRSELVAEGVVPEEFGGDAPFCLVSAKTGQGIDTLLEQVLLQAEVLELNAPQE 664
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE+RLDKG+GPVATVL+QSGTL+ D+V+AG SYGR+R+ML+E GK EAGP
Sbjct: 665 ALAKGLVIEARLDKGRGPVATVLVQSGTLKRGDVVLAGQSYGRVRAMLDETGKAAQEAGP 724
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI FRQGK+R+V L++++ K ENMF ++
Sbjct: 725 SIPVEIQGLTEVPSAGDEFMVLADERRAREIATFRQGKYREVNLNRRQAAKLENMFENMG 784
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + L +IIK DV GS+E L SL LSTD+VK+Q++H AVG I+ESD+NLA+ASKA+
Sbjct: 785 QGAAQTLALIIKADVQGSQEALAASLLKLSTDEVKVQIVHAAVGGISESDVNLALASKAV 844
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RKLA N++++RY+N+IY+ + EIKS ++ ++ E++E +G AEIR
Sbjct: 845 IIGFNVRADAGARKLADGNDVDLRYYNVIYDAVDEIKSAMSGMLAPEQREEAIGTAEIRT 904
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + K+ IAG + GL+RR+ + R+LRN +I+TGE+DS++R KD+VKEVK GFEC
Sbjct: 905 VFVATKIGTIAGSMVTSGLVRRNCRFRLLRNNIVIYTGEVDSVRRLKDDVKEVKEGFEC 963
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 906 FLHGQNLFLSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEI 965
FL +NL + E++ ++ HVDHGKT+L+D++ + I I + +
Sbjct: 477 FLEEENLAEAGESLPRPPVVTVMGHVDHGKTSLLDYIRTSRVAAGEAGGITQHI-GAYHV 535
Query: 966 EKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQ 1025
E RG+ F +DTPGH F R D V+L++ A +G MPQ
Sbjct: 536 ETPRGVITF---------------LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQ 580
Query: 1026 TRFVTRKALKLGFKPIVVVNKIDRSNA 1052
T+ + G +V +NKID+ ++
Sbjct: 581 TKEAIAHSKAAGVPIVVAINKIDKPDS 607
>gi|456062945|ref|YP_007501915.1| Translation initiation factor IF-2 [beta proteobacterium CB]
gi|455440242|gb|AGG33180.1| Translation initiation factor IF-2 [beta proteobacterium CB]
Length = 928
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/544 (63%), Positives = 441/544 (81%), Gaps = 11/544 (2%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VKS+ VIK LM +GQMVTINQ+LDQ+TAMI+VEEMGH AHA+KL+DP+ L
Sbjct: 363 MAVKSAEVIKLLMGMGQMVTINQILDQDTAMIIVEEMGHTAHAAKLDDPDLDL------G 416
Query: 61 IT---AESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
IT AE L R P+VT+MGHVDHGKTSLLD IR V EAGGITQHIGAY+V T G
Sbjct: 417 ITGHDAELLPRPPVVTVMGHVDHGKTSLLDKIRAAKVATGEAGGITQHIGAYHVETPRGM 476
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
ITFLDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI HA GVP++VAINK
Sbjct: 477 ITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHAVAGGVPIVVAINK 536
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
IDK + N +R+K +L++EQV+PEEYGG PFI +SAKTG GI+ LLEN+ LQAEILELKA
Sbjct: 537 IDKPEANSERVKTELVAEQVVPEEYGGDVPFIGVSAKTGEGIDALLENVLLQAEILELKA 596
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILE 297
PA+G++IE+RLDKG+GPVAT+L+QSGTL+ D+++AG++YGR+R+ML+ENGK E
Sbjct: 597 AKDAPAQGLVIEARLDKGRGPVATILVQSGTLKRGDMLLAGSTYGRVRAMLDENGKPCNE 656
Query: 298 AGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFN 357
AGPSIPVEIQGL++VP +GE + V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E M
Sbjct: 657 AGPSIPVEIQGLSEVPAAGESVQVVPDERKAREIALFRQGKFRDVKLAKQQAFKLETMME 716
Query: 358 DINKEKV--KNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAI 415
++ + + K L +IIK DV GS+E L++SL+ LST +VK+Q++H AVG I E+D+NLA+
Sbjct: 717 NMEEGAIEAKLLPLIIKADVQGSQEALSQSLQKLSTAEVKVQIVHAAVGGITETDVNLAV 776
Query: 416 ASKAIIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGL 475
ASKA+IIGFN RAD + RKLA+ N ++IRYHNIIY+ + E+K+ ++ ++ +KKE + G+
Sbjct: 777 ASKAVIIGFNSRADGAARKLAENNGVDIRYHNIIYDAVDEVKAALSGMLTPDKKEEITGM 836
Query: 476 AEIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKA 535
EIRQV LV+KV IAGC +L+G+I+R+S +R+LR+ +IWTGELDSLKRFKD+ K+V+A
Sbjct: 837 VEIRQVFLVSKVGAIAGCLVLDGIIKRNSSVRLLRDNVVIWTGELDSLKRFKDDAKDVRA 896
Query: 536 GFEC 539
G EC
Sbjct: 897 GVEC 900
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D + + I I + +E RG+ F
Sbjct: 433 VMGHVDHGKTSLLDKIRAAKVATGEAGGITQHI-GAYHVETPRGMITF------------ 479
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A+ G +V +NK
Sbjct: 480 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHAVAGGVPIVVAINK 536
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A E V T + +++ E D P I SA G
Sbjct: 537 IDKPEANSERV--KTELVAEQVVPEEYGGDVPFIGVSAKTG 575
>gi|187931563|ref|YP_001891547.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. mediasiatica FSC147]
gi|187712472|gb|ACD30769.1| GTP binding translational elongation factor Tu and G family protein
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 605
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 459/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WVVD FDLFD+L AT+EQLDFPVIY SA+ G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPGWVVDQVFDLFDRLGATDEQLDFPVIYASAIDGWATNDINQKKDDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + N P Q+QI SL+YS++ G IGIGRI G+IK+ V I+N +K
Sbjct: 189 AIVENVKHPNVDENGPFQMQISSLDYSNFTGTIGIGRIQRGKIKTNTPVTIVNVAGEK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 248 SGRVLQILGYLGLERNEVAEASAGDIVCVTGMEGLKISDTLCNPEHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T RQIK RL+ E+ N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTLRQIKERLEKELIYNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+E++VSRP+VIFK ++GE +EPYE +DI+E +QG +M+K+ R G+L
Sbjct: 367 SILLENMRREGFEIAVSRPQVIFKDIDGEKHEPYEQAIIDIDEEHQGTVMEKMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y P K +L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGPM---KKQNLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S SGKA+A++L+ LQ+RGR+FI H VYEGMIIGIH+RDNDL+VNP K KQL
Sbjct: 484 QNGTLVSMVSGKALAFALFNLQERGRMFIGHGTDVYEGMIIGIHNRDNDLVVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DEA+ L+ PIK+TLEYA+EFI D+ELVEITPK+IRLRK++L E++RKK
Sbjct: 544 TNIRASGKDEAVVLVPPIKLTLEYALEFIEDNELVEITPKSIRLRKKYLTESDRKK 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|375105987|ref|ZP_09752248.1| translation initiation factor IF-2 [Burkholderiales bacterium
JOSHI_001]
gi|374666718|gb|EHR71503.1| translation initiation factor IF-2 [Burkholderiales bacterium
JOSHI_001]
Length = 955
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/539 (62%), Positives = 437/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S VIK +MKLGQMVTINQ LDQETAMI+VEEMGH A A+KL+DPE+F E
Sbjct: 390 MSVKASEVIKQMMKLGQMVTINQQLDQETAMIVVEEMGHKALAAKLDDPEAFSEEEAAAQ 449
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
T E + RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 450 -TGELISRAPVVTVMGHVDHGKTSLLDYIRRARVAAGEAGGITQHIGAYHVETPRGMITF 508
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VA+NKIDK
Sbjct: 509 LDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHAKAAGVPIVVAMNKIDK 568
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N++R+K +L++EQV+PE++GG SPF+++SAKTG G++ LLE + LQAE+LELKAP
Sbjct: 569 PEANVERLKSELVAEQVVPEDFGGESPFVAVSAKTGQGVDDLLEQVLLQAEVLELKAPTE 628
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
A+G+++E++LDKG+GPVATVLIQSGTLR D+V+AGASYGR+R+ML+E+GK I EAGP
Sbjct: 629 AAARGLVVEAQLDKGRGPVATVLIQSGTLRRGDVVLAGASYGRVRAMLDEDGKAIQEAGP 688
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI FRQGK+RDVKL+KQ+ K ENMF +
Sbjct: 689 SIPVEIQGLTEVPQAGDEFMVLTDERRAREIATFRQGKYRDVKLAKQQAAKLENMFETMG 748
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ L +IIK DV GS+E L SL LSTD+VK+Q++H AVG I+ESD+NL IASKA+
Sbjct: 749 AGSAQTLSLIIKADVQGSQEALASSLLKLSTDEVKVQIVHAAVGGISESDVNLGIASKAV 808
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ ++IRY+NIIY+ + E+K+ +T ++ E+KE ++G+AEIR
Sbjct: 809 IIGFNTRADAGARKLAEHTGVDIRYYNIIYDAVDEVKAAMTGMLAPEQKEEVIGMAEIRT 868
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AGC + G + R+++ R+LR+ +I+TGEL+SLKR KD+V+EV GFEC
Sbjct: 869 VFVASKIGTVAGCMVTNGKVTRNARFRLLRDNVVIYTGELESLKRMKDDVREVAEGFEC 927
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 462 VMGHVDHGKTSLLDYIRRARVAAGEAGGITQHI-GAYHVETPRGMITF------------ 508
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGHA F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 509 ---LDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHAKAAGVPIVVAMNK 565
Query: 1047 IDRSNA 1052
ID+ A
Sbjct: 566 IDKPEA 571
>gi|344941466|ref|ZP_08780754.1| GTP-binding protein TypA [Methylobacter tundripaludum SV96]
gi|344262658|gb|EGW22929.1| GTP-binding protein TypA [Methylobacter tundripaludum SV96]
Length = 603
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/596 (58%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + + RIMDSN+IEKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFAAHAKVTERIMDSNDIEKERGITILAKNTALDWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD TFDLFD+L AT+EQLDFP++Y SA++GYA G+M PLFE
Sbjct: 129 KIDRPGARPDWVVDQTFDLFDRLGATDEQLDFPIVYASAINGYAGLEHTITGGDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + P Q+Q+ SL+Y++Y G IGIGRI G IK +VI+N +
Sbjct: 189 TIISKVSPPPVDIDGPFQMQVTSLDYNTYTGVIGIGRIQRGTIKPNMPLVIVN-REGVER 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K ++ Q+ F GLDRV V EA +GDI+ GIE++ I TIC P + L++DEPT+
Sbjct: 248 KGRMLQVYGFHGLDRVEVQEARAGDIIAFAGIEKLEISDTICHPDSVEAMTPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP AGREGKF+TTRQI++RLD E+++N+ L+V ++ D ++VSGRGELHL
Sbjct: 308 TMTFQVNNSPFAGREGKFVTTRQIRDRLDKELQHNVALKV-EDTGDPDKFKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E+ VSRP VI K ++G+ EP+E + +++EEI+QG IM+KL R GDL
Sbjct: 367 SVLIENMRREGFEMGVSRPEVILKEIDGKKCEPFEMVTIEVEEIHQGTIMEKLGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RLEY +PSRGLIGFQ EF+T T G+GL+ HVF+ Y P ++G R
Sbjct: 427 TNMVPDGKGRIRLEYMMPSRGLIGFQTEFMTATSGSGLLYHVFDHYGPM---KPGEVGSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+ GV+IS +GKAV YSL LQ+RG L + + D VYEGM++G+HSR NDL VNP K KQL
Sbjct: 484 QRGVMISMVAGKAVTYSLHPLQERGELLLVNGDEVYEGMLVGLHSRSNDLTVNPCKPKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DE++ L K+TLE A+EFI +DELVE+TPK+IRLRK++L ENERK+
Sbjct: 544 TNVRASGTDESLVLARIQKMTLEQALEFIAEDELVEVTPKSIRLRKKYLTENERKR 599
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F+ +T+ I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFAAHAKVTERIMDSNDIEKERGITILAKNTALDWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFALGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|28056476|gb|AAO28369.1| GTP-binding elongation factor protein [Xylella fastidiosa Temecula1]
Length = 617
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/600 (57%), Positives = 461/600 (76%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGTF + + R+MDSN+ EKERGITI +KN +I++NG
Sbjct: 18 AIVAHVDHGKTTLVDQLLKQSGTFSERAQVGERVMDSNDQEKERGITILAKNTAIKWNGN 77
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 78 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 137
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA+ S AR G+M PL+E
Sbjct: 138 KIDRPGARPDWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYASLESSARAGDMNPLYE 197
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + + P Q++I L+Y+SY+G IGIGRI G++ + V +++ +K N
Sbjct: 198 AIMQHVQPPQVDLHGPFQMRISQLDYNSYVGLIGIGRIQRGKVSTNMPVTVIDRMGNKHN 257
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ F GL+R V EA +GDIV I+GIE + I T+ DP+ P+ LP L++DEPT+
Sbjct: 258 -GKVLQVLGFLGLERHEVEEAQAGDIVAISGIESLSISDTLTDPTAPDALPALSVDEPTI 316
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG++ GKF+T+RQI+ RL E +N+ LRV ++ D ++VSGRG
Sbjct: 317 SMTFQVNNSPFAGQKEYSGGKFLTSRQIRERLARETLHNVALRV-EDTEDPDRFKVSGRG 375
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIE MRREGYEL VSRP VI K ++G L EPYE L VD+EE +QG ++++L R
Sbjct: 376 ELHLSVLIETMRREGYELGVSRPEVIIKEIDGILQEPYEQLVVDVEEEHQGGVIERLGTR 435
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
L N+E++ K RVRL+Y IP+RGLIGFQ EF T+T G+GL+ H+F+ Y P K+
Sbjct: 436 KAQLSNMELDGKGRVRLDYIIPARGLIGFQTEFKTITSGSGLLFHIFDHYGP---KADGP 492
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+IS GKA Y+L LQ+RGRL I+ + +YEGM++GIHS+DNDL VN ++
Sbjct: 493 IAKRINGVMISNGHGKAPGYALMGLQERGRLLIDAGEDIYEGMLVGIHSKDNDLTVNALR 552
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
EKQLTNIR+SG D+AI L PIK++LE A+EFI DDELVE+TPK IRLRK++L EN+RK+
Sbjct: 553 EKQLTNIRASGKDDAISLTPPIKMSLEQALEFIEDDELVEVTPKAIRLRKKYLSENDRKR 612
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + FSE + + + N + N
Sbjct: 17 IAIVAHVDHGKTTLVDQLLKQSGTFSERAQVGERVMDSNDQEKERGITILAKNTAIKWNG 76
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G IV +
Sbjct: 77 NRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 136
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 137 NKIDRPG-----ARPDWVVEQV 153
>gi|114561512|ref|YP_749025.1| GTP-binding protein TypA [Shewanella frigidimarina NCIMB 400]
gi|114332805|gb|ABI70187.1| GTP-binding protein TypA [Shewanella frigidimarina NCIMB 400]
Length = 603
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D +L QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKMLAQSGTLASRGEATERVMDSNDLEKERGITILAKNTAIQWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +ARP+WV+D FDLF L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 129 KIDRPSARPDWVIDQVFDLFVNLGATDEQLDFPIVYASALNGFATLDPDVASDDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ P Q+QI ++Y+SY+G IGIGRI G +K+ Q V I+ G D K
Sbjct: 189 TIVEKVAFPDADAEAPFQMQISQIDYNSYVGVIGIGRITRGSVKTNQQVTII-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V A +GDIV ITG+ E+ I TIC + +P L +DEPTL
Sbjct: 248 NGKMGQVLGYMGLDRTEVPIANAGDIVAITGLGELKISDTICAVNAVEAMPPLTVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQTELVHNVALRVEETESPDR-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL+EPYE + VD+EE +QG +++KL R G++
Sbjct: 367 SILIENMRREGYELAVSRPEVILKTIDGELHEPYETVTVDVEEEHQGTVIEKLGVRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 427 KDMQLDGKGRVRIDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGR+FI H VYEG ++GIH+R NDL VN +K KQL
Sbjct: 484 ANGVLISNATGKALTFALFALQDRGRMFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TPKNIR+RKRFL ENERK+
Sbjct: 544 TNMRASGTDEAQVLTTPINLTLEQALEFIDDDELVEVTPKNIRVRKRFLTENERKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKMLAQSGTLASRGEATERVMDSNDLEKERGITILAKNTAIQWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|77747643|ref|NP_778720.2| GTP-binding elongation factor protein [Xylella fastidiosa Temecula1]
gi|182681048|ref|YP_001829208.1| GTP-binding protein TypA [Xylella fastidiosa M23]
gi|417558959|ref|ZP_12209918.1| membrane GTPase [Xylella fastidiosa EB92.1]
gi|71729113|gb|EAO31237.1| Small GTP-binding protein domain:GTP-binding protein TypA [Xylella
fastidiosa Ann-1]
gi|182631158|gb|ACB91934.1| GTP-binding protein TypA [Xylella fastidiosa M23]
gi|338178541|gb|EGO81527.1| membrane GTPase [Xylella fastidiosa EB92.1]
Length = 609
Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/600 (57%), Positives = 461/600 (76%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGTF + + R+MDSN+ EKERGITI +KN +I++NG
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTFSERAQVGERVMDSNDQEKERGITILAKNTAIKWNGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA+ S AR G+M PL+E
Sbjct: 130 KIDRPGARPDWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYASLESSARAGDMNPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + + P Q++I L+Y+SY+G IGIGRI G++ + V +++ +K N
Sbjct: 190 AIMQHVQPPQVDLHGPFQMRISQLDYNSYVGLIGIGRIQRGKVSTNMPVTVIDRMGNKHN 249
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ F GL+R V EA +GDIV I+GIE + I T+ DP+ P+ LP L++DEPT+
Sbjct: 250 -GKVLQVLGFLGLERHEVEEAQAGDIVAISGIESLSISDTLTDPTAPDALPALSVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG++ GKF+T+RQI+ RL E +N+ LRV ++ D ++VSGRG
Sbjct: 309 SMTFQVNNSPFAGQKEYSGGKFLTSRQIRERLARETLHNVALRV-EDTEDPDRFKVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIE MRREGYEL VSRP VI K ++G L EPYE L VD+EE +QG ++++L R
Sbjct: 368 ELHLSVLIETMRREGYELGVSRPEVIIKEIDGILQEPYEQLVVDVEEEHQGGVIERLGTR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
L N+E++ K RVRL+Y IP+RGLIGFQ EF T+T G+GL+ H+F+ Y P K+
Sbjct: 428 KAQLSNMELDGKGRVRLDYIIPARGLIGFQTEFKTITSGSGLLFHIFDHYGP---KADGP 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+IS GKA Y+L LQ+RGRL I+ + +YEGM++GIHS+DNDL VN ++
Sbjct: 485 IAKRINGVMISNGHGKAPGYALMGLQERGRLLIDAGEDIYEGMLVGIHSKDNDLTVNALR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
EKQLTNIR+SG D+AI L PIK++LE A+EFI DDELVE+TPK IRLRK++L EN+RK+
Sbjct: 545 EKQLTNIRASGKDDAISLTPPIKMSLEQALEFIEDDELVEVTPKAIRLRKKYLSENDRKR 604
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + FSE + + + N + N
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTFSERAQVGERVMDSNDQEKERGITILAKNTAIKWNG 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 129 NKIDRPG-----ARPDWVVEQV 145
>gi|350563451|ref|ZP_08932273.1| GTP-binding protein TypA [Thioalkalimicrobium aerophilum AL3]
gi|349779315|gb|EGZ33662.1| GTP-binding protein TypA [Thioalkalimicrobium aerophilum AL3]
Length = 607
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + +++ R+MDSN+ E+ERGITI SKN ++ +NG
Sbjct: 10 AIIAHVDHGKTTLVDQLLRQSGTLDQRKDLGERVMDSNDQERERGITILSKNTAVNWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAVEGPMPQTRFVT+KAL+ G KPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTQKALQQGLKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD TFDLFD+L AT+EQ+DFP+++ S +GYA +S R G+M P+FE
Sbjct: 130 KVDRDAARPDWVVDQTFDLFDRLGATDEQMDFPILFASGFNGYAGRDSDVRSGDMTPIFE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ VP + P QLQ ISL Y +Y G IG GRI G ++S V +++ +K N
Sbjct: 190 TIVEKVPAPDVDLAGPFQLQCISLAYDTYKGVIGTGRIKRGAVQSGMSVAVVDKDGNKRN 249
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AKI ++ F GLDRV VNEA +GDIV +G++ + I T+CD + P GLP L +DEPT+
Sbjct: 250 -AKIAELFGFHGLDRVNVNEAHAGDIVAFSGLDPMNISDTLCDINHPEGLPALKVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK +T+RQI+ RLD E+ N+ LRV ++ D + + VSGRGELHL
Sbjct: 309 SMTFQVNTSPFVGQEGKLLTSRQIRERLDKELLTNVALRV-EDTEDANKFRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL VSRP VIF+ ++GE+ EPYE L VD+ E NQG +M++L R +
Sbjct: 368 SVLIETMRREGFELGVSRPEVIFREIDGEVCEPYETLTVDVPEENQGTVMEQLGMRKAIM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + RVR+++ IPSRGLIG++ EF+T T+G GLI F Y P ++ S +G+R
Sbjct: 428 SDMVPDGQGRVRIDFMIPSRGLIGYRTEFMTATQGNGLIFSSFSHYGPKFDGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLI+ +GKA+ ++L+ LQ+RGRLFI H D VYEG +IG+HSR+NDL VN +K KQL
Sbjct: 485 SRGVLIAMSTGKALGFALFNLQERGRLFIGHGDEVYEGQVIGLHSRENDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L PI+ TLE A+EFI+DDELVE+TP+++R+RK+ L EN+RK+
Sbjct: 545 TNMRASGTDEAIVLTPPIRFTLEQALEFIDDDELVEVTPQSVRIRKKHLTENDRKR 600
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + + + N IT L
Sbjct: 9 IAIIAHVDHGKTTLVDQLLRQSGTLDQRKDLGERVMDSNDQERERGITILSKNTAVNWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 69 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTQKALQQGLKPIVVV 128
Query: 176 NKIDKLDINLDRIKQDLISEQVI 198
NK+D+ D + D + +Q
Sbjct: 129 NKVDR-----DAARPDWVVDQTF 146
>gi|375335479|ref|ZP_09776823.1| GTP-binding protein TypA [Succinivibrionaceae bacterium WG-1]
Length = 612
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/600 (58%), Positives = 450/600 (75%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT ++ R+MDSN+IEKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLDRSTAGEERVMDSNDIEKERGITILAKNTAIQWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA K G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFKQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WV+D FDLFD L AT+EQLDFP+IYTSAL+GYA + NM LFE
Sbjct: 129 KIDRPGARPNWVIDQVFDLFDNLGATDEQLDFPIIYTSALNGYATLDPDTPTDNMNALFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYV K + + Q+QI L+YSSY+G IG+GRI G +K+ V I++ PD
Sbjct: 189 AIIKYVEPPKADPDGDFQMQISQLDYSSYVGVIGVGRITRGSVKTNMPVTIVS-PDGSTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+R V EA +GDIV ITG+ E+ I T+C S LP L +DEPT+
Sbjct: 248 NGKVGQVLGYLGLNRSEVAEAKAGDIVAITGLGELKISDTVCASSNVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKFIT+R I RL E+ +N+ LRV + +D ++VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKFITSRNILERLQSELTHNVALRV-EPTNDPDKFKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++G+ EP ENL +DIEE +QG +M++L R +L
Sbjct: 367 SILIENMRREGYELAVSRPEVIVKVVDGQKLEPMENLTIDIEEQHQGSVMEQLGTRKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR++Y IPSRGLIGFQ EF+TLT GTGL+ H F+ Y + +G+R
Sbjct: 427 KDMVPDGKGRVRIDYIIPSRGLIGFQTEFMTLTSGTGLMYHTFDSYGEWKGGV---IGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+IS +GKA+ Y++W LQDRGR+FI H +YEG I+GIH+RDNDL VN ++ K+L
Sbjct: 484 KNGVMISNSTGKALGYAIWYLQDRGRMFIEHAQEIYEGQIVGIHNRDNDLTVNALRAKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEAI L+ IK +LE A+EFIN+DELVE+TPK+IRLRK+ L E ER + +
Sbjct: 544 TNVRASGTDEAIVLVPAIKFSLEQALEFINNDELVEVTPKSIRLRKKLLTELERVRAFRE 603
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLDRSTAGEERVMDSNDIEKERGITILAKNTAIQWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFKQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|114568890|ref|YP_755570.1| GTP-binding protein TypA [Maricaulis maris MCS10]
gi|114339352|gb|ABI64632.1| GTP-binding protein TypA [Maricaulis maris MCS10]
Length = 608
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 454/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + N++ R+MDSN++EKERGITI +KN ++ +N
Sbjct: 12 AIVAHVDHGKTTLVDQLLQQSGTLGERANVSERMMDSNDLEKERGITILAKNTAVTWNDW 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAV+GPMPQT FVT+KAL G KPIVV+N
Sbjct: 72 NINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVDGPMPQTSFVTKKALARGLKPIVVIN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K DR +ARP+WVVD TFDLFD+L A EEQLDFPV+Y SAL G+A + +M PLFE
Sbjct: 132 KADRPSARPDWVVDQTFDLFDRLGANEEQLDFPVVYASALQGWAANEAGVIGTDMKPLFE 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I + P + + PLQLQ+ +L+YSS+ G IGIGR+ GR+ Q V + D +
Sbjct: 192 MITAHTPRPDVDLDGPLQLQVSALDYSSFTGVIGIGRVARGRVARNQPVTVAKA-DGRQV 250
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ QI F GL+R+ + A +GDI+ TGI+ + I T+CDP LP+L++DEPTL
Sbjct: 251 RGKVQQIFGFHGLERIELESAQAGDIITFTGIDNLKISDTLCDPDNVEALPLLSVDEPTL 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AGREGKF+T+R +K RL+ E+ +N+ L+V Q + D + VSGRGELHL
Sbjct: 311 SMTFQVNDSPFAGREGKFVTSRNLKERLERELIHNVALKVEQQDNPDK-FTVSGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREG+EL+V RPRV+ K ++GE EPYE+L VD+EE +QG +M+KL R ++
Sbjct: 370 SILIETMRREGFELAVGRPRVVIKEIDGEQCEPYESLTVDLEEDHQGGVMEKLGQRKAEM 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + RVR++Y IP+RGLIGF++EF+TLT GTGL+ H F+ YAP K+ ++G+R
Sbjct: 430 KNMVPDGHGRVRIDYVIPTRGLIGFRSEFLTLTSGTGLMFHTFDHYAP---KTGGEIGQR 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+G ++S GK + ++L+ LQ+RG+LF+ H VYEGMIIG++SRD+D++VNP K K+L
Sbjct: 487 HHGAMVSMIDGKVLGFALFNLQERGKLFVGHAVEVYEGMIIGVNSRDDDMIVNPTKGKKL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DE I L +PIK+TLEYA+EFINDDELVE+TP+ IR+RK FLKE+ERKK
Sbjct: 547 TNMRASGTDENIVLTTPIKLTLEYALEFINDDELVEVTPQTIRIRKTFLKEHERKK 602
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + + + E +++ + N V N
Sbjct: 11 IAIVAHVDHGKTTLVDQLLQQSGTLGERANVSERMMDSNDLEKERGITILAKNTAVTWND 70
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+I +DTPGH F R + D V+L+V A DG MPQT A G+ IV I
Sbjct: 71 WNINIVDTPGHADFGGEVERVLSMVDGVLLLVDAVDGPMPQTSFVTKKALARGLKPIVVI 130
Query: 176 NKIDKLDINLDRI 188
NK D+ D +
Sbjct: 131 NKADRPSARPDWV 143
>gi|289207390|ref|YP_003459456.1| GTP-binding protein TypA [Thioalkalivibrio sp. K90mix]
gi|288943021|gb|ADC70720.1| GTP-binding protein TypA [Thioalkalivibrio sp. K90mix]
Length = 605
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 455/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + RIMDSN IEKERGITI +KN +IE+
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTLDARGDHGERIMDSNAIEKERGITILAKNTAIEWQDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAMGFKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+W VD FDLFD+L AT+EQLDFP+++ SAL+G+A +S +G+M L E
Sbjct: 129 KVDRPGARPDWAVDQVFDLFDRLGATDEQLDFPIVFASALNGFAGMDSSVTEGDMTCLLE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+++V +++ P Q+Q+ SL+Y+SY G IGIGR+ GRIK V +++ + K
Sbjct: 189 TIVEHVSPPNVDADGPFQMQVSSLDYNSYQGLIGIGRVKRGRIKPNTPVKVVD-REGKVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI F GL+RV V EA +GDI+ TG++E+ I T+CDP+ + L +DEPT+
Sbjct: 248 NGRMLQIMGFHGLERVEVAEARAGDIITFTGMDELYISDTLCDPNNVEAMEPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AGREGK++T+R +++RL E+K+N+ LRV + D ++VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGREGKYVTSRVLRDRLLEELKHNVALRVEETDDADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL VSRP V+ K ++G EPYE + VD+EE +QG IM+KL R GD+
Sbjct: 367 GILIENMRREGYELGVSRPEVVIKEVDGVKQEPYEAVTVDVEEQHQGTIMEKLGERRGDM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ IPSRGLIGFQ EF+T T GTG++ H+F+ Y P+ + + R
Sbjct: 427 TNMVPDGKGRVRLDFIIPSRGLIGFQTEFMTATSGTGILHHIFDHYGPYQPGA---VASR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ ++L+ LQDRG+LFI D VYEGM+IG+HSR+NDL+VN +K KQL
Sbjct: 484 QNGVLIANAAGKALGFALFNLQDRGKLFIGPGDEVYEGMVIGLHSRENDLVVNALKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++G+DE IQL PI++TLE AIEFI+DDELVE+TP+N+R+RK+FL E+ERKK
Sbjct: 544 TNIRAAGTDENIQLTPPIRMTLEQAIEFIDDDELVEVTPENLRIRKKFLLEHERKK 599
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTLDARGDHGERIMDSNAIEKERGITILAKNTAIEWQD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAMGFKPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|335419647|ref|ZP_08550696.1| GTP-binding protein TypA [Salinisphaera shabanensis E1L3A]
gi|334896179|gb|EGM34333.1| GTP-binding protein TypA [Salinisphaera shabanensis E1L3A]
Length = 609
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/602 (57%), Positives = 461/602 (76%), Gaps = 11/602 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF + + RIMDSN++EKERGITI SKN +IE+
Sbjct: 9 AIIAHVDHGKTTLVDCLLRQSGTFEAREEVADRIMDSNDLEKERGITITSKNTAIEWRDP 68
Query: 986 ------RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA +LG K
Sbjct: 69 DSDENYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFELGLK 128
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVV+NKIDR ARP+WV+ TFDLFD L AT+EQLDFP +YTSAL GYA R G+
Sbjct: 129 PIVVINKIDRDGARPDWVLTQTFDLFDSLGATDEQLDFPTVYTSALGGYAGLEDDVRDGD 188
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLF I++ VP ++ P Q+QI +L+Y+S++G+IGIGRI G IK + I++
Sbjct: 189 MKPLFRTIVERVPSPPVKTDGPFQMQITTLDYNSFVGQIGIGRIARGSIKPATQITIVDR 248
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+K N AK+ + F GL+RV V++A +GDIV +TG++ + I T+CD S P L L
Sbjct: 249 EGNKRN-AKVAGVFGFLGLNRVEVDQAQAGDIVALTGMDGLDISDTLCDTSAPEALTPLT 307
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPT+++ F VN SPLAG++G ++T+RQI+ RL E+K+N+ +RV + +D ++VSG
Sbjct: 308 VDEPTMSMTFEVNKSPLAGKDGDYLTSRQIRERLFRELKSNVAMRV-ETGNDPDRFKVSG 366
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RG LHL++L+E MRREGYELSVSRP+V+ + ++GE++EPYE L DIE+ +QG ++ LN
Sbjct: 367 RGLLHLSVLLETMRREGYELSVSRPQVVTREVDGEIHEPYELLICDIEDGHQGAVIDNLN 426
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
R G L+N++ + R RLE+ IPSRGLIGFQ EF++LT GTG+++HVF+ Y P ++
Sbjct: 427 QRRGQLRNMQPDGNGRTRLEFIIPSRGLIGFQTEFMSLTSGTGIVTHVFDHYGPLGGEA- 485
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
+G+R +GVLIS +GKAV ++L+ LQDRG++ ++ ND VYEGM++GIHSR+NDL VN
Sbjct: 486 --IGQRHSGVLISNAAGKAVGFALFNLQDRGKMMVSPNDEVYEGMVVGIHSRENDLTVNV 543
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
+K KQLTN+R++G+DE I L P+++TLE A+EFINDDELVEITP N+R+RKR+LKE+ER
Sbjct: 544 LKAKQLTNVRAAGTDENINLTPPLRMTLEQALEFINDDELVEITPSNVRVRKRWLKEHER 603
Query: 1520 KK 1521
KK
Sbjct: 604 KK 605
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 58/131 (44%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF----------- 120
+ I+ HVDHGKT+L+D + + + F + I N + IT
Sbjct: 8 IAIIAHVDHGKTTLVDCLLRQSGTFEAREEVADRIMDSNDLEKERGITITSKNTAIEWRD 67
Query: 121 -----------LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
+DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 68 PDSDENYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFELGL 127
Query: 170 PLIVAINKIDK 180
IV INKID+
Sbjct: 128 KPIVVINKIDR 138
>gi|406915419|gb|EKD54505.1| hypothetical protein ACD_60C00078G0006 [uncultured bacterium]
Length = 605
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/596 (58%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+Q+ + K R+MDSN++E+ERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQTASLSKKVTNTERVMDSNDLERERGITILAKNTALKWNNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFDKL AT++QLDFP++YTSAL GYA + K +M PLFE
Sbjct: 129 KIDRPGARPDWVVDQVFDLFDKLGATDKQLDFPIVYTSALLGYAKLDLKDESSDMKPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + N Q+QI +L+YSSY+G IGIGRI G+ K+ + +++ D K
Sbjct: 189 TIVNCVPAPDVDPNGAFQMQISTLDYSSYVGMIGIGRIKRGQAKTNLPITVIDR-DGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +I Q+ + GL+R V A +GDIV ITGI+ + I T+CDP+ LP L++DEPT+
Sbjct: 248 QGRILQVLEYLGLERSEVASANAGDIVAITGIDALKISDTLCDPAHVEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AG+EGKF+T+R+I+ RL+ E+ +N+ LRV ++ D ++VSGRGELHL
Sbjct: 308 SMTFQVNTSPFAGKEGKFVTSRKIRERLEQELLHNVALRV-EDTADPDKFKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +NGE++EPYE + VDIE +QG IM++L R GDL
Sbjct: 367 SILIENMRREGFELAVSRPEVITKKVNGEIHEPYETMTVDIETTHQGAIMEQLGSRRGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ ++K RVRL+Y IP+R LIGF EF+T+T GTGL+ HVF Y P K + +R
Sbjct: 427 KNMMSDDKGRVRLDYVIPARALIGFHTEFLTMTSGTGLLHHVFSHYGPAV---KGEFAQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ G A+AY+LW LQ+RGR+ I VYEGM++GIH+RDNDL+VN K KQL
Sbjct: 484 QNGVLIANQQGVALAYALWNLQERGRMIIGPQTEVYEGMVVGIHTRDNDLVVNVCKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L PIK++LE A+EFI+DDELVEITP IR+RK+FLKE+ERK+
Sbjct: 544 TNIRAAGSDENILLTPPIKMSLEQALEFIDDDELVEITPGTIRIRKKFLKEHERKR 599
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + S+ T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQTASLSKKVTNTERVMDSNDLERERGITILAKNTALKWNN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|77747534|ref|NP_298503.2| GTP-binding elongation factor protein [Xylella fastidiosa 9a5c]
Length = 609
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/600 (57%), Positives = 460/600 (76%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGTF + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTFSERTQVGERVMDSNDQEKERGITILAKNTAINWNGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA+ S AR G+M PL+E
Sbjct: 130 KIDRPGARPDWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYASLESSARAGDMNPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + + P Q++I L+Y+SY+G IGIGRI G++ + V +++ +K N
Sbjct: 190 AIMQHVQPPQVDLHGPFQMRISQLDYNSYVGLIGIGRIQRGKVSTNMPVTVIDRMGNKHN 249
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ F GL+R V EA +GDIV I+GIE + I T+ DP+ P+ LP L++DEPT+
Sbjct: 250 -GKVLQVLGFLGLERHEVEEAQAGDIVAISGIESLSISDTLTDPTSPDALPALSVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG++ GKF+T+RQI+ RL E +N+ LRV ++ D ++VSGRG
Sbjct: 309 SMTFQVNNSPFAGQKEYSGGKFLTSRQIRERLARETLHNVALRV-EDTEDPDRFKVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIE MRREGYEL VSRP VI K ++G L EPYE L VD+EE +QG ++++L R
Sbjct: 368 ELHLSVLIETMRREGYELGVSRPEVIIKEIDGILQEPYEQLVVDVEEEHQGGVIERLGTR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
L N+E++ K RVRL+Y IP+RGLIGFQ EF T+T G+GL+ H+F+ Y P K+
Sbjct: 428 KAQLSNMELDGKGRVRLDYIIPARGLIGFQTEFKTITSGSGLLFHIFDHYGP---KADGP 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+IS GKA Y+L LQ+RGRL I+ + +YEGM++GIHS+DNDL VN ++
Sbjct: 485 IAKRINGVMISNGHGKAPGYALMGLQERGRLLIDAGEDIYEGMLVGIHSKDNDLTVNALR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
EKQLTNIR++G D+AI L PIK++LE A+EFI DDELVE+TPK IRLRK++L EN+RK+
Sbjct: 545 EKQLTNIRAAGKDDAISLTPPIKMSLEQALEFIEDDELVEVTPKAIRLRKKYLSENDRKR 604
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + FSE + + + N + N
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTFSERTQVGERVMDSNDQEKERGITILAKNTAINWNG 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 129 NKIDRPG-----ARPDWVVEQV 145
>gi|113968650|ref|YP_732443.1| GTP-binding protein TypA [Shewanella sp. MR-4]
gi|114049205|ref|YP_739755.1| GTP-binding protein TypA [Shewanella sp. MR-7]
gi|113883334|gb|ABI37386.1| GTP-binding protein TypA [Shewanella sp. MR-4]
gi|113890647|gb|ABI44698.1| GTP-binding protein TypA [Shewanella sp. MR-7]
Length = 603
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDEVSADMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ P Q+QI L+Y+SY+G IG+GRI G IK+ Q V ++ G D K
Sbjct: 189 TIVEKVSPPAADAEGPFQMQISQLDYNSYVGVIGVGRIKRGSIKANQQVSVI-GADGKVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V+ A +GDIV ITG+ E+ I T+C LP L++DEPTL
Sbjct: 248 NGKMGQVLGYMGLDRTEVDVANAGDIVAITGLGELKISDTVCAAGSVEALPALSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR-FAVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL EPYE L VD+EE +QG +++KL R ++
Sbjct: 367 SILIENMRREGYELAVSRPEVILKTIDGELCEPYETLTVDVEEEHQGTVIEKLGIRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 427 KDMQLDGKGRVRVDFIIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG ++GIHSR NDL VN +K KQL
Sbjct: 484 ANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHSRSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TPK+IR+RK+ L EN+RK+
Sbjct: 544 TNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|431930506|ref|YP_007243552.1| GTP-binding protein TypA/BipA [Thioflavicoccus mobilis 8321]
gi|431828809|gb|AGA89922.1| GTP-binding protein TypA/BipA [Thioflavicoccus mobilis 8321]
Length = 603
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/596 (58%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN++E+ERGITI SKN ++ +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGERFGPVERVMDSNDLERERGITILSKNTALRWRDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT KA G +PIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTSKAFAHGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WVVD FDLFD+L A++EQLDFPV+Y SAL+GYA + R G+M PLFE
Sbjct: 129 KIDRPGARPSWVVDQVFDLFDRLGASDEQLDFPVVYASALNGYAGLDDDVRAGDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ + P + + P Q+Q+ +L+Y+S++G I IGRI G ++ Q +V++ D +
Sbjct: 189 AIVTHCPPPDVDPHGPFQMQVSTLDYNSFVGAIAIGRIRRGTVRPNQPIVVVKR-DGERQ 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+AK+ + + GL+R EA +GDIV +TGI+ + T+C P + LP L+IDEPT+
Sbjct: 248 RAKVGLVYGYLGLERFEETEAEAGDIVALTGIDAPNVSDTLCHPDQVEALPSLSIDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AGR+GK++T+RQ+K+RL+ E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 SMTFQVNASPFAGRQGKYLTSRQLKDRLERELIHNVALRVEEGP-DPEKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREGYEL+VSRP VIF+ ++GEL EPYE L VD+EE +QG IMQ L R G+L
Sbjct: 367 SILLENMRREGYELAVSRPEVIFREVDGELCEPYEQLTVDVEESSQGAIMQALGERRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + + RVRL+Y IPSRGLIGFQ EF+TLT GTGL HVF+ Y P ++ + R
Sbjct: 427 KNMIPDGRGRVRLDYDIPSRGLIGFQTEFMTLTSGTGLKYHVFDRYGP---ANRGGIAPR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNGVLIS +GKA+ Y+L+ LQ+RGR+ I D VYEG ++GIHSRDNDL VNP+K KQL
Sbjct: 484 RNGVLISNATGKALGYALFNLQERGRMLIAPGDEVYEGQVVGIHSRDNDLTVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L P++ TLE A+EFI DDELVEITP IR+RKR+LKE+ERK+
Sbjct: 544 TNIRAAGSDENILLTPPVRFTLEQALEFIEDDELVEITPAAIRIRKRWLKEHERKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGERFGPVERVMDSNDLERERGITILSKNTALRWRD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR + A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTSKAFAHGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|254369152|ref|ZP_04985164.1| hypothetical protein FTAG_00090 [Francisella tularensis subsp.
holarctica FSC022]
gi|157122102|gb|EDO66242.1| hypothetical protein FTAG_00090 [Francisella tularensis subsp.
holarctica FSC022]
Length = 605
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/596 (58%), Positives = 459/596 (77%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWNYY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WVVD FDLFD+L AT+EQLDFPVIY SA+ G+A + ++ +M LF+
Sbjct: 129 KIDRDGARPGWVVDQVFDLFDRLGATDEQLDFPVIYASAIDGWATNDINQKKDDMTDLFK 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + N P Q+QI SL+YS++ G IGIGRI G+IK+ V I+N +K
Sbjct: 189 AIVENVEHPNVDENGPFQMQISSLDYSNFTGTIGIGRIQRGKIKTNTPVTIVNVAGEK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI + GL+R V EA +GDIV +TG+E + I T+C+P LP L++DEPT+
Sbjct: 248 SGRVLQILGYLGLERNEVAEASAGDIVCVTGMEGLKISDTLCNPEHVEALPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQIK RL+ E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQIKERLEKELIHNVALRVEQLDDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+E++VSRP+VIFK ++GE +EPYE +DI+E +QG +M+K+ R G+L
Sbjct: 367 SILLENMRREGFEIAVSRPQVIFKDIDGEKHEPYEQAIIDIDEEHQGTVMEKMGLRQGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+E + K RV+LE+ IPSRGLIGF EF+T+T G+G+++ VF+ Y K +L R
Sbjct: 427 KNMEPDGKGRVKLEFIIPSRGLIGFYTEFLTITSGSGILNKVFDHYGLM---KKQNLETR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG L+S GKA+A++L+ LQ+RGR+FI H VYEGMIIGIH+RDNDL+VNP K KQL
Sbjct: 484 QNGTLVSMVLGKALAFALFNLQERGRMFIGHGTDVYEGMIIGIHNRDNDLVVNPCKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SG DEA+ L+ PIK+TLEYA+EFI DDELVEITPK+IRLRK++L E++RKK
Sbjct: 544 TNIRASGKDEAVVLVPPIKLTLEYALEFIEDDELVEITPKSIRLRKKYLTESDRKK 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLKSRGPEVERVMDSNDIEKERGITILAKNTALKWNY 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTEKAFAKGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|91788291|ref|YP_549243.1| translation initiation factor IF-2 [Polaromonas sp. JS666]
gi|122967793|sp|Q12AU7.1|IF2_POLSJ RecName: Full=Translation initiation factor IF-2
gi|91697516|gb|ABE44345.1| bacterial translation initiation factor 2 (bIF-2) [Polaromonas sp.
JS666]
Length = 968
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/539 (64%), Positives = 446/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVKSS VIK+LMKLGQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F ++
Sbjct: 403 MSVKSSEVIKHLMKLGQMVTINQPLDQDTAMIVVEEMGHKAITAALDDPEAFTDDDVQGQ 462
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G I+F
Sbjct: 463 -QAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGMISF 521
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VAINKIDK
Sbjct: 522 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINKIDK 581
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N+DR+K +L++E+VIPEE+GG SPF+ +SA+TG G++ LLE + LQAE+LEL+APV
Sbjct: 582 ADANMDRVKGELVTEEVIPEEFGGESPFVGVSARTGEGVDTLLEQVLLQAEVLELRAPVE 641
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVLIQSGTL+ D+V+AG++YGR+R+ML+ENGK I AGP
Sbjct: 642 ALAKGLVIEAQLDKGRGPVATVLIQSGTLKTGDVVLAGSTYGRVRAMLDENGKPIKTAGP 701
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF+DI+
Sbjct: 702 SIPVEIQGLTEVPQAGDEFMVMTDERRAREIATYRAGKFRNTKLAKQQASKLENMFSDIS 761
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L IIIK DV GS+E L +SL LSTD+VK+Q++++ VG I+ESD+NLAIASKA+
Sbjct: 762 AGEVKMLPIIIKADVQGSQEALAQSLLKLSTDEVKVQLVYSGVGGISESDVNLAIASKAV 821
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN RADA RK A+ N I+IRY+NIIY+ + E+K+ ++ ++ +KKE ++G AEIRQ
Sbjct: 822 LIGFNTRADAQARKQAENNGIDIRYYNIIYDAVDELKAAMSGMLTPDKKEEVIGTAEIRQ 881
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V+K+ IAGC + G++RR +++R+LR+ +I+TGELDSLKRFKD+VKEVK FEC
Sbjct: 882 VFKVSKIGSIAGCMVTAGIVRRTARLRLLRDNVVIFTGELDSLKRFKDDVKEVKESFEC 940
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+
Sbjct: 475 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGM--------------- 518
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I+ +DTPGH F R D V+L++ A +G MPQT+ + A G +V +NK
Sbjct: 519 ISFLDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINK 578
Query: 1047 IDRSNA 1052
ID+++A
Sbjct: 579 IDKADA 584
>gi|71276530|ref|ZP_00652805.1| Small GTP-binding protein domain:GTP-binding protein TypA [Xylella
fastidiosa Dixon]
gi|170729754|ref|YP_001775187.1| GTP-binding elongation factor protein [Xylella fastidiosa M12]
gi|71162707|gb|EAO12434.1| Small GTP-binding protein domain:GTP-binding protein TypA [Xylella
fastidiosa Dixon]
gi|71729499|gb|EAO31608.1| Small GTP-binding protein domain:GTP-binding protein TypA [Xylella
fastidiosa Ann-1]
gi|167964547|gb|ACA11557.1| GTP-binding elongation factor protein [Xylella fastidiosa M12]
Length = 609
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/600 (57%), Positives = 460/600 (76%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGTF + + R+MDSN+ EKERGITI +KN +I++NG
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTFSERAQVGERVMDSNDQEKERGITILAKNTAIKWNGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ +DLFD L AT EQ+DFP++Y SAL+GYA+ S AR G+M PL+E
Sbjct: 130 KIDRPGARPDWVVEQVWDLFDCLGATPEQMDFPIVYASALNGYASLESSARAGDMNPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + + P Q++I L+Y+SY+G IGIGRI G++ + V +++ +K N
Sbjct: 190 AIMQHVQPPQVDLHGPFQMRISQLDYNSYVGLIGIGRIQRGKVSTNMPVTVIDRIGNKHN 249
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ F GL+R V EA +GDIV I+GIE + I T+ DP+ P+ LP L++DEPT+
Sbjct: 250 -GKVLQVLGFLGLERHEVEEAQAGDIVAISGIESLSISDTLTDPTAPDALPALSVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG++ GKF+T+RQI+ RL E +N+ LRV ++ D ++VSGRG
Sbjct: 309 SMTFQVNNSPFAGQKEYSGGKFLTSRQIRERLARETLHNVALRV-EDTEDPDRFKVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIE MRREGYEL VSRP VI K ++G L EPYE L VD+EE +QG ++++L R
Sbjct: 368 ELHLSVLIETMRREGYELGVSRPEVIIKEIDGILQEPYEQLVVDVEEEHQGGVIERLGTR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
L N+E++ K RVRL+Y IP+RGLIGFQ EF T+T G+GL+ H+F+ Y P K+
Sbjct: 428 KAQLSNMELDGKGRVRLDYIIPARGLIGFQTEFKTITSGSGLLFHIFDHYGP---KADGP 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+IS GKA Y+L LQ+RGRL I+ + +YEGM++GIHS+DNDL VN ++
Sbjct: 485 IAKRINGVMISNGHGKAPGYALMGLQERGRLLIDAGEDIYEGMLVGIHSKDNDLTVNALR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
EKQLTNIR+SG D+AI L PIK++LE A+EFI DDELVE+TPK IRLRK++L EN+RK+
Sbjct: 545 EKQLTNIRASGKDDAISLTPPIKMSLEQALEFIEDDELVEVTPKAIRLRKKYLSENDRKR 604
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + FSE + + + N + N
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTFSERAQVGERVMDSNDQEKERGITILAKNTAIKWNG 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 129 NKIDRPG-----ARPDWVVEQV 145
>gi|398803484|ref|ZP_10562545.1| translation initiation factor IF-2 [Polaromonas sp. CF318]
gi|398096499|gb|EJL86822.1| translation initiation factor IF-2 [Polaromonas sp. CF318]
Length = 966
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/539 (64%), Positives = 446/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVKSS VIK+LMKLGQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F ++
Sbjct: 401 MSVKSSEVIKHLMKLGQMVTINQPLDQDTAMIVVEEMGHKAVTAALDDPEAFTDDDVQGQ 460
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ++F
Sbjct: 461 -QAELLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGMVSF 519
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VAINKIDK
Sbjct: 520 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINKIDK 579
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D NLDR+K +L++E+V+PEE+GG SPF+ +SA+TG GI++LLE + LQAE+LEL+APV
Sbjct: 580 PDANLDRVKGELVTEEVVPEEFGGDSPFVPVSARTGAGIDQLLEQVLLQAEVLELRAPVD 639
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVLIQSGTL+ D+V+AG++YGR+R+ML+ENGK I AGP
Sbjct: 640 ALAKGLVIEAQLDKGRGPVATVLIQSGTLKAGDVVLAGSTYGRVRAMLDENGKPIKSAGP 699
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF+DI+
Sbjct: 700 SIPVEIQGLTDVPQAGDEFMVMTDERRAREIATYRAGKFRNTKLAKQQAAKLENMFSDIS 759
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L IIIK DV GS+E L +SL LSTD+VK+Q++++ VG I+ESD+NLAIASKA+
Sbjct: 760 AGEVKMLPIIIKADVQGSQEALAQSLLKLSTDEVKVQLVYSGVGGISESDVNLAIASKAV 819
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN RADA RK A+ N I+IRY+NIIY+ + E+K+ ++ ++ +KKE ++G AEIRQ
Sbjct: 820 LIGFNTRADAQARKQAENNGIDIRYYNIIYDAVDELKAAMSGMLTPDKKEEVIGNAEIRQ 879
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V V+K+ IAGC + G++RR +++R+LR+ +I+TGELDSLKRFKD+V+EVK GFEC
Sbjct: 880 VFKVSKIGSIAGCMVTAGVVRRTARLRLLRDNVVIFTGELDSLKRFKDDVREVKEGFEC 938
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 30/167 (17%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 473 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGMVSF------------ 519
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A G +V +NK
Sbjct: 520 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINK 576
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQL------DFPVIYTSALHG 1087
ID+ DA D TEE + D P + SA G
Sbjct: 577 IDKP--------DANLDRVKGELVTEEVVPEEFGGDSPFVPVSARTG 615
>gi|145589409|ref|YP_001156006.1| translation initiation factor IF-2 [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|189028341|sp|A4SY78.1|IF2_POLSQ RecName: Full=Translation initiation factor IF-2
gi|145047815|gb|ABP34442.1| bacterial translation initiation factor 2 (bIF-2) [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 920
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/541 (63%), Positives = 433/541 (80%), Gaps = 5/541 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VKS+ VIK LM +GQMVTINQVLDQ+TAMI+VEEMGH AHA+KL+DP+ L+
Sbjct: 355 MAVKSAEVIKLLMGMGQMVTINQVLDQDTAMIIVEEMGHTAHAAKLDDPD---LDLGTDG 411
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD IR V EAGGITQHIGAY+V T G ITF
Sbjct: 412 HDAELLPRPPVVTVMGHVDHGKTSLLDKIRAAKVATGEAGGITQHIGAYHVETPRGMITF 471
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI HA GVP++VAINKIDK
Sbjct: 472 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHALAGGVPIVVAINKIDK 531
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+K +L++EQV+PEEYGG PFI +SAKTG GI+ LLEN+ LQAEILELKA
Sbjct: 532 PEANSERVKTELVAEQVVPEEYGGDVPFIPVSAKTGEGIDALLENVLLQAEILELKAAKD 591
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G++IE+RLDKGKGPVAT+L+QSGTL+ D+++AG++YGR+R+ML+ENGK EAGP
Sbjct: 592 APAQGLVIEARLDKGKGPVATILVQSGTLKRGDMLLAGSTYGRVRAMLDENGKPCNEAGP 651
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL VP +GE + V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E M ++
Sbjct: 652 SIPVEIQGLGDVPAAGESVQVVPDERKAREIALFRQGKFRDVKLAKQQAFKLETMMENME 711
Query: 361 KEKV--KNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASK 418
+ V K L +IIK DV GS+E L +SL LST +VK+Q++H VG I E+D+NLA+ASK
Sbjct: 712 EGAVEAKLLPVIIKADVQGSQEALAQSLMKLSTPEVKVQIVHAGVGGITETDVNLAVASK 771
Query: 419 AIIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEI 478
A+I GFN RADA+ RKLA+ N ++IRYHNIIY+ + E+K ++ ++ +KKE + GL EI
Sbjct: 772 AVIFGFNSRADAAARKLAENNGVDIRYHNIIYDAVDEVKLALSGMLTPDKKEEITGLVEI 831
Query: 479 RQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFE 538
RQV LV+KV IAGC +++G+++R S +R+LR+ +IWTGELDSLKRFKD+ KEV+AG E
Sbjct: 832 RQVFLVSKVGAIAGCLVVDGIVKRTSSVRLLRDNVVIWTGELDSLKRFKDDAKEVRAGVE 891
Query: 539 C 539
C
Sbjct: 892 C 892
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D + + I I + +E RG+ F
Sbjct: 425 VMGHVDHGKTSLLDKIRAAKVATGEAGGITQHI-GAYHVETPRGMITF------------ 471
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ AL G +V +NK
Sbjct: 472 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHALAGGVPIVVAINK 528
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A E V T + +++ E D P I SA G
Sbjct: 529 IDKPEANSERV--KTELVAEQVVPEEYGGDVPFIPVSAKTG 567
>gi|9106187|gb|AAF84023.1|AE003955_4 GTP-binding elongation factor protein [Xylella fastidiosa 9a5c]
Length = 646
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/600 (57%), Positives = 460/600 (76%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGTF + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 47 AIVAHVDHGKTTLVDQLLKQSGTFSERTQVGERVMDSNDQEKERGITILAKNTAINWNGN 106
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 107 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 166
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA+ S AR G+M PL+E
Sbjct: 167 KIDRPGARPDWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYASLESSARAGDMNPLYE 226
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + + P Q++I L+Y+SY+G IGIGRI G++ + V +++ +K N
Sbjct: 227 AIMQHVQPPQVDLHGPFQMRISQLDYNSYVGLIGIGRIQRGKVSTNMPVTVIDRMGNKHN 286
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ F GL+R V EA +GDIV I+GIE + I T+ DP+ P+ LP L++DEPT+
Sbjct: 287 -GKVLQVLGFLGLERHEVEEAQAGDIVAISGIESLSISDTLTDPTSPDALPALSVDEPTI 345
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG++ GKF+T+RQI+ RL E +N+ LRV ++ D ++VSGRG
Sbjct: 346 SMTFQVNNSPFAGQKEYSGGKFLTSRQIRERLARETLHNVALRV-EDTEDPDRFKVSGRG 404
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIE MRREGYEL VSRP VI K ++G L EPYE L VD+EE +QG ++++L R
Sbjct: 405 ELHLSVLIETMRREGYELGVSRPEVIIKEIDGILQEPYEQLVVDVEEEHQGGVIERLGTR 464
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
L N+E++ K RVRL+Y IP+RGLIGFQ EF T+T G+GL+ H+F+ Y P K+
Sbjct: 465 KAQLSNMELDGKGRVRLDYIIPARGLIGFQTEFKTITSGSGLLFHIFDHYGP---KADGP 521
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+IS GKA Y+L LQ+RGRL I+ + +YEGM++GIHS+DNDL VN ++
Sbjct: 522 IAKRINGVMISNGHGKAPGYALMGLQERGRLLIDAGEDIYEGMLVGIHSKDNDLTVNALR 581
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
EKQLTNIR++G D+AI L PIK++LE A+EFI DDELVE+TPK IRLRK++L EN+RK+
Sbjct: 582 EKQLTNIRAAGKDDAISLTPPIKMSLEQALEFIEDDELVEVTPKAIRLRKKYLSENDRKR 641
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + FSE + + + N + N
Sbjct: 46 IAIVAHVDHGKTTLVDQLLKQSGTFSERTQVGERVMDSNDQEKERGITILAKNTAINWNG 105
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G IV +
Sbjct: 106 NRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 165
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 166 NKIDRPG-----ARPDWVVEQV 182
>gi|334143132|ref|YP_004536288.1| GTP-binding protein TypA [Thioalkalimicrobium cyclicum ALM1]
gi|333964043|gb|AEG30809.1| GTP-binding protein TypA [Thioalkalimicrobium cyclicum ALM1]
Length = 607
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/596 (56%), Positives = 454/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + ++ R+MDSN+ EKERGITI SKN ++++NG
Sbjct: 10 AIIAHVDHGKTTLVDKLLRQSGTLDERKDQGERVMDSNDQEKERGITILSKNTAVDWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAVEGPMPQTRFVT+KAL+ G KPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTQKALQQGLKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD TFDLFD+L AT+EQ+DFP+++ S +GYA ++ R G+M P+FE
Sbjct: 130 KVDRDAARPDWVVDQTFDLFDRLGATDEQMDFPILFASGFNGYAGYDADVRSGDMNPIFE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ VP + P QLQ ISL Y +Y G IG GRI G ++S V +++ D K
Sbjct: 190 TIVEKVPAPDVDLGGPFQLQCISLAYDTYKGVIGTGRIKRGAVQSGMSVAVVD-KDGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AKI ++ FKGLDRV ++EA +GDIV +G++ + I T+CDP+ P LP L +D+PT+
Sbjct: 249 NAKIAELFGFKGLDRVNISEAHAGDIVAFSGLDPLNISDTLCDPNHPEALPALTVDQPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK +T+RQI+ RLD E+ N+ LRV ++ D + + VSGRGELHL
Sbjct: 309 SMTFQVNTSPFVGQEGKLLTSRQIRERLDKELLTNVALRV-EDTEDANKFRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL VSRP VIF+ ++GE+ EPYE L VD+ E NQG +M++L R +
Sbjct: 368 SVLIENMRREGFELGVSRPEVIFREIDGEVCEPYETLTVDVPEENQGTVMEQLGMRKAIM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + RVR+++ IPSRGLIG+++EF+T T+G GLI F Y + S +G+R
Sbjct: 428 SDMIPDGQGRVRIDFTIPSRGLIGYRSEFLTATQGNGLIFSSFSHYGAKFIGS---VGER 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLI+ +GKA+ ++L+ LQ+RGRLFI H D VYEG IIG+HSR+NDL VNP+K KQL
Sbjct: 485 TRGVLIAMSTGKALGFALFNLQERGRLFIGHGDEVYEGQIIGLHSRENDLTVNPLKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L P++ TLE A+EFI+DDELVE+TP ++R+RK++L EN+RK+
Sbjct: 545 TNMRASGTDEAIVLTPPVRFTLEQALEFIDDDELVEVTPLSVRIRKKYLTENDRKR 600
Score = 60.1 bits (144), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 21/143 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E + + N IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLRQSGTLDERKDQGERVMDSNDQEKERGITILSKNTAVDWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 69 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTQKALQQGLKPIVVV 128
Query: 176 NKIDKLDINLDRIKQDLISEQVI 198
NK+D+ D + D + +Q
Sbjct: 129 NKVDR-----DAARPDWVVDQTF 146
>gi|336313324|ref|ZP_08568266.1| GTP-binding protein TypA/BipA [Shewanella sp. HN-41]
gi|335863089|gb|EGM68257.1| GTP-binding protein TypA/BipA [Shewanella sp. HN-41]
Length = 603
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVSEDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++N P Q+QI L+Y+SY+G IG+GRI G IK+ Q V I+ G D K
Sbjct: 189 TIVEKVSFPDADANGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVTII-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V A +GDIV ITG+ E+ I T+C LP L++DEPTL
Sbjct: 248 NGKMGQVLGYMGLDRTEVEVANAGDIVAITGLGELKISDTVCAAGAVEALPPLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR-FAVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL EPYE L VD+EE +QG +++KL R ++
Sbjct: 367 SILIENMRREGYELAVSRPEVILKTIDGELCEPYETLTVDVEEEHQGTVIEKLGTRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P ++G+R
Sbjct: 427 KDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGG---EIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG ++GIH+R NDL VN +K KQL
Sbjct: 484 ANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TPK+IR+RK+ L EN+RK+
Sbjct: 544 TNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|117924843|ref|YP_865460.1| GTP-binding protein TypA [Magnetococcus marinus MC-1]
gi|117608599|gb|ABK44054.1| GTP-binding protein TypA [Magnetococcus marinus MC-1]
Length = 611
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/600 (58%), Positives = 454/600 (75%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN++EKERGITI +KN +I +NG
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTLKQRGEATERVMDSNDLEKERGITILAKNTAIYWNGY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAVEGPMPQTRFVT+KA G +PIVVVN
Sbjct: 75 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTQKAFAQGLRPIVVVN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV D TFDLFDKL AT+EQLDFP+IYTSAL G+A + NM LFE
Sbjct: 135 KIDRDGARPDWVQDQTFDLFDKLDATDEQLDFPIIYTSALRGFATLDHTQVTTNMDALFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K+V + P ++Q+ +L+Y+SY+G IGIGRI GRIKS VV+++ D
Sbjct: 195 TIIKHVSPPDVDQEGPFRMQVTALDYNSYVGIIGIGRIARGRIKSNSPVVLVDA-DGSQR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GLD+V V +A +GDI+ TGIE++ I TIC P LP+L++DEPT+
Sbjct: 254 NGRMLQLFGFLGLDKVEVPDAKAGDIIAFTGIEKLRISETICHPDAVEPLPLLSVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SPLAGREGKF+T+RQ+++RL E++ N+ LRV + D + VSGRGELHL
Sbjct: 314 SMTFQVNDSPLAGREGKFVTSRQLRDRLMRELETNVALRVEELDDPDK-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL VSRP VI K ++GE EPYE L VDI+E +QG +M+ L R G+L
Sbjct: 373 GILIENMRREGYELGVSRPEVIVKEIDGERREPYEQLTVDIDETSQGKVMEALGERKGEL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + + RVRL+Y IP+RGLIGF EF T+T GTGL+ HVF+ + P+ K +G+R
Sbjct: 433 VNMVPDGRGRVRLDYMIPARGLIGFLTEFRTMTSGTGLMYHVFDHFGPYI---KEPIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI++ G+ VA++L+ LQ+RGRLF + D YEGM+IGIHSR DL+VNP++ KQL
Sbjct: 490 INGVLIAKDLGETVAFALFNLQERGRLFSSPGDKCYEGMLIGIHSRGQDLVVNPMRAKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIR++G DE I L+ PI+ LE A+EFI+DDELVE+TPK+IRLRKRFLKE+ERK+ K
Sbjct: 550 TNIRAAGCDENINLVPPIRFNLEEALEFIDDDELVEVTPKSIRLRKRFLKEHERKRSSKK 609
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G T+ + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLKQRGEATERVMDSNDLEKERGITILAKNTAIYWNG 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVEGPMPQTRFVTQKAFAQGLRPIVVV 133
Query: 176 NKIDKLDINLDRIKQDLISEQVI 198
NKID+ D + D + +Q
Sbjct: 134 NKIDR-----DGARPDWVQDQTF 151
>gi|126172560|ref|YP_001048709.1| GTP-binding protein TypA [Shewanella baltica OS155]
gi|152998860|ref|YP_001364541.1| GTP-binding protein TypA [Shewanella baltica OS185]
gi|125995765|gb|ABN59840.1| GTP-binding protein TypA [Shewanella baltica OS155]
gi|151363478|gb|ABS06478.1| GTP-binding protein TypA [Shewanella baltica OS185]
Length = 609
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 15 AIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 135 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVASDDMTPLFQ 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI ++Y+SY+G IGIGRI G +K+ Q V I+ G D K
Sbjct: 195 TIVEKVSFPDADAEGSFQMQISQIDYNSYVGVIGIGRIKRGSVKTNQQVTII-GADGKTR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V A +GDIV ITG+ E+ I TIC +P L +DEPTL
Sbjct: 254 NGKMGQVLGYMGLDRTEVEIANAGDIVAITGLGELKISDTICAVGAVEAMPALTVDEPTL 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKYVTSRNILERLQTELVHNVALRVEETESPDR-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL EPYE L VD+EE +QG +++KL R ++
Sbjct: 373 SILIENMRREGYELAVSRPEVILKTIDGELCEPYETLTVDVEEEDQGTVIEKLGTRKAEM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 433 KDMQLDGKGRVRIDFIIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGG---DIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG ++GIH+R NDL VN +K KQL
Sbjct: 490 ANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TPKNIR+RKR L EN+RK+
Sbjct: 550 TNMRASGTDEAQVLTTPITMTLEQALEFIDDDELVEVTPKNIRVRKRHLTENDRKR 605
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 133
Query: 176 NKIDK 180
NKID+
Sbjct: 134 NKIDR 138
>gi|160873437|ref|YP_001552753.1| GTP-binding protein TypA [Shewanella baltica OS195]
gi|217971520|ref|YP_002356271.1| GTP-binding protein TypA [Shewanella baltica OS223]
gi|160858959|gb|ABX47493.1| GTP-binding protein TypA [Shewanella baltica OS195]
gi|217496655|gb|ACK44848.1| GTP-binding protein TypA [Shewanella baltica OS223]
Length = 603
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVASDDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI ++Y+SY+G IGIGRI G +K+ Q V I+ G D K
Sbjct: 189 TIVEKVSFPDADAEGSFQMQISQIDYNSYVGVIGIGRIKRGSVKTNQQVTII-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V A +GDIV ITG+ E+ I TIC +P L +DEPTL
Sbjct: 248 NGKMGQVLGYMGLDRTEVEIANAGDIVAITGLGELKISDTICAVGAVEAMPALTVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQTELVHNVALRVEETESPDR-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL EPYE L VD+EE +QG +++KL R ++
Sbjct: 367 SILIENMRREGYELAVSRPEVILKTIDGELCEPYETLTVDVEEEDQGTVIEKLGTRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 427 KDMQLDGKGRVRIDFIIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG ++GIH+R NDL VN +K KQL
Sbjct: 484 ANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TPKNIR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEAQVLTTPITMTLEQALEFIDDDELVEVTPKNIRVRKRHLTENDRKR 599
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|224825865|ref|ZP_03698969.1| translation initiation factor IF-2 [Pseudogulbenkiania ferrooxidans
2002]
gi|224602089|gb|EEG08268.1| translation initiation factor IF-2 [Pseudogulbenkiania ferrooxidans
2002]
Length = 953
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/561 (60%), Positives = 452/561 (80%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+ VIK LMK+G MVTINQVLDQETA+I+V EMGH+ A++++DP++FL N
Sbjct: 388 MAVKAVEVIKTLMKMGMMVTINQVLDQETALIVVGEMGHIGKAAQMDDPDAFLEN-VEGG 446
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 447 AEVERLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 506
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAI HAK +GVP++VA+NKIDK
Sbjct: 507 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIHHAKAAGVPIVVAVNKIDK 566
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L++++V+PE++GG + F+ +SAKTG GI+ LLE + LQAE+LEL APV
Sbjct: 567 QGANPERIRQELVAQEVVPEDWGGDAMFVEVSAKTGQGIDNLLEGVLLQAEVLELTAPVE 626
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKGVI+E+RLDKG+GPVAT+L+QSGTL+ D+V+AG ++GR+R+M++ENGK I EAGP
Sbjct: 627 SPAKGVIVEARLDKGRGPVATLLVQSGTLKKGDVVLAGTAFGRVRAMIDENGKAIDEAGP 686
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+++EKKAREI LFRQGKFRDV+L+KQ+ K ENMF +
Sbjct: 687 SIPVEILGLSDVPAAGEDAMVLIDEKKAREIALFRQGKFRDVRLAKQQAAKLENMFAQMA 746
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL IIIK DV GS E L++SL+ LSTD+V++ ++H+ VG I+ESDINLAIASKAI
Sbjct: 747 EGEVQNLSIIIKADVQGSYEALSQSLQKLSTDEVRVNILHSGVGGISESDINLAIASKAI 806
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN R+DA+ RKLA+ ++IRY++IIY+ + E+K+ ++ ++ EKKE + G EIRQ
Sbjct: 807 VIGFNTRSDAAARKLAESEGVDIRYYSIIYDAVDEVKAAMSGMLSPEKKEQITGTVEIRQ 866
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++R S +R++R+ ++ TGEL+SLKRFKD+VKEVK G+EC
Sbjct: 867 VISVSKVGNIAGCMVTDGVVKRGSMVRLIRHNVVVHTGELESLKRFKDDVKEVKQGYECG 926
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N IQ ++ AF+I
Sbjct: 927 LMLKNFNDIQEG-DQLEAFEI 946
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 460 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 506
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 507 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIHHAKAAGVPIVVAVNK 563
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 564 IDKQGANPERI 574
>gi|237807235|ref|YP_002891675.1| GTP-binding protein TypA [Tolumonas auensis DSM 9187]
gi|237499496|gb|ACQ92089.1| GTP-binding protein TypA [Tolumonas auensis DSM 9187]
Length = 608
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/596 (58%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ + RIMDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLDRSSDGQERIMDSNDLEKERGITILAKNTAIRWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD VLLL+DAV+GPMPQTRFVT+KA G +PIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDCVLLLVDAVDGPMPQTRFVTQKAFARGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLFD L AT+EQLDFP++Y SAL GYA + NM PLF+
Sbjct: 129 KVDRPGARPDWVVDQVFDLFDNLGATDEQLDFPIVYASALQGYATMDLSQPSDNMDPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V K + Q+QI L+YSSY+G IGIGRI+ G +K Q V ++ G D K
Sbjct: 189 AIVDFVEPPKADPAGEFQMQISQLDYSSYVGVIGIGRIVRGSVKPNQQVTVV-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI Q++ + GL R V EA +GDI+ ITG+ E+ I TIC S LP L++DEPT+
Sbjct: 248 TGKIGQVQGYLGLHRTEVAEAQAGDIIAITGLGELKISDTICSNSCVEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL +E+++N+ LRV + + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQNELRHNVALRVEETEDPDK-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREG+EL+VSRP VI + ++G EP E L VDIEE NQG +M+KL R +L
Sbjct: 367 GILIENMRREGFELAVSRPEVIMRVIDGVKMEPMETLTVDIEEQNQGSVMEKLGERKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + K RVRL+Y IP+RGLIGFQ EF+TLT GTGL+ H FEEY F + +G+R
Sbjct: 427 RNMVPDGKGRVRLDYMIPARGLIGFQTEFMTLTSGTGLLYHTFEEYGEFKGGA---IGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +GKA+ ++L+ LQ+RGRLFI H VYEG IIGIHSR NDL VN +K KQL
Sbjct: 484 QNGVLISNATGKALGFALFNLQERGRLFIEHATEVYEGQIIGIHSRSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L +PIK+TLE A+EFI+DDELVE+TP NIR+RK+ L E +RK+
Sbjct: 544 TNMRASGTDEAIVLTTPIKMTLEQAMEFIDDDELVEVTPLNIRVRKKLLTEMDRKR 599
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLDRSSDGQERIMDSNDLEKERGITILAKNTAIRWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDCVLLLVDAVDGPMPQTRFVTQKAFARGLRPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|332528894|ref|ZP_08404864.1| translation initiation factor IF-2 [Hylemonella gracilis ATCC
19624]
gi|332041651|gb|EGI78007.1| translation initiation factor IF-2 [Hylemonella gracilis ATCC
19624]
Length = 947
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/539 (61%), Positives = 442/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK LMKLGQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F E + +
Sbjct: 382 MAVKASEVIKVLMKLGQMVTINQPLDQDTAMIVVEEMGHKAIIAALDDPEAFTEEEASAH 441
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A++L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G I+F
Sbjct: 442 -QADALPRAPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVETPRGMISF 500
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LV AADDGVMPQT+EAI HAK +GVP++VA+ K DK
Sbjct: 501 LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAIKHAKAAGVPIVVAMTKADK 560
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N++++K +L++E+V+PE++GG SPF+++S+KTG+G+++LLE + LQAE+LELKAPV
Sbjct: 561 PEANIEKVKAELVAEEVVPEDFGGDSPFVAVSSKTGLGVDELLEQVLLQAEVLELKAPVD 620
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG +YGR+R+ML+E+G+ I AGP
Sbjct: 621 AAAKGLVIEAQLDKGRGPVATVLVQSGTLKAGDVVLAGQTYGRVRAMLDESGRKIDNAGP 680
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF+DI
Sbjct: 681 SIPVEIQGLTEVPQAGDEFMVLTDERRAREIATYRAGKFRNTKLAKQQAAKLENMFSDIA 740
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK+L II+K DV GS+E L SL LSTD+VK+Q+++ AVG I+ESDINLAIASKA+
Sbjct: 741 AGEVKSLPIIVKADVQGSQEALAASLLKLSTDEVKVQLVYAAVGGISESDINLAIASKAV 800
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN RADA RKLA+ N I+IRY+NIIY+ + E+K+ ++ ++ EKKE ++G+AEIR
Sbjct: 801 VIGFNTRADAGARKLAEGNGIDIRYYNIIYDAVDELKAAMSGMLAPEKKEEVIGMAEIRT 860
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AGC + G + R + R+LR+ +I+TGELDSLKR KD+V+EVK GFEC
Sbjct: 861 VFVASKIGTVAGCMVTSGHVTRSAHFRLLRDNVVIYTGELDSLKRMKDDVREVKEGFEC 919
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+
Sbjct: 454 VMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHI-GAYHVETPRGM--------------- 497
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I+ +DTPGH F R D V+L+ A +G MPQT+ + A G +V + K
Sbjct: 498 ISFLDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAIKHAKAAGVPIVVAMTK 557
Query: 1047 IDRSNARPEWV 1057
D+ A E V
Sbjct: 558 ADKPEANIEKV 568
>gi|117918758|ref|YP_867950.1| GTP-binding protein TypA [Shewanella sp. ANA-3]
gi|117611090|gb|ABK46544.1| GTP-binding protein TypA [Shewanella sp. ANA-3]
Length = 603
Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFPV+Y SAL+G+A + +M PLF+
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPVVYASALNGFATLDPDEVGTDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ P Q+QI L+Y+SY+G IG+GRI G IK+ Q V ++ G D K
Sbjct: 189 TIVEKVSSPAADAEGPFQMQISQLDYNSYVGVIGVGRIKRGSIKTNQQVTVI-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+R V+ A +GDIV ITG+ E+ I T+C LP L++DEPTL
Sbjct: 248 NGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEALPPLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR-FAVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL EPYE L VD+EE +QG +++KL R ++
Sbjct: 367 SILIENMRREGYELAVSRPEVILKTIDGELCEPYETLTVDVEEEHQGTVIEKLGVRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 427 KDMQLDGKGRVRVDFIIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG ++GIHSR NDL VN +K KQL
Sbjct: 484 ANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHSRSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TPK+IR+RK+ L EN+RK+
Sbjct: 544 TNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|387129408|ref|YP_006292298.1| GTP-binding protein TypA/BipA [Methylophaga sp. JAM7]
gi|386270697|gb|AFJ01611.1| GTP-binding protein TypA/BipA [Methylophaga sp. JAM7]
Length = 609
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/596 (57%), Positives = 458/596 (76%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +++ + R+MDSN++E+ERGITI SKN +I +
Sbjct: 14 AIIAHVDHGKTTLVDQLLRQSGTFSEHEELQERVMDSNDLERERGITILSKNTAIRWQDY 73
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+D+ EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 74 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDSAEGPMPQTRFVTQKALALGLKPIVVIN 133
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP WV+D TFDLF L AT+EQLDF VIY S L+G+A + R G+M PLF+
Sbjct: 134 KIDKPSARPGWVLDQTFDLFANLDATDEQLDFDVIYASGLNGFAGLDESVRSGDMTPLFQ 193
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
++ V + + P ++Q+ SL+Y+SY+G IGIGRI GR+K+ V +++ K N
Sbjct: 194 MVIDKVSAPAVDVDGPFRMQVSSLDYNSYVGVIGIGRIERGRVKTNTAVTVVDREGKKRN 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GL R V +A +GDI+ TG++ + I T+CDP+ LP L +DEPT+
Sbjct: 254 -GRVLQVMGFMGLSREEVEQAQAGDIIAFTGLDPLNISDTLCDPNAVEALPPLTVDEPTV 312
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP AG+EGKF+TTRQIK RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 313 TMTFQVNNSPFAGKEGKFVTTRQIKERLERELIHNVALRVEQLPEDPDKFRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL VSRP VI + ++G EPYE + +D+E+ +QG +M+K+ RGG+L
Sbjct: 373 SVLIENMRREGFELGVSRPEVIIREIDGVKEEPYEAVTIDVEDTHQGTVMEKMGTRGGEL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL++ IPSRGLIGF+ EF+T T+GTGLI VF+ YAP + GKR
Sbjct: 433 KDMSPDGKGRIRLDFMIPSRGLIGFRTEFLTATQGTGLIYSVFDHYAPVKPGT---FGKR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKAVA++++ LQ+RGR+FI H D VYEGMIIGIHSRDNDL+VNP+K KQL
Sbjct: 490 INGVLIANGVGKAVAFAIFNLQERGRMFIGHGDEVYEGMIIGIHSRDNDLVVNPLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSD+A+ L+ PI+++LE A+EFI DDEL+E+TPK++RLRK+ L E+ERK+
Sbjct: 550 TNVRASGSDDAVTLVPPIRMSLEQALEFIGDDELLEVTPKSLRLRKKLLLEHERKR 605
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + FSE + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDQLLRQSGTFSEHEELQERVMDSNDLERERGITILSKNTAIRWQD 72
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V + +G MPQTR A G+ IV I
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDSAEGPMPQTRFVTQKALALGLKPIVVI 132
Query: 176 NKIDK 180
NKIDK
Sbjct: 133 NKIDK 137
>gi|344340079|ref|ZP_08771006.1| GTP-binding protein TypA [Thiocapsa marina 5811]
gi|343800258|gb|EGV18205.1| GTP-binding protein TypA [Thiocapsa marina 5811]
Length = 603
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/596 (57%), Positives = 450/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN +EKERGITI SKN ++ +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGDRFGPVERVMDSNALEKERGITITSKNTALRWRDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT KA + G +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTSKAFQHGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD+L A++EQLDFP+IY SAL+GYA +S+ R+G+M PLFE
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDRLGASDEQLDFPIIYASALNGYAGLDSEVREGDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++ P + + ++P Q+QI +L+YSS++G I +GRI G ++ Q +V++ PD
Sbjct: 189 AIVEHCPAPEVDPDSPFQMQISTLDYSSFVGAIALGRIRHGSVRPNQQIVVVK-PDGGRY 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAK+ + + GL+R V A +GDIV +TGIE + T+C P LP L +DEPT+
Sbjct: 248 KAKVGIVYGYLGLERHEVPLATAGDIVALTGIEAPNVSDTLCHPDHAEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AGR+GK++T+RQ+K+RL+ E+ +N+ LRV + +D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGRDGKYLTSRQLKDRLERELIHNVALRVEEG-NDPEKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+E MRREGYEL+VSRP VIF+ ++G++ EPYE L VD+EE +QG IMQ L R G+L
Sbjct: 367 SILLETMRREGYELAVSRPEVIFREIDGQICEPYEQLTVDVEETSQGAIMQALGERRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL+Y +PSRGLIGFQ +F+++T GTGL H+F+ Y P + + R
Sbjct: 427 KDMVPDGKGRVRLDYEVPSRGLIGFQTDFMSMTSGTGLKYHIFDRYRP---ANPGGIAPR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNG LIS +GKA+ Y+L+ LQ+RGR+ ++ D VYEG ++GIHSRDNDL VNP+K KQL
Sbjct: 484 RNGALISNGTGKALGYALFSLQERGRMMVSPGDEVYEGQVVGIHSRDNDLTVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L P+K TLE A+EFI DDELVEITP IR+RKR L EN+RK+
Sbjct: 544 TNIRAAGSDENILLTPPVKFTLEQALEFIEDDELVEITPTAIRVRKRHLTENDRKR 599
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF----------- 120
+ I+ HVDHGKT+L+D + + + + G + + N + IT
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGDRFGPVERVMDSNALEKERGITITSKNTALRWRD 67
Query: 121 -----LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+DTPGH F R + D V+L+V A +G MPQTR + A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTSKAFQHGLRPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ D +
Sbjct: 128 NKIDRPGARPDWV 140
>gi|373947799|ref|ZP_09607760.1| GTP-binding protein TypA [Shewanella baltica OS183]
gi|378706677|ref|YP_005271571.1| GTP-binding protein TypA [Shewanella baltica OS678]
gi|386326353|ref|YP_006022470.1| GTP-binding protein TypA [Shewanella baltica BA175]
gi|386339335|ref|YP_006035701.1| GTP-binding protein TypA [Shewanella baltica OS117]
gi|418025112|ref|ZP_12664092.1| GTP-binding protein TypA [Shewanella baltica OS625]
gi|315265666|gb|ADT92519.1| GTP-binding protein TypA [Shewanella baltica OS678]
gi|333820498|gb|AEG13164.1| GTP-binding protein TypA [Shewanella baltica BA175]
gi|334861736|gb|AEH12207.1| GTP-binding protein TypA [Shewanella baltica OS117]
gi|353535525|gb|EHC05087.1| GTP-binding protein TypA [Shewanella baltica OS625]
gi|373884399|gb|EHQ13291.1| GTP-binding protein TypA [Shewanella baltica OS183]
Length = 634
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 40 AIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 99
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 100 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 159
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 160 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVASDDMTPLFQ 219
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI ++Y+SY+G IGIGRI G +K+ Q V I+ G D K
Sbjct: 220 TIVEKVSFPDADAEGSFQMQISQIDYNSYVGVIGIGRIKRGSVKTNQQVTII-GADGKTR 278
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V A +GDIV ITG+ E+ I TIC +P L +DEPTL
Sbjct: 279 NGKMGQVLGYMGLDRTEVEIANAGDIVAITGLGELKISDTICAVGAVEAMPALTVDEPTL 338
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 339 TMTFQVNTSPFAGKEGKYVTSRNILERLQTELVHNVALRVEETESPDR-FRVSGRGELHL 397
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL EPYE L VD+EE +QG +++KL R ++
Sbjct: 398 SILIENMRREGYELAVSRPEVILKTIDGELCEPYETLTVDVEEEDQGTVIEKLGTRKAEM 457
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 458 KDMQLDGKGRVRIDFIIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGG---DIGQR 514
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG ++GIH+R NDL VN +K KQL
Sbjct: 515 ANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQL 574
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TPKNIR+RKR L EN+RK+
Sbjct: 575 TNMRASGTDEAQVLTTPITMTLEQALEFIDDDELVEVTPKNIRVRKRHLTENDRKR 630
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 39 IAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWND 98
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 99 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 158
Query: 176 NKIDK 180
NKID+
Sbjct: 159 NKIDR 163
>gi|418532452|ref|ZP_13098355.1| translation initiation factor IF-2 [Comamonas testosteroni ATCC
11996]
gi|371450311|gb|EHN63360.1| translation initiation factor IF-2 [Comamonas testosteroni ATCC
11996]
Length = 925
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/539 (61%), Positives = 437/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F E + N
Sbjct: 360 MAIKASEVIKVLMKMGQMVTINQPLDQDTAMIVVEEMGHTAKVAALDDPEAFTAEEVS-N 418
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G ITF
Sbjct: 419 SEAEQLPRAPVVTVMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVKTPRGIITF 478
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LV AADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 479 LDTPGHEAFTAMRARGAKSTDIVILVAAADDGVMPQTKEAIKHAKAAGVPIVVAITKADK 538
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L+ E+V+PEEYGG SPF+++S+KTG GI++LLE + LQAE+LELKAPV
Sbjct: 539 PEANPDRVKQELVVEEVLPEEYGGDSPFVAVSSKTGQGIDELLEQVLLQAEVLELKAPVE 598
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+G VATVL+QSGTL+ D+V+AG +YGR+R+ML+E+GK EAGP
Sbjct: 599 AAAKGIVIEAQLDKGRGTVATVLVQSGTLKVGDVVLAGQTYGRVRAMLDEDGKQTKEAGP 658
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL +VP +G++ V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF +++
Sbjct: 659 SIPVEIQGLNEVPMAGDDFMVLSDERRAREIATYRAGKFRNTKLAKQQAAKLENMFAEMS 718
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
V+ L IIIK D+ GS+E L SL LSTD++K+Q++++ VG I+ESD+NLA+ASKAI
Sbjct: 719 AGDVQTLPIIIKADMQGSQEALAASLLKLSTDEIKVQLVYSGVGGISESDVNLALASKAI 778
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RK A+ N++++RY+NIIY+ + E+K+ ++ ++ EK+E ++G+AEIR
Sbjct: 779 IIGFNVRADAQARKTAEGNDVDVRYYNIIYDAVDEVKAAMSGMLAPEKREEIIGMAEIRT 838
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + K+ IAG YI +G + R++ R+LR+ +I+TGE++SL+R KD+VKEVK GFEC
Sbjct: 839 VFVATKIGTIAGSYITQGHVTRNAHFRLLRDNVVIYTGEIESLRRLKDDVKEVKEGFEC 897
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RGI F
Sbjct: 432 VMGHVDHGKTSLLDYIRRTKVASGEAGGITQHI-GAYHVKTPRGIITF------------ 478
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQT+ + A G +V + K
Sbjct: 479 ---LDTPGHEAFTAMRARGAKSTDIVILVAAADDGVMPQTKEAIKHAKAAGVPIVVAITK 535
Query: 1047 IDRSNARPEWV 1057
D+ A P+ V
Sbjct: 536 ADKPEANPDRV 546
>gi|333915367|ref|YP_004489099.1| translation initiation factor IF-2 [Delftia sp. Cs1-4]
gi|333745567|gb|AEF90744.1| translation initiation factor IF-2 [Delftia sp. Cs1-4]
Length = 953
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/539 (60%), Positives = 436/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S +IK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F E ++
Sbjct: 388 MSVKASELIKVLMKMGQMVTINQPLDQDTAMIVVEEMGHTAKVAALDDPEAFTAEEVSQQ 447
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A+ RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G +TF
Sbjct: 448 EAAQE-SRAPVVTVMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVTTPRGIVTF 506
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LV AADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 507 LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAIKHAKAAGVPIVVAITKADK 566
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D NLDR+KQ L++EQV+PEEYGG SPFI++S+KTG GI++LLE + LQAE+LEL APV
Sbjct: 567 PDANLDRVKQGLVAEQVVPEEYGGESPFIAVSSKTGQGIDELLEQVLLQAEVLELTAPVE 626
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG +YGR+R+ML+E+GK AGP
Sbjct: 627 AAAKGLVIEAQLDKGRGPVATVLVQSGTLKVGDVVLAGQTYGRVRAMLDEDGKQTKSAGP 686
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +G++ V+ +E++AREI +R GKFR KL++Q+ K ENMF ++
Sbjct: 687 SIPVEIQGLSDVPQAGDDFMVLQDERRAREIATYRAGKFRHTKLARQQAAKLENMFAEMG 746
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V+ L IIIK D+ GS+E L SL LSTD++++Q++++ VG I+ESD+NLA+ASKAI
Sbjct: 747 AGEVQTLPIIIKADMQGSQEALGTSLLKLSTDEIRVQLVYSGVGGISESDVNLALASKAI 806
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RK A+ N++++RY+NIIY+ ++E+K+ ++ ++ E+KE ++G+AEIR
Sbjct: 807 IIGFNVRADAQARKTAESNDVDLRYYNIIYDAVEEVKAAMSGMLAPERKEEIIGMAEIRT 866
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI +G + R++ R+LR +I+TGE++SLKR KD+VKEVK GFEC
Sbjct: 867 VFVASKIGTVAGSYITQGQVTRNAHFRLLRENVVIYTGEIESLKRLKDDVKEVKEGFEC 925
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + + RGI F
Sbjct: 460 VMGHVDHGKTSLLDYIRRTKVASGEAGGITQHI-GAYHVTTPRGIVTF------------ 506
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQT+ + A G +V + K
Sbjct: 507 ---LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAIKHAKAAGVPIVVAITK 563
Query: 1047 IDRSNA 1052
D+ +A
Sbjct: 564 ADKPDA 569
>gi|407790733|ref|ZP_11137825.1| GTP-binding protein TypA [Gallaecimonas xiamenensis 3-C-1]
gi|407203070|gb|EKE73058.1| GTP-binding protein TypA [Gallaecimonas xiamenensis 3-C-1]
Length = 612
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/602 (57%), Positives = 450/602 (74%), Gaps = 11/602 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + R+MDSN+ E+ERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLESRGEMAERVMDSNDQERERGITILAKNTAIRWTSP 68
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT+KA G KP
Sbjct: 69 AGEEYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFAQGLKP 128
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
IVV+NKID+ ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A+++ +M
Sbjct: 129 IVVINKIDKPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGWASKSDSEVGSDM 188
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
LFE +++ V + LQ+QI L+YSSY+G IGIGRI G++K Q V ++ G
Sbjct: 189 TALFETVIEKVSPPDVDLEGGLQMQISQLDYSSYVGVIGIGRIKRGKVKVGQQVTVV-GA 247
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
D K+ Q+ + GLDR EA +GDIV ITG+ E+ I T+CDP+ LP L +
Sbjct: 248 DGSKRNGKVGQVLGYMGLDRFETTEATAGDIVAITGLGELKISDTVCDPANVEALPALTV 307
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT+T+NF VN SP AG+EGKF+T+RQI +RL E+K+N+ LRV + + D+ + VSGR
Sbjct: 308 DEPTVTMNFCVNTSPFAGKEGKFVTSRQILDRLTQELKHNVALRVEETQDPDT-FRVSGR 366
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKT-LNGELYEPYENLFVDIEEINQGIIMQKLN 1339
GELHL +LIENMRREG+EL+VSRP+VI +T GE EP E L VD+EE +QG +M+ L
Sbjct: 367 GELHLGVLIENMRREGFELAVSRPQVIMRTNEAGEKEEPMETLTVDVEEQSQGSVMEALG 426
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
R +L+N++I+ K RVR+++ IP+RGLIGFQ +F+T+T GTGL+ H F+ Y PF +
Sbjct: 427 LRKAELRNMDIDGKGRVRIDFMIPARGLIGFQTDFMTMTSGTGLMYHSFDHYGPFKGGT- 485
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
+G+R NGVLIS +GKA+AY+L+ LQ+RGRLFI H VYEG +IGIHSRDNDL VN
Sbjct: 486 --IGQRNNGVLISNATGKALAYALFNLQERGRLFIGHAVEVYEGQVIGIHSRDNDLTVNC 543
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
+K KQLTN+R++G+DEA+ L PIK+TLE A+EFI+DDELVE+TP++IR+RKRFL EN+R
Sbjct: 544 LKGKQLTNMRAAGTDEALTLTPPIKMTLERAMEFIDDDELVEVTPQSIRIRKRFLTENDR 603
Query: 1520 KK 1521
K+
Sbjct: 604 KR 605
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + G + + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLESRGEMAERVMDSNDQERERGITILAKNTAIRWTS 67
Query: 122 -----------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
DTPGH F R + D V+L+V A +G MPQTR A G+
Sbjct: 68 PAGEEYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFAQGLK 127
Query: 171 LIVAINKIDK 180
IV INKIDK
Sbjct: 128 PIVVINKIDK 137
>gi|303256976|ref|ZP_07342990.1| translation initiation factor IF-2 [Burkholderiales bacterium
1_1_47]
gi|302860467|gb|EFL83544.1| translation initiation factor IF-2 [Burkholderiales bacterium
1_1_47]
Length = 908
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/540 (64%), Positives = 438/540 (81%), Gaps = 2/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+ VIK +MKLGQMVTINQ+LDQETAMI+VEEMGH A A+K DPE+FL E K
Sbjct: 342 MSVKAVEVIKQMMKLGQMVTINQMLDQETAMIVVEEMGHRAIAAKPEDPEAFLAEEEAKA 401
Query: 61 ITA-ESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
+ R P+VTIMGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G IT
Sbjct: 402 LANYPKEPRPPVVTIMGHVDHGKTSLLDYIRRTRVAAGEAGGITQHIGAYHVETPRGIIT 461
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGA+VTDIV+LVVAADDGVMPQT+EAIAHAK VPL+VAINKID
Sbjct: 462 FLDTPGHEAFTAMRARGAQVTDIVILVVAADDGVMPQTKEAIAHAKAGNVPLVVAINKID 521
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K + N DR+KQ+L++ +VIPE+YGG PF+ +SAK+G GI++LLEN+ LQAEILELKA
Sbjct: 522 KPEANPDRVKQELVANEVIPEDYGGDVPFVCVSAKSGQGIDELLENVLLQAEILELKAVK 581
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
PAKGV+IESRLD+GKG VA+VL+Q+GTL+ DIV+AGA++GR+R+M++ENGK++ AG
Sbjct: 582 EGPAKGVVIESRLDRGKGAVASVLVQAGTLKRGDIVLAGATFGRVRAMVDENGKSVQSAG 641
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PSIPVEIQGL+ VP +G+EL V+ E+KARE+ +RQGK+RDVKL++Q K +F
Sbjct: 642 PSIPVEIQGLSDVPQAGDELIVVSEERKARELANYRQGKYRDVKLARQVNDKLGGLFGQ- 700
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
N E K L ++IK+DV GS+E L +L LSTD+VK+ V+H AVG I+ESDINLAIAS A
Sbjct: 701 NPEGQKTLSLVIKSDVQGSQEALVHALTKLSTDEVKVSVVHAAVGGISESDINLAIASNA 760
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+++GFNVRADA RKLA+ N I+IRY+NIIY+ + ++K+ ++ ++ E++EN +GL EIR
Sbjct: 761 VVLGFNVRADALARKLAENNGIDIRYYNIIYDAVDDVKAAMSGMLAPERRENHVGLVEIR 820
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
QVI V KV +AGC +LEG++RR+S R+LRN IIWTGE++SL+RFKD+VKEVKAG EC
Sbjct: 821 QVIRVPKVGAVAGCMVLEGVVRRNSHARLLRNNVIIWTGEINSLRRFKDDVKEVKAGAEC 880
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+L+D++ R + I I + +E RGI F
Sbjct: 416 IMGHVDHGKTSLLDYIRRTRVAAGEAGGITQHI-GAYHVETPRGIITF------------ 462
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
+DTPGH F R + D V+L++ A +G MPQT+ A K G P+VV +N
Sbjct: 463 ---LDTPGHEAFTAMRARGAQVTDIVILVVAADDGVMPQTKEAIAHA-KAGNVPLVVAIN 518
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
KID+ A P+ V + +++ + D P + SA G
Sbjct: 519 KIDKPEANPDRVKQEL--VANEVIPEDYGGDVPFVCVSAKSG 558
>gi|160898431|ref|YP_001564013.1| translation initiation factor IF-2 [Delftia acidovorans SPH-1]
gi|160364015|gb|ABX35628.1| translation initiation factor IF-2 [Delftia acidovorans SPH-1]
Length = 953
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/539 (60%), Positives = 436/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+S +IK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F E ++
Sbjct: 388 MSVKASELIKVLMKMGQMVTINQPLDQDTAMIVVEEMGHTAKVAALDDPEAFTAEEVSQQ 447
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A+ RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G +TF
Sbjct: 448 EAAQE-SRAPVVTVMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVTTPRGIVTF 506
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LV AADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 507 LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAIKHAKAAGVPIVVAITKADK 566
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D NLDR+KQ L++EQV+PEEYGG SPFI++S+KTG GI++LLE + LQAE+LEL APV
Sbjct: 567 PDANLDRVKQGLVAEQVVPEEYGGESPFIAVSSKTGQGIDELLEQVLLQAEVLELTAPVE 626
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG +YGR+R+ML+E+GK AGP
Sbjct: 627 AAAKGLVIEAQLDKGRGPVATVLVQSGTLKVGDVVLAGQTYGRVRAMLDEDGKQTKSAGP 686
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +G++ V+ +E++AREI +R GKFR KL++Q+ K ENMF ++
Sbjct: 687 SIPVEIQGLSDVPQAGDDFMVLQDERRAREIATYRAGKFRHTKLARQQAAKLENMFAEMG 746
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V+ L IIIK D+ GS+E L SL LSTD++++Q++++ VG I+ESD+NLA+ASKAI
Sbjct: 747 AGEVQTLPIIIKADMQGSQEALGTSLLKLSTDEIRVQLVYSGVGGISESDVNLALASKAI 806
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RK A+ N++++RY+NIIY+ ++E+K+ ++ ++ E+KE ++G+AEIR
Sbjct: 807 IIGFNVRADAQARKTAESNDVDLRYYNIIYDAVEEVKAAMSGMLAPERKEEIIGMAEIRT 866
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI +G + R++ R+LR +I+TGE++SLKR KD+VKEVK GFEC
Sbjct: 867 VFVASKIGTVAGSYITQGQVTRNAHFRLLRENVVIYTGEIESLKRLKDDVKEVKEGFEC 925
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + + RGI F
Sbjct: 460 VMGHVDHGKTSLLDYIRRTKVASGEAGGITQHI-GAYHVTTPRGIVTF------------ 506
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQT+ + A G +V + K
Sbjct: 507 ---LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAIKHAKAAGVPIVVAITK 563
Query: 1047 IDRSNA 1052
D+ +A
Sbjct: 564 ADKPDA 569
>gi|334702691|ref|ZP_08518557.1| GTP-binding protein TypA [Aeromonas caviae Ae398]
Length = 603
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/596 (58%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + RIMDSN++E+ERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLDRTSEGQERIMDSNDLERERGITILAKNTAIRWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A + NM PLF+
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATLDQDVPSENMEPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V K + + Q+QI L+Y+SY+G IGIGRI GR+K+ Q V I++ + KP
Sbjct: 189 AIVDNVEAPKGDVDGAFQMQISQLDYNSYVGVIGIGRITRGRVKTNQQVTIVSA-NGKPR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL R V +A +GDI+ ITG+ E+ I TICD S LP L++DEPT+
Sbjct: 248 TGKVGQVLGYLGLSRTEVTDAQAGDIIAITGLGELKISDTICDNSAVEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 308 NMTFQVNTSPFAGKEGKFVTSRNILERLNQELVHNVALRVEETEDPDK-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI +T++GEL EP+E + VD+EE +QG +M++L R G++
Sbjct: 367 SILIENMRREGYELAVSRPEVILRTVDGELQEPFETVTVDVEEAHQGSVMEQLGLRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ IPSRGLIGFQ EF+T+T GTGL+ H F+ Y P S +G+R
Sbjct: 427 TNMTPDGKGRVRLDFIIPSRGLIGFQTEFLTMTSGTGLLYHTFDHYGPHKGGS---IGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG +IGIHSR NDL VN +K KQL
Sbjct: 484 QNGVLISNATGKALTFALFGLQDRGRLFIGHATEVYEGQVIGIHSRSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PI++TLE A+EFI++DELVEITPK IR+RK+ L E +RK+
Sbjct: 544 TNMRASGTDEAQVLTPPIRMTLEQALEFIDNDELVEITPKAIRIRKKLLTELDRKR 599
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLDRTSEGQERIMDSNDLERERGITILAKNTAIRWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|330831515|ref|YP_004394467.1| GTP-binding elongation factor family protein [Aeromonas veronii B565]
gi|406675255|ref|ZP_11082444.1| GTP-binding protein TypA/BipA [Aeromonas veronii AMC35]
gi|423203171|ref|ZP_17189749.1| GTP-binding protein typA/BipA [Aeromonas veronii AER39]
gi|423204435|ref|ZP_17190991.1| GTP-binding protein TypA/BipA [Aeromonas veronii AMC34]
gi|423211834|ref|ZP_17198367.1| GTP-binding protein TypA/BipA [Aeromonas veronii AER397]
gi|328806651|gb|AEB51850.1| GTP-binding elongation factor family protein [Aeromonas veronii B565]
gi|404612635|gb|EKB09693.1| GTP-binding protein TypA/BipA [Aeromonas veronii AER397]
gi|404613400|gb|EKB10422.1| GTP-binding protein typA/BipA [Aeromonas veronii AER39]
gi|404627300|gb|EKB24105.1| GTP-binding protein TypA/BipA [Aeromonas veronii AMC34]
gi|404627587|gb|EKB24387.1| GTP-binding protein TypA/BipA [Aeromonas veronii AMC35]
Length = 603
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ RIMDSN++E+ERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLDRSTEGQERIMDSNDLERERGITILAKNTAIRWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A + NM PLF+
Sbjct: 129 KVDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATMDQDVESENMEPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V K ++ Q+QI L+Y+SY+G IGIGRI GR+K+ Q V I+ G D K
Sbjct: 189 AIVDNVEAPKADAEGGFQMQISQLDYNSYVGVIGIGRITRGRVKTNQQVTIV-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL R V +A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NGKVGQVLGYLGLSRTEVTDAQAGDIIAITGLGELKISDTICDNGAVEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 NMTFQVNTSPFAGKEGKFVTSRNILERLNQELVHNVALRVEETDDPDK-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI +T++G L EP+E + VD+EE +QG +M++L R G++
Sbjct: 367 SILIENMRREGYELAVSRPEVILRTVDGVLQEPFETVTVDVEEAHQGSVMEQLGLRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ IPSRGLIGFQ EF+T+T GTGL+ H F+ Y P S +G+R
Sbjct: 427 TNMTPDGKGRVRLDFMIPSRGLIGFQTEFMTMTSGTGLLYHTFDHYGPHKGGS---IGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +GKA+ Y+L+ LQDRGRLFI H VYEG +IGIHSR NDL VN +K KQL
Sbjct: 484 QNGVLISNATGKALTYALFGLQDRGRLFIGHATEVYEGQVIGIHSRSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PI++TLE A+EFI++DELVE+TPKNIR+RK+ L E +RK+
Sbjct: 544 TNMRASGTDEAQVLTPPIRMTLEQALEFIDNDELVEVTPKNIRIRKKLLTELDRKR 599
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLDRSTEGQERIMDSNDLERERGITILAKNTAIRWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|330999164|ref|ZP_08322883.1| translation initiation factor IF-2 [Parasutterella
excrementihominis YIT 11859]
gi|329575364|gb|EGG56908.1| translation initiation factor IF-2 [Parasutterella
excrementihominis YIT 11859]
Length = 908
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/540 (64%), Positives = 438/540 (81%), Gaps = 2/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+ VIK +MKLGQMVTINQ+LDQETAMI+VEEMGH A A+K DPE+FL E K
Sbjct: 342 MSVKAIEVIKQMMKLGQMVTINQMLDQETAMIVVEEMGHRAIAAKPEDPEAFLAEEEAKA 401
Query: 61 ITA-ESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
+ R P+VTIMGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G IT
Sbjct: 402 LANYPKEPRPPVVTIMGHVDHGKTSLLDYIRRTRVAAGEAGGITQHIGAYHVETPRGIIT 461
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGA+VTDIV+LVVAADDGVMPQT+EAIAHAK VPL+VAINKID
Sbjct: 462 FLDTPGHEAFTAMRARGAQVTDIVILVVAADDGVMPQTKEAIAHAKAGNVPLVVAINKID 521
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K + N DR+KQ+L++ +VIPE+YGG PF+ +SAK+G GI++LLEN+ LQAEILELKA
Sbjct: 522 KPEANPDRVKQELVANEVIPEDYGGDVPFVCVSAKSGQGIDELLENVLLQAEILELKAVK 581
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
PAKGV+IESRLD+GKG VA+VL+Q+GTL+ DIV+AGA++GR+R+M++ENGK++ AG
Sbjct: 582 EGPAKGVVIESRLDRGKGAVASVLVQAGTLKRGDIVLAGATFGRVRAMVDENGKSVQSAG 641
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PSIPVEIQGL+ VP +G+EL V+ E+KARE+ +RQGK+RDVKL++Q K +F
Sbjct: 642 PSIPVEIQGLSDVPQAGDELIVVSEERKARELANYRQGKYRDVKLARQVNDKLGGLFGQ- 700
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
N E K L ++IK+DV GS+E L +L LSTD+VK+ V+H AVG I+ESDINLAIAS A
Sbjct: 701 NPEGQKTLSLVIKSDVQGSQEALVHALTKLSTDEVKVSVVHAAVGGISESDINLAIASNA 760
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+++GFNVRADA RKLA+ N I+IRY+NIIY+ + ++K+ ++ ++ E++EN +GL EIR
Sbjct: 761 VVLGFNVRADALARKLAENNGIDIRYYNIIYDAVDDVKAAMSGMLAPERRENHVGLVEIR 820
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
QVI V KV +AGC +LEG++RR+S R+LRN IIWTGE++SL+RFKD+VKEVKAG EC
Sbjct: 821 QVIRVPKVGAVAGCMVLEGVVRRNSHARLLRNNVIIWTGEINSLRRFKDDVKEVKAGAEC 880
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 18/132 (13%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+L+D++ R + I I + +E RGI F
Sbjct: 416 IMGHVDHGKTSLLDYIRRTRVAAGEAGGITQHI-GAYHVETPRGIITF------------ 462
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
+DTPGH F R + D V+L++ A +G MPQT+ A K G P+VV +N
Sbjct: 463 ---LDTPGHEAFTAMRARGAQVTDIVILVVAADDGVMPQTKEAIAHA-KAGNVPLVVAIN 518
Query: 1046 KIDRSNARPEWV 1057
KID+ A P+ V
Sbjct: 519 KIDKPEANPDRV 530
>gi|407000504|gb|EKE17779.1| hypothetical protein ACD_10C00274G0001 [uncultured bacterium]
Length = 917
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/542 (62%), Positives = 441/542 (81%), Gaps = 5/542 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFL---LNEY 57
M+VK+ VIK +MK+G MVTINQVLDQETAMI+VEEMGH A A+KL+DP++FL L
Sbjct: 350 MAVKAIEVIKAMMKMGSMVTINQVLDQETAMIVVEEMGHKALAAKLDDPDAFLEESLVGV 409
Query: 58 NKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
+K++ E RAPIVT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G
Sbjct: 410 HKDVPLEP--RAPIVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETERGM 467
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+TFLDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EA+ HA+ +GVPL+VA+NK
Sbjct: 468 VTFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAVHHAQAAGVPLVVAVNK 527
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
+DK D N++R+KQ+L++ VIPEEYGG PF+ +SAK G GI++LLE + LQAE+LELKA
Sbjct: 528 MDKPDANMERVKQELVAIGVIPEEYGGDCPFVGVSAKKGSGIDELLEQVLLQAEVLELKA 587
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILE 297
PA+G+IIE+RLDKG+G VAT+L+ SGTL+ D+V+AG GR+R+ML+ENGK I E
Sbjct: 588 QKDAPAQGLIIEARLDKGRGAVATMLVLSGTLKRGDVVLAGQVSGRVRAMLDENGKPINE 647
Query: 298 AGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFN 357
AGPSIPVEI GL+ VP +GEE V+++E+KAREI LFRQGKFRDVKL+KQ+ K ENMF
Sbjct: 648 AGPSIPVEILGLSDVPAAGEEAIVLVDERKAREIALFRQGKFRDVKLAKQQAAKLENMFE 707
Query: 358 DINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIAS 417
+ + ++K L +I+K DV GS+E L ++L LS ++V++ VIH AVG I+ESD+NLA AS
Sbjct: 708 QMKEGEIKTLPLIVKADVQGSQEALVQTLSKLSNEEVRVNVIHAAVGAISESDVNLAQAS 767
Query: 418 KAIIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAE 477
A+IIGFN RADA++RKLA+ ++IRY+N+IY+ + E+KS ++ ++ EK+E +LGL E
Sbjct: 768 GAVIIGFNTRADANSRKLAENFGVDIRYYNVIYDAVDEVKSALSGMLSPEKREQILGLVE 827
Query: 478 IRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGF 537
IRQV LV+KV IAGCY+LEG+++R++++R+LRN + W GELDSLKRFKD+ KEV++ F
Sbjct: 828 IRQVFLVSKVGAIAGCYVLEGVVKRNARVRLLRNNVVQWDGELDSLKRFKDDAKEVRSNF 887
Query: 538 EC 539
EC
Sbjct: 888 EC 889
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 96/232 (41%), Gaps = 31/232 (13%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E ERG+ F
Sbjct: 424 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETERGMVTF------------ 470
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V VNK
Sbjct: 471 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAVHHAQAAGVPLVVAVNK 527
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEA 1106
+D+ +A E V + + E D P + SA G + L E
Sbjct: 528 MDKPDANMERVKQELVAI--GVIPEEYGGDCPFVGVSAKKGSGIDE----------LLEQ 575
Query: 1107 ILKYVPV--HKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVI 1156
+L V K + P Q II G + +LSG +K DVV+
Sbjct: 576 VLLQAEVLELKAQKDAPAQGLIIEARLDKGRGAVATMLVLSGTLKR-GDVVL 626
>gi|347540634|ref|YP_004848059.1| translation initiation factor IF-2 [Pseudogulbenkiania sp. NH8B]
gi|345643812|dbj|BAK77645.1| translation initiation factor IF-2 [Pseudogulbenkiania sp. NH8B]
Length = 953
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 453/561 (80%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+ VIK LMK+G MVTINQVLDQETA+I+V EMGH+ A++++DP++FL N
Sbjct: 388 MAVKAVEVIKTLMKMGMMVTINQVLDQETALIVVGEMGHIGKAAQMDDPDAFLEN-VEGG 446
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E L R P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 447 AEVERLPRPPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGVVTF 506
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAI HAK +GVP++VA+NKIDK
Sbjct: 507 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIHHAKAAGVPIVVAVNKIDK 566
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L++++V+PE++GG + F+ +SAKTG GI+ LLE + LQAE+LEL AP+
Sbjct: 567 QGANPERIRQELVAQEVVPEDWGGDAMFVEVSAKTGQGIDNLLEGVLLQAEVLELTAPIE 626
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+PAKGVI+E+RLDKG+GPVAT+L+QSGTL+ D+V+AG ++GR+R+M++ENGK I EAGP
Sbjct: 627 SPAKGVIVEARLDKGRGPVATLLVQSGTLKKGDVVLAGTAFGRVRAMIDENGKAIDEAGP 686
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+++EKKAREI LFRQGKFRDV+L+KQ+ K ENMF +
Sbjct: 687 SIPVEILGLSDVPAAGEDAMVLIDEKKAREIALFRQGKFRDVRLAKQQAAKLENMFAQMA 746
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL IIIK DV GS E L++SL+ LSTD+V++ ++H+ VG I+ESDINLAIASKAI
Sbjct: 747 EGEVQNLSIIIKADVQGSYEALSQSLQKLSTDEVRVNILHSGVGGISESDINLAIASKAI 806
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN R+DA+ RKLA+ ++IRY++IIY+ + E+K+ ++ ++ EKKE + G EIRQ
Sbjct: 807 VIGFNTRSDAAARKLAESEGVDIRYYSIIYDAVDEVKAAMSGMLSPEKKEQITGTVEIRQ 866
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++R S +R++R+ ++ TGEL+SLKRFKD+VKEV+ G+EC
Sbjct: 867 VISVSKVGNIAGCMVTDGVVKRGSMVRLIRHNVVVHTGELESLKRFKDDVKEVRQGYECG 926
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N IQ + ++ AF+I
Sbjct: 927 LMLKNFNDIQ-EGDQLEAFEI 946
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 460 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGVVTF------------ 506
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 507 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIHHAKAAGVPIVVAVNK 563
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 564 IDKQGANPERI 574
>gi|157373434|ref|YP_001472034.1| GTP-binding protein TypA [Shewanella sediminis HAW-EB3]
gi|157315808|gb|ABV34906.1| GTP-binding protein TypA [Shewanella sediminis HAW-EB3]
Length = 607
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/596 (57%), Positives = 450/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D +L QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKMLAQSGTLETRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A+ + + +G+M PLFE
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFASLDPEVSEGDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI ++Y+SY+G IGIGRI G +K+ Q V I+ G D K
Sbjct: 189 TIVEKVSSPDADAEGDFQMQISQIDYNSYVGVIGIGRIKRGSVKTNQQVTII-GADGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V EA +GDIV ITG+ ++ I T+C P+ LP L++DEPTL
Sbjct: 248 NGKMGQVLGYMGLDRNEVAEANAGDIVAITGLGQLQISDTVCAPTTVEALPPLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL+ E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLEQELVHNVALRVEETDSPDR-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++GE+ EP+E L VD+EE +QG +++KL R GD+
Sbjct: 367 SILIENMRREGYELAVSRPEVIVKEIDGEMCEPFETLTVDVEEDHQGTVIEKLGIRKGDM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 427 RDMQLDGKGRVRIDFVIPSRGLIGFQTEFMTATSGTGLIYHSFDHYGPVKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS +GKA+ ++L+ LQ+RGRLFI H VYEG ++G+H+R NDL VN +K KQL
Sbjct: 484 ARGVLISNATGKALTFALFNLQERGRLFITHAAEVYEGQVVGLHARANDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L I++TLE A+EFI+DDELVE+TP NIR+RKR+L ENERK+
Sbjct: 544 TNMRASGTDEAQVLTPHIEMTLEQALEFIDDDELVEVTPLNIRVRKRYLTENERKR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKMLAQSGTLETRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|117620821|ref|YP_854806.1| GTP-binding protein TypA [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562228|gb|ABK39176.1| GTP-binding protein TypA [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 603
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ RIMDSN++E+ERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLDRSTEGQERIMDSNDLERERGITILAKNTAIRWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A + NM PLF+
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATMDQDVESDNMEPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V K +++ Q+QI L+Y+SY+G IGIGRI GR+K+ Q V I+ G D K
Sbjct: 189 AIVDNVEAPKADADGGFQMQISQLDYNSYVGVIGIGRITRGRVKTNQQVTIV-GADGKSR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL R V +A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 TGKVGQVLGYLGLSRTEVADAQAGDIIAITGLGELKISDTICDNGAVEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 NMTFQVNTSPFAGKEGKFVTSRNILERLNQELVHNVALRVEETDDPDK-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI +T++G L EP+E + VD+EE +QG +M++L R G++
Sbjct: 367 SILIENMRREGYELAVSRPEVILRTVDGVLQEPFETVTVDVEEAHQGSVMEQLGLRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ IPSRGLIGFQ EF+TLT GTGL+ H F+ Y P S +G+R
Sbjct: 427 TNMTPDGKGRVRLDFMIPSRGLIGFQTEFMTLTSGTGLLYHTFDHYGPHKGGS---IGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +GKA+ Y+L+ LQDRGRLFI H VYEG +IGIHSR NDL VN +K KQL
Sbjct: 484 QNGVLISNATGKALTYALFGLQDRGRLFIGHATEVYEGQVIGIHSRSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PI+++LE A+EFI++DELVE+TPK+IR+RK+ L E +RK+
Sbjct: 544 TNMRASGTDEAQVLTPPIRMSLEQALEFIDNDELVEVTPKSIRIRKKLLTEMDRKR 599
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLDRSTEGQERIMDSNDLERERGITILAKNTAIRWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|345873459|ref|ZP_08825369.1| GTP-binding protein TypA [Thiorhodococcus drewsii AZ1]
gi|343917218|gb|EGV28026.1| GTP-binding protein TypA [Thiorhodococcus drewsii AZ1]
Length = 604
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN +EKERGITI SKN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGDRFGPVERVMDSNALEKERGITILSKNTAIRWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT KA G +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTSKAFAHGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD+L AT+EQLDFP++Y SA++GYA G+M PLFE
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDRLGATDEQLDFPIVYASAINGYAGLEDSVSDGDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++ P + + + P Q+Q+ +L+Y+SY+G I +GRI G ++ Q VV++ D +
Sbjct: 189 AIVEHCPAPEVDPDAPFQMQVSTLDYNSYVGAIAVGRIRHGSVRPNQQVVVVKA-DGERQ 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAKI + + GL+R V A +GDIV +TG+E + T CDP + LP+L +DEPT+
Sbjct: 248 KAKIGLVYGYLGLERHEVPVATAGDIVALTGMEAPGVSDTFCDPEHVHALPLLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG++GK++T+RQ+K+RL+ E+ +N+ LRV + +D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKDGKYLTSRQLKDRLERELIHNVALRVEEG-NDPEKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREG+EL+VSRP VIF+ ++G++ EP+E L VD++E +QG IMQ L R +L
Sbjct: 367 SILLENMRREGFELAVSRPEVIFREIDGQICEPFEQLTVDLDESSQGAIMQALGERRAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL+Y IPSRGLIGFQ EF++LT GTGL HVF+ Y P + + R
Sbjct: 427 KDMVPDGKGRVRLDYEIPSRGLIGFQTEFMSLTSGTGLKYHVFDRYRP---ANMGGIAPR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNG LI+ +GKA+ Y+L+ LQ+RGR+ + H + VYEG ++GIHSRDNDL VNP+K KQL
Sbjct: 484 RNGALIANATGKALGYALFNLQERGRMMVAHGEEVYEGQVVGIHSRDNDLTVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L P+K TLE A+EFI DDELVEITP IR+RKR+LKE+ERK+
Sbjct: 544 TNIRAAGSDENILLTPPVKFTLEQALEFIEDDELVEITPAAIRVRKRYLKEHERKR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGDRFGPVERVMDSNALEKERGITILSKNTAIRWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR + A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTSKAFAHGLRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|146328653|ref|YP_001209269.1| GTP-binding protein TypA [Dichelobacter nodosus VCS1703A]
gi|146232123|gb|ABQ13101.1| GTP-binding protein TypA [Dichelobacter nodosus VCS1703A]
Length = 607
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/597 (57%), Positives = 454/597 (76%), Gaps = 7/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LLRQS T K I+ R+MDS ++E+ERGITI +KN +I ++
Sbjct: 13 AIVAHVDHGKTTLVDQLLRQSDTLAKRAEIHERMMDSMDLERERGITILAKNTAIRWHDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER+LSMVD+V+LL+DA +GPMPQTRFVT+KA +G +PIV++N
Sbjct: 73 QINIVDTPGHADFGGEVERVLSMVDSVILLVDATDGPMPQTRFVTQKAFNMGLRPIVLIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV++ TFDLFD+L AT+EQLDFP++Y S L+GYA +N R G+M LFE
Sbjct: 133 KIDRPEARPDWVLNETFDLFDRLGATDEQLDFPIVYASGLNGYAGDNPDIRSGDMTYLFE 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+KYV + + P Q+++ SL+YS Y G IG+GR+ G I V I+ G D
Sbjct: 193 TIVKYVKAPQVDRTKPFQMRVSSLDYSRYTGVIGVGRVERGTINKNTPVKIV-GRDGAMR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I Q+ F GL++V + +A +GDI+ TGI+ + I T+CDP+ LP L +DEPT+
Sbjct: 252 SGRILQMFRFLGLEKVEIEQAAAGDIISFTGIDPLYISDTLCDPNCVEALPSLTVDEPTM 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AGREGKF+T+RQI+ RL+ E+ +N+ LRV + D ++VSGRGELHL
Sbjct: 312 SMTFQVNTSPFAGREGKFVTSRQIQERLERELIHNVALRV-EAMADADKFKVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREGYEL VSRP VIFK ++G +EPYE + +DI+E +QG +M+++ R GDL
Sbjct: 371 SVLIETMRREGYELGVSRPEVIFKEIDGVKHEPYELVLLDIDEEHQGAVMERMGERKGDL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK- 1404
+N+ ++ K RVRLEY IP+RGLIGFQ EF+T+T GTGL F+ YAP K LGK
Sbjct: 431 QNMVVDGKGRVRLEYLIPTRGLIGFQTEFMTMTSGTGLKFQSFDHYAPV----KEGLGKT 486
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
RRNGVLI+ SGKA+AY+L+ LQ+RGRLFI H D VYEGMIIG+HSRDNDL+VNP+K KQ
Sbjct: 487 RRNGVLIANGSGKALAYALFNLQERGRLFIGHGDEVYEGMIIGMHSRDNDLVVNPLKAKQ 546
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTNIR++GSDE I L PI +LE A+EFI+DDELVE+TPK+IRLRK++L E ER++
Sbjct: 547 LTNIRAAGSDENIILTPPIHHSLEQALEFIDDDELVEVTPKSIRLRKKYLHELERRR 603
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGGITQHIGAYNVVTNHG-------------- 116
+ I+ HVDHGKT+L+D +R+++ + A + + + ++ G
Sbjct: 12 IAIVAHVDHGKTTLVDQLLRQSDTLAKRAEIHERMMDSMDLERERGITILAKNTAIRWHD 71
Query: 117 -SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YQINIVDTPGHADFGGEVERVLSMVDSVILLVDATDGPMPQTRFVTQKAFNMGLRPIVLI 131
Query: 176 NKIDKLDINLDRI 188
NKID+ + D +
Sbjct: 132 NKIDRPEARPDWV 144
>gi|212554656|gb|ACJ27110.1| Small GTP-binding protein domain:GTP-binding protein TypA [Shewanella
piezotolerans WP3]
Length = 614
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/596 (57%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D +L QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 15 AIIAHVDHGKTTLVDKMLAQSGTLESRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + NM PLFE
Sbjct: 135 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDETSDNMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI ++Y+SY+G IGIGRI G +K+ Q V ++ G D K
Sbjct: 195 TIVEKVSSPDADAEGDFQMQISQIDYNSYVGVIGIGRIKRGSVKTNQQVTVI-GADGKTR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+R V EA +GDIV ITG+ ++ I TIC P+ LP L++DEPTL
Sbjct: 254 NGKMGQVLGYMGLERHEVAEANAGDIVAITGLGQLQISDTICAPTTVEALPALSVDEPTL 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL+ E+ +N+ LRV + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKYVTSRNILERLEQELVHNVALRVEETDSPDR-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++GE+ EPYE L VD+EE +QG +++KL R GD+
Sbjct: 373 SILIENMRREGYELAVSRPEVIEKEIDGEMCEPYETLTVDVEEEHQGAVIEKLGTRKGDM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 433 RDMQLDGKGRVRIDFVIPSRGLIGFQTEFMTATSGTGLIYHSFDHYGPVKGG---DIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS +GKA+ ++L+ LQ+RGRLFI H VYEG ++G+H+R NDL VN +K KQL
Sbjct: 490 ARGVLISNATGKALTFALFNLQERGRLFITHAAEVYEGQVVGLHARANDLTVNCLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L I++TLE A+EFI+DDELVE+TP+NIR+RKR+L ENERK+
Sbjct: 550 TNMRASGTDEAQVLTPHIEMTLEQALEFIDDDELVEVTPENIRVRKRYLTENERKR 605
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + G T+ + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKMLAQSGTLESRGEATERVMDSNDLEKERGITILAKNTAIKWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 133
Query: 176 NKIDK 180
NKID+
Sbjct: 134 NKIDR 138
>gi|120597098|ref|YP_961672.1| GTP-binding protein TypA [Shewanella sp. W3-18-1]
gi|146291520|ref|YP_001181944.1| GTP-binding protein TypA [Shewanella putrefaciens CN-32]
gi|386312065|ref|YP_006008230.1| GTP-binding protein TypA [Shewanella putrefaciens 200]
gi|120557191|gb|ABM23118.1| GTP-binding protein TypA [Shewanella sp. W3-18-1]
gi|145563210|gb|ABP74145.1| GTP-binding protein TypA [Shewanella putrefaciens CN-32]
gi|319424690|gb|ADV52764.1| GTP-binding protein TypA [Shewanella putrefaciens 200]
Length = 603
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/596 (57%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVSEDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V +++ Q+QI L+Y+SY+G IG+GRI G IK+ Q V I+ G D K
Sbjct: 189 TIVEKVSFPDADADGAFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVTII-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V A +GDIV ITG+ E+ I T+C LP L++DEPTL
Sbjct: 248 NGKMGQVLGYMGLDRTEVEVANAGDIVAITGLGELKISDTVCAAGNVEALPPLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL EP+E L VD+EE +QG +++KL R ++
Sbjct: 367 SILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEHQGTVIEKLGTRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 427 KDMQLDGKGRVRIDFIIPSRGLIGFQTEFMTATSGTGLIYHSFDHYGPHKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG ++GIH+R NDL VN +K KQL
Sbjct: 484 ANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TPK+IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEAQVLTTPITMTLEQALEFIDDDELVEVTPKSIRVRKRHLTENDRKR 599
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|91794802|ref|YP_564453.1| GTP-binding protein TypA [Shewanella denitrificans OS217]
gi|91716804|gb|ABE56730.1| GTP-binding protein TypA [Shewanella denitrificans OS217]
Length = 603
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/596 (58%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLAQSGTLASRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVSEDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI ++Y+SY+G IGIGRI G +K+ Q V I+ G D K
Sbjct: 189 TIVEKVSFPDADAEGAFQMQISQIDYNSYVGVIGIGRINRGSVKTNQQVTII-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V+ A +GDIV ITG+ E+ I TIC +P L +DEPTL
Sbjct: 248 NGKMGQVLGYMGLDRHEVDIANAGDIVAITGLGELKISDTICAVGAVEAMPPLTVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQTELVHNVALRVEETESPDR-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL EP+E L VD+EE +QG +++KL R ++
Sbjct: 367 SILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEDQGSVIEKLGIRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ YAP D+G+R
Sbjct: 427 KDMQLDGKGRVRIDFIIPSRGLIGFQTEFLTATSGTGLIYHSFDHYAPHKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG ++GIH+R NDL VN +K KQL
Sbjct: 484 ANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PI ++LE A+EFI+DDELVE+TPKNIR+RKRFL ENERK+
Sbjct: 544 TNMRASGTDEAQVLTPPINMSLEQALEFIDDDELVEVTPKNIRVRKRFLTENERKR 599
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLAQSGTLASRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|264677931|ref|YP_003277838.1| translation initiation factor IF-2 [Comamonas testosteroni CNB-2]
gi|262208444|gb|ACY32542.1| translation initiation factor IF-2 [Comamonas testosteroni CNB-2]
Length = 944
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/539 (61%), Positives = 437/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F E + N
Sbjct: 379 MAIKASEVIKVLMKMGQMVTINQPLDQDTAMIVVEEMGHTAKVAALDDPEAFTAEEVS-N 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G ITF
Sbjct: 438 SEAEQLPRAPVVTVMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVKTPRGIITF 497
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LV AADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 498 LDTPGHEAFTAMRARGAKSTDIVILVAAADDGVMPQTKEAIKHAKAAGVPIVVAITKADK 557
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L+ E+V+PEEYGG SPF+++S+KTG GI++LLE + LQAE+LELKAPV
Sbjct: 558 PEANPDRVKQELVVEEVLPEEYGGDSPFVAVSSKTGQGIDELLEQVLLQAEVLELKAPVD 617
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+G VATVL+QSGTL+ D+V+AG +YGR+R+ML+E+GK EAGP
Sbjct: 618 AAAKGIVIEAQLDKGRGTVATVLVQSGTLKVGDVVLAGQTYGRVRAMLDEDGKQTKEAGP 677
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL +VP +G++ V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF +++
Sbjct: 678 SIPVEIQGLNEVPQAGDDFMVLSDERRAREIATYRAGKFRNTKLAKQQAAKLENMFAEMS 737
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
V+ L IIIK D+ GS+E L SL LSTD++K+Q++++ VG I+ESD+NLA+ASKAI
Sbjct: 738 AGDVQTLPIIIKADMQGSQEALAASLLKLSTDEIKVQLVYSGVGGISESDVNLALASKAI 797
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RK A+ N++++RY+NIIY+ + E+K+ ++ ++ EK+E ++G+AEIR
Sbjct: 798 IIGFNVRADAQARKTAEGNDVDVRYYNIIYDAVDEVKAAMSGMLAPEKREEIIGMAEIRT 857
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + K+ IAG YI +G + R++ R+LR+ +I+TGE++SL+R KD+VKEVK GFEC
Sbjct: 858 VFVATKIGTIAGSYITQGHVTRNAHFRLLRDNVVIYTGEIESLRRMKDDVKEVKEGFEC 916
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RGI F
Sbjct: 451 VMGHVDHGKTSLLDYIRRTKVASGEAGGITQHI-GAYHVKTPRGIITF------------ 497
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQT+ + A G +V + K
Sbjct: 498 ---LDTPGHEAFTAMRARGAKSTDIVILVAAADDGVMPQTKEAIKHAKAAGVPIVVAITK 554
Query: 1047 IDRSNARPEWV 1057
D+ A P+ V
Sbjct: 555 ADKPEANPDRV 565
>gi|302878489|ref|YP_003847053.1| translation initiation factor IF-2 [Gallionella capsiferriformans
ES-2]
gi|302581278|gb|ADL55289.1| translation initiation factor IF-2 [Gallionella capsiferriformans
ES-2]
Length = 884
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/540 (61%), Positives = 448/540 (82%), Gaps = 3/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLN-EYNK 59
+SVK+ VIK LMK+G MVTINQVLDQETAMI+VEE+GHVA A+KL+DP+++L++ E +
Sbjct: 319 LSVKAVEVIKVLMKMGMMVTINQVLDQETAMIVVEELGHVAKAAKLDDPDAYLMDDEVHH 378
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
++ ESL RAP+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ++
Sbjct: 379 DV--ESLPRAPVVTVMGHVDHGKTSLLDYIRRTRVVSGEAGGITQHIGAYHVETPRGMVS 436
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAIAHAK VP++VAI K+D
Sbjct: 437 FLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAGSVPIVVAITKVD 496
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K D N++R+KQ+L++E V+PE++GG + F+ +S+K+G+GI++LLE+I LQAE++ELKAP
Sbjct: 497 KTDANIERVKQELVAEGVVPEDWGGDTMFVEVSSKSGLGIDQLLESILLQAELMELKAPR 556
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
AKG++IE+RLDKGKGPVATVLIQSGT++ D V+ G+ +GR+R+ML+ENGK+I EAG
Sbjct: 557 DCNAKGLVIEARLDKGKGPVATVLIQSGTMKRGDAVLIGSVFGRVRAMLDENGKSIAEAG 616
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PSIPVEIQGL++VP +GE L V+ +EK+AREI LFRQGK+R VKL++Q+ K ENMF +
Sbjct: 617 PSIPVEIQGLSEVPDAGESLMVLTDEKRAREIALFRQGKYRGVKLAQQQAAKLENMFEQM 676
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
+ +V+ L +I+K+DV GS E + ++L+ LSTD+VK+ +IH+ VG+INESDINLA+ASKA
Sbjct: 677 AEGEVRTLSLIVKSDVQGSAEAIAQTLQKLSTDEVKVNLIHSGVGSINESDINLALASKA 736
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
I+IGFN R DA RKLA+ + IR ++IIY + +IK+ ++ ++ EK+E++LG+ E+R
Sbjct: 737 ILIGFNTRTDAPARKLAESCGVQIRNYSIIYAMADDIKTALSGMLAPEKRESILGMVEVR 796
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
QV +V+K+ IAGC +LEG+++R ++R++R +I GELDSLKRFKD+ KEV+A FEC
Sbjct: 797 QVFVVSKIGTIAGCMVLEGVVKRGCRVRVMRGNEMIHEGELDSLKRFKDDAKEVRANFEC 856
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 25/155 (16%)
Query: 911 NLFLSDENIYILIKS-------AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSN 963
+ +L D+ ++ ++S ++ HVDHGKT+L+D++ R + I I +
Sbjct: 368 DAYLMDDEVHHDVESLPRAPVVTVMGHVDHGKTSLLDYIRRTRVVSGEAGGITQHI-GAY 426
Query: 964 EIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPM 1023
+E RG+ F +DTPGH F R D V+L++ A +G M
Sbjct: 427 HVETPRGMVSF---------------LDTPGHEAFTAMRARGAKATDIVILVVAADDGVM 471
Query: 1024 PQTRFVTRKALKLGFKPIVV-VNKIDRSNARPEWV 1057
PQT+ A K G PIVV + K+D+++A E V
Sbjct: 472 PQTKEAIAHA-KAGSVPIVVAITKVDKTDANIERV 505
>gi|299530198|ref|ZP_07043624.1| translation initiation factor IF-2 [Comamonas testosteroni S44]
gi|298721855|gb|EFI62786.1| translation initiation factor IF-2 [Comamonas testosteroni S44]
Length = 925
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/539 (61%), Positives = 437/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F E + N
Sbjct: 360 MAIKASEVIKVLMKMGQMVTINQPLDQDTAMIVVEEMGHTAKVAALDDPEAFTAEEVS-N 418
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G ITF
Sbjct: 419 SEAEQLPRAPVVTVMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVKTPRGIITF 478
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LV AADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 479 LDTPGHEAFTAMRARGAKSTDIVILVAAADDGVMPQTKEAIKHAKAAGVPIVVAITKADK 538
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L+ E+V+PEEYGG SPF+++S+KTG GI++LLE + LQAE+LELKAPV
Sbjct: 539 PEANPDRVKQELVVEEVLPEEYGGDSPFVAVSSKTGQGIDELLEQVLLQAEVLELKAPVD 598
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+G VATVL+QSGTL+ D+V+AG +YGR+R+ML+E+GK EAGP
Sbjct: 599 AAAKGIVIEAQLDKGRGTVATVLVQSGTLKVGDVVLAGQTYGRVRAMLDEDGKQTKEAGP 658
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL +VP +G++ V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF +++
Sbjct: 659 SIPVEIQGLNEVPQAGDDFMVLSDERRAREIATYRAGKFRNTKLAKQQAAKLENMFAEMS 718
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
V+ L IIIK D+ GS+E L SL LSTD++K+Q++++ VG I+ESD+NLA+ASKAI
Sbjct: 719 AGDVQTLPIIIKADMQGSQEALAASLLKLSTDEIKVQLVYSGVGGISESDVNLALASKAI 778
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RK A+ N++++RY+NIIY+ + E+K+ ++ ++ EK+E ++G+AEIR
Sbjct: 779 IIGFNVRADAQARKTAEGNDVDVRYYNIIYDAVDEVKAAMSGMLAPEKREEIIGMAEIRT 838
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + K+ IAG YI +G + R++ R+LR+ +I+TGE++SL+R KD+VKEVK GFEC
Sbjct: 839 VFVATKIGTIAGSYITQGHVTRNAHFRLLRDNVVIYTGEIESLRRMKDDVKEVKEGFEC 897
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RGI F
Sbjct: 432 VMGHVDHGKTSLLDYIRRTKVASGEAGGITQHI-GAYHVKTPRGIITF------------ 478
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQT+ + A G +V + K
Sbjct: 479 ---LDTPGHEAFTAMRARGAKSTDIVILVAAADDGVMPQTKEAIKHAKAAGVPIVVAITK 535
Query: 1047 IDRSNARPEWV 1057
D+ A P+ V
Sbjct: 536 ADKPEANPDRV 546
>gi|170728961|ref|YP_001762987.1| GTP-binding protein TypA [Shewanella woodyi ATCC 51908]
gi|169814308|gb|ACA88892.1| GTP-binding protein TypA [Shewanella woodyi ATCC 51908]
Length = 603
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLAQSGTLETRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A+ + + +G+M PLFE
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFASLDPETTEGDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI L+Y+SY+G IG+GRI G +K+ Q V I++ +K N
Sbjct: 189 TIIEKVSSPDADAEGDFQMQISQLDYNSYVGVIGVGRIKRGSVKTNQQVTIIDAEGNKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+R V+EA +GDIV ITG+ ++ I T+C + LP L++DEPTL
Sbjct: 249 -GKMGQVLGYMGLERHEVSEANAGDIVAITGLGQLKISDTVCATTTVEALPPLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL+ E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLEQELVHNVALRVEETDSPDR-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++GE+ EP+E L VD++E +QG +++KL R GD+
Sbjct: 367 SILIENMRREGYELAVSRPEVIMKEIDGEMCEPFETLTVDVQEEHQGTVIEKLGTRKGDM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 427 KDMQLDGKGRVRIDFVIPSRGLIGFQTEFMTATSGTGLIYHSFDHYGPVKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS +GKA+ ++L+ LQ+RGRLFI H VYEG ++G+H+R NDL VN +K KQL
Sbjct: 484 ARGVLISNATGKALTFALFGLQERGRLFITHAAEVYEGQVVGLHARANDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L I++TLE A+EFI+DDELVE+TP+NIR+RKRFL ENERK+
Sbjct: 544 TNMRASGTDEAQVLTPHIEMTLEQALEFIDDDELVEVTPQNIRVRKRFLTENERKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLAQSGTLETRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|145300966|ref|YP_001143807.1| GTP-binding protein TypA [Aeromonas salmonicida subsp. salmonicida
A449]
gi|418362644|ref|ZP_12963270.1| GTP-binding protein TypA [Aeromonas salmonicida subsp. salmonicida
01-B526]
gi|142853738|gb|ABO92059.1| GTP-binding protein TypA [Aeromonas salmonicida subsp. salmonicida
A449]
gi|356686093|gb|EHI50704.1| GTP-binding protein TypA [Aeromonas salmonicida subsp. salmonicida
01-B526]
Length = 603
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/596 (57%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLDRTTDGQERLMDSNDLEKERGITILAKNTAIRWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A + NM PLF+
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATMDQGVESDNMEPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V K + Q+QI L+Y+SY+G IGIGRI GR+K+ Q V ++ G D K
Sbjct: 189 AIVDNVEQPKGDPAGAFQMQISQLDYNSYVGVIGIGRISRGRVKTNQQVTVI-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL R V +A +GDI+ ITG+ E+ I TICD S LP L++DEPT+
Sbjct: 248 TGKVGQVLGYLGLSRTEVVDAQAGDIIAITGLGELKISDTICDNSAVQALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 308 NMTFQVNTSPFAGKEGKFVTSRNIMERLNQELVHNVALRVEETEDPDK-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI +T++G L+EP+E + VD+EEI+QG +M++L R G++
Sbjct: 367 SILIENMRREGYELAVSRPEVILRTVDGVLHEPFETVTVDVEEIHQGSVMEQLGLRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ IPSRGLIGFQ EF+T+T GTGL+ H F+ Y P S +G+R
Sbjct: 427 TNMTPDGKGRVRLDFMIPSRGLIGFQTEFLTMTSGTGLLYHTFDHYGPHKGGS---IGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG +IGIHSR NDL VN +K KQL
Sbjct: 484 QNGVLISNATGKALTFALFGLQDRGRLFIGHATEVYEGQVIGIHSRSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PI++TLE A+EFI++DELVEITPK IR+RK+ L E +RK+
Sbjct: 544 TNMRASGTDEAQVLTPPIRMTLEQALEFIDNDELVEITPKAIRVRKKLLTEMDRKR 599
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLDRTTDGQERLMDSNDLEKERGITILAKNTAIRWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|171463767|ref|YP_001797880.1| translation initiation factor IF-2 [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|238689066|sp|B1XV89.1|IF2_POLNS RecName: Full=Translation initiation factor IF-2
gi|171193305|gb|ACB44266.1| translation initiation factor IF-2 [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 917
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/541 (63%), Positives = 434/541 (80%), Gaps = 5/541 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VKS+ VIK LM +GQMVTINQVLDQ+TAMI+VEEMGH AHA+KL+DP+ L E +
Sbjct: 352 MAVKSAEVIKLLMGMGQMVTINQVLDQDTAMIIVEEMGHKAHAAKLDDPDLDLGTEGHD- 410
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLD IR V E GGITQHIGAY+V T G ITF
Sbjct: 411 --AELLPRPPVVTVMGHVDHGKTSLLDKIRTAKVAIGEVGGITQHIGAYHVETPRGMITF 468
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI HA GVPL+VAINKIDK
Sbjct: 469 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHAIAGGVPLVVAINKIDK 528
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+K +L++EQV+ EEYGG PFI +SAKTG GI+ LLEN+ LQAEILELKAP
Sbjct: 529 PEANSERVKAELVAEQVVLEEYGGDVPFIPVSAKTGEGIDALLENVLLQAEILELKAPKE 588
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G++IE+RLDKGKGPVATVL+QSGTL+ D+++AG+S+GR+R+M++ENGK EAGP
Sbjct: 589 APAQGLVIEARLDKGKGPVATVLVQSGTLKRGDMLLAGSSFGRVRAMMDENGKPCNEAGP 648
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GE + V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENM I
Sbjct: 649 SIPVEIQGLSEVPAAGEAVQVMPDERKAREIALFRQGKFRDVKLAKQQAVKLENMMETIG 708
Query: 361 KEKV--KNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASK 418
+ + K L +IIK DV GS+E L++ L LS +VK+Q++H AVG I E+D+NLA+ SK
Sbjct: 709 EGAIEAKLLPLIIKADVQGSQEALSQLLMKLSIPEVKVQIVHAAVGGITETDVNLAVVSK 768
Query: 419 AIIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEI 478
A+IIGFN RADA+ RKLA+ N ++IRYHNIIY+ + E+K ++ ++ KKE + GL EI
Sbjct: 769 AVIIGFNSRADAAARKLAENNGVDIRYHNIIYDAVDEVKLALSGMLIPGKKEEITGLVEI 828
Query: 479 RQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFE 538
RQV LV+KV IAGC +++G+++R S +R+LR+ ++WTGELDSLKRFKD+ KEV+AG E
Sbjct: 829 RQVFLVSKVGAIAGCLVVDGIVKRTSSVRLLRDNVVVWTGELDSLKRFKDDAKEVRAGVE 888
Query: 539 C 539
C
Sbjct: 889 C 889
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D + + I I + +E RG+ F
Sbjct: 422 VMGHVDHGKTSLLDKIRTAKVAIGEVGGITQHI-GAYHVETPRGMITF------------ 468
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A+ G +V +NK
Sbjct: 469 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHAIAGGVPLVVAINK 525
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEE-QLDFPVIYTSALHG 1087
ID+ A E V +L + EE D P I SA G
Sbjct: 526 IDKPEANSERV---KAELVAEQVVLEEYGGDVPFIPVSAKTG 564
>gi|326796711|ref|YP_004314531.1| GTP-binding protein TypA [Marinomonas mediterranea MMB-1]
gi|326547475|gb|ADZ92695.1| GTP-binding protein TypA [Marinomonas mediterranea MMB-1]
Length = 606
Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/600 (57%), Positives = 449/600 (74%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + RIMDSN+ EKERGITI +KN SI++N
Sbjct: 12 AIIAHVDHGKTTLVDQLLSQSGTLDRKDEGAERIMDSNDQEKERGITILAKNTSIKWNDY 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA + G +PIVV+N
Sbjct: 72 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLRPIVVIN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L ATEEQLDFPVIY SA++G + + +A +M PL++
Sbjct: 132 KIDRPGARPDWVMDQVFDLFDSLGATEEQLDFPVIYASAINGISGNDPEAMAEDMTPLYQ 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VPV + Q+Q+ +L+Y SY+G IGIGRI G + Q VVI + DDK
Sbjct: 192 MIVDSVPVPNVDPEGTFQMQVSALDYDSYVGVIGIGRITRGSLSPNQQVVIKSS-DDKER 250
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K KI ++ + GL RV + A +GDIV ITGI+ + I T+CDP+ LP+L +DEPT+
Sbjct: 251 KGKILNVKGYHGLQRVDTDLASAGDIVCITGIDGLSISDTLCDPTCVESLPILTVDEPTV 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F+VN+SP AG+EGKF+TTR IK RLD E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 311 SMTFIVNDSPFAGKEGKFVTTRNIKERLDQELIHNVALRVEQGDTPDK-FIVSGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE+MRREG+E+ VSRP V+ K ++G++ EP+E + +D+EE +QG IM++L R +L
Sbjct: 370 SVLIESMRREGFEMGVSRPEVVQKEIDGQIQEPFEQVVIDVEEQHQGSIMEELGLRKAEL 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K RVRLE+ +PSRGLIGF+ F+TLT G+G+++ VF+ Y P + ++ R
Sbjct: 430 TNMEPDNKGRVRLEFIVPSRGLIGFRGLFLTLTSGSGIMTSVFDHYGPVKDG---EVSGR 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GK AY+L+ LQ RGRLF+ H VYEG +IGIHSRDNDL VNPIK KQL
Sbjct: 487 QNGVLVSMLTGKTAAYALFNLQSRGRLFLGHAVEVYEGQVIGIHSRDNDLAVNPIKGKQL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA+ L PIK TLE A+EFI DDELVE+TP++IR+RK+ L ENERK+ K
Sbjct: 547 TNVRASGTDEALTLTPPIKHTLEQALEFIEDDELVEVTPESIRIRKKLLTENERKRAGRK 606
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
V I+ HVDHGKT+L+D + + GIT ++ N
Sbjct: 11 VAIIAHVDHGKTTLVDQLLSQSGTLDRKDEGAERIMDSNDQEKERGITILAKNTSIKWND 70
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR + A G+ IV I
Sbjct: 71 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLRPIVVI 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|345878729|ref|ZP_08830429.1| hydrogenase, b-type cytochrome subunit, putative [endosymbiont of
Riftia pachyptila (vent Ph05)]
gi|344224240|gb|EGV50643.1| hydrogenase, b-type cytochrome subunit, putative [endosymbiont of
Riftia pachyptila (vent Ph05)]
Length = 651
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+ EKERGITI SKN +I +NG
Sbjct: 56 AIIAHVDHGKTTLVDELLKQSGTLGERFGAVERVMDSNDQEKERGITILSKNTAINWNGY 115
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT+KA G +PI+VVN
Sbjct: 116 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFDHGLRPILVVN 175
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARPEWV+D F+LFD+L A++EQLDFP++Y SA++GYA R+G+M LFE
Sbjct: 176 KIDKPGARPEWVIDQVFELFDRLGASDEQLDFPIVYASAINGYAGLEDTVREGDMSSLFE 235
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++ PV + N PLQ+QI +L+Y+SY+G I +GRI G I+ Q VV++ D + +
Sbjct: 236 AIIEHCPVPDVDPNGPLQMQISNLDYNSYVGAIAVGRITRGTIRPNQQVVVVK-YDGEVH 294
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAK+ + + GL+R V EA +GDI+ ITG+E + T+CDP LP L++DEPT+
Sbjct: 295 KAKVGIVYGYLGLERHEVKEASAGDIIAITGMEAPNVSDTLCDPENVEALPALSVDEPTV 354
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AG+EGK++T+RQ+K RL+ E+ +N+ LRV + D ++VSGRGELHL
Sbjct: 355 SMTFQVNASPFAGKEGKYLTSRQLKERLERELIHNVALRVEEGT-DPEKFKVSGRGELHL 413
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++L+ENMRREG+EL+VSRP VIF+ ++GE+ EPYE L VD+EE +QG IM+ L R G+L
Sbjct: 414 SVLLENMRREGFELAVSRPEVIFREIDGEVCEPYEQLTVDVEEQHQGAIMEALGARKGEL 473
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL+Y IPSRGLIGFQ EF+T T GTGL+ HVF+ Y + + R
Sbjct: 474 KDMVPDGKGRVRLDYVIPSRGLIGFQTEFMTSTSGTGLMYHVFDHYGEAQHGG---IAPR 530
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GK + ++L+ LQ+RG++F + D VYEG I+GIHSRDNDL+VNP+K KQL
Sbjct: 531 KNGVLISNGQGKVLGFALFNLQERGKMFASPGDQVYEGQIVGIHSRDNDLVVNPLKGKQL 590
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG D+AI L P+K +LE A+EFI DDELVE+TP +R+RK+ LKE+ERK+
Sbjct: 591 TNVRASGKDDAIMLTPPLKFSLEQALEFIEDDELVELTPSAVRIRKKHLKEHERKR 646
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + E G + + N IT L
Sbjct: 55 IAIIAHVDHGKTTLVDELLKQSGTLGERFGAVERVMDSNDQEKERGITILSKNTAINWNG 114
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ I+ +
Sbjct: 115 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFDHGLRPILVV 174
Query: 176 NKIDK 180
NKIDK
Sbjct: 175 NKIDK 179
>gi|24375888|ref|NP_719931.1| GTP-binding protein BipA [Shewanella oneidensis MR-1]
gi|24350861|gb|AAN57375.1| GTP-binding protein BipA [Shewanella oneidensis MR-1]
Length = 603
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/596 (57%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVSEDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V +++ P Q+QI L+Y+SY+G IG+GRI G IK+ Q V ++ G D K
Sbjct: 189 TIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVI-GADGKVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+R V+ A +GDIV ITG+ E+ I T+C +P L++DEPTL
Sbjct: 248 NGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR-FAVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL EP+E L VD+EE +QG +++KL R ++
Sbjct: 367 SILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEHQGTVIEKLGIRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 427 KDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGPHKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG ++GIH+R NDL VN +K KQL
Sbjct: 484 ANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TPK+IR+RK+ L EN+RK+
Sbjct: 544 TNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|291613949|ref|YP_003524106.1| translation initiation factor IF-2 [Sideroxydans lithotrophicus
ES-1]
gi|291584061|gb|ADE11719.1| translation initiation factor IF-2 [Sideroxydans lithotrophicus
ES-1]
Length = 859
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/540 (62%), Positives = 438/540 (81%), Gaps = 3/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNK- 59
MS+K++ +IK LMK+G MVTINQVLDQETAMI+VEE+GH A +K +DP++FLL +
Sbjct: 294 MSIKAAEIIKTLMKMGSMVTINQVLDQETAMIVVEELGHKAIQAKPDDPDAFLLEAVDHG 353
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
++ ES RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G IT
Sbjct: 354 DVVMES--RAPVVTVMGHVDHGKTSLLDYIRRTRVASGEAGGITQHIGAYHVDTPRGMIT 411
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI HAK + VP++VAI KID
Sbjct: 412 FLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHAKAAEVPIVVAITKID 471
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K D N +R++Q+L++E V+PE++GG + F+ +SAKTG GI+ LLE I LQAE+LELKAP
Sbjct: 472 KPDANSERVRQELVAEGVVPEDWGGDAMFVEVSAKTGQGIDTLLEGILLQAEVLELKAPK 531
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
AKGV++E+RLDKGKG VAT+L+QSGTL+ D ++ G+ GR+R+ML+ENGK I EAG
Sbjct: 532 NASAKGVVVEARLDKGKGAVATLLVQSGTLKRGDAILVGSVSGRVRAMLDENGKVIDEAG 591
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PSIPVEIQGL++VP +G + V+ +EKKAREI LFRQGKFRDVKL+KQ+ K ENMF +
Sbjct: 592 PSIPVEIQGLSEVPVAGADFLVLADEKKAREIALFRQGKFRDVKLAKQQAAKLENMFEQM 651
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
+ +V+ L +I+K DV GS E + SL+ LST +VK+ +IH+ VG I+ESD+NLA+ASKA
Sbjct: 652 GEGEVRTLSLIVKADVQGSLEAIAGSLQKLSTAEVKVSIIHSGVGAISESDVNLALASKA 711
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
IIIGFN RADA+ R+LA+ + ++IRY+NIIY ++ EIK+ ++ ++ EKKE+++G+ E+R
Sbjct: 712 IIIGFNSRADATARRLAESSGVDIRYYNIIYAMVDEIKAALSGMLAPEKKESIIGMVEVR 771
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
QV ++KV IAGCY+ EG+I+R S +R+LRN +I TGELDSLKRFKD+ KEVK+ FEC
Sbjct: 772 QVFHISKVGTIAGCYVTEGMIKRSSSVRVLRNNVVIHTGELDSLKRFKDDAKEVKSNFEC 831
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 366 VMGHVDHGKTSLLDYIRRTRVASGEAGGITQHI-GAYHVDTPRGMITF------------ 412
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
+DTPGH F R D V+L++ A +G MPQT+ A K PIVV +
Sbjct: 413 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIHHA-KAAEVPIVVAIT 468
Query: 1046 KIDRSNARPEWV 1057
KID+ +A E V
Sbjct: 469 KIDKPDANSERV 480
>gi|345865538|ref|ZP_08817719.1| GTP-binding protein TypA/BipA [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345123346|gb|EGW53245.1| GTP-binding protein TypA/BipA [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 604
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+ EKERGITI SKN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDELLKQSGTLGERFGAVERVMDSNDQEKERGITILSKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT+KA G +PI+VVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFDHGLRPILVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARPEWV+D F+LFD+L A++EQLDFP++Y SA++GYA R+G+M LFE
Sbjct: 129 KIDKPGARPEWVIDQVFELFDRLGASDEQLDFPIVYASAINGYAGLEDTVREGDMSSLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++ PV + N PLQ+QI +L+Y+SY+G I +GRI G I+ Q VV++ D + +
Sbjct: 189 AIIEHCPVPDVDPNGPLQMQISNLDYNSYVGAIAVGRITRGTIRPNQQVVVVK-YDGEVH 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAK+ + + GL+R V EA +GDI+ ITG+E + T+CDP LP L++DEPT+
Sbjct: 248 KAKVGIVYGYLGLERHEVKEASAGDIIAITGMEAPNVSDTLCDPENVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AG+EGK++T+RQ+K RL+ E+ +N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNASPFAGKEGKYLTSRQLKERLERELIHNVALRVEEGT-DPEKFKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++L+ENMRREG+EL+VSRP VIF+ ++GE+ EPYE L VD+EE +QG IM+ L R G+L
Sbjct: 367 SVLLENMRREGFELAVSRPEVIFREIDGEVCEPYEQLTVDVEEQHQGAIMEALGARKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL+Y IPSRGLIGFQ EF+T T GTGL+ HVF+ Y + + R
Sbjct: 427 KDMVPDGKGRVRLDYVIPSRGLIGFQTEFMTSTSGTGLMYHVFDHYGEAQHGG---IAPR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GK + ++L+ LQ+RG++F + D VYEG I+GIHSRDNDL+VNP+K KQL
Sbjct: 484 KNGVLISNGQGKVLGFALFNLQERGKMFASPGDQVYEGQIVGIHSRDNDLVVNPLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG D+AI L P+K +LE A+EFI DDELVE+TP +R+RK+ LKE+ERK+
Sbjct: 544 TNVRASGKDDAIMLTPPLKFSLEQALEFIEDDELVELTPSAVRIRKKHLKEHERKR 599
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + E G + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDELLKQSGTLGERFGAVERVMDSNDQEKERGITILSKNTAINWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ I+ +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFDHGLRPILVV 127
Query: 176 NKIDK 180
NKIDK
Sbjct: 128 NKIDK 132
>gi|27364336|ref|NP_759864.1| GTP-binding protein TypA [Vibrio vulnificus CMCP6]
gi|37678384|ref|NP_932993.1| GTP-binding protein TypA [Vibrio vulnificus YJ016]
gi|320157728|ref|YP_004190107.1| GTP-binding protein TypA/BipA [Vibrio vulnificus MO6-24/O]
gi|27360454|gb|AAO09391.1| GTP-binding protein TypA/BipA [Vibrio vulnificus CMCP6]
gi|37197123|dbj|BAC92964.1| GTP-binding protein TypA [Vibrio vulnificus YJ016]
gi|319933040|gb|ADV87904.1| GTP-binding protein TypA/BipA [Vibrio vulnificus MO6-24/O]
Length = 609
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/596 (57%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLQSRGDVEERVMDSNDIEKERGITILAKNTAIRWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDCVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ +M PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWASLEEGETGEDMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + PLQ+QI L+YSSY+G IG+GR+ G++K+ Q V I+ G D K
Sbjct: 193 TIVDVVDAPNVDLDGPLQMQISQLDYSSYVGVIGVGRVTRGKVKANQQVTIV-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TICD +KP LP L++DEPT+
Sbjct: 252 NGKVGTVLGYMGLERHEVEQATAGDIIAITGLGELKISDTICDVNKPEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG EGK++T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGLEGKYVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K NG+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKEENGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRLDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 INGVLIANAAGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP+NIR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPITMTLEQALEFIDDDELVEVTPENIRIRKKFLTESDRKR 603
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLQSRGDVEERVMDSNDIEKERGITILAKNTAIRWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDCVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|319793512|ref|YP_004155152.1| translation initiation factor if-2 [Variovorax paradoxus EPS]
gi|315595975|gb|ADU37041.1| translation initiation factor IF-2 [Variovorax paradoxus EPS]
Length = 984
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/539 (61%), Positives = 434/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+ VIK LMKLGQM TINQ LDQ+TAMILVEEMGH A + L+DPE+F + +
Sbjct: 419 MAVKAGEVIKQLMKLGQMATINQSLDQDTAMILVEEMGHNAVVAALDDPEAFTDEDVSAQ 478
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
TAE+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ++F
Sbjct: 479 -TAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETERGMVSF 537
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VAINK+DK
Sbjct: 538 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINKVDK 597
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D NLDR+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLE + LQAE+LELKAPV
Sbjct: 598 PDANLDRVKQELVAEEVVPEEYGGDVPFVPVSAKTGQGIDDLLEQVLLQAEVLELKAPVD 657
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVLIQSGTL+ D+V+AG++YGR+R+ML+ENGK I AGP
Sbjct: 658 AAAKGLVIEAQLDKGRGPVATVLIQSGTLKAGDVVLAGSTYGRVRAMLDENGKTIKTAGP 717
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+K + +NMF D++
Sbjct: 718 SIPVEIQGLTEVPQAGDEFMVMADERRAREIATYRAGKFRNTKLAKAQAANLQNMFTDLS 777
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V+ L IIIK DV GS+E L +SL L+T++VK+Q+++ VG I+ESDINLAIASKAI
Sbjct: 778 AGEVQTLRIIIKADVQGSQEALAQSLLKLATEEVKVQMVYAGVGGISESDINLAIASKAI 837
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ N + + Y++IIY+ + EIK ++ ++ E++E ++G AEIR
Sbjct: 838 VIGFNVRADAGARKLAESNGVQLNYYSIIYDAVDEIKVAMSGMLAPERREEIIGSAEIRT 897
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI G + R + R+LR+ +I+TGE+DS+KR KD+V+EV+ GFEC
Sbjct: 898 VFVASKIGTVAGSYITSGSVNRSAHFRLLRDNVVIYTGEVDSIKRMKDDVREVREGFEC 956
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 30/167 (17%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E ERG+ F
Sbjct: 491 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETERGMVSF------------ 537
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A G +V +NK
Sbjct: 538 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINK 594
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQL------DFPVIYTSALHG 1087
+D+ DA D + EE + D P + SA G
Sbjct: 595 VDKP--------DANLDRVKQELVAEEVVPEEYGGDVPFVPVSAKTG 633
>gi|350552429|ref|ZP_08921630.1| GTP-binding protein TypA [Thiorhodospira sibirica ATCC 700588]
gi|349794168|gb|EGZ47988.1| GTP-binding protein TypA [Thiorhodospira sibirica ATCC 700588]
Length = 607
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/597 (59%), Positives = 451/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + ++ R+MDSN++EKERGITI +KN +IE+
Sbjct: 10 AIIAHVDHGKTTLVDRLLQQSGTFSERATLSERMMDSNDLEKERGITILAKNTAIEWRDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARPEWVVD FDLFD+L A+EEQLDFPV+Y SAL G+A + G+M PLFE
Sbjct: 130 KIDRPGARPEWVVDQVFDLFDRLGASEEQLDFPVVYCSALKGFAGLSPDIEDGDMTPLFE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL+ V + + P Q+QI SL+Y+S+ G IGIGRI G+IKS V ++ +
Sbjct: 190 TILEKVSPPDVDFDGPFQMQISSLDYNSFQGLIGIGRITRGQIKSNSPVKAID-REGNVR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I QI FKGL+RV V +A +GDI+ +G++E+ I T+C P+ L L +DEPT+
Sbjct: 249 SGRILQILGFKGLERVEVPQANAGDIIAFSGMDELYISDTLCAPAAVEALRALTVDEPTM 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AGREGK+IT+R ++ RL E+K+N+ LRV + D ++VSGRGELHL
Sbjct: 309 SMTFQVNTSPFAGREGKYITSRNLRERLFEEVKHNVALRVEETADPDK-FKVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTL-NGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
+ILIENMRREGYEL VSRP VI +TL +G EPYE + VD+EE +QG IM+KL R +
Sbjct: 368 SILIENMRREGYELGVSRPEVIVRTLEDGNKEEPYEMVTVDVEEAHQGAIMEKLGSRRAE 427
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L ++ + K RVRL+Y+IPSRGLIGFQ EF+T T GTG++ HVF+ Y + + K
Sbjct: 428 LLDMIPDGKGRVRLDYKIPSRGLIGFQTEFLTTTSGTGILHHVFDSYGEYRPGR---VAK 484
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLI+ GK++ Y+L+ LQ+RGRLFI + VYEGMIIGIHSRDNDL+VNP+K KQ
Sbjct: 485 RNNGVLIANGVGKSLGYALFNLQERGRLFIGPGEEVYEGMIIGIHSRDNDLVVNPLKAKQ 544
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTNIR++GSDE I L PI+++LE A+EFI +DELVE+TPK+IRLRK+ L E+ERKK
Sbjct: 545 LTNIRAAGSDENILLTPPIRLSLEQALEFIEEDELVEVTPKSIRLRKKLLLEHERKK 601
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + FSE +++ + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDRLLQQSGTFSERATLSERMMDSNDLEKERGITILAKNTAIEWRD 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G IV +
Sbjct: 69 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|394988384|ref|ZP_10381220.1| hypothetical protein SCD_00785 [Sulfuricella denitrificans skB26]
gi|393792380|dbj|GAB70859.1| hypothetical protein SCD_00785 [Sulfuricella denitrificans skB26]
Length = 905
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/539 (61%), Positives = 441/539 (81%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK +MK+G M TINQ+LDQETAMILVEEMGHVA + L+ PE++L ++
Sbjct: 341 MAVKAAAVIKVMMKMGTMATINQMLDQETAMILVEEMGHVAKPAALDSPEAYLADDDVHE 400
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ E RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G +TF
Sbjct: 401 VQLEP--RAPVVTVMGHVDHGKTSLLDYIRRTRVAHGEAGGITQHIGAYHVETPRGMVTF 458
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TD+V+LVVAADDGVMPQT EA+ HAK +GVP++VA+NKIDK
Sbjct: 459 LDTPGHEAFTAMRARGAKATDVVILVVAADDGVMPQTIEAVHHAKAAGVPVVVAMNKIDK 518
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +RIKQ+L+++ V+PE++GG + F+ +SAK+G GI++LLE + LQAE+LELKA
Sbjct: 519 PEANPERIKQELVAQGVVPEDWGGDTMFVGVSAKSGEGIDELLEGVLLQAEVLELKAQKN 578
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKG+GPVAT+L+Q+GTL+ D+++AG ++GR+R+ML+ENG + EAGP
Sbjct: 579 APAKGLVIEARLDKGRGPVATILVQTGTLKAGDMLLAGGAFGRVRAMLDENGDMVKEAGP 638
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GE++ V+ +E+KAREI LFRQGKFRDVKL+KQ K ENMF+ +
Sbjct: 639 SIPVEIQGLSEVPMAGEDVIVLNDERKAREIALFRQGKFRDVKLAKQHAAKLENMFDQMG 698
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L +IIKTDV GS E L +L+ LSTD+VK+ +IH+ VG I ESDINLA+ASKA+
Sbjct: 699 EGEVRVLPLIIKTDVQGSYEALAHALQKLSTDEVKVNIIHSGVGAITESDINLALASKAV 758
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN RADA+ RKL Q +++RY+ IIY+ + EIK+ ++ ++ E+KE++LGL E+R+
Sbjct: 759 VIGFNSRADATARKLVQSAGVDVRYYTIIYDAVDEIKAALSGMLAPERKESVLGLVEVRE 818
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V ++KV +AGCY+L+G I+R S +R+LR+ +I T ELDSLKRFKD+VKEVK+GFEC
Sbjct: 819 VYKISKVGTVAGCYVLDGTIKRGSMVRVLRDSVVIHTCELDSLKRFKDDVKEVKSGFEC 877
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 412 VMGHVDHGKTSLLDYIRRTRVAHGEAGGITQHI-GAYHVETPRGMVTF------------ 458
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V +NK
Sbjct: 459 ---LDTPGHEAFTAMRARGAKATDVVILVVAADDGVMPQTIEAVHHAKAAGVPVVVAMNK 515
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 516 IDKPEANPERI 526
>gi|78046588|ref|YP_362763.1| GTP-binding elongation factor protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|294627870|ref|ZP_06706449.1| GTP-binding elongation factor protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294664615|ref|ZP_06729954.1| GTP-binding elongation factor protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|325925354|ref|ZP_08186756.1| GTP-binding protein TypA/BipA [Xanthomonas perforans 91-118]
gi|346723913|ref|YP_004850582.1| GTP-binding elongation factor protein [Xanthomonas axonopodis pv.
citrumelo F1]
gi|381171760|ref|ZP_09880900.1| GTP-binding protein TypA/BipA [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|390992788|ref|ZP_10263005.1| GTP-binding protein TypA/BipA [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|418518923|ref|ZP_13085052.1| GTP-binding elongation factor protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418522310|ref|ZP_13088347.1| GTP-binding elongation factor protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|78035018|emb|CAJ22663.1| GTP-binding elongation factor protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292597784|gb|EFF41942.1| GTP-binding elongation factor protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292605616|gb|EFF48928.1| GTP-binding elongation factor protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|325544232|gb|EGD15613.1| GTP-binding protein TypA/BipA [Xanthomonas perforans 91-118]
gi|346648660|gb|AEO41284.1| GTP-binding elongation factor protein [Xanthomonas axonopodis pv.
citrumelo F1]
gi|372552456|emb|CCF69980.1| GTP-binding protein TypA/BipA [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|380687720|emb|CCG37387.1| GTP-binding protein TypA/BipA [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|410701425|gb|EKQ59949.1| GTP-binding elongation factor protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410701949|gb|EKQ60463.1| GTP-binding elongation factor protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 609
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/600 (57%), Positives = 455/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT+EQLDFP++YTSAL+GYA+ +S R+G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATDEQLDFPIVYTSALNGYASLDSDVREGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q++I L+Y++++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMQHVSAPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMPVSVID-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ + A +GDIV I+GI+E+ I T+C P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFLGLERIEQDTAEAGDIVAISGIQELTISDTVCALDHPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+++RLD E +N+ L+V + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLRDRLDREKVHNVALKVEEGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+L EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGKLMEPIEQLVVDIEEQHQGGVMEKLGTR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ G AY+L L++RGRLF D VYEG ++GIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAPGATPAYALGPLEERGRLFAAEGDNVYEGQLVGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L IK TLE A++FI DDELVE+TPK IRLRK+FL E++RK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKFLTESDRKR 604
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVTNHG 116
+ I+ HVDHGKT+L+D + K + SE + + + N +T G
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQG 68
Query: 117 S-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ I +DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|395004717|ref|ZP_10388721.1| translation initiation factor IF-2, partial [Acidovorax sp. CF316]
gi|394317341|gb|EJE53912.1| translation initiation factor IF-2, partial [Acidovorax sp. CF316]
Length = 661
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/539 (61%), Positives = 439/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K++ VIK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F ++ +
Sbjct: 96 MSIKANEVIKALMKMGQMVTINQPLDQDTAMIMVEEMGHKAVVAALDDPEAFTDDDSAQK 155
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G I+F
Sbjct: 156 -DVELLPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETPRGMISF 214
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VA+NKIDK
Sbjct: 215 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAVNKIDK 274
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L+ E V+PEEYGG SPF+S+SAKTG GI+ LLE + LQAE+LELKAPV
Sbjct: 275 PDANADRVKQELVVESVVPEEYGGESPFVSVSAKTGQGIDDLLEQVLLQAEVLELKAPVD 334
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+ AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG +YGR+R+ML+ENG+ AGP
Sbjct: 335 SLAKGLVIEAQLDKGRGPVATVLVQSGTLKVGDVVLAGQTYGRVRAMLDENGRVAKTAGP 394
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF D+
Sbjct: 395 SIPVEIQGLTEVPQAGDEFMVLTDERRAREIATYRAGKFRNTKLAKQQAAKLENMFADMT 454
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L II+K+DV GS+E L++SL LSTD+VK+Q+++ AVG I+ESDINLAIASKAI
Sbjct: 455 AGEVKMLPIIVKSDVQGSQEALSQSLLKLSTDEVKVQLVYAAVGAISESDINLAIASKAI 514
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ N +++ Y++IIY+ + E++ ++ ++ E++E ++G AEIR
Sbjct: 515 VIGFNVRADAGARKLAESNGVDLHYYSIIYDAVDELRVAMSGMLAPEQREEIIGTAEIRT 574
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + K+ IAG YI G++ R+++ R+LR+ +++TGE+DS+KR KD+VKEVK GFEC
Sbjct: 575 VFVATKIGTIAGSYITSGMVHRNARFRLLRDNVVVYTGEVDSVKRLKDDVKEVKEGFEC 633
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+
Sbjct: 168 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETPRGM--------------- 211
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I+ +DTPGH F R D V+L++ A +G MPQT+ + A G +V VNK
Sbjct: 212 ISFLDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAVNK 271
Query: 1047 IDRSNARPEWV 1057
ID+ +A + V
Sbjct: 272 IDKPDANADRV 282
>gi|383316449|ref|YP_005377291.1| GTP-binding protein TypA/BipA [Frateuria aurantia DSM 6220]
gi|379043553|gb|AFC85609.1| GTP-binding protein TypA/BipA [Frateuria aurantia DSM 6220]
Length = 610
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/600 (56%), Positives = 451/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I++ G
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTLAERTVLAERVMDSNDQEKERGITILAKNTAIKWQGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFKPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARPEWVV+ +DLFD+L AT EQ++FP++Y SAL+GYA+ + R+G+M PL+E
Sbjct: 130 KIDRPGARPEWVVEQVWDLFDRLGATPEQMEFPIVYASALNGYASLDDTTREGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++ P + + P Q++I L+Y++++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMQHAPKPEVDPEGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMPVAVIDR-EGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ F GL+R+ +EA +GDIV I+GI E+ I TI P P LP L +DEPT+
Sbjct: 249 SGKVLQVMGFLGLERIEQDEAEAGDIVAISGIAELTISDTITAPESPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP G + GKF+T+RQI+ RLD E +N+ LRV ++ D + VSGRG
Sbjct: 309 SMTFQVNNSPFVGNKDLSGGKFLTSRQIRERLDREKVHNVALRV-EDGSDADKFLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+ EPYE L VD+EEI+QG +M++L R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGQKMEPYEQLVVDVEEIHQGPVMERLGIR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRLEY IP+RGLIGFQN+F TLT+G+GL+ HVF+ Y P K
Sbjct: 428 KGQLKNMEPDGKGRVRLEYMIPARGLIGFQNQFKTLTQGSGLLFHVFDHYGP---KEDGQ 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGVLI+ +G AYSL LQ+RG+LF D VYEG +IGIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVLIANAAGTTPAYSLGPLQERGKLFAAEGDSVYEGQLIGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AIQL IK +LE A++FI++DELVE+TPK IRLRK+ L EN+RK+
Sbjct: 545 PKPLTNMRASGKDDAIQLTPAIKFSLEQALDFIDEDELVEVTPKEIRLRKKHLTENDRKR 604
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + +E + + + N IT L
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTLAERTVLAERVMDSNDQEKERGITILAKNTAIKWQG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+++V A DG MPQTR A G IV I
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVI 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|121996962|ref|YP_001001749.1| GTP-binding protein TypA [Halorhodospira halophila SL1]
gi|121588367|gb|ABM60947.1| GTP-binding protein TypA [Halorhodospira halophila SL1]
Length = 605
Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/601 (56%), Positives = 452/601 (75%), Gaps = 8/601 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDS+++E+ERGITI SKN +I++ G
Sbjct: 9 AIIAHVDHGKTTLVDQLLQQSGTLDARGGDAERVMDSDDLERERGITILSKNTAIDWQGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSM D+VLLL+DA +GPMPQTRFVT KA LG +PIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMADSVLLLVDAQDGPMPQTRFVTEKAFALGLQPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WV+D TFDLF L ATEEQLDFPVIY SAL GYA E G+M PLF+
Sbjct: 129 KIDRPGARPNWVIDQTFDLFADLGATEEQLDFPVIYASALGGYAGEEPNIDSGDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + +S+ P Q+QI +L+YS YLG+IGIGRI G++ V +++ ++
Sbjct: 189 TIVDQVRPPQVDSDGPFQMQITTLDYSKYLGQIGIGRIKRGQVTPGTSVTVVDREGNE-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ + F GL+RV + A +G++V ITGI+ + I T+CDP + LP L +DEPT+
Sbjct: 248 SGRVQTLLGFLGLERVEIESADAGNLVAITGIDPLDISDTLCDPQQVEALPALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AGREG+++T+RQI+ RLD E+K+N+ LRV + D + VSGRG LHL
Sbjct: 308 SMGFEVNKSPFAGREGRYVTSRQIRERLDRELKSNVALRV-EATDDPDRFHVSGRGLLHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKT-LNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++++ENMRREGYE++VSRP VI +T +G EPYE+L DIE +QG ++ LN RGG
Sbjct: 367 SVVLENMRREGYEIAVSRPAVITRTGEDGRTEEPYEHLVADIESDHQGAVIDALNERGGR 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L++++++ RVRLEY IP+RGLIGFQ +F++LT GTG+++HVF+ Y P +S ++G+
Sbjct: 427 LQDMQVDSNGRVRLEYTIPARGLIGFQTDFMSLTSGTGILTHVFDHYGP---RSDKEVGQ 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
RR G +IS GKAVAY+L+ LQ+RGRL ++ ND VYEGM+IG++SRD D+ VNP+K K+
Sbjct: 484 RREGAMISGNDGKAVAYALFNLQERGRLMVSPNDPVYEGMLIGLNSRDADMTVNPLKAKE 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLH 1524
LTN+R++GSDE + L P+++TLEYA+E INDDELVEITP++IRLRKR L E+ERK+ H
Sbjct: 544 LTNVRAAGSDENVILTPPMQLTLEYALELINDDELVEITPQSIRLRKRLLTESERKR--H 601
Query: 1525 K 1525
K
Sbjct: 602 K 602
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + GG + + + + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLQQSGTLDARGGDAERVMDSDDLERERGITILSKNTAIDWQG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMADSVLLLVDAQDGPMPQTRFVTEKAFALGLQPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|190572976|ref|YP_001970821.1| GTP-binding protein [Stenotrophomonas maltophilia K279a]
gi|190010898|emb|CAQ44507.1| putative GTP-binding protein [Stenotrophomonas maltophilia K279a]
gi|456738126|gb|EMF62803.1| GTP-binding protein TypA/BipA [Stenotrophomonas maltophilia EPM1]
Length = 615
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/606 (57%), Positives = 448/606 (73%), Gaps = 15/606 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG- 984
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWEDK 69
Query: 985 -----TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFK
Sbjct: 70 KTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFK 129
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVVVNK+DR ARPEWV+D FDLFDKL AT EQLDFP++Y S L+GYA R G+
Sbjct: 130 PIVVVNKVDRPGARPEWVIDQVFDLFDKLGATNEQLDFPIVYASGLNGYAGLEDTVRDGD 189
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PL+EAI+++ P + + P Q++I L+Y++++G IGIGRI G +K V +++
Sbjct: 190 MTPLYEAIMQHAPKPEVDPEGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMQVAVIDR 249
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
K N K+ Q+ F GL+R+ + A +GDIV I+GI+E+ I TIC P P LP L
Sbjct: 250 EGKKRN-GKVLQVLGFMGLERIEQDSAEAGDIVAISGIQELTISDTICAPDFPEALPALT 308
Query: 1220 IDEPTLTINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
+DEPT+++ F VNNSP AG + GKF+T+RQIK+RLD E +N+ L+V Q + D +
Sbjct: 309 VDEPTISMTFQVNNSPFAGNKDLSGGKFLTSRQIKDRLDREKVHNVALKVEQLEDADK-F 367
Query: 1276 EVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIM 1335
VSGRGELHL++LIENMRREGYEL+VSRP VI K ++G+L EP E L VDIEEI+QG +M
Sbjct: 368 LVSGRGELHLSVLIENMRREGYELAVSRPEVIIKEIDGQLMEPIEQLVVDIEEIHQGGVM 427
Query: 1336 QKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFY 1395
+KL R G LKN+E + K RVRLEY+IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P
Sbjct: 428 EKLGTRKGQLKNMESDGKGRVRLEYQIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGP-- 485
Query: 1396 NKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDL 1455
K + + KR NGV+I+ G AYSL LQ+RG+LF D VYEG ++GIHS+DNDL
Sbjct: 486 -KEQGAIAKRINGVMIANAPGTTPAYSLGPLQERGKLFAAEGDNVYEGQLVGIHSKDNDL 544
Query: 1456 LVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLK 1515
VN IK K LTN+R+SG D+AIQL IK +LE A++FI DDELVEITPK IRLRK+FL
Sbjct: 545 TVNAIKTKPLTNMRASGKDDAIQLTPAIKYSLEQALDFIEDDELVEITPKEIRLRKKFLT 604
Query: 1516 ENERKK 1521
E++RKK
Sbjct: 605 ESDRKK 610
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + + N ++ + +IT+
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWED 68
Query: 121 -----------LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
+DTPGH F R + D V+++V A DG MPQTR A G
Sbjct: 69 KKTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGF 128
Query: 170 PLIVAINKIDK 180
IV +NK+D+
Sbjct: 129 KPIVVVNKVDR 139
>gi|381159810|ref|ZP_09869042.1| GTP-binding protein TypA/BipA [Thiorhodovibrio sp. 970]
gi|380877874|gb|EIC19966.1| GTP-binding protein TypA/BipA [Thiorhodovibrio sp. 970]
Length = 609
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/600 (57%), Positives = 447/600 (74%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL+QSGT R+MDSN++EKERGITI SKN ++
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGDRFGPVERVMDSNDLEKERGITILSKNTALRLTLK 68
Query: 983 -NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT KA + G +PI
Sbjct: 69 DQDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTTKAFQHGLRPI 128
Query: 1042 VVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMI 1101
VVVNKID+ ARP WVVD FDLFD+L A++EQLDFP++Y SA++GYA + + R+G+M
Sbjct: 129 VVVNKIDKPGARPSWVVDQVFDLFDRLGASDEQLDFPIVYASAINGYAGLSEEVREGDMT 188
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
PLFEAI+++ P + + P Q+QI +L+YSS++G IG+GRI G +K Q VV++
Sbjct: 189 PLFEAIVEHCPAPAVDPDGPFQMQISTLDYSSFVGAIGVGRIQRGVLKPNQQVVVVKRDG 248
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNID 1221
D+ +AK+ + + GL+R V EA +GDIV +TG++ + T+C P LP L +D
Sbjct: 249 DR-QRAKVGLVYGYMGLERSEVKEARAGDIVAVTGMDAPNVSDTLCHPDAVEALPPLTVD 307
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
EPT+T+ F VN SP AG++GK++T+RQ+K+RL+ E+ +N+ LRV + D + VSGRG
Sbjct: 308 EPTVTMTFQVNTSPFAGKDGKYLTSRQLKDRLERELIHNVALRVEEGT-DPEKFRVSGRG 366
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL+IL+ENMRREGYE++VSRP VIF+ ++G + EPYE L VD+EE NQG IMQ L R
Sbjct: 367 ELHLSILLENMRREGYEMAVSRPEVIFREVDGVICEPYEQLTVDLEEANQGAIMQALGER 426
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G+LKN+ + K RVRL+Y IPSRGLIGFQ EF++LT GTGL HVF+ Y ++
Sbjct: 427 KGELKNMVPDGKGRVRLDYEIPSRGLIGFQTEFMSLTSGTGLKHHVFDHYG---AANQGG 483
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ RRNG +I+ GK + Y+L+ LQDRGRL + + VYEG ++GIHSRDNDL+VNP+K
Sbjct: 484 IAPRRNGAMIANSQGKVLGYALFNLQDRGRLLVAPGEEVYEGQVVGIHSRDNDLVVNPLK 543
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTNIR++GSDE I L PI+ +LE A+EFI DDELVEITP IR+RKRFLKE+ERK+
Sbjct: 544 AKQLTNIRAAGSDENILLTPPIRFSLEQALEFIEDDELVEITPAAIRIRKRFLKEHERKR 603
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGDRFGPVERVMDSNDLEKERGITILSKNTALRLTL 67
Query: 122 ----------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPL 171
DTPGH F R + D V+L+V A +G MPQTR A G+
Sbjct: 68 KDQDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTTKAFQHGLRP 127
Query: 172 IVAINKIDK 180
IV +NKIDK
Sbjct: 128 IVVVNKIDK 136
>gi|411011211|ref|ZP_11387540.1| GTP-binding protein TypA [Aeromonas aquariorum AAK1]
gi|423199161|ref|ZP_17185744.1| GTP-binding protein TypA/BipA [Aeromonas hydrophila SSU]
gi|404629515|gb|EKB26262.1| GTP-binding protein TypA/BipA [Aeromonas hydrophila SSU]
Length = 603
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/596 (57%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + RIMDSN++E+ERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLDRTSEGQERIMDSNDLERERGITILAKNTAIRWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A + NM PLF+
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATLDQDVESENMEPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V +++ Q+QI L+Y+SY+G IGIGRI GR+K+ Q V ++ G D K
Sbjct: 189 AIVDNVEAPAADTDGAFQMQISQLDYNSYVGVIGIGRITRGRVKTNQQVTVV-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL R V +A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 TGKVGQVLGYLGLSRTEVADAQAGDIIAITGLGELKISDTICDNGAVEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 NMTFQVNTSPFAGKEGKFVTSRNILERLNQELVHNVALRVEETDDPDK-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI +T++G L EP+E + VD+EE +QG +M++L R G++
Sbjct: 367 SILIENMRREGYELAVSRPEVILRTVDGVLQEPFETVTVDVEEAHQGSVMEQLGLRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ IPSRGLIGFQ EF+TLT GTGL+ H F+ Y P S +G+R
Sbjct: 427 TNMTPDGKGRVRLDFMIPSRGLIGFQTEFMTLTSGTGLLYHTFDHYGPHKGGS---IGER 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +GKA+ Y+L+ LQDRGRLFI H VYEG +IGIHSR NDL VN +K KQL
Sbjct: 484 QNGVLISNATGKALTYALFGLQDRGRLFIGHATEVYEGQVIGIHSRSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PI+++LE A+EFI++DELVE+TPK+IR+RK+ L E +RK+
Sbjct: 544 TNMRASGTDEAQVLTPPIRMSLEQALEFIDNDELVEVTPKSIRIRKKLLTELDRKR 599
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLDRTSEGQERIMDSNDLERERGITILAKNTAIRWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|344343301|ref|ZP_08774170.1| GTP-binding protein TypA [Marichromatium purpuratum 984]
gi|343805232|gb|EGV23129.1| GTP-binding protein TypA [Marichromatium purpuratum 984]
Length = 608
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/608 (56%), Positives = 445/608 (73%), Gaps = 5/608 (0%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
+S + I L AIIAHVDHGKTTL+D LL+QSGT + R+MDSN +EKERGITI
Sbjct: 1 MSSKQIEKLRNIAIIAHVDHGKTTLVDQLLQQSGTLGERFGPVERVMDSNALEKERGITI 60
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
SKN +I +N RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT KA
Sbjct: 61 LSKNTAIRWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAREGPMPQTRFVTSKA 120
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
G +PIVVVNKIDR ARP+WV+D FDLFD+L AT+EQLDFP++Y SAL+GYA
Sbjct: 121 FAHGLRPIVVVNKIDRPGARPDWVIDQVFDLFDRLGATDEQLDFPIVYASALNGYAGLED 180
Query: 1094 KARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
R G+M PLF+AI+++ P + P Q+Q+ +L+Y++++G I +GRI G ++ Q
Sbjct: 181 DVRDGDMSPLFQAIVEHCPAPEVKPEAPFQMQVSTLDYNAFVGAIAVGRIRQGSVRPNQQ 240
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPN 1213
V ++ D K KI + + GLDR V+ A +GDIV +TGIE + T+CDP
Sbjct: 241 VTVVKR-DGTRQKVKIGLVYGYLGLDRHEVDSASAGDIVALTGIEAPNVSDTLCDPDHVE 299
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
+ L +DEPT+T+ F VN SP AGREGK++T+RQ+K+RL E+ +N+ LRV + +D
Sbjct: 300 PMTPLTVDEPTVTMTFQVNTSPFAGREGKYLTSRQLKDRLQRELIHNVALRVEEG-NDPE 358
Query: 1274 IYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGI 1333
+ VSGRGELHL+IL+ENMRREGYEL+VSRP VIF+ ++GE+ EPYE L VD++E QG
Sbjct: 359 KFRVSGRGELHLSILLENMRREGYELAVSRPEVIFREIDGEICEPYEQLTVDVDEECQGA 418
Query: 1334 IMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
IMQ L R +LK++ + K RVRL+Y IPSRGLIGFQ EF++LT GTGL HVFE Y P
Sbjct: 419 IMQALGERRAELKDMVPDGKGRVRLDYEIPSRGLIGFQTEFMSLTSGTGLKYHVFERYRP 478
Query: 1394 FYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDN 1453
+ + +RRNG LIS +GKA+ Y+L+ LQ+RGR+ ++ D +YEG ++GIHSRDN
Sbjct: 479 ---ATTGGIAERRNGALISNATGKALGYALFNLQERGRMLVSPGDEIYEGQVVGIHSRDN 535
Query: 1454 DLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRF 1513
DL VNP+K KQLTNIR++GSDE I L P+K TLE A+EFI DDELVEITP IR+RKR
Sbjct: 536 DLTVNPLKAKQLTNIRAAGSDENILLTPPVKFTLEQALEFIEDDELVEITPDAIRVRKRH 595
Query: 1514 LKENERKK 1521
L E +RK+
Sbjct: 596 LTEQDRKR 603
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDQLLQQSGTLGERFGPVERVMDSNALEKERGITILSKNTAIRWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR + A G+ IV +
Sbjct: 72 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAREGPMPQTRFVTSKAFAHGLRPIVVV 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|386717250|ref|YP_006183576.1| GTP-binding protein TypA/BipA [Stenotrophomonas maltophilia D457]
gi|384076812|emb|CCH11397.1| GTP-binding protein TypA/BipA [Stenotrophomonas maltophilia D457]
Length = 615
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/606 (57%), Positives = 448/606 (73%), Gaps = 15/606 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG- 984
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWEDK 69
Query: 985 -----TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFK
Sbjct: 70 KTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFK 129
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVVVNKIDR ARPEWV+D FDLFDKL AT EQLDFP++Y SAL+GYA R G+
Sbjct: 130 PIVVVNKIDRPGARPEWVIDQVFDLFDKLGATNEQLDFPIVYASALNGYAGLEDTVRDGD 189
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PL+EAI+++ P + + + P Q++I L+Y++++G IGIGRI G +K V +++
Sbjct: 190 MTPLYEAIMQHAPRPEVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMQVAVIDR 249
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
K N K+ Q+ F GL+R+ A +GDIV I+GI E+ I T+C P P LP L
Sbjct: 250 EGKKRN-GKVAQVLGFLGLERIEQETAEAGDIVAISGIPELTISDTLCHPDTPEALPALT 308
Query: 1220 IDEPTLTINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
+DEPT+++ F VNNSP AG + GKF+T+RQIK+RLD E +N+ L+V Q + D +
Sbjct: 309 VDEPTISMTFQVNNSPFAGNKDLSGGKFLTSRQIKDRLDREQVHNVALKVEQLEDADK-F 367
Query: 1276 EVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIM 1335
VSGRGELHL++LIENMRREGYEL+VSRP VI K ++G++ EP E L VDIEEI+QG +M
Sbjct: 368 LVSGRGELHLSVLIENMRREGYELAVSRPEVIIKEIDGQMMEPIEQLVVDIEEIHQGGVM 427
Query: 1336 QKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFY 1395
+KL R G LKN+E + K RVRLEY+IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P
Sbjct: 428 EKLGTRKGQLKNMEPDGKGRVRLEYQIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGP-- 485
Query: 1396 NKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDL 1455
K + + KR NGV+I+ G AYSL LQ+RG+LF D VYEG ++GIHS+DNDL
Sbjct: 486 -KEQGAIAKRINGVMIANAPGVTPAYSLGPLQERGKLFAAEGDNVYEGQLVGIHSKDNDL 544
Query: 1456 LVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLK 1515
VN IK K LTN+R+SG D+AIQL IK +LE A++FI DDELVEITPK IRLRK+FL
Sbjct: 545 TVNAIKTKPLTNMRASGKDDAIQLTPAIKYSLEQALDFIEDDELVEITPKEIRLRKKFLT 604
Query: 1516 ENERKK 1521
E++RKK
Sbjct: 605 ESDRKK 610
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + + N ++ + +IT+
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWED 68
Query: 121 -----------LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
+DTPGH F R + D V+++V A DG MPQTR A G
Sbjct: 69 KKTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGF 128
Query: 170 PLIVAINKIDK 180
IV +NKID+
Sbjct: 129 KPIVVVNKIDR 139
>gi|390950392|ref|YP_006414151.1| GTP-binding protein TypA/BipA [Thiocystis violascens DSM 198]
gi|390426961|gb|AFL74026.1| GTP-binding protein TypA/BipA [Thiocystis violascens DSM 198]
Length = 604
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/596 (57%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN +EKERGITI SKN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGDRFGPVERVMDSNALEKERGITILSKNTAIRWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT KA + G +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTSKAFEHGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D F+LFD+L AT+EQLDFP++Y SA++GYA G+M PLFE
Sbjct: 129 KIDRPGARPDWVIDQVFELFDRLGATDEQLDFPIVYASAINGYAGLEDTVSGGDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+ P + + ++P Q+Q+ +L YSS++G I +GRI G ++ Q +V++ D
Sbjct: 189 AIVKHCPAPEVDPDSPFQMQVSTLNYSSFVGAIAVGRIRHGSVRPNQQIVVVKN-DGTRY 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAKI + + GL+R V A +GDIV +TGIE + T+C P LP L +DEPT+
Sbjct: 248 KAKIGLVYGYLGLERYEVPSASAGDIVALTGIEAPNVSDTLCHPDHAYALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP GR+GK++T+RQ+K+RL+ E+ +N+ LRV + +D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFCGRDGKYLTSRQLKDRLERELIHNVALRVEEG-NDPEKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+ENMRREGYE++VSRP VIF+ ++G++ EPYE L VD++E +QG IMQ L R G+L
Sbjct: 367 SILLENMRREGYEMAVSRPEVIFREIDGKICEPYEQLTVDLDETSQGAIMQALGERRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + + RVRL+Y IPSRGLIGFQ EF++LT GTGL HVF+ Y P + + R
Sbjct: 427 KDMVPDGRGRVRLDYEIPSRGLIGFQTEFMSLTSGTGLKYHVFDRYRP---ANMGGIAPR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
RNG LIS +GKA+ Y+L+ LQ+RGR+ ++ D VYEG ++GIHSRDNDL VNP+K KQL
Sbjct: 484 RNGALISNGTGKALGYALFALQERGRMMVSPGDEVYEGQVVGIHSRDNDLTVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L P+K TLE A+EFI DDELVEITPK IR+RKR L ENERK+
Sbjct: 544 TNIRAAGSDENILLTPPVKFTLEQALEFIEDDELVEITPKFIRVRKRHLTENERKR 599
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGDRFGPVERVMDSNALEKERGITILSKNTAIRWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR + A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTSKAFEHGLRPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ D +
Sbjct: 128 NKIDRPGARPDWV 140
>gi|451823121|ref|YP_007459395.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775921|gb|AGF46962.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 948
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/543 (63%), Positives = 449/543 (82%), Gaps = 8/543 (1%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNE---Y 57
+S+K+ +IK+LMKLGQMVTINQVLDQETAMI+VEE+GH+A A+KL+DPE+FL +
Sbjct: 382 VSLKAGEIIKHLMKLGQMVTINQVLDQETAMIVVEELGHIAIAAKLDDPETFLDDSDVIS 441
Query: 58 NKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
N+N S+ RAP+VT+MGHVDHGKTSLLDYIRK N+ SEAGGITQHIGAYNV T+ GS
Sbjct: 442 NEN----SVPRAPVVTVMGHVDHGKTSLLDYIRKANIAGSEAGGITQHIGAYNVNTSFGS 497
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
ITFLDTPGHEAF AMRARGAK TDIVVLVVAADDGVMPQT+EAI+H K + +P+IVA+ K
Sbjct: 498 ITFLDTPGHEAFAAMRARGAKATDIVVLVVAADDGVMPQTKEAISHVKSASLPMIVALTK 557
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
DK NLD++KQ+LI+E+V+PEEYGG PFI +S+KTGVGI+ LLENI LQAEILELK+
Sbjct: 558 SDKQSSNLDKVKQELIAEEVVPEEYGGDVPFIPVSSKTGVGIDNLLENILLQAEILELKS 617
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILE 297
PV AKG++IE+ LDKG+GP++T+L+QSGTL DIV+ GA+YGRIR+ML+E G I
Sbjct: 618 PVNCNAKGIVIEASLDKGRGPISTILVQSGTLNKGDIVLVGATYGRIRAMLDEKGMPIQN 677
Query: 298 AGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFN 357
AGPSIPVEIQGLT+VP +G+ + V+ +E+KAREI LFRQGKFRD KLS+++ E+MF
Sbjct: 678 AGPSIPVEIQGLTEVPAAGDTVVVLNDERKAREIALFRQGKFRDSKLSRKQATTLESMFE 737
Query: 358 DI-NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIA 416
++ + +++L +IIK DV GS+E L+ SL LST++VK+ +IH AVG I+++DINLAIA
Sbjct: 738 NMSDSSDLQSLSVIIKADVQGSQEALSSSLIKLSTNEVKVNIIHAAVGGISDNDINLAIA 797
Query: 417 SKAIIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLA 476
S A +IGFNVRADAS +K + NN+N+RY+NIIY+ I ++K ++ L+ EKKE ++GL
Sbjct: 798 SNAFVIGFNVRADASAKKNSDSNNVNLRYYNIIYDAINDVKLAMSGLLSPEKKEEIIGLL 857
Query: 477 EIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAG 536
EIR+V ++K+ +AGC +LEG++++DSK+R+LRN +IWTG++DSL+RFKD+VKEVK+G
Sbjct: 858 EIREVYSISKIGSVAGCMVLEGIVKKDSKVRLLRNNVVIWTGQIDSLRRFKDDVKEVKSG 917
Query: 537 FEC 539
F+C
Sbjct: 918 FDC 920
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 108/252 (42%), Gaps = 36/252 (14%)
Query: 843 LGCGAHLKYLRRIGIDKLTLDKCLNIDTIIKYSEYERISSLIPIDILLSSFGIIYLSDLL 902
L G +K+L ++G +T+++ L+ +T + I++ G I ++ L
Sbjct: 384 LKAGEIIKHLMKLG-QMVTINQVLDQETAM---------------IVVEELGHIAIAAKL 427
Query: 903 S--KRFLHGQNLFLSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIM 960
+ FL ++ ++ ++ ++ HVDHGKT+L+D++ + A I
Sbjct: 428 DDPETFLDDSDVISNENSVPRAPVVTVMGHVDHGKTSLLDYIRK------------ANIA 475
Query: 961 DSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVE 1020
S + GIT ++ + I +DTPGH F R D V+L++ A +
Sbjct: 476 GS----EAGGITQHIGAYNVNTSFGSITFLDTPGHEAFAAMRARGAKATDIVVLVVAADD 531
Query: 1021 GPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVI 1080
G MPQT+ IV + K D+ ++ + V + +++ E D P I
Sbjct: 532 GVMPQTKEAISHVKSASLPMIVALTKSDKQSSNLDKVKQEL--IAEEVVPEEYGGDVPFI 589
Query: 1081 YTSALHGYANEN 1092
S+ G +N
Sbjct: 590 PVSSKTGVGIDN 601
>gi|451812263|ref|YP_007448717.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451778165|gb|AGF49113.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 948
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/539 (62%), Positives = 448/539 (83%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+ VIKNLMKLGQMVTINQVLDQETAMI+VEE GH A A+K++DPE FL N
Sbjct: 384 MSIKAGEVIKNLMKLGQMVTINQVLDQETAMIVVEEFGHTAIAAKIDDPEIFLDTSSISN 443
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A+S+ RAP+VT+MGHVDHGKTSLLDYIR+T V SEAGGITQHIGAYNV T+ GSITF
Sbjct: 444 --ADSMHRAPVVTVMGHVDHGKTSLLDYIRRTKVTNSEAGGITQHIGAYNVKTDIGSITF 501
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAF AMRARGAK+TDIVVLVVAADDGVMPQTREAI H K++ VP+IVA+ K DK
Sbjct: 502 LDTPGHEAFAAMRARGAKLTDIVVLVVAADDGVMPQTREAINHVKVANVPVIVALTKADK 561
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
NLD++KQ+LI+E++IPEEYGG+ PFI +SAKTG G++ LLENI LQ+E+LELKA V
Sbjct: 562 PSANLDKVKQELIAEEIIPEEYGGSVPFIPVSAKTGEGVDILLENIILQSEVLELKAQVD 621
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
T AKG++IE+ LDKG+GPVATVL+Q+GTL+ D+++ GA++GR+RSML+ENG +I +AGP
Sbjct: 622 TNAKGIVIEASLDKGRGPVATVLVQNGTLKKGDVILVGATFGRVRSMLDENGFSIEKAGP 681
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GLT VP + + L V+ +E+KAREI LFRQGKFRD KL++++ K E++F++I
Sbjct: 682 SIPVEIHGLTDVPSAADFLVVLSDERKAREIALFRQGKFRDSKLARKQADKLESIFDNIT 741
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
V+ L IIIK+DV GS+E + SL LS +++ ++++H AVG I+++DINLAIAS A+
Sbjct: 742 DSSVQALSIIIKSDVQGSQEAIASSLLKLSNNEICVKIVHAAVGGISDNDINLAIASNAV 801
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRAD+ +K A++NNI+IRY++IIY+ I +IK ++ ++ EK+E ++GL EIR+
Sbjct: 802 IIGFNVRADSIAKKNAELNNISIRYYSIIYDAINDIKQAMSGMLIPEKREEIIGLVEIRE 861
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V ++K+ K+AGC +L+G++++DS+IR++RN + WTG+++SLKRFKD+VKEV++GF+C
Sbjct: 862 VYSISKIGKVAGCMVLDGIVKKDSRIRLIRNNVVTWTGQIESLKRFKDDVKEVRSGFDC 920
Score = 55.1 bits (131), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R ++ +S + GIT +++ +
Sbjct: 455 VMGHVDHGKTSLLDYIRR------------TKVTNS----EAGGITQHIGAYNVKTDIGS 498
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGH F R + D V+L++ A +G MPQTR IV + K
Sbjct: 499 ITFLDTPGHEAFAAMRARGAKLTDIVVLVVAADDGVMPQTREAINHVKVANVPVIVALTK 558
Query: 1047 IDRSNA 1052
D+ +A
Sbjct: 559 ADKPSA 564
>gi|424667236|ref|ZP_18104261.1| GTP-binding protein TypA/BipA [Stenotrophomonas maltophilia Ab55555]
gi|401069371|gb|EJP77893.1| GTP-binding protein TypA/BipA [Stenotrophomonas maltophilia Ab55555]
Length = 631
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/606 (57%), Positives = 448/606 (73%), Gaps = 15/606 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG- 984
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +
Sbjct: 26 AIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWEDK 85
Query: 985 -----TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFK
Sbjct: 86 KTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFK 145
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVVVNK+DR ARPEWV+D FDLFDKL AT EQLDFP++Y S L+GYA R G+
Sbjct: 146 PIVVVNKVDRPGARPEWVIDQVFDLFDKLGATNEQLDFPIVYASGLNGYAGLEDTVRDGD 205
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PL+EAI+++ P + + P Q++I L+Y++++G IGIGRI G +K V +++
Sbjct: 206 MTPLYEAIMQHAPKPEVDPEGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMQVAVIDR 265
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
K N K+ Q+ F GL+R+ + A +GDIV I+GI+E+ I TIC P P LP L
Sbjct: 266 EGKKRN-GKVLQVLGFMGLERIEQDSAEAGDIVAISGIQELTISDTICAPDFPEALPALT 324
Query: 1220 IDEPTLTINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
+DEPT+++ F VNNSP AG + GKF+T+RQIK+RLD E +N+ L+V Q + D +
Sbjct: 325 VDEPTISMTFQVNNSPFAGNKDLSGGKFLTSRQIKDRLDREKVHNVALKVEQLEDADK-F 383
Query: 1276 EVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIM 1335
VSGRGELHL++LIENMRREGYEL+VSRP VI K ++G+L EP E L VDIEEI+QG +M
Sbjct: 384 LVSGRGELHLSVLIENMRREGYELAVSRPEVIIKEIDGQLMEPIEQLVVDIEEIHQGGVM 443
Query: 1336 QKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFY 1395
+KL R G LKN+E + K RVRLEY+IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P
Sbjct: 444 EKLGTRKGQLKNMESDGKGRVRLEYQIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGP-- 501
Query: 1396 NKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDL 1455
K + + KR NGV+I+ G AYSL LQ+RG+LF D VYEG ++GIHS+DNDL
Sbjct: 502 -KEQGAIAKRINGVMIANAPGTTPAYSLGPLQERGKLFAAEGDNVYEGQLVGIHSKDNDL 560
Query: 1456 LVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLK 1515
VN IK K LTN+R+SG D+AIQL IK +LE A++FI DDELVEITPK IRLRK+FL
Sbjct: 561 TVNAIKTKPLTNMRASGKDDAIQLTPAIKYSLEQALDFIEDDELVEITPKEIRLRKKFLT 620
Query: 1516 ENERKK 1521
E++RKK
Sbjct: 621 ESDRKK 626
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + + N ++ + +IT+
Sbjct: 25 IAIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWED 84
Query: 121 -----------LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
+DTPGH F R + D V+++V A DG MPQTR A G
Sbjct: 85 KKTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGF 144
Query: 170 PLIVAINKIDK 180
IV +NK+D+
Sbjct: 145 KPIVVVNKVDR 155
>gi|374622187|ref|ZP_09694714.1| GTP-binding protein TypA [Ectothiorhodospira sp. PHS-1]
gi|373941315|gb|EHQ51860.1| GTP-binding protein TypA [Ectothiorhodospira sp. PHS-1]
Length = 606
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+ SGT + R+MDSN +EKERGITI +KN ++E+NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLQHSGTLDARAQVVERMMDSNALEKERGITILAKNTALEWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RIN++DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA +GF+PIVVVN
Sbjct: 69 RINVVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTAKAFAMGFRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD+L A+EEQLDFPV+Y SAL G+A GNM PLF+
Sbjct: 129 KIDRPGARPDWVVDQIFDLFDRLGASEEQLDFPVVYCSALKGFAGLEPGVTDGNMDPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
++ VP + P Q+Q+ SL+Y+SY G IGIGRI G+I++ V +M+ + N
Sbjct: 189 TVVDKVPPPTVDPEGPFQMQVSSLDYNSYQGLIGIGRITRGKIRTNTAVKVMDRESNVRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI F+GLDR+ V EA +GDI+ TG++E+ I TICDP+ L L +DEPT+
Sbjct: 249 -GRVLQILGFRGLDRMEVPEARAGDIIAFTGMDELYISDTICDPAAVEPLKALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AGR+GK++T+R ++ RL E+K+N+ LRV + D + VSGRGELHL
Sbjct: 308 SMTFQVNTSPFAGRDGKYVTSRNLRERLMEELKHNVALRVEETDDPDK-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL VSRP VI +T +G EPYE + VD+EE +QG IM+KL R G+L
Sbjct: 367 SILIENMRREGYELGVSRPEVIVRTRDGVKEEPYEMVTVDVEEQHQGGIMEKLGSRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVRL+YR+PSRGLIGFQ EF+T T GTG++ HVF+ Y F + + R
Sbjct: 427 LDMIPDGKGRVRLDYRVPSRGLIGFQTEFLTATSGTGILHHVFDSYGEFRAGA---VAPR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ ++L+ LQ+RGR+FI + VYEGM+IGIH+RDNDL+VNP+K KQL
Sbjct: 484 NNGVLIANGNGKALGFALFNLQERGRMFIGPGEEVYEGMVIGIHTRDNDLVVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L P++++LE A+EFI DDELVE+TPK IR+RK+ L E+ERK+
Sbjct: 544 TNIRAAGSDENIILTPPLRLSLEQALEFIEDDELVEVTPKAIRVRKKLLLEHERKR 599
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQHSGTLDARAQVVERMMDSNALEKERGITILAKNTALEWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A A G IV +
Sbjct: 68 YRINVVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTAKAFAMGFRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|74316715|ref|YP_314455.1| translation initiation factor IF-2 [Thiobacillus denitrificans ATCC
25259]
gi|90101386|sp|Q3SKX1.1|IF2_THIDA RecName: Full=Translation initiation factor IF-2
gi|74056210|gb|AAZ96650.1| initiation factor 2 [Thiobacillus denitrificans ATCC 25259]
Length = 922
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/539 (61%), Positives = 437/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMKLG MVTINQVLDQETA+I+VEEMGH+ + L+ PE+FL+ E +
Sbjct: 357 MSVKAAEVIKALMKLGSMVTINQVLDQETAIIVVEEMGHIGKPAALDTPEAFLI-ETGEP 415
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE + R P+VT+MGHVDHGKTSLLD IR+T V EAGGITQHIGAY+V T G ITF
Sbjct: 416 GEAEMVARPPVVTVMGHVDHGKTSLLDTIRRTRVASGEAGGITQHIGAYHVETEKGVITF 475
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT EAI HAK +GVPL+VA+NKIDK
Sbjct: 476 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIHHAKAAGVPLVVAVNKIDK 535
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +RI+Q+L+++ V PEE+GG + F+ +SAK IN LL+ I LQAE+LEL+AP
Sbjct: 536 PDANPERIRQELVAQGVTPEEWGGDTQFVEVSAKANTNINGLLDAILLQAEVLELQAPAD 595
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE+RLDKGKGPVAT+L+QSGTLR D+V+AG YGR+R+ML+E GK + EAGP
Sbjct: 596 GPAKGIVIEARLDKGKGPVATLLVQSGTLRRGDMVLAGQVYGRVRAMLDEAGKTVTEAGP 655
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +GE++ V+ +E+KAREI LFRQGK+RDV+L+K++ K E+MF+ +
Sbjct: 656 SIPVEIQGLSDVPQAGEDMMVLPDERKAREIALFRQGKYRDVQLAKKQAAKLESMFDQMG 715
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V++L II+K D+ GS E L +L +STD+VK+ +IH+ VG I ESD+NLA+ASKA+
Sbjct: 716 QGEVQHLPIILKADMQGSYEGLAHALGKISTDEVKVNIIHSGVGAITESDVNLALASKAV 775
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADAS RKLA+ + ++IRY+NIIY + E+K+ ++ ++ EKKE+++G E+RQ
Sbjct: 776 LIGFNVRADASARKLAESSGVDIRYYNIIYEAVDEVKAALSGMLAPEKKESVIGTVEVRQ 835
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V +++KV IAGCY+ +G+++R + +R++RN +I GELDSLKRFKD+VKEVKA FEC
Sbjct: 836 VFVISKVGTIAGCYVTDGVVKRGAGVRLIRNNVVIHQGELDSLKRFKDDVKEVKANFEC 894
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D + R + I I + +E E+G+ F
Sbjct: 429 VMGHVDHGKTSLLDTIRRTRVASGEAGGITQHI-GAYHVETEKGVITF------------ 475
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 476 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIHHAKAAGVPLVVAVNK 532
Query: 1047 IDRSNARPEWV 1057
ID+ +A PE +
Sbjct: 533 IDKPDANPERI 543
>gi|21241769|ref|NP_641351.1| GTP-binding elongation factor protein [Xanthomonas axonopodis pv.
citri str. 306]
gi|21107142|gb|AAM35887.1| GTP-binding elongation factor protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 609
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/600 (57%), Positives = 454/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT+EQLDFP++YTSAL+GYA+ +S R+G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATDEQLDFPIVYTSALNGYASLDSDVREGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q++I L+Y++++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMQHVSAPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMPVSVID-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ + A +GDIV I+GI+E+ I T+C P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFLGLERIEQDTAEAGDIVAISGIQELTISDTVCALDHPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T RQ+++RLD E +N+ L+V + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTNRQLRDRLDREKVHNVALKVEEGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+L EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGKLMEPIEQLVVDIEEQHQGGVMEKLGTR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ G AY+L L++RGRLF D VYEG ++GIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAPGATPAYALGPLEERGRLFAAEGDNVYEGQLVGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L IK TLE A++FI DDELVE+TPK IRLRK+FL E++RK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKFLTESDRKR 604
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVTNHG 116
+ I+ HVDHGKT+L+D + K + SE + + + N +T G
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQG 68
Query: 117 S-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ I +DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|194364566|ref|YP_002027176.1| GTP-binding protein TypA [Stenotrophomonas maltophilia R551-3]
gi|194347370|gb|ACF50493.1| GTP-binding protein TypA [Stenotrophomonas maltophilia R551-3]
Length = 615
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/606 (57%), Positives = 448/606 (73%), Gaps = 15/606 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG- 984
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWEDK 69
Query: 985 -----TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFK
Sbjct: 70 KTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFK 129
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVVVNK+DR +RPEWV+D FDLFDKL AT EQLDFP++Y SAL+GYA R G+
Sbjct: 130 PIVVVNKVDRPGSRPEWVIDQVFDLFDKLGATNEQLDFPIVYASALNGYAGLEDTVRDGD 189
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PL+EAI+++ P + + P Q++I L+Y++++G IGIGRI G +K V +++
Sbjct: 190 MTPLYEAIMQHAPKPEVDPEGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMQVAVIDR 249
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
K N K+ Q+ F GL+R+ + A +GDIV I+GI+E+ I T+C P P LP L
Sbjct: 250 EGKKRN-GKVLQVLGFLGLERIEQDSAEAGDIVAISGIQELTISDTLCAPDTPEALPALT 308
Query: 1220 IDEPTLTINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
+DEPT+++ F VNNSP AG + GKF+T+RQIK+RLD E +N+ L+V Q + D +
Sbjct: 309 VDEPTISMTFQVNNSPFAGNKDLSGGKFLTSRQIKDRLDREKVHNVALKVEQLEDADK-F 367
Query: 1276 EVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIM 1335
VSGRGELHL++LIENMRREGYEL+VSRP VI K ++G+ EP E L VDIEEI+QG +M
Sbjct: 368 LVSGRGELHLSVLIENMRREGYELAVSRPEVIIKQIDGQAMEPIEQLVVDIEEIHQGGVM 427
Query: 1336 QKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFY 1395
+KL R G LKN+E + K RVRLEY+IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P
Sbjct: 428 EKLGTRKGQLKNMESDGKGRVRLEYQIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGP-- 485
Query: 1396 NKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDL 1455
K + + KR NGV+I+ G AYSL LQ+RG+LF D VYEG ++GIHS+DNDL
Sbjct: 486 -KEQGAIAKRINGVMIANAPGATPAYSLGPLQERGKLFAAEGDNVYEGQLVGIHSKDNDL 544
Query: 1456 LVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLK 1515
VN IK K LTN+R+SG D+AIQL IK +LE A++FI DDELVEITPK IRLRK+FL
Sbjct: 545 TVNAIKTKPLTNMRASGKDDAIQLTPAIKYSLEQALDFIEDDELVEITPKEIRLRKKFLT 604
Query: 1516 ENERKK 1521
E++RKK
Sbjct: 605 ESDRKK 610
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + + N ++ + +IT+
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWED 68
Query: 121 -----------LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
+DTPGH F R + D V+++V A DG MPQTR A G
Sbjct: 69 KKTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGF 128
Query: 170 PLIVAINKIDK 180
IV +NK+D+
Sbjct: 129 KPIVVVNKVDR 139
>gi|289664240|ref|ZP_06485821.1| GTP-binding protein TypA [Xanthomonas campestris pv. vasculorum NCPPB
702]
gi|289669377|ref|ZP_06490452.1| GTP-binding protein TypA [Xanthomonas campestris pv. musacearum NCPPB
4381]
Length = 609
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/600 (57%), Positives = 454/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWNGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT+EQLDFP++YTSAL+GYA+ +S R G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATDEQLDFPIVYTSALNGYASLDSNVRDGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q++I L+Y++++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMQHVSAPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGVLKKNMPVSVID-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ + A +GDIV I+G+ E+ I T+C P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFLGLERIEQDTAEAGDIVAISGVTELTISDTVCALDHPESLPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+++RLD E +N+ L+V + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLRDRLDREKVHNVALKVEEGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+L EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGKLMEPIEQLVVDIEEQHQGGVMEKLGTR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ G AY+L L++RGRLF D VYEG +IGIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAPGATPAYALGPLEERGRLFAAEGDNVYEGQLIGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L IK TLE A++FI DDELVE+TPK IRLRK+FL E++RK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKFLTESDRKR 604
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + SE + + + N + N
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWNG 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|351728289|ref|ZP_08945980.1| translation initiation factor IF-2 [Acidovorax radicis N35]
Length = 957
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/539 (61%), Positives = 436/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K++ VIK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F +E +
Sbjct: 392 MSIKANEVIKALMKMGQMVTINQPLDQDTAMIMVEEMGHKAVVAALDDPEAFT-DEDSGQ 450
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ++F
Sbjct: 451 KDVELLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGMVSF 510
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 511 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAITKADK 570
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+L+ EQV+PEEYGG SPF+ +S+KTG+GI+ LLE + LQAE+LELKAPV
Sbjct: 571 PDANFERVKQELVVEQVVPEEYGGDSPFVPVSSKTGMGIDTLLEQVLLQAEVLELKAPVD 630
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+ AKG++IE++LDKG+GPVATVL+Q+GTL+ DIV+AG +YGR+R+ML+ENGK AGP
Sbjct: 631 SLAKGLVIEAQLDKGRGPVATVLVQAGTLKVGDIVLAGQTYGRVRAMLDENGKVAKTAGP 690
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF D+
Sbjct: 691 SIPVEIQGLTEVPQAGDEFMVLTDERRAREIATYRAGKFRNTKLAKQQAAKLENMFADMT 750
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L II+K DV GS+E L +SL LSTD+VK+Q+++ AVG I+ESDINLAIASKAI
Sbjct: 751 AGEVKTLPIIVKADVQGSQEALAQSLLKLSTDEVKVQLVYAAVGAISESDINLAIASKAI 810
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ N +++ Y++IIY+ + E++ ++ ++ E++E ++G AEIR
Sbjct: 811 VIGFNVRADAGARKLAEGNGVDLHYYSIIYDAVDELRVAMSGMLAPEQREEIIGTAEIRT 870
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + K+ IAG YI G++ R+++ R+LR+ +++TGE+DS+KR KD+VK+VK GFEC
Sbjct: 871 VFVATKIGTIAGSYITSGMVHRNARFRLLRDNVVVYTGEVDSIKRLKDDVKDVKEGFEC 929
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 464 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGMVSF------------ 510
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A G +V + K
Sbjct: 511 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAITK 567
Query: 1047 IDRSNARPEWV 1057
D+ +A E V
Sbjct: 568 ADKPDANFERV 578
>gi|430759714|ref|YP_007215571.1| GTP-binding protein TypA/BipA [Thioalkalivibrio nitratireducens DSM
14787]
gi|430009338|gb|AGA32090.1| GTP-binding protein TypA/BipA [Thioalkalivibrio nitratireducens DSM
14787]
Length = 605
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/596 (59%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT R+MDSN IEKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTLDARTEQGERVMDSNAIEKERGITILAKNTAIRWQDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA +GFKPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAMGFKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD+L AT+EQLDFPV+Y SAL GYA R G+M LFE
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDRLGATDEQLDFPVVYASALQGYAGLEPDVRAGDMNCLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ VP + P Q+Q+ SL+Y+SY G IGIGRI GRI+S V +++ N
Sbjct: 189 TIVERVPPPDVDEAGPFQMQVSSLDYNSYQGLIGIGRIRRGRIRSNSPVKVVDRAGHVRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI F GL R+ V EA +GDI+ TG++E+ I T+CDP+ GLP L +DEPT+
Sbjct: 249 -GRVLQIMGFHGLQRIEVAEAAAGDIITFTGMDELYISDTLCDPACAEGLPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AGREGK++T+R +++RL E+K+N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNTSPFAGREGKYVTSRVLRDRLLEELKHNVALRVEETDDADR-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL VSRP V+ + + GE+ EPYE + +DIEE +QG +M+ L R G+L
Sbjct: 367 GILIENMRREGYELGVSRPEVVLREIEGEICEPYERVAIDIEEAHQGAVMEALGTRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y +PSRGLIGFQ EF+T T GTG++ HVFE Y P+ + +G R
Sbjct: 427 QDMVPDGKGRVRLDYVMPSRGLIGFQTEFLTTTSGTGILHHVFEHYGPYRAGA---IGAR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ Y+L+ LQDRGRLFI + VYEGM+IGIHSRDNDL+VNP+K KQL
Sbjct: 484 NNGVLIANGAGKALGYALFNLQDRGRLFIGPGEEVYEGMVIGIHSRDNDLVVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SGSDE I L PI++TLE AIEFI++DELVE+TP+NIR+RK+FL E+ERK+
Sbjct: 544 TNIRASGSDENILLTPPIRMTLEQAIEFIDEDELVEVTPENIRIRKKFLLEHERKR 599
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTLDARTEQGERVMDSNAIEKERGITILAKNTAIRWQD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAMGFKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|77747776|ref|NP_636312.2| GTP-binding elongation factor protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|77761284|ref|YP_244373.2| GTP-binding elongation factor protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|188992823|ref|YP_001904833.1| GTP-binding elongation factor protein [Xanthomonas campestris pv.
campestris str. B100]
gi|384426792|ref|YP_005636149.1| GTP-binding protein TypA [Xanthomonas campestris pv. raphani 756C]
gi|167734583|emb|CAP52793.1| GTP-binding elongation factor protein [Xanthomonas campestris pv.
campestris]
gi|341935892|gb|AEL06031.1| GTP-binding protein TypA [Xanthomonas campestris pv. raphani 756C]
Length = 609
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/600 (57%), Positives = 454/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWNGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT+EQLDFP++YTSAL+GYA+ +S R G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATDEQLDFPIVYTSALNGYASLDSNVRDGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q++I L+Y++++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMQHVSAPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGVLKKNMPVSVID-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ + A +GDIV I+G+ E+ I T+C P GLP L +DEPT+
Sbjct: 249 QGKVLQVLGFLGLERIEQDTAEAGDIVAISGVAELTISDTVCALDAPEGLPPLTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+++RLD E +N+ L+V + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLRDRLDREKVHNVALKVEEGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+ EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGKQMEPIEQLVVDIEEQHQGGVMEKLGTR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ G AY+L L++RGRLF D VYEG +IGIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAPGATPAYALGPLEERGRLFAAEGDNVYEGQLIGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L IK TLE A++FI DDELVE+TPK IRLRK+FL E++RK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKFLTESDRKR 604
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + SE + + + N + N
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWNG 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|438000059|ref|YP_007183792.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451812989|ref|YP_007449442.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339293|gb|AFZ83715.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451778958|gb|AGF49838.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 945
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/540 (62%), Positives = 451/540 (83%), Gaps = 3/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K++ VIKNLMKLGQMVTINQVLDQETAMI+VEE GH A AS+++DPE FL + +
Sbjct: 380 MSIKAAEVIKNLMKLGQMVTINQVLDQETAMIVVEEFGHTAIASRIDDPEIFL--DISSV 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A+S+ RAPIVT+MGHVDHGKTSLLDYIR+T V SEAGGITQHIGAYNV T+ GSITF
Sbjct: 438 SNADSIQRAPIVTVMGHVDHGKTSLLDYIRRTKVTSSEAGGITQHIGAYNVRTDIGSITF 497
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAF +MRARGA++TDIVVLVVA+DDGVMPQTREAI H K + VP+IVA+ K DK
Sbjct: 498 LDTPGHEAFASMRARGARLTDIVVLVVASDDGVMPQTREAINHVKHANVPVIVALTKADK 557
Query: 181 LD-INLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
NLD++KQ+LI+E++IPEEYGG+ PFI +SAKTG GI+ LL+NI LQ+++LELKA V
Sbjct: 558 SSSANLDKVKQELITEEIIPEEYGGSVPFIPVSAKTGDGIDILLDNIILQSDVLELKAQV 617
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
+PAKG++IE+ LDKG+GP+ATVL+QSGTL+ DIV+ GA++GRIRSML+ENG +I +AG
Sbjct: 618 DSPAKGIVIEASLDKGRGPIATVLVQSGTLKKGDIVLVGATFGRIRSMLDENGNSIEKAG 677
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PSIPVEI GLT VP + + L V+ +E+KAREI LFRQGKFRD KL++++ K E++F++I
Sbjct: 678 PSIPVEIHGLTDVPSAADFLVVLSDERKAREIALFRQGKFRDSKLARKQSDKMESIFDNI 737
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
V+ L II+K+DV GS+E ++ SL LS ++V I++IH AVG I+++D+NLAIAS A
Sbjct: 738 TDSSVQVLSIIVKSDVQGSQEAISSSLLKLSNNEVCIKIIHAAVGGISDNDVNLAIASNA 797
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
+IIGFNVRAD+ +K A++NNINIRY++IIY+ I +IK ++ ++ EKKE ++GL E+R
Sbjct: 798 VIIGFNVRADSIAKKNAELNNINIRYYSIIYDAINDIKQAVSGMLIPEKKEEVIGLVEVR 857
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+V ++K+ K+AGC +L+G++R+DS++R++RN + WTG++DSLKRFKD+VKEV++GF+C
Sbjct: 858 EVYSISKIGKVAGCMVLDGIVRKDSRVRLIRNNVVTWTGQIDSLKRFKDDVKEVRSGFDC 917
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 63/147 (42%), Gaps = 23/147 (15%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R T + GIT ++ +
Sbjct: 451 VMGHVDHGKTSLLDYIRRTKVTS----------------SEAGGITQHIGAYNVRTDIGS 494
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGH F R + D V+L++ + +G MPQTR IV + K
Sbjct: 495 ITFLDTPGHEAFASMRARGARLTDIVVLVVASDDGVMPQTREAINHVKHANVPVIVALTK 554
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEE 1073
D+S++ A D + TEE
Sbjct: 555 ADKSSS-------ANLDKVKQELITEE 574
>gi|386084570|ref|YP_006000852.1| GTP-binding protein TypA [Xylella fastidiosa subsp. fastidiosa GB514]
gi|307579517|gb|ADN63486.1| GTP-binding protein TypA [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 776
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/593 (57%), Positives = 453/593 (76%), Gaps = 9/593 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGTF + + R+MDSN+ EKERGITI +KN +I++NG
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTFSERAQVGERVMDSNDQEKERGITILAKNTAIKWNGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA+ S AR G+M PL+E
Sbjct: 130 KIDRPGARPDWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYASLESSARAGDMNPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + + P Q++I L+Y+SY+G IGIGRI G++ + V +++ +K N
Sbjct: 190 AIMQHVQPPQVDLHGPFQMRISQLDYNSYVGLIGIGRIQRGKVSTNMPVTVIDRMGNKHN 249
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ F GL+R V EA +GDIV I+GIE + I T+ DP+ P+ LP L++DEPT+
Sbjct: 250 -GKVLQVLGFLGLERHEVEEAQAGDIVAISGIESLSISDTLTDPTAPDALPALSVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG++ GKF+T+RQI+ RL E +N+ LRV ++ D ++VSGRG
Sbjct: 309 SMTFQVNNSPFAGQKEYSGGKFLTSRQIRERLARETLHNVALRV-EDTEDPDRFKVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIE MRREGYEL VSRP VI K ++G L EPYE L VD+EE +QG ++++L R
Sbjct: 368 ELHLSVLIETMRREGYELGVSRPEVIIKEIDGILQEPYEQLVVDVEEEHQGGVIERLGTR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
L N+E++ K RVRL+Y IP+RGLIGFQ EF T+T G+GL+ H+F+ Y P K+
Sbjct: 428 KAQLSNMELDGKGRVRLDYIIPARGLIGFQTEFKTITSGSGLLFHIFDHYGP---KADGP 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+IS GKA Y+L LQ+RGRL I+ + +YEGM++GIHS+DNDL VN ++
Sbjct: 485 IAKRINGVMISNGHGKAPGYALMGLQERGRLLIDAGEDIYEGMLVGIHSKDNDLTVNALR 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFL 1514
EKQLTNIR+SG D+AI L PIK++LE A+EFI DDELVE+TPK IRLRK L
Sbjct: 545 EKQLTNIRASGKDDAISLTPPIKMSLEQALEFIEDDELVEVTPKAIRLRKNIL 597
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + FSE + + + N + N
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTFSERAQVGERVMDSNDQEKERGITILAKNTAIKWNG 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 129 NKIDR-----PGARPDWVVEQV 145
>gi|19744117|emb|CAC93615.1| putative translation elongation factor G [Stenotrophomonas
maltophilia]
Length = 631
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/606 (57%), Positives = 447/606 (73%), Gaps = 15/606 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG- 984
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +
Sbjct: 26 AIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWEDK 85
Query: 985 -----TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFK
Sbjct: 86 KTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFK 145
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVVVNK+DR ARPEWV+D FDLFDKL AT EQLDFP++Y S L+GYA R G+
Sbjct: 146 PIVVVNKVDRPGARPEWVIDQVFDLFDKLGATNEQLDFPIVYASGLNGYAGLEDTVRDGD 205
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PL+EAI+++ P + + P Q++I L+Y++++G IGIGRI G +K V +++
Sbjct: 206 MTPLYEAIMQHAPRPEVDPEGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMQVAVIDR 265
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
K N K+ Q+ F GL+R+ + A +GDIV I+GI+E+ I TIC P P LP L
Sbjct: 266 EGKKRN-GKVLQVLGFMGLERIEQDTAEAGDIVAISGIQELTISDTICAPDTPEALPALT 324
Query: 1220 IDEPTLTINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
+DEPT+++ F VNNSP AG + GKF+T+RQIK+RLD E +N+ L+V Q + D +
Sbjct: 325 VDEPTISMTFQVNNSPFAGNKDLSGGKFLTSRQIKDRLDREKVHNVALKVEQLEDADK-F 383
Query: 1276 EVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIM 1335
VSGRGELHL++LIENMRREGYEL+VSRP VI K ++G++ EP E L VDIEEI+QG +M
Sbjct: 384 LVSGRGELHLSVLIENMRREGYELAVSRPEVIIKEIDGQMMEPIEQLVVDIEEIHQGGVM 443
Query: 1336 QKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFY 1395
+KL R G LKN+E + K RVRLEY IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P
Sbjct: 444 EKLGTRKGQLKNMESDGKGRVRLEYSIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGP-- 501
Query: 1396 NKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDL 1455
K + + KR NGV+I+ G AYSL LQ+RG+LF D VYEG ++GIHS+DNDL
Sbjct: 502 -KEQGAIAKRINGVMIANAPGTTPAYSLGPLQERGKLFAAEGDNVYEGQLVGIHSKDNDL 560
Query: 1456 LVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLK 1515
VN IK K LTN+R+SG D+AIQL IK +LE A++FI DDELVEITPK IRLRK+FL
Sbjct: 561 TVNAIKTKPLTNMRASGKDDAIQLTPAIKYSLEQALDFIEDDELVEITPKEIRLRKKFLT 620
Query: 1516 ENERKK 1521
E++RKK
Sbjct: 621 ESDRKK 626
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + + N ++ + +IT+
Sbjct: 25 IAIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWED 84
Query: 121 -----------LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
+DTPGH F R + D V+++V A DG MPQTR A G
Sbjct: 85 KKTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGF 144
Query: 170 PLIVAINKIDK 180
IV +NK+D+
Sbjct: 145 KPIVVVNKVDR 155
>gi|82702985|ref|YP_412551.1| translation initiation factor IF-2 [Nitrosospira multiformis ATCC
25196]
gi|123768184|sp|Q2Y7W2.1|IF2_NITMU RecName: Full=Translation initiation factor IF-2
gi|82411050|gb|ABB75159.1| bacterial translation initiation factor 2 (bIF-2) [Nitrosospira
multiformis ATCC 25196]
Length = 876
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/539 (61%), Positives = 435/539 (80%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K++ VIK LMK+G MVTINQ+LDQETAMI+VEE+GHVA + L+ PESFL +
Sbjct: 312 MSIKAAEVIKALMKMGNMVTINQMLDQETAMIVVEELGHVAKYAALDSPESFLADTEIAP 371
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G +TF
Sbjct: 372 SELKMEARAPVVTVMGHVDHGKTSLLDYIRRTRVASGEAGGITQHIGAYHVETERGMVTF 431
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAKVTD+V+LVVAADDGVMPQT EAI HAK VP++VA+ KIDK
Sbjct: 432 LDTPGHEAFTAMRARGAKVTDLVILVVAADDGVMPQTVEAIHHAKAGKVPIVVAMTKIDK 491
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +RI+Q+L++++V+PE++GG + F+ +SAKTG GI+ LLE++ LQAE+LELKAP
Sbjct: 492 PEANPERIRQELVTQEVVPEDWGGETMFVEVSAKTGQGIDDLLESVLLQAEVLELKAPKD 551
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IESRLDKG+GPVAT+L+QSGTL+ DI++AGA+YGR+R+ML+E+GK + +AGP
Sbjct: 552 APAKGIVIESRLDKGRGPVATMLVQSGTLKRGDILLAGAAYGRVRAMLDESGKQVEQAGP 611
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GE + + +E+KAREI LFRQGKFRDVKL+KQ+ K EN+F
Sbjct: 612 SIPVEIQGLSEVPVAGESVVALTDERKAREIALFRQGKFRDVKLAKQQAAKLENVFE--Q 669
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS E LT +L+ LSTD+VK+ +IH+ VG I ESDINLA+ASKA+
Sbjct: 670 RGEVKVLSLIIKADVQGSYEALTHALQQLSTDEVKVNIIHSGVGAITESDINLALASKAV 729
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN RADA RKL +++RY++IIY + EIK+ ++ ++ E+KEN+ GL EIR+
Sbjct: 730 VIGFNSRADAVARKLINSAGVDVRYYSIIYEAVDEIKAALSGMMAPERKENITGLLEIRE 789
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V ++KV +AGC + EG +RR S +R++RN +I TGELDSLKRFKD+VKEV+AGFEC
Sbjct: 790 VFRISKVGAVAGCLVQEGFVRRGSLVRVIRNGQVIHTGELDSLKRFKDDVKEVRAGFEC 848
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E ERG+ F
Sbjct: 385 VMGHVDHGKTSLLDYIRRTRVASGEAGGITQHI-GAYHVETERGMVTF------------ 431
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
+DTPGH F R + D V+L++ A +G MPQT A K G PIVV +
Sbjct: 432 ---LDTPGHEAFTAMRARGAKVTDLVILVVAADDGVMPQTVEAIHHA-KAGKVPIVVAMT 487
Query: 1046 KIDRSNARPEWV 1057
KID+ A PE +
Sbjct: 488 KIDKPEANPERI 499
>gi|372267799|ref|ZP_09503847.1| GTP-binding protein TypA/BipA [Alteromonas sp. S89]
Length = 602
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLDRRSADSERVMDSNDQEKERGITILAKNTAINWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA + G PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFEQGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFPVIY SAL+G A + +M PLF+
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDSLGATDEQLDFPVIYASALNGIAGTDETDMADDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V K + + P Q+QI +L+Y+SY+G IG+GRI G +K Q +V+++ +
Sbjct: 189 MIVDKVEPPKVDQDGPFQMQISALDYNSYVGVIGVGRITRGTLKPNQQIVVLD-REGNSR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAK+ Q+ + GL+RV V +A +GDIV ITG+ E+ I T+CDP P LP L +DEPT+
Sbjct: 248 KAKVLQVMGYLGLERVEVEQASAGDIVCITGVGELNISDTLCDPEHPETLPALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG++GK++T+R IK RLD E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGQDGKYVTSRNIKERLDQELIHNVALRVEQGDSPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE+MRREG+EL VSRP V+ K ++GE+ EPYE + +D+E+ +QG IM++L R +L
Sbjct: 367 SVLIESMRREGFELGVSRPEVVQKIVDGEVQEPYEQVVIDVEDQHQGSIMEELGLRKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K RVRL + +PSRG+IGF+N+F+TLT G+G+++ +F+ Y P + D+ R
Sbjct: 427 TNMEPDGKGRVRLTFVVPSRGMIGFRNQFLTLTSGSGIMTSIFDHYGPV---KEGDVTSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S GK +AY+L+ LQDRGRLF+ H + +YEG I+G+HSRDNDL+VNP K KQL
Sbjct: 484 INGVLVSMVKGKTLAYALYALQDRGRLFLGHGEEIYEGQIVGLHSRDNDLVVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R++G+DEA+ L P++ TLE A+EFI DDEL E+TP +IRLRK+ L+EN RK+
Sbjct: 544 TNVRAAGTDEALTLTPPVRHTLEQALEFIEDDELCEVTPNHIRLRKKILQENMRKR 599
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + ++ + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLDRRSADSERVMDSNDQEKERGITILAKNTAINWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFEQGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|167622295|ref|YP_001672589.1| GTP-binding protein TypA [Shewanella halifaxensis HAW-EB4]
gi|167352317|gb|ABZ74930.1| GTP-binding protein TypA [Shewanella halifaxensis HAW-EB4]
Length = 603
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLAQSGTLESRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLFE
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDETSADMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI ++Y+SY+G IGIGRI G +K+ Q V I+ G D K
Sbjct: 189 TIVEKVSSPDADAEGDFQMQISQIDYNSYVGVIGIGRIKRGSVKTNQQVTII-GADGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+R V +A +GDIV ITG+ ++ I T+C + LP L++DEPTL
Sbjct: 248 NGKVGQVLGYMGLERHEVADATAGDIVAITGLGQLLISDTVCATTNVEALPPLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++GE+ EP+E L VD+EE +QG +++KL R GD+
Sbjct: 367 SILIENMRREGYELAVSRPEVIVKEIDGEMCEPFETLTVDVEEQHQGAVIEKLGIRKGDM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 427 KDMQLDGKGRVRIDFVIPSRGLIGFQTEFMTATSGTGLIYHSFDHYGPLKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS +GKA+ ++L+ LQ+RGRLFI H VYEG ++G+H+R NDL VN +K KQL
Sbjct: 484 ARGVLISNATGKALTFALFGLQERGRLFITHASEVYEGQVVGLHARANDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L I++TLE A+EFI+DDELVE+TP NIR+RKRFL ENERK+
Sbjct: 544 TNMRASGTDEAQVLTPHIEMTLEQALEFIDDDELVEVTPLNIRVRKRFLTENERKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLAQSGTLESRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|157963726|ref|YP_001503760.1| GTP-binding protein TypA [Shewanella pealeana ATCC 700345]
gi|157848726|gb|ABV89225.1| GTP-binding protein TypA [Shewanella pealeana ATCC 700345]
Length = 609
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 15 AIIAHVDHGKTTLVDKLLAQSGTLESRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLFE
Sbjct: 135 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDEVSADMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI ++Y+SY+G IGIGRI G +K+ Q V I+ G D K
Sbjct: 195 TIVEKVSSPDADAEGDFQMQISQIDYNSYVGVIGIGRIKRGSVKTNQQVTIL-GADGKKR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI Q+ + GL+R V++A +GDIV ITG+ ++ I T+C + LP L++DEPTL
Sbjct: 254 NGKIGQVLGYMGLERHEVSDATAGDIVAITGLGQLLISDTVCATTNVEALPPLSVDEPTL 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++GE+ EP+E L VD++E +QG +++KL R GD+
Sbjct: 373 SILIENMRREGYELAVSRPEVIVKEIDGEMCEPFETLTVDVQEEHQGAVIEKLGIRKGDM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 433 KDMQLDGKGRVRIDFVIPSRGLIGFQTEFMTATSGTGLIYHSFDHYGPLKGG---DIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS +GKA+ ++L+ LQ+RGRLFI H VYEG ++G+H+R NDL VN +K KQL
Sbjct: 490 ARGVLISNATGKALTFALFGLQERGRLFITHATEVYEGQVVGLHARANDLTVNCLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L I++TLE A+EFI+DDELVE+TP NIR+RKRFL ENERK+
Sbjct: 550 TNMRASGTDEAQVLTPHIEMTLEQALEFIDDDELVEVTPLNIRVRKRFLTENERKR 605
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + G T+ + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLAQSGTLESRGEATERVMDSNDLEKERGITILAKNTAIKWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 133
Query: 176 NKIDK 180
NKID+
Sbjct: 134 NKIDR 138
>gi|408823529|ref|ZP_11208419.1| GTP-binding protein [Pseudomonas geniculata N1]
Length = 615
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/606 (57%), Positives = 447/606 (73%), Gaps = 15/606 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG- 984
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWEDK 69
Query: 985 -----TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFK
Sbjct: 70 KTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFK 129
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVVVNK+DR ARPEWV+D FDLFDKL AT EQLDFP++Y S L+GYA R G+
Sbjct: 130 PIVVVNKVDRPGARPEWVIDQVFDLFDKLGATNEQLDFPIVYASGLNGYAGLEDTVRDGD 189
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PL+EAI+++ P + + P Q++I L+Y++++G IGIGRI G +K V +++
Sbjct: 190 MTPLYEAIMQHAPRPEVDPEGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMQVAVIDR 249
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
K N K+ Q+ F GL+R+ + A +GDIV I+GI+E+ I TIC P P LP L
Sbjct: 250 EGKKRN-GKVLQVLGFMGLERIEQDSAEAGDIVAISGIQELTISDTICAPDFPEALPALT 308
Query: 1220 IDEPTLTINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
+DEPT+++ F VNNSP AG + GKF+T+RQIK+RLD E +N+ L+V Q + D +
Sbjct: 309 VDEPTISMTFQVNNSPFAGNKDLSGGKFLTSRQIKDRLDREKVHNVALKVEQLEDADK-F 367
Query: 1276 EVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIM 1335
VSGRGELHL++LIENMRREGYEL+VSRP VI K ++G++ EP E L VDIEEI+QG +M
Sbjct: 368 LVSGRGELHLSVLIENMRREGYELAVSRPEVIIKEIDGQMMEPIEQLVVDIEEIHQGGVM 427
Query: 1336 QKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFY 1395
+KL R G LKN+E + K RVRLEY IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P
Sbjct: 428 EKLGTRKGQLKNMESDGKGRVRLEYSIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGP-- 485
Query: 1396 NKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDL 1455
K + + KR NGV+I+ G AYSL LQ+RG+LF D VYEG ++GIHS+DNDL
Sbjct: 486 -KEQGAIAKRINGVMIANAPGTTPAYSLGPLQERGKLFAAEGDNVYEGQLVGIHSKDNDL 544
Query: 1456 LVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLK 1515
VN IK K LTN+R+SG D+AIQL IK +LE A++FI DDELVEITPK IRLRK+FL
Sbjct: 545 TVNAIKTKPLTNMRASGKDDAIQLTPAIKYSLEQALDFIEDDELVEITPKEIRLRKKFLT 604
Query: 1516 ENERKK 1521
E++RKK
Sbjct: 605 ESDRKK 610
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + + N ++ + +IT+
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWED 68
Query: 121 -----------LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
+DTPGH F R + D V+++V A DG MPQTR A G
Sbjct: 69 KKTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGF 128
Query: 170 PLIVAINKIDK 180
IV +NK+D+
Sbjct: 129 KPIVVVNKVDR 139
>gi|58580596|ref|YP_199612.1| GTP-binding elongation factor protein [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|84622545|ref|YP_449917.1| GTP-binding elongation factor protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188578436|ref|YP_001915365.1| GTP-binding protein TypA [Xanthomonas oryzae pv. oryzae PXO99A]
gi|384418075|ref|YP_005627435.1| GTP-binding protein TypA [Xanthomonas oryzae pv. oryzicola BLS256]
gi|58425190|gb|AAW74227.1| GTP-binding elongation factor protein [Xanthomonas oryzae pv. oryzae
KACC 10331]
gi|84366485|dbj|BAE67643.1| GTP-binding elongation factor protein [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188522888|gb|ACD60833.1| GTP-binding protein TypA [Xanthomonas oryzae pv. oryzae PXO99A]
gi|353460989|gb|AEQ95268.1| GTP-binding protein TypA [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 609
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/600 (57%), Positives = 454/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWNGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT+EQLDFP++YTSAL+GYA+ +S R G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATDEQLDFPIVYTSALNGYASLDSDVRDGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q++I L+Y++++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMQHVSAPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGVLKKNMPVSVID-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ + A +GDIV I+G+ E+ I T+C P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFLGLERIEQDTAEAGDIVAISGVAELTISDTVCALDAPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+++RL+ E +N+ L+V + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLRDRLEREKVHNVALKVEEGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+L EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGKLMEPIEQLVVDIEEQHQGGVMEKLGTR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ G AY+L L++RGRLF D VYEG +IGIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAPGATPAYALGPLEERGRLFAAEGDNVYEGQLIGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L IK TLE A++FI DDELVE+TPK IRLRK+FL E++RK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKFLTESDRKR 604
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + SE + + + N + N
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWNG 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|388569853|ref|ZP_10156237.1| translation initiation factor IF-2 [Hydrogenophaga sp. PBC]
gi|388262948|gb|EIK88554.1| translation initiation factor IF-2 [Hydrogenophaga sp. PBC]
Length = 953
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/539 (60%), Positives = 436/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVKSS +IK LMKLGQMVTINQ LDQ+TAMILVEE+GH A + L+DPE+F E ++
Sbjct: 388 MSVKSSELIKQLMKLGQMVTINQSLDQDTAMILVEELGHKAVVAALDDPEAFTDEEVSQQ 447
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G +TF
Sbjct: 448 -QAEALPRAPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVDTPRGMVTF 506
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LV AADDGVMPQT+EA+ HAK +GVP++VA+ K DK
Sbjct: 507 LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAVKHAKAAGVPIVVAMTKADK 566
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N++R+K +L++E+V+PEE+GG SPF+++SAKTG+GI+ LLE + LQAE+LELKAPV
Sbjct: 567 PEANIERVKSELVAEEVVPEEFGGESPFVAVSAKTGMGIDDLLEQVLLQAEVLELKAPVD 626
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE+RLDKG+G VATVL+QSGTL+ D+V+AG + GR+R+ML+ENGK EAGP
Sbjct: 627 AMAKGLVIEARLDKGRGAVATVLVQSGTLKVGDVVLAGQTSGRVRAMLDENGKATKEAGP 686
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL +VP +G+E V+ +E++AREI +R GK+R KL+KQ+ K ENMF+D+
Sbjct: 687 SIPVEIQGLAEVPQAGDEFMVMSDERRAREIATYRAGKYRSTKLAKQQAAKLENMFSDMA 746
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L II+K DV GS+E L SL LSTD+VK+Q+++ VG I+ESD+NLAIA+ A+
Sbjct: 747 AGEVKTLPIILKADVQGSQEALAASLLKLSTDEVKVQLVYAGVGGISESDVNLAIAAGAV 806
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ N +++RY+NIIY+ + ++K+ ++ ++ EK+E ++G+AEIR
Sbjct: 807 VIGFNVRADAGARKLAEGNEVDLRYYNIIYDAVDDLKAAMSGMLAPEKREEVIGMAEIRT 866
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AGC + +G + R++ R+LR+ ++ TGEL+SLKR KD+V+EVK GFEC
Sbjct: 867 VFVASKIGTVAGCMVTQGFVTRNAHYRLLRDNVVVQTGELESLKRLKDDVREVKEGFEC 925
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 460 VMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHI-GAYHVDTPRGMVTF------------ 506
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQT+ + A G +V + K
Sbjct: 507 ---LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAVKHAKAAGVPIVVAMTK 563
Query: 1047 IDRSNARPEWV 1057
D+ A E V
Sbjct: 564 ADKPEANIERV 574
>gi|392951523|ref|ZP_10317078.1| virulence regulator BipA [Hydrocarboniphaga effusa AP103]
gi|391860485|gb|EIT71013.1| virulence regulator BipA [Hydrocarboniphaga effusa AP103]
Length = 607
Score = 709 bits (1830), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/602 (56%), Positives = 450/602 (74%), Gaps = 10/602 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQS T +N+ R+MDSN++E+ERGITI SKN +I ++
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSQTLDARENLGERVMDSNDLERERGITILSKNTAIRWHDK 68
Query: 986 R------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
R INI+DTPGHADFGGEVER+LSMVD V LL+DA +GPMPQTRFVT+KA +G
Sbjct: 69 RSGVDYRINIVDTPGHADFGGEVERVLSMVDCVCLLVDAQDGPMPQTRFVTQKAFAMGLN 128
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVV+NK+DR ARP+WVVD FDLFDKL AT+ QLDFP++Y SAL+GYA + R+GN
Sbjct: 129 PIVVINKVDRPGARPDWVVDQVFDLFDKLGATDTQLDFPIVYASALNGYAGFDGSVREGN 188
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLF+ I+ V K +++ P Q+Q+ISL YSSY+G IG GRI G+IK+ V ++N
Sbjct: 189 MDPLFQTIVDKVAPPKVDADGPFQMQVISLAYSSYVGVIGTGRISRGKIKANSPVSVVN- 247
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+ + + ++ QI F GLD+V V EA +GDI+ +TGI E+ I TICDP KP LP L
Sbjct: 248 RNGEVRQGRVLQILGFMGLDKVEVPEAEAGDIIAVTGIAELGISETICDPKKPEALPTLT 307
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPT+++ F VN SP AG+EGKF+T+RQI +RL E++ N+ LRV D + VSG
Sbjct: 308 VDEPTMSMVFEVNKSPFAGKEGKFVTSRQIGDRLQKELQTNVALRVEPGDSPDQ-FRVSG 366
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RG LHL IL+ENMRREG+E++VSRP+VI K ++GE+ EPYE+L D+EE NQG +Q L
Sbjct: 367 RGLLHLGILLENMRREGFEIAVSRPQVILKEIDGEICEPYESLVADVEEANQGGTIQGLA 426
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
RGG + ++ ++ K RVRL Y IPSRGLIGFQ EF+++T GTGL+ H F+ + P + +
Sbjct: 427 ERGGKMLDMVVDGKGRVRLSYMIPSRGLIGFQTEFMSMTSGTGLLFHNFDHFGPKADNA- 485
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
D+G+R NGVLIS GK Y+L+ LQ+RGR+ ++ VYEG I+GIHSRDNDL+VN
Sbjct: 486 -DIGQRHNGVLISNEQGKTAPYALFNLQERGRMMVDPAVDVYEGQIVGIHSRDNDLVVNV 544
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
+K K+LTN+R+SGSDE + L P+K +LE A+EFIN+DELVE+TP +IR+RK+FLKE+ER
Sbjct: 545 LKGKKLTNMRASGSDENVILTPPVKHSLEQALEFINEDELVELTPTSIRIRKKFLKEHER 604
Query: 1520 KK 1521
K+
Sbjct: 605 KR 606
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSQTLDARENLGERVMDSNDLERERGITILSKNTAIRWHD 67
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V L+V A DG MPQTR A G+
Sbjct: 68 KRSGVDYRINIVDTPGHADFGGEVERVLSMVDCVCLLVDAQDGPMPQTRFVTQKAFAMGL 127
Query: 170 PLIVAINKIDK 180
IV INK+D+
Sbjct: 128 NPIVVINKVDR 138
>gi|254522824|ref|ZP_05134879.1| GTP-binding protein TypA/BipA [Stenotrophomonas sp. SKA14]
gi|219720415|gb|EED38940.1| GTP-binding protein TypA/BipA [Stenotrophomonas sp. SKA14]
Length = 615
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/606 (57%), Positives = 447/606 (73%), Gaps = 15/606 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG- 984
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWEDK 69
Query: 985 -----TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFK
Sbjct: 70 KTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFK 129
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVVVNK+DR +RPEWV+D FDLFDKL AT EQLDFP++Y SAL+GYA R G+
Sbjct: 130 PIVVVNKVDRPGSRPEWVIDQVFDLFDKLGATNEQLDFPIVYASALNGYAGLEDSVRDGD 189
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PL+EAI+++ P + + P Q++I L+Y++++G IGIGR+ G +K V +++
Sbjct: 190 MTPLYEAIMQHAPKPEVDPEGPFQMRISQLDYNNFVGVIGIGRVQRGTLKKNMQVAVIDR 249
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
K N K+ Q+ F GL+R+ + A +GDIV I+GI E+ I T+C P P LP L
Sbjct: 250 EGKKRN-GKVAQVLGFLGLERIEQDTAEAGDIVAISGIPELTISDTLCHPDTPEALPALT 308
Query: 1220 IDEPTLTINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
+DEPT+++ F VNNSP AG + GKF+T+RQIK+RLD E +N+ L+V Q + D +
Sbjct: 309 VDEPTISMTFQVNNSPFAGNKDLSGGKFLTSRQIKDRLDREKVHNVALKVEQLEDADK-F 367
Query: 1276 EVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIM 1335
VSGRGELHL++LIENMRREGYEL+VSRP VI K ++G++ EP E L VDIEE++QG +M
Sbjct: 368 LVSGRGELHLSVLIENMRREGYELAVSRPEVIIKEIDGQMMEPIEQLVVDIEEVHQGGVM 427
Query: 1336 QKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFY 1395
+KL R G LKN+E + K RVRLEY IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P
Sbjct: 428 EKLGTRKGQLKNMEPDGKGRVRLEYSIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGP-- 485
Query: 1396 NKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDL 1455
K + + KR NGV+I+ G AYSL LQ+RG+LF D VYEG ++GIHS+DNDL
Sbjct: 486 -KEQGAIAKRINGVMIANAPGTTPAYSLGPLQERGKLFAAEGDNVYEGQLVGIHSKDNDL 544
Query: 1456 LVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLK 1515
VN IK K LTN+R+SG D+AIQL IK +LE A++FI DDELVEITPK IRLRK+FL
Sbjct: 545 TVNAIKTKPLTNMRASGKDDAIQLTPAIKYSLEQALDFIEDDELVEITPKEIRLRKKFLT 604
Query: 1516 ENERKK 1521
E++RKK
Sbjct: 605 ESDRKK 610
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + + N ++ + +IT+
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWED 68
Query: 121 -----------LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
+DTPGH F R + D V+++V A DG MPQTR A G
Sbjct: 69 KKTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGF 128
Query: 170 PLIVAINKIDK 180
IV +NK+D+
Sbjct: 129 KPIVVVNKVDR 139
>gi|254787870|ref|YP_003075299.1| GTP-binding protein TypA/BipA [Teredinibacter turnerae T7901]
gi|237685690|gb|ACR12954.1| GTP-binding protein TypA/BipA [Teredinibacter turnerae T7901]
Length = 607
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + + RIMDSN+ E+ERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLKQSGTLDRKDESSERIMDSNDQERERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA + G PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD+L ATE+QLDFP++Y SAL+G A +M PLF+
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDRLGATEDQLDFPIVYASALNGIAGMEEDNLAEDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP P Q+QI +L+Y+SY+G IG+GRI G + Q VV+++ D K
Sbjct: 189 MIVDKVPHPPVEEAKPFQMQISALDYNSYVGVIGVGRITRGSLSPNQQVVVVD-KDGKQR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAK+ Q+ + GL RV ++A +GDIV ITGI+++ I T+CDP+ LP L +DEPT+
Sbjct: 248 KAKVLQVMGYHGLQRVDTDQASAGDIVCITGIDKLGISDTLCDPNAIEALPALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG EGKF+T+R IK+RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGLEGKFVTSRNIKDRLEQELIHNVALRVRQGDTADK-FVVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL VSRP VI + ++GE+ EP+EN+ +D+E+ +QG +M++L R ++
Sbjct: 367 SVLIETMRREGFELGVSRPEVIQREVDGEIQEPFENVVIDVEDQHQGSVMEELGLRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K RVRLE+ +PSRGLIGF+ F+TLT G+G+++ +F+ Y P D+ R
Sbjct: 427 TNMEPDGKGRVRLEFIVPSRGLIGFRGLFLTLTSGSGIMTSIFDHYGPV---KAGDVTSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GK +AY+L+ LQDRGRLF+ H + +YEG I+G+HSRDNDL+VNP K KQL
Sbjct: 484 QNGVLISMVKGKTLAYALFNLQDRGRLFLGHGEEIYEGQIVGLHSRDNDLVVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++G+DEA+ L P++ TLE A+EFI DDELVE+TP++IRLRK+ L EN+RK+
Sbjct: 544 TNIRAAGTDEALTLTPPVRHTLEQALEFIEDDELVEVTPESIRLRKKLLTENDRKR 599
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + ++ I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKQSGTLDRKDESSERIMDSNDQERERGITILAKNTAINWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|257094533|ref|YP_003168174.1| translation initiation factor IF-2 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047057|gb|ACV36245.1| translation initiation factor IF-2 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 943
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/542 (61%), Positives = 434/542 (80%), Gaps = 5/542 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFL---LNEY 57
M+VK++ VIK LMK+G MVTINQ LDQETAMI+VEEMGH A A+KL+DP++FL
Sbjct: 376 MAVKATEVIKALMKMGSMVTINQSLDQETAMIIVEEMGHKAFAAKLDDPDAFLDEAPGAD 435
Query: 58 NKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
K++ E RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T+ G
Sbjct: 436 QKDVALEP--RAPVVTVMGHVDHGKTSLLDYIRRTRVASGEAGGITQHIGAYHVETDRGV 493
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+TFLDTPGHEAFTAMRARGAK TD+V+LVVAADDGVMPQTREAI HAK +GVP+IVA+NK
Sbjct: 494 VTFLDTPGHEAFTAMRARGAKATDLVILVVAADDGVMPQTREAIHHAKAAGVPIIVAVNK 553
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
IDK +R+KQ+L+ E V+PEEYGG +PF+S+SAKTGVGI++LLEN+ LQA++LELKA
Sbjct: 554 IDKPGAQPERVKQELVVEDVVPEEYGGDAPFVSVSAKTGVGIDELLENVLLQADVLELKA 613
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILE 297
P A+G+IIE+RLD+G+GPVAT+L+ SGTL D+++AG +GR+R+ML+ENGK I E
Sbjct: 614 PREASARGLIIEARLDRGRGPVATMLVLSGTLHQGDVLLAGQVFGRVRAMLDENGKPIKE 673
Query: 298 AGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFN 357
AGPSIPVEI GL+ VP +G+E V+ +E+KAREI LFRQGK+RDVKL+ ++ EN+
Sbjct: 674 AGPSIPVEILGLSDVPAAGQEAVVLADERKAREIALFRQGKYRDVKLATKQAANLENLLE 733
Query: 358 DINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIAS 417
+ + + K L +IIK DV GS+E L +SL LST +VK+ VIH AVG I+ESD++LA AS
Sbjct: 734 QMTEAEAKVLALIIKADVQGSQEALVQSLLKLSTGEVKVNVIHAAVGAISESDVHLAQAS 793
Query: 418 KAIIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAE 477
KA+IIGFN RADA RK A+ ++IRY+NIIY+ + E+++ ++ ++ EK+E++ GL E
Sbjct: 794 KAVIIGFNTRADAGARKAAETAGVDIRYYNIIYDAVDEVRAALSGMLSPEKREDITGLVE 853
Query: 478 IRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGF 537
IRQV ++ IAGCY+LEG+I+R S+ R+LR ++W GE++SLKRFKD+VKEV++GF
Sbjct: 854 IRQVFHATRIGTIAGCYVLEGVIKRSSRARLLRQHIVVWDGEIESLKRFKDDVKEVRSGF 913
Query: 538 EC 539
EC
Sbjct: 914 EC 915
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+ F
Sbjct: 450 VMGHVDHGKTSLLDYIRRTRVASGEAGGITQHI-GAYHVETDRGVVTF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQTR A G IV VNK
Sbjct: 497 ---LDTPGHEAFTAMRARGAKATDLVILVVAADDGVMPQTREAIHHAKAAGVPIIVAVNK 553
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ A+PE V + + + E D P + SA G
Sbjct: 554 IDKPGAQPERVKQEL--VVEDVVPEEYGGDAPFVSVSAKTG 592
>gi|380510024|ref|ZP_09853431.1| GTP-binding elongation factor protein [Xanthomonas sacchari NCPPB
4393]
Length = 609
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/600 (57%), Positives = 451/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT EQLDFP++YTSAL+GYA+ + R G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATNEQLDFPIVYTSALNGYASLDDSVRDGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++ P + + P Q++I L+Y++++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMQHAPKPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGVLKKNMPVAVID-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ + A +GDIV I+GI+E+ I T+C P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFLGLERIEQDSAQAGDIVAISGIQELTISDTVCALEAPEALPPLTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+K+RL+ E +N+ L+V Q + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLKDRLERETVHNVALKVQQLEDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREG+EL+VSRP VI K ++G+L EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGFELAVSRPEVIIKEIDGQLMEPVEQLVVDIEEQHQGGVMEKLGIR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ G AY+L L++RGRLF D VYEG ++GIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAPGATPAYALGPLEERGRLFAAEGDNVYEGQLVGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L IK TLE A++FI DDELVE+TPK IRLRK+ L ENERK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKHLTENERKR 604
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVTNHG 116
+ I+ HVDHGKT+L+D + K + SE + + + N +T G
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQG 68
Query: 117 S-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ I +DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|344206213|ref|YP_004791354.1| GTP-binding protein TypA [Stenotrophomonas maltophilia JV3]
gi|343777575|gb|AEM50128.1| GTP-binding protein TypA [Stenotrophomonas maltophilia JV3]
Length = 631
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/606 (57%), Positives = 448/606 (73%), Gaps = 15/606 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG- 984
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +
Sbjct: 26 AIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWEDK 85
Query: 985 -----TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFK
Sbjct: 86 KTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFK 145
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVVVNK+DR +RPEWV+D FDLFDKL AT EQLDFP++Y SAL+GYA R G+
Sbjct: 146 PIVVVNKVDRPGSRPEWVIDQVFDLFDKLGATNEQLDFPIVYASALNGYAGLEDTVRDGD 205
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PL+EAI+++ P + + P Q++I L+Y++++G IGIGRI G +K V +++
Sbjct: 206 MTPLYEAIMQHAPRPEVDPEGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMQVAVIDR 265
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
K N K+ Q+ F GL+R+ + A +GDIV I+GI E+ I T+C P P LP L
Sbjct: 266 EGKKRN-GKVAQVLGFLGLERIEQDTAEAGDIVAISGIPELTISDTLCHPENPEALPALT 324
Query: 1220 IDEPTLTINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
+DEPT+++ F VNNSP AG + GKF+T+RQIK+RLD E +N+ L+V Q + D +
Sbjct: 325 VDEPTISMTFQVNNSPFAGNKDLSGGKFLTSRQIKDRLDREQVHNVALKVEQLEDADK-F 383
Query: 1276 EVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIM 1335
VSGRGELHL++LIENMRREGYEL+VSRP VI K ++G++ EP E L VDIEE++QG +M
Sbjct: 384 LVSGRGELHLSVLIENMRREGYELAVSRPEVIIKEIDGQMMEPIEQLVVDIEEVHQGGVM 443
Query: 1336 QKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFY 1395
+KL R G LKN+E + K RVRLEY+IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P
Sbjct: 444 EKLGTRKGQLKNMEPDGKGRVRLEYQIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGP-- 501
Query: 1396 NKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDL 1455
K + + KR NGV+I+ G AYSL LQ+RG+LF D VYEG ++GIHS+DNDL
Sbjct: 502 -KEQGAIAKRINGVMIANAPGTTPAYSLGPLQERGKLFAAEGDNVYEGQLVGIHSKDNDL 560
Query: 1456 LVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLK 1515
VN IK K LTN+R+SG D+AIQL IK +LE A++FI DDELVEITPK IRLRK+FL
Sbjct: 561 TVNAIKTKPLTNMRASGKDDAIQLTPAIKYSLEQALDFIEDDELVEITPKEIRLRKKFLT 620
Query: 1516 ENERKK 1521
E++RKK
Sbjct: 621 ESDRKK 626
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + + N ++ + +IT+
Sbjct: 25 IAIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWED 84
Query: 121 -----------LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
+DTPGH F R + D V+++V A DG MPQTR A G
Sbjct: 85 KKTGIKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGF 144
Query: 170 PLIVAINKIDK 180
IV +NK+D+
Sbjct: 145 KPIVVVNKVDR 155
>gi|88812684|ref|ZP_01127931.1| GTP-binding protein TypA [Nitrococcus mobilis Nb-231]
gi|88790100|gb|EAR21220.1| GTP-binding protein TypA [Nitrococcus mobilis Nb-231]
Length = 605
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+ SG+ + + R+MDSNEIE+ERGITI SKN +IE+ G
Sbjct: 9 AIIAHVDHGKTTLVDRLLQDSGSLQNRGALPERVMDSNEIERERGITILSKNTAIEWQGH 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KAL GF+PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTDKALAQGFRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WV+D TFDLF +L A++EQLDFPV+Y SAL+GYA+ S R G+M LFE
Sbjct: 129 KIDRPEARPSWVLDQTFDLFAELGASDEQLDFPVVYCSALNGYASLTSAVRTGDMTALFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I +VP + P Q+Q+ +L+YSSY+G IGIGRI GR+ + + +V ++ +
Sbjct: 189 IIRDHVPPPAVDPEGPFQMQVSALDYSSYVGLIGIGRIKRGRVWTNRPIVTIDRAGGR-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I Q+ F GL+R+ V++A +GDI+ +G+ ++ I T+CDP LP L++DEPT+
Sbjct: 248 AGRILQVLGFLGLNRIEVSDAQAGDIIAFSGVADVQISDTLCDPGAVEALPPLSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SPLAGR+G++IT QI+ RL+ E+++N+ LRVT+ + D + V GRGELHL
Sbjct: 308 AMTFQVNTSPLAGRDGRYITAPQIRERLERELQHNVALRVTETEDPDKL-RVCGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL VSRP VI + ++GE EP+E + VD+ E +QG +M+KL RGG L
Sbjct: 367 SILIENMRREGYELGVSRPEVIIREIDGERQEPWERVSVDVAEFHQGPVMEKLGARGGAL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + R+RL+Y IP+RGLIGF+ +F++ T G+GL+ HVF+ Y P Y G+R
Sbjct: 427 QNMHPPSQGRIRLDYLIPARGLIGFRTQFLSATSGSGLLYHVFDHYGPV-KPGPY--GQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NG LIS G+A+ Y+L+ LQ+RGRL I D VYEGM+IGIHSRDNDLLVNP+K KQL
Sbjct: 484 PNGALISNAGGRALGYALFNLQERGRLLIGPGDEVYEGMVIGIHSRDNDLLVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE+I L P+++TLE A+E I+ DE+VE+TP IR+RK+ L+E+ERK+
Sbjct: 544 TNIRAAGSDESIILTPPLRLTLEQALEIIDQDEVVEVTPNAIRVRKKLLREHERKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDRLLQDSGSLQNRGALPERVMDSNEIERERGITILSKNTAIEWQG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G IV I
Sbjct: 68 HRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTDKALAQGFRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|350560460|ref|ZP_08929300.1| GTP-binding protein TypA [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782728|gb|EGZ37011.1| GTP-binding protein TypA [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 605
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/596 (59%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT R+MDSN IEKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTLDARTEQGERVMDSNAIEKERGITILAKNTAIRWQDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA +GFKPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAMGFKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD+L AT+EQLDFP++Y SAL GYA R G+M LFE
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDRLGATDEQLDFPIVYASALQGYAGLEPDVRAGDMNCLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ VP + P Q+Q+ SL+Y+SY G IGIGRI GRI+S V +++ N
Sbjct: 189 TIVERVPPPDVDEAGPFQMQVSSLDYNSYQGLIGIGRIRRGRIRSNTPVKVVDRAGHVRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ QI F GL R+ V EA +GDI+ TG++E+ I T+CDP+ GLP L +DEPT+
Sbjct: 249 -GRVLQIMGFHGLQRIEVAEAAAGDIITFTGMDELYISDTLCDPACAEGLPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AGREGK++T+R +++RL E+K+N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNTSPFAGREGKYVTSRVLRDRLLEELKHNVALRVEETDDADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL VSRP V+ + + GE+ EPYE + +DIEE +QG +M+ L R G+L
Sbjct: 367 GILIENMRREGYELGVSRPEVVLREIEGEICEPYERVAIDIEEAHQGAVMEALGTRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y +PSRGLIGFQ EF+T T GTG++ HVFE Y P+ + +G R
Sbjct: 427 QDMVPDGKGRVRLDYVMPSRGLIGFQTEFLTTTSGTGILHHVFEHYGPYRAGA---IGAR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ Y+L+ LQDRGRLFI + VYEGM+IGIHSRDNDL+VNP+K KQL
Sbjct: 484 NNGVLIANGAGKALGYALFNLQDRGRLFIGPGEDVYEGMVIGIHSRDNDLVVNPLKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SGSDE I L PI++TLE AIEFI++DELVE+TP+NIR+RK+FL E+ERK+
Sbjct: 544 TNIRASGSDENILLTPPIRMTLEQAIEFIDEDELVEVTPENIRIRKKFLLEHERKR 599
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTLDARTEQGERVMDSNAIEKERGITILAKNTAIRWQD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAMGFKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|221067736|ref|ZP_03543841.1| translation initiation factor IF-2 [Comamonas testosteroni KF-1]
gi|220712759|gb|EED68127.1| translation initiation factor IF-2 [Comamonas testosteroni KF-1]
Length = 944
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/539 (60%), Positives = 436/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S +IK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+D E+F E + N
Sbjct: 379 MAIKASELIKVLMKMGQMVTINQPLDQDTAMIVVEEMGHTAKVAALDDLEAFTAEEVS-N 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G ITF
Sbjct: 438 AEAEKLPRAPVVTVMGHVDHGKTSLLDYIRRTKVASGEAGGITQHIGAYHVKTPRGIITF 497
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LV AADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 498 LDTPGHEAFTAMRARGAKSTDIVILVAAADDGVMPQTKEAIKHAKAAGVPIVVAITKADK 557
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L+ E+V+PEEYGG SPF+++S+KTG GI++LLE + LQAE+LELKAPV
Sbjct: 558 PEANPDRVKQELVVEEVLPEEYGGDSPFVAVSSKTGQGIDELLEQVLLQAEVLELKAPVE 617
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+G VATVL+QSGTL+ D+V+AG +YGR+R+ML+E+GK EAGP
Sbjct: 618 AAAKGLVIEAQLDKGRGTVATVLVQSGTLKVGDVVLAGQTYGRVRAMLDEDGKQTKEAGP 677
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL +VP +G++ V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF +++
Sbjct: 678 SIPVEIQGLNEVPQAGDDFMVLSDERRAREIATYRAGKFRNTKLAKQQAAKLENMFAEMS 737
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
V+ L IIIK D+ GS+E L SL LSTD++K+Q++++ VG I+ESD+NLA+ASKAI
Sbjct: 738 AGDVQTLPIIIKADMQGSQEALAASLLKLSTDEIKVQLVYSGVGGISESDVNLALASKAI 797
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RK A+ N++++RY+NIIY+ + E+K+ ++ ++ EK+E ++G+AEIR
Sbjct: 798 IIGFNVRADAQARKTAEGNDVDVRYYNIIYDAVDEVKAAMSGMLAPEKREEIIGMAEIRT 857
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + K+ IAG YI +G + R++ R+LR+ +I+TGE++SL+R KD+VKEVK GFEC
Sbjct: 858 VFVATKIGTIAGSYITQGHVTRNAHFRLLRDNVVIYTGEIESLRRLKDDVKEVKEGFEC 916
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RGI F
Sbjct: 451 VMGHVDHGKTSLLDYIRRTKVASGEAGGITQHI-GAYHVKTPRGIITF------------ 497
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQT+ + A G +V + K
Sbjct: 498 ---LDTPGHEAFTAMRARGAKSTDIVILVAAADDGVMPQTKEAIKHAKAAGVPIVVAITK 554
Query: 1047 IDRSNARPEWV 1057
D+ A P+ V
Sbjct: 555 ADKPEANPDRV 565
>gi|325916520|ref|ZP_08178789.1| GTP-binding protein TypA/BipA [Xanthomonas vesicatoria ATCC 35937]
gi|325537309|gb|EGD09036.1| GTP-binding protein TypA/BipA [Xanthomonas vesicatoria ATCC 35937]
Length = 609
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/600 (57%), Positives = 453/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWNGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT+EQLDFP++YTSAL+GYA+ +S R G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATDEQLDFPIVYTSALNGYASLDSDVRDGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q++I L+Y++++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMQHVSAPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGVLKKNMPVSVID-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ + A +GDIV I+G+ E+ I T+C P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFLGLERIEQDTAEAGDIVAISGVAELTISDTVCALEHPESLPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+++RLD E +N+ L+V + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLRDRLDREKVHNVALKVEEGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+ EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGKQMEPIEQLVVDIEEQHQGGVMEKLGTR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ G AY+L L++RGRLF D VYEG +IGIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAPGATPAYALGPLEERGRLFAAEGDNVYEGQLIGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L IK TLE A++FI DDELVE+TPK IRLRK+FL E++RK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKFLTESDRKR 604
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + SE + + + N + N
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWNG 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|333376177|ref|ZP_08467969.1| translation initiation factor IF2 [Kingella kingae ATCC 23330]
gi|332968912|gb|EGK07959.1| translation initiation factor IF2 [Kingella kingae ATCC 23330]
Length = 943
Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/539 (62%), Positives = 437/539 (81%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ LDQ+TA+++VEEMGH+ + ++DP++FL E N
Sbjct: 379 MAVKGVEVVKVLMKMGMMVTINQSLDQDTALLVVEEMGHIGKPAAIDDPDAFLNEETKHN 438
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ ESL R P+VT+MGHVDHGKTSLLDYIR+T VV SEAGGITQHIGAY+V T G ITF
Sbjct: 439 V--ESLPRPPVVTVMGHVDHGKTSLLDYIRRTKVVASEAGGITQHIGAYHVETPKGVITF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 497 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +V+ +E+GG F+ +SAK G+ I+KLLE + L+AE+LEL APV
Sbjct: 557 EAANPERIRQELTQHEVVCDEWGGDVQFVDVSAKKGLNIDKLLEAVLLEAEVLELTAPVD 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTLR D+++ G+S+G+IR+M +ENGK I EAGP
Sbjct: 617 APAKGLIVEARLDKGRGAVATLLVQSGTLRKGDMLLVGSSFGKIRAMSDENGKPINEAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKARE+ LFRQGKFRDV+L+KQ+ K ENMFN++
Sbjct: 677 SIPVEILGLSDVPKAGEDALVLEDEKKAREVALFRQGKFRDVRLAKQQAAKLENMFNNMG 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E+ +NL II+K DV GS E L+ SL+ LSTD+V++QV+H+ VG I ESD+NLAIAS A+
Sbjct: 737 CEQAQNLPIIVKADVQGSYEALSGSLQKLSTDEVRVQVLHSGVGGITESDVNLAIASGAL 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 797 IIGFNVRADASARKLAETEDVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQITGTVEIRQ 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +GL++RDSK+R++RN +I TGEL SLKR+KD+VKEVK GFEC
Sbjct: 857 VISVSKVGNIAGCMVTDGLVKRDSKVRVIRNNVVIHTGELSSLKRYKDDVKEVKQGFEC 915
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 22/153 (14%)
Query: 911 NLFLSDE---NIYILIKSAII---AHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNE 964
+ FL++E N+ L + ++ HVDHGKT+L+D++ R + I I +
Sbjct: 428 DAFLNEETKHNVESLPRPPVVTVMGHVDHGKTSLLDYIRRTKVVASEAGGITQHI-GAYH 486
Query: 965 IEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMP 1024
+E +G+ F +DTPGH F R D V+L++ A +G MP
Sbjct: 487 VETPKGVITF---------------LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMP 531
Query: 1025 QTRFVTRKALKLGFKPIVVVNKIDRSNARPEWV 1057
QT A G +V VNKID+ A PE +
Sbjct: 532 QTIEAIAHAKAAGVPIVVAVNKIDKEAANPERI 564
>gi|433679081|ref|ZP_20510863.1| GTP-binding protein lepA [Xanthomonas translucens pv. translucens DSM
18974]
gi|440732450|ref|ZP_20912379.1| GTP-binding protein TypA [Xanthomonas translucens DAR61454]
gi|430815813|emb|CCP41408.1| GTP-binding protein lepA [Xanthomonas translucens pv. translucens DSM
18974]
gi|440368731|gb|ELQ05756.1| GTP-binding protein TypA [Xanthomonas translucens DAR61454]
Length = 609
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/600 (58%), Positives = 455/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT EQLDFP++Y SALHGYA+ + AR+G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATNEQLDFPIVYASALHGYASLDDSAREGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + + + P Q++I L+Y++++G IGIGRI G++K V I++ + K
Sbjct: 190 AIMKHVAPPQVDPDGPFQMRISQLDYNNFVGLIGIGRIQRGKVKKNMPVSIVD-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ KI Q+ F GL+RV V EA +GDIV I+G+ ++ I TIC P LP L +DEPT+
Sbjct: 249 QGKILQVLGFMGLERVEVEEAEAGDIVAISGVADMSISDTICALDTPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKFIT+RQI+ RL+ E +N+ L+V + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGSKEHSGGKFITSRQIRERLERETLHNVALKVEEGSDPDK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREG+EL+VSRP VI K ++G+L EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGFELAVSRPEVIVKEIDGKLMEPVEQLVVDIEEQHQGGVMEKLGVR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ +G AYSL L++RGRLF D VYEG +IGIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAAGATPAYSLGPLEERGRLFAAEGDNVYEGQLIGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L IK TLE A++FI DDELVE+TPK IRLRK+FL E++RK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKFLTESDRKR 604
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVTNHG 116
+ I+ HVDHGKT+L+D + K + SE + + + N +T G
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQG 68
Query: 117 S-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ I +DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|119505500|ref|ZP_01627572.1| predicted membrane GTPase involved in stress response [marine gamma
proteobacterium HTCC2080]
gi|119458609|gb|EAW39712.1| predicted membrane GTPase involved in stress response [marine gamma
proteobacterium HTCC2080]
Length = 605
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + RIMDSN+ EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDCLLQQSGTLDRKAAGTERIMDSNDQEKERGITILAKNTAIRWQDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA + G PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLFD L A EEQLDFP+IY SAL+G + E +A +M PLF+
Sbjct: 129 KVDRPGARPDWVVDQVFDLFDTLGANEEQLDFPIIYASALNGISGEEHEAMGTDMNPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP +++ PLQLQI +L+YSSY+G IG+GRI G + V +++ D N
Sbjct: 189 TIVDKVPAPSVDTSGPLQLQISALDYSSYVGVIGVGRITRGSVTPNTQVAVIDRNGDSRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI Q+ ++GL+RV V+EA +GDIV +TGIE + I T+C P+ P LP L +DEPT+
Sbjct: 249 -GKILQVMGYQGLERVEVSEAGAGDIVCVTGIEALNISDTLCSPATPEPLPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG EGK++T+R I+ RL+ E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGLEGKYVTSRNIRERLERELIHNVALRVEEGDSPDK-FSVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE+MRREG+EL VSRP VI K ++GEL EPYENL +D E +QG +M++L R ++
Sbjct: 367 SVLIESMRREGFELGVSRPEVIQKEIDGELCEPYENLVIDCESEHQGGVMEELGLRRAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ I+ RVRLE+ +P+RGLIGF+++F+TLT G+G+++H+F+ Y P + +LG R
Sbjct: 427 KNLVIDGNGRVRLEFIVPARGLIGFRSQFLTLTSGSGIMTHIFDHYGPV---KRAELGGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S GK +AY+L+ LQ+RGRLF++ N VYEG I+G+HSR NDL VNP K KQL
Sbjct: 484 VNGVLVSMVKGKTLAYALYTLQERGRLFVDPNKAVYEGQIVGLHSRGNDLAVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L SP++ +LE A+EFI DDELVE+TP +IRLRK+ L E+ERK+
Sbjct: 544 TNVRASGTDEALILTSPVRHSLEQALEFIEDDELVEVTPDSIRLRKKLLLEHERKR 599
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + T+ I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDCLLQQSGTLDRKAAGTERIMDSNDQEKERGITILAKNTAIRWQD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLNPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|78484514|ref|YP_390439.1| GTP-binding protein TypA [Thiomicrospira crunogena XCL-2]
gi|78362800|gb|ABB40765.1| GTP-binding protein TypA [Thiomicrospira crunogena XCL-2]
Length = 607
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/597 (57%), Positives = 452/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRK-NQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LLRQSGTF +++ R+MDSN++EKERGITI SKN ++++N
Sbjct: 10 AIIAHVDHGKTTLVDQLLRQSGTFDDIRKDMGDRMMDSNDLEKERGITILSKNTAVKWND 69
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVERILSMVD+VLLL+D+VEGPMPQTRFVT KALK G KPIVV+
Sbjct: 70 FRINIVDTPGHADFGGEVERILSMVDSVLLLVDSVEGPMPQTRFVTEKALKQGLKPIVVI 129
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NKIDR ARP+WV+D TFDLFD+L AT+EQ+DF VIY S L+G+A R+G+M P+F
Sbjct: 130 NKIDRPGARPDWVLDQTFDLFDRLGATDEQMDFDVIYASGLNGFAGLEEDVREGDMTPVF 189
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+ I + VP + P QLQ ISL+Y +Y G IG GRI G +++ +VI++ + K
Sbjct: 190 KIITENVPAPDVDLGGPFQLQCISLDYDTYKGVIGTGRIKRGAVQTGMPIVIVDA-EGKE 248
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K K+ ++ + GL+RV V EA +GDIV TG++ + I T+CDP+ LP L +DEPT
Sbjct: 249 RKGKMGELFGYHGLERVSVEEAHAGDIVAFTGLDPLNISDTLCDPNHVEALPALTVDEPT 308
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VN+SP G++GK +T+RQI+ RLD E+ N+ LRV + + D + + VSGRGELH
Sbjct: 309 VSMTFQVNDSPFVGQDGKLLTSRQIRERLDKELLTNVALRVEETE-DANKFRVSGRGELH 367
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIE MRREG+E+ +SRP VIFK ++GE +EPYENL VD+ E QG IM+KL R +
Sbjct: 368 LSVLIETMRREGFEMGISRPEVIFKEVDGETHEPYENLTVDVPEEAQGAIMEKLGERKAE 427
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + RVR+++ IPSRGLIGF+ EF+T T+G GLI F Y P ++ + LG+
Sbjct: 428 MQDMVPDGHGRVRIDFIIPSRGLIGFRTEFMTATQGNGLIFSSFSHYGPKFSGT---LGE 484
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS GKA+A++L+ LQDRGRL+I H + VYEGMIIG+HSR NDL VNP+K KQ
Sbjct: 485 RNNGVLISIGQGKALAFALFNLQDRGRLYIGHGEEVYEGMIIGLHSRANDLTVNPLKGKQ 544
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG+DEA+ L PI +LE A+EFI+DDELVE+TP ++R+RK+ L ENERKK
Sbjct: 545 LTNMRASGTDEALTLTPPIIFSLEQALEFIDDDELVEVTPHHVRIRKKLLTENERKK 601
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSE-----------------AGGITQHIGAYNVVTN 114
+ I+ HVDHGKT+L+D + + + F + GIT V N
Sbjct: 9 IAIIAHVDHGKTTLVDQLLRQSGTFDDIRKDMGDRMMDSNDLEKERGITILSKNTAVKWN 68
Query: 115 HGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+L+V + +G MPQTR A G+ IV
Sbjct: 69 DFRINIVDTPGHADFGGEVERILSMVDSVLLLVDSVEGPMPQTRFVTEKALKQGLKPIVV 128
Query: 175 INKIDK 180
INKID+
Sbjct: 129 INKIDR 134
>gi|239815726|ref|YP_002944636.1| translation initiation factor IF-2 [Variovorax paradoxus S110]
gi|259491503|sp|C5CLW3.1|IF2_VARPS RecName: Full=Translation initiation factor IF-2
gi|239802303|gb|ACS19370.1| translation initiation factor IF-2 [Variovorax paradoxus S110]
Length = 984
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/539 (60%), Positives = 433/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+ VIK LMKLGQM TINQ LDQ+TAMILVEEMGH A + L+DPE+F + +
Sbjct: 419 MAVKAQEVIKQLMKLGQMATINQSLDQDTAMILVEEMGHNAVVAALDDPEAFTDEDVSAQ 478
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
TAE+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ++F
Sbjct: 479 -TAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVQTERGMVSF 537
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VAINKIDK
Sbjct: 538 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINKIDK 597
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D + DR+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLE + LQAE+LELKAPV
Sbjct: 598 PDASPDRVKQELVAEEVVPEEYGGDVPFVPVSAKTGQGIDDLLEQVLLQAEVLELKAPVD 657
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG++YGR+R+ML+E+G+ I AGP
Sbjct: 658 AAAKGLVIEAQLDKGRGPVATVLVQSGTLKTGDVVLAGSTYGRVRAMLDEDGRTIKSAGP 717
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+K + +NMF D++
Sbjct: 718 SIPVEIQGLTEVPQAGDEFMVMSDERRAREIATYRAGKFRNTKLAKAQAANLQNMFTDLS 777
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V+ L IIIK DV GS+E L +SL L+TD+VK+Q+++ VG I+ESDINLAIASKAI
Sbjct: 778 AGEVQTLRIIIKADVQGSQEALAQSLLKLATDEVKVQIVYAGVGGISESDINLAIASKAI 837
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ N + + Y++IIY+ + EIK ++ ++ E++E ++G AEIR
Sbjct: 838 VIGFNVRADAGARKLAEGNGVQLNYYSIIYDAVDEIKVAMSGMLAPERREEIIGSAEIRT 897
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI G + R + R+LR+ +I+TGE+DS+KR KD+V+EV+ GFEC
Sbjct: 898 VFVASKIGTVAGSYITSGSVNRSAHFRLLRDNVVIYTGEVDSIKRMKDDVREVREGFEC 956
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ ERG+ F
Sbjct: 491 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVQTERGMVSF------------ 537
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A G +V +NK
Sbjct: 538 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINK 594
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A P+ V + +++ E D P + SA G
Sbjct: 595 IDKPDASPDRVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 633
>gi|333906845|ref|YP_004480431.1| GTP-binding protein TypA [Marinomonas posidonica IVIA-Po-181]
gi|333476851|gb|AEF53512.1| GTP-binding protein TypA [Marinomonas posidonica IVIA-Po-181]
Length = 606
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/600 (56%), Positives = 449/600 (74%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + RIMDSN+ EKERGITI +KN +I++N
Sbjct: 12 AIIAHVDHGKTTLVDQLLSQSGTLDRKDEGAERIMDSNDQEKERGITILAKNTAIKWNDY 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA + G +PIVV+N
Sbjct: 72 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLRPIVVIN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A+EEQLDFPVIY SA++G + + + +M PL++
Sbjct: 132 KIDRPGARPDWVMDQVFDLFDSLGASEEQLDFPVIYASAINGISGNDPEQMAEDMTPLYQ 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VPV + Q+Q+ +L+Y SY+G IG+GRI G + Q VV+ + D K
Sbjct: 192 MIVDSVPVPNVDPEGTFQMQVSALDYDSYVGVIGVGRITRGSLSPNQQVVVKSA-DGKER 250
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K K+ ++ + GL RV ++A +GDIV ITGI+ + I T+CDP+ LP+L +DEPT+
Sbjct: 251 KGKVLNVKGYHGLQRVDTDQAYAGDIVCITGIDGLSISDTLCDPTCVESLPVLTVDEPTV 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F+VN+SP AG+EGKF+TTR IK+RLD E+ +N+ LRVTQ D + VSGRGELHL
Sbjct: 311 SMTFIVNDSPFAGKEGKFVTTRNIKDRLDQELIHNVALRVTQGDTPDK-FIVSGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ VSRP V+ K ++G++ EP+E + +D+EE +QG IM++L R +L
Sbjct: 370 SVLIETMRREGFEMGVSRPEVVKKEIDGQIQEPFEQVVIDVEEQHQGSIMEELGLRKAEL 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K RVRLE+ +PSRGLIGF+ F+TLT G+G+++ VF+ Y P + ++ R
Sbjct: 430 TNMEPDGKGRVRLEFIVPSRGLIGFRGLFLTLTSGSGIMTSVFDHYGPVKDG---EVTGR 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GK AY+L+ LQ RGR+F+ H +YEG IIGIHSRDNDL VNP+K KQL
Sbjct: 487 QNGVLVSMLTGKTAAYALFNLQSRGRMFLGHAVDIYEGQIIGIHSRDNDLAVNPVKGKQL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA+ L PIK TLE A+EFI DDELVE+TP++IR+RK+ L ENERK+ K
Sbjct: 547 TNVRASGTDEALTLTPPIKHTLEQALEFIEDDELVEVTPESIRIRKKLLTENERKRAGRK 606
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + I N IT L
Sbjct: 11 VAIIAHVDHGKTTLVDQLLSQSGTLDRKDEGAERIMDSNDQEKERGITILAKNTAIKWND 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G+ IV I
Sbjct: 71 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLRPIVVI 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|319787896|ref|YP_004147371.1| GTP-binding protein TypA [Pseudoxanthomonas suwonensis 11-1]
gi|317466408|gb|ADV28140.1| GTP-binding protein TypA [Pseudoxanthomonas suwonensis 11-1]
Length = 609
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/600 (56%), Positives = 447/600 (74%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWRGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWVV+ +DLFD+L AT EQ+DFP+IY S L GYA R G+M PL+E
Sbjct: 130 KVDRPGARPEWVVEQVWDLFDRLGATPEQMDFPIIYASGLAGYAGLTEDVRSGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++VPV + P Q++I L+Y+S++G IGIGRI G +K Q VV+++ + K
Sbjct: 190 AIMQHVPVPPVDPEGPFQMRISQLDYNSFVGVIGIGRIQRGTLKKNQPVVVIDR-EGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ A +GDIV I+GI+E+ I T+C P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFMGLERIEQESAQAGDIVAISGIQELTISDTVCALEAPEALPPLTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+K RL+ E +N+ L+V Q + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLKERLERETVHNVALKVEQLEDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+L EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGQLMEPIEQLVVDIEEQHQGGVMEKLGIR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KAQLKNMEPDGKGRVRLDYEIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+I+ +G AY+L L++RGRLF D VYEG +IGIHS+DNDL VN IK
Sbjct: 485 IAKRPNGVMIANAAGPTPAYALGPLEERGRLFAAEGDNVYEGQLIGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L +K +LE A++FI DDELVE+TPK IRLRK+ L E++RK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPALKFSLEQALDFIEDDELVEVTPKEIRLRKKMLTESDRKR 604
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + + N ++ + +IT+
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWRG 68
Query: 121 -----LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|406938354|gb|EKD71604.1| hypothetical protein ACD_46C00147G0002 [uncultured bacterium]
Length = 602
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/596 (57%), Positives = 450/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+Q+ + K RIMDSN++E+ERGITI +KN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQTSSVSKKVTNTERIMDSNDLERERGITILAKNTAIKWGDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIV++N
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLHPIVIIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT EQLDFPV+YTSAL GYA + + + +M PLFE
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGATNEQLDFPVVYTSALLGYATLDLQQKSEDMRPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+KYVP K + + P Q+QI +L+YSSY+G IGIGRI GR K+ V I++ + K
Sbjct: 189 TIVKYVPAPKVDPDGPFQMQISTLDYSSYVGMIGIGRITRGRAKTNMPVTIIDR-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +I Q+ + GLDR V A +GDI+ ITG++E+ I T+CDP+ LP L +DEPT+
Sbjct: 248 QGRILQVLEYLGLDRSEVPMANAGDIIAITGVDELKISDTLCDPACVEALPALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AG+EGK++T+R+I+ RL E+ +N+ LRV ++ D ++VSGRGELHL
Sbjct: 308 SMTFQVNTSPFAGKEGKYVTSRKIRERLYQELMHNVALRV-EDTADPDKFKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++G+++EPYE L +D+ QG IM+KL R G+L
Sbjct: 367 SILIENMRREGYELAVSRPEVITKMVDGDIHEPYETLAIDVPSEYQGTIMEKLGSRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++ ++K RVRL+Y IPSR LIGF EF+TLT GTG++ HVF Y +K ++ R
Sbjct: 427 KHMQTDDKGRVRLDYVIPSRALIGFHTEFLTLTSGTGIMHHVFSHYGA---AAKGEIPHR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +G A+AYSL+ LQ+RGR+ I VYEGMI+GIHSRDNDL+VN K KQL
Sbjct: 484 QNGVLISNQAGMALAYSLFNLQERGRMIIGPQVEVYEGMIVGIHSRDNDLVVNVCKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L I +LE A+EFI DDELVE+TP+ IR+RK+FLKE+ERK+
Sbjct: 544 TNIRAAGSDENIILTPHIHFSLEQALEFIEDDELVEVTPQTIRVRKKFLKEHERKR 599
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + S+ T+ I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQTSSVSKKVTNTERIMDSNDLERERGITILAKNTAIKWGD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLHPIVII 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|325921512|ref|ZP_08183367.1| GTP-binding protein TypA/BipA [Xanthomonas gardneri ATCC 19865]
gi|325548059|gb|EGD19058.1| GTP-binding protein TypA/BipA [Xanthomonas gardneri ATCC 19865]
Length = 609
Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/600 (57%), Positives = 454/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWNGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT+EQLDFP++YTSAL+GYA+ +S R G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATDEQLDFPIVYTSALNGYASLDSSVRDGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q++I L+Y++++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMQHVSAPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGVLKKNMPVSVID-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ + A +GDIV I+G+ E+ I T+C P GLP L +DEPT+
Sbjct: 249 QGKVLQVLGFLGLERIEQDTAEAGDIVAISGVSELTISDTVCALDAPEGLPPLTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+++RLD E +N+ L+V + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLRDRLDREKVHNVALKVEEGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+ EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGKQMEPIEQLVVDIEEQHQGGVMEKLGSR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMESDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ +G AY+L L++RGRLF D VYEG ++GIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAAGATPAYALGPLEERGRLFAAEGDNVYEGQLVGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L IK TLE A++FI DDELVE+TPK IRLRK+ L E++RK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKGLTESDRKR 604
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + SE + + + N + N
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWNG 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|407893414|ref|ZP_11152444.1| GTP-binding protein TypA [Diplorickettsia massiliensis 20B]
Length = 604
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/596 (57%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT RIMDSN +E+ERGITI +KN SIE+ G
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLSTRAAPVERIMDSNALEQERGITILAKNTSIEWQGH 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFAKNLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +ARP+WV++ FDLFD+L ATEEQLDFPV+Y SAL GYA + ++ PLF
Sbjct: 129 KIDRPSARPDWVINQVFDLFDRLGATEEQLDFPVVYASALQGYATLDLSQLSEDLTPLFA 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + P Q+QI +L+YSSY+G IGIGRI G ++ VV+++ + K
Sbjct: 189 TIIGQVSPPAVDCHGPFQMQITTLDYSSYVGTIGIGRIQRGTARTNMPVVLID-KEGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ ++ Q+ ++GL+RV V +A +GDIV ITGI+++ I T+CDP + LP L +DEPT+
Sbjct: 248 RERVLQVLGYRGLERVEVPQAEAGDIVAITGIDKLNISDTLCDPEQVEALPGLTVDEPTM 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG +GKFIT+RQIK RLD E+ +N+ LRV + D + + VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGLDGKFITSRQIKERLDKELLHNVALRV-EPTEDPNRFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREG+EL VSRP VI K +NGEL+EPYE L +D+EE++QG IM+K+ R G+L
Sbjct: 367 SILIETMRREGFELGVSRPEVILKEVNGELHEPYEMLTIDVEEVHQGSIMEKMGSRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVRL+Y+IP+R LIGF+ EF+T T G GL+ HVF+ Y P K L KR
Sbjct: 427 VDMVSDGKGRVRLDYKIPTRALIGFRTEFLTATSGLGLMHHVFDHYGP---AKKGALAKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA A+SL+ LQ+RG+L I VYEGMI+GIH+RDNDL+VN +K KQL
Sbjct: 484 SNGVLISNQAGKATAFSLFNLQERGKLLIGPQTEVYEGMIVGIHARDNDLVVNVVKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE + L PI +LE ++EF+ DDEL+E+TP ++RLRK++LKE+ERK+
Sbjct: 544 TNIRAAGSDENVILTPPILFSLEQSLEFLEDDELLEVTPHHLRLRKKYLKEHERKR 599
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 59/133 (44%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + S + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLSTRAAPVERIMDSNALEQERGITILAKNTSIEWQG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A + IV I
Sbjct: 68 HRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFAKNLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ D +
Sbjct: 128 NKIDRPSARPDWV 140
>gi|91774423|ref|YP_544179.1| translation initiation factor 2 [Methylobacillus flagellatus KT]
gi|123078692|sp|Q1GXD6.1|IF2_METFK RecName: Full=Translation initiation factor IF-2
gi|91708410|gb|ABE48338.1| bacterial translation initiation factor 2 (bIF-2) [Methylobacillus
flagellatus KT]
Length = 907
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/539 (61%), Positives = 437/539 (81%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK LMK+G MVTINQVLDQETA+I+VEEMGH A A+ NDPE+FL +
Sbjct: 343 MAVKASEVIKTLMKMGMMVTINQVLDQETAIIIVEEMGHNAKAAASNDPEAFLDEAEHAE 402
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E R P+VT+MGHVDHGKTSLLDYIR++ V EAGGITQHIGAY+V T G +TF
Sbjct: 403 AVQEP--RPPVVTVMGHVDHGKTSLLDYIRRSRVASGEAGGITQHIGAYHVETPRGMVTF 460
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TD+V+LVVAADDGVMPQT EA+ HAK + VP++VA+NKIDK
Sbjct: 461 LDTPGHEAFTAMRARGAKATDVVILVVAADDGVMPQTIEAVHHAKAANVPIVVAVNKIDK 520
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L+S +V+PE++GG + F+ +SAKTG GI+ LLE + LQAE+LELKAP
Sbjct: 521 PEANPERVKQELVSHEVVPEDWGGDTMFVEVSAKTGAGIDNLLEAVLLQAEVLELKAPKN 580
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG++IE RLDKG+GPV+T+L+QSGTL+ D+++AG +YGR+R+ML+E+G+++ EAGP
Sbjct: 581 IPAKGLVIEGRLDKGRGPVSTILVQSGTLQRGDMILAGTAYGRVRAMLDESGRDVKEAGP 640
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K E+MF +
Sbjct: 641 SIPVEILGLSDVPSAGEEVIVLNDERKAREIALFRQGKFRDVKLAKQQAAKLESMFEQMG 700
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK+DV GS E L+ SL+ LSTD+VK+ +IH VG I+ESD+NLA ASKA+
Sbjct: 701 EGEVKVLHLIIKSDVQGSYEALSTSLQKLSTDEVKVNIIHTGVGAISESDVNLAAASKAV 760
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKL + +++RY+NIIY + E+K+ + ++ E+KEN++G EIR+
Sbjct: 761 LIGFNVRADAGARKLIESTGVDVRYYNIIYEAVDEVKAALGGMLSPEQKENVIGTVEIRE 820
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V ++KV +AGCY+ +G++RR+SK+R++R+ +I TGELDSLKRFKD+VKEVK+ FEC
Sbjct: 821 VFRISKVGSVAGCYVQDGVVRRNSKVRLIRDNVVIHTGELDSLKRFKDDVKEVKSNFEC 879
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 414 VMGHVDHGKTSLLDYIRRSRVASGEAGGITQHI-GAYHVETPRGMVTF------------ 460
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A +V VNK
Sbjct: 461 ---LDTPGHEAFTAMRARGAKATDVVILVVAADDGVMPQTIEAVHHAKAANVPIVVAVNK 517
Query: 1047 IDRSNARPEWV 1057
ID+ A PE V
Sbjct: 518 IDKPEANPERV 528
>gi|381401977|ref|ZP_09926866.1| translation initiation factor IF-2 [Kingella kingae PYKK081]
gi|380833103|gb|EIC12982.1| translation initiation factor IF-2 [Kingella kingae PYKK081]
Length = 943
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/539 (62%), Positives = 436/539 (80%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ LDQ+TA+++VEEMGH+ + ++DP++FL E +
Sbjct: 379 MAVKGVEVVKALMKMGMMVTINQSLDQDTALLVVEEMGHIGKPAAIDDPDAFLNEETKHD 438
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ ESL R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 439 V--ESLPRPPVVTVMGHVDHGKTSLLDYIRRTKVVAGEAGGITQHIGAYHVETPKGVITF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 497 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +V+ +E+GG FI +SAK G+ I+KLLE + L+AE+LEL APV
Sbjct: 557 EAANPERIRQELTQHEVVCDEWGGDVQFIDVSAKKGLNIDKLLEAVLLEAEVLELTAPVD 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTLR D+++ G+S+G+IR+M +ENGK I EAGP
Sbjct: 617 APAKGLIVEARLDKGRGAVATLLVQSGTLRKGDMLLVGSSFGKIRAMSDENGKPINEAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKARE+ LFRQGKFRDV+L+KQ+ K ENMFN++
Sbjct: 677 SIPVEILGLSDVPKAGEDALVLEDEKKAREVALFRQGKFRDVRLAKQQAAKLENMFNNMG 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
E+ +NL II+K DV GS E L+ SL+ LSTD+V++QV+H+ VG I ESD+NLAIAS A+
Sbjct: 737 CEQAQNLPIIVKADVQGSYEALSGSLQKLSTDEVRVQVLHSGVGGITESDVNLAIASDAL 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 797 IIGFNVRADASARKLAETEDVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQITGTVEIRQ 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +GL++RDSK+R++RN +I TGEL SLKR+KD+VKEVK GFEC
Sbjct: 857 VISVSKVGNIAGCMVTDGLVKRDSKVRVIRNNVVIHTGELSSLKRYKDDVKEVKQGFEC 915
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +G+ F
Sbjct: 450 VMGHVDHGKTSLLDYIRRTKVVAGEAGGITQHI-GAYHVETPKGVITF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 497 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 553
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 554 IDKEAANPERI 564
>gi|424795723|ref|ZP_18221542.1| GTP-binding elongation factor protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422795323|gb|EKU24036.1| GTP-binding elongation factor protein [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 609
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/600 (58%), Positives = 454/600 (75%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT EQLDFP++Y SALHGYA+ + AR+G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATNEQLDFPIVYASALHGYASLDDSAREGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + + + P Q++I L+Y++++G IGIGRI G++K V I++ + K
Sbjct: 190 AIMKHVAPPQVDPDGPFQMRISQLDYNNFVGLIGIGRIQRGKVKKNMPVSIVD-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ KI Q+ F GL+RV V EA +GDIV I+G+ ++ I TIC P LP L +DEPT+
Sbjct: 249 QGKILQVLGFMGLERVEVEEAEAGDIVAISGVADMSISDTICALDTPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKFIT+RQI+ RL+ E +N+ L+V + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGSKEHSGGKFITSRQIRERLERETLHNVALKVEEGSDPDK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREG+EL+VSRP VI K ++G+L EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGFELAVSRPEVIVKEIDGKLMEPVEQLVVDIEEQHQGGVMEKLGVR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ G AYSL L++RGRLF D VYEG +IGIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAPGATPAYSLGPLEERGRLFAAEGDNVYEGQLIGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AI+L IK TLE A++FI DDELVE+TPK IRLRK+FL E++RK+
Sbjct: 545 TKPLTNMRASGKDDAIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKFLTESDRKR 604
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVTNHG 116
+ I+ HVDHGKT+L+D + K + SE + + + N +T G
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQG 68
Query: 117 S-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ I +DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|222110450|ref|YP_002552714.1| translation initiation factor if-2 [Acidovorax ebreus TPSY]
gi|221729894|gb|ACM32714.1| translation initiation factor IF-2 [Acidovorax ebreus TPSY]
Length = 943
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/539 (59%), Positives = 436/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK+LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F E +
Sbjct: 378 MAIKASEVIKSLMKMGQMVTINQPLDQDTAMIVVEEMGHTAKVAALDDPEAFTAEEVSSQ 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR++ V EAGGITQHIGAY+V T G +TF
Sbjct: 438 -DAEQLSRAPVVTVMGHVDHGKTSLLDYIRRSKVASGEAGGITQHIGAYHVETPRGIVTF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LV AADDGVMPQT+EAI HAK +GVP++VA+ K DK
Sbjct: 497 LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAIKHAKAAGVPIVVALTKADK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N++R+KQ+L+ EQV+PEEYGG SPF+++S+KTG+GI+ LLE + LQAE+LELKAPV
Sbjct: 557 PEANIERVKQELVGEQVVPEEYGGDSPFVAVSSKTGMGIDALLEQVLLQAEVLELKAPVD 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+G VATVL+QSGTL+ D+V+AG ++GR+R+ML+E+GK EAGP
Sbjct: 617 AAAKGIVIEAQLDKGRGSVATVLVQSGTLKVGDVVLAGQTFGRVRAMLDEDGKQTKEAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL +VP +G++ V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF ++
Sbjct: 677 SIPVEIQGLNEVPQAGDDFMVLQDERRAREIATYRAGKFRNTKLAKQQAAKLENMFAEMG 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V+ L +IIK DV GS+E L SL LST+++++Q++++ VG I+ESD+NLAIASKAI
Sbjct: 737 AGEVQTLPLIIKADVQGSQEALAASLLKLSTEEIRVQIVYSGVGGISESDVNLAIASKAI 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RK A+ N+++IRY+NIIY+ + E+K+ ++ ++ E++E +G AEIR
Sbjct: 797 VIGFNVRADAQARKTAEGNDVDIRYYNIIYDAVDEVKAAMSGMLAPEQREEAIGTAEIRT 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI G + R+ K R+LR+ +I+TG+++S++R KD+VKEVK GFEC
Sbjct: 857 VFVASKIGTVAGSYITSGQVTRNCKFRLLRDNIVIYTGDVESVRRMKDDVKEVKEGFEC 915
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RGI F
Sbjct: 450 VMGHVDHGKTSLLDYIRRSKVASGEAGGITQHI-GAYHVETPRGIVTF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQT+ + A G +V + K
Sbjct: 497 ---LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAIKHAKAAGVPIVVALTK 553
Query: 1047 IDRSNARPEWV 1057
D+ A E V
Sbjct: 554 ADKPEANIERV 564
>gi|121594899|ref|YP_986795.1| translation initiation factor IF-2 [Acidovorax sp. JS42]
gi|189028277|sp|A1W8Z4.1|IF2_ACISJ RecName: Full=Translation initiation factor IF-2
gi|120606979|gb|ABM42719.1| bacterial translation initiation factor 2 (bIF-2) [Acidovorax sp.
JS42]
Length = 943
Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/539 (59%), Positives = 436/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK+LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F E +
Sbjct: 378 MAIKASEVIKSLMKMGQMVTINQPLDQDTAMIVVEEMGHTAKVAALDDPEAFTAEEVSSQ 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR++ V EAGGITQHIGAY+V T G +TF
Sbjct: 438 -DAEQLSRAPVVTVMGHVDHGKTSLLDYIRRSKVASGEAGGITQHIGAYHVETPRGIVTF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LV AADDGVMPQT+EAI HAK +GVP++VA+ K DK
Sbjct: 497 LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAIKHAKAAGVPIVVALTKADK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N++R+KQ+L+ EQV+PEEYGG SPF+++S+KTG+GI+ LLE + LQAE+LELKAPV
Sbjct: 557 PEANIERVKQELVGEQVVPEEYGGDSPFVAVSSKTGMGIDALLEQVLLQAEVLELKAPVD 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+G VATVL+QSGTL+ D+V+AG ++GR+R+ML+E+GK EAGP
Sbjct: 617 AAAKGIVIETQLDKGRGSVATVLVQSGTLKVGDVVLAGQTFGRVRAMLDEDGKQTKEAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL +VP +G++ V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF ++
Sbjct: 677 SIPVEIQGLNEVPQAGDDFMVLQDERRAREIATYRAGKFRNTKLAKQQAAKLENMFAEMG 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V+ L +IIK DV GS+E L SL LST+++++Q++++ VG I+ESD+NLAIASKAI
Sbjct: 737 AGEVQTLPLIIKADVQGSQEALAASLLKLSTEEIRVQIVYSGVGGISESDVNLAIASKAI 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RK A+ N+++IRY+NIIY+ + E+K+ ++ ++ E++E +G AEIR
Sbjct: 797 VIGFNVRADAQARKTAEGNDVDIRYYNIIYDAVDEVKAAMSGMLAPEQREEAIGTAEIRT 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI G + R+ K R+LR+ +I+TG+++S++R KD+VKEVK GFEC
Sbjct: 857 VFVASKIGTVAGSYITSGQVTRNCKFRLLRDNIVIYTGDVESVRRMKDDVKEVKEGFEC 915
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RGI F
Sbjct: 450 VMGHVDHGKTSLLDYIRRSKVASGEAGGITQHI-GAYHVETPRGIVTF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQT+ + A G +V + K
Sbjct: 497 ---LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTKEAIKHAKAAGVPIVVALTK 553
Query: 1047 IDRSNARPEWV 1057
D+ A E V
Sbjct: 554 ADKPEANIERV 564
>gi|254490990|ref|ZP_05104172.1| GTP-binding protein TypA/BipA [Methylophaga thiooxidans DMS010]
gi|224463899|gb|EEF80166.1| GTP-binding protein TypA/BipA [Methylophaga thiooxydans DMS010]
Length = 609
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 460/596 (77%), Gaps = 4/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTF +++ + R+MDSN++E+ERGITI SKN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDQLLRQSGTFGEHEELTERVMDSNDLERERGITILSKNTAIRWNDY 73
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+D+ EGPMPQTRFVT+KAL LG KPIVV+N
Sbjct: 74 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDSAEGPMPQTRFVTQKALALGLKPIVVIN 133
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP+WV++ TFDLF L AT+EQLDF VIY S L+G+A + R G+M PLFE
Sbjct: 134 KIDKPSARPDWVLNQTFDLFVNLDATDEQLDFDVIYASGLNGFAGMDDSVRDGDMTPLFE 193
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
++ V + + P ++Q+ SL+Y+SY+G IG+GRI GRIK+ + +++ + K
Sbjct: 194 LVVDKVSPPDVDVDGPFRMQVSSLDYNSYVGVIGVGRIQRGRIKTNTPITVVD-REGKTR 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GL R V++A +GDI+ TG++ + I T+CD + LP L++DEPT+
Sbjct: 253 NGRVQQVMGFLGLQREEVSDAQAGDIIAFTGVDPLNISDTLCDQNAVEALPPLSVDEPTV 312
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP AG+EGKFITTRQIK RLD E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 313 TMTFQVNNSPFAGKEGKFITTRQIKERLDRELIHNVALRVDQVPTDPDKFKVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL VSRP VI + ++G EP+E + +D+E+ +QG +M+K+ RG +L
Sbjct: 373 SVLIENMRREGFELGVSRPEVIIREVDGVKEEPFEAVTIDVEDEHQGTVMEKMGERGAEL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL++ IPSRGLIGF+ EF+T T+GTGLI VF+ YAP S GKR
Sbjct: 433 RDMAPDGKGRVRLDFIIPSRGLIGFRTEFLTATQGTGLIYSVFDHYAPMKTGS---FGKR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKAVA++++ LQ+RGR+FI H D VYEGMIIGIHSRDNDL+VNP+K KQL
Sbjct: 490 INGVLIANGVGKAVAFAIFNLQERGRMFIGHGDEVYEGMIIGIHSRDNDLVVNPLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSD+A+ L+ PI+++LE A+EFI +DEL+E+TP+++RLRK+ L E+ERK+
Sbjct: 550 TNVRASGSDDAVTLVPPIRMSLEQALEFIGEDELLEVTPQSLRLRKKLLLEHERKR 605
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E +T+ + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDQLLRQSGTFGEHEELTERVMDSNDLERERGITILSKNTAIRWND 72
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V + +G MPQTR A G+ IV I
Sbjct: 73 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDSAEGPMPQTRFVTQKALALGLKPIVVI 132
Query: 176 NKIDK 180
NKIDK
Sbjct: 133 NKIDK 137
>gi|323143395|ref|ZP_08078080.1| GTP-binding protein TypA [Succinatimonas hippei YIT 12066]
gi|322416800|gb|EFY07449.1| GTP-binding protein TypA [Succinatimonas hippei YIT 12066]
Length = 612
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/595 (57%), Positives = 448/595 (75%), Gaps = 6/595 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + + R+MDSN IEKERGITI SKN +I +NG
Sbjct: 10 AIIAHVDHGKTTLVDKLLRQSGTLDRTELGQERVMDSNAIEKERGITILSKNTAINWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K DR ARP+WV+D FDLFD L AT+EQLDFPV+Y SAL G+A+ + + M PLFE
Sbjct: 130 KCDRPGARPDWVIDQVFDLFDNLGATDEQLDFPVVYASALAGWASLDESSHGDTMEPLFE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + N P Q+QI SL+++SY+G IG+GRI GR++S Q V I+N D
Sbjct: 190 TIIEKVSPPQADINGPFQMQISSLDFTSYVGVIGVGRITRGRVRSNQQVTIVNA-DGSTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ ++ Q+ + GL R V EA +GDI+ +TG+ E+ I TICD SK LP L +DEPT+
Sbjct: 249 QGRVGQVLGYLGLHRNEVEEAEAGDIIAVTGLGELKISDTICDNSKVEALPALTVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++NF VN SP AG+EGKFIT+R I+ RL E+ +N+ LRV +N D ++VSGRGELHL
Sbjct: 309 SMNFCVNTSPFAGKEGKFITSRNIEERLRQELVHNVALRV-ENTKDPDRFKVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIF-KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREGYEL VSRP VI K +G++ EPYE L +D+ E NQG +M++L R G+
Sbjct: 368 SVLIEQMRREGYELGVSRPEVILHKDESGKVLEPYEVLTLDLNEENQGPVMEELGRRKGE 427
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
LKN+ + K RVRL+YRIP+RGLIGFQ ++TLT GTGL+ H F+ Y F S +G+
Sbjct: 428 LKNMNPDGKGRVRLDYRIPARGLIGFQTLYMTLTSGTGLMYHTFDSYDAFAGGS---IGE 484
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKAV Y+LW LQ+RGRLF++ + VYEG IIG+H+R NDL VN +K K+
Sbjct: 485 RQNGVLISNDTGKAVPYALWFLQERGRLFVDAGEEVYEGQIIGLHNRSNDLTVNCLKTKK 544
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
LTN+R++GSD+ I L + ++LE A+EFIN+DELVE+TPK+IRLRK+FL + ER
Sbjct: 545 LTNVRAAGSDDNIILTPAVHMSLEQALEFINEDELVEVTPKSIRLRKKFLSDLER 599
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLRQSGTLDRTELGQERVMDSNAIEKERGITILSKNTAINWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 69 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLKPIVVI 128
Query: 176 NKIDK 180
NK D+
Sbjct: 129 NKCDR 133
>gi|120612037|ref|YP_971715.1| translation initiation factor IF-2 [Acidovorax citrulli AAC00-1]
gi|189028276|sp|A1TSK3.1|IF2_ACIAC RecName: Full=Translation initiation factor IF-2
gi|120590501|gb|ABM33941.1| bacterial translation initiation factor 2 (bIF-2) [Acidovorax
citrulli AAC00-1]
Length = 943
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/539 (60%), Positives = 434/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK+LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F +E
Sbjct: 378 MSIKASEVIKSLMKMGQMVTINQPLDQDTAMIVVEEMGHKAVVAALDDPEAFT-DEDVSG 436
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 437 QQAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGIVTF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 497 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAITKADK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++++V+PEEYGG SPF+ +S+KTG+GI+ LLE + LQAE+LELKAPV
Sbjct: 557 PDANPDRVKQELVAQEVVPEEYGGESPFVPVSSKTGMGIDDLLEQVLLQAEVLELKAPVE 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG + GR+R+ML+ENGK AGP
Sbjct: 617 AMAKGLVIEAQLDKGRGPVATVLVQSGTLKVGDVVLAGQTSGRVRAMLDENGKATKSAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K EN+F D+
Sbjct: 677 SIPVEIQGLSDVPQAGDEFMVLSDERRAREIATYRAGKFRNTKLAKQQAAKLENVFADMT 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VKNL IIIK DV GS+E L SL LSTD++++Q+++ VG I+ESD+NLAIASKAI
Sbjct: 737 AGEVKNLPIIIKADVQGSQEALAASLLKLSTDEIRVQLVYAGVGGISESDVNLAIASKAI 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RK A+ N++++ Y+NIIY+ + E+K+ ++ ++ E++E +G AEIR
Sbjct: 797 VIGFNVRADAGARKTAEANDVDLHYYNIIYDAVDELKAAMSGMLAPEQREEEIGTAEIRT 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG Y+ G + R+ + R+LR+ +I+TGE++S++R KD+VKEVK GFEC
Sbjct: 857 VFVASKIGTVAGSYVTSGQVTRNCRFRLLRDNVVIYTGEVESVRRLKDDVKEVKEGFEC 915
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RGI F
Sbjct: 450 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGIVTF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A G +V + K
Sbjct: 497 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAITK 553
Query: 1047 IDRSNARPEWV 1057
D+ +A P+ V
Sbjct: 554 ADKPDANPDRV 564
>gi|262170326|ref|ZP_06038004.1| GTP-binding protein TypA/BipA [Vibrio mimicus MB-451]
gi|261891402|gb|EEY37388.1| GTP-binding protein TypA/BipA [Vibrio mimicus MB-451]
Length = 609
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 193 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNALEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 431 KDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGGV---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 488 VNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 603
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|90020160|ref|YP_525987.1| regulatory protein TypA [Saccharophagus degradans 2-40]
gi|89949760|gb|ABD79775.1| GTP-binding protein TypA [Saccharophagus degradans 2-40]
Length = 608
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/608 (56%), Positives = 448/608 (73%), Gaps = 5/608 (0%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
+S +I L AIIAHVDHGKTTL+D LL+QSGT + RIMDSN+ EKERGITI
Sbjct: 1 MSLPDITKLRNVAIIAHVDHGKTTLVDKLLQQSGTLDRKDQGAERIMDSNDQEKERGITI 60
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+KN +I++N RINI+DTPGHADFGGEVER+LSMVD+V LL+DAV+GPMPQTRFVT KA
Sbjct: 61 LAKNTAIQWNDYRINIVDTPGHADFGGEVERVLSMVDSVCLLVDAVDGPMPQTRFVTSKA 120
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
+ G +PIVV+NKIDR ARP+WV+D FDLFD L ATEEQLDFPV+YTSAL+G A +
Sbjct: 121 FEKGLRPIVVINKIDRPGARPDWVMDQIFDLFDNLGATEEQLDFPVVYTSALNGIAGTDP 180
Query: 1094 KARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
+ +M PL++ I+ PV + + Q+Q+ +L Y SY+G IG+GRI G +K Q
Sbjct: 181 EKMSEDMTPLYQMIVDECPVPEVDPAGSFQMQVSALAYDSYVGVIGVGRITRGTLKPNQQ 240
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPN 1213
V++ + + K K K+ ++ + GL++V A +G+IV I GI+ + I T+CDP
Sbjct: 241 VIVKSA-NGKERKGKVLTVKGYLGLEQVETQLASAGEIVCINGIDGLSISDTLCDPENVE 299
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
LP L++DEPT+++NF+VN+SP AGREGKF+TTR IK+RLD E+ +N+ LRV Q D
Sbjct: 300 ALPALSVDEPTVSMNFIVNDSPFAGREGKFVTTRNIKDRLDQELIHNVALRVQQGDTPDK 359
Query: 1274 IYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGI 1333
+ VSGRGELHL++LIE MRREG+E+ VSRP VI K ++GE+ EPYEN+ +D+EE +QG
Sbjct: 360 -FIVSGRGELHLSVLIETMRREGFEMGVSRPEVIQKVVDGEVQEPYENVVIDVEEQHQGS 418
Query: 1334 IMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
IM++L R G+L N+E + K RVRLE+ PSRGLIGF+ F+T+T G+G+++ +F Y P
Sbjct: 419 IMEELGLRKGELTNMEPDGKGRVRLEFLTPSRGLIGFRGAFLTMTSGSGIMTSIFSHYGP 478
Query: 1394 FYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDN 1453
D+ R+NGVL+S GK AYSL+ LQ RGRLF+ H VYEG +IGIHSRDN
Sbjct: 479 V---KVGDVVSRQNGVLVSMVKGKTAAYSLFNLQSRGRLFLGHAVEVYEGQVIGIHSRDN 535
Query: 1454 DLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRF 1513
DL VNP K KQLTN+R+SG+DEA+ L+ PIK TLE A+EFI DDELVE+TP++IR+RK+
Sbjct: 536 DLAVNPTKGKQLTNVRASGTDEALTLVPPIKHTLEQALEFIEDDELVEVTPESIRIRKKL 595
Query: 1514 LKENERKK 1521
L E ERK+
Sbjct: 596 LTETERKR 603
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 100/240 (41%), Gaps = 26/240 (10%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + + I N IT L
Sbjct: 12 VAIIAHVDHGKTTLVDKLLQQSGTLDRKDQGAERIMDSNDQEKERGITILAKNTAIQWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V L+V A DG MPQTR + A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERVLSMVDSVCLLVDAVDGPMPQTRFVTSKAFEKGLRPIVVI 131
Query: 176 NKIDKLDINLDRIKQDLIS--EQVIPEEYGGASPFISISAKTGVG---INKLLENIS--L 228
NKID+ D + + + + E P + SA G+ K+ E+++
Sbjct: 132 NKIDRPGARPDWVMDQIFDLFDNLGATEEQLDFPVVYTSALNGIAGTDPEKMSEDMTPLY 191
Query: 229 QAEILELKAPVTTPAKGVIIE-SRL--DKGKGPVATVLIQSGTLRCSDIVVAGASYGRIR 285
Q + E P PA ++ S L D G + I GTL+ + V+ ++ G+ R
Sbjct: 192 QMIVDECPVPEVDPAGSFQMQVSALAYDSYVGVIGVGRITRGTLKPNQQVIVKSANGKER 251
>gi|258624617|ref|ZP_05719553.1| GTP-binding protein typA/bipA [Vibrio mimicus VM603]
gi|258583081|gb|EEW07894.1| GTP-binding protein typA/bipA [Vibrio mimicus VM603]
Length = 609
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATVVEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 193 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNTLEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 431 KDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGGV---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 488 VNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 603
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|262166748|ref|ZP_06034485.1| GTP-binding protein TypA/BipA [Vibrio mimicus VM223]
gi|262402028|ref|ZP_06078593.1| GTP-binding protein TypA/BipA [Vibrio sp. RC586]
gi|449144956|ref|ZP_21775766.1| GTP-binding protein TypA/BipA [Vibrio mimicus CAIM 602]
gi|262026464|gb|EEY45132.1| GTP-binding protein TypA/BipA [Vibrio mimicus VM223]
gi|262352000|gb|EEZ01131.1| GTP-binding protein TypA/BipA [Vibrio sp. RC586]
gi|449079274|gb|EMB50198.1| GTP-binding protein TypA/BipA [Vibrio mimicus CAIM 602]
Length = 609
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 193 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNTLEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 431 KDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGGV---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 488 VNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 603
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|349575068|ref|ZP_08886994.1| translation initiation factor IF2 [Neisseria shayeganii 871]
gi|348013389|gb|EGY52307.1| translation initiation factor IF2 [Neisseria shayeganii 871]
Length = 927
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/562 (59%), Positives = 444/562 (79%), Gaps = 4/562 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ LDQETA+I+VEEMGH+ + +DPE+FL + ++
Sbjct: 362 MAVKGVEVVKTLMKMGMMVTINQSLDQETALIVVEEMGHIGKPAAADDPEAFL-EDGAEH 420
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G +TF
Sbjct: 421 TEAELLPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVVTF 480
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 481 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 540
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+ +GG + F+ +SAK G+ I+ LLE + L+AE+LEL+APV
Sbjct: 541 DTANPERIRQELTQHEVIPDAWGGTTQFVDVSAKQGINIDALLEAVLLEAEVLELQAPVE 600
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G++R+M++ENGK I EAGP
Sbjct: 601 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKVRAMMDENGKPINEAGP 660
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 661 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 720
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + +NL +IIK DV GS E L SL+ LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 721 EGQAQNLSVIIKADVQGSYEALAGSLQKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 780
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRAD S RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE G EIRQ
Sbjct: 781 IIGFNVRADGSARKLAESEDVEIRYYNIIYDAIDDVKAAMSGMLAPEQKEQQTGTVEIRQ 840
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDSK+R++RN +I TGEL+SLKRFKD+VKEV+ GFEC
Sbjct: 841 VITVSKVGNIAGCMVTDGVVKRDSKVRLIRNNVVIHTGELESLKRFKDDVKEVRMGFECG 900
Query: 541 RLSRIENQI-QRDISEIIAFDI 561
+ + N I + D+ E+ FDI
Sbjct: 901 LMLKNHNDIMEGDVLEV--FDI 920
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 434 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVVTF------------ 480
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 481 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 537
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 538 IDKDTANPERI 548
>gi|258620383|ref|ZP_05715421.1| GTP-binding protein typA/bipA [Vibrio mimicus VM573]
gi|424809244|ref|ZP_18234625.1| GTP-binding protein TypA [Vibrio mimicus SX-4]
gi|258587262|gb|EEW11973.1| GTP-binding protein typA/bipA [Vibrio mimicus VM573]
gi|342323178|gb|EGU18963.1| GTP-binding protein TypA [Vibrio mimicus SX-4]
Length = 614
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 18 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 77
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 78 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 137
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 138 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGETGENMEPLFQ 197
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 198 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 256
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 257 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNALEALPPLSVDEPTV 316
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 317 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 375
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 376 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 435
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 436 KDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGGV---IGQR 492
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 493 VNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 552
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 553 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 608
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 17 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 76
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 77 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 136
Query: 176 NKIDK 180
NKID+
Sbjct: 137 NKIDR 141
>gi|229527331|ref|ZP_04416723.1| GTP-binding protein TypA/BipA [Vibrio cholerae 12129(1)]
gi|229334963|gb|EEO00448.1| GTP-binding protein TypA/BipA [Vibrio cholerae 12129(1)]
Length = 609
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGETGDNMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 193 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNALEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 431 KDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHSFDHYGPHKGGV---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 488 VNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 603
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|325981566|ref|YP_004293968.1| translation initiation factor IF-2 [Nitrosomonas sp. AL212]
gi|325531085|gb|ADZ25806.1| translation initiation factor IF-2 [Nitrosomonas sp. AL212]
Length = 884
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/539 (62%), Positives = 443/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMK+G MVTINQ+LDQ+TAMI+VEEMGH A ++L++PE+FL + +
Sbjct: 320 MSVKAADVIKVLMKMGSMVTINQMLDQDTAMIVVEEMGHTAKYAELDNPETFLADRESSI 379
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE + RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T+HG ITF
Sbjct: 380 TEAELVARAPVVTVMGHVDHGKTSLLDYIRRTRVAGGEAGGITQHIGAYHVETDHGMITF 439
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARG K+TDIV+LVVAADDGVMPQT EAI HAK + +P+IVAINKIDK
Sbjct: 440 LDTPGHEAFTAMRARGTKITDIVILVVAADDGVMPQTIEAIHHAKAAKLPIIVAINKIDK 499
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +RI+Q+LI+ +V+PEE+GG + F+++SAKTG GI+ LLE I LQAE+LELKAPV
Sbjct: 500 PDANTERIRQELIAHEVLPEEWGGDTMFVAVSAKTGQGIDTLLETILLQAEVLELKAPVN 559
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
TPAKGV+IESRLDKG+GPVAT+L+QSG L+ D ++AGA +G++R+M +ENGK I +AG
Sbjct: 560 TPAKGVVIESRLDKGRGPVATILVQSGMLKRGDALLAGAVFGKVRAMNDENGKAIKQAGT 619
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GE + + +E+KAREI LFRQGK+RDVKL+KQ+ K EN+F+
Sbjct: 620 SIPVEIQGLSEVPEAGETVLALDDERKAREIALFRQGKYRDVKLAKQQAAKLENVFD--Q 677
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+E VK L +IIK DV GS L +L+ L+TD+VK+ +IH+AVG I ESD+NL++ASKA+
Sbjct: 678 QEDVKILSLIIKADVQGSCGALAYALQKLATDEVKVNIIHSAVGAIIESDVNLSLASKAV 737
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RKL N +++RY+NIIY ++EIK+ ++ L+ E+KE++LGL +IR+
Sbjct: 738 IIGFNVRADAGARKLIASNGVDVRYYNIIYEAVEEIKAALSGLMSPERKESILGLIDIRE 797
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ + KV +AGCY+L+G+++R+S +R+LR+ +I + ELDSLKRFKD+VKEV+ GFEC
Sbjct: 798 IYRIPKVGAVAGCYVLDGIVKRNSLVRVLRDGLVIHSCELDSLKRFKDDVKEVREGFEC 856
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R R+ + GIT +E +
Sbjct: 393 VMGHVDHGKTSLLDYIRR------------TRVAGG----EAGGITQHIGAYHVETDHGM 436
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGH F R + D V+L++ A +G MPQT A IV +NK
Sbjct: 437 ITFLDTPGHEAFTAMRARGTKITDIVILVVAADDGVMPQTIEAIHHAKAAKLPIIVAINK 496
Query: 1047 IDRSNARPEWV 1057
ID+ +A E +
Sbjct: 497 IDKPDANTERI 507
>gi|15642737|ref|NP_232370.1| GTP-binding protein TypA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586583|ref|ZP_01676368.1| GTP-binding protein TypA [Vibrio cholerae 2740-80]
gi|147675093|ref|YP_001218231.1| GTP-binding protein TypA [Vibrio cholerae O395]
gi|153212583|ref|ZP_01948330.1| GTP-binding protein TypA [Vibrio cholerae 1587]
gi|153802923|ref|ZP_01957509.1| GTP-binding protein TypA [Vibrio cholerae MZO-3]
gi|153817432|ref|ZP_01970099.1| GTP-binding protein TypA [Vibrio cholerae NCTC 8457]
gi|153821256|ref|ZP_01973923.1| GTP-binding protein TypA [Vibrio cholerae B33]
gi|153825515|ref|ZP_01978182.1| GTP-binding protein TypA [Vibrio cholerae MZO-2]
gi|153828336|ref|ZP_01981003.1| GTP-binding protein TypA [Vibrio cholerae 623-39]
gi|227082858|ref|YP_002811409.1| GTP-binding protein TypA [Vibrio cholerae M66-2]
gi|227119180|ref|YP_002821076.1| GTP-binding protein TypA [Vibrio cholerae O395]
gi|229513671|ref|ZP_04403135.1| GTP-binding protein TypA/BipA [Vibrio cholerae TMA 21]
gi|229524721|ref|ZP_04414126.1| GTP-binding protein TypA/BipA [Vibrio cholerae bv. albensis VL426]
gi|254225458|ref|ZP_04919069.1| GTP-binding protein TypA [Vibrio cholerae V51]
gi|254285938|ref|ZP_04960900.1| GTP-binding protein TypA [Vibrio cholerae AM-19226]
gi|255743713|ref|ZP_05417672.1| GTP-binding protein TypA/BipA [Vibrio cholera CIRS 101]
gi|262170016|ref|ZP_06037705.1| GTP-binding protein TypA/BipA [Vibrio cholerae RC27]
gi|360036613|ref|YP_004938376.1| GTP-binding protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|379742515|ref|YP_005334484.1| GTP-binding protein TypA/BipA [Vibrio cholerae IEC224]
gi|417814750|ref|ZP_12461402.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-49A2]
gi|417818488|ref|ZP_12465115.1| GTP-binding protein TypA/BipA [Vibrio cholerae HCUF01]
gi|417822053|ref|ZP_12468665.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE39]
gi|417825967|ref|ZP_12472553.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE48]
gi|418335728|ref|ZP_12944636.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-06A1]
gi|418339145|ref|ZP_12948038.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-23A1]
gi|418347267|ref|ZP_12952019.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-28A1]
gi|418351023|ref|ZP_12955753.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-43A1]
gi|418356464|ref|ZP_12959182.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-61A1]
gi|419827673|ref|ZP_14351170.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1033(6)]
gi|419831171|ref|ZP_14354654.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-1A2]
gi|419834858|ref|ZP_14358311.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-61A2]
gi|419838432|ref|ZP_14361868.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-46B1]
gi|421318694|ref|ZP_15769261.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1032(5)]
gi|421322481|ref|ZP_15773032.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1038(11)]
gi|421326277|ref|ZP_15776800.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1041(14)]
gi|421329936|ref|ZP_15780445.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1042(15)]
gi|421333894|ref|ZP_15784370.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1046(19)]
gi|421337436|ref|ZP_15787896.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1048(21)]
gi|421340857|ref|ZP_15791288.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-20A2]
gi|421344799|ref|ZP_15795201.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-43B1]
gi|421348526|ref|ZP_15798902.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-46A1]
gi|421352441|ref|ZP_15802805.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-25]
gi|421356347|ref|ZP_15806677.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-45]
gi|422897823|ref|ZP_16935259.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-40A1]
gi|422904028|ref|ZP_16938987.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-48A1]
gi|422907906|ref|ZP_16942698.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-70A1]
gi|422914745|ref|ZP_16949248.1| GTP-binding protein TypA/BipA [Vibrio cholerae HFU-02]
gi|422918576|ref|ZP_16952887.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-02A1]
gi|422924029|ref|ZP_16957165.1| GTP-binding protein TypA/BipA [Vibrio cholerae BJG-01]
gi|422926951|ref|ZP_16959961.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-38A1]
gi|423146272|ref|ZP_17133864.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-19A1]
gi|423150976|ref|ZP_17138262.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-21A1]
gi|423154783|ref|ZP_17141946.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-22A1]
gi|423157850|ref|ZP_17144941.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-32A1]
gi|423161422|ref|ZP_17148359.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-33A2]
gi|423166253|ref|ZP_17152967.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-48B2]
gi|423732282|ref|ZP_17705582.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-17A1]
gi|423736394|ref|ZP_17709581.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-41B1]
gi|423774194|ref|ZP_17713846.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-50A2]
gi|423823471|ref|ZP_17717477.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-55C2]
gi|423857431|ref|ZP_17721278.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-59A1]
gi|423885268|ref|ZP_17724870.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-60A1]
gi|423897328|ref|ZP_17727887.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-62A1]
gi|423932547|ref|ZP_17732282.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-77A1]
gi|423960205|ref|ZP_17735770.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-40]
gi|423986016|ref|ZP_17739326.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-46]
gi|423998993|ref|ZP_17742241.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-02C1]
gi|424003697|ref|ZP_17746770.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-17A2]
gi|424007492|ref|ZP_17750459.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-37A1]
gi|424010728|ref|ZP_17753658.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-44C1]
gi|424017896|ref|ZP_17757720.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-55B2]
gi|424020983|ref|ZP_17760761.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-59B1]
gi|424025472|ref|ZP_17765120.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-62B1]
gi|424028355|ref|ZP_17767955.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-69A1]
gi|424587638|ref|ZP_18027215.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1030(3)]
gi|424592437|ref|ZP_18031859.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1037(10)]
gi|424596296|ref|ZP_18035613.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1040(13)]
gi|424600202|ref|ZP_18039379.1| GTP-binding protein TypA/BipA [Vibrio Cholerae CP1044(17)]
gi|424602960|ref|ZP_18042098.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1047(20)]
gi|424607903|ref|ZP_18046841.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1050(23)]
gi|424611714|ref|ZP_18050551.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-39A1]
gi|424614544|ref|ZP_18053327.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-41A1]
gi|424618510|ref|ZP_18057179.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-42A1]
gi|424623298|ref|ZP_18061800.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-47A1]
gi|424626199|ref|ZP_18064656.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-50A1]
gi|424630679|ref|ZP_18068959.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-51A1]
gi|424634727|ref|ZP_18072823.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-52A1]
gi|424637806|ref|ZP_18075809.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-55A1]
gi|424641708|ref|ZP_18079586.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-56A1]
gi|424646259|ref|ZP_18083992.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-56A2]
gi|424649781|ref|ZP_18087439.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-57A1]
gi|424654025|ref|ZP_18091402.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-57A2]
gi|424657843|ref|ZP_18095126.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-81A2]
gi|429884807|ref|ZP_19366415.1| GTP-binding protein TypA/BipA [Vibrio cholerae PS15]
gi|443505071|ref|ZP_21072022.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-64A1]
gi|443508977|ref|ZP_21075731.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-65A1]
gi|443512815|ref|ZP_21079447.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-67A1]
gi|443516377|ref|ZP_21082880.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-68A1]
gi|443520168|ref|ZP_21086554.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-71A1]
gi|443525059|ref|ZP_21091260.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-72A2]
gi|443528869|ref|ZP_21094900.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-78A1]
gi|443532639|ref|ZP_21098652.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-7A1]
gi|443536455|ref|ZP_21102320.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-80A1]
gi|443539988|ref|ZP_21105840.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-81A1]
gi|9657342|gb|AAF95883.1| GTP-binding protein TypA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121549142|gb|EAX59175.1| GTP-binding protein TypA [Vibrio cholerae 2740-80]
gi|124116454|gb|EAY35274.1| GTP-binding protein TypA [Vibrio cholerae 1587]
gi|124121536|gb|EAY40279.1| GTP-binding protein TypA [Vibrio cholerae MZO-3]
gi|125622092|gb|EAZ50415.1| GTP-binding protein TypA [Vibrio cholerae V51]
gi|126512018|gb|EAZ74612.1| GTP-binding protein TypA [Vibrio cholerae NCTC 8457]
gi|126521188|gb|EAZ78411.1| GTP-binding protein TypA [Vibrio cholerae B33]
gi|146316976|gb|ABQ21515.1| GTP-binding protein TypA [Vibrio cholerae O395]
gi|148876166|gb|EDL74301.1| GTP-binding protein TypA [Vibrio cholerae 623-39]
gi|149740800|gb|EDM54891.1| GTP-binding protein TypA [Vibrio cholerae MZO-2]
gi|150424120|gb|EDN16059.1| GTP-binding protein TypA [Vibrio cholerae AM-19226]
gi|227010746|gb|ACP06958.1| GTP-binding protein TypA [Vibrio cholerae M66-2]
gi|227014630|gb|ACP10840.1| GTP-binding protein TypA [Vibrio cholerae O395]
gi|229338302|gb|EEO03319.1| GTP-binding protein TypA/BipA [Vibrio cholerae bv. albensis VL426]
gi|229349548|gb|EEO14504.1| GTP-binding protein TypA/BipA [Vibrio cholerae TMA 21]
gi|255738643|gb|EET94029.1| GTP-binding protein TypA/BipA [Vibrio cholera CIRS 101]
gi|262021424|gb|EEY40136.1| GTP-binding protein TypA/BipA [Vibrio cholerae RC27]
gi|340035309|gb|EGQ96290.1| GTP-binding protein TypA/BipA [Vibrio cholerae HCUF01]
gi|340035560|gb|EGQ96540.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-49A2]
gi|340035637|gb|EGQ96616.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE39]
gi|340045371|gb|EGR06315.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE48]
gi|341619363|gb|EGS45217.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-48A1]
gi|341619773|gb|EGS45576.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-70A1]
gi|341620231|gb|EGS46009.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-40A1]
gi|341634973|gb|EGS59705.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-02A1]
gi|341636040|gb|EGS60745.1| GTP-binding protein TypA/BipA [Vibrio cholerae HFU-02]
gi|341642781|gb|EGS67084.1| GTP-binding protein TypA/BipA [Vibrio cholerae BJG-01]
gi|341645436|gb|EGS69584.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-38A1]
gi|356416321|gb|EHH69957.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-06A1]
gi|356416354|gb|EHH69986.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-21A1]
gi|356421575|gb|EHH75071.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-19A1]
gi|356427131|gb|EHH80385.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-22A1]
gi|356429188|gb|EHH82407.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-28A1]
gi|356429438|gb|EHH82656.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-23A1]
gi|356438519|gb|EHH91536.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-32A1]
gi|356443199|gb|EHH96027.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-33A2]
gi|356443915|gb|EHH96733.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-43A1]
gi|356448827|gb|EHI01589.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-48B2]
gi|356451678|gb|EHI04361.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-61A1]
gi|356647767|gb|AET27822.1| GTP-binding protein [Vibrio cholerae O1 str. 2010EL-1786]
gi|378796025|gb|AFC59496.1| GTP-binding protein TypA/BipA [Vibrio cholerae IEC224]
gi|395915607|gb|EJH26441.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1032(5)]
gi|395915935|gb|EJH26767.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1041(14)]
gi|395917030|gb|EJH27859.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1038(11)]
gi|395926917|gb|EJH37686.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1042(15)]
gi|395927256|gb|EJH38020.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1046(19)]
gi|395930464|gb|EJH41212.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1048(21)]
gi|395938844|gb|EJH49531.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-20A2]
gi|395938882|gb|EJH49568.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-43B1]
gi|395940890|gb|EJH51570.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-46A1]
gi|395949461|gb|EJH60087.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-45]
gi|395949841|gb|EJH60461.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-25]
gi|395957341|gb|EJH67901.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-56A2]
gi|395957754|gb|EJH68278.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-57A2]
gi|395960346|gb|EJH70719.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-42A1]
gi|395969735|gb|EJH79576.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-47A1]
gi|395971682|gb|EJH81319.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1030(3)]
gi|395973873|gb|EJH83418.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1047(20)]
gi|408005734|gb|EKG43924.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-39A1]
gi|408010013|gb|EKG47892.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-41A1]
gi|408010390|gb|EKG48251.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-50A1]
gi|408016604|gb|EKG54140.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-52A1]
gi|408021605|gb|EKG58848.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-56A1]
gi|408021805|gb|EKG59040.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-55A1]
gi|408029479|gb|EKG66203.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1037(10)]
gi|408030061|gb|EKG66740.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1040(13)]
gi|408030671|gb|EKG67324.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-57A1]
gi|408040241|gb|EKG76440.1| GTP-binding protein TypA/BipA [Vibrio Cholerae CP1044(17)]
gi|408041232|gb|EKG77351.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1050(23)]
gi|408051321|gb|EKG86414.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-81A2]
gi|408052657|gb|EKG87686.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-51A1]
gi|408606821|gb|EKK80244.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1033(6)]
gi|408619369|gb|EKK92403.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-1A2]
gi|408621790|gb|EKK94784.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-17A1]
gi|408628693|gb|EKL01422.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-41B1]
gi|408632369|gb|EKL04829.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-50A2]
gi|408634109|gb|EKL06383.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-55C2]
gi|408639392|gb|EKL11209.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-59A1]
gi|408639657|gb|EKL11466.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-60A1]
gi|408648647|gb|EKL19987.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-61A2]
gi|408653376|gb|EKL24549.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-77A1]
gi|408653981|gb|EKL25130.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-62A1]
gi|408655707|gb|EKL26820.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-40]
gi|408663127|gb|EKL34013.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-46]
gi|408843879|gb|EKL84020.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-37A1]
gi|408844801|gb|EKL84925.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-17A2]
gi|408851964|gb|EKL91817.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-02C1]
gi|408855466|gb|EKL95168.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-46B1]
gi|408858257|gb|EKL97935.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-55B2]
gi|408862684|gb|EKM02189.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-44C1]
gi|408865982|gb|EKM05372.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-59B1]
gi|408869324|gb|EKM08623.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-62B1]
gi|408878209|gb|EKM17223.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-69A1]
gi|429228401|gb|EKY34322.1| GTP-binding protein TypA/BipA [Vibrio cholerae PS15]
gi|443430794|gb|ELS73353.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-64A1]
gi|443434626|gb|ELS80779.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-65A1]
gi|443438457|gb|ELS88178.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-67A1]
gi|443442333|gb|ELS95643.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-68A1]
gi|443446412|gb|ELT03078.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-71A1]
gi|443449091|gb|ELT09394.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-72A2]
gi|443452905|gb|ELT16741.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-78A1]
gi|443456813|gb|ELT24211.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-7A1]
gi|443460597|gb|ELT31683.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-80A1]
gi|443464672|gb|ELT39334.1| GTP-binding protein TypA/BipA [Vibrio cholerae HC-81A1]
Length = 609
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 193 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNALEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 431 KDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHSFDHYGPHKGGV---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 488 VNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 603
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|422911555|ref|ZP_16946177.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-09]
gi|424661234|ref|ZP_18098480.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-16]
gi|341631306|gb|EGS56207.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-09]
gi|408049454|gb|EKG84661.1| GTP-binding protein TypA/BipA [Vibrio cholerae HE-16]
Length = 609
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/596 (57%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 193 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNALEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEATEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRLDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 NNGVLIANAAGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMTLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 603
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|393762975|ref|ZP_10351598.1| BipA protein [Alishewanella agri BL06]
gi|392605892|gb|EIW88780.1| BipA protein [Alishewanella agri BL06]
Length = 611
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL+QSGT + RIMDSN E ERGITI +KN S+ +NG
Sbjct: 15 AIIAHVDHGKTTMVDRLLQQSGTLDSRAKLQERIMDSNAQESERGITILAKNTSVRWNGY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER+LSM D+VLLL+DAVEGPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 QINILDTPGHADFGGEVERVLSMADSVLLLVDAVEGPMPQTRFVTQKAFAHGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+D+ AR WV+D FDLFD L A++EQLDFP++Y S L+G+A+ + ++ ++ LFE
Sbjct: 135 KVDKPGARVNWVIDQVFDLFDNLGASDEQLDFPIVYASGLNGWASLEADVKKDDITDLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYV K Q+Q+ L+YSSYLG IGIGRI G +K Q V I+ G D
Sbjct: 195 AIVKYVEPPKVELEGETQVQVSQLDYSSYLGIIGIGRIKRGTLKPNQQVTII-GADGSKR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+R EA +GDIV TG+ E+ I TIC SK LP L +DEPT+
Sbjct: 254 NGKVGQVFGYLGLERHETLEATAGDIVAFTGLGELKISDTICATSKVEALPALQVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+RQI RL++E+K+N+ LRV + + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKFVTSRQILERLNNELKHNVALRVEETEDGDK-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+LIENMRREG+EL+VSRP VI KT++G EP+E + +D+EE +QG IM+K+ R ++
Sbjct: 373 GVLIENMRREGFELAVSRPEVIMKTIDGVKQEPFEVVTIDVEEQHQGSIMEKMGERKAEM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K R+R+++ +PSRGLIGF+ EF+TLT GTGL+ H F+ Y F ++G+R
Sbjct: 433 TDMQPDGKGRIRMDFVMPSRGLIGFRTEFMTLTSGTGLMYHTFDHYGDFKGG---NIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+AY+L+ LQ+RGRLF +H D VYEG IIGIHSR NDL VN +K KQL
Sbjct: 490 NNGVLISNATGKALAYALFTLQERGRLFTSHADEVYEGQIIGIHSRSNDLTVNCLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++G+DEA+ L PIK+TLE A+EFI+DDELVE+TPK+IR+RK+FL ENERK+
Sbjct: 550 TNIRAAGTDEALTLTPPIKLTLESALEFIDDDELVEVTPKSIRIRKKFLTENERKR 605
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDY-----------------IRKTNVVFSEAGGI 102
++TA S+ + + I+ HVDHGKT+++D I +N SE G I
Sbjct: 2 SVTASSIDKLRNIAIIAHVDHGKTTMVDRLLQQSGTLDSRAKLQERIMDSNAQESERG-I 60
Query: 103 TQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIA 162
T +V N I LDTPGH F R + D V+L+V A +G MPQTR
Sbjct: 61 TILAKNTSVRWNGYQINILDTPGHADFGGEVERVLSMADSVLLLVDAVEGPMPQTRFVTQ 120
Query: 163 HAKISGVPLIVAINKIDK 180
A G+ IV INK+DK
Sbjct: 121 KAFAHGLKPIVVINKVDK 138
>gi|422349683|ref|ZP_16430572.1| translation initiation factor IF-2 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404657892|gb|EKB30772.1| translation initiation factor IF-2 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 949
Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/539 (61%), Positives = 434/539 (80%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK LMK+GQMVTINQ+LDQ+TAM++VEEMGH A A+K +DPE+ +L E +N
Sbjct: 385 MAVKATEVIKTLMKMGQMVTINQMLDQDTAMLIVEEMGHKAVAAKPDDPEA-ILGEL-QN 442
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ +L R P+VTIMGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 443 VEYPALPRPPVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVKTPRGIVTF 502
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TD+V+LVVAADDGVMPQT+EAIAH++ +GVPL+VAINKIDK
Sbjct: 503 LDTPGHEAFTAMRARGAQATDVVILVVAADDGVMPQTKEAIAHSRAAGVPLVVAINKIDK 562
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +R+KQ+L++ V+PEE+GG PF +SAKTG G+++LLEN+ LQAE+LELKAPV
Sbjct: 563 PEANPERVKQELVANDVMPEEWGGDVPFCPVSAKTGAGVDELLENVLLQAEMLELKAPVE 622
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA G++IESRLDKG+GPVA++L+Q GTL DIV+ G +GR+R+M+NE GK AGP
Sbjct: 623 GPAHGIVIESRLDKGRGPVASILVQGGTLHRGDIVLVGQEFGRVRAMINELGKAQQAAGP 682
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +G+E+ V+ +E+KAREI LFRQGK+RD KL+KQ N+F+ N
Sbjct: 683 SIPVEIQGLSGVPAAGDEVIVLNDERKAREISLFRQGKYRDQKLAKQHATNLANLFSGAN 742
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LSTD+V++QV+H AVG I+ESD+NLA AS A+
Sbjct: 743 EGEVKTLPLIIKADVQGSQEALIHALTKLSTDEVRVQVVHAAVGGISESDVNLAAASSAV 802
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RK+A+ I+IRY+NIIY+ + ++K+ + ++ E++E LGL EIRQ
Sbjct: 803 IIGFNVRADAQARKVAETEGIDIRYYNIIYDAVDDVKAALGGMLSPERRETSLGLLEIRQ 862
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+I V KV IAGC +LEG++RR++ +R+LR+ +IWTGEL SLK FKD+V+EV+AG EC
Sbjct: 863 IIRVPKVGNIAGCRVLEGVVRRNASVRLLRDNVVIWTGELASLKHFKDDVREVQAGQEC 921
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+L+D++ R + I I + ++ RGI F
Sbjct: 456 IMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVKTPRGIVTF------------ 502
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + G +V +NK
Sbjct: 503 ---LDTPGHEAFTAMRARGAQATDVVILVVAADDGVMPQTKEAIAHSRAAGVPLVVAINK 559
Query: 1047 IDRSNARPEWV 1057
ID+ A PE V
Sbjct: 560 IDKPEANPERV 570
>gi|326316666|ref|YP_004234338.1| translation initiation factor IF-2 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323373502|gb|ADX45771.1| translation initiation factor IF-2 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 946
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/539 (60%), Positives = 433/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK+LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F +E
Sbjct: 381 MSIKASEVIKSLMKMGQMVTINQPLDQDTAMIVVEEMGHKAVVAALDDPEAFT-DEDVSG 439
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 440 QQAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGIVTF 499
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK + VP++VAI K DK
Sbjct: 500 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAKVPIVVAITKADK 559
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L++++V+PEEYGG SPF+ +S+KTG+GI+ LLE + LQAE+LELKAPV
Sbjct: 560 PDANPDRVKQELVAQEVVPEEYGGESPFVPVSSKTGMGIDDLLEQVLLQAEVLELKAPVE 619
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG + GR+R+ML+ENGK AGP
Sbjct: 620 AMAKGLVIEAQLDKGRGPVATVLVQSGTLKVGDVVLAGQTSGRVRAMLDENGKATKSAGP 679
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K EN+F D+
Sbjct: 680 SIPVEIQGLSDVPQAGDEFMVLSDERRAREIATYRAGKFRNTKLAKQQAAKLENVFADMT 739
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VKNL IIIK DV GS+E L SL LSTD++++Q+++ VG I+ESD+NLAIASKAI
Sbjct: 740 AGEVKNLPIIIKADVQGSQEALAASLLKLSTDEIRVQLVYAGVGGISESDVNLAIASKAI 799
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RK A+ N++++ Y+NIIY+ + E+K+ ++ ++ E++E +G AEIR
Sbjct: 800 VIGFNVRADAGARKTAEANDVDLHYYNIIYDAVDELKAAMSGMLAPEQREEEIGTAEIRT 859
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG Y+ G + R+ + R+LR+ +I+TGE++S++R KD+VKEVK GFEC
Sbjct: 860 VFVASKIGTVAGSYVTSGQVTRNCRFRLLRDNVVIYTGEVESVRRLKDDVKEVKEGFEC 918
Score = 63.9 bits (154), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RGI F
Sbjct: 453 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGIVTF------------ 499
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A +V + K
Sbjct: 500 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAKVPIVVAITK 556
Query: 1047 IDRSNARPEWV 1057
D+ +A P+ V
Sbjct: 557 ADKPDANPDRV 567
>gi|121726693|ref|ZP_01679918.1| GTP-binding protein TypA [Vibrio cholerae V52]
gi|229509870|ref|ZP_04399351.1| GTP-binding protein TypA/BipA [Vibrio cholerae B33]
gi|229516991|ref|ZP_04406437.1| GTP-binding protein TypA/BipA [Vibrio cholerae RC9]
gi|229521817|ref|ZP_04411235.1| GTP-binding protein TypA/BipA [Vibrio cholerae TM 11079-80]
gi|229606715|ref|YP_002877363.1| GTP-binding protein TypA/BipA [Vibrio cholerae MJ-1236]
gi|254851281|ref|ZP_05240631.1| GTP-binding protein TypA [Vibrio cholerae MO10]
gi|262158591|ref|ZP_06029706.1| GTP-binding protein TypA/BipA [Vibrio cholerae INDRE 91/1]
gi|262191242|ref|ZP_06049439.1| GTP-binding protein TypA/BipA [Vibrio cholerae CT 5369-93]
gi|384425658|ref|YP_005635016.1| GTP-binding protein TypA/BipA [Vibrio cholerae LMA3984-4]
gi|440710958|ref|ZP_20891605.1| GTP-binding protein TypA/BipA [Vibrio cholerae 4260B]
gi|449054832|ref|ZP_21733500.1| GTP-binding protein TypA/BipA [Vibrio cholerae O1 str. Inaba G4222]
gi|121630854|gb|EAX63236.1| GTP-binding protein TypA [Vibrio cholerae V52]
gi|229341411|gb|EEO06415.1| GTP-binding protein TypA/BipA [Vibrio cholerae TM 11079-80]
gi|229346054|gb|EEO11026.1| GTP-binding protein TypA/BipA [Vibrio cholerae RC9]
gi|229353344|gb|EEO18283.1| GTP-binding protein TypA/BipA [Vibrio cholerae B33]
gi|229369370|gb|ACQ59793.1| GTP-binding protein TypA/BipA [Vibrio cholerae MJ-1236]
gi|254846986|gb|EET25400.1| GTP-binding protein TypA [Vibrio cholerae MO10]
gi|262029752|gb|EEY48401.1| GTP-binding protein TypA/BipA [Vibrio cholerae INDRE 91/1]
gi|262032876|gb|EEY51417.1| GTP-binding protein TypA/BipA [Vibrio cholerae CT 5369-93]
gi|327485211|gb|AEA79618.1| GTP-binding protein TypA/BipA [Vibrio cholerae LMA3984-4]
gi|439973691|gb|ELP49904.1| GTP-binding protein TypA/BipA [Vibrio cholerae 4260B]
gi|448265450|gb|EMB02684.1| GTP-binding protein TypA/BipA [Vibrio cholerae O1 str. Inaba G4222]
Length = 614
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 18 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 77
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 78 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 137
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 138 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGETGENMEPLFQ 197
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 198 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 256
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 257 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNALEALPPLSVDEPTV 316
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 317 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 375
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 376 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 435
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 436 KDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHSFDHYGPHKGGV---IGQR 492
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 493 VNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 552
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 553 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 608
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 17 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 76
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 77 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 136
Query: 176 NKIDK 180
NKID+
Sbjct: 137 NKIDR 141
>gi|422308674|ref|ZP_16395821.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1035(8)]
gi|408617037|gb|EKK90166.1| GTP-binding protein TypA/BipA [Vibrio cholerae CP1035(8)]
Length = 609
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGEMGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 193 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNALEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 431 KDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHSFDHYGPHKGGV---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 488 VNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 603
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|285017350|ref|YP_003375061.1| GTP-binding elongation factor protein [Xanthomonas albilineans GPE
PC73]
gi|283472568|emb|CBA15073.1| probable gtp-binding elongation factor protein [Xanthomonas
albilineans GPE PC73]
Length = 609
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/600 (57%), Positives = 449/600 (74%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWRGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFKPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFDKL AT EQLDFP++YTSAL+GYA R G+M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDKLGATNEQLDFPIVYTSALNGYAGLEDSVRDGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++ P + + + P Q++I L+Y++++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMRHAPKPEVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGVLKKNMPVSVID-REGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ + A +GDIV I+GI+E+ I T+C P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFLGLERIEQDSAQAGDIVAISGIQELTISDTVCALDTPEALPPLTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+K+RL+ E +N+ L+V Q + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLKDRLERETVHNVALKVQQLEDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREG+EL+VSRP VI K ++G+L EP E L VDIEE +QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGFELAVSRPEVIIKEIDGKLMEPVEQLVVDIEEQHQGGVMEKLGIR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLDYMIPARGLIGFQNEFRTLTQGSGLLFHVFDHYGP---KEQGA 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR+NGV+I+ G AY+L L++RGRLF D VYEG ++GIHS+DNDL VN IK
Sbjct: 485 IAKRQNGVMIANAPGATPAYALGPLEERGRLFAAEGDNVYEGQLVGIHSKDNDLTVNAIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+ I+L IK TLE A++FI DDELVE+TPK IRLRK+ L ENERK+
Sbjct: 545 TKPLTNMRASGKDDTIKLTPAIKYTLEQALDFIEDDELVEVTPKEIRLRKKHLTENERKR 604
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + + N ++ + +IT+
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWRG 68
Query: 121 -----LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+DTPGH F R + D V+++V A DG MPQTR A G IV +
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|372271495|ref|ZP_09507543.1| stress response membrane GTPase [Marinobacterium stanieri S30]
Length = 603
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/601 (55%), Positives = 459/601 (76%), Gaps = 15/601 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + RIMDSN+ E+ERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGRRDEGAERIMDSNDQERERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A ++ +A +M PLFE
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFPIVYASALNGIAGDDPEAMADDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + + P Q+QI +L+Y+SY G IG+GR+ G +K+ V +++ +
Sbjct: 189 AIVKHVDAPHVDVDGPFQMQISALDYNSYTGVIGVGRVSRGSVKTNTQVKVID------S 242
Query: 1166 KAKINQIRVFK-----GLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
AK+ RV K GL+RV V+ A +GDI+ ITG++E+ I T+CDP LP L++
Sbjct: 243 HAKVRNGRVLKIMGYHGLERVEVDSAQAGDIICITGLDELNISDTLCDPEVIEALPALSV 302
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT+++ F VN+SP AG+EGKFIT+R IK+RLD E+ +N+ LRV + + VSGR
Sbjct: 303 DEPTVSMTFQVNDSPFAGQEGKFITSRNIKDRLDRELIHNVALRVEPGDTPEK-FRVSGR 361
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY 1340
GELHL++LIE+MRREG+EL VSRP VI K ++GE++EPYE + +D+EE +QG ++++L
Sbjct: 362 GELHLSVLIESMRREGFELGVSRPEVIQKEVDGEIHEPYEVVMIDVEEDHQGSVIEELGK 421
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R D+ N+E++ K RVRL + +PSRGLIGF+++F+T+T GTG+++ +F+ Y P +
Sbjct: 422 RKADMTNMEVDGKGRVRLTFMMPSRGLIGFRSQFMTMTSGTGIMTSIFDHYGPV---KQG 478
Query: 1401 DLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPI 1460
D+ R NGVL+S +GKA+ Y+L+ LQ+RGRLFI+ N VYEGM++GIHSR+NDL+VNP
Sbjct: 479 DVVSRHNGVLVSMVNGKALGYALFTLQERGRLFIDPNIEVYEGMVLGIHSRNNDLVVNPT 538
Query: 1461 KEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
K KQLTN+R+SG+DE I L PIK +LE A++FI DDELVE+TP++IR+RK+ LKENERK
Sbjct: 539 KGKQLTNVRASGTDENIVLTPPIKYSLEQALDFIEDDELVEVTPESIRIRKKLLKENERK 598
Query: 1521 K 1521
+
Sbjct: 599 R 599
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGRRDEGAERIMDSNDQERERGITILAKNTAIKWND 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|410629885|ref|ZP_11340580.1| GTP-binding protein TypA/BipA [Glaciecola arctica BSs20135]
gi|410150508|dbj|GAC17447.1| GTP-binding protein TypA/BipA [Glaciecola arctica BSs20135]
Length = 614
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/597 (56%), Positives = 447/597 (74%), Gaps = 5/597 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQN-INARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT +++ R+MDSN+IEKERGITI +KN +I++N
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTLEESRGEAEERVMDSNDIEKERGITILAKNTAIKWND 74
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+
Sbjct: 75 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 134
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NKID+ ARP+WV+D FDLFD L AT++QLDF V+Y SA++G+A + +M PLF
Sbjct: 135 NKIDKPGARPDWVMDQVFDLFDNLGATDDQLDFQVVYASAINGWATNDLDVESDSMTPLF 194
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
E I+K+V + N PLQ+QI L+Y+SY+G IGIGRI SG +K Q V I+ G D K
Sbjct: 195 ETIIKHVKPPAADINGPLQMQISQLDYNSYVGVIGIGRITSGSVKPNQAVTII-GADGKT 253
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q++ + GL R V A +GDI+ ITG+ E+ I T+CDPS LP L++DEPT
Sbjct: 254 RNGKVGQVQGYLGLHRHEVESADAGDIIAITGVGELKISDTVCDPSAVVALPPLSVDEPT 313
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VNNSP AG+EGKF+T+R I RL HE+ +N+ L+V + D + VSGRGELH
Sbjct: 314 VTMTFQVNNSPFAGQEGKFVTSRNILERLQHELIHNVALKVEEIPTDPDKFRVSGRGELH 373
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L ILIENMRREG+EL+VSRP VI K ++G +EPYE++ +D+EE +QG +M++L R G+
Sbjct: 374 LGILIENMRREGFELAVSRPEVILKQVDGVTHEPYESVTIDVEEQHQGSVMEQLGTRKGE 433
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K R+R+++ IPSRGLIGFQ +F+T+T G+GL+ H F+ Y P +G+
Sbjct: 434 LTNMAPDGKGRIRMDFMIPSRGLIGFQTDFMTMTSGSGLMYHTFDHYGPHKGGV---IGQ 490
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLI+ +GKA+ +L+ LQ RGRLFI H VYEGM+IGIH+R+NDL VN +K KQ
Sbjct: 491 RKNGVLIANATGKALTNALFNLQSRGRLFIGHGLEVYEGMVIGIHARENDLTVNALKGKQ 550
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+RSSG+DEA L+ PI +TLE A+EFI++DELVE+TP + R+RK+ L EN RK+
Sbjct: 551 LTNVRSSGTDEAQSLVPPIVMTLEQALEFIDNDELVEVTPISTRIRKKLLTENLRKQ 607
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVV--TN 114
+ I+ HVDHGKT+L+D + + + E+ G + I A N N
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLEESRGEAEERVMDSNDIEKERGITILAKNTAIKWN 73
Query: 115 HGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+L+V A +G MPQTR A G+ IV
Sbjct: 74 DYRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVV 133
Query: 175 INKIDK 180
INKIDK
Sbjct: 134 INKIDK 139
>gi|261211305|ref|ZP_05925594.1| GTP-binding protein TypA/BipA [Vibrio sp. RC341]
gi|260839806|gb|EEX66417.1| GTP-binding protein TypA/BipA [Vibrio sp. RC341]
Length = 700
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 104 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 163
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 164 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 223
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 224 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGETGENMEPLFQ 283
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 284 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 342
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 343 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNALEALPPLSVDEPTV 402
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 403 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 461
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 462 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 521
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 522 KDMSPDGKGRIRLDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGGV---IGQR 578
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 579 VNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 638
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKR+L EN+RK+
Sbjct: 639 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRYLTENDRKR 694
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 103 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 162
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 163 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 222
Query: 176 NKIDK 180
NKID+
Sbjct: 223 NKIDR 227
>gi|254283303|ref|ZP_04958271.1| GTP-binding protein TypA/BipA [gamma proteobacterium NOR51-B]
gi|219679506|gb|EED35855.1| GTP-binding protein TypA/BipA [gamma proteobacterium NOR51-B]
Length = 604
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/596 (56%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + RIMDSN+ E+ERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDCLLQQSGTLDRKNADAERIMDSNDQERERGITILAKNTAIRWRDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA + G +PIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLFD L ATEEQLDFPVIY SA++G + ++ +A +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFDTLGATEEQLDFPVIYASAINGVSGDDHEAMADDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A++++V + N++ PLQLQI +L+Y+SY+G IG+GRI G I +VV+++ + N
Sbjct: 189 AVIEHVDPPRVNADGPLQLQISALDYNSYVGVIGVGRITRGVIAPNTNVVVVDVEGAERN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ + GL+RV V+ A +GDIV +TGIE + I T+C P LP L++DEPT+
Sbjct: 249 -GRVLQVMGYHGLERVAVDHAEAGDIVCVTGIEALNISDTLCTPGAVEVLPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGK++T+R ++ RLD E+ +N+ LRV Q D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKYVTSRNLRERLDRELIHNVALRVEQGDSPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL VSRP VI K ++G+L EPYENL VD E+ +QG +M++L +R DL
Sbjct: 367 SVLIEGMRREGFELGVSRPEVIQKEIDGQLCEPYENLVVDCEDAHQGSVMEELGHRRADL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + RVRLE+ +P+RGLIGF++ F+TLT G+G+++HVF+ Y P SK +L R
Sbjct: 427 RNLIPDGTGRVRLEFIVPARGLIGFRSLFMTLTSGSGILTHVFDHYGPV---SKAELAAR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S SGK +AY+L+ LQDRGRLFI N VYEG IIG+H+R NDL+VNP K KQL
Sbjct: 484 NNGVLVSMVSGKTLAYALFNLQDRGRLFIGPNIDVYEGQIIGLHTRGNDLVVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L + +LE A+EFI+DDELVE+TP +IRLRK+ L E ERK+
Sbjct: 544 TNVRASGTDEALTLTPAVAHSLEQALEFIDDDELVEVTPDSIRLRKKLLLEYERKR 599
Score = 60.5 bits (145), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDCLLQQSGTLDRKNADAERIMDSNDQERERGITILAKNTAIRWRD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLRPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|119776547|ref|YP_929287.1| virulence regulator BipA [Shewanella amazonensis SB2B]
gi|119769047|gb|ABM01618.1| virulence regulator BipA [Shewanella amazonensis SB2B]
Length = 604
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/596 (56%), Positives = 441/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLESRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 129 KVDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDEPSEDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI L+Y+SY+G IG+GRI G +K+ Q V ++ G D K
Sbjct: 189 TIVEKVSPPDADAEGAFQMQISQLDYNSYVGVIGVGRIKRGSVKTNQQVTVV-GADGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI Q+ + GL+R V A +GDIV +TG+ E+ I TIC LP L++DEPTL
Sbjct: 248 NGKIGQVLGYMGLERHEVATANAGDIVAVTGLGELKISDTICAAGNVEALPPLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++GE EPYE L VD+EE +QG +++KL R D+
Sbjct: 367 SILIENMRREGYELAVSRPEVIIKEIDGEKCEPYEQLTVDVEEDHQGTVIEKLGTRKADM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGL+ H F+ Y P+ D+G+R
Sbjct: 427 KDMQLDGKGRVRIDFVIPSRGLIGFQTEFMTATSGTGLLYHTFDHYGPYKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRL I H VYEG +IGIHSR NDL VN +K KQL
Sbjct: 484 NNGVLISNATGKALTFALFGLQDRGRLMIGHAAEVYEGQVIGIHSRSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L I++TLE A+EFI+DDELVE+TP +IR+RK+FL EN+RK+
Sbjct: 544 TNMRASGTDEAQVLTPHIQMTLEQALEFIDDDELVEVTPLSIRVRKKFLTENDRKR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLESRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|56461538|ref|YP_156819.1| GTP-binding regulator BipA/TypA [Idiomarina loihiensis L2TR]
gi|56180548|gb|AAV83270.1| GTP-binding regulator BipA/TypA [Idiomarina loihiensis L2TR]
Length = 613
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT I RIMDSN++EKERGITI +KN ++ +
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTLESRGEIEDRIMDSNDLEKERGITILAKNTAVNWQDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSM D+VLL++DAV+GPMPQTRFVT+KA G PI+V+N
Sbjct: 75 RINILDTPGHADFGGEVERVLSMADSVLLVVDAVDGPMPQTRFVTQKAFSHGLNPILVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L AT+EQLDFPV+Y SAL+G+A+ + + + G+M PLFE
Sbjct: 135 KVDRPGARPDWVMDQVFDLFDNLGATDEQLDFPVVYASALNGWASLDIEDQDGDMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + LQ+Q+ L+YSSYLG IGIGR+ G +K Q V I+ G D K
Sbjct: 195 TIVSKVSHPDADPESDLQMQVSQLDYSSYLGVIGIGRVTRGSVKVNQQVTIV-GADGKER 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ + GLDR+ ++A +GDI ITG+ E+ I T+C K + L +DEPT+
Sbjct: 254 NGKIGKVFSYLGLDRIEADKAAAGDICAITGLGELKISDTVCAVGKAEAMKPLTVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+RQI RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKFVTSRQILERLQQELVHNVALRVEETDNPDR-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+LIENMRREG+EL+VSRP VI K +G+ EPYE + VDIEE +QG +M+KL R ++
Sbjct: 373 GVLIENMRREGFELAVSRPEVIIKYEDGKKMEPYETMTVDIEEQHQGAVMEKLGLRKAEM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVR+++ +PSRGLIGFQ EF+TLT GTGL+ H F+ Y P + +G+R
Sbjct: 433 TNMTPDGKGRVRVDFEVPSRGLIGFQTEFMTLTSGTGLMYHTFDHYGPHKGGT---IGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKA+ YSL+ LQ+RG+LF +H D VYEG IIGIH+R NDL VN +K KQL
Sbjct: 490 SNGVLISNAQGKALTYSLFNLQERGKLFASHGDEVYEGQIIGIHNRSNDLTVNCLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI++TLE A+EFINDDELVE+TP++IR+RKR L EN+RK+
Sbjct: 550 TNVRASGTDEAQTLSTPIRLTLEQALEFINDDELVEVTPESIRIRKRALTENDRKR 605
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G I I N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEIEDRIMDSNDLEKERGITILAKNTAVNWQD 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ I+ I
Sbjct: 74 YRINILDTPGHADFGGEVERVLSMADSVLLVVDAVDGPMPQTRFVTQKAFSHGLNPILVI 133
Query: 176 NKIDK 180
NK+D+
Sbjct: 134 NKVDR 138
>gi|389795168|ref|ZP_10198303.1| GTP-binding protein TypA/BipA [Rhodanobacter fulvus Jip2]
gi|388431301|gb|EIL88385.1| GTP-binding protein TypA/BipA [Rhodanobacter fulvus Jip2]
Length = 608
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/600 (56%), Positives = 446/600 (74%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLAERTVLAERVMDSNDQEKERGITILAKNTAITWRGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA N R+G+M PL+E
Sbjct: 130 KVDRPGARPEWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYAGLNDDVREGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q++I L+Y++++G IGIGRI G +K V +++ K
Sbjct: 190 AIMQHVSKPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMPVAVID-RHGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ A +GDIV I+GI E+ I TIC P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFLGLERIEQETAEAGDIVAISGIAELTISDTICALEAPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+K+RLD E +N+ L+V Q D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLKDRLDREQVHNVALKVEQGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+ EP E L VD+EE++QG +M+KL R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGKKMEPIEQLVVDVEEVHQGAVMEKLGMR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQN+F TLT+G+GL+ HVF+ Y P K
Sbjct: 428 KGQLKNMESDGKGRVRLDYEIPARGLIGFQNQFKTLTQGSGLLFHVFDHYGP---KEDGQ 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+I+ G AYSL LQDRG+LF D VYEG ++GIH++DNDL VN IK
Sbjct: 485 IAKRLNGVMIANAGGTTPAYSLGPLQDRGKLFAAEGDNVYEGQLVGIHAKDNDLTVNVIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AIQL IK +LE A++FI+DDELVEITPK IRLRK+ L EN+RK+
Sbjct: 545 PKPLTNMRASGKDDAIQLTPAIKFSLEQALDFIDDDELVEITPKEIRLRKKHLTENDRKR 604
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + +E + + + N ++ + +IT+
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLAERTVLAERVMDSNDQEKERGITILAKNTAITWRG 68
Query: 121 -----LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+DTPGH F R + D V+++V A DG MPQTR A G IV I
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|121609701|ref|YP_997508.1| translation initiation factor IF-2 [Verminephrobacter eiseniae
EF01-2]
gi|189028348|sp|A1WLI3.1|IF2_VEREI RecName: Full=Translation initiation factor IF-2
gi|121554341|gb|ABM58490.1| bacterial translation initiation factor 2 (bIF-2)
[Verminephrobacter eiseniae EF01-2]
Length = 990
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/539 (60%), Positives = 436/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK LMK+GQMVTINQ LDQ+TAMI+VEE+GH A + L+DPE+F ++ +
Sbjct: 425 MSIKASEVIKALMKMGQMVTINQPLDQDTAMIVVEELGHKAVVAALDDPEAFADDDVAQQ 484
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ E L RAP+VT+MGHVDHGKTSLLDYIR+ V SEAGGITQHIGAY+V T G ++F
Sbjct: 485 -SIEVLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAASEAGGITQHIGAYHVQTPRGMVSF 543
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQTREAI HAK +GVP++VAI K DK
Sbjct: 544 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTREAIKHAKAAGVPIVVAITKADK 603
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D NLDR+KQ+LI EQV+PE+YGG SPF+++S+KTG GI+ LLE++ LQA+++ELKAPV
Sbjct: 604 PDANLDRVKQELIGEQVVPEDYGGDSPFVAVSSKTGQGIDALLEHVLLQADVMELKAPVD 663
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG ++GR+R+ML+ENG+ AGP
Sbjct: 664 ALAKGLVIEAQLDKGRGPVATVLVQSGTLKVGDVVLAGQTFGRVRAMLDENGRPAKTAGP 723
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R G+FR+ KL+KQ+ K E++F D+
Sbjct: 724 SIPVEIQGLTEVPQAGDEFMVLTDERRAREIATYRAGRFRNTKLAKQQAAKLEHVFADMT 783
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L II+K DV GS+E L +SL LSTD+VK+Q+++ AVG I+ESDINLAIASKA+
Sbjct: 784 AGEVKMLPIIVKADVQGSQEALAQSLLKLSTDEVKVQLVYAAVGAISESDINLAIASKAV 843
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ N + + Y++IIY+ + E++ ++ ++ E++E ++G AEIR
Sbjct: 844 VIGFNVRADAGARKLAEGNGVALHYYSIIYDAVDELRVAMSGMLAPEQREEIIGTAEIRT 903
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V +K+ +AG YI G++ R+++ R+LR ++ TGE+DS+KR KD+V+EVK GFEC
Sbjct: 904 VFTASKIGTVAGSYITSGMVHRNARFRLLRANVVVHTGEVDSIKRLKDDVREVKEGFEC 962
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 914 LSDENIYILIKSAII---AHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERG 970
++ ++I +L ++ ++ HVDHGKT+L+D++ R + I I + ++ RG
Sbjct: 481 VAQQSIEVLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAASEAGGITQHI-GAYHVQTPRG 539
Query: 971 ITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVT 1030
+ F +DTPGH F R D V+L++ A +G MPQTR
Sbjct: 540 MVSF---------------LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTREAI 584
Query: 1031 RKALKLGFKPIVVVNKIDRSNA 1052
+ A G +V + K D+ +A
Sbjct: 585 KHAKAAGVPIVVAITKADKPDA 606
>gi|226940847|ref|YP_002795921.1| translation initiation factor IF-2 [Laribacter hongkongensis HLHK9]
gi|254803459|sp|C1D8X2.1|IF2_LARHH RecName: Full=Translation initiation factor IF-2
gi|226715774|gb|ACO74912.1| InfB [Laribacter hongkongensis HLHK9]
Length = 959
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/539 (61%), Positives = 436/539 (80%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK LMK+G MVTINQVLDQETA+I+VEE+GH+ A+K +DPE++L E
Sbjct: 393 MAVKAAEVIKALMKMGMMVTINQVLDQETALIVVEELGHIGKAAKTDDPEAYLDVEDGNV 452
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ A+ RAP+VT+MGHVDHGKTSLLD IRK V EAGGITQHIGAY+V T G ITF
Sbjct: 453 VEAKLEHRAPVVTVMGHVDHGKTSLLDRIRKAKVAAGEAGGITQHIGAYHVDTPRGMITF 512
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT EAI HAK +GVP++VA+NKIDK
Sbjct: 513 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIHHAKAAGVPIVVAVNKIDK 572
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L++++V+PE++GG + F+ +SAK G+ I+ LLE I LQAE+LEL APV
Sbjct: 573 QGANPERIRQELVAQEVVPEDWGGDTQFVEVSAKQGLNIDGLLEAILLQAEVLELTAPVD 632
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTLR D+++AG ++GR+R+ML+E+GK I EAGP
Sbjct: 633 APAKGIIVEARLDKGRGSVATLLVQSGTLRKGDVLLAGTAFGRVRAMLDEDGKQIEEAGP 692
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI FR GK+RDV+L+KQ+ K ENMF +
Sbjct: 693 SIPVEILGLSDVPGAGEDAMVLADEKKAREIANFRAGKYRDVRLAKQQAAKLENMFAQMA 752
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V++L +IIK DV GS E L SL+ LSTD+V++Q++H+ VG I ESD+NLA AS A+
Sbjct: 753 EGEVRSLPLIIKADVQGSYEALAGSLQKLSTDEVRVQILHSGVGGITESDVNLAAASNAV 812
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA+ RK+A+ N ++IRY+N+IY+ I E+KS ++ ++ EKKE + G AE+RQ
Sbjct: 813 IIGFNTRADATARKVAEANGVDIRYYNVIYDAIDEVKSALSGMLAPEKKEEITGTAEVRQ 872
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ +V+KV IAGC +++G+I+R S+IR++RN ++ GELDSLKRFKD+VKEVK G++C
Sbjct: 873 LFVVSKVGTIAGCMVIDGMIKRTSRIRVIRNHVVVHDGELDSLKRFKDDVKEVKQGYDC 931
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D + + + I I + ++ RG+ F
Sbjct: 466 VMGHVDHGKTSLLDRIRKAKVAAGEAGGITQHI-GAYHVDTPRGMITF------------ 512
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 513 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIHHAKAAGVPIVVAVNK 569
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 570 IDKQGANPERI 580
>gi|392310877|ref|ZP_10273411.1| GTP-binding protein [Pseudoalteromonas citrea NCIMB 1889]
Length = 607
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN+IEKERGITI +KN +IE+N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAIEWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT+KA LG KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFALGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF VIY SA++G+A + NM P+FE
Sbjct: 130 KIDKPGARPDWVMDQVFDLFDNLGATDEQLDFQVIYASAINGWATLDLDNESDNMQPMFE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + Q+QI L+Y+SY+G IG+GRI G +K Q V I+ G D
Sbjct: 190 AIVEQVEAPDADPAGDFQMQISQLDYNSYIGVIGVGRIKRGSVKPNQQVTIV-GADGTTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR EA +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 249 NGKVGQVMSYLGLDRHEAAEAQAGDIIAITGLGELKISDTICDVNAVEALPALSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL++E+ +N+ LRV + ++ DS + VSGRGELHL
Sbjct: 309 TMTFSVNTSPFAGQEGKFVTSRNILERLENELVHNVALRVEETENPDS-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI + ++G+L EP+E + +D+++ +QG IM++L R ++
Sbjct: 368 GILIENMRREGYELAVSRPEVILREVDGQLEEPFETVTIDVQDEHQGSIMEQLGLRKAEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +PSRGLIGFQ +F+TLT G+GL+ H F+ Y P+ + +GKR
Sbjct: 428 TDMAPDGKGRVRMDFMMPSRGLIGFQTDFMTLTSGSGLMYHTFDHYGPYKGGT---IGKR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RG+LFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 485 KNGVLIANATGKALTNALFNLQERGKLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PI+++LE A+EFI+DDELVE+TP+NIR+RK+ L E+ERK+
Sbjct: 545 TNVRASGTDEAQTLVPPIRMSLEQALEFIDDDELVEVTPENIRIRKKLLTESERKR 600
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAIEWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFALGLKPIVVI 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|375109445|ref|ZP_09755692.1| GTP-binding protein TypA [Alishewanella jeotgali KCTC 22429]
gi|397169451|ref|ZP_10492883.1| GTP-binding protein TypA [Alishewanella aestuarii B11]
gi|374570392|gb|EHR41528.1| GTP-binding protein TypA [Alishewanella jeotgali KCTC 22429]
gi|396088755|gb|EJI86333.1| GTP-binding protein TypA [Alishewanella aestuarii B11]
Length = 611
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/596 (56%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL+QSGT + RIMDSN E ERGITI +KN S+ +NG
Sbjct: 15 AIIAHVDHGKTTMVDKLLQQSGTLDSRAKLQERIMDSNAQESERGITILAKNTSVRWNGY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER+LSM D+VLLL+DAVEGPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 QINILDTPGHADFGGEVERVLSMADSVLLLVDAVEGPMPQTRFVTQKAFAHGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+D+ AR WV+D FDLFD L A++EQLDFP++Y S L+G+A+ + ++ ++ LFE
Sbjct: 135 KVDKPGARVNWVIDQVFDLFDNLGASDEQLDFPIVYASGLNGWASLEADVKKDDITDLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYV K Q+Q+ L+YSSYLG IGIGRI G +K Q V I+ G D
Sbjct: 195 AIVKYVEPPKVELEGETQVQVSQLDYSSYLGIIGIGRIKRGTLKPNQQVTIV-GADGSKR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+R EA +GDIV TG+ E+ I TIC PSK LP L +DEPT+
Sbjct: 254 NGKVGQVFGYLGLERHETLEATAGDIVAFTGLGELKISDTICAPSKVEALPALQVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+RQI RL++E+K+N+ LRV + + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKFVTSRQILERLNNELKHNVALRVEETEDGDK-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+LIENMRREG+EL+VSRP VI K ++G EP+E + +D+EE +QG IM+K+ R ++
Sbjct: 373 GVLIENMRREGFELAVSRPEVIMKMVDGVKQEPFEVVTIDVEEQHQGSIMEKMGERKAEM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K R+R+++ +PSRGLIGF+ EF+TLT GTGL+ H F+ Y F ++G+R
Sbjct: 433 TDMQPDGKGRIRMDFVMPSRGLIGFRTEFMTLTSGTGLMYHTFDHYGDFKGG---NIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+AY+L+ LQ+RGRLF +H D VYEG IIGIHSR NDL VN +K KQL
Sbjct: 490 NNGVLISNATGKALAYALFTLQERGRLFTSHADEVYEGQIIGIHSRSNDLTVNCLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++G+DEA+ L PIK+TLE A+EFI+DDELVE+TPK+IR+RK+ L ENERK+
Sbjct: 550 TNIRAAGTDEALTLTPPIKLTLESALEFIDDDELVEVTPKSIRIRKKHLTENERKR 605
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLD-----------------YIRKTNVVFSEAGGI 102
++TA S+ + + I+ HVDHGKT+++D I +N SE G I
Sbjct: 2 SVTASSIDKLRNIAIIAHVDHGKTTMVDKLLQQSGTLDSRAKLQERIMDSNAQESERG-I 60
Query: 103 TQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIA 162
T +V N I LDTPGH F R + D V+L+V A +G MPQTR
Sbjct: 61 TILAKNTSVRWNGYQINILDTPGHADFGGEVERVLSMADSVLLLVDAVEGPMPQTRFVTQ 120
Query: 163 HAKISGVPLIVAINKIDK 180
A G+ IV INK+DK
Sbjct: 121 KAFAHGLKPIVVINKVDK 138
>gi|349610286|ref|ZP_08889642.1| translation initiation factor IF-2 [Neisseria sp. GT4A_CT1]
gi|348610286|gb|EGY59982.1| translation initiation factor IF-2 [Neisseria sp. GT4A_CT1]
Length = 972
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 407 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAATDDPEAFL-DEGVEA 465
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 466 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 525
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 526 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 585
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 586 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGINIDALLEAVLLEAEVLELTAPVD 645
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK + EAGP
Sbjct: 646 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAVNEAGP 705
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 706 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 765
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 766 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 825
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G+ EIRQ
Sbjct: 826 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQVTGMVEIRQ 885
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 886 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 945
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 946 LMIKGYNEIMEG-DQLECFDI 965
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 479 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 525
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 526 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 582
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 583 IDKEAANPERI 593
>gi|406942888|gb|EKD75012.1| hypothetical protein ACD_44C00258G0004 [uncultured bacterium]
Length = 603
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/597 (58%), Positives = 438/597 (73%), Gaps = 5/597 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN +E+ERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDRLLQQSGTLDSRAPLLERVMDSNALERERGITILAKNTAIRWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT KA G PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTMKAFAQGLHPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +ARP+WV++ FDLF +L ATE+QLDFPV+Y SAL GYA +M PL +
Sbjct: 129 KIDRPSARPDWVLNQVFDLFFQLGATEKQLDFPVVYASALEGYATLALNQPSKDMTPLLQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + P Q+QI L+YSSY+G IG+GRI G K VVI+N + K
Sbjct: 189 TIVDKVSPPLVDQTGPFQMQISQLDYSSYVGAIGVGRIARGCAKRNMPVVIVNRENQK-R 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +I Q+ + GL+R+ V EA +GDIV ITGIE + I T+CDP LP L +DEPT+
Sbjct: 248 QGRILQVMGYLGLNRIEVEEAHAGDIVAITGIENLSISDTLCDPKNVETLPALQVDEPTM 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG+EGKF+T+RQ++ RL E+ +N+ LRV + + D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKEGKFVTSRQLRERLQRELIHNVALRVEETEDPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
IL+E MRREGYEL+VSRP VIFK + GE EPYE L D+EE +QG +M++L R GDL
Sbjct: 367 GILLETMRREGYELAVSRPEVIFKMIEGEQCEPYEVLVCDVEETHQGTVMERLGSRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY + SRGL GF+ EF+T+T GTG++ HVFE+YAP + K + R
Sbjct: 427 INMTPDGKGRVRLEYLMTSRGLFGFRTEFLTVTSGTGILYHVFEKYAP---EKKGAIAPR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GK+ AY+LW LQ+RGR+ I VYEGM+IGIHSRDNDL+VN IK KQL
Sbjct: 484 INGVLISNGPGKSSAYALWNLQERGRMIIEPQVDVYEGMLIGIHSRDNDLVVNVIKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
TNIR++GSDE I L PI+ +LE A+EFI +DELVEITPK IRLRK+FLKENERK K
Sbjct: 544 TNIRAAGSDENIILTPPIRFSLEQALEFIEEDELVEITPKTIRLRKKFLKENERKSK 600
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDRLLQQSGTLDSRAPLLERVMDSNALERERGITILAKNTAIRWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTMKAFAQGLHPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NKID+ D +
Sbjct: 128 NKIDRPSARPDWV 140
>gi|350570886|ref|ZP_08939229.1| translation initiation factor IF2 [Neisseria wadsworthii 9715]
gi|349794222|gb|EGZ48041.1| translation initiation factor IF2 [Neisseria wadsworthii 9715]
Length = 934
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/539 (61%), Positives = 433/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ LDQETA+I+VEEMGH+ + +DPE+FL E +
Sbjct: 369 MAVKGVEVVKALMKMGMMVTINQSLDQETALIVVEEMGHIGKPAAADDPEAFL-EEGAEL 427
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 428 VEAEKLPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 487
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 488 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 547
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +VIP+ +GG + F+ +SAK G+ I+ LLE + L+AE+LEL+APV
Sbjct: 548 DTANPERIRQELTNYEVIPDSWGGTTQFVDVSAKQGINIDALLEAVLLEAEVLELQAPVD 607
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTLR D+++AG ++G++R+M++ENGK I EAGP
Sbjct: 608 APAKGIIVEARLDKGRGAVATLLVQSGTLRKGDMLLAGTAFGKVRAMIDENGKPIEEAGP 667
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 668 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 727
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + +NL +IIK DV GS E L SL+ LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 728 EGQAQNLSVIIKADVQGSYEALAGSLQKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 787
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 788 IIGFNVRADASARKLAETEDVEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQVTGTVEIRQ 847
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKRFKD+VKEV+ GFEC
Sbjct: 848 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRFKDDVKEVRMGFEC 906
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 441 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 487
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 488 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 544
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 545 IDKDTANPERI 555
>gi|388455109|ref|ZP_10137404.1| GTP-binding protein TypA [Fluoribacter dumoffii Tex-KL]
Length = 608
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/596 (58%), Positives = 450/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+Q+GT + R+MDSN +EKERGITI +KN + +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKNH 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIVV+N
Sbjct: 69 QINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WV+D FDLFD L AT+ QLDFPV+YTSAL+GYA N + +M L +
Sbjct: 129 KIDRPGARPHWVMDQVFDLFDNLGATDAQLDFPVVYTSALNGYAKLNLEDEATDMSALLQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V K ++N P Q+QI SL+YSSY+G IGIGRI G+IK+ V I++ +
Sbjct: 189 TIIDKVEAPKVDANGPFQMQISSLDYSSYVGTIGIGRITRGQIKAKSPVKIID-KEGNIR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ FKGL+RV V EA +G+IV ITGIE I I TICDP+ LP+L++DEPT+
Sbjct: 248 SGRLLQLLGFKGLERVEVEEANAGNIVAITGIEGIKISDTICDPNMVEALPVLSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R+I+ RL+ E+ +N+ LRV ++ D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGQEGKFVTSRKIRERLETELLHNVALRV-EDCDDPDKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREGYEL++S+P VI + ++GE EPYE+L VD+EE +QG IM+KL R G+L
Sbjct: 367 SILIETMRREGYELAISKPEVIIREVDGEQQEPYEHLTVDVEENHQGSIMEKLGERRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + K RVRL+Y IP+RGLIGF NEF++ T GTGL+ HV++ Y P K +GKR
Sbjct: 427 QNMVPDGKGRVRLDYMIPTRGLIGFHNEFLSSTSGTGLMYHVYDHYGPAI---KGRIGKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV+I+ G A A++L+ LQDRGRLF+ L YEGMI+GIH+RDNDL+VN KEKQL
Sbjct: 484 ANGVMIANCQGMARAFALFNLQDRGRLFVEPQTLCYEGMIVGIHARDNDLVVNVTKEKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SGSDE I L IK+TLE A+EFI+DDELVE+TP +IRLRK+ LKE+ERKK
Sbjct: 544 TNIRASGSDENIILTPAIKLTLEQALEFIDDDELVEVTPDSIRLRKKSLKEHERKK 599
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + +E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 HQINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|397668494|ref|YP_006510031.1| GTP-binding protein [Legionella pneumophila subsp. pneumophila]
gi|395131905|emb|CCD10198.1| GTP-binding protein [Legionella pneumophila subsp. pneumophila]
Length = 608
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/596 (58%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+Q+GT + R+MDSN +EKERGITI +KN + + G
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIVV+N
Sbjct: 69 QINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A + QLDFPV+YTSAL+GYA N + +M L +
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGANDTQLDFPVVYTSALNGYAKLNLEDNATDMSALLQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V ++N P Q+QI SL+YSSY+G IGIGRI G+IK+ V I++ D
Sbjct: 189 TIVDKVTPPCVDANGPFQMQISSLDYSSYVGTIGIGRITRGQIKAKSPVKIID-KDGNMR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ FKGL+RV V EA +GDI+ ITGIE + I TICDP++ LP L +DEPT+
Sbjct: 248 SGRLLQLLGFKGLERVEVEEASAGDIIAITGIESLNISDTICDPNQVEALPALLVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SPLAG+EGK++T+R+I+ RL+ E+ +N+ LRV ++ D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPLAGQEGKYVTSRKIRERLNTELLHNVALRV-EDCDDPDKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREGYEL++S+P VI + ++GE EPYE+L VD+EE +QG IM+KL R G++
Sbjct: 367 SILIETMRREGYELAISKPEVIIREVDGEQQEPYEHLTVDVEENHQGTIMEKLGERRGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + K RVRL+Y IP+RGLIGF NEF++ T GTGL+ HVF+ Y P K +GKR
Sbjct: 427 QNMVPDGKGRVRLDYIIPTRGLIGFHNEFLSCTSGTGLMYHVFDHYGPLI---KGRIGKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV+I+ G A A++L+ LQ+RGRLF+ + YEGMI+GIH+RDNDL+VN KEKQL
Sbjct: 484 LNGVMIANCPGTARAFALFNLQERGRLFLEPQSVCYEGMIVGIHARDNDLVVNVTKEKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SGSDE I L P+K++LE A+EFI+DDELVE+TP +IRLRK+FLKE++RKK
Sbjct: 544 TNIRASGSDENIILTPPVKLSLEQALEFIDDDELVEVTPLSIRLRKKFLKEHDRKK 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + +E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YQINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|225023299|ref|ZP_03712491.1| hypothetical protein EIKCOROL_00152 [Eikenella corrodens ATCC
23834]
gi|224943944|gb|EEG25153.1| hypothetical protein EIKCOROL_00152 [Eikenella corrodens ATCC
23834]
Length = 921
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/563 (60%), Positives = 444/563 (78%), Gaps = 5/563 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ LDQETA+I+VEEMGH+ + +DPE+FL N+
Sbjct: 355 MAVKGVEVVKALMKMGMMVTINQSLDQETALIVVEEMGHIGKPAAADDPEAFL-NDTETA 413
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 414 VQAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVQTPRGVITF 473
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 474 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 533
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +VIP+ +GG FI +SAK G+ I+ LLE + L+AE+LELKAPV
Sbjct: 534 EAANPERIRQELTAHEVIPDAWGGNVQFIDVSAKQGINIDALLEAVLLEAEVLELKAPVD 593
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G++R+M++ENG+ + EAGP
Sbjct: 594 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKVRAMVDENGRQVQEAGP 653
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMF-NDI 359
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K EN+F N
Sbjct: 654 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENLFANAG 713
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
+ + +NL +IIK DV GS E L+ SLK LS D+VK++V+H+ VG I ESD+NLAIAS A
Sbjct: 714 DGQAAQNLSVIIKADVQGSYEALSGSLKKLSNDEVKVEVLHSGVGGITESDVNLAIASGA 773
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
IIGFNVRAD S RKLA+ +I IRY+NIIY+ I ++K+ ++ ++ E+KE G EIR
Sbjct: 774 FIIGFNVRADGSARKLAENEDIEIRYYNIIYDAIDDVKAAMSGMLAPEQKEQQTGTVEIR 833
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
QVI ++KV IAGC + +GLI+RDS++R++R+ +I TGEL+SLKRFKD+VKEV+ GFEC
Sbjct: 834 QVINISKVGNIAGCMVTDGLIKRDSRVRLIRDHVVIHTGELESLKRFKDDVKEVRMGFEC 893
Query: 540 ERLSRIENQIQR-DISEIIAFDI 561
+ + N IQ D+ E AFDI
Sbjct: 894 GLMLKNYNDIQEGDMLE--AFDI 914
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 427 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVQTPRGVITF------------ 473
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 474 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 530
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 531 IDKEAANPERI 541
>gi|398809456|ref|ZP_10568306.1| translation initiation factor IF-2 [Variovorax sp. CF313]
gi|398085931|gb|EJL76573.1| translation initiation factor IF-2 [Variovorax sp. CF313]
Length = 995
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/539 (60%), Positives = 432/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+ VIK LMKLG M TINQ LDQ+TAMI+VE+MGH A + L+DPE+F + +
Sbjct: 430 MAVKAQEVIKQLMKLGMMATINQSLDQDTAMIIVEDMGHNAVVAALDDPEAFTDEDVSAQ 489
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
TAE+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ++F
Sbjct: 490 -TAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVQTERGMVSF 548
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VAINKIDK
Sbjct: 549 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINKIDK 608
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D + DR+KQ+L++E+V+PEEYGG PF+ +SAKTG GI+ LLE + LQAE+LELKAPV
Sbjct: 609 PDASPDRVKQELVAEEVVPEEYGGDVPFVPVSAKTGQGIDDLLEQVLLQAEVLELKAPVD 668
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG++YGR+R+ML+E+GK+ AGP
Sbjct: 669 AAAKGLVIEAQLDKGRGPVATVLVQSGTLKTGDVVLAGSTYGRVRAMLDEDGKSTKAAGP 728
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+K + +NMF D++
Sbjct: 729 SIPVEIQGLTEVPQAGDEFMVMSDERRAREIATYRAGKFRNTKLAKAQAANLQNMFTDLS 788
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V+ L IIIK DV GS+E L +SL L+TD+VK+QV++ VG I+ESDINLAIASKA+
Sbjct: 789 AGEVQTLRIIIKADVQGSQEALAQSLLKLATDEVKVQVVYAGVGGISESDINLAIASKAV 848
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ N + + Y++IIY+ + EIK ++ ++ E++E ++G AEIR
Sbjct: 849 VIGFNVRADAGARKLAEGNGVQLNYYSIIYDAVDEIKVAMSGMLAPERREEIIGSAEIRT 908
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI G + R + R+LR+ +I+TGE+DS+KR KD+V+EV+ GFEC
Sbjct: 909 VFVASKIGTVAGSYITSGSVNRSAHFRLLRDNVVIYTGEVDSIKRMKDDVREVREGFEC 967
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ ERG+ F
Sbjct: 502 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVQTERGMVSF------------ 548
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A G +V +NK
Sbjct: 549 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAINK 605
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
ID+ +A P+ V + +++ E D P + SA G
Sbjct: 606 IDKPDASPDRVKQEL--VAEEVVPEEYGGDVPFVPVSAKTG 644
>gi|329120395|ref|ZP_08249062.1| translation initiation factor IF2 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327462350|gb|EGF08676.1| translation initiation factor IF2 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 949
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 443/561 (78%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL ++ +
Sbjct: 384 MAVKGVEVVKTLMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLGDDAQVS 443
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 444 -EAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPKGVITF 502
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 503 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 562
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG F+ +SAK G+ I+KLLE + L+AE+LELKAPV
Sbjct: 563 DAANPERIRQELTAHEVVPDEWGGDVQFVDVSAKKGLNIDKLLEAVLLEAEVLELKAPVA 622
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M +ENGK I EAGP
Sbjct: 623 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMTDENGKAITEAGP 682
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 683 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 742
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 743 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 802
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 803 IIGFNVRADAPARKLAENEDVEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQITGTVEIRQ 862
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +GL++RDS IR++RN +I TGEL SLKRFKD+VKEV+ GFEC
Sbjct: 863 VISVSKVGNIAGCMVTDGLVKRDSHIRLIRNNVVIHTGELSSLKRFKDDVKEVRMGFECG 922
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 923 LMIKGYNEIMEG-DQLECFDI 942
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R A+++ + GIT +E
Sbjct: 456 VMGHVDHGKTSLLDYIRR------------AKVVQG----EAGGITQHIGAYHVETPKGV 499
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 500 ITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 559
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 560 IDKDAANPERI 570
>gi|419797771|ref|ZP_14323228.1| translation initiation factor IF-2 [Neisseria sicca VK64]
gi|385697138|gb|EIG27586.1| translation initiation factor IF-2 [Neisseria sicca VK64]
Length = 972
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 407 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGVEA 465
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 466 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 525
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 526 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 585
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 586 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGINIDALLEAVLLEAEVLELTAPVD 645
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK + EAGP
Sbjct: 646 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAVNEAGP 705
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 706 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 765
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 766 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 825
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G+ EIRQ
Sbjct: 826 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQVTGMVEIRQ 885
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 886 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 945
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 946 LMIKGYNEIMEG-DQLECFDI 965
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 479 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 525
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 526 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 582
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 583 IDKEAANPERI 593
>gi|163750685|ref|ZP_02157921.1| virulence regulator BipA [Shewanella benthica KT99]
gi|161329529|gb|EDQ00521.1| virulence regulator BipA [Shewanella benthica KT99]
Length = 609
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/600 (56%), Positives = 448/600 (74%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + R+MDSN+IEKERGITI +KN +I +N
Sbjct: 15 AIIAHVDHGKTTLVDKLLSQSGTLQTRGEATERVMDSNDIEKERGITILAKNTAIMWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA LG KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFALGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT++QLDFP++Y SAL+GYA + + G+M PLFE
Sbjct: 135 KIDRPGARPDWVIDQVFDLFDNLGATDDQLDFPIVYASALNGYAGLDPEVSGGDMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ LQ+QI +++++Y+G IGIGRI G +K+ Q V I++ D K
Sbjct: 195 TIVEKVAAPNADAEGDLQMQISQIDHNNYVGVIGIGRIKRGSVKTNQQVTIISA-DGKKR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI Q+ + GL+R V +GDIV ITG+ ++ I T+C + L L++DEPTL
Sbjct: 254 NGKIGQVLGYMGLERNEVEVGNAGDIVAITGLGQLLISDTVCATTNVEALEPLSVDEPTL 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I +RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKYVTSRNILDRLQQELVHNVALRVEETESPDR-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++GE+ EP+ENL VDIEE +QG +++KL R D+
Sbjct: 373 SILIENMRREGYELAVSRPEVIVKEIDGEMCEPFENLTVDIEEQHQGSVIEKLGIRKADM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++++ K RVR+++ IPSRGLIGFQ +F+T T G+GLI H F+ Y P D+G+R
Sbjct: 433 RDMQLDGKGRVRIDFIIPSRGLIGFQTDFMTATSGSGLIYHSFDHYGPVKGG---DIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS +GKA+ ++L+ LQ RGRLFI H VYEG +IG+H+R NDL VN +K KQL
Sbjct: 490 ARGVLISNATGKALTFALFNLQARGRLFIGHAAEVYEGQVIGLHARANDLTVNCLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TP NIR+RKR+L ENERK+ K
Sbjct: 550 TNMRASGTDEAQVLTTPITMTLEQALEFIDDDELVEVTPLNIRVRKRYLTENERKRHNRK 609
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + G T+ + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLSQSGTLQTRGEATERVMDSNDIEKERGITILAKNTAIMWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFALGLKPIVVI 133
Query: 176 NKIDK 180
NKID+
Sbjct: 134 NKIDR 138
>gi|407794673|ref|ZP_11141697.1| GTP-binding regulator BipA/TypA [Idiomarina xiamenensis 10-D-4]
gi|407211046|gb|EKE80916.1| GTP-binding regulator BipA/TypA [Idiomarina xiamenensis 10-D-4]
Length = 607
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/596 (57%), Positives = 436/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT I+ RIMDSN++EKERGITI +KN +I +
Sbjct: 12 AIIAHVDHGKTTLVDKLLQQSGTLESRGEIDERIMDSNDLEKERGITILAKNTAINWQDY 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSM D+VLLL+DAV+GPMPQTRFVT+KA G PI+VVN
Sbjct: 72 HINILDTPGHADFGGEVERVLSMADSVLLLVDAVDGPMPQTRFVTQKAFAHGLNPILVVN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL G+A +++ +M PLFE
Sbjct: 132 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALQGWATLDAEQTGDDMTPLFE 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + LQ+QI L+YSSY+G IGIGR+ G IK Q V I+ G D K
Sbjct: 192 TIVNQVSAPDADPDGELQMQISQLDYSSYVGVIGIGRVTRGSIKVNQSVSII-GADGKTR 250
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ QI + GL+R + +GDI ITG+ E+ I T+C K LP L +DEPT+
Sbjct: 251 NGKVGQIFSYLGLERFETDSVSAGDICAITGLGELKISDTVCAAGKAEALPALTVDEPTV 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+RQI RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 311 TMTFQVNTSPFAGKEGKFVTSRQILERLQQELVHNVALRVAETDNPDR-FRVSGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+LIENMRREGYEL+VSRP VI + +G EP ENL VDI+E +QG +M++L R ++
Sbjct: 370 GVLIENMRREGYELAVSRPEVILREEDGVKMEPIENLTVDIQEEHQGSVMEQLGLRKAEM 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVR++++IPSRGLIGFQ +F+TLT GTGL+ H F+ Y P +G+R
Sbjct: 430 TNMSPDGKGRVRIDFQIPSRGLIGFQTDFMTLTSGTGLMYHSFDHYGPHKGGR---IGQR 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKA+AY+L+ LQ+RG+L +H D VYEG IIG+H+R NDL VN +K KQL
Sbjct: 487 INGVLISNAQGKALAYALYNLQERGKLMASHGDEVYEGQIIGVHNRSNDLTVNCLKGKQL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R++G+DEA+ L PIK+TLE A+EFI+DDELVEITPK+IR+RKR L ENERK+
Sbjct: 547 TNVRAAGTDEALTLSPPIKLTLEQALEFIDDDELVEITPKSIRIRKRLLTENERKR 602
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + G I + I N + IT L
Sbjct: 11 VAIIAHVDHGKTTLVDKLLQQSGTLESRGEIDERIMDSNDLEKERGITILAKNTAINWQD 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ I+ +
Sbjct: 71 YHINILDTPGHADFGGEVERVLSMADSVLLLVDAVDGPMPQTRFVTQKAFAHGLNPILVV 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|238020479|ref|ZP_04600905.1| hypothetical protein GCWU000324_00361 [Kingella oralis ATCC 51147]
gi|237867459|gb|EEP68465.1| hypothetical protein GCWU000324_00361 [Kingella oralis ATCC 51147]
Length = 957
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/539 (61%), Positives = 429/539 (79%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ LDQETA+I+VEEMGH+ + ++DP++FL E
Sbjct: 393 MAVKGVEVVKTLMKMGMMVTINQSLDQETALIVVEEMGHIGKPAAIDDPDAFLGEESAS- 451
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
TAE L R P+VT+MGHVDHGKTSLLDYIR++ VV EAGGITQHIGAY+V T G +TF
Sbjct: 452 -TAELLPRPPVVTVMGHVDHGKTSLLDYIRRSKVVAGEAGGITQHIGAYHVETPRGVVTF 510
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT EAIAHAK +GVPL+VA+NKIDK
Sbjct: 511 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTVEAIAHAKAAGVPLVVAVNKIDK 570
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +V+ +E+GG FI +SAK G I+KLLE + L+AE+LELKAPV
Sbjct: 571 EAANPERIRQELTQYEVVSDEWGGDVQFIDVSAKQGTNIDKLLEAVLLEAEVLELKAPVD 630
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTLR D+++AG +YG++R+ML+ENGK I A P
Sbjct: 631 APAKGLIVEARLDKGRGAVATLLVQSGTLRKGDMLLAGTAYGKVRAMLDENGKPIEAATP 690
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKARE+ LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 691 SIPVEILGLSDVPNAGEDALVLADEKKAREVALFRQGKYRDVRLAKQQAAKLENMFNNMG 750
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +NL +IIK DV GS E L SL+ LSTD+VK+ V+H+ VG I+ESD+NLAIAS A+
Sbjct: 751 EGAAQNLSVIIKADVQGSYEALAGSLQKLSTDEVKVSVLHSGVGGISESDVNLAIASGAL 810
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRAD S RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE G EIRQ
Sbjct: 811 IIGFNVRADGSARKLAEAEDVEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQQTGTVEIRQ 870
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +G+++RDS +RI+RN +I TGEL SLKRFKD+VKEV+ GFEC
Sbjct: 871 VITVSKVGNIAGCMVTDGVVKRDSHVRIIRNNVVIHTGELSSLKRFKDDVKEVRMGFEC 929
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 464 VMGHVDHGKTSLLDYIRRSKVVAGEAGGITQHI-GAYHVETPRGVVTF------------ 510
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 511 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTVEAIAHAKAAGVPLVVAVNK 567
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 568 IDKEAANPERI 578
>gi|152994772|ref|YP_001339607.1| GTP-binding protein TypA [Marinomonas sp. MWYL1]
gi|150835696|gb|ABR69672.1| GTP-binding protein TypA [Marinomonas sp. MWYL1]
Length = 606
Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/600 (56%), Positives = 449/600 (74%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + + RIMDSN+ EKERGITI +KN SI ++
Sbjct: 12 AIIAHVDHGKTTLVDQLLSQSGTLDRKDQGSERIMDSNDQEKERGITILAKNTSIMWHDY 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA + G +PIVV+N
Sbjct: 72 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLRPIVVIN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L ATE+QLDFPVIY SA++G + ++ + +M PL++
Sbjct: 132 KIDRPGARPDWVMDQVFDLFDSLGATEDQLDFPVIYASAINGISGDDPENMAEDMTPLYQ 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VPV + Q+Q+ +L+Y SY+G IG+GRI G + Q VV+ + D K
Sbjct: 192 MIVDSVPVPDVDPEGTFQMQVSALDYDSYVGVIGVGRITRGSLSPNQQVVVKSA-DGKER 250
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K K+ ++ + GL RV ++A +GDIV ITGI+ + I T+CDP+ LP L++DEPT+
Sbjct: 251 KGKVLNVKGYHGLARVDTDKASAGDIVCITGIDGLSISDTLCDPTCVEALPALSVDEPTV 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ FMVN+SP AG+EGK+ITTR I +RLD E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 311 SMTFMVNDSPFAGKEGKYITTRNISDRLDRELIHNVALRVRQGETPDK-FIVSGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ VSRP V+ K ++G++ EP+E + +D+EE +QG IM++L R +L
Sbjct: 370 SVLIETMRREGFEMGVSRPEVVQKEVDGKIQEPFELVVIDVEEQHQGSIMEELGLRKAEL 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K RVRLE+ PSRGLIGF+ F+TLT G+G+++ VF+ Y P + D+G R
Sbjct: 430 TNMEPDGKGRVRLEFMTPSRGLIGFRGLFLTLTSGSGIMTSVFDHYGPV---KEGDVGSR 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +GK A++L+ LQ RGRLF+ H VYEG +IG+HSRDNDL VNP+K KQL
Sbjct: 487 QNGVLISMVTGKTAAFALFNLQSRGRLFLGHAVEVYEGQVIGLHSRDNDLTVNPVKGKQL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA+ L PI+ TLE A+EFI DDELVE+TP++IR+RK+ L ENERK+ K
Sbjct: 547 TNMRASGTDEALTLTPPIRHTLEQALEFIEDDELVEVTPESIRIRKKLLTENERKRAGRK 606
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + ++ I N IT L
Sbjct: 11 VAIIAHVDHGKTTLVDQLLSQSGTLDRKDQGSERIMDSNDQEKERGITILAKNTSIMWHD 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G+ IV I
Sbjct: 71 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLRPIVVI 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|404378942|ref|ZP_10984018.1| translation initiation factor IF-2 [Simonsiella muelleri ATCC
29453]
gi|294483223|gb|EFG30909.1| translation initiation factor IF-2 [Simonsiella muelleri ATCC
29453]
Length = 950
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/539 (61%), Positives = 433/539 (80%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ LDQ+TA+++VEEMGH+ + ++DP++FL E
Sbjct: 386 MAVKGVEVVKALMKMGMMVTINQSLDQDTALLVVEEMGHIGKPAAIDDPDAFLNEEAT-- 443
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
I AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G +TF
Sbjct: 444 IAAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVAGEAGGITQHIGAYHVETPKGVVTF 503
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 504 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTVEAIAHAKAAGVPMVVAVNKIDK 563
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +V+ +E+GG F+ +SAK G+ I+KLLE + L+AE+LEL APV
Sbjct: 564 EAANPERIRQELTQHEVVCDEWGGDVQFVDVSAKQGINIDKLLEAVLLEAEVLELTAPVD 623
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTLR D+++AG ++G++R+M++ENGK I EAGP
Sbjct: 624 APAKGLIVEARLDKGRGAVATLLVQSGTLRKGDMLLAGTAFGKVRAMMDENGKPINEAGP 683
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKARE+ LFRQGKFRDV+L+KQ+ K ENMFN++
Sbjct: 684 SIPVEILGLSDVPNAGEDALVLADEKKAREVALFRQGKFRDVRLAKQQAAKLENMFNNMG 743
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +NL +IIK DV GS E L SL+ LSTD+V++QV+H+ VG I+ESD+NLAIAS A+
Sbjct: 744 DNQAQNLSVIIKADVQGSYEALAGSLQKLSTDEVRVQVLHSGVGGISESDVNLAIASGAL 803
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRAD + RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 804 IIGFNVRADGAARKLAENESVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQITGTVEIRQ 863
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +G ++RDSK+R++RN +I T EL SLKRFKD+VKEV+ GFEC
Sbjct: 864 VITVSKVGNIAGCMVTDGFVKRDSKVRVIRNNVVIHTSELSSLKRFKDDVKEVRMGFEC 922
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +G+ F
Sbjct: 457 VMGHVDHGKTSLLDYIRRTKVVAGEAGGITQHI-GAYHVETPKGVVTF------------ 503
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 504 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTVEAIAHAKAAGVPMVVAVNK 560
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 561 IDKEAANPERI 571
>gi|85711503|ref|ZP_01042561.1| GTP-binding regulator BipA/TypA [Idiomarina baltica OS145]
gi|85694655|gb|EAQ32595.1| GTP-binding regulator BipA/TypA [Idiomarina baltica OS145]
Length = 612
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/596 (57%), Positives = 436/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + RIMDSN++EKERGITI +KN +I +
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTLESRGELEERIMDSNDLEKERGITILAKNTAINWQDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DAV+GPMPQTRFVT+KA G PIVV+N
Sbjct: 75 RINILDTPGHADFGGEVERVMSMADSVLLLVDAVDGPMPQTRFVTQKAFAHGLNPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFPVIY SAL+G+A+ +++ G+M PLFE
Sbjct: 135 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFPVIYASALNGWASLDAEQSGGDMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + LQ+QI L+YSSYLG IGIGR+ G +K Q V I+ G D
Sbjct: 195 TIVDQVSHPDADPEGDLQMQISQLDYSSYLGVIGIGRVTQGSVKVNQQVTIV-GADGTTR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR+ A +GDI ITG+ E+ I T+C KPN L L +DEPT+
Sbjct: 254 NGKVGQVFNYLGLDRIDAQAAHAGDICAITGLGELKISDTVCAVGKPNPLKPLTVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+RQI RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKFVTSRQILERLQQELVHNVALRVEETDNPDK-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+LIENMRREG+EL+VSRP VI K G+ EPYE L VDIE+ +QG +M+KL R ++
Sbjct: 373 GVLIENMRREGFELAVSRPEVIIKHEEGQKMEPYETLTVDIEDQHQGAVMEKLGLRKAEM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +PSRGLIGFQ EF+TLT GTGL+ H F+ Y P + +G+R
Sbjct: 433 TDMNPDGKGRVRIDFEVPSRGLIGFQTEFMTLTSGTGLMYHTFDHYGPHKGGT---IGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKA+ Y+L+ LQ+RG+LF +H D VYEG IIGIH+R NDL VN +K KQL
Sbjct: 490 VNGVLISNAQGKALTYALFNLQERGKLFASHGDEVYEGQIIGIHNRSNDLTVNCLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI+ TLE A+EFINDDELVE+TP +IR+RKR L ENERK+
Sbjct: 550 TNVRASGTDDAQTLSPPIRYTLEQALEFINDDELVEVTPVSIRIRKRALTENERKR 605
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + I N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLESRGELEERIMDSNDLEKERGITILAKNTAINWQD 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 74 YRINILDTPGHADFGGEVERVMSMADSVLLLVDAVDGPMPQTRFVTQKAFAHGLNPIVVI 133
Query: 176 NKIDK 180
NKID+
Sbjct: 134 NKIDR 138
>gi|410613503|ref|ZP_11324560.1| GTP-binding protein TypA/BipA [Glaciecola psychrophila 170]
gi|410166937|dbj|GAC38449.1| GTP-binding protein TypA/BipA [Glaciecola psychrophila 170]
Length = 614
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/608 (55%), Positives = 452/608 (74%), Gaps = 5/608 (0%)
Query: 915 SDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQN-INARIMDSNEIEKERGITI 973
S+ +I L AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI
Sbjct: 4 SNTSIQNLRNIAIIAHVDHGKTTLVDKLLQQSGTLEASRGEAEERVMDSNDIEKERGITI 63
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+KN +I++N RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA
Sbjct: 64 LAKNTAIKWNEYRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKA 123
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
G KPIVV+NKID+ ARP+WV+D FDLFD L AT++QLDF V+Y SA++G+A +
Sbjct: 124 FAQGLKPIVVINKIDKPGARPDWVIDQVFDLFDNLGATDDQLDFQVVYASAINGWATNDL 183
Query: 1094 KARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
NM PLFE I+K+V + N PLQ+QI L+++SY+G IGIGRI SG +K+ Q
Sbjct: 184 DVPSDNMTPLFETIIKHVKPPVADINGPLQMQISQLDHNSYVGVIGIGRITSGSVKTNQA 243
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPN 1213
V ++ G D K KI Q++ + GL R+ V +GDIV ITG+ E+ I T+CDPS
Sbjct: 244 VTVI-GADGKTRNGKIGQVQGYLGLQRLEVESGDAGDIVAITGVGELKISDTVCDPSAVV 302
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
LP L++DEPT+T+ F VNNSP AG+EGKF+T+R I RL HE+ +N+ L+V + D
Sbjct: 303 ALPPLSVDEPTVTMTFQVNNSPFAGQEGKFVTSRNILERLQHELIHNVALKVEEIPTDPD 362
Query: 1274 IYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGI 1333
+ VSGRGELHL ILIENMRREGYEL+VSRP VI K ++G +EPYE++ +D+EE +QG
Sbjct: 363 KFRVSGRGELHLGILIENMRREGYELAVSRPEVILKQVDGVTHEPYESVTIDVEEQHQGS 422
Query: 1334 IMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
IM++L R G+L N+ + K R+R+++ IPSRGLIGFQ +F+T+T G+GL+ H F+ Y P
Sbjct: 423 IMEQLGTRKGELTNMAPDGKGRIRMDFMIPSRGLIGFQTDFMTMTSGSGLMYHTFDHYGP 482
Query: 1394 FYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDN 1453
+G+R++GVLI+ +GKA+ +L+ LQ RGRLFI H VYEGM+IGIH+R+N
Sbjct: 483 HKGGI---IGQRKSGVLIANATGKALTNALFNLQSRGRLFIGHGLEVYEGMVIGIHAREN 539
Query: 1454 DLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRF 1513
DL VN +K KQLTN+RSSG+DEA L+ PI ++LE A+EFI++DELVE+TP + R+RK+
Sbjct: 540 DLTVNALKGKQLTNVRSSGTDEAQSLVPPIVMSLEQALEFIDNDELVEVTPISTRIRKKL 599
Query: 1514 LKENERKK 1521
L EN RK+
Sbjct: 600 LTENLRKQ 607
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D ++++ + + G + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLEASRGEAEERVMDSNDIEKERGITILAKNTAIKWN 73
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+L+V A +G MPQTR A G+ IV
Sbjct: 74 EYRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVV 133
Query: 175 INKIDK 180
INKIDK
Sbjct: 134 INKIDK 139
>gi|127514481|ref|YP_001095678.1| GTP-binding protein TypA [Shewanella loihica PV-4]
gi|126639776|gb|ABO25419.1| GTP-binding protein TypA [Shewanella loihica PV-4]
Length = 607
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/596 (57%), Positives = 439/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLAQSGTLETRGEAAERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDCVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + + +M PLFE
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPEETGADMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ Q+QI L+Y+SY+G IG+GRI G +K Q V ++ G D
Sbjct: 189 TIVEKVSSPDADAEGAFQMQISQLDYNSYVGVIGVGRIKRGSVKVNQQVTVV-GADGTTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI Q+ + GLDR V EA +GDIV ITG+ E+ I T+C LP L++DEPTL
Sbjct: 248 NGKIGQVLGYMGLDRHEVAEANAGDIVAITGLGELKISDTVCAVGNAEALPPLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++GE EPYE L VD+EE +QG +++KL R D+
Sbjct: 367 SILIENMRREGYELAVSRPEVIVKEIDGEKCEPYETLTVDVEEEHQGAVIEKLGTRKADM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P D+G+R
Sbjct: 427 RDMQPDGKGRVRIDFIIPSRGLIGFQTEFMTATSGTGLIYHSFDHYGPVKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +GKA+ ++L+ LQDRGRL I H VYEG ++GIHSR NDL VN +K KQL
Sbjct: 484 QNGVLISNATGKALTFALFGLQDRGRLMIGHAAEVYEGQVVGIHSRANDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L I++TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEAQVLTPHIQMTLEQALEFIDDDELVEVTPQSIRVRKRHLTENDRKR 599
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLAQSGTLETRGEAAERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDCVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|383933704|ref|ZP_09987148.1| GTP-binding protein TypA/BipA [Rheinheimera nanhaiensis E407-8]
gi|383705310|dbj|GAB57239.1| GTP-binding protein TypA/BipA [Rheinheimera nanhaiensis E407-8]
Length = 611
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/604 (56%), Positives = 444/604 (73%), Gaps = 5/604 (0%)
Query: 918 NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKN 977
N+ L AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN E ERGITI +KN
Sbjct: 7 NLEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDARAKMQERVMDSNAQESERGITILAKN 66
Query: 978 CSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLG 1037
S+ +NG INI+DTPGHADFGGEVER+LSM D+VLLL+DAV+GPMPQTRFVT+KA G
Sbjct: 67 TSVRWNGYHINILDTPGHADFGGEVERVLSMADSVLLLVDAVDGPMPQTRFVTQKAFAHG 126
Query: 1038 FKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQ 1097
KPIVVVNKIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +
Sbjct: 127 LKPIVVVNKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGWATLDYNEPK 186
Query: 1098 GNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIM 1157
++ LF+AI+ +V + QLQ+ L+YSSYLG IGIGRI G +K Q V I+
Sbjct: 187 TDITDLFQAIVDHVAPPAVELDGETQLQVSQLDYSSYLGIIGIGRIKRGNLKPNQQVTIV 246
Query: 1158 NGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPM 1217
+ K N K+ Q+ + GL+RV EA +GDIV TG+ E+ I TIC SK LP
Sbjct: 247 SADGSKRN-GKVGQVFGYLGLERVETTEATAGDIVAFTGLGELKISDTICATSKVEALPA 305
Query: 1218 LNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEV 1277
L +DEPT+T+ F VN SP AG+EGKF+T+RQI RL HE+K+N+ LRV + D ++V
Sbjct: 306 LQVDEPTVTMTFQVNTSPFAGKEGKFVTSRQILERLQHELKHNVALRVEETDDGDK-FKV 364
Query: 1278 SGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQK 1337
SGRGELHL +LIENMRREG+EL+VSRP VI KT++G EP EN+ +D EE +QG IM++
Sbjct: 365 SGRGELHLGVLIENMRREGFELAVSRPEVIMKTVDGVKMEPMENVTIDCEEQHQGSIMER 424
Query: 1338 LNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNK 1397
+ R ++ N++ + K R+R+++ +PSRGLIGF+ EF+T+T GTGL+ H F+ Y
Sbjct: 425 MGERKAEMTNMQPDGKGRIRMDFTMPSRGLIGFRTEFMTITSGTGLMYHSFDHYGEHKGG 484
Query: 1398 SKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLV 1457
S +G+R NGV+IS GKA Y+++ LQ+RGR+FI+H + VYEG +IGIHSR NDL V
Sbjct: 485 S---IGQRTNGVMISNAMGKAAGYAIFSLQERGRMFISHAEEVYEGQVIGIHSRSNDLTV 541
Query: 1458 NPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKEN 1517
N +K KQLTN+R+SG+DEAI L+ PI+ TLE A+EFI+DDELVE+TPK+IR+RKR L E+
Sbjct: 542 NCLKGKQLTNVRASGTDEAINLVPPIRYTLEQALEFIDDDELVEVTPKSIRIRKRHLTES 601
Query: 1518 ERKK 1521
+RK+
Sbjct: 602 DRKR 605
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
++TA +L + + I+ HVDHGKT+L+D + + + F + + + N + IT
Sbjct: 2 SVTATNLEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDARAKMQERVMDSNAQESERGIT 61
Query: 120 FL----------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAH 163
L DTPGH F R + D V+L+V A DG MPQTR
Sbjct: 62 ILAKNTSVRWNGYHINILDTPGHADFGGEVERVLSMADSVLLLVDAVDGPMPQTRFVTQK 121
Query: 164 AKISGVPLIVAINKIDK 180
A G+ IV +NKID+
Sbjct: 122 AFAHGLKPIVVVNKIDR 138
>gi|372277214|ref|ZP_09513250.1| GTP-binding protein TypA [Pantoea sp. SL1_M5]
gi|390437328|ref|ZP_10225866.1| GTP-binding protein TypA [Pantoea agglomerans IG1]
Length = 607
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+I+ SAL+G A +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIFASALNGIAGLEHTDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + ++ PLQ+QI L+Y++YLG IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVAPPQVEADAPLQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPQNVQALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +DIEE NQG +MQ + R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDIEENNQGSVMQAMGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYDDI---RAGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PIK+TLE AIEFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPIKMTLEQAIEFIDDDELVEVTPQSVRIRKRHLTENDRKR 599
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|336316424|ref|ZP_08571323.1| GTP-binding protein TypA/BipA [Rheinheimera sp. A13L]
gi|335879293|gb|EGM77193.1| GTP-binding protein TypA/BipA [Rheinheimera sp. A13L]
Length = 610
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN E ERGITI +KN S+ +NG
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTFDARAKLQERVMDSNAQESERGITILAKNTSVRWNGY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSM D+VLLL+DAVEGPMPQTRFVT+KA G KPIVVVN
Sbjct: 75 HINILDTPGHADFGGEVERVLSMADSVLLLVDAVEGPMPQTRFVTQKAFAHGLKPIVVVN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SA++G+A + + ++ LF
Sbjct: 135 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASAINGWATLDYNEPKTDINDLFA 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V K N Q+Q+ L+YSSYLG IGIGRI G +K Q V ++ G D
Sbjct: 195 AIVEHVAPPKVELNGDTQIQVSQLDYSSYLGIIGIGRIKRGTLKPNQQVTVI-GADGNKR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ Q+ + GL+R+ EA +GDIV TG+ E+ I TIC P+ + LP L +DEPT+
Sbjct: 254 NAKVGQVFGYLGLERIEATEANAGDIVAFTGLGELKISDTICAPNNLDPLPALQVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+RQI +RL+ E+K+N+ LRV + + D ++VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKFVTSRQILDRLNAELKHNVALRVEETEDGDK-FKVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+LIENMRREG+EL+VSRP VI + +G EP EN+ +D+EE +QG IM+K+ R DL
Sbjct: 373 GVLIENMRREGFELAVSRPEVIMRVEDGVKTEPMENVTIDVEEQHQGSIMEKMGERKADL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N++ + K R+R+++ +PSRGLIGF+ EF+TLT GTGL+ H F+ Y P+ + +G+R
Sbjct: 433 TNMQPDGKGRIRMDFNMPSRGLIGFRTEFMTLTSGTGLMYHSFDCYGPYKGGT---IGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA Y+++ LQ+RGR+FI+H + VYEG +IGIHSR NDL VN +K KQL
Sbjct: 490 MNGVLISNATGKAAGYAIFSLQERGRMFISHAEEVYEGQVIGIHSRSNDLTVNCLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L+ PI+ LE A+EFI+DDELVE+TP +IR+RKR L EN+RK+
Sbjct: 550 TNVRASGTDEAINLVPPIRYALEQALEFIDDDELVEVTPASIRIRKRHLTENDRKR 605
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 16/135 (11%)
Query: 62 TAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL 121
TA ++ + V I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 4 TASAIEKLRNVAIIAHVDHGKTTLVDKLLQQSGTFDARAKLQERVMDSNAQESERGITIL 63
Query: 122 ----------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAK 165
DTPGH F R + D V+L+V A +G MPQTR A
Sbjct: 64 AKNTSVRWNGYHINILDTPGHADFGGEVERVLSMADSVLLLVDAVEGPMPQTRFVTQKAF 123
Query: 166 ISGVPLIVAINKIDK 180
G+ IV +NKID+
Sbjct: 124 AHGLKPIVVVNKIDR 138
>gi|340361787|ref|ZP_08684201.1| translation initiation factor IF2 [Neisseria macacae ATCC 33926]
gi|339888207|gb|EGQ77683.1| translation initiation factor IF2 [Neisseria macacae ATCC 33926]
Length = 972
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 407 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGVEA 465
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 466 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 525
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 526 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 585
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 586 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGINIDALLEAVLLEAEVLELTAPVD 645
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK + EAGP
Sbjct: 646 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAVNEAGP 705
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 706 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 765
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 766 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 825
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G+ EIRQ
Sbjct: 826 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQVTGMVEIRQ 885
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 886 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 945
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 946 LMIKGYNEIMEG-DQLECFDI 965
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 479 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 525
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 526 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 582
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 583 IDKEAANPERI 593
>gi|83643909|ref|YP_432344.1| stress response membrane GTPase [Hahella chejuensis KCTC 2396]
gi|83631952|gb|ABC27919.1| predicted membrane GTPase involved in stress response [Hahella
chejuensis KCTC 2396]
Length = 605
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+ E+ERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGRKDMDAERVMDSNDQERERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVV DLFD+L ATEEQLDFPVIY SAL+G A A Q +M PLFE
Sbjct: 129 KVDRPGARPDWVVGEVMDLFDRLGATEEQLDFPVIYASALNGIAGLEPDALQQDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+++ VP + N P Q+QI +L+Y+SY+G IGIGR+ G++K+ VV+++ K N
Sbjct: 189 MVVEKVPAPSVDVNGPFQMQISALDYNSYVGVIGIGRVSRGKVKTNTPVVVVDRDGGKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ + + GL RV V EA +GDI+ +TG++E+ I T+C P +P LP L +DEPT+
Sbjct: 249 -GRVLTVMGYHGLQRVDVPEAEAGDIICVTGLDELNISDTLCSPERPEALPALIVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGK++T+R IK RL+ E+ N+ LRV Q D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKYVTSRNIKERLEKELLYNVALRVEQGDSPDK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL VSRP VI K ++G+ EPYE + +D+E+ +QG IM+ + R G+L
Sbjct: 367 SVLIETMRREGFELGVSRPEVIVKEIDGQKVEPYEQVIIDVEDEHQGSIMEVMGLRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R RLE+ +PSRGLIGF+++F+T+T GTG+++H+F+ Y P + R
Sbjct: 427 VNMIPDGKGRTRLEFIVPSRGLIGFRSQFLTMTSGTGILTHIFDHYGPVKEGVNVE---R 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GK +AY+L+ LQDRGRLF++ N VYEGMIIG+HSRDNDL+VNP K KQL
Sbjct: 484 NNGVLISNVAGKVLAYALFNLQDRGRLFVDPNIEVYEGMIIGLHSRDNDLVVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++G+DE I L PI+ +LE A+EF+ DDELVE+TP NIR+RK+ LKE+ERK+
Sbjct: 544 TNIRAAGTDENILLTPPIRFSLEQALEFVEDDELVEVTPSNIRIRKKLLKEHERKR 599
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGRKDMDAERVMDSNDQERERGITILAKNTAIKWND 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLKPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|410637234|ref|ZP_11347817.1| GTP-binding protein TypA/BipA [Glaciecola lipolytica E3]
gi|410143152|dbj|GAC15022.1| GTP-binding protein TypA/BipA [Glaciecola lipolytica E3]
Length = 623
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 26 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 85
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 86 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 145
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A + + +M LF+
Sbjct: 146 KIDKPGARPDWVMDQVFDLFDNLGATDDQLDFQVVYASALNGWATREADQKAEDMTDLFQ 205
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + P Q+QI L+Y+SY+G IG+GR+ G +K Q V I+ K N
Sbjct: 206 TIVDVVEAPNADPAGPFQMQISQLDYNSYVGVIGVGRVTRGAVKPNQQVTIVMADGTKRN 265
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q++ + GL R V+ A +GDI+ ITG+ E+ I TICDPS LP L++DEPT+
Sbjct: 266 -GKVGQVQGYLGLQRHEVDSAQAGDIIAITGLGELKISDTICDPSAVEALPQLSVDEPTV 324
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL +E+ +N+ L+V + + D + VSGRGELHL
Sbjct: 325 TMTFQVNTSPFAGKEGKYVTSRNILERLQNELVHNVALKVEETEDPDK-FRVSGRGELHL 383
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI K ++GE +EP+E L +D EE +QG +M+++ R G+L
Sbjct: 384 GILIENMRREGYELAVSRPEVILKEIDGETHEPFETLTIDAEEEHQGSVMEQIGLRKGEL 443
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+R+++ IPSRGLIGFQ +F+T+T G+GLI H F+ Y P S +G+R
Sbjct: 444 TNMSPDGKGRIRMDFMIPSRGLIGFQTDFMTMTSGSGLIYHTFDHYGPHKGGS---IGQR 500
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 501 KNGVLIANATGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 560
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PIK++LE A+EFI++DELVE+TP +IR+RK+ L ENERK+
Sbjct: 561 TNVRASGTDEAQTLVPPIKMSLEQALEFIDNDELVEVTPVSIRIRKKLLTENERKR 616
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 25 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 84
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 85 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 144
Query: 176 NKIDK 180
NKIDK
Sbjct: 145 NKIDK 149
>gi|255066628|ref|ZP_05318483.1| translation initiation factor IF-2 [Neisseria sicca ATCC 29256]
gi|255049212|gb|EET44676.1| translation initiation factor IF-2 [Neisseria sicca ATCC 29256]
Length = 972
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 407 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGVEA 465
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 466 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 525
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 526 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 585
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 586 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGINIDALLEAVLLEAEVLELTAPVD 645
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK + EAGP
Sbjct: 646 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAVNEAGP 705
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 706 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 765
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 766 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 825
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G+ EIRQ
Sbjct: 826 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQVTGMVEIRQ 885
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 886 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 945
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 946 LMIKGYNEIMEG-DQLECFDI 965
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 479 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 525
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 526 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 582
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 583 IDKEAANPERI 593
>gi|197265779|ref|ZP_03165853.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197244034|gb|EDY26654.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
Length = 607
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIIDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ N A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSNIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PIK++LE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVILVPPIKMSLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|333986205|ref|YP_004515415.1| GTP-binding protein TypA [Methylomonas methanica MC09]
gi|333810246|gb|AEG02916.1| GTP-binding protein TypA [Methylomonas methanica MC09]
Length = 602
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + ++ R+MDSN +EKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDQLLQQSGTFDAHTKVDERVMDSNALEKERGITILAKNTAIDWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA LG KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFALGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD TFDLFD L AT+EQLDFP++Y SAL+G+A + G+M PLF+
Sbjct: 129 KVDRPGARPDWVVDQTFDLFDNLGATDEQLDFPIVYASALNGFAGLEADVSGGDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + P Q+Q+ISL+Y+SY+G IGIGRI G++ + I++ + K
Sbjct: 189 TIVDKVAPPPVEIDAPFQMQVISLDYNSYVGVIGIGRIQHGKVTRNMPLTIVDN-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ ++ F GL+R+ V A +GDI+ G+E + I T+CDP+ LP L++DEPT+
Sbjct: 248 NGRMLKLYGFHGLERIEVETAQAGDIIAFCGVENLKISETLCDPNNVVALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGREGKFITTRQI +RL E+++N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGREGKFITTRQIYDRLQKELQHNVALRV-ETTDDPDKFKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL VSRP+VI K ++G EPYEN+ +++EE +QG IM+KL R GDL
Sbjct: 367 SVLIENMRREGFELGVSRPQVIIKEIDGVKSEPYENVTIEVEEQHQGTIMEKLGDRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RLEY +PSRGL+GFQ EF+T T G+GL HVF+ Y P + +G R
Sbjct: 427 KDMVPDGKGRIRLEYIVPSRGLLGFQTEFLTATSGSGLFYHVFDHYGPVKEGA---VGNR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS GKAV YSL+ LQ RG L + + D +YEG ++GIHSR+NDL+VNP K K L
Sbjct: 484 VRGVLISMSKGKAVDYSLYPLQARGELLVVNGDEIYEGQLVGIHSRNNDLVVNPTKPKPL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+++ K+TLE A+EFI+DDELVE+TPK+IRLRK L ENERK+
Sbjct: 544 TNVRASGTDDSLTCAKIQKMTLEQALEFISDDELVEVTPKSIRLRKILLTENERKR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLQQSGTFDAHTKVDERVMDSNALEKERGITILAKNTAIDWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFALGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|16767274|ref|NP_462889.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167995115|ref|ZP_02576205.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|374979500|ref|ZP_09720835.1| GTP-binding protein TypA/BipA [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|378447346|ref|YP_005234978.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378452915|ref|YP_005240275.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378701866|ref|YP_005183824.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378986692|ref|YP_005249848.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378991290|ref|YP_005254454.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379703250|ref|YP_005244978.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383498608|ref|YP_005399297.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|422028244|ref|ZP_16374556.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422033295|ref|ZP_16379373.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427556596|ref|ZP_18929879.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427574517|ref|ZP_18934470.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427595821|ref|ZP_18939385.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427620396|ref|ZP_18944266.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427644118|ref|ZP_18949154.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427658264|ref|ZP_18953878.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427663523|ref|ZP_18958781.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427680618|ref|ZP_18963671.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|427801586|ref|ZP_18969130.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
gi|11024631|emb|CAC14270.1| BipA GTPase [Salmonella typhimurium]
gi|16422571|gb|AAL22848.1| GTP-binding elongation factor family protein [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|205327148|gb|EDZ13912.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|261249125|emb|CBG26986.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267996294|gb|ACY91179.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160515|emb|CBW20045.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312915121|dbj|BAJ39095.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321225292|gb|EFX50350.1| GTP-binding protein TypA/BipA [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323132349|gb|ADX19779.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|332990837|gb|AEF09820.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|380465429|gb|AFD60832.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|414011993|gb|EKS95926.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414013217|gb|EKS97104.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414013464|gb|EKS97349.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414027147|gb|EKT10391.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414028040|gb|EKT11241.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414030493|gb|EKT13591.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414041514|gb|EKT24084.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414041881|gb|EKT24433.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414046505|gb|EKT28826.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414055431|gb|EKT37324.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|414061609|gb|EKT42998.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm5]
Length = 607
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ N A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSNIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PIK++LE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVILVPPIKMSLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|319941973|ref|ZP_08016294.1| translation initiation factor IF-2 [Sutterella wadsworthensis
3_1_45B]
gi|319804626|gb|EFW01496.1| translation initiation factor IF-2 [Sutterella wadsworthensis
3_1_45B]
Length = 949
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/539 (61%), Positives = 428/539 (79%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LM +GQMVTINQ+LDQ+TAM++VEEMGH A A+K +DPE++L E
Sbjct: 384 MSVKATEVIKTLMTMGQMVTINQMLDQDTAMLVVEEMGHKAIAAKADDPEAYL-GELETK 442
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ R P+VTIMGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 443 EEYPARPRPPVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVKTPRGIITF 502
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT EAI+HA+ +GVPL+VAINKIDK
Sbjct: 503 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTLEAISHARAAGVPLVVAINKIDK 562
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++ V+PEEYGG PF +SAK+G G+++LLEN+ LQAE+LELKAP
Sbjct: 563 PEANPDRVKQELVNAGVLPEEYGGDVPFCPVSAKSGQGVDELLENVLLQAEMLELKAPNE 622
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G++IESRLDKG+GPVA++L+QSG L D+V+ GA +GR+R+MLNE GK AGP
Sbjct: 623 GPARGLVIESRLDKGRGPVASILVQSGMLHRGDVVLVGAEFGRVRAMLNEFGKAQQSAGP 682
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +G+E+ + +E+KAREI LFRQGK+RDVKL+KQ N+F+D+
Sbjct: 683 SIPVEIQGLSGVPQAGDEVIALSDERKAREIALFRQGKYRDVKLAKQHATNLANLFSDVG 742
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + K L +IIK DV GS+E L +L LST +V++ V+H AVG I+ESD+NLA ASK +
Sbjct: 743 EGEAKTLPLIIKADVQGSQEALIHALTQLSTSEVRVSVVHAAVGGISESDVNLAAASKGV 802
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RK+A+ ++IRY+NIIY+ + ++K+ ++ ++ EK+E LGL EIRQ
Sbjct: 803 IIGFNVRADAQARKVAEAEGVDIRYYNIIYDAVDDVKAALSGMLSPEKRETALGLVEIRQ 862
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+I V KV IAGC +LEG++RR++ +R+LR+ +IWTGEL SLK FKD+V+EVKAG EC
Sbjct: 863 IIRVPKVGNIAGCRVLEGVVRRNANVRLLRDNVVIWTGELASLKHFKDDVREVKAGQEC 921
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+L+D++ R + I I + ++ RGI F
Sbjct: 456 IMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVKTPRGIITF------------ 502
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V +NK
Sbjct: 503 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTLEAISHARAAGVPLVVAINK 559
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 560 IDKPEANPDRV 570
>gi|440289766|ref|YP_007342531.1| GTP-binding protein TypA/BipA [Enterobacteriaceae bacterium strain
FGI 57]
gi|440049288|gb|AGB80346.1| GTP-binding protein TypA/BipA [Enterobacteriaceae bacterium strain
FGI 57]
Length = 607
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/598 (56%), Positives = 453/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ ++A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSDQAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETPDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPLSIRIRKRHLTENDRKRAM 601
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|54295649|ref|YP_128064.1| hypothetical protein lpl2737 [Legionella pneumophila str. Lens]
gi|397665416|ref|YP_006506954.1| GTP-binding protein [Legionella pneumophila subsp. pneumophila]
gi|53755481|emb|CAH16980.1| hypothetical protein lpl2737 [Legionella pneumophila str. Lens]
gi|307611693|emb|CBX01387.1| hypothetical protein LPW_30791 [Legionella pneumophila 130b]
gi|395128827|emb|CCD07047.1| GTP-binding protein [Legionella pneumophila subsp. pneumophila]
Length = 608
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/596 (58%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+Q+GT + R+MDSN +EKERGITI +KN + + G
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIVV+N
Sbjct: 69 QINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A + QLDFPV+YTSAL+GYA N + +M L +
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGANDTQLDFPVVYTSALNGYAKLNLEDNATDMSALLQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V ++N P Q+QI SL+YSSY+G IGIGRI G+IK+ V I++ D
Sbjct: 189 TIVDKVTPPCVDANGPFQMQISSLDYSSYVGTIGIGRITRGQIKAKSPVKIID-KDGNMR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ FKGL+RV V EA +GDI+ ITGIE + I TICDP+ LP L +DEPT+
Sbjct: 248 SGRLLQLLGFKGLERVEVEEASAGDIIAITGIESLNISDTICDPNLVEALPALLVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SPLAG+EGK++T+R+I+ RL+ E+ +N+ LRV ++ D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPLAGQEGKYVTSRKIRERLNTELLHNVALRV-EDCDDPDKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREGYEL++S+P VI + ++GE EPYE+L VD+EE +QG IM+KL R G++
Sbjct: 367 SILIETMRREGYELAISKPEVIIREVDGEQQEPYEHLTVDVEESHQGTIMEKLGERRGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + K RVRL+Y IP+RGLIGF NEF++ T GTGL+ HVF+ Y P K +GKR
Sbjct: 427 QNMVPDGKGRVRLDYIIPTRGLIGFHNEFLSCTSGTGLMYHVFDHYGPLI---KGRIGKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV+I+ G A A++L+ LQ+RGRLF+ + YEGMI+GIH+RDNDL+VN KEKQL
Sbjct: 484 LNGVMIANCPGTARAFALFNLQERGRLFLEPQSVCYEGMIVGIHARDNDLVVNVTKEKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SGSDE I L P+K++LE A+EFI+DDELVE+TP +IRLRK+FLKE++RKK
Sbjct: 544 TNIRASGSDENIILTPPVKLSLEQALEFIDDDELVEVTPLSIRLRKKFLKEHDRKK 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + +E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YQINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|294142889|ref|YP_003558867.1| virulence regulator BipA [Shewanella violacea DSS12]
gi|9857266|dbj|BAB11925.1| YIHK [Shewanella violacea]
gi|293329358|dbj|BAJ04089.1| virulence regulator BipA [Shewanella violacea DSS12]
Length = 609
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/600 (56%), Positives = 447/600 (74%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 15 AIIAHVDHGKTTLVDKLLAQSGTLETRGEAAERVMDSNDLEKERGITILAKNTAIKWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA LG KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFALGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +G+M PLFE
Sbjct: 135 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFAGLEPEITEGDMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V ++ LQ+QI ++Y++Y+G IGIGRI G IK+ Q V I++ K N
Sbjct: 195 TIVEKVSSPDADATGDLQMQISQIDYNNYVGVIGIGRIKRGSIKTNQQVTIISADGTKRN 254
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V +GDIV ITG+ ++ I T+C + LP L++DEPTL
Sbjct: 255 -GKVGQVLGYMGLDRNEVEIGNAGDIVAITGLGQLLISDTVCATTNVEALPPLSVDEPTL 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKYVTSRNIFERLQRELVHNVALRVEETESPDR-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI K ++GE+ EP+ENL VDIEE +QG +++KL R D+
Sbjct: 373 SILIENMRREGYELAVSRPEVIVKEIDGEMCEPFENLTVDIEEQHQGSVIEKLGIRKADM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ +F+T T G+GLI H F+ Y P D+G+R
Sbjct: 433 KDMQLDGKGRVRIDFVIPSRGLIGFQTDFMTATSGSGLIYHSFDHYGPVKGG---DIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS +GKA+ ++L+ LQ RGRLFI H VYEG ++G+H+R NDL VN +K KQL
Sbjct: 490 ARGVLISNGTGKALTFALFNLQARGRLFIGHAAEVYEGQVVGLHARANDLTVNCLKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA L PI +TLE A+EFI+DDELVE+TP N+R+RKR+L EN+RK+ K
Sbjct: 550 TNMRASGTDEAQVLTPPINMTLEQALEFIDDDELVEVTPLNVRVRKRYLNENDRKRHNRK 609
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + G + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLAQSGTLETRGEAAERVMDSNDLEKERGITILAKNTAIKWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFALGLKPIVVI 133
Query: 176 NKIDK 180
NKID+
Sbjct: 134 NKIDR 138
>gi|54298810|ref|YP_125179.1| hypothetical protein lpp2875 [Legionella pneumophila str. Paris]
gi|148361135|ref|YP_001252342.1| virulence regulator BipA [Legionella pneumophila str. Corby]
gi|296108465|ref|YP_003620166.1| typA virulence regulator BipA [Legionella pneumophila 2300/99 Alcoy]
gi|53752595|emb|CAH14028.1| hypothetical protein lpp2875 [Legionella pneumophila str. Paris]
gi|148282908|gb|ABQ56996.1| virulence regulator BipA [Legionella pneumophila str. Corby]
gi|295650367|gb|ADG26214.1| typA virulence regulator BipA [Legionella pneumophila 2300/99 Alcoy]
Length = 608
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/596 (58%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+Q+GT + R+MDSN +EKERGITI +KN + + G
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIVV+N
Sbjct: 69 QINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A + QLDFPV+YTSAL+GYA N + +M L +
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGANDTQLDFPVVYTSALNGYAKLNLEDNATDMSALLQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V ++N P Q+QI SL+YSSY+G IGIGRI G+IK+ V I++ D
Sbjct: 189 TIVDKVTPPCVDANGPFQMQISSLDYSSYVGTIGIGRITRGQIKAKSPVKIID-KDGNMR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ FKGL+RV V EA +GDI+ ITGIE + I TICDP+ LP L +DEPT+
Sbjct: 248 SGRLLQLLGFKGLERVEVEEASAGDIIAITGIESLNISDTICDPNLVEALPALLVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SPLAG+EGK++T+R+I+ RL+ E+ +N+ LRV ++ D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPLAGQEGKYVTSRKIRERLNTELLHNVALRV-EDCDDPDKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREGYEL++S+P VI + ++GE EPYE+L VD+EE +QG IM+KL R G++
Sbjct: 367 SILIETMRREGYELAISKPEVIIREVDGEQQEPYEHLTVDVEENHQGTIMEKLGERRGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + K RVRL+Y IP+RGLIGF NEF++ T GTGL+ HVF+ Y P K +GKR
Sbjct: 427 QNMVPDGKGRVRLDYIIPTRGLIGFHNEFLSCTSGTGLMYHVFDHYGPLI---KGRIGKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV+I+ G A A++L+ LQ+RGRLF+ + YEGMI+GIH+RDNDL+VN KEKQL
Sbjct: 484 LNGVMIANCPGTARAFALFNLQERGRLFLEPQSVCYEGMIVGIHARDNDLVVNVTKEKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SGSDE I L P+K++LE A+EFI+DDELVE+TP +IRLRK+FLKE++RKK
Sbjct: 544 TNIRASGSDENIILTPPVKLSLEQALEFIDDDELVEVTPLSIRLRKKFLKEHDRKK 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + +E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YQINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|389811579|ref|ZP_10206158.1| GTP-binding protein TypA/BipA [Rhodanobacter thiooxydans LCS2]
gi|388440307|gb|EIL96704.1| GTP-binding protein TypA/BipA [Rhodanobacter thiooxydans LCS2]
Length = 608
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/600 (56%), Positives = 448/600 (74%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLNERTVLAERVMDSNDQEKERGITILAKNTAITWNGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA+ + R+G+M PL+E
Sbjct: 130 KVDRPGARPEWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYASLSDDVREGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q++I L+Y++++G IGIGRI G +K V +++ K
Sbjct: 190 AIMQHVSKPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMPVAVID-RHGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ A +GDIV I+GI ++ I TIC P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFMGLERIEQETAEAGDIVAISGIADLTISDTICALDTPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+K+RL+ E +N+ L+V Q D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLKDRLEREQVHNVALKVEQGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+ EP E L VD+EE +QG +M++L R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGQKMEPIEQLVVDVEETHQGPVMERLGMR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRLEY IP+RGLIGFQN+F TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLEYMIPARGLIGFQNQFKTLTQGSGLLFHVFDHYGP---KEEGQ 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+I+ G AYSL LQDRG+LF D VYEG ++GIH++DNDL VN IK
Sbjct: 485 IAKRLNGVMIANAGGTTPAYSLGPLQDRGKLFAAEGDNVYEGQLVGIHAKDNDLTVNVIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AIQL IK TLE A++FI+DDELVE+TPK IRLRK+ L EN+RK+
Sbjct: 545 PKPLTNMRASGKDDAIQLTPAIKFTLEQALDFIDDDELVEVTPKEIRLRKKHLTENDRKR 604
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + K + +E + + + N + N
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLNERTVLAERVMDSNDQEKERGITILAKNTAITWNG 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+++V A DG MPQTR A G IV I
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|52843018|ref|YP_096817.1| virulence regulator BipA [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|378778703|ref|YP_005187145.1| virulence regulator BipA [Legionella pneumophila subsp. pneumophila
ATCC 43290]
gi|52630129|gb|AAU28870.1| virulence regulator BipA [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|364509521|gb|AEW53045.1| virulence regulator BipA [Legionella pneumophila subsp. pneumophila
ATCC 43290]
Length = 608
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/596 (58%), Positives = 450/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+Q+GT + R+MDSN +EKERGITI +KN + + G
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIVV+N
Sbjct: 69 QINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A + QLDFPV+YTSAL+GYA N + +M L +
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGANDTQLDFPVVYTSALNGYAKLNLEDNATDMSALLQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V ++N P Q+QI SL+YSSY+G IGIGRI G+IK+ V I++ D
Sbjct: 189 TIVDKVTPPCVDANGPFQMQISSLDYSSYVGTIGIGRITRGQIKAKSPVKIID-KDGNMR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ FKGL+RV V EA +GDI+ ITGIE + I TICDP+ LP L +DEPT+
Sbjct: 248 SGRLLQLLGFKGLERVEVEEASAGDIIAITGIESLNISDTICDPNLVEALPALLVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SPLAG+EGK++T+R+I+ RL+ E+ +N+ LRV ++ D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPLAGQEGKYVTSRKIRERLNTELLHNVALRV-EDCDDPDKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREGYEL++S+P VI + + GE EPYE+L VD+EE +QG IM+KL R G++
Sbjct: 367 SILIETMRREGYELAISKPEVIIREVEGEQQEPYEHLTVDVEENHQGTIMEKLGERRGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + K RVRL+Y IP+RGLIGF NEF++ T GTGL+ HVF+ Y P K +GKR
Sbjct: 427 QNMVPDGKGRVRLDYIIPTRGLIGFHNEFLSCTSGTGLMYHVFDHYGPLI---KGRIGKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV+I+ G A A++L+ LQ+RGRLF+ + YEGMI+GIH+RDNDL+VN KEKQL
Sbjct: 484 LNGVMIANCPGTARAFALFNLQERGRLFLEPQSVCYEGMIVGIHARDNDLVVNVTKEKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SGSDE I L P+K++LE A+EFI+DDELVE+TP +IRLRK+FLKE++RKK
Sbjct: 544 TNIRASGSDENIILTPPVKLSLEQALEFIDDDELVEVTPLSIRLRKKFLKEHDRKK 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + +E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YQINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|417692299|ref|ZP_12341497.1| GTP-binding protein TypA/BipA [Shigella boydii 5216-82]
gi|332084071|gb|EGI89276.1| GTP-binding protein TypA/BipA [Shigella boydii 5216-82]
Length = 607
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ +NG EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREINGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|294670562|ref|ZP_06735441.1| hypothetical protein NEIELOOT_02284 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307687|gb|EFE48930.1| hypothetical protein NEIELOOT_02284 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 566
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/562 (60%), Positives = 447/562 (79%), Gaps = 4/562 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 1 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGEEL 59
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
I AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G +TF
Sbjct: 60 IEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVQTPRGVVTF 119
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 120 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTVEAIAHAKAAGVPIVVAVNKIDK 179
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG + FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 180 EAANPERIRQELTQHEVIPDDWGGTTQFIDVSAKKGINIDALLEAVLLEAEVLELTAPVE 239
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK I EAGP
Sbjct: 240 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMMDENGKAITEAGP 299
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGKFRDV+L+KQ+ K ENMF+++
Sbjct: 300 SIPVEILGLSDVPNAGEDAIVLADEKKAREIALFRQGKFRDVRLAKQQAAKLENMFSNMG 359
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+NL +IIK DV GS E L SL+ LSTD+V++QV+H+ VG I ESD+NLAIAS A
Sbjct: 360 EGQVQNLSVIIKADVQGSYEALAGSLQKLSTDEVRVQVLHSGVGGITESDVNLAIASGAF 419
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 420 IIGFNVRADASARKLAENEDVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 479
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN ++ +GEL SLKR+KD+VKEV+ GFEC
Sbjct: 480 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVVHSGELSSLKRYKDDVKEVRMGFECG 539
Query: 541 RLSRIENQI-QRDISEIIAFDI 561
+ + N I + D+ E FDI
Sbjct: 540 LMIKGYNDIMEGDVLE--CFDI 559
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 73 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVQTPRGVVTF------------ 119
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 120 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTVEAIAHAKAAGVPIVVAVNK 176
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 177 IDKEAANPERI 187
>gi|347817733|ref|ZP_08871167.1| translation initiation factor IF-2, partial [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 655
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/539 (60%), Positives = 435/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK LMK+GQMVTINQ LDQ+TAMI+VEE+GH A + L+DPE+F ++ +
Sbjct: 90 MSIKASEVIKALMKMGQMVTINQPLDQDTAMIVVEELGHKAVVAALDDPEAFADDDVAQQ 149
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T G ++F
Sbjct: 150 -NAEVLPRAPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVETPRGMVSF 208
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 209 LDTPGHEAFTAMRARGARATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAITKADK 268
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR++Q+L++E+V+PEEYGG SPF+++S+KTG GI+ LLE + LQAE+LEL+APV
Sbjct: 269 PDANPDRVRQELVTEEVLPEEYGGDSPFVAVSSKTGAGIDALLEQVLLQAEVLELRAPVD 328
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
T AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG +YGR+R+ML+E G++ AGP
Sbjct: 329 TLAKGLVIEAQLDKGRGPVATVLVQSGTLKAGDVVLAGQTYGRVRAMLDETGRSTKTAGP 388
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL++Q+ K ENM +
Sbjct: 389 SIPVEIQGLTEVPQAGDEFMVLTDERRAREIATYRAGKFRNTKLAQQQAVKMENMLVGMT 448
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L II+K DV GS+E L +SL LST +VK+Q+++ AVG I+ESDINLAIASKA+
Sbjct: 449 AGEVKMLPIIVKADVQGSQEALAQSLLKLSTGEVKVQLVYAAVGAISESDINLAIASKAV 508
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ N +N+RY++IIY+ + E++ ++ ++ E++E LG AEIR
Sbjct: 509 VIGFNVRADAGARKLAENNGVNLRYYSIIYDAVDELRVAMSGMLAPEQREEALGTAEIRT 568
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI G++ R+++ R+LR ++ TGE+DS+KR KD+V+EVK GFEC
Sbjct: 569 VFVASKIGTVAGSYITSGMVHRNARFRLLRENVVVHTGEIDSIKRLKDDVREVKEGFEC 627
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 19/147 (12%)
Query: 914 LSDENIYILIKSAII---AHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERG 970
++ +N +L ++ ++ HVDHGKT+L+D++ R + I I + +E RG
Sbjct: 146 VAQQNAEVLPRAPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHI-GAYHVETPRG 204
Query: 971 ITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVT 1030
+ F +DTPGH F R D V+L++ A +G MPQT+
Sbjct: 205 MVSF---------------LDTPGHEAFTAMRARGARATDIVILVVAADDGVMPQTKEAI 249
Query: 1031 RKALKLGFKPIVVVNKIDRSNARPEWV 1057
+ A G +V + K D+ +A P+ V
Sbjct: 250 KHAKAAGVPIVVAITKADKPDANPDRV 276
>gi|340001447|ref|YP_004732331.1| GTP-binding protein [Salmonella bongori NCTC 12419]
gi|339514809|emb|CCC32579.1| GTP-binding protein [Salmonella bongori NCTC 12419]
Length = 607
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PIK++LE A+EFI+DDELVE+TP++IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVILVPPIKMSLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRRR 599
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|357418200|ref|YP_004931220.1| GTP-binding protein TypA [Pseudoxanthomonas spadix BD-a59]
gi|355335778|gb|AER57179.1| GTP-binding protein TypA [Pseudoxanthomonas spadix BD-a59]
Length = 615
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/606 (55%), Positives = 449/606 (74%), Gaps = 15/606 (2%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG- 984
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I +
Sbjct: 10 AIVAHVDHGKTTLVDQLLKQSGTLSERTVLADRVMDSNDQEKERGITILAKNTAITWEDK 69
Query: 985 -----TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFK
Sbjct: 70 RTGVKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFK 129
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVVVNK+DR ARPEWVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA R+G+
Sbjct: 130 PIVVVNKVDRPGARPEWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYAGLEDTVREGD 189
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PL+EAI+++ P + + + P Q++I L+Y++++G IGIGRI G ++ V +++
Sbjct: 190 MTPLYEAIMQHAPKPEVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGTLRKNMPVAVIDR 249
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+ K + K+ Q+ F GL+R+ + A +GDIV I+GI+E+ I TIC P LP L
Sbjct: 250 -EGKKRQGKVLQVLGFLGLERIEQDSAQAGDIVAISGIQELTISDTICALDTPEALPALT 308
Query: 1220 IDEPTLTINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
+DEPT+++ F VNNSP AG + GKF+T+RQ+K RL+ E +N+ L+V Q + D +
Sbjct: 309 VDEPTISMTFQVNNSPFAGNKDLSGGKFLTSRQLKERLERETVHNVALKVEQLEDADK-F 367
Query: 1276 EVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIM 1335
VSGRGELHL++LIENMRREGYEL+VSRP VI K ++G+L EP E L VD+EE++QG +M
Sbjct: 368 LVSGRGELHLSVLIENMRREGYELAVSRPEVIIKEIDGQLMEPIEQLVVDVEEVHQGGVM 427
Query: 1336 QKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFY 1395
+KL R G LKN+E + K RVRL+Y IP+RGLIGFQNEF TLT+G+GL+ HVF+ Y P
Sbjct: 428 EKLGMRKGQLKNMESDGKGRVRLDYEIPARGLIGFQNEFKTLTQGSGLLFHVFDHYGP-- 485
Query: 1396 NKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDL 1455
K + + KR NGV+I+ G AYSL LQ+RG+LF D VYEG +IGIHS+DNDL
Sbjct: 486 -KEQGAIAKRPNGVMIANAPGATPAYSLGPLQERGKLFAAEGDHVYEGQLIGIHSKDNDL 544
Query: 1456 LVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLK 1515
VN IK K LTN+R+SG D+AI L IK +LE A++FI+DDELVEITPK IRLRK+FL
Sbjct: 545 TVNAIKTKPLTNMRASGKDDAIALTPAIKFSLEQALDFIDDDELVEITPKEIRLRKKFLT 604
Query: 1516 ENERKK 1521
E++RK+
Sbjct: 605 ESDRKR 610
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + K + SE + + N ++ + +IT+
Sbjct: 9 IAIVAHVDHGKTTLVDQLLKQSGTLSERTVLADRVMDSNDQEKERGITILAKNTAITWED 68
Query: 121 -----------LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
+DTPGH F R + D V+++V A DG MPQTR A G
Sbjct: 69 KRTGVKNRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGF 128
Query: 170 PLIVAINKIDK 180
IV +NK+D+
Sbjct: 129 KPIVVVNKVDR 139
>gi|296105435|ref|YP_003615581.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059894|gb|ADF64632.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 607
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/598 (56%), Positives = 452/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAADMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSIRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|378765074|ref|YP_005193533.1| GTP-binding protein TypA [Pantoea ananatis LMG 5342]
gi|386077337|ref|YP_005990862.1| GTP-binding protein TypA [Pantoea ananatis PA13]
gi|354986518|gb|AER30642.1| GTP-binding protein TypA [Pantoea ananatis PA13]
gi|365184546|emb|CCF07496.1| GTP-binding protein TypA [Pantoea ananatis LMG 5342]
Length = 607
Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+I+ SAL+G A +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIFASALNGIAGLEHTDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + ++ PLQ+QI L+Y++YLG IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSPPQVEADAPLQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPQNVQALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ G EP+EN+ +DIEE +QG +MQ + R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREFEGRKQEPFENVTLDIEETHQGSVMQAMGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYDDI---RAGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PIK+TLE AIEFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPIKMTLEQAIEFIDDDELVEVTPQSVRIRKRHLTENDRKR 599
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|410625640|ref|ZP_11336416.1| GTP-binding protein TypA/BipA [Glaciecola mesophila KMM 241]
gi|410154850|dbj|GAC23185.1| GTP-binding protein TypA/BipA [Glaciecola mesophila KMM 241]
Length = 611
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTLESRGAAEERVMDSNDIEKERGITILAKNTAIRWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVLN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A+ ++ +M PLFE
Sbjct: 135 KIDKPGARPDWVIDQVFDLFDNLGATDDQLDFQVVYASALNGWASNDADKPSEDMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K+V + N P Q+QI L+Y+SY+G IG+GR+ G +K+ Q V I+ G D K
Sbjct: 195 TIVKHVKAPSGDINGPFQMQISQLDYNSYVGVIGVGRVTRGSVKTNQAVTIV-GADGKKR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V A +GDI+ +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 254 NGKMGQVLGYMGLDRTEVESASAGDIIAVTGLGELKISDTICDQNTVEALPPLSVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFCGKEGKYVTSRNILERLQDELIHNVALRVDETADPDK-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI + ++G+L EP+E + +D++E +QG IM+++ R G+L
Sbjct: 373 GILIENMRREGYELAVSRPEVILREVDGKLEEPFETVTIDVQEDHQGSIMEQIGLRKGEL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+R+++ IPSRGLIGFQ +F+T+T G+GL+ H F+ Y P ++G+R
Sbjct: 433 TNMSPDGKGRIRMDFIIPSRGLIGFQTDFMTMTSGSGLMYHSFDHYGPHKGG---NIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 490 KNGVLIANATGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P+ ++LE A+EFI++DELVE+TPK+IR+RK+ L EN+RK+
Sbjct: 550 TNVRASGTDEAQSLVPPVLLSLEQALEFIDNDELVEVTPKSIRIRKKLLTENDRKR 605
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLESRGAAEERVMDSNDIEKERGITILAKNTAIRWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVL 133
Query: 176 NKIDK 180
NKIDK
Sbjct: 134 NKIDK 138
>gi|386817104|ref|ZP_10104322.1| GTP-binding protein TypA [Thiothrix nivea DSM 5205]
gi|386421680|gb|EIJ35515.1| GTP-binding protein TypA [Thiothrix nivea DSM 5205]
Length = 614
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/607 (57%), Positives = 455/607 (74%), Gaps = 12/607 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL+QSGT + ++ R+MDSN +EKERGITI +KN ++ +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGERAEVSERMMDSNALEKERGITILAKNTALRWTNP 68
Query: 983 -NGT--RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
NG RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G K
Sbjct: 69 KNGVEYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAHGLK 128
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PI+VVNKIDR ARP WV+D F+LFD L AT+EQLDFPV+Y SAL+G+A G+
Sbjct: 129 PILVVNKIDRPGARPHWVMDQVFELFDNLGATDEQLDFPVVYASALNGFAGLEETVDSGD 188
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M LFE I+ VP + + P QLQ+ L+Y+SYLG IGIGRI G++K+ + ++
Sbjct: 189 MTALFETIIDSVPAPDVDVDAPFQLQVSQLDYNSYLGIIGIGRIKQGKVKTNTQIKAID- 247
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+ +I +I F GLDRV VNEA +GDI+ +G++E+ I T+CDP LP L+
Sbjct: 248 TEGNIRSGRILKILGFNGLDRVEVNEAQAGDIIAFSGMDELHISDTLCDPDNVVALPPLS 307
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFIT-TRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVS 1278
+DEPT+T+ F VN SP AG+E K T +R++ RL E+ +N+ LRV ++ +D ++VS
Sbjct: 308 VDEPTVTMTFQVNTSPFAGKEVKTGTSSRRLNERLKQELLHNVALRV-EDTNDPEKFKVS 366
Query: 1279 GRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKL 1338
GRGELHL ILIENMRREGYEL+VSRP VI + ++G EP+E++ +DIEE +QG +M+ L
Sbjct: 367 GRGELHLGILIENMRREGYELAVSRPEVIIREIDGVKMEPFESVTIDIEEQSQGKVMEAL 426
Query: 1339 NYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKS 1398
R +LK++ + K RVRLEY +PSRGLIGFQ +F+T+T GTGLI H FE YAP S
Sbjct: 427 GERKAELKDMAPDGKGRVRLEYIMPSRGLIGFQTDFMTMTSGTGLIYHTFENYAPVKPGS 486
Query: 1399 KYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVN 1458
+G+R NGVLI+ +GKA+AY+++ LQ+RGR+FI H + VYEGM+IGIHSRDNDL+VN
Sbjct: 487 ---IGQRHNGVLIANATGKALAYAIFNLQERGRMFIGHGEEVYEGMVIGIHSRDNDLVVN 543
Query: 1459 PIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENE 1518
P+K KQLTNIR++G+DE + L+ PI++TLE A+EFI+DDELVEITPK+IR+RKRFL E+E
Sbjct: 544 PLKAKQLTNIRAAGTDENLILVPPIRMTLEQAMEFIDDDELVEITPKSIRIRKRFLLEHE 603
Query: 1519 RKKKLHK 1525
RK+ K
Sbjct: 604 RKRASKK 610
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E +++ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGERAEVSERMMDSNALEKERGITILAKNTALRWTN 67
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 68 PKNGVEYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAHGL 127
Query: 170 PLIVAINKIDK 180
I+ +NKID+
Sbjct: 128 KPILVVNKIDR 138
>gi|319637700|ref|ZP_07992466.1| translation initiation factor IF-2 [Neisseria mucosa C102]
gi|317400855|gb|EFV81510.1| translation initiation factor IF-2 [Neisseria mucosa C102]
Length = 976
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 445/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 411 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGVEA 469
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 470 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 529
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 530 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 589
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 590 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGINIDALLEAVLLEAEVLELTAPVD 649
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK I EAGP
Sbjct: 650 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAINEAGP 709
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 710 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 769
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 770 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 829
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 830 IIGFNVRADASARKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 889
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 890 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 949
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 950 LMIKGYNEIM-EGDQLECFDI 969
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 483 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 529
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 530 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 586
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 587 IDKEAANPERI 597
>gi|16762424|ref|NP_458041.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|56415855|ref|YP_152930.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|168237624|ref|ZP_02662682.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168244244|ref|ZP_02669176.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168263098|ref|ZP_02685071.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|194443181|ref|YP_002043230.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194451908|ref|YP_002048011.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194736407|ref|YP_002116928.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197364785|ref|YP_002144422.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|198242119|ref|YP_002217929.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|200388210|ref|ZP_03214822.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204930278|ref|ZP_03221255.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205354409|ref|YP_002228210.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207859200|ref|YP_002245851.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213027497|ref|ZP_03341944.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
gi|213162860|ref|ZP_03348570.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213426416|ref|ZP_03359166.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213616219|ref|ZP_03372045.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213852016|ref|ZP_03381548.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
gi|289829354|ref|ZP_06546966.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|375003867|ref|ZP_09728204.1| GTP-binding protein TypA/BipA [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|375125290|ref|ZP_09770454.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378957254|ref|YP_005214741.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|378961771|ref|YP_005219257.1| GTP-binding protein TypA/BipA [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|386589365|ref|YP_006085765.1| GTP-binding protein TypA/BipA [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|416573291|ref|ZP_11767778.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|418787075|ref|ZP_13342880.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418793583|ref|ZP_13349310.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418800298|ref|ZP_13355960.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418807175|ref|ZP_13362739.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418811337|ref|ZP_13366868.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418818572|ref|ZP_13374042.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418821535|ref|ZP_13376959.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418827424|ref|ZP_13382572.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|418831385|ref|ZP_13386339.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418838360|ref|ZP_13393208.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418840876|ref|ZP_13395701.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418845764|ref|ZP_13400544.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418849375|ref|ZP_13404107.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418854762|ref|ZP_13409427.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418861278|ref|ZP_13415842.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418865831|ref|ZP_13420301.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|418870455|ref|ZP_13424872.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419728706|ref|ZP_14255670.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419733498|ref|ZP_14260395.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419738548|ref|ZP_14265309.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419743177|ref|ZP_14269843.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419749267|ref|ZP_14275751.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421359805|ref|ZP_15810093.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421362895|ref|ZP_15813146.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421365959|ref|ZP_15816167.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421373788|ref|ZP_15823927.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421376345|ref|ZP_15826453.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421380916|ref|ZP_15830977.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421383945|ref|ZP_15833975.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421389804|ref|ZP_15839786.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421395815|ref|ZP_15845748.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421400276|ref|ZP_15850163.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421402164|ref|ZP_15852025.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421409354|ref|ZP_15859145.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421410908|ref|ZP_15860679.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421417005|ref|ZP_15866723.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421419940|ref|ZP_15869623.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421428215|ref|ZP_15877830.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421431891|ref|ZP_15881469.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421436464|ref|ZP_15885993.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421440972|ref|ZP_15890443.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421445554|ref|ZP_15894976.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421448644|ref|ZP_15898036.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|421569872|ref|ZP_16015570.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421575605|ref|ZP_16021217.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421578851|ref|ZP_16024423.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421583558|ref|ZP_16029079.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|436618506|ref|ZP_20514456.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436699303|ref|ZP_20518308.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436796214|ref|ZP_20522776.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436806366|ref|ZP_20526611.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436814315|ref|ZP_20532257.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436830319|ref|ZP_20535217.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436848514|ref|ZP_20540105.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436855083|ref|ZP_20544448.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436862061|ref|ZP_20548914.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436872190|ref|ZP_20555254.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436881562|ref|ZP_20560957.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436885633|ref|ZP_20562581.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436892886|ref|ZP_20566983.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436900283|ref|ZP_20571337.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436910846|ref|ZP_20576936.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436920819|ref|ZP_20583306.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436923056|ref|ZP_20584957.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436937422|ref|ZP_20592596.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436939914|ref|ZP_20594074.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436950213|ref|ZP_20599743.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436957857|ref|ZP_20603000.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436973161|ref|ZP_20610538.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436980232|ref|ZP_20613324.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436990619|ref|ZP_20617022.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437011321|ref|ZP_20624497.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437023378|ref|ZP_20629055.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437031484|ref|ZP_20631468.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437046177|ref|ZP_20638129.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437047676|ref|ZP_20639039.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437055131|ref|ZP_20643365.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437063728|ref|ZP_20648093.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437074199|ref|ZP_20653610.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437086331|ref|ZP_20660449.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437090471|ref|ZP_20662849.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437107147|ref|ZP_20667395.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437119604|ref|ZP_20670923.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437128219|ref|ZP_20675059.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437140226|ref|ZP_20682290.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437145004|ref|ZP_20685269.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437152348|ref|ZP_20689999.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437158710|ref|ZP_20693481.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437171872|ref|ZP_20700863.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437176213|ref|ZP_20703356.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437182402|ref|ZP_20707016.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437245585|ref|ZP_20714715.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437264004|ref|ZP_20719645.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437271822|ref|ZP_20724011.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437274925|ref|ZP_20725496.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437289581|ref|ZP_20731103.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437310637|ref|ZP_20735764.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437330233|ref|ZP_20741520.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437339749|ref|ZP_20744292.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437360274|ref|ZP_20748201.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437414840|ref|ZP_20753752.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437436185|ref|ZP_20756710.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437458755|ref|ZP_20760806.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437480488|ref|ZP_20768327.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437487840|ref|ZP_20770081.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437502630|ref|ZP_20774622.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437526671|ref|ZP_20779852.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437562322|ref|ZP_20786553.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437577516|ref|ZP_20790979.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437587077|ref|ZP_20793488.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437602777|ref|ZP_20798676.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437615022|ref|ZP_20802005.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437634767|ref|ZP_20807015.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437656454|ref|ZP_20810775.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437686330|ref|ZP_20819356.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437694022|ref|ZP_20821635.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437702954|ref|ZP_20824369.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437727472|ref|ZP_20830268.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437756177|ref|ZP_20834366.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437809812|ref|ZP_20840805.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437916690|ref|ZP_20850529.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438083019|ref|ZP_20858091.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438098732|ref|ZP_20862954.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438108926|ref|ZP_20867191.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438141522|ref|ZP_20875070.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445137677|ref|ZP_21383609.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445140755|ref|ZP_21385064.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445156907|ref|ZP_21392863.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445169577|ref|ZP_21395303.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445186561|ref|ZP_21399294.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445229107|ref|ZP_21404915.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445251922|ref|ZP_21408940.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445331870|ref|ZP_21414307.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445343984|ref|ZP_21417355.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445366489|ref|ZP_21425333.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|452122218|ref|YP_007472466.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|11024578|emb|CAC14268.1| BipA GTPase [Salmonella enterica]
gi|16504728|emb|CAD09618.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|56130112|gb|AAV79618.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|194401844|gb|ACF62066.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194410212|gb|ACF70431.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194711909|gb|ACF91130.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197096262|emb|CAR61860.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197289403|gb|EDY28768.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197936635|gb|ACH73968.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199605308|gb|EDZ03853.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204320682|gb|EDZ05884.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205274190|emb|CAR39207.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205336867|gb|EDZ23631.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205348302|gb|EDZ34933.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|206711003|emb|CAR35371.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|326629540|gb|EGE35883.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|353073942|gb|EHB39705.1| GTP-binding protein TypA/BipA [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|357207865|gb|AET55911.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|363571991|gb|EHL55887.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|374355643|gb|AEZ47404.1| GTP-binding protein TypA/BipA [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|381298827|gb|EIC39902.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381299939|gb|EIC41006.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381302081|gb|EIC43128.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381311669|gb|EIC52481.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|381312264|gb|EIC53068.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|383796409|gb|AFH43491.1| GTP-binding protein TypA/BipA [Salmonella enterica subsp. enterica
serovar Heidelberg str. B182]
gi|392761638|gb|EJA18458.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392764077|gb|EJA20881.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392767247|gb|EJA24018.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392779100|gb|EJA35770.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392780163|gb|EJA36819.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392784755|gb|EJA41337.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392790111|gb|EJA46612.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392796396|gb|EJA52733.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392799484|gb|EJA55741.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392799721|gb|EJA55974.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392810016|gb|EJA66043.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392812377|gb|EJA68367.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392821222|gb|EJA77049.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392823299|gb|EJA79096.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392824921|gb|EJA80684.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392826906|gb|EJA82625.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392830543|gb|EJA86191.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|395984309|gb|EJH93498.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395989020|gb|EJH98156.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395992492|gb|EJI01609.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395996114|gb|EJI05167.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396002560|gb|EJI11551.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396002704|gb|EJI11694.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396011738|gb|EJI20645.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015734|gb|EJI24604.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396020932|gb|EJI29770.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396023884|gb|EJI32675.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396025144|gb|EJI33925.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396032832|gb|EJI41549.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396043641|gb|EJI52240.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396047180|gb|EJI55757.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396047317|gb|EJI55891.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396050042|gb|EJI58579.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396051714|gb|EJI60230.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396053054|gb|EJI61555.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396064574|gb|EJI72958.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396065137|gb|EJI73515.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396072591|gb|EJI80900.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|402522055|gb|EJW29386.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402523793|gb|EJW31104.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402526152|gb|EJW33430.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402532048|gb|EJW39248.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|434939674|gb|ELL46453.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434961732|gb|ELL54998.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434965678|gb|ELL58601.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434969673|gb|ELL62364.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434974468|gb|ELL66836.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434983909|gb|ELL75683.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434989348|gb|ELL80900.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434993403|gb|ELL84827.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434997932|gb|ELL89170.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434999489|gb|ELL90664.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435000613|gb|ELL91757.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435004078|gb|ELL95075.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435012958|gb|ELM03632.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435020091|gb|ELM10511.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435022235|gb|ELM12567.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435027343|gb|ELM17466.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435027604|gb|ELM17725.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435036058|gb|ELM25896.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435042560|gb|ELM32279.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435047220|gb|ELM36815.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435052808|gb|ELM42294.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435054751|gb|ELM44179.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435056408|gb|ELM45798.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435065047|gb|ELM54154.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435067748|gb|ELM56787.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435070150|gb|ELM59147.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435075340|gb|ELM64161.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435078933|gb|ELM67652.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435080808|gb|ELM69475.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435099227|gb|ELM87444.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435100303|gb|ELM88486.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435101846|gb|ELM89978.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435103754|gb|ELM91830.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435107143|gb|ELM95139.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435114475|gb|ELN02280.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435120939|gb|ELN08502.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435128921|gb|ELN16246.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435129246|gb|ELN16552.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435130284|gb|ELN17540.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435137862|gb|ELN24896.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435142835|gb|ELN29715.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435145527|gb|ELN32338.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435151002|gb|ELN37664.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435155990|gb|ELN42493.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435160385|gb|ELN46664.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435164451|gb|ELN50533.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435169606|gb|ELN55377.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435174032|gb|ELN59491.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435175517|gb|ELN60934.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435182336|gb|ELN67357.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435184688|gb|ELN69611.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435189967|gb|ELN74580.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435195306|gb|ELN79709.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435202734|gb|ELN86559.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435210797|gb|ELN94032.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435213589|gb|ELN96473.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435218305|gb|ELO00707.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435222726|gb|ELO04818.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435232245|gb|ELO13352.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435237417|gb|ELO18108.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435237599|gb|ELO18266.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435243064|gb|ELO23363.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435247494|gb|ELO27426.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435259118|gb|ELO38350.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435259421|gb|ELO38645.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435263312|gb|ELO42378.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435266458|gb|ELO45215.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435271928|gb|ELO50364.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435278929|gb|ELO56753.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435281267|gb|ELO58943.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435291258|gb|ELO68122.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435294115|gb|ELO70764.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435299147|gb|ELO75318.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435310219|gb|ELO84750.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435315069|gb|ELO88365.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435320306|gb|ELO92966.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435326358|gb|ELO98186.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435333001|gb|ELP03888.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|444844179|gb|ELX69423.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444846967|gb|ELX72119.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444852034|gb|ELX77117.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444863194|gb|ELX88022.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444865772|gb|ELX90535.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444869438|gb|ELX94021.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444877329|gb|ELY01480.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444880629|gb|ELY04697.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444882611|gb|ELY06552.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444889592|gb|ELY13014.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|451911222|gb|AGF83028.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 607
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PIK++LE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVILVPPIKMSLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|386288343|ref|ZP_10065486.1| GTP-binding protein TypA/BipA [gamma proteobacterium BDW918]
gi|385278641|gb|EIF42610.1| GTP-binding protein TypA/BipA [gamma proteobacterium BDW918]
Length = 602
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 457/597 (76%), Gaps = 7/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTF-RKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL QSGT R+NQ+ + RIMDSN+ EKERGITI +KN +IE+NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLDRRNQD-SERIMDSNDQEKERGITILAKNTAIEWNG 67
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA + G PIVVV
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFEQGLNPIVVV 127
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLFD+L AT+EQLDFP+++ SA++G A + +M PLF
Sbjct: 128 NKVDRPGARPDWVVDQVFDLFDRLGATDEQLDFPIMFASAINGVAGLDFNDLAEDMTPLF 187
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+ I+ VP + +++ PLQ+QI +L+Y+SY+G IG+GRI G +K+ D +++ G D K
Sbjct: 188 QMIVDKVPTPEVDADGPLQMQISALDYNSYVGVIGVGRITRGTMKA-NDQLVVVGADGKS 246
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K K+ + + GL+RV V E +G+IV +TGIE + I T+C P P LP L++DEPT
Sbjct: 247 RKCKLLTVMGYYGLERVEVPEGKAGEIVCVTGIEGLNISDTLCAPGHPEALPPLSVDEPT 306
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VN+SP AG+EGKF+T+R I++RLD E+ +N+ LRV Q + D ++VSGRGELH
Sbjct: 307 VSMTFQVNDSPFAGKEGKFVTSRNIRDRLDQELIHNVALRVEQGETPDK-FKVSGRGELH 365
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIE MRREG+E+ VSRP V+ K ++G + EP+E++ +D+EE +QG +M++L R +
Sbjct: 366 LSVLIETMRREGFEMGVSRPEVVQKIVDGVVQEPFEHVVIDVEEQHQGSVMEELGLRKAE 425
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+ N+E + K RV+LE+ P+RGLIGF+ +F+T+T G+G+++ VF+ Y +L
Sbjct: 426 MTNMEPDGKGRVKLEFIAPARGLIGFRGQFLTMTSGSGIMTTVFDHYGEVKGG---ELAG 482
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGV++S GK +AY L+ LQDRGRLF+ H VYEG IIGIH+R+NDL+VNP + KQ
Sbjct: 483 RQNGVMVSMVGGKTLAYGLFNLQDRGRLFMGHAAEVYEGQIIGIHNRNNDLVVNPTRAKQ 542
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG+D+A+ L IK TLE A+EFI DDELVE+TPK+IRLRK+ LKENERK+
Sbjct: 543 LTNVRASGTDDALTLSPHIKHTLEQALEFIEDDELVEVTPKSIRLRKKLLKENERKR 599
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 104/247 (42%), Gaps = 40/247 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + ++ I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLDRRNQDSERIMDSNDQEKERGITILAKNTAIEWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFEQGLNPIVVV 127
Query: 176 NKIDKLDINLDRIKQDLISEQVIP--EEYGGAS-----PFISISAKTGVG---INKLLEN 225
NK+D+ + D + +QV + G P + SA GV N L E+
Sbjct: 128 NKVDR-----PGARPDWVVDQVFDLFDRLGATDEQLDFPIMFASAINGVAGLDFNDLAED 182
Query: 226 ISLQAEILELKAPVTTP---AKGVIIE--SRLDKGK--GPVATVLIQSGTLRCSDIVVAG 278
++ +++ K P TP A G + S LD G + I GT++ +D +V
Sbjct: 183 MTPLFQMIVDKVP--TPEVDADGPLQMQISALDYNSYVGVIGVGRITRGTMKANDQLVVV 240
Query: 279 ASYGRIR 285
+ G+ R
Sbjct: 241 GADGKSR 247
>gi|352081420|ref|ZP_08952298.1| GTP-binding protein TypA [Rhodanobacter sp. 2APBS1]
gi|389797428|ref|ZP_10200470.1| GTP-binding protein TypA/BipA [Rhodanobacter sp. 116-2]
gi|351683461|gb|EHA66545.1| GTP-binding protein TypA [Rhodanobacter sp. 2APBS1]
gi|388447391|gb|EIM03399.1| GTP-binding protein TypA/BipA [Rhodanobacter sp. 116-2]
Length = 608
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/600 (56%), Positives = 447/600 (74%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARPEWVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA+ + R+G+M PL+E
Sbjct: 130 KVDRPGARPEWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYASLDDSVREGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q++I L+Y++++G IGIGRI G +K V +++ K
Sbjct: 190 AIMRHVSKPDVDPDGPFQMRISQLDYNNFVGVIGIGRIQRGTLKKNMPVAVID-RHGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ A +GDIV I+GI ++ I TIC P LP L +DEPT+
Sbjct: 249 QGKVLQVLGFMGLERIEQETAEAGDIVAISGIADLTISDTICALDTPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+K+RL+ E +N+ L+V Q D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLKDRLEREQVHNVALKVEQGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+ EP E L VD+EE +QG +M++L R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGQKMEPIEQLVVDVEETHQGPVMERLGMR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRLEY IP+RGLIGFQN+F TLT+G+GL+ HVF+ Y P K +
Sbjct: 428 KGQLKNMEPDGKGRVRLEYMIPARGLIGFQNQFKTLTQGSGLLFHVFDHYGP---KEEGQ 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+I+ G AYSL LQDRG+LF D VYEG ++GIH++DNDL VN IK
Sbjct: 485 IAKRLNGVMIANAGGTTPAYSLGPLQDRGKLFAAEGDNVYEGQLVGIHAKDNDLTVNVIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AIQL IK TLE A++FI+DDELVE+TPK IRLRK+ L EN+RK+
Sbjct: 545 PKPLTNMRASGKDDAIQLTPAIKFTLEQALDFIDDDELVEVTPKEIRLRKKHLTENDRKR 604
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVTNHG 116
+ I+ HVDHGKT+L+D + K + SE + + + N +T G
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLSERTVLAERVMDSNDQEKERGITILAKNTAITWQG 68
Query: 117 S-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ I +DTPGH F R + D V+++V A DG MPQTR A G IV I
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|161505492|ref|YP_001572604.1| GTP-binding protein [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|160866839|gb|ABX23462.1| hypothetical protein SARI_03651 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-]
Length = 607
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ N A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSNIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PIK++LE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVILVPPIKMSLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|62182470|ref|YP_218887.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161617132|ref|YP_001591097.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|167551511|ref|ZP_02345266.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|168232933|ref|ZP_02657991.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168467339|ref|ZP_02701176.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168821654|ref|ZP_02833654.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194469766|ref|ZP_03075750.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197251595|ref|YP_002148927.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|238912152|ref|ZP_04655989.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|375116819|ref|ZP_09761989.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|409247680|ref|YP_006888375.1| GTP-binding protein lepA [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|416427178|ref|ZP_11693401.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416432236|ref|ZP_11696070.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416435824|ref|ZP_11698037.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416448643|ref|ZP_11706470.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416452818|ref|ZP_11709249.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416461620|ref|ZP_11715409.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416464272|ref|ZP_11716292.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416473022|ref|ZP_11719639.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416488274|ref|ZP_11725741.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416502058|ref|ZP_11732545.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416505708|ref|ZP_11734083.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416517840|ref|ZP_11739638.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416529108|ref|ZP_11744135.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416537551|ref|ZP_11748991.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416547651|ref|ZP_11754673.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416548403|ref|ZP_11754797.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416560552|ref|ZP_11761271.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416580257|ref|ZP_11771740.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416587344|ref|ZP_11775998.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416592837|ref|ZP_11779554.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416600746|ref|ZP_11784637.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416605996|ref|ZP_11787398.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416616313|ref|ZP_11793994.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416622861|ref|ZP_11797162.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416632993|ref|ZP_11801689.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416645250|ref|ZP_11807361.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416649427|ref|ZP_11809844.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416659019|ref|ZP_11814614.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416664933|ref|ZP_11816385.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416694477|ref|ZP_11827188.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416704790|ref|ZP_11830481.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416710770|ref|ZP_11834747.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416718003|ref|ZP_11840192.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416723821|ref|ZP_11844446.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416729377|ref|ZP_11847959.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416742231|ref|ZP_11855700.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416743743|ref|ZP_11856317.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416758981|ref|ZP_11863949.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416764142|ref|ZP_11867799.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416770001|ref|ZP_11871404.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418484588|ref|ZP_13053584.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418491986|ref|ZP_13058488.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418494947|ref|ZP_13061393.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418499567|ref|ZP_13065972.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418505910|ref|ZP_13072252.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418506977|ref|ZP_13073304.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418514106|ref|ZP_13080320.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418526412|ref|ZP_13092389.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|418764077|ref|ZP_13320181.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418764416|ref|ZP_13320514.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418768925|ref|ZP_13324963.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418774553|ref|ZP_13330520.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418779823|ref|ZP_13335720.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418782619|ref|ZP_13338481.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418800417|ref|ZP_13356070.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|419786607|ref|ZP_14312331.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419792974|ref|ZP_14318603.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421885445|ref|ZP_16316641.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|437833706|ref|ZP_20844787.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|440763587|ref|ZP_20942625.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440766220|ref|ZP_20945217.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440771518|ref|ZP_20950433.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|62130103|gb|AAX67806.1| GTP-binding elongation factor family protein [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161366496|gb|ABX70264.1| hypothetical protein SPAB_04972 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|194456130|gb|EDX44969.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|195630129|gb|EDX48769.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197215298|gb|ACH52695.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|205323663|gb|EDZ11502.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205332778|gb|EDZ19542.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205341844|gb|EDZ28608.1| GTP-binding protein TypA [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320088414|emb|CBY98173.1| GTP-binding protein lepA [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|322613078|gb|EFY10028.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619149|gb|EFY16032.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322626015|gb|EFY22827.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626526|gb|EFY23332.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632362|gb|EFY29110.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635157|gb|EFY31878.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642765|gb|EFY39354.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647930|gb|EFY44402.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650680|gb|EFY47081.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322652863|gb|EFY49200.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657178|gb|EFY53458.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662335|gb|EFY58550.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666870|gb|EFY63046.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672140|gb|EFY68255.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675862|gb|EFY71934.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681723|gb|EFY77749.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684083|gb|EFY80092.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|322716965|gb|EFZ08536.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|323193355|gb|EFZ78570.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197712|gb|EFZ82845.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323200715|gb|EFZ85786.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323211483|gb|EFZ96324.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218472|gb|EGA03180.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323226022|gb|EGA10241.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231702|gb|EGA15814.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236050|gb|EGA20128.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239529|gb|EGA23578.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243878|gb|EGA27889.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249240|gb|EGA33157.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323250517|gb|EGA34400.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323258971|gb|EGA42623.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323260216|gb|EGA43839.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265335|gb|EGA48832.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270557|gb|EGA54003.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|363552803|gb|EHL37082.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363555973|gb|EHL40193.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363559643|gb|EHL43800.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363563250|gb|EHL47329.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363570990|gb|EHL54908.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363574657|gb|EHL58520.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|366058615|gb|EHN22902.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366058760|gb|EHN23040.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366060609|gb|EHN24871.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366066597|gb|EHN30757.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366070682|gb|EHN34788.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366080179|gb|EHN44153.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366081938|gb|EHN45876.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366828765|gb|EHN55645.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372205744|gb|EHP19251.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|379985052|emb|CCF88914.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|392617998|gb|EIX00412.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392621590|gb|EIX03944.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392730986|gb|EIZ88221.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392741091|gb|EIZ98201.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392743053|gb|EJA00130.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392750578|gb|EJA07539.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392751467|gb|EJA08417.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392759811|gb|EJA16654.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392783791|gb|EJA40401.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|435302013|gb|ELO78005.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|436419373|gb|ELP17250.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|436421093|gb|ELP18943.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436423299|gb|ELP21113.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
Length = 607
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIIDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PIK++LE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVILVPPIKMSLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|418259213|ref|ZP_12882215.1| GTP-binding protein TypA/BipA [Shigella flexneri 6603-63]
gi|397894865|gb|EJL11305.1| GTP-binding protein TypA/BipA [Shigella flexneri 6603-63]
Length = 607
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFPV+Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPVVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|213647404|ref|ZP_03377457.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
Length = 607
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++L+ENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLVENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PIK++LE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVILVPPIKMSLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|89094918|ref|ZP_01167849.1| GTP-binding elongation factor family protein [Neptuniibacter
caesariensis]
gi|89080784|gb|EAR60025.1| GTP-binding elongation factor family protein [Neptuniibacter
caesariensis]
Length = 603
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/600 (55%), Positives = 453/600 (75%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + RIMDSN+ EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGRRDEGTERIMDSNDQEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD V LL+DAV+GPMPQTRFVT+KA G +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDCVCLLVDAVDGPMPQTRFVTQKAFDQGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + +M PLFE
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDSLGATDEQLDFPIVYASALNGIAGLDPEEMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A++++V K + + PLQ+Q+ +L+Y+SYLG IG+GR+ G I + V +++ +
Sbjct: 189 AVVEHVEPPKVDVDGPLQMQVSALDYNSYLGVIGVGRVTRGTINTNTQVKVID-REGAVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ +I + GL+RV V A +GDI+ +TGI+ + I T+CDP LP L++DEPT+
Sbjct: 248 SGRVLKIMGYHGLERVDVESATAGDIICVTGIDALNISDTLCDPDNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG++GKF+T+R IK RLD E+ +N+ LRV + + + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGQDGKFVTSRNIKERLDRELIHNVALRVEEGETPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL VSRP VI K ++GE+ EPYE + +D+E+ +QG ++++L R GD+
Sbjct: 367 SVLIETMRREGFELGVSRPEVIQKEIDGEIQEPYELVMIDVEDEHQGSVIEELGKRKGDM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E++ K RVRL + IPSRGLIGF++ F+T+T GTG+++ +F+ Y P + D+ R
Sbjct: 427 TNMEVDGKGRVRLTFMIPSRGLIGFRSLFLTMTSGTGIMTSIFDHYGPV---KEGDVVSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ Y+LW LQDRGRL I+ N VYEGMI+GIHSR+NDL VNP K KQL
Sbjct: 484 INGVLVSMVTGKALGYALWNLQDRGRLAIDPNVEVYEGMILGIHSRNNDLAVNPTKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SGSDE IQL P++ TLE A++FI DDELVE+TP IRLRK+ LKENERK+ +K
Sbjct: 544 TNVRASGSDENIQLTPPVRFTLEQALDFIEDDELVEVTPNFIRLRKKLLKENERKRAKNK 603
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + T+ I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGRRDEGTERIMDSNDQEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDCVCLLVDAVDGPMPQTRFVTQKAFDQGLRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|225075067|ref|ZP_03718266.1| hypothetical protein NEIFLAOT_00066 [Neisseria flavescens
NRL30031/H210]
gi|224953551|gb|EEG34760.1| hypothetical protein NEIFLAOT_00066 [Neisseria flavescens
NRL30031/H210]
Length = 956
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 445/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 391 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGVEA 449
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 450 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 509
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 510 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 569
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 570 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 629
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK I EAGP
Sbjct: 630 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAINEAGP 689
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 690 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 749
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 750 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 809
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 810 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 869
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 870 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 929
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 930 LMLKGYNEIMEG-DQLECFDI 949
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 463 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 509
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 510 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 566
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 567 IDKEAANPERI 577
>gi|418040237|ref|ZP_12678484.1| GTP-binding protein [Escherichia coli W26]
gi|383476829|gb|EID68761.1| GTP-binding protein [Escherichia coli W26]
Length = 607
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDMAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|420382698|ref|ZP_14882129.1| GTP-binding protein TypA/BipA [Shigella dysenteriae 225-75]
gi|391298085|gb|EIQ56106.1| GTP-binding protein TypA/BipA [Shigella dysenteriae 225-75]
Length = 607
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y+SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYSSALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|241760300|ref|ZP_04758395.1| translation initiation factor IF-2 [Neisseria flavescens SK114]
gi|241319178|gb|EER55656.1| translation initiation factor IF-2 [Neisseria flavescens SK114]
Length = 964
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 444/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 399 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGVEA 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 458 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 517
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 518 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 577
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 578 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 637
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK I EAGP
Sbjct: 638 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAINEAGP 697
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 698 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 757
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 758 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 817
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 818 IIGFNVRADASARKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 877
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 878 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 937
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 938 LMIKGYNEIMEG-DQLECFDI 957
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 471 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 517
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 518 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 574
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 575 IDKEAANPERI 585
>gi|423142488|ref|ZP_17130126.1| GTP-binding protein TypA/BipA [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|379049701|gb|EHY67595.1| GTP-binding protein TypA/BipA [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
Length = 607
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PIK++LE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVILVPPIKMSLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|374704821|ref|ZP_09711691.1| GTP-binding protein TypA [Pseudomonas sp. S9]
Length = 603
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + + N R+MDSN+ EKERGITI +KN +++++
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWHDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVV+N
Sbjct: 69 DINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD L ATEEQLDFP++Y SAL+G A + NM PLF+
Sbjct: 129 KIDRPGARPDWVVDQIFDLFDNLGATEEQLDFPIVYCSALNGIAGLEHDKLEENMDPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+S+LG IGIGRI G++K+ V + G D K
Sbjct: 189 AIIDHVPAPAVDVDGPFQMQISQLDYNSFLGVIGIGRIARGKVKTNTPVTAI-GTDGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV VNEA +GDIV ++G++E+ I T+CDP+ L L +DEPT+
Sbjct: 248 NGRILKIMGHSGLQRVEVNEAQAGDIVCVSGMDELFISDTLCDPTNVEALEPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R+IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRKIKERLDKELLYNVALRVEEGDSADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL+V RP VI + ++G +EP+EN+ +D+EE +QG +M+++ R GDL
Sbjct: 367 SVLIETMRREGFELAVGRPEVIIRMVDGVKHEPFENVTIDLEEQHQGPMMEQMGNRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+N+F+TLT G+G+++ +F Y P + D+G R
Sbjct: 427 TNMVPDGKGRVRLEYTIPARGLIGFRNQFLTLTSGSGILTSIFSHYGPMKSG---DMGGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVL+S +GKA+ YSL LQ RG+LF+ H D VYEGM++GI+SRDNDL+VNP K K+L
Sbjct: 484 IQGVLVSSATGKALTYSLETLQARGKLFLGHGDDVYEGMLVGINSRDNDLVVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
N+R+SG DE I L+ PI+ TLE A+EFI DDEL EITPK+IRLRK+FL E +RK+
Sbjct: 544 DNMRASGKDETIALVPPIRYTLEQALEFIEDDELAEITPKSIRLRKKFLLETDRKR 599
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 81/191 (42%), Gaps = 23/191 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWHD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YDINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLIS--EQVIPEEYGGASPFISISAKTGVG---INKLLENIS--L 228
NKID+ D + + + + E P + SA G+ +KL EN+
Sbjct: 128 NKIDRPGARPDWVVDQIFDLFDNLGATEEQLDFPIVYCSALNGIAGLEHDKLEENMDPLF 187
Query: 229 QAEILELKAPV 239
QA I + AP
Sbjct: 188 QAIIDHVPAPA 198
>gi|261379744|ref|ZP_05984317.1| translation initiation factor IF-2 [Neisseria subflava NJ9703]
gi|284797422|gb|EFC52769.1| translation initiation factor IF-2 [Neisseria subflava NJ9703]
Length = 964
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 444/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 399 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGVEA 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 458 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 517
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 518 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 577
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 578 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 637
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK I EAGP
Sbjct: 638 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAINEAGP 697
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 698 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 757
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 758 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 817
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 818 IIGFNVRADASARKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 877
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 878 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 937
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 938 LMLKGYNEIMEG-DQLECFDI 957
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 471 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 517
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 518 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 574
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 575 IDKEAANPERI 585
>gi|34496917|ref|NP_901132.1| translation initiation factor IF-2 [Chromobacterium violaceum ATCC
12472]
gi|39931211|sp|Q7NY13.1|IF2_CHRVO RecName: Full=Translation initiation factor IF-2
gi|34102773|gb|AAQ59137.1| translation initiation factor IF-2 [Chromobacterium violaceum ATCC
12472]
Length = 964
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/561 (59%), Positives = 445/561 (79%), Gaps = 1/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+ VIK LMK+G MVTINQVLDQETA+I+VEEMGH+ A++ +DPE++L +
Sbjct: 398 MAVKAVEVIKTLMKMGMMVTINQVLDQETALIVVEEMGHIGKAAQADDPEAYLDVTDGET 457
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ R+P+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ITF
Sbjct: 458 VEVVEQPRSPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGMITF 517
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT EAI HAK + VP++VA+NKIDK
Sbjct: 518 LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIHHAKAAKVPMVVAVNKIDK 577
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N++RI+Q+L++ +V+PE++GG + F+ +SAK G+ I+ LLE I LQAE+LELKAPV
Sbjct: 578 QGANVERIRQELVAHEVVPEDWGGDTQFVEVSAKMGLNIDALLEAILLQAEVLELKAPVD 637
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+ AKG+I+E+RLDKG+GPVAT+L+QSGTL+ D+V+AG ++GR+R+M++ENGK I AGP
Sbjct: 638 SLAKGIIVEARLDKGRGPVATLLVQSGTLKKGDVVLAGTAFGRVRAMMDENGKAIDSAGP 697
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
+IPVEI GL+ VP +GE+ + +EKKAREI LFR GKFRDV+L+KQ+ K ENMF +
Sbjct: 698 AIPVEILGLSDVPQAGEDAMALADEKKAREIALFRAGKFRDVRLAKQQAAKLENMFAQMA 757
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V+ L IIIK DV GS E L SL+ LST++V++ ++H+ VG I+ESD+NLAIASKAI
Sbjct: 758 EGEVQTLSIIIKADVQGSYEALAGSLQKLSTEEVRVAILHSGVGGISESDVNLAIASKAI 817
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN RADA+ RKLA+ ++IRY+NIIY+ + E+K+ ++ ++ EKKE +LG EIRQ
Sbjct: 818 VIGFNTRADAAARKLAENEGVDIRYYNIIYDAVDEVKAALSGMLAPEKKEQILGTVEIRQ 877
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+I+R + IR++RN +I TGEL+SLKRFKD+VKEVK G+EC
Sbjct: 878 VITVSKVGNIAGCMVTDGMIKRSASIRLIRNHVVIHTGELESLKRFKDDVKEVKQGYECG 937
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N IQ + ++ AF+I
Sbjct: 938 LMLKNFNDIQ-EGDQLEAFEI 957
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 471 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGMITF------------ 517
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A +V VNK
Sbjct: 518 ---LDTPGHEAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIHHAKAAKVPMVVAVNK 574
Query: 1047 IDRSNA 1052
ID+ A
Sbjct: 575 IDKQGA 580
>gi|82546215|ref|YP_410162.1| GTP-binding protein [Shigella boydii Sb227]
gi|187732985|ref|YP_001882569.1| GTP-binding protein [Shigella boydii CDC 3083-94]
gi|416298154|ref|ZP_11651871.1| GTP-binding protein TypA/BipA [Shigella flexneri CDC 796-83]
gi|417684638|ref|ZP_12333975.1| GTP-binding protein TypA/BipA [Shigella boydii 3594-74]
gi|420355456|ref|ZP_14856520.1| GTP-binding protein TypA/BipA [Shigella boydii 4444-74]
gi|421684772|ref|ZP_16124554.1| GTP-binding protein TypA/BipA [Shigella flexneri 1485-80]
gi|81247626|gb|ABB68334.1| putative GTP-binding factor [Shigella boydii Sb227]
gi|187429977|gb|ACD09251.1| GTP-binding protein TypA [Shigella boydii CDC 3083-94]
gi|320185498|gb|EFW60266.1| GTP-binding protein TypA/BipA [Shigella flexneri CDC 796-83]
gi|332088566|gb|EGI93680.1| GTP-binding protein TypA/BipA [Shigella boydii 3594-74]
gi|391272360|gb|EIQ31214.1| GTP-binding protein TypA/BipA [Shigella boydii 4444-74]
gi|404335834|gb|EJZ62302.1| GTP-binding protein TypA/BipA [Shigella flexneri 1485-80]
Length = 607
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|433002790|ref|ZP_20191297.1| GTP-binding protein TypA/BipA [Escherichia coli KTE227]
gi|433156081|ref|ZP_20341002.1| GTP-binding protein TypA/BipA [Escherichia coli KTE176]
gi|431521370|gb|ELH98616.1| GTP-binding protein TypA/BipA [Escherichia coli KTE227]
gi|431669360|gb|ELJ35784.1| GTP-binding protein TypA/BipA [Escherichia coli KTE176]
Length = 607
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|194438276|ref|ZP_03070367.1| GTP-binding protein TypA [Escherichia coli 101-1]
gi|422793711|ref|ZP_16846405.1| GTP-binding protein TypA/BipA [Escherichia coli TA007]
gi|194422713|gb|EDX38709.1| GTP-binding protein TypA [Escherichia coli 101-1]
gi|323969737|gb|EGB65020.1| GTP-binding protein TypA/BipA [Escherichia coli TA007]
Length = 607
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|432367340|ref|ZP_19610451.1| GTP-binding protein TypA/BipA [Escherichia coli KTE10]
gi|430890575|gb|ELC13204.1| GTP-binding protein TypA/BipA [Escherichia coli KTE10]
Length = 607
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIIDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|401677314|ref|ZP_10809291.1| GTP-binding protein [Enterobacter sp. SST3]
gi|400215505|gb|EJO46414.1| GTP-binding protein [Enterobacter sp. SST3]
Length = 607
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/598 (56%), Positives = 452/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSIRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|440233096|ref|YP_007346889.1| GTP-binding protein TypA/BipA [Serratia marcescens FGI94]
gi|440054801|gb|AGB84704.1| GTP-binding protein TypA/BipA [Serratia marcescens FGI94]
Length = 607
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERAEAAERVMDSNDLEKERGITILAKNTAINWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGTDHTDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + + + PLQ+QI L+Y++YLG IGIGRI G++K Q V +++ + K
Sbjct: 189 AIVDHVSAPEVDLDGPLQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTVIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP+ LP L++DEPT+
Sbjct: 248 NGKVGKVLGHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPANVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILERLNKELVHNVALRVEETDDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDIEEQHQGSVMQAMGERKGDM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYDDL---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALYGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPIKMTLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKR 599
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERAEAAERVMDSNDLEKERGITILAKNTAINWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|421557631|ref|ZP_16003532.1| translation initiation factor IF-2 [Neisseria meningitidis 80179]
gi|402334344|gb|EJU69634.1| translation initiation factor IF-2 [Neisseria meningitidis 80179]
Length = 958
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/561 (60%), Positives = 449/561 (80%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 393 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 451
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 452 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 511
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 512 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 571
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI++SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 572 EAANPERIRQELTAHEVVPDEWGGDVQFINVSAKKGLNIDALLEAVLLEAEVLELTAPVD 631
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 632 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 691
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 692 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 751
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 752 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 811
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE L G EIRQ
Sbjct: 812 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQLTGTVEIRQ 871
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 872 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 931
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 932 LMIKGYNEIM-EGDQLECFDI 951
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 465 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 511
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 512 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 568
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 569 IDKEAANPERI 579
>gi|432619188|ref|ZP_19855284.1| GTP-binding protein TypA/BipA [Escherichia coli KTE75]
gi|431150120|gb|ELE51177.1| GTP-binding protein TypA/BipA [Escherichia coli KTE75]
Length = 607
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|323494556|ref|ZP_08099660.1| GTPase [Vibrio brasiliensis LMG 20546]
gi|323311159|gb|EGA64319.1| GTPase [Vibrio brasiliensis LMG 20546]
Length = 609
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A + A +M LFE
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATKEEGATAEDMEALFE 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V I+ G D K
Sbjct: 193 TIVEEVAAPEVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTII-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GLDR V +A +GDI+ ITG+ E+ I TIC ++ LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLDRHEVEQANAGDIIAITGLGELKISDTICAQNQVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFEMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLIANAMGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PIK+TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIKMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|15804456|ref|NP_290496.1| GTP-binding protein [Escherichia coli O157:H7 str. EDL933]
gi|15834047|ref|NP_312820.1| GTP-binding protein [Escherichia coli O157:H7 str. Sakai]
gi|24115159|ref|NP_709669.1| GTP-binding protein [Shigella flexneri 2a str. 301]
gi|26250635|ref|NP_756675.1| GTP-binding protein [Escherichia coli CFT073]
gi|49176434|ref|YP_026274.1| GTP-binding protein [Escherichia coli str. K-12 substr. MG1655]
gi|82778955|ref|YP_405304.1| GTP-binding protein [Shigella dysenteriae Sd197]
gi|91213417|ref|YP_543403.1| GTP-binding protein [Escherichia coli UTI89]
gi|110644211|ref|YP_671941.1| GTP-binding protein [Escherichia coli 536]
gi|117626144|ref|YP_859467.1| GTP-binding protein [Escherichia coli APEC O1]
gi|157157174|ref|YP_001465355.1| GTP-binding protein [Escherichia coli E24377A]
gi|157163343|ref|YP_001460661.1| GTP-binding protein [Escherichia coli HS]
gi|168748846|ref|ZP_02773868.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4113]
gi|168755543|ref|ZP_02780550.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4401]
gi|168761758|ref|ZP_02786765.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4501]
gi|168768160|ref|ZP_02793167.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4486]
gi|168775308|ref|ZP_02800315.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4196]
gi|168780776|ref|ZP_02805783.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4076]
gi|168786715|ref|ZP_02811722.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC869]
gi|168799563|ref|ZP_02824570.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC508]
gi|170022115|ref|YP_001727069.1| GTP-binding protein [Escherichia coli ATCC 8739]
gi|170083343|ref|YP_001732663.1| GTP-binding protein [Escherichia coli str. K-12 substr. DH10B]
gi|170683639|ref|YP_001746201.1| GTP-binding protein [Escherichia coli SMS-3-5]
gi|188496233|ref|ZP_03003503.1| GTP-binding protein TypA [Escherichia coli 53638]
gi|191166444|ref|ZP_03028275.1| GTP-binding protein TypA [Escherichia coli B7A]
gi|191173899|ref|ZP_03035419.1| GTP-binding protein TypA [Escherichia coli F11]
gi|193063896|ref|ZP_03044982.1| GTP-binding protein TypA [Escherichia coli E22]
gi|193067998|ref|ZP_03048963.1| GTP-binding protein TypA [Escherichia coli E110019]
gi|194428670|ref|ZP_03061207.1| GTP-binding protein TypA [Escherichia coli B171]
gi|195937509|ref|ZP_03082891.1| GTP-binding protein [Escherichia coli O157:H7 str. EC4024]
gi|208809322|ref|ZP_03251659.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4206]
gi|208813333|ref|ZP_03254662.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4045]
gi|208819085|ref|ZP_03259405.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4042]
gi|209398166|ref|YP_002273387.1| GTP-binding protein [Escherichia coli O157:H7 str. EC4115]
gi|209921345|ref|YP_002295429.1| GTP-binding protein [Escherichia coli SE11]
gi|215489204|ref|YP_002331635.1| GTP-binding protein [Escherichia coli O127:H6 str. E2348/69]
gi|217325262|ref|ZP_03441346.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. TW14588]
gi|218551140|ref|YP_002384931.1| GTP-binding protein [Escherichia fergusonii ATCC 35469]
gi|218556431|ref|YP_002389345.1| GTP-binding protein [Escherichia coli IAI1]
gi|218560946|ref|YP_002393859.1| GTP-binding protein [Escherichia coli S88]
gi|218692158|ref|YP_002400370.1| GTP-binding protein [Escherichia coli ED1a]
gi|218697585|ref|YP_002405252.1| GTP-binding protein [Escherichia coli 55989]
gi|218701430|ref|YP_002409059.1| GTP-binding protein [Escherichia coli IAI39]
gi|218707497|ref|YP_002415016.1| GTP-binding protein [Escherichia coli UMN026]
gi|222158578|ref|YP_002558717.1| GTP-binding protein typA/bipA [Escherichia coli LF82]
gi|227885392|ref|ZP_04003197.1| GTP-binding protein [Escherichia coli 83972]
gi|237702903|ref|ZP_04533384.1| GTP-binding protein TypA/BipA [Escherichia sp. 3_2_53FAA]
gi|238902938|ref|YP_002928734.1| GTP-binding protein [Escherichia coli BW2952]
gi|251787135|ref|YP_003001439.1| protein possibly involved in ribosome structure or function
[Escherichia coli BL21(DE3)]
gi|253775493|ref|YP_003038324.1| GTP-binding protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254163822|ref|YP_003046930.1| GTP-binding protein [Escherichia coli B str. REL606]
gi|254290572|ref|YP_003056320.1| GTP-binding protein [Escherichia coli BL21(DE3)]
gi|254795864|ref|YP_003080701.1| GTP-binding protein [Escherichia coli O157:H7 str. TW14359]
gi|260846361|ref|YP_003224139.1| GTP-binding protein BipA [Escherichia coli O103:H2 str. 12009]
gi|260857731|ref|YP_003231622.1| GTP-binding protein [Escherichia coli O26:H11 str. 11368]
gi|260870587|ref|YP_003236989.1| GTP-binding protein BipA [Escherichia coli O111:H- str. 11128]
gi|261223498|ref|ZP_05937779.1| GTP-binding protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261257261|ref|ZP_05949794.1| GTP-binding protein BipA [Escherichia coli O157:H7 str. FRIK966]
gi|291285281|ref|YP_003502099.1| GTP-binding protein typA/bipA [Escherichia coli O55:H7 str. CB9615]
gi|293407490|ref|ZP_06651409.1| GTPase [Escherichia coli FVEC1412]
gi|293413305|ref|ZP_06655966.1| GTP-binding protein TypA/BipA [Escherichia coli B354]
gi|293417332|ref|ZP_06659956.1| GTP-binding protein TypA/BipA [Escherichia coli B185]
gi|293470183|ref|ZP_06664594.1| GTP-binding protein TypA/BipA [Escherichia coli B088]
gi|298383233|ref|ZP_06992826.1| GTP-binding protein typA/bipA [Escherichia coli FVEC1302]
gi|300819251|ref|ZP_07099451.1| GTP-binding protein TypA/BipA [Escherichia coli MS 107-1]
gi|300823693|ref|ZP_07103819.1| GTP-binding protein TypA/BipA [Escherichia coli MS 119-7]
gi|300896914|ref|ZP_07115400.1| GTP-binding protein TypA/BipA [Escherichia coli MS 198-1]
gi|300906189|ref|ZP_07123901.1| GTP-binding protein TypA/BipA [Escherichia coli MS 84-1]
gi|300919056|ref|ZP_07135600.1| GTP-binding protein TypA/BipA [Escherichia coli MS 115-1]
gi|300925940|ref|ZP_07141774.1| GTP-binding protein TypA/BipA [Escherichia coli MS 182-1]
gi|300931696|ref|ZP_07147003.1| GTP-binding protein TypA/BipA [Escherichia coli MS 187-1]
gi|300937097|ref|ZP_07151959.1| GTP-binding protein TypA/BipA [Escherichia coli MS 21-1]
gi|300948163|ref|ZP_07162293.1| GTP-binding protein TypA/BipA [Escherichia coli MS 116-1]
gi|300957291|ref|ZP_07169518.1| GTP-binding protein TypA/BipA [Escherichia coli MS 175-1]
gi|300976529|ref|ZP_07173512.1| GTP-binding protein TypA/BipA [Escherichia coli MS 45-1]
gi|301023835|ref|ZP_07187569.1| GTP-binding protein TypA/BipA [Escherichia coli MS 69-1]
gi|301027914|ref|ZP_07191205.1| GTP-binding protein TypA/BipA [Escherichia coli MS 196-1]
gi|301046678|ref|ZP_07193806.1| GTP-binding protein TypA/BipA [Escherichia coli MS 185-1]
gi|301303342|ref|ZP_07209466.1| GTP-binding protein TypA/BipA [Escherichia coli MS 124-1]
gi|301328188|ref|ZP_07221316.1| GTP-binding protein TypA/BipA [Escherichia coli MS 78-1]
gi|301648448|ref|ZP_07248179.1| GTP-binding protein TypA/BipA [Escherichia coli MS 146-1]
gi|306813862|ref|ZP_07448038.1| GTP-binding protein [Escherichia coli NC101]
gi|307314007|ref|ZP_07593621.1| GTP-binding protein TypA [Escherichia coli W]
gi|309783779|ref|ZP_07678425.1| GTP-binding protein TypA/BipA [Shigella dysenteriae 1617]
gi|309797820|ref|ZP_07692203.1| GTP-binding protein TypA/BipA [Escherichia coli MS 145-7]
gi|312969385|ref|ZP_07783587.1| GTP-binding protein TypA/BipA [Escherichia coli 2362-75]
gi|312971842|ref|ZP_07786016.1| GTP-binding protein TypA/BipA [Escherichia coli 1827-70]
gi|331644602|ref|ZP_08345721.1| GTP-binding protein TypA/BipA [Escherichia coli H736]
gi|331649717|ref|ZP_08350797.1| GTP-binding protein TypA/BipA [Escherichia coli M605]
gi|331655555|ref|ZP_08356547.1| GTP-binding protein TypA/BipA [Escherichia coli M718]
gi|331660423|ref|ZP_08361357.1| GTP-binding protein TypA/BipA [Escherichia coli TA206]
gi|331665521|ref|ZP_08366419.1| GTP-binding protein TypA/BipA [Escherichia coli TA143]
gi|331670715|ref|ZP_08371551.1| GTP-binding protein TypA/BipA [Escherichia coli TA271]
gi|331675330|ref|ZP_08376080.1| GTP-binding protein TypA/BipA [Escherichia coli TA280]
gi|331679980|ref|ZP_08380642.1| GTP-binding protein TypA/BipA [Escherichia coli H591]
gi|331685609|ref|ZP_08386192.1| GTP-binding protein TypA/BipA [Escherichia coli H299]
gi|332282749|ref|ZP_08395162.1| GTP-binding protein [Shigella sp. D9]
gi|378715217|ref|YP_005280110.1| GTP-binding protein TypA [Escherichia coli KO11FL]
gi|383181129|ref|YP_005459134.1| GTP-binding protein [Shigella sonnei 53G]
gi|384545472|ref|YP_005729536.1| GTP-binding protein typA/bipA [Shigella flexneri 2002017]
gi|386282468|ref|ZP_10060119.1| GTP-binding protein TypA/BipA [Escherichia sp. 4_1_40B]
gi|386597604|ref|YP_006094004.1| GTP-binding protein TypA [Escherichia coli DH1]
gi|386601914|ref|YP_006103420.1| GTP-binding protein TypA [Escherichia coli IHE3034]
gi|386606465|ref|YP_006112765.1| GTP-binding protein [Escherichia coli UM146]
gi|386611241|ref|YP_006126727.1| GTP-binding protein [Escherichia coli W]
gi|386616694|ref|YP_006136360.1| GTP-binding protein TypA [Escherichia coli UMNK88]
gi|386621508|ref|YP_006141088.1| GTP-binding protein [Escherichia coli NA114]
gi|386626776|ref|YP_006146504.1| GTP-binding protein [Escherichia coli O7:K1 str. CE10]
gi|386631837|ref|YP_006151557.1| GTP-binding protein [Escherichia coli str. 'clone D i2']
gi|386636757|ref|YP_006156476.1| GTP-binding protein [Escherichia coli str. 'clone D i14']
gi|386641522|ref|YP_006108320.1| putative GTP-binding protein TypA/BipA [Escherichia coli ABU 83972]
gi|386699373|ref|YP_006163210.1| GTP-binding protein [Escherichia coli KO11FL]
gi|386711775|ref|YP_006175496.1| GTP-binding protein [Escherichia coli W]
gi|387509315|ref|YP_006161571.1| GTP-binding protein [Escherichia coli O55:H7 str. RM12579]
gi|387609672|ref|YP_006098528.1| putative lipopolysaccharide core biosynthesis GTP-binding protein
[Escherichia coli 042]
gi|387619181|ref|YP_006122203.1| GTP-binding protein [Escherichia coli O83:H1 str. NRG 857C]
gi|387623515|ref|YP_006131143.1| GTP-binding protein typA/bipA [Escherichia coli DH1]
gi|387831777|ref|YP_003351714.1| GTP-binding elongation factor [Escherichia coli SE15]
gi|387885092|ref|YP_006315394.1| GTP-binding protein [Escherichia coli Xuzhou21]
gi|388479387|ref|YP_491579.1| GTP-binding protein [Escherichia coli str. K-12 substr. W3110]
gi|407466873|ref|YP_006786685.1| GTP-binding protein [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407484401|ref|YP_006781551.1| GTP-binding protein [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484947|ref|YP_006772493.1| GTP-binding protein [Escherichia coli O104:H4 str. 2009EL-2050]
gi|414578754|ref|ZP_11435915.1| GTP-binding protein TypA/BipA [Shigella sonnei 3233-85]
gi|415773735|ref|ZP_11486319.1| GTP-binding protein TypA/BipA [Escherichia coli 3431]
gi|415786159|ref|ZP_11493387.1| GTP-binding protein TypA/BipA [Escherichia coli EPECa14]
gi|415799655|ref|ZP_11498912.1| GTP-binding protein TypA/BipA [Escherichia coli E128010]
gi|415810390|ref|ZP_11502797.1| GTP-binding protein TypA/BipA [Escherichia coli LT-68]
gi|415821920|ref|ZP_11510701.1| GTP-binding protein TypA/BipA [Escherichia coli OK1180]
gi|415831588|ref|ZP_11517239.1| GTP-binding protein TypA/BipA [Escherichia coli OK1357]
gi|415838353|ref|ZP_11520331.1| GTP-binding protein TypA/BipA [Escherichia coli RN587/1]
gi|415859073|ref|ZP_11533398.1| GTP-binding protein TypA/BipA [Shigella flexneri 2a str. 2457T]
gi|415865210|ref|ZP_11538095.1| GTP-binding protein TypA/BipA [Escherichia coli MS 85-1]
gi|415876612|ref|ZP_11542994.1| GTP-binding protein TypA/BipA [Escherichia coli MS 79-10]
gi|416279856|ref|ZP_11645001.1| GTP-binding protein TypA/BipA [Shigella boydii ATCC 9905]
gi|416315392|ref|ZP_11659330.1| GTP-binding protein TypA/BipA [Escherichia coli O157:H7 str. 1044]
gi|416319682|ref|ZP_11662234.1| GTP-binding protein TypA/BipA [Escherichia coli O157:H7 str. EC1212]
gi|416327978|ref|ZP_11667847.1| GTP-binding protein TypA/BipA [Escherichia coli O157:H7 str. 1125]
gi|416334839|ref|ZP_11671581.1| GTP-binding protein TypA/BipA [Escherichia coli WV_060327]
gi|416345280|ref|ZP_11678873.1| GTP-binding protein TypA/BipA [Escherichia coli EC4100B]
gi|416778895|ref|ZP_11876145.1| GTP-binding protein [Escherichia coli O157:H7 str. G5101]
gi|416790201|ref|ZP_11881038.1| GTP-binding protein [Escherichia coli O157:H- str. 493-89]
gi|416801974|ref|ZP_11885926.1| GTP-binding protein [Escherichia coli O157:H- str. H 2687]
gi|416812825|ref|ZP_11890848.1| GTP-binding protein [Escherichia coli O55:H7 str. 3256-97]
gi|416823310|ref|ZP_11895466.1| GTP-binding protein [Escherichia coli O55:H7 str. USDA 5905]
gi|416833622|ref|ZP_11900460.1| GTP-binding protein [Escherichia coli O157:H7 str. LSU-61]
gi|416900476|ref|ZP_11929721.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_7v]
gi|417116637|ref|ZP_11967498.1| GTP-binding protein TypA [Escherichia coli 1.2741]
gi|417121867|ref|ZP_11971240.1| GTP-binding protein TypA [Escherichia coli 97.0246]
gi|417132787|ref|ZP_11977572.1| GTP-binding protein TypA [Escherichia coli 5.0588]
gi|417142086|ref|ZP_11984661.1| GTP-binding protein TypA [Escherichia coli 97.0259]
gi|417149201|ref|ZP_11989292.1| GTP-binding protein TypA [Escherichia coli 1.2264]
gi|417156714|ref|ZP_11994338.1| GTP-binding protein TypA [Escherichia coli 96.0497]
gi|417161096|ref|ZP_11997429.1| GTP-binding protein TypA [Escherichia coli 99.0741]
gi|417175372|ref|ZP_12005168.1| GTP-binding protein TypA [Escherichia coli 3.2608]
gi|417185570|ref|ZP_12010971.1| GTP-binding protein TypA [Escherichia coli 93.0624]
gi|417201986|ref|ZP_12018236.1| GTP-binding protein TypA [Escherichia coli 4.0522]
gi|417208287|ref|ZP_12020306.1| GTP-binding protein TypA [Escherichia coli JB1-95]
gi|417222980|ref|ZP_12026420.1| GTP-binding protein TypA [Escherichia coli 96.154]
gi|417227923|ref|ZP_12029681.1| GTP-binding protein TypA [Escherichia coli 5.0959]
gi|417241825|ref|ZP_12037582.1| GTP-binding protein TypA [Escherichia coli 9.0111]
gi|417250039|ref|ZP_12041823.1| GTP-binding protein TypA [Escherichia coli 4.0967]
gi|417265081|ref|ZP_12052460.1| GTP-binding protein TypA [Escherichia coli 2.3916]
gi|417269707|ref|ZP_12057067.1| GTP-binding protein TypA [Escherichia coli 3.3884]
gi|417273038|ref|ZP_12060385.1| GTP-binding protein TypA [Escherichia coli 2.4168]
gi|417279312|ref|ZP_12066622.1| GTP-binding protein TypA [Escherichia coli 3.2303]
gi|417282101|ref|ZP_12069401.1| GTP-binding protein TypA [Escherichia coli 3003]
gi|417287977|ref|ZP_12075263.1| GTP-binding protein TypA [Escherichia coli TW07793]
gi|417293790|ref|ZP_12081069.1| GTP-binding protein TypA [Escherichia coli B41]
gi|417296526|ref|ZP_12083773.1| GTP-binding protein TypA [Escherichia coli 900105 (10e)]
gi|417310434|ref|ZP_12097247.1| GTP-binding elongation factor family protein [Escherichia coli
PCN033]
gi|417583492|ref|ZP_12234289.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_B2F1]
gi|417589012|ref|ZP_12239772.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_C165-02]
gi|417594339|ref|ZP_12245025.1| GTP-binding protein TypA/BipA [Escherichia coli 2534-86]
gi|417599307|ref|ZP_12249931.1| GTP-binding protein TypA/BipA [Escherichia coli 3030-1]
gi|417610629|ref|ZP_12261118.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_DG131-3]
gi|417615534|ref|ZP_12265981.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_EH250]
gi|417620542|ref|ZP_12270941.1| GTP-binding protein TypA/BipA [Escherichia coli G58-1]
gi|417626046|ref|ZP_12276333.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_H.1.8]
gi|417631352|ref|ZP_12281582.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_MHI813]
gi|417636828|ref|ZP_12287032.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_S1191]
gi|417641891|ref|ZP_12292013.1| GTP-binding protein TypA/BipA [Escherichia coli TX1999]
gi|417664516|ref|ZP_12314095.1| GTP-binding protein TypA/BipA [Escherichia coli AA86]
gi|417669461|ref|ZP_12318996.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_O31]
gi|417674877|ref|ZP_12324307.1| GTP-binding protein TypA/BipA [Shigella dysenteriae 155-74]
gi|417704249|ref|ZP_12353348.1| GTP-binding protein TypA/BipA [Shigella flexneri K-218]
gi|417709600|ref|ZP_12358618.1| GTP-binding protein TypA/BipA [Shigella flexneri VA-6]
gi|417714578|ref|ZP_12363531.1| GTP-binding protein TypA/BipA [Shigella flexneri K-272]
gi|417719497|ref|ZP_12368379.1| GTP-binding protein TypA/BipA [Shigella flexneri K-227]
gi|417725254|ref|ZP_12374043.1| GTP-binding protein TypA/BipA [Shigella flexneri K-304]
gi|417730549|ref|ZP_12379234.1| GTP-binding protein TypA/BipA [Shigella flexneri K-671]
gi|417740398|ref|ZP_12388967.1| GTP-binding protein TypA/BipA [Shigella flexneri 4343-70]
gi|417745478|ref|ZP_12393997.1| GTP-binding protein TypA/BipA [Shigella flexneri 2930-71]
gi|417758315|ref|ZP_12406374.1| GTP-binding protein TypA/BipA [Escherichia coli DEC2B]
gi|417807558|ref|ZP_12454485.1| GTP-binding protein [Escherichia coli O104:H4 str. LB226692]
gi|417829946|ref|ZP_12476486.1| GTP-binding protein TypA/BipA [Shigella flexneri J1713]
gi|417835297|ref|ZP_12481736.1| GTP-binding protein [Escherichia coli O104:H4 str. 01-09591]
gi|417867774|ref|ZP_12512808.1| typA [Escherichia coli O104:H4 str. C227-11]
gi|417944979|ref|ZP_12588217.1| GTP-binding protein [Escherichia coli XH140A]
gi|417976876|ref|ZP_12617666.1| GTP-binding protein [Escherichia coli XH001]
gi|418269942|ref|ZP_12888119.1| GTP-binding protein TypA/BipA [Shigella sonnei str. Moseley]
gi|418305499|ref|ZP_12917293.1| GTP-binding protein TypA/BipA [Escherichia coli UMNF18]
gi|418942584|ref|ZP_13495849.1| GTP-binding protein [Escherichia coli O157:H43 str. T22]
gi|419004693|ref|ZP_13552199.1| GTP-binding protein TypA/BipA [Escherichia coli DEC1B]
gi|419010374|ref|ZP_13557780.1| GTP-binding protein TypA/BipA [Escherichia coli DEC1C]
gi|419016078|ref|ZP_13563410.1| GTP-binding protein TypA/BipA [Escherichia coli DEC1D]
gi|419021003|ref|ZP_13568298.1| GTP-binding protein TypA/BipA [Escherichia coli DEC1E]
gi|419026456|ref|ZP_13573666.1| GTP-binding protein TypA/BipA [Escherichia coli DEC2A]
gi|419031607|ref|ZP_13578744.1| GTP-binding protein TypA/BipA [Escherichia coli DEC2C]
gi|419037257|ref|ZP_13584326.1| GTP-binding protein TypA/BipA [Escherichia coli DEC2D]
gi|419042302|ref|ZP_13589315.1| GTP-binding protein TypA/BipA [Escherichia coli DEC2E]
gi|419047975|ref|ZP_13594903.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3A]
gi|419053747|ref|ZP_13600611.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3B]
gi|419059783|ref|ZP_13606580.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3C]
gi|419065172|ref|ZP_13611878.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3D]
gi|419072214|ref|ZP_13617810.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3E]
gi|419078083|ref|ZP_13623578.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3F]
gi|419083192|ref|ZP_13628632.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4A]
gi|419089176|ref|ZP_13634523.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4B]
gi|419095106|ref|ZP_13640379.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4C]
gi|419100819|ref|ZP_13646003.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4D]
gi|419106505|ref|ZP_13651625.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4E]
gi|419111899|ref|ZP_13656947.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4F]
gi|419117434|ref|ZP_13662439.1| GTP-binding protein TypA/BipA [Escherichia coli DEC5A]
gi|419123161|ref|ZP_13668099.1| GTP-binding protein TypA/BipA [Escherichia coli DEC5B]
gi|419128699|ref|ZP_13673566.1| GTP-binding protein TypA/BipA [Escherichia coli DEC5C]
gi|419134166|ref|ZP_13678985.1| GTP-binding protein TypA/BipA [Escherichia coli DEC5D]
gi|419139232|ref|ZP_13684020.1| GTP-binding protein TypA/BipA [Escherichia coli DEC5E]
gi|419144978|ref|ZP_13689703.1| GTP-binding protein TypA/BipA [Escherichia coli DEC6A]
gi|419150878|ref|ZP_13695522.1| GTP-binding protein TypA/BipA [Escherichia coli DEC6B]
gi|419156386|ref|ZP_13700938.1| GTP-binding protein TypA/BipA [Escherichia coli DEC6C]
gi|419161742|ref|ZP_13706230.1| GTP-binding protein TypA/BipA [Escherichia coli DEC6D]
gi|419166835|ref|ZP_13711281.1| GTP-binding protein TypA/BipA [Escherichia coli DEC6E]
gi|419172828|ref|ZP_13716698.1| GTP-binding protein TypA/BipA [Escherichia coli DEC7A]
gi|419177619|ref|ZP_13721424.1| GTP-binding protein TypA/BipA [Escherichia coli DEC7B]
gi|419183391|ref|ZP_13726995.1| GTP-binding protein TypA/BipA [Escherichia coli DEC7C]
gi|419189005|ref|ZP_13732506.1| GTP-binding protein TypA/BipA [Escherichia coli DEC7D]
gi|419193940|ref|ZP_13737377.1| GTP-binding protein TypA/BipA [Escherichia coli DEC7E]
gi|419199658|ref|ZP_13742944.1| GTP-binding protein TypA/BipA [Escherichia coli DEC8A]
gi|419206016|ref|ZP_13749168.1| GTP-binding protein TypA/BipA [Escherichia coli DEC8B]
gi|419212394|ref|ZP_13755455.1| GTP-binding protein TypA/BipA [Escherichia coli DEC8C]
gi|419218369|ref|ZP_13761354.1| GTP-binding protein TypA/BipA [Escherichia coli DEC8D]
gi|419223974|ref|ZP_13766882.1| GTP-binding protein TypA/BipA [Escherichia coli DEC8E]
gi|419229252|ref|ZP_13772088.1| GTP-binding protein TypA/BipA [Escherichia coli DEC9A]
gi|419235161|ref|ZP_13777923.1| GTP-binding protein TypA/BipA [Escherichia coli DEC9B]
gi|419240104|ref|ZP_13782808.1| GTP-binding protein TypA/BipA [Escherichia coli DEC9C]
gi|419245971|ref|ZP_13788599.1| GTP-binding protein TypA/BipA [Escherichia coli DEC9D]
gi|419251530|ref|ZP_13794095.1| GTP-binding protein TypA/BipA [Escherichia coli DEC9E]
gi|419257337|ref|ZP_13799835.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10A]
gi|419263439|ref|ZP_13805845.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10B]
gi|419269350|ref|ZP_13811692.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10C]
gi|419274936|ref|ZP_13817222.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10D]
gi|419280379|ref|ZP_13822619.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10E]
gi|419286555|ref|ZP_13828715.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10F]
gi|419292086|ref|ZP_13834167.1| GTP-binding protein TypA/BipA [Escherichia coli DEC11A]
gi|419297365|ref|ZP_13839398.1| GTP-binding protein TypA/BipA [Escherichia coli DEC11B]
gi|419302957|ref|ZP_13844946.1| GTP-binding protein TypA/BipA [Escherichia coli DEC11C]
gi|419308902|ref|ZP_13850789.1| GTP-binding protein TypA/BipA [Escherichia coli DEC11D]
gi|419313867|ref|ZP_13855721.1| GTP-binding protein TypA/BipA [Escherichia coli DEC11E]
gi|419319366|ref|ZP_13861159.1| GTP-binding protein TypA/BipA [Escherichia coli DEC12A]
gi|419325295|ref|ZP_13866980.1| GTP-binding protein TypA/BipA [Escherichia coli DEC12B]
gi|419331586|ref|ZP_13873176.1| GTP-binding protein TypA/BipA [Escherichia coli DEC12C]
gi|419336736|ref|ZP_13878249.1| GTP-binding protein TypA/BipA [Escherichia coli DEC12D]
gi|419342454|ref|ZP_13883905.1| GTP-binding protein TypA/BipA [Escherichia coli DEC12E]
gi|419347649|ref|ZP_13889014.1| GTP-binding protein TypA/BipA [Escherichia coli DEC13A]
gi|419352110|ref|ZP_13893435.1| GTP-binding protein TypA/BipA [Escherichia coli DEC13B]
gi|419357586|ref|ZP_13898830.1| GTP-binding protein TypA/BipA [Escherichia coli DEC13C]
gi|419362556|ref|ZP_13903760.1| GTP-binding protein TypA/BipA [Escherichia coli DEC13D]
gi|419367669|ref|ZP_13908816.1| GTP-binding protein TypA/BipA [Escherichia coli DEC13E]
gi|419372403|ref|ZP_13913510.1| GTP-binding protein TypA/BipA [Escherichia coli DEC14A]
gi|419377999|ref|ZP_13919012.1| GTP-binding protein TypA/BipA [Escherichia coli DEC14B]
gi|419383393|ref|ZP_13924331.1| GTP-binding protein TypA/BipA [Escherichia coli DEC14C]
gi|419388634|ref|ZP_13929496.1| GTP-binding protein TypA/BipA [Escherichia coli DEC14D]
gi|419393803|ref|ZP_13934602.1| GTP-binding protein TypA/BipA [Escherichia coli DEC15A]
gi|419399266|ref|ZP_13940024.1| GTP-binding protein TypA/BipA [Escherichia coli DEC15B]
gi|419404511|ref|ZP_13945226.1| GTP-binding protein TypA/BipA [Escherichia coli DEC15C]
gi|419409677|ref|ZP_13950357.1| GTP-binding protein TypA/BipA [Escherichia coli DEC15D]
gi|419415235|ref|ZP_13955864.1| GTP-binding protein TypA/BipA [Escherichia coli DEC15E]
gi|419702730|ref|ZP_14230317.1| GTP-binding protein [Escherichia coli SCI-07]
gi|419812002|ref|ZP_14336873.1| GTP-binding protein [Escherichia coli O32:H37 str. P4]
gi|419866535|ref|ZP_14388894.1| GTP-binding protein [Escherichia coli O103:H25 str. CVM9340]
gi|419871493|ref|ZP_14393549.1| GTP-binding protein [Escherichia coli O103:H2 str. CVM9450]
gi|419876850|ref|ZP_14398520.1| GTP-binding protein [Escherichia coli O111:H11 str. CVM9534]
gi|419880803|ref|ZP_14402173.1| GTP-binding protein [Escherichia coli O111:H11 str. CVM9545]
gi|419891468|ref|ZP_14411553.1| GTP-binding protein [Escherichia coli O111:H8 str. CVM9570]
gi|419895931|ref|ZP_14415704.1| GTP-binding protein [Escherichia coli O111:H8 str. CVM9574]
gi|419904096|ref|ZP_14423103.1| GTP-binding protein [Escherichia coli O26:H11 str. CVM9942]
gi|419909417|ref|ZP_14427996.1| GTP-binding protein TypA [Escherichia coli O26:H11 str. CVM10026]
gi|419911936|ref|ZP_14430397.1| GTP-binding protein [Escherichia coli KD1]
gi|419921124|ref|ZP_14439219.1| GTP-binding protein [Escherichia coli KD2]
gi|419926181|ref|ZP_14443982.1| GTP-binding protein [Escherichia coli 541-15]
gi|419927725|ref|ZP_14445458.1| GTP-binding protein [Escherichia coli 541-1]
gi|419931862|ref|ZP_14449235.1| GTP-binding protein [Escherichia coli 576-1]
gi|419938073|ref|ZP_14454916.1| GTP-binding protein [Escherichia coli 75]
gi|419944316|ref|ZP_14460820.1| GTP-binding protein [Escherichia coli HM605]
gi|419947797|ref|ZP_14464112.1| GTP-binding protein [Escherichia coli CUMT8]
gi|420088864|ref|ZP_14600723.1| GTP-binding protein [Escherichia coli O111:H8 str. CVM9602]
gi|420097564|ref|ZP_14608860.1| GTP-binding protein [Escherichia coli O111:H8 str. CVM9634]
gi|420104959|ref|ZP_14615551.1| GTP-binding protein [Escherichia coli O111:H11 str. CVM9455]
gi|420111685|ref|ZP_14621508.1| GTP-binding protein [Escherichia coli O111:H11 str. CVM9553]
gi|420116421|ref|ZP_14625831.1| GTP-binding protein [Escherichia coli O26:H11 str. CVM10021]
gi|420122752|ref|ZP_14631662.1| GTP-binding protein [Escherichia coli O26:H11 str. CVM10030]
gi|420128748|ref|ZP_14637297.1| GTP-binding protein [Escherichia coli O26:H11 str. CVM10224]
gi|420134735|ref|ZP_14642837.1| GTP-binding protein [Escherichia coli O26:H11 str. CVM9952]
gi|420272463|ref|ZP_14774808.1| GTP-binding protein TypA/BipA [Escherichia coli PA22]
gi|420280155|ref|ZP_14782408.1| GTP-binding protein TypA/BipA [Escherichia coli TW06591]
gi|420289391|ref|ZP_14791570.1| GTP-binding protein TypA/BipA [Escherichia coli TW10246]
gi|420295057|ref|ZP_14797163.1| GTP-binding protein TypA/BipA [Escherichia coli TW11039]
gi|420306972|ref|ZP_14808956.1| GTP-binding protein TypA/BipA [Escherichia coli TW10119]
gi|420312306|ref|ZP_14814230.1| GTP-binding protein TypA/BipA [Escherichia coli EC1738]
gi|420317990|ref|ZP_14819857.1| GTP-binding protein TypA/BipA [Escherichia coli EC1734]
gi|420333474|ref|ZP_14835112.1| GTP-binding protein TypA/BipA [Shigella flexneri K-1770]
gi|420338350|ref|ZP_14839906.1| GTP-binding protein TypA/BipA [Shigella flexneri K-315]
gi|420343947|ref|ZP_14845410.1| GTP-binding protein TypA/BipA [Shigella flexneri K-404]
gi|420349807|ref|ZP_14851175.1| GTP-binding protein TypA/BipA [Shigella boydii 965-58]
gi|420361313|ref|ZP_14862253.1| GTP-binding protein TypA/BipA [Shigella sonnei 3226-85]
gi|420365919|ref|ZP_14866776.1| GTP-binding protein TypA/BipA [Shigella sonnei 4822-66]
gi|420388232|ref|ZP_14887560.1| GTP-binding protein TypA/BipA [Escherichia coli EPECa12]
gi|420394005|ref|ZP_14893248.1| GTP-binding protein TypA/BipA [Escherichia coli EPEC C342-62]
gi|421777447|ref|ZP_16214043.1| GTP-binding protein [Escherichia coli AD30]
gi|421814939|ref|ZP_16250636.1| GTP-binding protein TypA/BipA [Escherichia coli 8.0416]
gi|421820672|ref|ZP_16256153.1| GTP-binding protein TypA/BipA [Escherichia coli 10.0821]
gi|421826649|ref|ZP_16262000.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK920]
gi|421827520|ref|ZP_16262859.1| GTP-binding protein TypA/BipA [Escherichia coli PA7]
gi|422334901|ref|ZP_16415905.1| GTP-binding protein TypA/BipA [Escherichia coli 4_1_47FAA]
gi|422352182|ref|ZP_16432976.1| GTP-binding protein TypA/BipA [Escherichia coli MS 117-3]
gi|422356611|ref|ZP_16437291.1| GTP-binding protein TypA/BipA [Escherichia coli MS 110-3]
gi|422364503|ref|ZP_16445019.1| GTP-binding protein TypA/BipA [Escherichia coli MS 153-1]
gi|422368002|ref|ZP_16448422.1| GTP-binding protein TypA/BipA [Escherichia coli MS 16-3]
gi|422376121|ref|ZP_16456374.1| GTP-binding protein TypA/BipA [Escherichia coli MS 60-1]
gi|422381935|ref|ZP_16462098.1| GTP-binding protein TypA/BipA [Escherichia coli MS 57-2]
gi|422751919|ref|ZP_16805825.1| GTP-binding protein TypA/BipA [Escherichia coli H252]
gi|422757335|ref|ZP_16811155.1| GTP-binding protein TypA/BipA [Escherichia coli H263]
gi|422764503|ref|ZP_16818252.1| GTP-binding protein TypA/BipA [Escherichia coli E1167]
gi|422773750|ref|ZP_16827432.1| GTP-binding protein TypA/BipA [Escherichia coli E482]
gi|422778627|ref|ZP_16832274.1| GTP-binding protein TypA/BipA [Escherichia coli H120]
gi|422784561|ref|ZP_16837340.1| GTP-binding protein TypA/BipA [Escherichia coli TW10509]
gi|422789064|ref|ZP_16841797.1| GTP-binding protein TypA/BipA [Escherichia coli H489]
gi|422803149|ref|ZP_16851639.1| GTP-binding protein TypA/BipA [Escherichia coli M863]
gi|422807662|ref|ZP_16856091.1| GTP-binding protein TypA/BipA [Escherichia fergusonii B253]
gi|422832073|ref|ZP_16880198.1| GTP-binding protein TypA/BipA [Escherichia coli B093]
gi|422835417|ref|ZP_16883472.1| GTP-binding protein TypA/BipA [Escherichia coli E101]
gi|422841908|ref|ZP_16889876.1| GTP-binding protein TypA/BipA [Escherichia coli H397]
gi|422963572|ref|ZP_16973186.1| GTP-binding protein typA/BipA [Escherichia coli H494]
gi|422976181|ref|ZP_16977017.1| GTP-binding protein typA/BipA [Escherichia coli TA124]
gi|422990132|ref|ZP_16980904.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str. C227-11]
gi|422997029|ref|ZP_16987791.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. C236-11]
gi|423002125|ref|ZP_16992876.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 09-7901]
gi|423005780|ref|ZP_16996525.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str. 04-8351]
gi|423012341|ref|ZP_17003073.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-3677]
gi|423021572|ref|ZP_17012277.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4404]
gi|423026729|ref|ZP_17017423.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str. 11-4522]
gi|423032557|ref|ZP_17023243.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4623]
gi|423035432|ref|ZP_17026108.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4632
C1]
gi|423040553|ref|ZP_17031221.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4632
C2]
gi|423047238|ref|ZP_17037896.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4632
C3]
gi|423055776|ref|ZP_17044582.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4632
C4]
gi|423057780|ref|ZP_17046578.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str. 11-4632
C5]
gi|423703388|ref|ZP_17677820.1| GTP-binding protein TypA/BipA [Escherichia coli H730]
gi|423708176|ref|ZP_17682556.1| GTP-binding protein TypA/BipA [Escherichia coli B799]
gi|423728114|ref|ZP_17701877.1| GTP-binding protein TypA/BipA [Escherichia coli PA31]
gi|424080202|ref|ZP_17817139.1| GTP-binding protein TypA/BipA [Escherichia coli FDA505]
gi|424086597|ref|ZP_17823065.1| GTP-binding protein TypA/BipA [Escherichia coli FDA517]
gi|424093010|ref|ZP_17828916.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK1996]
gi|424099701|ref|ZP_17834936.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK1985]
gi|424105896|ref|ZP_17840608.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK1990]
gi|424112534|ref|ZP_17846743.1| GTP-binding protein TypA/BipA [Escherichia coli 93-001]
gi|424118468|ref|ZP_17852285.1| GTP-binding protein TypA/BipA [Escherichia coli PA3]
gi|424124667|ref|ZP_17857946.1| GTP-binding protein TypA/BipA [Escherichia coli PA5]
gi|424130831|ref|ZP_17863716.1| GTP-binding protein TypA/BipA [Escherichia coli PA9]
gi|424137143|ref|ZP_17869561.1| GTP-binding protein TypA/BipA [Escherichia coli PA10]
gi|424143700|ref|ZP_17875534.1| GTP-binding protein TypA/BipA [Escherichia coli PA14]
gi|424150070|ref|ZP_17881428.1| GTP-binding protein TypA/BipA [Escherichia coli PA15]
gi|424163798|ref|ZP_17886848.1| GTP-binding protein TypA/BipA [Escherichia coli PA24]
gi|424257738|ref|ZP_17892388.1| GTP-binding protein TypA/BipA [Escherichia coli PA25]
gi|424452404|ref|ZP_17904028.1| GTP-binding protein TypA/BipA [Escherichia coli PA32]
gi|424458567|ref|ZP_17909646.1| GTP-binding protein TypA/BipA [Escherichia coli PA33]
gi|424465099|ref|ZP_17915399.1| GTP-binding protein TypA/BipA [Escherichia coli PA39]
gi|424471332|ref|ZP_17921112.1| GTP-binding protein TypA/BipA [Escherichia coli PA41]
gi|424477820|ref|ZP_17927118.1| GTP-binding protein TypA/BipA [Escherichia coli PA42]
gi|424483605|ref|ZP_17932568.1| GTP-binding protein TypA/BipA [Escherichia coli TW07945]
gi|424489799|ref|ZP_17938318.1| GTP-binding protein TypA/BipA [Escherichia coli TW09098]
gi|424496496|ref|ZP_17944007.1| GTP-binding protein TypA/BipA [Escherichia coli TW09195]
gi|424503120|ref|ZP_17949986.1| GTP-binding protein TypA/BipA [Escherichia coli EC4203]
gi|424509392|ref|ZP_17955741.1| GTP-binding protein TypA/BipA [Escherichia coli EC4196]
gi|424516796|ref|ZP_17961362.1| GTP-binding protein TypA/BipA [Escherichia coli TW14313]
gi|424522925|ref|ZP_17967012.1| GTP-binding protein TypA/BipA [Escherichia coli TW14301]
gi|424528796|ref|ZP_17972490.1| GTP-binding protein TypA/BipA [Escherichia coli EC4421]
gi|424534938|ref|ZP_17978269.1| GTP-binding protein TypA/BipA [Escherichia coli EC4422]
gi|424541026|ref|ZP_17983953.1| GTP-binding protein TypA/BipA [Escherichia coli EC4013]
gi|424547175|ref|ZP_17989487.1| GTP-binding protein TypA/BipA [Escherichia coli EC4402]
gi|424553371|ref|ZP_17995180.1| GTP-binding protein TypA/BipA [Escherichia coli EC4439]
gi|424559572|ref|ZP_18000948.1| GTP-binding protein TypA/BipA [Escherichia coli EC4436]
gi|424572022|ref|ZP_18012538.1| GTP-binding protein TypA/BipA [Escherichia coli EC4448]
gi|424578180|ref|ZP_18018196.1| GTP-binding protein TypA/BipA [Escherichia coli EC1845]
gi|424584002|ref|ZP_18023631.1| GTP-binding protein TypA/BipA [Escherichia coli EC1863]
gi|424753477|ref|ZP_18181432.1| GTP-binding protein [Escherichia coli O26:H11 str. CFSAN001629]
gi|424759285|ref|ZP_18186953.1| GTP-binding protein [Escherichia coli O111:H11 str. CFSAN001630]
gi|424768914|ref|ZP_18196152.1| GTP-binding protein [Escherichia coli O111:H8 str. CFSAN001632]
gi|424818401|ref|ZP_18243552.1| GTP-binding protein [Escherichia fergusonii ECD227]
gi|425100676|ref|ZP_18503395.1| GTP-binding protein TypA/BipA [Escherichia coli 3.4870]
gi|425106751|ref|ZP_18509049.1| GTP-binding protein TypA/BipA [Escherichia coli 5.2239]
gi|425112751|ref|ZP_18514655.1| GTP-binding protein TypA/BipA [Escherichia coli 6.0172]
gi|425117499|ref|ZP_18519269.1| GTP-binding protein TypA/BipA [Escherichia coli 8.0566]
gi|425122215|ref|ZP_18523883.1| GTP-binding protein TypA/BipA [Escherichia coli 8.0569]
gi|425128681|ref|ZP_18529834.1| GTP-binding protein TypA/BipA [Escherichia coli 8.0586]
gi|425134448|ref|ZP_18535283.1| GTP-binding protein TypA/BipA [Escherichia coli 8.2524]
gi|425141042|ref|ZP_18541406.1| GTP-binding protein TypA/BipA [Escherichia coli 10.0833]
gi|425146716|ref|ZP_18546692.1| GTP-binding protein TypA/BipA [Escherichia coli 10.0869]
gi|425152832|ref|ZP_18552429.1| GTP-binding protein TypA/BipA [Escherichia coli 88.0221]
gi|425158731|ref|ZP_18557977.1| GTP-binding protein TypA/BipA [Escherichia coli PA34]
gi|425165050|ref|ZP_18563920.1| GTP-binding protein TypA/BipA [Escherichia coli FDA506]
gi|425170798|ref|ZP_18569255.1| GTP-binding protein TypA/BipA [Escherichia coli FDA507]
gi|425176842|ref|ZP_18574945.1| GTP-binding protein TypA/BipA [Escherichia coli FDA504]
gi|425182901|ref|ZP_18580581.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK1999]
gi|425189202|ref|ZP_18586456.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK1997]
gi|425214542|ref|ZP_18609928.1| GTP-binding protein TypA/BipA [Escherichia coli PA4]
gi|425220670|ref|ZP_18615616.1| GTP-binding protein TypA/BipA [Escherichia coli PA23]
gi|425227315|ref|ZP_18621765.1| GTP-binding protein TypA/BipA [Escherichia coli PA49]
gi|425233472|ref|ZP_18627495.1| GTP-binding protein TypA/BipA [Escherichia coli PA45]
gi|425239394|ref|ZP_18633098.1| GTP-binding protein TypA/BipA [Escherichia coli TT12B]
gi|425245630|ref|ZP_18638920.1| GTP-binding protein TypA/BipA [Escherichia coli MA6]
gi|425251824|ref|ZP_18644751.1| GTP-binding protein TypA/BipA [Escherichia coli 5905]
gi|425257624|ref|ZP_18650102.1| GTP-binding protein TypA/BipA [Escherichia coli CB7326]
gi|425263878|ref|ZP_18655853.1| GTP-binding protein TypA/BipA [Escherichia coli EC96038]
gi|425269870|ref|ZP_18661480.1| GTP-binding protein TypA/BipA [Escherichia coli 5412]
gi|425275162|ref|ZP_18666540.1| GTP-binding protein TypA/BipA [Escherichia coli TW15901]
gi|425280322|ref|ZP_18671533.1| GTP-binding protein TypA/BipA [Escherichia coli ARS4.2123]
gi|425285739|ref|ZP_18676750.1| GTP-binding protein TypA/BipA [Escherichia coli TW00353]
gi|425291085|ref|ZP_18681891.1| GTP-binding protein TypA/BipA [Escherichia coli 3006]
gi|425297342|ref|ZP_18687449.1| GTP-binding protein TypA/BipA [Escherichia coli PA38]
gi|425302772|ref|ZP_18692649.1| GTP-binding protein TypA/BipA [Escherichia coli 07798]
gi|425307677|ref|ZP_18697339.1| GTP-binding protein TypA/BipA [Escherichia coli N1]
gi|425314041|ref|ZP_18703191.1| GTP-binding protein TypA/BipA [Escherichia coli EC1735]
gi|425320023|ref|ZP_18708783.1| GTP-binding protein TypA/BipA [Escherichia coli EC1736]
gi|425326163|ref|ZP_18714472.1| GTP-binding protein TypA/BipA [Escherichia coli EC1737]
gi|425332473|ref|ZP_18720269.1| GTP-binding protein TypA/BipA [Escherichia coli EC1846]
gi|425338650|ref|ZP_18725972.1| GTP-binding protein TypA/BipA [Escherichia coli EC1847]
gi|425344944|ref|ZP_18731816.1| GTP-binding protein TypA/BipA [Escherichia coli EC1848]
gi|425350782|ref|ZP_18737224.1| GTP-binding protein TypA/BipA [Escherichia coli EC1849]
gi|425357055|ref|ZP_18743100.1| GTP-binding protein TypA/BipA [Escherichia coli EC1850]
gi|425363005|ref|ZP_18748636.1| GTP-binding protein TypA/BipA [Escherichia coli EC1856]
gi|425369271|ref|ZP_18754331.1| GTP-binding protein TypA/BipA [Escherichia coli EC1862]
gi|425375576|ref|ZP_18760198.1| GTP-binding protein TypA/BipA [Escherichia coli EC1864]
gi|425382214|ref|ZP_18766192.1| GTP-binding protein TypA/BipA [Escherichia coli EC1865]
gi|425388462|ref|ZP_18772004.1| GTP-binding protein TypA/BipA [Escherichia coli EC1866]
gi|425395190|ref|ZP_18778279.1| GTP-binding protein TypA/BipA [Escherichia coli EC1868]
gi|425401245|ref|ZP_18783934.1| GTP-binding protein TypA/BipA [Escherichia coli EC1869]
gi|425407341|ref|ZP_18789545.1| GTP-binding protein TypA/BipA [Escherichia coli EC1870]
gi|425413698|ref|ZP_18795443.1| GTP-binding protein TypA/BipA [Escherichia coli NE098]
gi|425420096|ref|ZP_18801345.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK523]
gi|425424894|ref|ZP_18806038.1| GTP-binding protein TypA/BipA [Escherichia coli 0.1288]
gi|425431310|ref|ZP_18811902.1| GTP-binding protein TypA/BipA [Escherichia coli 0.1304]
gi|427807063|ref|ZP_18974130.1| gtp-binding protein typa/bipa [Escherichia coli chi7122]
gi|428949717|ref|ZP_19021972.1| GTP-binding protein TypA/BipA [Escherichia coli 88.1467]
gi|428955790|ref|ZP_19027563.1| GTP-binding protein TypA/BipA [Escherichia coli 88.1042]
gi|428961920|ref|ZP_19033176.1| GTP-binding protein TypA/BipA [Escherichia coli 89.0511]
gi|428968411|ref|ZP_19039098.1| GTP-binding protein TypA/BipA [Escherichia coli 90.0091]
gi|428974152|ref|ZP_19044446.1| GTP-binding protein TypA/BipA [Escherichia coli 90.0039]
gi|428980648|ref|ZP_19050437.1| GTP-binding protein TypA/BipA [Escherichia coli 90.2281]
gi|428986373|ref|ZP_19055745.1| GTP-binding protein TypA/BipA [Escherichia coli 93.0055]
gi|428992508|ref|ZP_19061478.1| GTP-binding protein TypA/BipA [Escherichia coli 93.0056]
gi|428998402|ref|ZP_19066976.1| GTP-binding protein TypA/BipA [Escherichia coli 94.0618]
gi|429004791|ref|ZP_19072833.1| GTP-binding protein TypA/BipA [Escherichia coli 95.0183]
gi|429010829|ref|ZP_19078208.1| GTP-binding protein TypA/BipA [Escherichia coli 95.1288]
gi|429017292|ref|ZP_19084151.1| GTP-binding protein TypA/BipA [Escherichia coli 95.0943]
gi|429023203|ref|ZP_19089701.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0428]
gi|429029215|ref|ZP_19095169.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0427]
gi|429035357|ref|ZP_19100863.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0939]
gi|429041466|ref|ZP_19106537.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0932]
gi|429047356|ref|ZP_19112051.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0107]
gi|429052644|ref|ZP_19117199.1| GTP-binding protein TypA/BipA [Escherichia coli 97.0003]
gi|429058206|ref|ZP_19122445.1| GTP-binding protein TypA/BipA [Escherichia coli 97.1742]
gi|429063721|ref|ZP_19127675.1| GTP-binding protein TypA/BipA [Escherichia coli 97.0007]
gi|429069923|ref|ZP_19133343.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0672]
gi|429075699|ref|ZP_19138940.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0678]
gi|429080947|ref|ZP_19144070.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0713]
gi|429721613|ref|ZP_19256526.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429773689|ref|ZP_19305701.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02030]
gi|429778873|ref|ZP_19310837.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str.
11-02033-1]
gi|429782708|ref|ZP_19314631.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02092]
gi|429788101|ref|ZP_19319986.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02093]
gi|429794540|ref|ZP_19326379.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02281]
gi|429800500|ref|ZP_19332287.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02318]
gi|429804112|ref|ZP_19335867.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02913]
gi|429808760|ref|ZP_19340474.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-03439]
gi|429814702|ref|ZP_19346370.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-04080]
gi|429819662|ref|ZP_19351290.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-03943]
gi|429835593|ref|ZP_19365817.1| GTP-binding protein TypA/BipA [Escherichia coli 97.0010]
gi|429905981|ref|ZP_19371955.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429910115|ref|ZP_19376075.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429916014|ref|ZP_19381958.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429921063|ref|ZP_19386988.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429926869|ref|ZP_19392779.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429930800|ref|ZP_19396699.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429937342|ref|ZP_19403227.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429943021|ref|ZP_19408892.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429945701|ref|ZP_19411560.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429953265|ref|ZP_19419108.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429956609|ref|ZP_19422439.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432355902|ref|ZP_19599161.1| GTP-binding protein TypA/BipA [Escherichia coli KTE2]
gi|432360341|ref|ZP_19603551.1| GTP-binding protein TypA/BipA [Escherichia coli KTE4]
gi|432365142|ref|ZP_19608294.1| GTP-binding protein typA/BipA [Escherichia coli KTE5]
gi|432379102|ref|ZP_19622082.1| GTP-binding protein TypA/BipA [Escherichia coli KTE12]
gi|432383785|ref|ZP_19626708.1| GTP-binding protein TypA/BipA [Escherichia coli KTE15]
gi|432384800|ref|ZP_19627707.1| GTP-binding protein typA/BipA [Escherichia coli KTE16]
gi|432394537|ref|ZP_19637352.1| GTP-binding protein TypA/BipA [Escherichia coli KTE21]
gi|432395275|ref|ZP_19638072.1| GTP-binding protein TypA/BipA [Escherichia coli KTE25]
gi|432404267|ref|ZP_19647008.1| GTP-binding protein TypA/BipA [Escherichia coli KTE26]
gi|432408957|ref|ZP_19651657.1| GTP-binding protein TypA/BipA [Escherichia coli KTE28]
gi|432414182|ref|ZP_19656832.1| GTP-binding protein TypA/BipA [Escherichia coli KTE39]
gi|432419390|ref|ZP_19661978.1| GTP-binding protein TypA/BipA [Escherichia coli KTE44]
gi|432424290|ref|ZP_19666825.1| GTP-binding protein TypA/BipA [Escherichia coli KTE178]
gi|432428534|ref|ZP_19671012.1| GTP-binding protein TypA/BipA [Escherichia coli KTE181]
gi|432434144|ref|ZP_19676563.1| GTP-binding protein TypA/BipA [Escherichia coli KTE187]
gi|432438845|ref|ZP_19681220.1| GTP-binding protein typA/BipA [Escherichia coli KTE188]
gi|432443419|ref|ZP_19685749.1| GTP-binding protein TypA/BipA [Escherichia coli KTE189]
gi|432448562|ref|ZP_19690856.1| GTP-binding protein TypA/BipA [Escherichia coli KTE191]
gi|432452132|ref|ZP_19694386.1| GTP-binding protein TypA/BipA [Escherichia coli KTE193]
gi|432459030|ref|ZP_19701202.1| GTP-binding protein TypA/BipA [Escherichia coli KTE201]
gi|432463235|ref|ZP_19705364.1| GTP-binding protein TypA/BipA [Escherichia coli KTE204]
gi|432468226|ref|ZP_19710301.1| GTP-binding protein typA/BipA [Escherichia coli KTE205]
gi|432473240|ref|ZP_19715274.1| GTP-binding protein TypA/BipA [Escherichia coli KTE206]
gi|432478230|ref|ZP_19720213.1| GTP-binding protein typA/BipA [Escherichia coli KTE208]
gi|432483281|ref|ZP_19725227.1| GTP-binding protein TypA/BipA [Escherichia coli KTE210]
gi|432487621|ref|ZP_19729527.1| GTP-binding protein TypA/BipA [Escherichia coli KTE212]
gi|432491702|ref|ZP_19733559.1| GTP-binding protein typA/BipA [Escherichia coli KTE213]
gi|432493139|ref|ZP_19734967.1| GTP-binding protein TypA/BipA [Escherichia coli KTE214]
gi|432502443|ref|ZP_19744190.1| GTP-binding protein typA/BipA [Escherichia coli KTE216]
gi|432506780|ref|ZP_19748496.1| GTP-binding protein TypA/BipA [Escherichia coli KTE220]
gi|432516277|ref|ZP_19753490.1| GTP-binding protein TypA/BipA [Escherichia coli KTE224]
gi|432520083|ref|ZP_19757260.1| GTP-binding protein TypA/BipA [Escherichia coli KTE228]
gi|432526361|ref|ZP_19763471.1| GTP-binding protein TypA/BipA [Escherichia coli KTE230]
gi|432528723|ref|ZP_19765793.1| GTP-binding protein TypA/BipA [Escherichia coli KTE233]
gi|432531657|ref|ZP_19768678.1| GTP-binding protein TypA/BipA [Escherichia coli KTE234]
gi|432540251|ref|ZP_19777140.1| GTP-binding protein TypA/BipA [Escherichia coli KTE235]
gi|432545705|ref|ZP_19782526.1| GTP-binding protein TypA/BipA [Escherichia coli KTE236]
gi|432551183|ref|ZP_19787930.1| GTP-binding protein TypA/BipA [Escherichia coli KTE237]
gi|432556120|ref|ZP_19792833.1| GTP-binding protein typA/BipA [Escherichia coli KTE47]
gi|432561156|ref|ZP_19797806.1| GTP-binding protein TypA/BipA [Escherichia coli KTE49]
gi|432566249|ref|ZP_19802803.1| GTP-binding protein TypA/BipA [Escherichia coli KTE51]
gi|432571162|ref|ZP_19807665.1| GTP-binding protein TypA/BipA [Escherichia coli KTE53]
gi|432576133|ref|ZP_19812599.1| GTP-binding protein TypA/BipA [Escherichia coli KTE55]
gi|432578139|ref|ZP_19814583.1| GTP-binding protein TypA/BipA [Escherichia coli KTE56]
gi|432585415|ref|ZP_19821804.1| GTP-binding protein TypA/BipA [Escherichia coli KTE57]
gi|432590342|ref|ZP_19826691.1| GTP-binding protein TypA/BipA [Escherichia coli KTE58]
gi|432595141|ref|ZP_19831449.1| GTP-binding protein typA/BipA [Escherichia coli KTE60]
gi|432598697|ref|ZP_19834971.1| GTP-binding protein TypA/BipA [Escherichia coli KTE62]
gi|432604698|ref|ZP_19840923.1| GTP-binding protein TypA/BipA [Escherichia coli KTE66]
gi|432605325|ref|ZP_19841533.1| GTP-binding protein TypA/BipA [Escherichia coli KTE67]
gi|432613891|ref|ZP_19850046.1| GTP-binding protein TypA/BipA [Escherichia coli KTE72]
gi|432624239|ref|ZP_19860250.1| GTP-binding protein TypA/BipA [Escherichia coli KTE76]
gi|432629488|ref|ZP_19865451.1| GTP-binding protein TypA/BipA [Escherichia coli KTE77]
gi|432633815|ref|ZP_19869730.1| GTP-binding protein TypA/BipA [Escherichia coli KTE80]
gi|432634770|ref|ZP_19870666.1| GTP-binding protein TypA/BipA [Escherichia coli KTE81]
gi|432643467|ref|ZP_19879286.1| GTP-binding protein TypA/BipA [Escherichia coli KTE83]
gi|432648559|ref|ZP_19884342.1| GTP-binding protein TypA/BipA [Escherichia coli KTE86]
gi|432653541|ref|ZP_19889277.1| GTP-binding protein TypA/BipA [Escherichia coli KTE87]
gi|432658124|ref|ZP_19893819.1| GTP-binding protein TypA/BipA [Escherichia coli KTE93]
gi|432663113|ref|ZP_19898740.1| GTP-binding protein TypA/BipA [Escherichia coli KTE111]
gi|432663589|ref|ZP_19899197.1| GTP-binding protein TypA/BipA [Escherichia coli KTE116]
gi|432672958|ref|ZP_19908474.1| GTP-binding protein TypA/BipA [Escherichia coli KTE119]
gi|432677046|ref|ZP_19912485.1| GTP-binding protein typA/BipA [Escherichia coli KTE142]
gi|432682663|ref|ZP_19918013.1| GTP-binding protein TypA/BipA [Escherichia coli KTE143]
gi|432687696|ref|ZP_19922982.1| GTP-binding protein TypA/BipA [Escherichia coli KTE156]
gi|432689194|ref|ZP_19924458.1| GTP-binding protein typA/BipA [Escherichia coli KTE161]
gi|432696751|ref|ZP_19931940.1| GTP-binding protein TypA/BipA [Escherichia coli KTE162]
gi|432701403|ref|ZP_19936545.1| GTP-binding protein TypA/BipA [Escherichia coli KTE169]
gi|432706598|ref|ZP_19941690.1| GTP-binding protein TypA/BipA [Escherichia coli KTE171]
gi|432708280|ref|ZP_19943354.1| GTP-binding protein TypA/BipA [Escherichia coli KTE6]
gi|432715745|ref|ZP_19950768.1| GTP-binding protein typA/BipA [Escherichia coli KTE8]
gi|432716498|ref|ZP_19951510.1| GTP-binding protein TypA/BipA [Escherichia coli KTE9]
gi|432725353|ref|ZP_19960265.1| GTP-binding protein TypA/BipA [Escherichia coli KTE17]
gi|432729961|ref|ZP_19964832.1| GTP-binding protein TypA/BipA [Escherichia coli KTE18]
gi|432734640|ref|ZP_19969460.1| GTP-binding protein typA/BipA [Escherichia coli KTE45]
gi|432734912|ref|ZP_19969725.1| GTP-binding protein typA/BipA [Escherichia coli KTE42]
gi|432743650|ref|ZP_19978362.1| GTP-binding protein typA/BipA [Escherichia coli KTE23]
gi|432747862|ref|ZP_19982522.1| GTP-binding protein TypA/BipA [Escherichia coli KTE43]
gi|432752322|ref|ZP_19986898.1| GTP-binding protein typA/BipA [Escherichia coli KTE29]
gi|432756845|ref|ZP_19991387.1| GTP-binding protein TypA/BipA [Escherichia coli KTE22]
gi|432761725|ref|ZP_19996211.1| GTP-binding protein typA/BipA [Escherichia coli KTE46]
gi|432762728|ref|ZP_19997188.1| GTP-binding protein TypA/BipA [Escherichia coli KTE48]
gi|432768244|ref|ZP_20002633.1| GTP-binding protein TypA/BipA [Escherichia coli KTE50]
gi|432772644|ref|ZP_20006953.1| GTP-binding protein TypA/BipA [Escherichia coli KTE54]
gi|432781050|ref|ZP_20015264.1| GTP-binding protein TypA/BipA [Escherichia coli KTE59]
gi|432781209|ref|ZP_20015418.1| GTP-binding protein typA/BipA [Escherichia coli KTE63]
gi|432789914|ref|ZP_20024039.1| GTP-binding protein TypA/BipA [Escherichia coli KTE65]
gi|432795129|ref|ZP_20029199.1| GTP-binding protein TypA/BipA [Escherichia coli KTE78]
gi|432796640|ref|ZP_20030672.1| GTP-binding protein TypA/BipA [Escherichia coli KTE79]
gi|432799779|ref|ZP_20033779.1| GTP-binding protein TypA/BipA [Escherichia coli KTE84]
gi|432808112|ref|ZP_20042023.1| GTP-binding protein TypA/BipA [Escherichia coli KTE91]
gi|432811615|ref|ZP_20045469.1| GTP-binding protein TypA/BipA [Escherichia coli KTE101]
gi|432817658|ref|ZP_20051407.1| GTP-binding protein TypA/BipA [Escherichia coli KTE115]
gi|432818678|ref|ZP_20052398.1| GTP-binding protein TypA/BipA [Escherichia coli KTE118]
gi|432824810|ref|ZP_20058472.1| GTP-binding protein TypA/BipA [Escherichia coli KTE123]
gi|432829484|ref|ZP_20063097.1| GTP-binding protein TypA/BipA [Escherichia coli KTE135]
gi|432836879|ref|ZP_20070388.1| GTP-binding protein TypA/BipA [Escherichia coli KTE136]
gi|432841727|ref|ZP_20075180.1| GTP-binding protein typA/BipA [Escherichia coli KTE140]
gi|432847125|ref|ZP_20079619.1| GTP-binding protein typA/BipA [Escherichia coli KTE141]
gi|432855936|ref|ZP_20083560.1| GTP-binding protein typA/BipA [Escherichia coli KTE144]
gi|432866929|ref|ZP_20089080.1| GTP-binding protein TypA/BipA [Escherichia coli KTE146]
gi|432871796|ref|ZP_20091790.1| GTP-binding protein TypA/BipA [Escherichia coli KTE147]
gi|432878278|ref|ZP_20095688.1| GTP-binding protein TypA/BipA [Escherichia coli KTE154]
gi|432882617|ref|ZP_20098339.1| GTP-binding protein TypA/BipA [Escherichia coli KTE158]
gi|432891508|ref|ZP_20104199.1| GTP-binding protein TypA/BipA [Escherichia coli KTE165]
gi|432901537|ref|ZP_20111556.1| GTP-binding protein TypA/BipA [Escherichia coli KTE192]
gi|432907733|ref|ZP_20116093.1| GTP-binding protein TypA/BipA [Escherichia coli KTE194]
gi|432915535|ref|ZP_20120790.1| GTP-binding protein TypA/BipA [Escherichia coli KTE190]
gi|432923166|ref|ZP_20125861.1| GTP-binding protein typA/BipA [Escherichia coli KTE173]
gi|432929921|ref|ZP_20130797.1| GTP-binding protein TypA/BipA [Escherichia coli KTE175]
gi|432931663|ref|ZP_20131642.1| GTP-binding protein TypA/BipA [Escherichia coli KTE184]
gi|432940733|ref|ZP_20138607.1| GTP-binding protein TypA/BipA [Escherichia coli KTE183]
gi|432943559|ref|ZP_20140394.1| GTP-binding protein TypA/BipA [Escherichia coli KTE196]
gi|432951145|ref|ZP_20144865.1| GTP-binding protein TypA/BipA [Escherichia coli KTE197]
gi|432964720|ref|ZP_20153745.1| GTP-binding protein TypA/BipA [Escherichia coli KTE202]
gi|432965630|ref|ZP_20154551.1| GTP-binding protein typA/BipA [Escherichia coli KTE203]
gi|432969463|ref|ZP_20158370.1| GTP-binding protein TypA/BipA [Escherichia coli KTE207]
gi|432976111|ref|ZP_20164942.1| GTP-binding protein TypA/BipA [Escherichia coli KTE209]
gi|432983409|ref|ZP_20172158.1| GTP-binding protein TypA/BipA [Escherichia coli KTE211]
gi|432987734|ref|ZP_20176443.1| GTP-binding protein TypA/BipA [Escherichia coli KTE215]
gi|432988382|ref|ZP_20177059.1| GTP-binding protein TypA/BipA [Escherichia coli KTE217]
gi|432993091|ref|ZP_20181721.1| GTP-binding protein TypA/BipA [Escherichia coli KTE218]
gi|433002288|ref|ZP_20190803.1| GTP-binding protein TypA/BipA [Escherichia coli KTE223]
gi|433010090|ref|ZP_20198499.1| GTP-binding protein TypA/BipA [Escherichia coli KTE229]
gi|433016209|ref|ZP_20204531.1| GTP-binding protein TypA/BipA [Escherichia coli KTE104]
gi|433021124|ref|ZP_20209198.1| GTP-binding protein TypA/BipA [Escherichia coli KTE105]
gi|433025798|ref|ZP_20213761.1| GTP-binding protein TypA/BipA [Escherichia coli KTE106]
gi|433030830|ref|ZP_20218672.1| GTP-binding protein TypA/BipA [Escherichia coli KTE109]
gi|433035795|ref|ZP_20223480.1| GTP-binding protein TypA/BipA [Escherichia coli KTE112]
gi|433040905|ref|ZP_20228488.1| GTP-binding protein TypA/BipA [Escherichia coli KTE113]
gi|433045401|ref|ZP_20232872.1| GTP-binding protein TypA/BipA [Escherichia coli KTE117]
gi|433050340|ref|ZP_20237656.1| GTP-binding protein TypA/BipA [Escherichia coli KTE120]
gi|433055498|ref|ZP_20242648.1| GTP-binding protein TypA/BipA [Escherichia coli KTE122]
gi|433060413|ref|ZP_20247441.1| GTP-binding protein TypA/BipA [Escherichia coli KTE124]
gi|433065340|ref|ZP_20252239.1| GTP-binding protein TypA/BipA [Escherichia coli KTE125]
gi|433070234|ref|ZP_20256993.1| GTP-binding protein typA/BipA [Escherichia coli KTE128]
gi|433075174|ref|ZP_20261805.1| GTP-binding protein TypA/BipA [Escherichia coli KTE129]
gi|433080099|ref|ZP_20266612.1| GTP-binding protein TypA/BipA [Escherichia coli KTE131]
gi|433084816|ref|ZP_20271258.1| GTP-binding protein TypA/BipA [Escherichia coli KTE133]
gi|433089618|ref|ZP_20275972.1| GTP-binding protein typA/BipA [Escherichia coli KTE137]
gi|433094262|ref|ZP_20280508.1| GTP-binding protein TypA/BipA [Escherichia coli KTE138]
gi|433098716|ref|ZP_20284879.1| GTP-binding protein TypA/BipA [Escherichia coli KTE139]
gi|433103487|ref|ZP_20289553.1| GTP-binding protein TypA/BipA [Escherichia coli KTE145]
gi|433108148|ref|ZP_20294103.1| GTP-binding protein TypA/BipA [Escherichia coli KTE148]
gi|433113163|ref|ZP_20299008.1| GTP-binding protein TypA/BipA [Escherichia coli KTE150]
gi|433117821|ref|ZP_20303597.1| GTP-binding protein TypA/BipA [Escherichia coli KTE153]
gi|433122505|ref|ZP_20308157.1| GTP-binding protein TypA/BipA [Escherichia coli KTE157]
gi|433127523|ref|ZP_20313060.1| GTP-binding protein TypA/BipA [Escherichia coli KTE160]
gi|433132447|ref|ZP_20317865.1| GTP-binding protein TypA/BipA [Escherichia coli KTE163]
gi|433137119|ref|ZP_20322440.1| GTP-binding protein TypA/BipA [Escherichia coli KTE166]
gi|433141596|ref|ZP_20326830.1| GTP-binding protein TypA/BipA [Escherichia coli KTE167]
gi|433146526|ref|ZP_20331653.1| GTP-binding protein typA/BipA [Escherichia coli KTE168]
gi|433151548|ref|ZP_20336541.1| GTP-binding protein TypA/BipA [Escherichia coli KTE174]
gi|433161024|ref|ZP_20345836.1| GTP-binding protein TypA/BipA [Escherichia coli KTE177]
gi|433165908|ref|ZP_20350629.1| GTP-binding protein TypA/BipA [Escherichia coli KTE179]
gi|433170903|ref|ZP_20355515.1| GTP-binding protein typA/BipA [Escherichia coli KTE180]
gi|433175758|ref|ZP_20360259.1| GTP-binding protein TypA/BipA [Escherichia coli KTE232]
gi|433180743|ref|ZP_20365112.1| GTP-binding protein TypA/BipA [Escherichia coli KTE82]
gi|433185631|ref|ZP_20369861.1| GTP-binding protein TypA/BipA [Escherichia coli KTE85]
gi|433190695|ref|ZP_20374778.1| GTP-binding protein TypA/BipA [Escherichia coli KTE88]
gi|433195924|ref|ZP_20379888.1| GTP-binding protein TypA/BipA [Escherichia coli KTE90]
gi|433200652|ref|ZP_20384531.1| GTP-binding protein typA/BipA [Escherichia coli KTE94]
gi|433205624|ref|ZP_20389363.1| GTP-binding protein TypA/BipA [Escherichia coli KTE95]
gi|433210041|ref|ZP_20393700.1| GTP-binding protein TypA/BipA [Escherichia coli KTE97]
gi|433214920|ref|ZP_20398490.1| GTP-binding protein TypA/BipA [Escherichia coli KTE99]
gi|433326830|ref|ZP_20403518.1| GTP-binding protein [Escherichia coli J96]
gi|442594965|ref|ZP_21012833.1| GTP-binding protein TypA/BipA [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|442598559|ref|ZP_21016319.1| GTP-binding protein TypA/BipA [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|442607176|ref|ZP_21021965.1| GTP-binding protein TypA/BipA [Escherichia coli Nissle 1917]
gi|443615349|ref|YP_007379205.1| GTP-binding protein [Escherichia coli APEC O78]
gi|444927613|ref|ZP_21246865.1| GTP-binding protein TypA/BipA [Escherichia coli 09BKT078844]
gi|444933222|ref|ZP_21252217.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0814]
gi|444938769|ref|ZP_21257488.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0815]
gi|444944340|ref|ZP_21262812.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0816]
gi|444949778|ref|ZP_21268058.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0839]
gi|444955429|ref|ZP_21273482.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0848]
gi|444960795|ref|ZP_21278605.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1753]
gi|444966028|ref|ZP_21283578.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1775]
gi|444972057|ref|ZP_21289384.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1793]
gi|444977345|ref|ZP_21294409.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1805]
gi|444982727|ref|ZP_21299621.1| GTP-binding protein TypA/BipA [Escherichia coli ATCC 700728]
gi|444988097|ref|ZP_21304862.1| GTP-binding protein TypA/BipA [Escherichia coli PA11]
gi|444993475|ref|ZP_21310104.1| GTP-binding protein TypA/BipA [Escherichia coli PA19]
gi|444998653|ref|ZP_21315141.1| GTP-binding protein TypA/BipA [Escherichia coli PA13]
gi|445004198|ref|ZP_21320576.1| GTP-binding protein TypA/BipA [Escherichia coli PA2]
gi|445009618|ref|ZP_21325835.1| GTP-binding protein TypA/BipA [Escherichia coli PA47]
gi|445014696|ref|ZP_21330789.1| GTP-binding protein TypA/BipA [Escherichia coli PA48]
gi|445020617|ref|ZP_21336570.1| GTP-binding protein TypA/BipA [Escherichia coli PA8]
gi|445026027|ref|ZP_21341838.1| GTP-binding protein TypA/BipA [Escherichia coli 7.1982]
gi|445031434|ref|ZP_21347088.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1781]
gi|445036905|ref|ZP_21352419.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1762]
gi|445042536|ref|ZP_21357896.1| GTP-binding protein TypA/BipA [Escherichia coli PA35]
gi|445047740|ref|ZP_21362976.1| GTP-binding protein TypA/BipA [Escherichia coli 3.4880]
gi|445053322|ref|ZP_21368325.1| GTP-binding protein TypA/BipA [Escherichia coli 95.0083]
gi|445056344|ref|ZP_21371244.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0670]
gi|450195828|ref|ZP_21892671.1| GTP-binding protein [Escherichia coli SEPT362]
gi|450227611|ref|ZP_21897584.1| GTP-binding protein [Escherichia coli O08]
gi|450253068|ref|ZP_21902341.1| GTP-binding protein [Escherichia coli S17]
gi|452969528|ref|ZP_21967755.1| GTP-binding protein TypA/BipA [Escherichia coli O157:H7 str. EC4009]
gi|54042068|sp|P32132.2|TYPA_ECOLI RecName: Full=GTP-binding protein TypA/BipA; AltName: Full=Tyrosine
phosphorylated protein A
gi|61248986|sp|P0A3B1.1|TYPA_ECOL6 RecName: Full=GTP-binding protein TypA/BipA; AltName: Full=Tyrosine
phosphorylated protein A
gi|61248988|sp|P0A3B2.1|TYPA_ECO27 RecName: Full=GTP-binding protein TypA/BipA; AltName: Full=Tyrosine
phosphorylated protein A
gi|61248990|sp|P0A3B3.1|TYPA_ECO57 RecName: Full=GTP-binding protein TypA/BipA; AltName: Full=Tyrosine
phosphorylated protein A
gi|61248993|sp|P0A3B4.1|TYPA_SHIFL RecName: Full=GTP-binding protein TypA/BipA; AltName: Full=Tyrosine
phosphorylated protein A
gi|12518753|gb|AAG59060.1|AE005618_1 putative GTP-binding factor [Escherichia coli O157:H7 str. EDL933]
gi|26111066|gb|AAN83249.1|AE016770_49 GTP-binding protein typA/BipA [Escherichia coli CFT073]
gi|12053841|emb|CAC20136.1| BipA protein [Escherichia coli]
gi|13364269|dbj|BAB38216.1| putative GTP-binding factor [Escherichia coli O157:H7 str. Sakai]
gi|24054436|gb|AAN45376.1| putative GTP-binding factor [Shigella flexneri 2a str. 301]
gi|48994988|gb|AAT48232.1| GTP-binding protein [Escherichia coli str. K-12 substr. MG1655]
gi|81243103|gb|ABB63813.1| putative GTP-binding factor [Shigella dysenteriae Sd197]
gi|85676188|dbj|BAE77438.1| GTP-binding protein [Escherichia coli str. K12 substr. W3110]
gi|91074991|gb|ABE09872.1| putative GTP-binding factor [Escherichia coli UTI89]
gi|110345803|gb|ABG72040.1| GTP-binding protein TypA/BipA [Escherichia coli 536]
gi|115515268|gb|ABJ03343.1| GTP-binding protein [Escherichia coli APEC O1]
gi|157069023|gb|ABV08278.1| GTP-binding protein TypA [Escherichia coli HS]
gi|157079204|gb|ABV18912.1| GTP-binding protein TypA [Escherichia coli E24377A]
gi|169757043|gb|ACA79742.1| GTP-binding protein TypA [Escherichia coli ATCC 8739]
gi|169891178|gb|ACB04885.1| GTP-binding protein [Escherichia coli str. K-12 substr. DH10B]
gi|170521357|gb|ACB19535.1| GTP-binding protein TypA [Escherichia coli SMS-3-5]
gi|187769216|gb|EDU33060.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4196]
gi|188016741|gb|EDU54863.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4113]
gi|188491432|gb|EDU66535.1| GTP-binding protein TypA [Escherichia coli 53638]
gi|189001563|gb|EDU70549.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4076]
gi|189357181|gb|EDU75600.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4401]
gi|189362590|gb|EDU81009.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4486]
gi|189367898|gb|EDU86314.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4501]
gi|189373257|gb|EDU91673.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC869]
gi|189378025|gb|EDU96441.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC508]
gi|190903544|gb|EDV63262.1| GTP-binding protein TypA [Escherichia coli B7A]
gi|190905857|gb|EDV65476.1| GTP-binding protein TypA [Escherichia coli F11]
gi|192929361|gb|EDV82969.1| GTP-binding protein TypA [Escherichia coli E22]
gi|192958618|gb|EDV89056.1| GTP-binding protein TypA [Escherichia coli E110019]
gi|194413253|gb|EDX29538.1| GTP-binding protein TypA [Escherichia coli B171]
gi|208729123|gb|EDZ78724.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4206]
gi|208734610|gb|EDZ83297.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4045]
gi|208739208|gb|EDZ86890.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4042]
gi|209159566|gb|ACI36999.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. EC4115]
gi|209752768|gb|ACI74691.1| putative transcriptional regulator [Escherichia coli]
gi|209752770|gb|ACI74692.1| putative transcriptional regulator [Escherichia coli]
gi|209752772|gb|ACI74693.1| putative transcriptional regulator [Escherichia coli]
gi|209752774|gb|ACI74694.1| putative transcriptional regulator [Escherichia coli]
gi|209752776|gb|ACI74695.1| putative transcriptional regulator [Escherichia coli]
gi|209914604|dbj|BAG79678.1| GTP-binding elongation factor [Escherichia coli SE11]
gi|215267276|emb|CAS11725.1| GTP-binding protein [Escherichia coli O127:H6 str. E2348/69]
gi|217321483|gb|EEC29907.1| GTP-binding protein TypA [Escherichia coli O157:H7 str. TW14588]
gi|218354317|emb|CAV01032.1| GTP-binding protein [Escherichia coli 55989]
gi|218358681|emb|CAQ91335.1| GTP-binding protein [Escherichia fergusonii ATCC 35469]
gi|218363200|emb|CAR00842.1| GTP-binding protein [Escherichia coli IAI1]
gi|218367715|emb|CAR05504.1| GTP-binding protein [Escherichia coli S88]
gi|218371416|emb|CAR19249.1| GTP-binding protein [Escherichia coli IAI39]
gi|218429722|emb|CAR10683.2| GTP-binding protein [Escherichia coli ED1a]
gi|218434594|emb|CAR15523.1| GTP-binding protein [Escherichia coli UMN026]
gi|222035583|emb|CAP78328.1| GTP-binding protein typA/bipA [Escherichia coli LF82]
gi|226902840|gb|EEH89099.1| GTP-binding protein TypA/BipA [Escherichia sp. 3_2_53FAA]
gi|227837650|gb|EEJ48116.1| GTP-binding protein [Escherichia coli 83972]
gi|238861393|gb|ACR63391.1| GTP-binding protein [Escherichia coli BW2952]
gi|242379408|emb|CAQ34222.1| protein possibly involved in ribosome structure or function
[Escherichia coli BL21(DE3)]
gi|253326537|gb|ACT31139.1| GTP-binding protein TypA [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975723|gb|ACT41394.1| GTP-binding protein [Escherichia coli B str. REL606]
gi|253979879|gb|ACT45549.1| GTP-binding protein [Escherichia coli BL21(DE3)]
gi|254595264|gb|ACT74625.1| GTP-binding protein [Escherichia coli O157:H7 str. TW14359]
gi|257756380|dbj|BAI27882.1| GTP-binding protein BipA [Escherichia coli O26:H11 str. 11368]
gi|257761508|dbj|BAI33005.1| GTP-binding protein BipA [Escherichia coli O103:H2 str. 12009]
gi|257766943|dbj|BAI38438.1| GTP-binding protein BipA [Escherichia coli O111:H- str. 11128]
gi|260451293|gb|ACX41715.1| GTP-binding protein TypA [Escherichia coli DH1]
gi|281180934|dbj|BAI57264.1| GTP-binding elongation factor [Escherichia coli SE15]
gi|281603259|gb|ADA76243.1| GTP-binding protein typA/bipA [Shigella flexneri 2002017]
gi|284923972|emb|CBG37071.1| putative lipopolysaccharide core biosynthesis GTP-binding protein
[Escherichia coli 042]
gi|290765154|gb|ADD59115.1| GTP-binding protein typA/bipA [Escherichia coli O55:H7 str. CB9615]
gi|291321393|gb|EFE60832.1| GTP-binding protein TypA/BipA [Escherichia coli B088]
gi|291425407|gb|EFE98446.1| GTPase [Escherichia coli FVEC1412]
gi|291430852|gb|EFF03848.1| GTP-binding protein TypA/BipA [Escherichia coli B185]
gi|291468053|gb|EFF10551.1| GTP-binding protein TypA/BipA [Escherichia coli B354]
gi|294490975|gb|ADE89731.1| GTP-binding protein TypA [Escherichia coli IHE3034]
gi|298276267|gb|EFI17787.1| GTP-binding protein typA/bipA [Escherichia coli FVEC1302]
gi|299878996|gb|EFI87207.1| GTP-binding protein TypA/BipA [Escherichia coli MS 196-1]
gi|300301379|gb|EFJ57764.1| GTP-binding protein TypA/BipA [Escherichia coli MS 185-1]
gi|300315948|gb|EFJ65732.1| GTP-binding protein TypA/BipA [Escherichia coli MS 175-1]
gi|300359267|gb|EFJ75137.1| GTP-binding protein TypA/BipA [Escherichia coli MS 198-1]
gi|300396883|gb|EFJ80421.1| GTP-binding protein TypA/BipA [Escherichia coli MS 69-1]
gi|300401991|gb|EFJ85529.1| GTP-binding protein TypA/BipA [Escherichia coli MS 84-1]
gi|300410101|gb|EFJ93639.1| GTP-binding protein TypA/BipA [Escherichia coli MS 45-1]
gi|300413836|gb|EFJ97146.1| GTP-binding protein TypA/BipA [Escherichia coli MS 115-1]
gi|300417995|gb|EFK01306.1| GTP-binding protein TypA/BipA [Escherichia coli MS 182-1]
gi|300452290|gb|EFK15910.1| GTP-binding protein TypA/BipA [Escherichia coli MS 116-1]
gi|300457829|gb|EFK21322.1| GTP-binding protein TypA/BipA [Escherichia coli MS 21-1]
gi|300460535|gb|EFK24028.1| GTP-binding protein TypA/BipA [Escherichia coli MS 187-1]
gi|300523755|gb|EFK44824.1| GTP-binding protein TypA/BipA [Escherichia coli MS 119-7]
gi|300528137|gb|EFK49199.1| GTP-binding protein TypA/BipA [Escherichia coli MS 107-1]
gi|300841296|gb|EFK69056.1| GTP-binding protein TypA/BipA [Escherichia coli MS 124-1]
gi|300845325|gb|EFK73085.1| GTP-binding protein TypA/BipA [Escherichia coli MS 78-1]
gi|301073491|gb|EFK88297.1| GTP-binding protein TypA/BipA [Escherichia coli MS 146-1]
gi|305852860|gb|EFM53307.1| GTP-binding protein [Escherichia coli NC101]
gi|306906324|gb|EFN36840.1| GTP-binding protein TypA [Escherichia coli W]
gi|307556014|gb|ADN48789.1| putative GTP-binding protein TypA/BipA [Escherichia coli ABU 83972]
gi|307628949|gb|ADN73253.1| GTP-binding protein [Escherichia coli UM146]
gi|308118576|gb|EFO55838.1| GTP-binding protein TypA/BipA [Escherichia coli MS 145-7]
gi|308928362|gb|EFP73823.1| GTP-binding protein TypA/BipA [Shigella dysenteriae 1617]
gi|310334219|gb|EFQ00424.1| GTP-binding protein TypA/BipA [Escherichia coli 1827-70]
gi|312285932|gb|EFR13850.1| GTP-binding protein TypA/BipA [Escherichia coli 2362-75]
gi|312948442|gb|ADR29269.1| GTP-binding protein [Escherichia coli O83:H1 str. NRG 857C]
gi|313647090|gb|EFS11545.1| GTP-binding protein TypA/BipA [Shigella flexneri 2a str. 2457T]
gi|315063158|gb|ADT77485.1| GTP-binding protein [Escherichia coli W]
gi|315138439|dbj|BAJ45598.1| GTP-binding protein typA/bipA [Escherichia coli DH1]
gi|315254237|gb|EFU34205.1| GTP-binding protein TypA/BipA [Escherichia coli MS 85-1]
gi|315289569|gb|EFU48962.1| GTP-binding protein TypA/BipA [Escherichia coli MS 110-3]
gi|315292788|gb|EFU52140.1| GTP-binding protein TypA/BipA [Escherichia coli MS 153-1]
gi|315300258|gb|EFU59495.1| GTP-binding protein TypA/BipA [Escherichia coli MS 16-3]
gi|315618761|gb|EFU99345.1| GTP-binding protein TypA/BipA [Escherichia coli 3431]
gi|320182143|gb|EFW57046.1| GTP-binding protein TypA/BipA [Shigella boydii ATCC 9905]
gi|320191038|gb|EFW65688.1| GTP-binding protein TypA/BipA [Escherichia coli O157:H7 str. EC1212]
gi|320196905|gb|EFW71527.1| GTP-binding protein TypA/BipA [Escherichia coli WV_060327]
gi|320198928|gb|EFW73526.1| GTP-binding protein TypA/BipA [Escherichia coli EC4100B]
gi|320639209|gb|EFX08836.1| GTP-binding protein [Escherichia coli O157:H7 str. G5101]
gi|320644597|gb|EFX13651.1| GTP-binding protein [Escherichia coli O157:H- str. 493-89]
gi|320649921|gb|EFX18429.1| GTP-binding protein [Escherichia coli O157:H- str. H 2687]
gi|320655228|gb|EFX23174.1| GTP-binding protein [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320660855|gb|EFX28301.1| GTP-binding protein [Escherichia coli O55:H7 str. USDA 5905]
gi|320666014|gb|EFX33033.1| GTP-binding protein [Escherichia coli O157:H7 str. LSU-61]
gi|323155097|gb|EFZ41285.1| GTP-binding protein TypA/BipA [Escherichia coli EPECa14]
gi|323161067|gb|EFZ46985.1| GTP-binding protein TypA/BipA [Escherichia coli E128010]
gi|323174263|gb|EFZ59890.1| GTP-binding protein TypA/BipA [Escherichia coli LT-68]
gi|323177881|gb|EFZ63465.1| GTP-binding protein TypA/BipA [Escherichia coli OK1180]
gi|323182389|gb|EFZ67796.1| GTP-binding protein TypA/BipA [Escherichia coli OK1357]
gi|323189704|gb|EFZ74983.1| GTP-binding protein TypA/BipA [Escherichia coli RN587/1]
gi|323380778|gb|ADX53046.1| GTP-binding protein TypA [Escherichia coli KO11FL]
gi|323939091|gb|EGB35307.1| GTP-binding protein TypA/BipA [Escherichia coli E482]
gi|323943766|gb|EGB39863.1| GTP-binding protein TypA/BipA [Escherichia coli H120]
gi|323949365|gb|EGB45254.1| GTP-binding protein TypA/BipA [Escherichia coli H252]
gi|323954353|gb|EGB50138.1| GTP-binding protein TypA/BipA [Escherichia coli H263]
gi|323959362|gb|EGB55023.1| GTP-binding protein TypA/BipA [Escherichia coli H489]
gi|323964218|gb|EGB59701.1| GTP-binding protein TypA/BipA [Escherichia coli M863]
gi|323974273|gb|EGB69402.1| GTP-binding protein TypA/BipA [Escherichia coli TW10509]
gi|324006858|gb|EGB76077.1| GTP-binding protein TypA/BipA [Escherichia coli MS 57-2]
gi|324012572|gb|EGB81791.1| GTP-binding protein TypA/BipA [Escherichia coli MS 60-1]
gi|324019787|gb|EGB89006.1| GTP-binding protein TypA/BipA [Escherichia coli MS 117-3]
gi|324111507|gb|EGC05488.1| GTP-binding protein TypA/BipA [Escherichia fergusonii B253]
gi|324115635|gb|EGC09573.1| GTP-binding protein TypA/BipA [Escherichia coli E1167]
gi|325499421|gb|EGC97280.1| GTP-binding protein [Escherichia fergusonii ECD227]
gi|326338125|gb|EGD61955.1| GTP-binding protein TypA/BipA [Escherichia coli O157:H7 str. 1044]
gi|326342580|gb|EGD66353.1| GTP-binding protein TypA/BipA [Escherichia coli O157:H7 str. 1125]
gi|327250500|gb|EGE62208.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_7v]
gi|330908190|gb|EGH36709.1| GTP-binding protein TypA/BipA [Escherichia coli AA86]
gi|331036064|gb|EGI08300.1| GTP-binding protein TypA/BipA [Escherichia coli H736]
gi|331041350|gb|EGI13500.1| GTP-binding protein TypA/BipA [Escherichia coli M605]
gi|331046656|gb|EGI18741.1| GTP-binding protein TypA/BipA [Escherichia coli M718]
gi|331052372|gb|EGI24409.1| GTP-binding protein TypA/BipA [Escherichia coli TA206]
gi|331057206|gb|EGI29196.1| GTP-binding protein TypA/BipA [Escherichia coli TA143]
gi|331061970|gb|EGI33893.1| GTP-binding protein TypA/BipA [Escherichia coli TA271]
gi|331067390|gb|EGI38795.1| GTP-binding protein TypA/BipA [Escherichia coli TA280]
gi|331072306|gb|EGI43639.1| GTP-binding protein TypA/BipA [Escherichia coli H591]
gi|331077080|gb|EGI48295.1| GTP-binding protein TypA/BipA [Escherichia coli H299]
gi|332085143|gb|EGI90321.1| GTP-binding protein TypA/BipA [Shigella dysenteriae 155-74]
gi|332105101|gb|EGJ08447.1| GTP-binding protein [Shigella sp. D9]
gi|332345863|gb|AEE59197.1| GTP-binding protein TypA [Escherichia coli UMNK88]
gi|332751490|gb|EGJ81891.1| GTP-binding protein TypA/BipA [Shigella flexneri K-671]
gi|332751653|gb|EGJ82052.1| GTP-binding protein TypA/BipA [Shigella flexneri 4343-70]
gi|332764605|gb|EGJ94837.1| GTP-binding protein TypA/BipA [Shigella flexneri 2930-71]
gi|332997581|gb|EGK17196.1| GTP-binding protein TypA/BipA [Shigella flexneri VA-6]
gi|332998498|gb|EGK18096.1| GTP-binding protein TypA/BipA [Shigella flexneri K-272]
gi|332998552|gb|EGK18149.1| GTP-binding protein TypA/BipA [Shigella flexneri K-218]
gi|333013908|gb|EGK33270.1| GTP-binding protein TypA/BipA [Shigella flexneri K-304]
gi|333013993|gb|EGK33354.1| GTP-binding protein TypA/BipA [Shigella flexneri K-227]
gi|333972009|gb|AEG38814.1| GTP-binding protein [Escherichia coli NA114]
gi|335573628|gb|EGM59979.1| GTP-binding protein TypA/BipA [Shigella flexneri J1713]
gi|338767843|gb|EGP22650.1| GTP-binding elongation factor family protein [Escherichia coli
PCN033]
gi|339417597|gb|AEJ59269.1| GTP-binding protein TypA/BipA [Escherichia coli UMNF18]
gi|340731877|gb|EGR61016.1| GTP-binding protein [Escherichia coli O104:H4 str. 01-09591]
gi|340737816|gb|EGR72070.1| GTP-binding protein [Escherichia coli O104:H4 str. LB226692]
gi|341921063|gb|EGT70666.1| typA [Escherichia coli O104:H4 str. C227-11]
gi|342363362|gb|EGU27471.1| GTP-binding protein [Escherichia coli XH140A]
gi|342928551|gb|EGU97273.1| GTP-binding protein TypA/BipA [Escherichia coli MS 79-10]
gi|344193560|gb|EGV47640.1| GTP-binding protein [Escherichia coli XH001]
gi|345330634|gb|EGW63099.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_C165-02]
gi|345331446|gb|EGW63906.1| GTP-binding protein TypA/BipA [Escherichia coli 2534-86]
gi|345333518|gb|EGW65968.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_B2F1]
gi|345348803|gb|EGW81096.1| GTP-binding protein TypA/BipA [Escherichia coli 3030-1]
gi|345353001|gb|EGW85238.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_DG131-3]
gi|345357430|gb|EGW89625.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_EH250]
gi|345369001|gb|EGX00990.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_MHI813]
gi|345369295|gb|EGX01282.1| GTP-binding protein TypA/BipA [Escherichia coli G58-1]
gi|345371350|gb|EGX03320.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_H.1.8]
gi|345384649|gb|EGX14510.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_S1191]
gi|345389408|gb|EGX19213.1| GTP-binding protein TypA/BipA [Escherichia coli TX1999]
gi|349740512|gb|AEQ15218.1| GTP-binding protein [Escherichia coli O7:K1 str. CE10]
gi|354856882|gb|EHF17339.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. C236-11]
gi|354861199|gb|EHF21639.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str. C227-11]
gi|354861491|gb|EHF21930.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str. 04-8351]
gi|354869905|gb|EHF30311.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 09-7901]
gi|354875834|gb|EHF36197.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-3677]
gi|354885113|gb|EHF45421.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4404]
gi|354888422|gb|EHF48679.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str. 11-4522]
gi|354891940|gb|EHF52156.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4623]
gi|354903973|gb|EHF64069.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4632
C1]
gi|354907500|gb|EHF67560.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4632
C2]
gi|354909507|gb|EHF69538.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4632
C3]
gi|354911784|gb|EHF71787.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str. 11-4632
C4]
gi|354919973|gb|EHF79910.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str. 11-4632
C5]
gi|355422736|gb|AER86933.1| GTP-binding protein [Escherichia coli str. 'clone D i2']
gi|355427656|gb|AER91852.1| GTP-binding protein [Escherichia coli str. 'clone D i14']
gi|359333995|dbj|BAL40442.1| GTP-binding protein [Escherichia coli str. K-12 substr. MDS42]
gi|371591676|gb|EHN80619.1| GTP-binding protein typA/BipA [Escherichia coli H494]
gi|371594302|gb|EHN83171.1| GTP-binding protein typA/BipA [Escherichia coli TA124]
gi|371603605|gb|EHN92256.1| GTP-binding protein TypA/BipA [Escherichia coli H397]
gi|371612397|gb|EHO00908.1| GTP-binding protein TypA/BipA [Escherichia coli E101]
gi|371615792|gb|EHO04178.1| GTP-binding protein TypA/BipA [Escherichia coli B093]
gi|373244183|gb|EHP63673.1| GTP-binding protein TypA/BipA [Escherichia coli 4_1_47FAA]
gi|374361309|gb|AEZ43016.1| GTP-binding protein [Escherichia coli O55:H7 str. RM12579]
gi|375322090|gb|EHS67870.1| GTP-binding protein [Escherichia coli O157:H43 str. T22]
gi|377838672|gb|EHU03782.1| GTP-binding protein TypA/BipA [Escherichia coli DEC1C]
gi|377841520|gb|EHU06585.1| GTP-binding protein TypA/BipA [Escherichia coli DEC1B]
gi|377852596|gb|EHU17512.1| GTP-binding protein TypA/BipA [Escherichia coli DEC1D]
gi|377855687|gb|EHU20552.1| GTP-binding protein TypA/BipA [Escherichia coli DEC1E]
gi|377857535|gb|EHU22384.1| GTP-binding protein TypA/BipA [Escherichia coli DEC2A]
gi|377870024|gb|EHU34718.1| GTP-binding protein TypA/BipA [Escherichia coli DEC2B]
gi|377872004|gb|EHU36658.1| GTP-binding protein TypA/BipA [Escherichia coli DEC2C]
gi|377873585|gb|EHU38218.1| GTP-binding protein TypA/BipA [Escherichia coli DEC2D]
gi|377885563|gb|EHU50057.1| GTP-binding protein TypA/BipA [Escherichia coli DEC2E]
gi|377888879|gb|EHU53349.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3A]
gi|377888954|gb|EHU53422.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3B]
gi|377901743|gb|EHU66057.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3C]
gi|377905307|gb|EHU69578.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3D]
gi|377906194|gb|EHU70443.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3E]
gi|377916836|gb|EHU80910.1| GTP-binding protein TypA/BipA [Escherichia coli DEC3F]
gi|377922824|gb|EHU86799.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4A]
gi|377926438|gb|EHU90372.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4B]
gi|377937092|gb|EHV00879.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4D]
gi|377937650|gb|EHV01426.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4C]
gi|377943535|gb|EHV07245.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4E]
gi|377953591|gb|EHV17160.1| GTP-binding protein TypA/BipA [Escherichia coli DEC4F]
gi|377956914|gb|EHV20453.1| GTP-binding protein TypA/BipA [Escherichia coli DEC5A]
gi|377961438|gb|EHV24906.1| GTP-binding protein TypA/BipA [Escherichia coli DEC5B]
gi|377969190|gb|EHV32570.1| GTP-binding protein TypA/BipA [Escherichia coli DEC5C]
gi|377969849|gb|EHV33223.1| GTP-binding protein TypA/BipA [Escherichia coli DEC5D]
gi|377980090|gb|EHV43358.1| GTP-binding protein TypA/BipA [Escherichia coli DEC5E]
gi|377988168|gb|EHV51347.1| GTP-binding protein TypA/BipA [Escherichia coli DEC6B]
gi|377988828|gb|EHV51999.1| GTP-binding protein TypA/BipA [Escherichia coli DEC6A]
gi|377991829|gb|EHV54978.1| GTP-binding protein TypA/BipA [Escherichia coli DEC6C]
gi|378003455|gb|EHV66497.1| GTP-binding protein TypA/BipA [Escherichia coli DEC6D]
gi|378005966|gb|EHV68957.1| GTP-binding protein TypA/BipA [Escherichia coli DEC6E]
gi|378009945|gb|EHV72893.1| GTP-binding protein TypA/BipA [Escherichia coli DEC7A]
gi|378020787|gb|EHV83519.1| GTP-binding protein TypA/BipA [Escherichia coli DEC7C]
gi|378023779|gb|EHV86448.1| GTP-binding protein TypA/BipA [Escherichia coli DEC7D]
gi|378028315|gb|EHV90934.1| GTP-binding protein TypA/BipA [Escherichia coli DEC7B]
gi|378034361|gb|EHV96926.1| GTP-binding protein TypA/BipA [Escherichia coli DEC7E]
gi|378042611|gb|EHW05058.1| GTP-binding protein TypA/BipA [Escherichia coli DEC8A]
gi|378043073|gb|EHW05511.1| GTP-binding protein TypA/BipA [Escherichia coli DEC8B]
gi|378047866|gb|EHW10223.1| GTP-binding protein TypA/BipA [Escherichia coli DEC8C]
gi|378057016|gb|EHW19252.1| GTP-binding protein TypA/BipA [Escherichia coli DEC8D]
gi|378060507|gb|EHW22697.1| GTP-binding protein TypA/BipA [Escherichia coli DEC8E]
gi|378068583|gb|EHW30681.1| GTP-binding protein TypA/BipA [Escherichia coli DEC9A]
gi|378073065|gb|EHW35119.1| GTP-binding protein TypA/BipA [Escherichia coli DEC9B]
gi|378079916|gb|EHW41884.1| GTP-binding protein TypA/BipA [Escherichia coli DEC9C]
gi|378086309|gb|EHW48187.1| GTP-binding protein TypA/BipA [Escherichia coli DEC9D]
gi|378089632|gb|EHW51474.1| GTP-binding protein TypA/BipA [Escherichia coli DEC9E]
gi|378097202|gb|EHW58961.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10A]
gi|378102601|gb|EHW64277.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10B]
gi|378107121|gb|EHW68743.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10C]
gi|378113218|gb|EHW74789.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10D]
gi|378124338|gb|EHW85747.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10E]
gi|378124378|gb|EHW85786.1| GTP-binding protein TypA/BipA [Escherichia coli DEC11A]
gi|378125451|gb|EHW86851.1| GTP-binding protein TypA/BipA [Escherichia coli DEC10F]
gi|378137853|gb|EHW99115.1| GTP-binding protein TypA/BipA [Escherichia coli DEC11B]
gi|378143868|gb|EHX05049.1| GTP-binding protein TypA/BipA [Escherichia coli DEC11D]
gi|378145667|gb|EHX06824.1| GTP-binding protein TypA/BipA [Escherichia coli DEC11C]
gi|378154422|gb|EHX15496.1| GTP-binding protein TypA/BipA [Escherichia coli DEC11E]
gi|378161840|gb|EHX22814.1| GTP-binding protein TypA/BipA [Escherichia coli DEC12B]
gi|378164390|gb|EHX25335.1| GTP-binding protein TypA/BipA [Escherichia coli DEC12A]
gi|378165185|gb|EHX26122.1| GTP-binding protein TypA/BipA [Escherichia coli DEC12C]
gi|378179468|gb|EHX40194.1| GTP-binding protein TypA/BipA [Escherichia coli DEC12D]
gi|378182048|gb|EHX42703.1| GTP-binding protein TypA/BipA [Escherichia coli DEC13A]
gi|378182129|gb|EHX42783.1| GTP-binding protein TypA/BipA [Escherichia coli DEC12E]
gi|378195306|gb|EHX55805.1| GTP-binding protein TypA/BipA [Escherichia coli DEC13C]
gi|378195448|gb|EHX55946.1| GTP-binding protein TypA/BipA [Escherichia coli DEC13B]
gi|378197878|gb|EHX58353.1| GTP-binding protein TypA/BipA [Escherichia coli DEC13D]
gi|378209403|gb|EHX69776.1| GTP-binding protein TypA/BipA [Escherichia coli DEC13E]
gi|378212863|gb|EHX73183.1| GTP-binding protein TypA/BipA [Escherichia coli DEC14A]
gi|378214589|gb|EHX74895.1| GTP-binding protein TypA/BipA [Escherichia coli DEC14B]
gi|378223875|gb|EHX84085.1| GTP-binding protein TypA/BipA [Escherichia coli DEC14C]
gi|378227187|gb|EHX87361.1| GTP-binding protein TypA/BipA [Escherichia coli DEC14D]
gi|378234194|gb|EHX94273.1| GTP-binding protein TypA/BipA [Escherichia coli DEC15A]
gi|378239759|gb|EHX99738.1| GTP-binding protein TypA/BipA [Escherichia coli DEC15B]
gi|378242427|gb|EHY02380.1| GTP-binding protein TypA/BipA [Escherichia coli DEC15C]
gi|378250307|gb|EHY10212.1| GTP-binding protein TypA/BipA [Escherichia coli DEC15D]
gi|378254992|gb|EHY14851.1| GTP-binding protein TypA/BipA [Escherichia coli DEC15E]
gi|380346100|gb|EIA34401.1| GTP-binding protein [Escherichia coli SCI-07]
gi|383390900|gb|AFH15858.1| GTP-binding protein [Escherichia coli KO11FL]
gi|383407467|gb|AFH13710.1| GTP-binding protein [Escherichia coli W]
gi|385155221|gb|EIF17226.1| GTP-binding protein [Escherichia coli O32:H37 str. P4]
gi|385708236|gb|EIG45250.1| GTP-binding protein TypA/BipA [Escherichia coli H730]
gi|385709089|gb|EIG46091.1| GTP-binding protein TypA/BipA [Escherichia coli B799]
gi|386120517|gb|EIG69143.1| GTP-binding protein TypA/BipA [Escherichia sp. 4_1_40B]
gi|386139181|gb|EIG80336.1| GTP-binding protein TypA [Escherichia coli 1.2741]
gi|386147942|gb|EIG94381.1| GTP-binding protein TypA [Escherichia coli 97.0246]
gi|386150641|gb|EIH01930.1| GTP-binding protein TypA [Escherichia coli 5.0588]
gi|386155110|gb|EIH11465.1| GTP-binding protein TypA [Escherichia coli 97.0259]
gi|386161422|gb|EIH23225.1| GTP-binding protein TypA [Escherichia coli 1.2264]
gi|386165464|gb|EIH31984.1| GTP-binding protein TypA [Escherichia coli 96.0497]
gi|386174235|gb|EIH46235.1| GTP-binding protein TypA [Escherichia coli 99.0741]
gi|386178064|gb|EIH55543.1| GTP-binding protein TypA [Escherichia coli 3.2608]
gi|386182870|gb|EIH65626.1| GTP-binding protein TypA [Escherichia coli 93.0624]
gi|386186873|gb|EIH75696.1| GTP-binding protein TypA [Escherichia coli 4.0522]
gi|386196827|gb|EIH91040.1| GTP-binding protein TypA [Escherichia coli JB1-95]
gi|386202782|gb|EII01773.1| GTP-binding protein TypA [Escherichia coli 96.154]
gi|386207258|gb|EII11763.1| GTP-binding protein TypA [Escherichia coli 5.0959]
gi|386211942|gb|EII22393.1| GTP-binding protein TypA [Escherichia coli 9.0111]
gi|386220360|gb|EII36824.1| GTP-binding protein TypA [Escherichia coli 4.0967]
gi|386221263|gb|EII43707.1| GTP-binding protein TypA [Escherichia coli 2.3916]
gi|386228512|gb|EII55868.1| GTP-binding protein TypA [Escherichia coli 3.3884]
gi|386234215|gb|EII66193.1| GTP-binding protein TypA [Escherichia coli 2.4168]
gi|386238089|gb|EII75029.1| GTP-binding protein TypA [Escherichia coli 3.2303]
gi|386246430|gb|EII88160.1| GTP-binding protein TypA [Escherichia coli 3003]
gi|386248762|gb|EII94934.1| GTP-binding protein TypA [Escherichia coli TW07793]
gi|386251978|gb|EIJ01670.1| GTP-binding protein TypA [Escherichia coli B41]
gi|386259970|gb|EIJ15444.1| GTP-binding protein TypA [Escherichia coli 900105 (10e)]
gi|386798550|gb|AFJ31584.1| GTP-binding protein [Escherichia coli Xuzhou21]
gi|388334870|gb|EIL01451.1| GTP-binding protein [Escherichia coli O103:H25 str. CVM9340]
gi|388337035|gb|EIL03551.1| GTP-binding protein [Escherichia coli O103:H2 str. CVM9450]
gi|388342254|gb|EIL08301.1| GTP-binding protein [Escherichia coli O111:H11 str. CVM9534]
gi|388349897|gb|EIL15329.1| GTP-binding protein [Escherichia coli O111:H8 str. CVM9570]
gi|388359655|gb|EIL23942.1| GTP-binding protein [Escherichia coli O111:H8 str. CVM9574]
gi|388367439|gb|EIL31120.1| GTP-binding protein [Escherichia coli O111:H11 str. CVM9545]
gi|388368251|gb|EIL31893.1| GTP-binding protein [Escherichia coli O26:H11 str. CVM9942]
gi|388373159|gb|EIL36493.1| GTP-binding protein TypA [Escherichia coli O26:H11 str. CVM10026]
gi|388383187|gb|EIL44974.1| GTP-binding protein [Escherichia coli KD2]
gi|388383721|gb|EIL45470.1| GTP-binding protein [Escherichia coli 541-15]
gi|388392447|gb|EIL53865.1| GTP-binding protein [Escherichia coli KD1]
gi|388406878|gb|EIL67260.1| GTP-binding protein [Escherichia coli 541-1]
gi|388410996|gb|EIL71189.1| GTP-binding protein [Escherichia coli 75]
gi|388419197|gb|EIL78945.1| GTP-binding protein [Escherichia coli HM605]
gi|388420347|gb|EIL80043.1| GTP-binding protein [Escherichia coli 576-1]
gi|388422489|gb|EIL82067.1| GTP-binding protein [Escherichia coli CUMT8]
gi|390636988|gb|EIN16547.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK1996]
gi|390637404|gb|EIN16953.1| GTP-binding protein TypA/BipA [Escherichia coli FDA505]
gi|390638126|gb|EIN17643.1| GTP-binding protein TypA/BipA [Escherichia coli FDA517]
gi|390655673|gb|EIN33592.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK1985]
gi|390656509|gb|EIN34375.1| GTP-binding protein TypA/BipA [Escherichia coli 93-001]
gi|390659023|gb|EIN36792.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK1990]
gi|390673848|gb|EIN50063.1| GTP-binding protein TypA/BipA [Escherichia coli PA3]
gi|390677178|gb|EIN53241.1| GTP-binding protein TypA/BipA [Escherichia coli PA5]
gi|390680561|gb|EIN56393.1| GTP-binding protein TypA/BipA [Escherichia coli PA9]
gi|390691726|gb|EIN66452.1| GTP-binding protein TypA/BipA [Escherichia coli PA10]
gi|390696059|gb|EIN70557.1| GTP-binding protein TypA/BipA [Escherichia coli PA14]
gi|390697264|gb|EIN71688.1| GTP-binding protein TypA/BipA [Escherichia coli PA15]
gi|390711116|gb|EIN84105.1| GTP-binding protein TypA/BipA [Escherichia coli PA22]
gi|390717316|gb|EIN90103.1| GTP-binding protein TypA/BipA [Escherichia coli PA24]
gi|390718012|gb|EIN90777.1| GTP-binding protein TypA/BipA [Escherichia coli PA25]
gi|390736783|gb|EIO08106.1| GTP-binding protein TypA/BipA [Escherichia coli PA31]
gi|390737400|gb|EIO08699.1| GTP-binding protein TypA/BipA [Escherichia coli PA32]
gi|390741010|gb|EIO12109.1| GTP-binding protein TypA/BipA [Escherichia coli PA33]
gi|390758341|gb|EIO27803.1| GTP-binding protein TypA/BipA [Escherichia coli PA39]
gi|390761674|gb|EIO30951.1| GTP-binding protein TypA/BipA [Escherichia coli PA41]
gi|390764726|gb|EIO33925.1| GTP-binding protein TypA/BipA [Escherichia coli PA42]
gi|390783298|gb|EIO50905.1| GTP-binding protein TypA/BipA [Escherichia coli TW06591]
gi|390785415|gb|EIO52958.1| GTP-binding protein TypA/BipA [Escherichia coli TW07945]
gi|390786665|gb|EIO54171.1| GTP-binding protein TypA/BipA [Escherichia coli TW10246]
gi|390792936|gb|EIO60283.1| GTP-binding protein TypA/BipA [Escherichia coli TW11039]
gi|390799927|gb|EIO67050.1| GTP-binding protein TypA/BipA [Escherichia coli TW09098]
gi|390813469|gb|EIO80085.1| GTP-binding protein TypA/BipA [Escherichia coli TW10119]
gi|390821862|gb|EIO88029.1| GTP-binding protein TypA/BipA [Escherichia coli TW09195]
gi|390822346|gb|EIO88473.1| GTP-binding protein TypA/BipA [Escherichia coli EC4203]
gi|390827442|gb|EIO93209.1| GTP-binding protein TypA/BipA [Escherichia coli EC4196]
gi|390840605|gb|EIP04624.1| GTP-binding protein TypA/BipA [Escherichia coli TW14313]
gi|390842604|gb|EIP06445.1| GTP-binding protein TypA/BipA [Escherichia coli TW14301]
gi|390847618|gb|EIP11148.1| GTP-binding protein TypA/BipA [Escherichia coli EC4421]
gi|390858098|gb|EIP20511.1| GTP-binding protein TypA/BipA [Escherichia coli EC4422]
gi|390862382|gb|EIP24570.1| GTP-binding protein TypA/BipA [Escherichia coli EC4013]
gi|390866424|gb|EIP28384.1| GTP-binding protein TypA/BipA [Escherichia coli EC4402]
gi|390874767|gb|EIP35859.1| GTP-binding protein TypA/BipA [Escherichia coli EC4439]
gi|390880078|gb|EIP40785.1| GTP-binding protein TypA/BipA [Escherichia coli EC4436]
gi|390891324|gb|EIP50959.1| GTP-binding protein TypA/BipA [Escherichia coli EC4448]
gi|390897815|gb|EIP57122.1| GTP-binding protein TypA/BipA [Escherichia coli EC1738]
gi|390905720|gb|EIP64650.1| GTP-binding protein TypA/BipA [Escherichia coli EC1734]
gi|390915261|gb|EIP73777.1| GTP-binding protein TypA/BipA [Escherichia coli EC1845]
gi|390915705|gb|EIP74208.1| GTP-binding protein TypA/BipA [Escherichia coli EC1863]
gi|391245442|gb|EIQ04710.1| GTP-binding protein TypA/BipA [Shigella flexneri K-1770]
gi|391258464|gb|EIQ17563.1| GTP-binding protein TypA/BipA [Shigella flexneri K-315]
gi|391263268|gb|EIQ22278.1| GTP-binding protein TypA/BipA [Shigella flexneri K-404]
gi|391265001|gb|EIQ23979.1| GTP-binding protein TypA/BipA [Shigella boydii 965-58]
gi|391277173|gb|EIQ35924.1| GTP-binding protein TypA/BipA [Shigella sonnei 3226-85]
gi|391280370|gb|EIQ39042.1| GTP-binding protein TypA/BipA [Shigella sonnei 3233-85]
gi|391291554|gb|EIQ49946.1| GTP-binding protein TypA/BipA [Shigella sonnei 4822-66]
gi|391301195|gb|EIQ59093.1| GTP-binding protein TypA/BipA [Escherichia coli EPECa12]
gi|391309408|gb|EIQ67078.1| GTP-binding protein TypA/BipA [Escherichia coli EPEC C342-62]
gi|394383843|gb|EJE61426.1| GTP-binding protein [Escherichia coli O111:H8 str. CVM9634]
gi|394384716|gb|EJE62271.1| GTP-binding protein [Escherichia coli O26:H11 str. CVM10224]
gi|394389351|gb|EJE66497.1| GTP-binding protein [Escherichia coli O111:H8 str. CVM9602]
gi|394397963|gb|EJE74185.1| GTP-binding protein [Escherichia coli O111:H11 str. CVM9553]
gi|394400811|gb|EJE76703.1| GTP-binding protein [Escherichia coli O111:H11 str. CVM9455]
gi|394403744|gb|EJE79283.1| GTP-binding protein [Escherichia coli O26:H11 str. CVM10021]
gi|394418404|gb|EJE92080.1| GTP-binding protein [Escherichia coli O26:H11 str. CVM10030]
gi|394421124|gb|EJE94613.1| GTP-binding protein [Escherichia coli O26:H11 str. CVM9952]
gi|397782938|gb|EJK93801.1| GTP-binding protein TypA/BipA [Escherichia coli STEC_O31]
gi|397894974|gb|EJL11410.1| GTP-binding protein TypA/BipA [Shigella sonnei str. Moseley]
gi|406780109|gb|AFS59533.1| GTP-binding protein [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407056698|gb|AFS76749.1| GTP-binding protein [Escherichia coli O104:H4 str. 2011C-3493]
gi|407062908|gb|AFS83955.1| GTP-binding protein [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408063520|gb|EKG98011.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK920]
gi|408064945|gb|EKG99425.1| GTP-binding protein TypA/BipA [Escherichia coli PA34]
gi|408074415|gb|EKH08697.1| GTP-binding protein TypA/BipA [Escherichia coli PA7]
gi|408075086|gb|EKH09329.1| GTP-binding protein TypA/BipA [Escherichia coli FDA506]
gi|408080078|gb|EKH14168.1| GTP-binding protein TypA/BipA [Escherichia coli FDA507]
gi|408088246|gb|EKH21625.1| GTP-binding protein TypA/BipA [Escherichia coli FDA504]
gi|408094425|gb|EKH27447.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK1999]
gi|408100614|gb|EKH33103.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK1997]
gi|408124932|gb|EKH55575.1| GTP-binding protein TypA/BipA [Escherichia coli PA4]
gi|408134644|gb|EKH64464.1| GTP-binding protein TypA/BipA [Escherichia coli PA23]
gi|408136753|gb|EKH66488.1| GTP-binding protein TypA/BipA [Escherichia coli PA49]
gi|408143607|gb|EKH72886.1| GTP-binding protein TypA/BipA [Escherichia coli PA45]
gi|408151988|gb|EKH80442.1| GTP-binding protein TypA/BipA [Escherichia coli TT12B]
gi|408157049|gb|EKH85222.1| GTP-binding protein TypA/BipA [Escherichia coli MA6]
gi|408161166|gb|EKH89140.1| GTP-binding protein TypA/BipA [Escherichia coli 5905]
gi|408170221|gb|EKH97439.1| GTP-binding protein TypA/BipA [Escherichia coli CB7326]
gi|408177154|gb|EKI03973.1| GTP-binding protein TypA/BipA [Escherichia coli EC96038]
gi|408180102|gb|EKI06733.1| GTP-binding protein TypA/BipA [Escherichia coli 5412]
gi|408189512|gb|EKI15229.1| GTP-binding protein TypA/BipA [Escherichia coli TW15901]
gi|408197303|gb|EKI22567.1| GTP-binding protein TypA/BipA [Escherichia coli ARS4.2123]
gi|408197645|gb|EKI22899.1| GTP-binding protein TypA/BipA [Escherichia coli TW00353]
gi|408208655|gb|EKI33287.1| GTP-binding protein TypA/BipA [Escherichia coli 3006]
gi|408210271|gb|EKI34839.1| GTP-binding protein TypA/BipA [Escherichia coli 07798]
gi|408210486|gb|EKI35049.1| GTP-binding protein TypA/BipA [Escherichia coli PA38]
gi|408223403|gb|EKI47176.1| GTP-binding protein TypA/BipA [Escherichia coli EC1735]
gi|408224844|gb|EKI48546.1| GTP-binding protein TypA/BipA [Escherichia coli N1]
gi|408234837|gb|EKI57835.1| GTP-binding protein TypA/BipA [Escherichia coli EC1736]
gi|408237413|gb|EKI60269.1| GTP-binding protein TypA/BipA [Escherichia coli EC1737]
gi|408242762|gb|EKI65316.1| GTP-binding protein TypA/BipA [Escherichia coli EC1846]
gi|408251704|gb|EKI73424.1| GTP-binding protein TypA/BipA [Escherichia coli EC1847]
gi|408255991|gb|EKI77399.1| GTP-binding protein TypA/BipA [Escherichia coli EC1848]
gi|408262684|gb|EKI83603.1| GTP-binding protein TypA/BipA [Escherichia coli EC1849]
gi|408270903|gb|EKI91057.1| GTP-binding protein TypA/BipA [Escherichia coli EC1850]
gi|408274075|gb|EKI94103.1| GTP-binding protein TypA/BipA [Escherichia coli EC1856]
gi|408281986|gb|EKJ01339.1| GTP-binding protein TypA/BipA [Escherichia coli EC1862]
gi|408288293|gb|EKJ07122.1| GTP-binding protein TypA/BipA [Escherichia coli EC1864]
gi|408293008|gb|EKJ11478.1| GTP-binding protein TypA/BipA [Escherichia coli EC1865]
gi|408303075|gb|EKJ20543.1| GTP-binding protein TypA/BipA [Escherichia coli EC1868]
gi|408304373|gb|EKJ21801.1| GTP-binding protein TypA/BipA [Escherichia coli EC1866]
gi|408315695|gb|EKJ31999.1| GTP-binding protein TypA/BipA [Escherichia coli EC1869]
gi|408321166|gb|EKJ37208.1| GTP-binding protein TypA/BipA [Escherichia coli EC1870]
gi|408322954|gb|EKJ38927.1| GTP-binding protein TypA/BipA [Escherichia coli NE098]
gi|408333657|gb|EKJ48603.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK523]
gi|408340369|gb|EKJ54866.1| GTP-binding protein TypA/BipA [Escherichia coli 0.1288]
gi|408341655|gb|EKJ56098.1| GTP-binding protein TypA/BipA [Escherichia coli 0.1304]
gi|408457545|gb|EKJ81340.1| GTP-binding protein [Escherichia coli AD30]
gi|408544675|gb|EKK22124.1| GTP-binding protein TypA/BipA [Escherichia coli 5.2239]
gi|408545071|gb|EKK22511.1| GTP-binding protein TypA/BipA [Escherichia coli 3.4870]
gi|408545652|gb|EKK23078.1| GTP-binding protein TypA/BipA [Escherichia coli 6.0172]
gi|408562773|gb|EKK38925.1| GTP-binding protein TypA/BipA [Escherichia coli 8.0566]
gi|408563290|gb|EKK39427.1| GTP-binding protein TypA/BipA [Escherichia coli 8.0586]
gi|408563876|gb|EKK39997.1| GTP-binding protein TypA/BipA [Escherichia coli 8.0569]
gi|408575547|gb|EKK51205.1| GTP-binding protein TypA/BipA [Escherichia coli 10.0833]
gi|408578286|gb|EKK53805.1| GTP-binding protein TypA/BipA [Escherichia coli 8.2524]
gi|408588197|gb|EKK62785.1| GTP-binding protein TypA/BipA [Escherichia coli 10.0869]
gi|408593146|gb|EKK67474.1| GTP-binding protein TypA/BipA [Escherichia coli 88.0221]
gi|408598796|gb|EKK72737.1| GTP-binding protein TypA/BipA [Escherichia coli 8.0416]
gi|408608540|gb|EKK81930.1| GTP-binding protein TypA/BipA [Escherichia coli 10.0821]
gi|412965245|emb|CCK49176.1| gtp-binding protein typa/bipa [Escherichia coli chi7122]
gi|421935249|gb|EKT92942.1| GTP-binding protein [Escherichia coli O26:H11 str. CFSAN001629]
gi|421944838|gb|EKU02078.1| GTP-binding protein [Escherichia coli O111:H8 str. CFSAN001632]
gi|421947463|gb|EKU04537.1| GTP-binding protein [Escherichia coli O111:H11 str. CFSAN001630]
gi|427200919|gb|EKV71326.1| GTP-binding protein TypA/BipA [Escherichia coli 89.0511]
gi|427201171|gb|EKV71567.1| GTP-binding protein TypA/BipA [Escherichia coli 88.1042]
gi|427204458|gb|EKV74734.1| GTP-binding protein TypA/BipA [Escherichia coli 88.1467]
gi|427217435|gb|EKV86497.1| GTP-binding protein TypA/BipA [Escherichia coli 90.0091]
gi|427221202|gb|EKV90070.1| GTP-binding protein TypA/BipA [Escherichia coli 90.2281]
gi|427224016|gb|EKV92738.1| GTP-binding protein TypA/BipA [Escherichia coli 90.0039]
gi|427237574|gb|EKW05103.1| GTP-binding protein TypA/BipA [Escherichia coli 93.0056]
gi|427237800|gb|EKW05323.1| GTP-binding protein TypA/BipA [Escherichia coli 93.0055]
gi|427242376|gb|EKW09787.1| GTP-binding protein TypA/BipA [Escherichia coli 94.0618]
gi|427255644|gb|EKW21893.1| GTP-binding protein TypA/BipA [Escherichia coli 95.0183]
gi|427257259|gb|EKW23390.1| GTP-binding protein TypA/BipA [Escherichia coli 95.0943]
gi|427257726|gb|EKW23843.1| GTP-binding protein TypA/BipA [Escherichia coli 95.1288]
gi|427272998|gb|EKW37704.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0428]
gi|427274659|gb|EKW39306.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0427]
gi|427280228|gb|EKW44593.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0939]
gi|427288794|gb|EKW52395.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0932]
gi|427295740|gb|EKW58826.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0107]
gi|427297476|gb|EKW60510.1| GTP-binding protein TypA/BipA [Escherichia coli 97.0003]
gi|427307597|gb|EKW70036.1| GTP-binding protein TypA/BipA [Escherichia coli 97.1742]
gi|427310608|gb|EKW72850.1| GTP-binding protein TypA/BipA [Escherichia coli 97.0007]
gi|427315298|gb|EKW77302.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0672]
gi|427324787|gb|EKW86247.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0678]
gi|427325922|gb|EKW87349.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0713]
gi|429251060|gb|EKY35688.1| GTP-binding protein TypA/BipA [Escherichia coli 97.0010]
gi|429354867|gb|EKY91562.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02030]
gi|429355609|gb|EKY92296.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str.
11-02033-1]
gi|429356440|gb|EKY93116.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02092]
gi|429370609|gb|EKZ07173.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02093]
gi|429371069|gb|EKZ07629.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02281]
gi|429375292|gb|EKZ11829.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02318]
gi|429386730|gb|EKZ23176.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-02913]
gi|429389107|gb|EKZ25529.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-03439]
gi|429390216|gb|EKZ26631.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-03943]
gi|429399776|gb|EKZ36095.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
11-04080]
gi|429401703|gb|EKZ38000.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429404306|gb|EKZ40583.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429412563|gb|EKZ48756.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429415283|gb|EKZ51449.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429422799|gb|EKZ58910.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429427380|gb|EKZ63464.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429431640|gb|EKZ67686.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429437911|gb|EKZ73906.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429442260|gb|EKZ78218.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429447431|gb|EKZ83350.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429454119|gb|EKZ89984.1| GTP-binding protein typA/BipA [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429458410|gb|EKZ94235.1| GTP-binding protein TypA/BipA [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430871732|gb|ELB95359.1| GTP-binding protein TypA/BipA [Escherichia coli KTE2]
gi|430872623|gb|ELB96221.1| GTP-binding protein TypA/BipA [Escherichia coli KTE4]
gi|430882800|gb|ELC05870.1| GTP-binding protein typA/BipA [Escherichia coli KTE5]
gi|430895611|gb|ELC17873.1| GTP-binding protein TypA/BipA [Escherichia coli KTE12]
gi|430902787|gb|ELC24591.1| GTP-binding protein TypA/BipA [Escherichia coli KTE15]
gi|430911752|gb|ELC33021.1| GTP-binding protein typA/BipA [Escherichia coli KTE16]
gi|430913391|gb|ELC34513.1| GTP-binding protein TypA/BipA [Escherichia coli KTE21]
gi|430920126|gb|ELC41036.1| GTP-binding protein TypA/BipA [Escherichia coli KTE25]
gi|430922341|gb|ELC43097.1| GTP-binding protein TypA/BipA [Escherichia coli KTE26]
gi|430925765|gb|ELC46367.1| GTP-binding protein TypA/BipA [Escherichia coli KTE28]
gi|430932142|gb|ELC52575.1| GTP-binding protein TypA/BipA [Escherichia coli KTE39]
gi|430935623|gb|ELC55923.1| GTP-binding protein TypA/BipA [Escherichia coli KTE44]
gi|430941343|gb|ELC61496.1| GTP-binding protein TypA/BipA [Escherichia coli KTE178]
gi|430949681|gb|ELC69108.1| GTP-binding protein TypA/BipA [Escherichia coli KTE187]
gi|430950057|gb|ELC69448.1| GTP-binding protein TypA/BipA [Escherichia coli KTE181]
gi|430959565|gb|ELC77882.1| GTP-binding protein typA/BipA [Escherichia coli KTE188]
gi|430961863|gb|ELC79862.1| GTP-binding protein TypA/BipA [Escherichia coli KTE189]
gi|430970247|gb|ELC87319.1| GTP-binding protein TypA/BipA [Escherichia coli KTE191]
gi|430977282|gb|ELC94133.1| GTP-binding protein TypA/BipA [Escherichia coli KTE193]
gi|430978842|gb|ELC95636.1| GTP-binding protein TypA/BipA [Escherichia coli KTE201]
gi|430984940|gb|ELD01550.1| GTP-binding protein TypA/BipA [Escherichia coli KTE204]
gi|430990383|gb|ELD06818.1| GTP-binding protein typA/BipA [Escherichia coli KTE205]
gi|430994993|gb|ELD11301.1| GTP-binding protein TypA/BipA [Escherichia coli KTE206]
gi|431001531|gb|ELD17112.1| GTP-binding protein typA/BipA [Escherichia coli KTE208]
gi|431003017|gb|ELD18504.1| GTP-binding protein TypA/BipA [Escherichia coli KTE210]
gi|431013453|gb|ELD27186.1| GTP-binding protein TypA/BipA [Escherichia coli KTE212]
gi|431016949|gb|ELD30468.1| GTP-binding protein typA/BipA [Escherichia coli KTE213]
gi|431025515|gb|ELD38617.1| GTP-binding protein typA/BipA [Escherichia coli KTE216]
gi|431030763|gb|ELD43769.1| GTP-binding protein TypA/BipA [Escherichia coli KTE214]
gi|431034515|gb|ELD46446.1| GTP-binding protein TypA/BipA [Escherichia coli KTE220]
gi|431037760|gb|ELD48735.1| GTP-binding protein TypA/BipA [Escherichia coli KTE224]
gi|431047145|gb|ELD57151.1| GTP-binding protein TypA/BipA [Escherichia coli KTE230]
gi|431047195|gb|ELD57200.1| GTP-binding protein TypA/BipA [Escherichia coli KTE228]
gi|431059838|gb|ELD69185.1| GTP-binding protein TypA/BipA [Escherichia coli KTE233]
gi|431066399|gb|ELD75028.1| GTP-binding protein TypA/BipA [Escherichia coli KTE235]
gi|431066741|gb|ELD75364.1| GTP-binding protein TypA/BipA [Escherichia coli KTE234]
gi|431070219|gb|ELD78525.1| GTP-binding protein TypA/BipA [Escherichia coli KTE236]
gi|431075329|gb|ELD82851.1| GTP-binding protein TypA/BipA [Escherichia coli KTE237]
gi|431080081|gb|ELD86887.1| GTP-binding protein typA/BipA [Escherichia coli KTE47]
gi|431088074|gb|ELD93979.1| GTP-binding protein TypA/BipA [Escherichia coli KTE49]
gi|431089344|gb|ELD95163.1| GTP-binding protein TypA/BipA [Escherichia coli KTE51]
gi|431096786|gb|ELE02246.1| GTP-binding protein TypA/BipA [Escherichia coli KTE53]
gi|431104035|gb|ELE08642.1| GTP-binding protein TypA/BipA [Escherichia coli KTE55]
gi|431111225|gb|ELE15130.1| GTP-binding protein TypA/BipA [Escherichia coli KTE56]
gi|431114047|gb|ELE17601.1| GTP-binding protein TypA/BipA [Escherichia coli KTE57]
gi|431117259|gb|ELE20521.1| GTP-binding protein TypA/BipA [Escherichia coli KTE58]
gi|431125398|gb|ELE27813.1| GTP-binding protein typA/BipA [Escherichia coli KTE60]
gi|431130210|gb|ELE32319.1| GTP-binding protein TypA/BipA [Escherichia coli KTE62]
gi|431136428|gb|ELE38296.1| GTP-binding protein TypA/BipA [Escherichia coli KTE66]
gi|431143850|gb|ELE45564.1| GTP-binding protein TypA/BipA [Escherichia coli KTE67]
gi|431145813|gb|ELE47418.1| GTP-binding protein TypA/BipA [Escherichia coli KTE72]
gi|431155386|gb|ELE56142.1| GTP-binding protein TypA/BipA [Escherichia coli KTE76]
gi|431159917|gb|ELE60460.1| GTP-binding protein TypA/BipA [Escherichia coli KTE77]
gi|431166630|gb|ELE66937.1| GTP-binding protein TypA/BipA [Escherichia coli KTE80]
gi|431175776|gb|ELE75766.1| GTP-binding protein TypA/BipA [Escherichia coli KTE81]
gi|431176622|gb|ELE76565.1| GTP-binding protein TypA/BipA [Escherichia coli KTE83]
gi|431177269|gb|ELE77201.1| GTP-binding protein TypA/BipA [Escherichia coli KTE86]
gi|431186658|gb|ELE86198.1| GTP-binding protein TypA/BipA [Escherichia coli KTE87]
gi|431187173|gb|ELE86686.1| GTP-binding protein TypA/BipA [Escherichia coli KTE93]
gi|431196553|gb|ELE95479.1| GTP-binding protein TypA/BipA [Escherichia coli KTE111]
gi|431206202|gb|ELF04627.1| GTP-binding protein TypA/BipA [Escherichia coli KTE116]
gi|431207072|gb|ELF05380.1| GTP-binding protein TypA/BipA [Escherichia coli KTE119]
gi|431209712|gb|ELF07783.1| GTP-binding protein typA/BipA [Escherichia coli KTE142]
gi|431216935|gb|ELF14527.1| GTP-binding protein TypA/BipA [Escherichia coli KTE143]
gi|431218798|gb|ELF16230.1| GTP-binding protein TypA/BipA [Escherichia coli KTE156]
gi|431230522|gb|ELF26301.1| GTP-binding protein TypA/BipA [Escherichia coli KTE162]
gi|431234219|gb|ELF29626.1| GTP-binding protein typA/BipA [Escherichia coli KTE161]
gi|431239491|gb|ELF33968.1| GTP-binding protein TypA/BipA [Escherichia coli KTE169]
gi|431239783|gb|ELF34253.1| GTP-binding protein TypA/BipA [Escherichia coli KTE171]
gi|431251147|gb|ELF45165.1| GTP-binding protein typA/BipA [Escherichia coli KTE8]
gi|431254724|gb|ELF47992.1| GTP-binding protein TypA/BipA [Escherichia coli KTE6]
gi|431261660|gb|ELF53685.1| GTP-binding protein TypA/BipA [Escherichia coli KTE17]
gi|431269620|gb|ELF60926.1| GTP-binding protein TypA/BipA [Escherichia coli KTE9]
gi|431270354|gb|ELF61520.1| GTP-binding protein typA/BipA [Escherichia coli KTE45]
gi|431270404|gb|ELF61569.1| GTP-binding protein TypA/BipA [Escherichia coli KTE18]
gi|431280679|gb|ELF71594.1| GTP-binding protein typA/BipA [Escherichia coli KTE23]
gi|431289013|gb|ELF79760.1| GTP-binding protein TypA/BipA [Escherichia coli KTE43]
gi|431289840|gb|ELF80571.1| GTP-binding protein typA/BipA [Escherichia coli KTE42]
gi|431293252|gb|ELF83632.1| GTP-binding protein typA/BipA [Escherichia coli KTE29]
gi|431299089|gb|ELF88665.1| GTP-binding protein TypA/BipA [Escherichia coli KTE22]
gi|431304991|gb|ELF93514.1| GTP-binding protein typA/BipA [Escherichia coli KTE46]
gi|431315059|gb|ELG02987.1| GTP-binding protein TypA/BipA [Escherichia coli KTE48]
gi|431321508|gb|ELG09109.1| GTP-binding protein TypA/BipA [Escherichia coli KTE50]
gi|431323066|gb|ELG10619.1| GTP-binding protein TypA/BipA [Escherichia coli KTE54]
gi|431323671|gb|ELG11143.1| GTP-binding protein TypA/BipA [Escherichia coli KTE59]
gi|431333926|gb|ELG21102.1| GTP-binding protein typA/BipA [Escherichia coli KTE63]
gi|431334509|gb|ELG21667.1| GTP-binding protein TypA/BipA [Escherichia coli KTE65]
gi|431335086|gb|ELG22228.1| GTP-binding protein TypA/BipA [Escherichia coli KTE78]
gi|431347598|gb|ELG34481.1| GTP-binding protein TypA/BipA [Escherichia coli KTE79]
gi|431352281|gb|ELG39059.1| GTP-binding protein TypA/BipA [Escherichia coli KTE91]
gi|431353984|gb|ELG40735.1| GTP-binding protein TypA/BipA [Escherichia coli KTE84]
gi|431359467|gb|ELG46104.1| GTP-binding protein TypA/BipA [Escherichia coli KTE101]
gi|431359701|gb|ELG46327.1| GTP-binding protein TypA/BipA [Escherichia coli KTE115]
gi|431373046|gb|ELG58706.1| GTP-binding protein TypA/BipA [Escherichia coli KTE118]
gi|431377168|gb|ELG62301.1| GTP-binding protein TypA/BipA [Escherichia coli KTE123]
gi|431380863|gb|ELG65499.1| GTP-binding protein TypA/BipA [Escherichia coli KTE136]
gi|431381797|gb|ELG66148.1| GTP-binding protein TypA/BipA [Escherichia coli KTE135]
gi|431384779|gb|ELG68781.1| GTP-binding protein typA/BipA [Escherichia coli KTE140]
gi|431391760|gb|ELG75366.1| GTP-binding protein typA/BipA [Escherichia coli KTE141]
gi|431396621|gb|ELG80098.1| GTP-binding protein typA/BipA [Escherichia coli KTE144]
gi|431400655|gb|ELG84022.1| GTP-binding protein TypA/BipA [Escherichia coli KTE146]
gi|431407291|gb|ELG90503.1| GTP-binding protein TypA/BipA [Escherichia coli KTE147]
gi|431417062|gb|ELG99532.1| GTP-binding protein TypA/BipA [Escherichia coli KTE154]
gi|431421290|gb|ELH03503.1| GTP-binding protein TypA/BipA [Escherichia coli KTE192]
gi|431422959|gb|ELH05089.1| GTP-binding protein TypA/BipA [Escherichia coli KTE158]
gi|431425862|gb|ELH07908.1| GTP-binding protein TypA/BipA [Escherichia coli KTE194]
gi|431429610|gb|ELH11535.1| GTP-binding protein TypA/BipA [Escherichia coli KTE165]
gi|431434112|gb|ELH15764.1| GTP-binding protein typA/BipA [Escherichia coli KTE173]
gi|431435137|gb|ELH16750.1| GTP-binding protein TypA/BipA [Escherichia coli KTE190]
gi|431439294|gb|ELH20629.1| GTP-binding protein TypA/BipA [Escherichia coli KTE175]
gi|431458849|gb|ELH39168.1| GTP-binding protein TypA/BipA [Escherichia coli KTE184]
gi|431459425|gb|ELH39719.1| GTP-binding protein TypA/BipA [Escherichia coli KTE183]
gi|431466778|gb|ELH46795.1| GTP-binding protein TypA/BipA [Escherichia coli KTE196]
gi|431467017|gb|ELH47029.1| GTP-binding protein TypA/BipA [Escherichia coli KTE202]
gi|431476206|gb|ELH56000.1| GTP-binding protein typA/BipA [Escherichia coli KTE203]
gi|431477129|gb|ELH56900.1| GTP-binding protein TypA/BipA [Escherichia coli KTE197]
gi|431485245|gb|ELH64909.1| GTP-binding protein TypA/BipA [Escherichia coli KTE209]
gi|431486762|gb|ELH66408.1| GTP-binding protein TypA/BipA [Escherichia coli KTE211]
gi|431489987|gb|ELH69610.1| GTP-binding protein TypA/BipA [Escherichia coli KTE207]
gi|431493014|gb|ELH72609.1| GTP-binding protein TypA/BipA [Escherichia coli KTE215]
gi|431501575|gb|ELH80554.1| GTP-binding protein TypA/BipA [Escherichia coli KTE217]
gi|431503851|gb|ELH82585.1| GTP-binding protein TypA/BipA [Escherichia coli KTE223]
gi|431513860|gb|ELH91939.1| GTP-binding protein TypA/BipA [Escherichia coli KTE218]
gi|431520627|gb|ELH97948.1| GTP-binding protein TypA/BipA [Escherichia coli KTE229]
gi|431525721|gb|ELI02502.1| GTP-binding protein TypA/BipA [Escherichia coli KTE104]
gi|431526290|gb|ELI03047.1| GTP-binding protein TypA/BipA [Escherichia coli KTE105]
gi|431529965|gb|ELI06655.1| GTP-binding protein TypA/BipA [Escherichia coli KTE106]
gi|431539836|gb|ELI15474.1| GTP-binding protein TypA/BipA [Escherichia coli KTE109]
gi|431545545|gb|ELI20196.1| GTP-binding protein TypA/BipA [Escherichia coli KTE112]
gi|431547615|gb|ELI21911.1| GTP-binding protein TypA/BipA [Escherichia coli KTE113]
gi|431551898|gb|ELI25862.1| GTP-binding protein TypA/BipA [Escherichia coli KTE117]
gi|431561438|gb|ELI34808.1| GTP-binding protein TypA/BipA [Escherichia coli KTE120]
gi|431565158|gb|ELI38300.1| GTP-binding protein TypA/BipA [Escherichia coli KTE122]
gi|431565356|gb|ELI38489.1| GTP-binding protein TypA/BipA [Escherichia coli KTE124]
gi|431577397|gb|ELI50032.1| GTP-binding protein TypA/BipA [Escherichia coli KTE125]
gi|431578264|gb|ELI50875.1| GTP-binding protein typA/BipA [Escherichia coli KTE128]
gi|431582037|gb|ELI54473.1| GTP-binding protein TypA/BipA [Escherichia coli KTE129]
gi|431592635|gb|ELI63205.1| GTP-binding protein TypA/BipA [Escherichia coli KTE131]
gi|431597112|gb|ELI67025.1| GTP-binding protein TypA/BipA [Escherichia coli KTE133]
gi|431600141|gb|ELI69817.1| GTP-binding protein typA/BipA [Escherichia coli KTE137]
gi|431606376|gb|ELI75753.1| GTP-binding protein TypA/BipA [Escherichia coli KTE138]
gi|431611845|gb|ELI81108.1| GTP-binding protein TypA/BipA [Escherichia coli KTE139]
gi|431615565|gb|ELI84693.1| GTP-binding protein TypA/BipA [Escherichia coli KTE145]
gi|431623198|gb|ELI91872.1| GTP-binding protein TypA/BipA [Escherichia coli KTE148]
gi|431624106|gb|ELI92728.1| GTP-binding protein TypA/BipA [Escherichia coli KTE150]
gi|431630028|gb|ELI98370.1| GTP-binding protein TypA/BipA [Escherichia coli KTE153]
gi|431638301|gb|ELJ06339.1| GTP-binding protein TypA/BipA [Escherichia coli KTE157]
gi|431639527|gb|ELJ07383.1| GTP-binding protein TypA/BipA [Escherichia coli KTE160]
gi|431641865|gb|ELJ09598.1| GTP-binding protein TypA/BipA [Escherichia coli KTE163]
gi|431652863|gb|ELJ19983.1| GTP-binding protein TypA/BipA [Escherichia coli KTE166]
gi|431655078|gb|ELJ22119.1| GTP-binding protein TypA/BipA [Escherichia coli KTE167]
gi|431656836|gb|ELJ23810.1| GTP-binding protein typA/BipA [Escherichia coli KTE168]
gi|431666585|gb|ELJ33213.1| GTP-binding protein TypA/BipA [Escherichia coli KTE174]
gi|431672925|gb|ELJ39158.1| GTP-binding protein TypA/BipA [Escherichia coli KTE177]
gi|431682925|gb|ELJ48570.1| GTP-binding protein TypA/BipA [Escherichia coli KTE179]
gi|431683325|gb|ELJ48962.1| GTP-binding protein typA/BipA [Escherichia coli KTE180]
gi|431686998|gb|ELJ52551.1| GTP-binding protein TypA/BipA [Escherichia coli KTE232]
gi|431697516|gb|ELJ62625.1| GTP-binding protein TypA/BipA [Escherichia coli KTE82]
gi|431701100|gb|ELJ66021.1| GTP-binding protein TypA/BipA [Escherichia coli KTE85]
gi|431701155|gb|ELJ66075.1| GTP-binding protein TypA/BipA [Escherichia coli KTE88]
gi|431712808|gb|ELJ77085.1| GTP-binding protein TypA/BipA [Escherichia coli KTE90]
gi|431715352|gb|ELJ79517.1| GTP-binding protein TypA/BipA [Escherichia coli KTE95]
gi|431716488|gb|ELJ80600.1| GTP-binding protein typA/BipA [Escherichia coli KTE94]
gi|431727842|gb|ELJ91577.1| GTP-binding protein TypA/BipA [Escherichia coli KTE97]
gi|431731164|gb|ELJ94674.1| GTP-binding protein TypA/BipA [Escherichia coli KTE99]
gi|432345224|gb|ELL39742.1| GTP-binding protein [Escherichia coli J96]
gi|441605093|emb|CCP99587.1| GTP-binding protein TypA/BipA [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|441652776|emb|CCQ04094.1| GTP-binding protein TypA/BipA [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|441711635|emb|CCQ07942.1| GTP-binding protein TypA/BipA [Escherichia coli Nissle 1917]
gi|443419857|gb|AGC84761.1| GTP-binding protein [Escherichia coli APEC O78]
gi|444534795|gb|ELV14979.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0814]
gi|444536248|gb|ELV16278.1| GTP-binding protein TypA/BipA [Escherichia coli 09BKT078844]
gi|444545049|gb|ELV24006.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0815]
gi|444554145|gb|ELV31725.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0816]
gi|444554500|gb|ELV32063.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0839]
gi|444559057|gb|ELV36305.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0848]
gi|444568759|gb|ELV45412.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1753]
gi|444572222|gb|ELV48667.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1775]
gi|444575647|gb|ELV51877.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1793]
gi|444587773|gb|ELV63182.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1805]
gi|444588939|gb|ELV64296.1| GTP-binding protein TypA/BipA [Escherichia coli ATCC 700728]
gi|444589150|gb|ELV64493.1| GTP-binding protein TypA/BipA [Escherichia coli PA11]
gi|444602945|gb|ELV77662.1| GTP-binding protein TypA/BipA [Escherichia coli PA13]
gi|444603043|gb|ELV77759.1| GTP-binding protein TypA/BipA [Escherichia coli PA19]
gi|444612207|gb|ELV86507.1| GTP-binding protein TypA/BipA [Escherichia coli PA2]
gi|444618740|gb|ELV92811.1| GTP-binding protein TypA/BipA [Escherichia coli PA47]
gi|444620093|gb|ELV94109.1| GTP-binding protein TypA/BipA [Escherichia coli PA48]
gi|444626420|gb|ELW00214.1| GTP-binding protein TypA/BipA [Escherichia coli PA8]
gi|444634965|gb|ELW08407.1| GTP-binding protein TypA/BipA [Escherichia coli 7.1982]
gi|444636952|gb|ELW10335.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1781]
gi|444641778|gb|ELW14996.1| GTP-binding protein TypA/BipA [Escherichia coli 99.1762]
gi|444651589|gb|ELW24390.1| GTP-binding protein TypA/BipA [Escherichia coli PA35]
gi|444656842|gb|ELW29350.1| GTP-binding protein TypA/BipA [Escherichia coli 3.4880]
gi|444659316|gb|ELW31736.1| GTP-binding protein TypA/BipA [Escherichia coli 95.0083]
gi|444671732|gb|ELW43516.1| GTP-binding protein TypA/BipA [Escherichia coli 99.0670]
gi|449313470|gb|EMD03679.1| GTP-binding protein [Escherichia coli O08]
gi|449314094|gb|EMD04273.1| GTP-binding protein [Escherichia coli S17]
gi|449315933|gb|EMD06059.1| GTP-binding protein [Escherichia coli SEPT362]
Length = 607
Score = 699 bits (1804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|420327799|ref|ZP_14829538.1| GTP-binding protein TypA/BipA [Shigella flexneri CCH060]
gi|391246184|gb|EIQ05446.1| GTP-binding protein TypA/BipA [Shigella flexneri CCH060]
Length = 607
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVGHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|332307734|ref|YP_004435585.1| GTP-binding protein TypA [Glaciecola sp. 4H-3-7+YE-5]
gi|410643636|ref|ZP_11354129.1| GTP-binding protein TypA/BipA [Glaciecola chathamensis S18K6]
gi|410646936|ref|ZP_11357377.1| GTP-binding protein TypA/BipA [Glaciecola agarilytica NO2]
gi|332175063|gb|AEE24317.1| GTP-binding protein TypA [Glaciecola sp. 4H-3-7+YE-5]
gi|410133437|dbj|GAC05776.1| GTP-binding protein TypA/BipA [Glaciecola agarilytica NO2]
gi|410136716|dbj|GAC12316.1| GTP-binding protein TypA/BipA [Glaciecola chathamensis S18K6]
Length = 611
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTLESRGAAEERVMDSNDIEKERGITILAKNTAIRWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A+ ++ +M PLFE
Sbjct: 135 KIDKPGARPDWVIDQVFDLFDNLGATDDQLDFQVVYASALNGWASNDADQPSEDMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K+V + + P Q+QI L+Y+SY+G IG+GR+ G +K+ Q V I+ G D K
Sbjct: 195 TIVKHVNAPDADIDGPFQMQISQLDYNSYVGVIGVGRVTRGSVKTNQAVTIV-GADGKKR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR+ V+ A +GDI+ +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 254 NGKMGQVLGYMGLDRMEVDVANAGDIIAVTGLGELKISDTICDQNAVEALPALSVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFCGKEGKYVTSRNILERLQDELIHNVALRVDETPDPDK-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI + ++G+L EP+E + +D++E +QG IM+++ R G+L
Sbjct: 373 GILIENMRREGYELAVSRPEVILREVDGKLEEPFETVTIDVQEDHQGSIMEQIGLRKGEL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+R+++ IPSRGLIGFQ +F+T+T G+GL+ H F+ Y P ++G+R
Sbjct: 433 TNMSPDGKGRIRMDFIIPSRGLIGFQTDFMTMTSGSGLMYHTFDHYGPHKGG---NIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 490 KNGVLIANATGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P+ ++LE A+EFI++DELVE+TPK+IR+RK+ L EN+RK+
Sbjct: 550 TNVRASGTDEAQSLVPPVLLSLEQALEFIDNDELVEVTPKSIRIRKKLLTENDRKR 605
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLESRGAAEERVMDSNDIEKERGITILAKNTAIRWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 133
Query: 176 NKIDK 180
NKIDK
Sbjct: 134 NKIDK 138
>gi|410617488|ref|ZP_11328455.1| GTP-binding protein TypA/BipA [Glaciecola polaris LMG 21857]
gi|410162942|dbj|GAC32593.1| GTP-binding protein TypA/BipA [Glaciecola polaris LMG 21857]
Length = 611
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTLESRGAAEERVMDSNDIEKERGITILAKNTAIRWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVLN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A+ ++ +M PLFE
Sbjct: 135 KIDKPGARPDWVIDQVFDLFDNLGATDDQLDFQVVYASALNGWASIDADKPSEDMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K+V + + P Q+QI L+Y+SY+G IG+GRI G + Q V ++ G D K
Sbjct: 195 TIVKHVKAPSGDIDGPFQMQISQLDYNSYVGVIGVGRISRGSARINQAVTVI-GADGKKR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AKI QI + GLDR + GDIV +TG+ E+ I TICDP+ LP L++DEPT+
Sbjct: 254 NAKIGQILGYMGLDRTEIEVGTVGDIVAVTGVGELKISDTICDPNTVEALPPLSVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP G+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 314 TMTFQVNNSPFCGKEGKYVTSRNILERLQDELIHNVALRVDETADPDK-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI + ++G+L EP+E + +D EE +QG IM+++ R G+L
Sbjct: 373 GILIENMRREGYELAVSRPEVILREVDGKLEEPFETVTIDCEEQHQGSIMEQIGLRKGEL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+R+++ IPSRGLIGFQ +F+T+T G+GL+ H F+ Y P ++G+R
Sbjct: 433 TNMSPDGKGRIRMDFIIPSRGLIGFQTDFLTMTSGSGLLYHTFDHYGPHKGG---NIGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIH+R+NDL VN +K KQL
Sbjct: 490 KNGVLIANATGKALTNALFNLQERGRMFIGHATEVYEGMLIGIHTRENDLTVNALKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA LI PI ++LE A+EFI++DELVE+TPK+IRLRK+ L EN+RK+
Sbjct: 550 TNVRSSGTDEAQTLIPPIVMSLEQALEFIDNDELVEVTPKSIRLRKKLLTENDRKR 605
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLESRGAAEERVMDSNDIEKERGITILAKNTAIRWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVL 133
Query: 176 NKIDK 180
NKIDK
Sbjct: 134 NKIDK 138
>gi|420278000|ref|ZP_14780277.1| GTP-binding protein TypA/BipA [Escherichia coli PA40]
gi|425195930|ref|ZP_18592684.1| GTP-binding protein TypA/BipA [Escherichia coli NE1487]
gi|425208787|ref|ZP_18604568.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK2001]
gi|390755594|gb|EIO25130.1| GTP-binding protein TypA/BipA [Escherichia coli PA40]
gi|408105575|gb|EKH37726.1| GTP-binding protein TypA/BipA [Escherichia coli NE1487]
gi|408118526|gb|EKH49654.1| GTP-binding protein TypA/BipA [Escherichia coli FRIK2001]
Length = 607
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILERLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|194435177|ref|ZP_03067408.1| GTP-binding protein TypA [Shigella dysenteriae 1012]
gi|194416575|gb|EDX32713.1| GTP-binding protein TypA [Shigella dysenteriae 1012]
Length = 607
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGEGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|319762634|ref|YP_004126571.1| translation initiation factor if-2 [Alicycliphilus denitrificans
BC]
gi|330824724|ref|YP_004388027.1| translation initiation factor IF-2 [Alicycliphilus denitrificans
K601]
gi|317117195|gb|ADU99683.1| translation initiation factor IF-2 [Alicycliphilus denitrificans
BC]
gi|329310096|gb|AEB84511.1| translation initiation factor IF-2 [Alicycliphilus denitrificans
K601]
Length = 943
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/539 (59%), Positives = 435/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F E + +
Sbjct: 378 MAIKASEVIKALMKMGQMVTINQPLDQDTAMIVVEEMGHKAVVAALDDPEAFTAEEVSSH 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 438 -QAEALPRAPVVTVMGHVDHGKTSLLDYIRRAKVAPGEAGGITQHIGAYHVKTPRGIVTF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LV AADDGVMPQTREAI HAK +GVP++VAI K DK
Sbjct: 497 LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTREAIKHAKAAGVPIVVAITKADK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +++KQ+L++E+V+PEEYGG SPF+++S+KTG+GI++LLE + LQAE+LELKAPV
Sbjct: 557 HEANPEKVKQELVAEEVVPEEYGGDSPFVAVSSKTGMGIDELLEQVLLQAEVLELKAPVD 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG ++GR+R+M +ENG+ +AGP
Sbjct: 617 AMAKGLVIEAQLDKGRGPVATVLVQSGTLKVGDVVLAGQTFGRVRAMTDENGRTTKDAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K E++F+++
Sbjct: 677 SIPVEIQGLSEVPQAGDEFMVLSDERRAREIATYRAGKFRNTKLAKQQAAKLESVFSEMT 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V++L IIIK DV GS+E L SL LSTD++K+Q+++ VG I+ESD+NLAIASKAI
Sbjct: 737 AGEVQHLPIIIKADVQGSQEALAASLLKLSTDEIKVQLVYAGVGGISESDVNLAIASKAI 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RK A+ N + + Y+NIIY+ + E+K+ ++ ++ E++E ++G AEIR
Sbjct: 797 VIGFNVRADAGARKTAEANGVQLHYYNIIYDAVDELKAAMSGMLAPEQREEVIGTAEIRT 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + K+ IAG YI G + R + R+LR+ +I+TGE++S++R KD+VKEVK GFEC
Sbjct: 857 VFVATKIGTIAGSYITSGQVTRGCRFRLLRDNVVIYTGEVESVRRLKDDVKEVKEGFEC 915
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RGI F
Sbjct: 450 VMGHVDHGKTSLLDYIRRAKVAPGEAGGITQHI-GAYHVKTPRGIVTF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L+ A +G MPQTR + A G +V + K
Sbjct: 497 ---LDTPGHEAFTAMRARGAQATDIVILVCAADDGVMPQTREAIKHAKAAGVPIVVAITK 553
Query: 1047 IDRSNARPEWV 1057
D+ A PE V
Sbjct: 554 ADKHEANPEKV 564
>gi|206579425|ref|YP_002241250.1| GTP-binding protein [Klebsiella pneumoniae 342]
gi|288937888|ref|YP_003441947.1| GTP-binding protein TypA [Klebsiella variicola At-22]
gi|290513112|ref|ZP_06552475.1| GTP-binding protein TypA/BipA [Klebsiella sp. 1_1_55]
gi|206568483|gb|ACI10259.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae 342]
gi|288892597|gb|ADC60915.1| GTP-binding protein TypA [Klebsiella variicola At-22]
gi|289774494|gb|EFD82499.1| GTP-binding protein TypA/BipA [Klebsiella sp. 1_1_55]
Length = 607
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/598 (56%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDRVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDVAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRKRAM 601
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|337279598|ref|YP_004619070.1| translation initiation factor IF-2 [Ramlibacter tataouinensis
TTB310]
gi|334730675|gb|AEG93051.1| Candidate translation initiation factor IF-2 [Ramlibacter
tataouinensis TTB310]
Length = 954
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/539 (61%), Positives = 438/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F +
Sbjct: 389 MAVKASEVIKALMKMGQMVTINQPLDQDTAMIVVEEMGHKAVTAALDDPEAFTEEDVG-T 447
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E+L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G I+F
Sbjct: 448 ADGEALSRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGMISF 507
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQTREAI HAK +GVP++VA+NKIDK
Sbjct: 508 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTREAIKHAKAAGVPIVVAVNKIDK 567
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
INL+R+KQ+L+ E+V+PEEYGG SPF+++SA TG GI+ LLE + LQAE+LELKAPV
Sbjct: 568 PGINLERVKQELVVEEVVPEEYGGESPFVNVSALTGQGIDDLLEQVLLQAEVLELKAPVE 627
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+++E++LDKG+GPVATVL+QSGTL+ D+V+AG +YGR+R+ML+ENGK I AGP
Sbjct: 628 APAKGLVVEAQLDKGRGPVATVLVQSGTLKTGDVVLAGQTYGRVRAMLDENGKTIKSAGP 687
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF D+
Sbjct: 688 SIPVEIQGLTEVPQAGDEFMVLADERRAREIATYRAGKFRNTKLAKQQAAKLENMFTDMT 747
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L II+K DV GS+E L++SL LSTD+VK+Q+++ VG I+ESD+NLAIASKA+
Sbjct: 748 AGEVKTLPIIVKADVQGSQEALSQSLLKLSTDEVKVQMVYTGVGGISESDVNLAIASKAV 807
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADA RKLA+ N ++IRY++IIY+ + E+K ++ ++ E+KE ++G AEIR
Sbjct: 808 IIGFNVRADAGARKLAEGNGVDIRYYSIIYDAVDELKVAMSGMLAPEQKEEVIGTAEIRT 867
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI G + R+ + R+LR+ +++TGE++S+KR KD+V+EVK GFEC
Sbjct: 868 VFVASKIGTVAGSYITSGQVTRNCRFRLLRDNVVVYTGEVESVKRMKDDVREVKEGFEC 926
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+
Sbjct: 461 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGM--------------- 504
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I+ +DTPGH F R D V+L++ A +G MPQTR + A G +V VNK
Sbjct: 505 ISFLDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTREAIKHAKAAGVPIVVAVNK 564
Query: 1047 IDR 1049
ID+
Sbjct: 565 IDK 567
>gi|392981353|ref|YP_006479941.1| GTP-binding protein [Enterobacter cloacae subsp. dissolvens SDM]
gi|392327286|gb|AFM62239.1| GTP-binding protein [Enterobacter cloacae subsp. dissolvens SDM]
Length = 607
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/598 (56%), Positives = 452/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHENMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSIRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|365972774|ref|YP_004954335.1| GTP-binding protein TypA/BipA [Enterobacter cloacae EcWSU1]
gi|365751687|gb|AEW75914.1| GTP-binding protein TypA/BipA [Enterobacter cloacae EcWSU1]
Length = 607
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/598 (56%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHENMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSELAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETQDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSIRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|417087891|ref|ZP_11954710.1| GTP-binding protein [Escherichia coli cloneA_i1]
gi|355349379|gb|EHF98585.1| GTP-binding protein [Escherichia coli cloneA_i1]
Length = 607
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT EQLDFP++Y SAL+G A + + G++ PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATYEQLDFPIVYDSALNGIAGLDHEDMAGDLTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTITSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|421561669|ref|ZP_16007508.1| translation initiation factor IF-2 [Neisseria meningitidis NM2657]
gi|402336974|gb|EJU72229.1| translation initiation factor IF-2 [Neisseria meningitidis NM2657]
Length = 962
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/561 (60%), Positives = 449/561 (80%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV SEAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQSEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 63/135 (46%), Gaps = 24/135 (17%)
Query: 927 IIAHVDHGKTTLIDHLLR----QSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY 982
++ HVDHGKT+L+D++ R QS Q+I A +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQSEAGGITQHIGAY-----HVETPRGVITF-------- 515
Query: 983 NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
+DTPGH F R D V+L++ A +G MPQT A G +V
Sbjct: 516 -------LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVV 568
Query: 1043 VVNKIDRSNARPEWV 1057
VNKID+ A PE +
Sbjct: 569 AVNKIDKEAANPERI 583
>gi|87120374|ref|ZP_01076269.1| GTP-binding protein TypA [Marinomonas sp. MED121]
gi|86164477|gb|EAQ65747.1| GTP-binding protein TypA [Marinomonas sp. MED121]
Length = 603
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/600 (55%), Positives = 443/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + RIMDSN+ EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLDRKDEGAERIMDSNDQEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD V LL+DAV+GPMPQTRFVT KA + G +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDCVCLLVDAVDGPMPQTRFVTSKAFEQGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP++V+D FDLFD L ATEEQLDFPVIY SA++G A E+ + +M PL++
Sbjct: 129 KIDRPGARPDYVMDQVFDLFDSLGATEEQLDFPVIYASAINGIAGEDPEEMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP K + Q+QI +L+Y SY+G IG+GRI G++ Q VVI + D
Sbjct: 189 MIVDSVPAPKVDPEGDFQMQISALDYDSYVGVIGVGRITRGKLSPNQQVVIKSA-DGSER 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K K+ ++ + GLDR+ A +GDIV I GI+++ I T+C+P+ LP L++DEPT+
Sbjct: 248 KGKVLNVKGYMGLDRIDTELATAGDIVCINGIDKLSISDTLCEPTNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++NF+VN+SP AG+EGKF+TTR IK+RLD E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 308 SMNFIVNDSPFAGKEGKFVTTRNIKDRLDQELIHNVALRVEQGDTPDK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ VSRP V+ K ++G + EP+E + +D+E+ +QG IM++L R +L
Sbjct: 367 SVLIETMRREGFEMGVSRPEVVTKEIDGVMSEPFEQVVIDVEDQHQGAIMEELGLRKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K R RLE+ +PSRGLIGF+ F+TLT G+G+++ VF+ Y P ++ R
Sbjct: 427 TNMEPDGKGRTRLEFMMPSRGLIGFRGLFLTLTSGSGIMTSVFDHYGPV---KVGEVQSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GK AYSL+ LQ RGR+F+ H VYEG IIGIHSRDNDL VNP+K KQL
Sbjct: 484 KNGVLVSMLAGKTAAYSLFNLQSRGRMFLGHAVEVYEGQIIGIHSRDNDLAVNPVKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA+ L PI+ TLE A+EFI DDELVE+TP +IR+RK+ L ENERK+ K
Sbjct: 544 TNVRASGTDEALTLTPPIRHTLEQALEFIEDDELVEVTPDSIRVRKKLLTENERKRAGRK 603
Score = 61.2 bits (147), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLDRKDEGAERIMDSNDQEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V L+V A DG MPQTR + A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDCVCLLVDAVDGPMPQTRFVTSKAFEQGLRPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|442609419|ref|ZP_21024157.1| GTP-binding protein TypA/BipA [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441749176|emb|CCQ10219.1| GTP-binding protein TypA/BipA [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 607
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/596 (56%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT +K + R+MDSN++EKERGITI +KN +I++N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLQKRGGNDERVMDSNDLEKERGITILAKNTAIKWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+D+ ARP+WV+D FDLFD L AT+EQLDF VIY SA++G+A + NM P+F+
Sbjct: 130 KVDKPGARPDWVMDQVFDLFDNLGATDEQLDFKVIYASAINGWATLDLDQPSDNMEPMFQ 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + N PLQ+QI L+Y+SY+G IG+GRI G K Q V +++ K N
Sbjct: 190 TIVDCVSAPDADLNGPLQMQISQLDYNSYVGVIGVGRIKRGSAKVNQQVSVISADGTKRN 249
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI Q+ + GL+R + A +GDIV ITG+ E+ I T+C P+ LP L++DEPT+
Sbjct: 250 -GKIGQVLGYMGLERHEIEVATAGDIVAITGLGELKISDTVCCPNNVQALPPLSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP +GREGKF+T+R I+ RL E+ +N+ LRV + DS + VSGRGELHL
Sbjct: 309 TMTFSVNTSPFSGREGKFVTSRNIRERLTAELVHNVALRVEDTDNPDS-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI +T++G L EPYE + VD+EE +QG +M++L R ++
Sbjct: 368 GILIENMRREGYELAVSRPEVILRTVDGVLEEPYETVTVDLEEEHQGSVMEQLGLRKAEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVRL++ +PSRGLIGFQ EF+TLT G+GL+ H F Y P ++G+R
Sbjct: 428 TDMCPDGKGRVRLDFLMPSRGLIGFQTEFMTLTSGSGLLYHTFSHYGPHKGG---NIGQR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQDRGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 485 KNGVLIANAAGKALTNALYNLQDRGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKAKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R++G+DEA L+ PI ++LE A+EFI+DDELVE+TPK+IR+RK+ L ENERK+
Sbjct: 545 TNVRAAGTDEAQNLVPPILMSLEQALEFIDDDELVEVTPKSIRIRKKLLTENERKR 600
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLQKRGGNDERVMDSNDLEKERGITILAKNTAIKWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YRINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 128
Query: 176 NKIDK 180
NK+DK
Sbjct: 129 NKVDK 133
>gi|119475103|ref|ZP_01615456.1| predicted membrane GTPase involved in stress response [marine gamma
proteobacterium HTCC2143]
gi|119451306|gb|EAW32539.1| predicted membrane GTPase involved in stress response [marine gamma
proteobacterium HTCC2143]
Length = 601
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + R+MDSN+ EKERGITI +KN +IE+NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLAQSGTLERRDEGAERVMDSNDQEKERGITILAKNTAIEWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAV+GPMPQTRFVT KA + G PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDCVLLLVDAVDGPMPQTRFVTSKAFEQGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D F+LFD L AT+EQLDFPVIYTSA++G A +S+ +M PLFE
Sbjct: 129 KIDRPGARPDWVMDQVFELFDNLGATDEQLDFPVIYTSAINGIAGLDSEEMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + P+Q+QI +L++SSY+G IG+GRI G +K Q V+++ G D K
Sbjct: 189 MIVDKVDAPDVDIDGPVQMQISALDFSSYVGVIGVGRIARGVLKPNQQVIVV-GADGKER 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K ++ ++ GL+R+ V+EA +GDIV ITGI+ + I T+CDP K LP L++DEPT+
Sbjct: 248 KGRVLKVMGHLGLERIEVSEARAGDIVCITGIDGLSISDTLCDPDKIEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F+VN+SP AG+EGKF+TTR IK+RLD E+ +N+ LRV D + VSGRGELHL
Sbjct: 308 SMTFIVNDSPFAGKEGKFVTTRNIKDRLDQELIHNVALRVAAGDSPDK-FVVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ +SRP V+ K ++G+ +EPYE + +DIE+ +QG IM++L R +L
Sbjct: 367 SVLIETMRREGFEMCISRPEVVQKEVDGKTHEPYEIVVIDIEDQHQGSIMEELGLRKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K RVRLE+ +PSRGLIGF+ F+TLT G+G+++ +F Y + D+ KR
Sbjct: 427 TNMEPDGKGRVRLEFLMPSRGLIGFRGLFLTLTSGSGIMTSIFAHYG---LAKEGDVAKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S SGK AY+L+ +Q RGRLF+ H +YEG I+G+HSR+NDL +NPIK KQL
Sbjct: 484 QNGVLVSMVSGKTAAYALFNIQSRGRLFLGHAVDIYEGQIVGLHSRNNDLAINPIKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L P+ TLE A+EFI DDELVE+TP++IRLRK+ L EN RK+
Sbjct: 544 TNVRASGTDEALTLSPPVTHTLEQALEFIEDDELVEVTPESIRLRKKLLTENARKR 599
Score = 60.1 bits (144), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLAQSGTLERRDEGAERVMDSNDQEKERGITILAKNTAIEWNG 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR + A G+ IV I
Sbjct: 68 YHINIVDTPGHADFGGEVERVLSMVDCVLLLVDAVDGPMPQTRFVTSKAFEQGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|424034458|ref|ZP_17773863.1| GTP-binding protein TypA/BipA [Vibrio cholerae HENC-01]
gi|424043004|ref|ZP_17780657.1| GTP-binding protein TypA/BipA [Vibrio cholerae HENC-02]
gi|408873061|gb|EKM12268.1| GTP-binding protein TypA/BipA [Vibrio cholerae HENC-01]
gi|408882431|gb|EKM21256.1| GTP-binding protein TypA/BipA [Vibrio cholerae HENC-02]
Length = 609
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ NM PLFE
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWASLEEGETGENMEPLFE 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K+ Q V ++ G D K
Sbjct: 193 TIVEEVAAPEVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKANQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNAVEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLLEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ YAP ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFEMPSRGLIGFQTEFMTLTSGSGLLYHTFDRYAPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLIANAMGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PIK+TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIKMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|237727979|ref|ZP_04558460.1| GTP-binding protein [Citrobacter sp. 30_2]
gi|226910236|gb|EEH96154.1| GTP-binding protein [Citrobacter sp. 30_2]
Length = 607
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/598 (55%), Positives = 452/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 TIVDRVPAPSVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRAGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|387614560|ref|YP_006117676.1| putative lipopolysaccharide core biosynthesis GTP-binding protein
[Escherichia coli ETEC H10407]
gi|404377259|ref|ZP_10982396.1| GTP-binding protein TypA/BipA [Escherichia sp. 1_1_43]
gi|422768950|ref|ZP_16822673.1| GTP-binding protein TypA/BipA [Escherichia coli E1520]
gi|422819017|ref|ZP_16867229.1| GTP-binding protein TypA/BipA [Escherichia coli M919]
gi|226838520|gb|EEH70549.1| GTP-binding protein TypA/BipA [Escherichia sp. 1_1_43]
gi|309704296|emb|CBJ03645.1| putative lipopolysaccharide core biosynthesis GTP-binding protein
[Escherichia coli ETEC H10407]
gi|323934358|gb|EGB30771.1| GTP-binding protein TypA/BipA [Escherichia coli E1520]
gi|385537445|gb|EIF84317.1| GTP-binding protein TypA/BipA [Escherichia coli M919]
Length = 607
Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPISIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|350529901|ref|ZP_08908842.1| GTPase [Vibrio rotiferianus DAT722]
Length = 609
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLFE
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATLEEGETGENMEPLFE 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K+ Q V ++ G D K
Sbjct: 193 TIVEEVAAPEVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKANQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNAVEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ YAP ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFEMPSRGLIGFQTEFMTLTSGSGLLYHTFDRYAPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLIANAMGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PIK+TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIKMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|261379111|ref|ZP_05983684.1| translation initiation factor IF-2 [Neisseria cinerea ATCC 14685]
gi|269144432|gb|EEZ70850.1| translation initiation factor IF-2 [Neisseria cinerea ATCC 14685]
Length = 959
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 442/561 (78%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 394 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGVEA 452
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 453 ADAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 512
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 513 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 572
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 573 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 632
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK I EAGP
Sbjct: 633 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAINEAGP 692
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 693 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 752
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 753 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 812
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 813 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 872
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 873 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 932
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 933 LMIKGYNEIMEG-DQLECFDI 952
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 466 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 512
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 513 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 569
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 570 IDKDTANPERI 580
>gi|30064840|ref|NP_839011.1| GTP-binding protein [Shigella flexneri 2a str. 2457T]
gi|30043100|gb|AAP18822.1| putative GTP-binding factor [Shigella flexneri 2a str. 2457T]
Length = 607
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 453/596 (76%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP +G+EGKF+T+RQI +RL+ ++ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFSGKEGKFVTSRQILDRLNKKLVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|392548694|ref|ZP_10295831.1| GTP-binding protein TypA [Pseudoalteromonas rubra ATCC 29570]
Length = 606
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN+IEKERGITI +KN +IE+N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAIEWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT+KA LG KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFALGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF VIY SA++G+A + NM P+FE
Sbjct: 130 KIDKPGARPDWVMDQVFDLFDNLGATDEQLDFQVIYASAINGWATLDLDEPSDNMQPMFE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ V + Q+QI L+Y+SY+G IG+GRI G +K Q V I+ G D
Sbjct: 190 AIVEQVEQPDADPAGDFQMQISQLDYNSYIGVIGVGRIKRGTVKVNQQVTIV-GADGTTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR EA +GDI+ ITG+ E+ I T+CD + LP L++DEPT+
Sbjct: 249 NGKVGQVLTYLGLDRHEAQEAQAGDIIAITGLGELKISDTVCDVNAVEALPALSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP +G+EGKF+T+R I RL E+ +N+ LRV + + DS + VSGRGELHL
Sbjct: 309 TMTFSVNTSPFSGQEGKFVTSRNILERLQAELVHNVALRVEETDNPDS-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI + ++G+L EPYE + VD+EE +QG IM++L R ++
Sbjct: 368 GILIENMRREGYELAVSRPEVILREVDGQLEEPYETVTVDVEEEHQGSIMEQLGLRKAEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R+R+++ +PSRGLIGFQ +F+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 428 TDMAPDGKGRIRMDFMMPSRGLIGFQTDFMTLTSGSGLMYHTFDHYGPHKGG---NIGQR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQDRG+LFI H VYEGMIIGIH+RDNDL VN +K KQL
Sbjct: 485 KNGVLIANAAGKALTNALFNLQDRGKLFIGHGVEVYEGMIIGIHARDNDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PI +TLE A+EFI+DDELVE+TP++IR+RK+ L E+ERK+
Sbjct: 545 TNVRASGTDEAQNLVPPIIMTLEQALEFIDDDELVEVTPESIRIRKKLLTESERKR 600
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAIEWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFALGLKPIVVI 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|283834626|ref|ZP_06354367.1| hypothetical protein CIT292_08829 [Citrobacter youngae ATCC 29220]
gi|291069537|gb|EFE07646.1| GTP-binding protein TypA/BipA [Citrobacter youngae ATCC 29220]
Length = 607
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 TIVDRVPAPNVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESTVAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRAGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|283787463|ref|YP_003367328.1| lipopolysaccharide core biosynthesis GTP-binding protein [Citrobacter
rodentium ICC168]
gi|282950917|emb|CBG90594.1| putative lipopolysaccharide core biosynthesis GTP-binding protein
[Citrobacter rodentium ICC168]
Length = 607
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/598 (55%), Positives = 453/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP K LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPQKVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP++IR+RKR L EN+R++ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRRRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|109897349|ref|YP_660604.1| GTP-binding protein TypA [Pseudoalteromonas atlantica T6c]
gi|109699630|gb|ABG39550.1| GTP-binding protein TypA [Pseudoalteromonas atlantica T6c]
Length = 623
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 27 AIIAHVDHGKTTLVDKLLQQSGTLESRGAAEERVMDSNDIEKERGITILAKNTAIRWNDY 86
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 87 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 146
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A+ ++ +M PLFE
Sbjct: 147 KIDKPGARPDWVIDQVFDLFDNLGATDDQLDFQVVYASALNGWASNDADKPSEDMTPLFE 206
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K+V + + P Q+QI L+Y+SY+G IG+GR+ G IK+ Q V ++ G D K
Sbjct: 207 TIVKHVNAPDADIDGPFQMQISQLDYNSYVGVIGVGRVTRGSIKTNQAVTVI-GADGKKR 265
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR+ V+ A +GDI+ +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 266 NGKMGQVLGYMGLDRMEVDVANAGDIIAVTGLGELKISDTICDQNTVEALPPLSVDEPTV 325
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 326 TMTFQVNTSPFCGKEGKYVTSRNILERLQDELIHNVALRVDETPDPDK-FRVSGRGELHL 384
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI + ++G+L EP+E + +D++E +QG IM+++ R G+L
Sbjct: 385 GILIENMRREGYELAVSRPEVILREVDGKLEEPFETVTIDVQEDHQGSIMEQIGLRKGEL 444
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+R+++ IPSRGLIGFQ +F+T+T G+GL+ H F+ Y P ++G+R
Sbjct: 445 TNMSPDGKGRIRMDFIIPSRGLIGFQTDFMTMTSGSGLMYHTFDHYGPHKGG---NIGQR 501
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 502 KNGVLIANATGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 561
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P+ ++LE A+EFI++DELVE+TPK+IR+RK+ L EN+RK+
Sbjct: 562 TNVRASGTDEAQSLVPPVVLSLEQALEFIDNDELVEVTPKSIRIRKKLLTENDRKR 617
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 26 IAIIAHVDHGKTTLVDKLLQQSGTLESRGAAEERVMDSNDIEKERGITILAKNTAIRWND 85
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 86 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 145
Query: 176 NKIDK 180
NKIDK
Sbjct: 146 NKIDK 150
>gi|389729059|ref|ZP_10189276.1| GTP-binding protein TypA/BipA [Rhodanobacter sp. 115]
gi|388441158|gb|EIL97461.1| GTP-binding protein TypA/BipA [Rhodanobacter sp. 115]
Length = 609
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/600 (55%), Positives = 445/600 (74%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLAERTVLAERVMDSNDQEKERGITILAKNTAITWQGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD VL+L+DA++GPMPQTRFVT+KA +GFKPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR +RPEWVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA + R+G+M PL+E
Sbjct: 130 KVDRPGSRPEWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYAGLDENVREGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + P Q++I L+Y+S++G IGIGRI G +K V +++ + K
Sbjct: 190 AIMKHVSKPDVDPEGPFQMRISQLDYNSFVGVIGIGRIQRGTMKKGMPVAVID-RNGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ KI Q+ F GL+R+ + A +GDIV I+GI ++ I T+C P LP L +DEPT+
Sbjct: 249 QGKIMQVLGFLGLERIEQDSAEAGDIVAISGIADLTISDTVCALDTPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+K+RLD E +N+ L+V Q D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLKDRLDREQVHNVALKVEQGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+ EP E L +D+EEI+QG +M+++ R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGKKMEPIEQLVIDVEEIHQGPVMERIGIR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRLEY IP+RGLIGFQN+F TLT+G+GL+ HVF+ Y P K
Sbjct: 428 KGQLKNMEPDGKGRVRLEYMIPARGLIGFQNQFKTLTQGSGLLFHVFDHYGP---KEDGQ 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+I+ G AYSL LQ+RG+LF D VYEG ++GIH++DNDL VN IK
Sbjct: 485 IAKRANGVMIANAGGTTPAYSLGPLQERGKLFAAEGDNVYEGQLVGIHAKDNDLTVNVIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AIQL K +LE A++FI+DDELVE+TPK IRLRK+ L EN+RK+
Sbjct: 545 PKPLTNMRASGKDDAIQLTPATKFSLEQALDFIDDDELVEVTPKEIRLRKKHLTENDRKR 604
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVTNHG 116
+ I+ HVDHGKT+L+D + K + +E + + + N +T G
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLAERTVLAERVMDSNDQEKERGITILAKNTAITWQG 68
Query: 117 S-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ I +DTPGH F R + D V+++V A DG MPQTR A G IV I
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDTVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|444376063|ref|ZP_21175312.1| GTP-binding protein TypA/BipA [Enterovibrio sp. AK16]
gi|443679834|gb|ELT86485.1| GTP-binding protein TypA/BipA [Enterovibrio sp. AK16]
Length = 609
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLETRGEHEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + +++ LQ+QI L+YSSY+G IG+GR+ G +K Q V I+ G D K
Sbjct: 193 AIVDNVSAPEVDTDGSLQMQISQLDYSSYVGVIGVGRVTRGSVKPNQQVTIV-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKVGTVLGYLGLERHDVASAAAGDIIAITGLGELKISDTICDVNAVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLQKELVHNVALRVEETEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKEEDGQLMEPFETVTIDVQEEHQGGIMEKIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H ++ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFIMPSRGLIGFQTEFMTLTSGSGLMYHTYDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 NNGVLIANAAGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L SPIK TLE A+EFI+DDELVE+TP++IR+RK+ L E +RK+
Sbjct: 548 TNVRASGTDDAQVLTSPIKYTLEQALEFIDDDELVEVTPESIRIRKKLLTETDRKR 603
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLETRGEHEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|157147347|ref|YP_001454666.1| GTP-binding protein [Citrobacter koseri ATCC BAA-895]
gi|157084552|gb|ABV14230.1| hypothetical protein CKO_03139 [Citrobacter koseri ATCC BAA-895]
Length = 607
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|389783553|ref|ZP_10194875.1| GTP-binding protein TypA/BipA [Rhodanobacter spathiphylli B39]
gi|388434520|gb|EIL91457.1| GTP-binding protein TypA/BipA [Rhodanobacter spathiphylli B39]
Length = 608
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/600 (56%), Positives = 446/600 (74%), Gaps = 9/600 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LL+QSGT + + R+MDSN+ EKERGITI +KN +I + G
Sbjct: 10 AIVAHVDHGKTTLVDCLLKQSGTLNERTVLAERVMDSNDQEKERGITILAKNTAITWQGN 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VL+L+DA++GPMPQTRFVT+KA +GFKPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR +RPEWVV+ +DLFD+L AT EQ+DFP++Y SAL+GYA+ + R+G+M PL+E
Sbjct: 130 KVDRPGSRPEWVVEQVWDLFDRLGATPEQMDFPIVYASALNGYASLDENVREGDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + Q++I L+YSS++G IGIGRI G +K V +++ K
Sbjct: 190 AIMQHVSKPDVDPEGAFQMRISQLDYSSFVGVIGIGRIQRGTLKKGMPVSVVD-RHGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ K+ Q+ F GL+R+ + A +GDIV I+GI E+ I T+C P LP L +DEPT+
Sbjct: 249 QGKVMQVLGFLGLERIEQDSAEAGDIVAISGIAELTISDTVCALDTPEALPALTVDEPTI 308
Query: 1226 TINFMVNNSPLAGRE----GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
++ F VNNSP AG + GKF+T+RQ+++RL+ E +N+ L+V + D + VSGRG
Sbjct: 309 SMTFQVNNSPFAGNKDLSGGKFLTSRQLRDRLEREQVHNVALKVEEGSDADK-FLVSGRG 367
Query: 1282 ELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
ELHL++LIENMRREGYEL+VSRP VI K ++G+ EP E L VD+EEI+QG +M++L R
Sbjct: 368 ELHLSVLIENMRREGYELAVSRPEVIIKEIDGQKMEPIEQLVVDVEEIHQGAVMERLGVR 427
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G LKN+E + K RVRL+Y IP+RGLIGFQN+F TLT+G+GL+ HVF+ Y P K
Sbjct: 428 KGQLKNMEPDGKGRVRLDYEIPARGLIGFQNQFKTLTQGSGLLFHVFDHYGP---KEDGQ 484
Query: 1402 LGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIK 1461
+ KR NGV+I+ G AYSL LQDRG+LF D VYEG ++GIH++DNDL VN IK
Sbjct: 485 IAKRLNGVMIANAGGTTPAYSLGPLQDRGKLFAAEGDNVYEGQLVGIHAKDNDLTVNVIK 544
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG D+AIQL IK TLE A++FI+DDELVEITPK IRLRK+ L EN+RK+
Sbjct: 545 PKPLTNMRASGKDDAIQLTPAIKFTLEQALDFIDDDELVEITPKEIRLRKKHLTENDRKR 604
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVTNHG 116
+ I+ HVDHGKT+L+D + K + +E + + + N +T G
Sbjct: 9 IAIVAHVDHGKTTLVDCLLKQSGTLNERTVLAERVMDSNDQEKERGITILAKNTAITWQG 68
Query: 117 S-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ I +DTPGH F R + D V+++V A DG MPQTR A G IV I
Sbjct: 69 NRINIVDTPGHADFGGEVERVLSMVDSVLILVDAMDGPMPQTRFVTQKAFAMGFKPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|304399048|ref|ZP_07380917.1| GTP-binding protein TypA [Pantoea sp. aB]
gi|440758553|ref|ZP_20937717.1| GTP-binding protein TypA, BipA [Pantoea agglomerans 299R]
gi|304353508|gb|EFM17886.1| GTP-binding protein TypA [Pantoea sp. aB]
gi|436427727|gb|ELP25400.1| GTP-binding protein TypA, BipA [Pantoea agglomerans 299R]
Length = 607
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+I+ SAL+G A +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIFASALNGIAGLEHTDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + ++ PLQ+QI L+Y++YLG IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVAPPQVEADAPLQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPQNVQALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +DIEE +QG +MQ + R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDIEETHQGSVMQAMGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P K+TLE AIEFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPQKMTLEQAIEFIDDDELVEVTPLSVRIRKRHLTENDRKR 599
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|365101189|ref|ZP_09331896.1| GTP-binding protein TypA/BipA [Citrobacter freundii 4_7_47CFAA]
gi|395230175|ref|ZP_10408481.1| GTP-binding protein TypA/BipA [Citrobacter sp. A1]
gi|420368041|ref|ZP_14868815.1| GTP-binding protein TypA/BipA [Shigella flexneri 1235-66]
gi|421846765|ref|ZP_16279910.1| GTP-binding protein [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|424730875|ref|ZP_18159467.1| gtp-binding protein [Citrobacter sp. L17]
gi|363647636|gb|EHL86850.1| GTP-binding protein TypA/BipA [Citrobacter freundii 4_7_47CFAA]
gi|391322722|gb|EIQ79396.1| GTP-binding protein TypA/BipA [Shigella flexneri 1235-66]
gi|394716105|gb|EJF21874.1| GTP-binding protein TypA/BipA [Citrobacter sp. A1]
gi|411771857|gb|EKS55512.1| GTP-binding protein [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|422894588|gb|EKU34397.1| gtp-binding protein [Citrobacter sp. L17]
gi|455641157|gb|EMF20354.1| GTP-binding protein [Citrobacter freundii GTC 09479]
Length = 607
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/598 (55%), Positives = 452/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 TIVDRVPAPNVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRAGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|152972679|ref|YP_001337825.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|238892284|ref|YP_002917018.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|262041655|ref|ZP_06014848.1| glutathione-disulfide reductase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|365144400|ref|ZP_09348663.1| GTP-binding protein TypA/BipA [Klebsiella sp. 4_1_44FAA]
gi|378976188|ref|YP_005224329.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|386037309|ref|YP_005957222.1| GTP-binding protein [Klebsiella pneumoniae KCTC 2242]
gi|402783194|ref|YP_006638740.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419765362|ref|ZP_14291599.1| glutathione-disulfide reductase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|419975296|ref|ZP_14490708.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419981071|ref|ZP_14496350.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419986385|ref|ZP_14501518.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419991996|ref|ZP_14506956.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419998385|ref|ZP_14513173.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420004274|ref|ZP_14518913.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420010019|ref|ZP_14524497.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420016084|ref|ZP_14530379.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420021540|ref|ZP_14535719.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420027063|ref|ZP_14541060.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420032983|ref|ZP_14546793.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420038468|ref|ZP_14552114.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420044569|ref|ZP_14558048.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420050428|ref|ZP_14563727.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420055816|ref|ZP_14568979.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420060649|ref|ZP_14573646.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420067357|ref|ZP_14580150.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420073934|ref|ZP_14586553.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420078540|ref|ZP_14590996.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420084167|ref|ZP_14596433.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421912342|ref|ZP_16342066.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421917956|ref|ZP_16347496.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424833138|ref|ZP_18257866.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424931024|ref|ZP_18349396.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|425079103|ref|ZP_18482205.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425083940|ref|ZP_18487037.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425084750|ref|ZP_18487843.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425094975|ref|ZP_18498055.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428152551|ref|ZP_19000210.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428932821|ref|ZP_19006390.1| GTP-binding protein [Klebsiella pneumoniae JHCK1]
gi|428940120|ref|ZP_19013213.1| GTP-binding protein [Klebsiella pneumoniae VA360]
gi|449059704|ref|ZP_21737390.1| GTP-binding protein [Klebsiella pneumoniae hvKP1]
gi|150957528|gb|ABR79558.1| GTP-binding elongation factor family protein [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|238544600|dbj|BAH60951.1| GTP-binding elongation factor family protein [Klebsiella pneumoniae
subsp. pneumoniae NTUH-K2044]
gi|259041008|gb|EEW42086.1| glutathione-disulfide reductase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|339764437|gb|AEK00658.1| GTP-binding protein [Klebsiella pneumoniae KCTC 2242]
gi|363648191|gb|EHL87374.1| GTP-binding protein TypA/BipA [Klebsiella sp. 4_1_44FAA]
gi|364515599|gb|AEW58727.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|397343539|gb|EJJ36684.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397344031|gb|EJJ37169.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397348369|gb|EJJ41470.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397360560|gb|EJJ53236.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397361969|gb|EJJ54624.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397366453|gb|EJJ59070.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397375407|gb|EJJ67698.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397379939|gb|EJJ72129.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397386725|gb|EJJ78794.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397394180|gb|EJJ85916.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397396257|gb|EJJ87951.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397404172|gb|EJJ95692.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397411102|gb|EJK02366.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397411683|gb|EJK02933.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397421236|gb|EJK12261.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397428170|gb|EJK18916.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397432894|gb|EJK23549.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397437141|gb|EJK27712.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397444666|gb|EJK34933.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397450492|gb|EJK40596.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|397741626|gb|EJK88847.1| glutathione-disulfide reductase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|402544029|gb|AFQ68178.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405589102|gb|EKB62690.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405597860|gb|EKB71108.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405608753|gb|EKB81692.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405609179|gb|EKB82059.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407805211|gb|EKF76462.1| GTP-binding protein [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|410113710|emb|CCM84691.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410119658|emb|CCM90121.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414710587|emb|CCN32291.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426302820|gb|EKV65009.1| GTP-binding protein [Klebsiella pneumoniae VA360]
gi|426306731|gb|EKV68828.1| GTP-binding protein [Klebsiella pneumoniae JHCK1]
gi|427537416|emb|CCM96348.1| GTP-binding protein TypA/BipA [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|448874589|gb|EMB09630.1| GTP-binding protein [Klebsiella pneumoniae hvKP1]
Length = 607
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDRVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDVAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRKRAM 601
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|429829128|ref|ZP_19360105.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0109]
gi|429250595|gb|EKY35247.1| GTP-binding protein TypA/BipA [Escherichia coli 96.0109]
Length = 607
Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAV ++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVVFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|423122892|ref|ZP_17110576.1| GTP-binding protein typA/BipA [Klebsiella oxytoca 10-5246]
gi|376391826|gb|EHT04494.1| GTP-binding protein typA/BipA [Klebsiella oxytoca 10-5246]
Length = 607
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 TIVDRVPAPNVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETPDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRAGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|410629881|ref|ZP_11340576.1| GTP-binding protein TypA/BipA [Glaciecola arctica BSs20135]
gi|410150504|dbj|GAC17443.1| GTP-binding protein TypA/BipA [Glaciecola arctica BSs20135]
Length = 612
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I++N
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTLESRGVAEERVMDSNDIEKERGITILAKNTAIKWNEY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP WV+D FDLFD L AT++QLDF V+Y SA++G+A + NM PLFE
Sbjct: 135 KIDKPGARPGWVIDQVFDLFDNLGATDDQLDFEVVYASAINGWATNDLDVPSDNMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K+V + + PLQ+QI L+Y+SY+G IGIGRI SG +K Q V I+ G + K
Sbjct: 195 TIIKHVKPPVADMHGPLQMQISQLDYNSYVGVIGIGRITSGSVKPNQQVTII-GANGKTR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AKI Q++ + GL R+ V+ +GDIV ITG+ E+ I T+CDPS LP L++DEPT+
Sbjct: 254 NAKIGQVQGYLGLQRLEVDSGDAGDIVAITGVGELKISDTVCDPSAVVALPPLSVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP G+EGK++T+R I RL E+ +N+ L+V + + D + VSGRGELHL
Sbjct: 314 TMTFQVNNSPFCGKEGKYVTSRNIYERLQTELIHNVALKVEETQDPDK-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI K ++G +EP+E + +D+EE +QG IM+++ R G+L
Sbjct: 373 GILIENMRREGYELAVSRPEVILKQVDGVTHEPFETVTIDVEEKHQGTIMEQIGTRKGEL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVR+++ IPSRGLIGFQ +F+T+T G+GLI H F+ Y P +G+R
Sbjct: 433 TNMSPDGKGRVRMDFMIPSRGLIGFQTDFMTMTSGSGLIYHTFDHYGPHKGGQ---IGQR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ RGRLFI H VYEGM+IGIH+R+NDL VN +K KQL
Sbjct: 490 KNGVLIANATGKALTNALFNLQSRGRLFIGHGVEVYEGMVIGIHARENDLTVNALKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PI ++LE A+EFI++DELVE+TP + R+RK+ L EN RK+
Sbjct: 550 TNVRASGTDEAQSLVPPIVMSLEQALEFIDNDELVEVTPLSTRIRKKLLTENLRKQ 605
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLESRGVAEERVMDSNDIEKERGITILAKNTAIKWNE 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 133
Query: 176 NKIDK 180
NKIDK
Sbjct: 134 NKIDK 138
>gi|421542918|ref|ZP_15989020.1| translation initiation factor IF-2 [Neisseria meningitidis NM255]
gi|402316181|gb|EJU51731.1| translation initiation factor IF-2 [Neisseria meningitidis NM255]
Length = 962
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/539 (62%), Positives = 438/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI++SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFINVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE L G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQLTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFEC 934
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|354725740|ref|ZP_09039955.1| GTP-binding protein [Enterobacter mori LMG 25706]
Length = 607
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/598 (56%), Positives = 452/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ VP + + LQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDRVPAPNVDLDGTLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP K LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDIAEAGDIIAITGLGELNISDTICDPQKVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETPDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKRAM 601
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|269959430|ref|ZP_06173813.1| GTP-binding protein typA/bipA [Vibrio harveyi 1DA3]
gi|424048304|ref|ZP_17785858.1| GTP-binding protein TypA/BipA [Vibrio cholerae HENC-03]
gi|269835867|gb|EEZ89943.1| GTP-binding protein typA/bipA [Vibrio harveyi 1DA3]
gi|408882939|gb|EKM21734.1| GTP-binding protein TypA/BipA [Vibrio cholerae HENC-03]
Length = 609
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWAALEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVEEVTAPQVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GLDR V +A +GDIV ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLDRHEVEQANAGDIVAITGLGELKISDTICAQNAVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFEMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLIANAMGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PIK+TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIKMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|29143912|ref|NP_807254.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|29139548|gb|AAO71114.1| GTP-binding protein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 607
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN S G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSSFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PIK++LE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVILVPPIKMSLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|315633770|ref|ZP_07889060.1| glutathione-disulfide reductase [Aggregatibacter segnis ATCC 33393]
gi|315477812|gb|EFU68554.1| glutathione-disulfide reductase [Aggregatibacter segnis ATCC 33393]
Length = 616
Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/597 (57%), Positives = 445/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + + + R+MDSN+IE+ERGITI +KN +I +NG
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFDATRGDADERVMDSNDIERERGITILAKNTAINWNG 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDCVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLFD L AT+EQLDFP+IY SAL+G A +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFDNLGATDEQLDFPIIYASALNGVAGLEHDDLAADMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K N P Q+QI L+Y+SY+G IG+GRI G +K Q V I++ K
Sbjct: 194 EAIVKYVEPPKVELNAPFQMQISQLDYNSYVGVIGVGRIKRGTVKPNQSVTIIDSF-GKA 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RNGKIGQVLGHLGLQRYEEDIASAGDIVAITGLGELNISDTICDINNVEALPALTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIFKEVDGHKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 432 VKDMVPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+LW LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALAYALWGLQERGKLMIDHGAEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +PIK++LE AIEFI+DDELVEITP++IR+RK+ L E +RK+
Sbjct: 549 LTNMRASGKDDAIALTTPIKLSLEQAIEFIDDDELVEITPQSIRIRKKLLTETDRKR 605
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 105/257 (40%), Gaps = 48/257 (18%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + F G I A N N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFDATRGDADERVMDSNDIERERGITILAKNTAINWN 72
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 GYRINIVDTPGHADFGGEVERVLSMVDCVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDKLDINLDRIKQDLISEQVIP--EEYGGAS-----PFISISAKTGVGINKLLENIS 227
INK+D+ + D + +QV + G P I SA GV LE+
Sbjct: 133 INKVDR-----PGARPDWVVDQVFDLFDNLGATDEQLDFPIIYASALNGVA---GLEHDD 184
Query: 228 LQAEILEL-----------KAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVV 276
L A++ L K + P + I + + G + I+ GT++ + V
Sbjct: 185 LAADMTPLFEAIVKYVEPPKVELNAPFQMQISQLDYNSYVGVIGVGRIKRGTVKPNQSVT 244
Query: 277 AGASYGRIRSMLNENGK 293
S+G+ R NGK
Sbjct: 245 IIDSFGKAR-----NGK 256
>gi|421538386|ref|ZP_15984562.1| translation initiation factor IF-2 [Neisseria meningitidis 93003]
gi|421544937|ref|ZP_15991005.1| translation initiation factor IF-2 [Neisseria meningitidis NM140]
gi|421547025|ref|ZP_15993065.1| translation initiation factor IF-2 [Neisseria meningitidis NM183]
gi|421549272|ref|ZP_15995290.1| translation initiation factor IF-2 [Neisseria meningitidis NM2781]
gi|421553231|ref|ZP_15999197.1| translation initiation factor IF-2 [Neisseria meningitidis NM576]
gi|433469764|ref|ZP_20427176.1| translation initiation factor IF-2 [Neisseria meningitidis 98080]
gi|254671947|emb|CBA04331.1| translation initiation factor IF-2 [Neisseria meningitidis
alpha275]
gi|402316413|gb|EJU51958.1| translation initiation factor IF-2 [Neisseria meningitidis 93003]
gi|402322224|gb|EJU57689.1| translation initiation factor IF-2 [Neisseria meningitidis NM183]
gi|402322430|gb|EJU57891.1| translation initiation factor IF-2 [Neisseria meningitidis NM140]
gi|402324662|gb|EJU60094.1| translation initiation factor IF-2 [Neisseria meningitidis NM2781]
gi|402328542|gb|EJU63910.1| translation initiation factor IF-2 [Neisseria meningitidis NM576]
gi|432202016|gb|ELK58085.1| translation initiation factor IF-2 [Neisseria meningitidis 98080]
Length = 962
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 448/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|121635283|ref|YP_975528.1| translation initiation factor IF-2 [Neisseria meningitidis FAM18]
gi|416177053|ref|ZP_11609904.1| translation initiation factor IF-2 [Neisseria meningitidis M6190]
gi|416191027|ref|ZP_11616000.1| translation initiation factor IF-2 [Neisseria meningitidis ES14902]
gi|433493026|ref|ZP_20450114.1| translation initiation factor IF-2 [Neisseria meningitidis NM586]
gi|433495142|ref|ZP_20452206.1| translation initiation factor IF-2 [Neisseria meningitidis NM762]
gi|433503359|ref|ZP_20460318.1| translation initiation factor IF-2 [Neisseria meningitidis NM126]
gi|166232564|sp|A1KV51.1|IF2_NEIMF RecName: Full=Translation initiation factor IF-2
gi|120866989|emb|CAM10752.1| initiation factor IF2 [Neisseria meningitidis FAM18]
gi|325132773|gb|EGC55455.1| translation initiation factor IF-2 [Neisseria meningitidis M6190]
gi|325138674|gb|EGC61229.1| translation initiation factor IF-2 [Neisseria meningitidis ES14902]
gi|432226959|gb|ELK82675.1| translation initiation factor IF-2 [Neisseria meningitidis NM586]
gi|432228884|gb|ELK84578.1| translation initiation factor IF-2 [Neisseria meningitidis NM762]
gi|432239601|gb|ELK95151.1| translation initiation factor IF-2 [Neisseria meningitidis NM126]
Length = 962
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 448/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|345301532|ref|YP_004830890.1| GTP-binding protein TypA [Enterobacter asburiae LF7a]
gi|345095469|gb|AEN67105.1| GTP-binding protein TypA [Enterobacter asburiae LF7a]
Length = 607
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ VP + + LQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDRVPAPSVDLDGTLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDVAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETPDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|392553065|ref|ZP_10300202.1| GTP-binding protein TypA [Pseudoalteromonas spongiae UST010723-006]
Length = 608
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN+IEKERGITI +KN +IE+N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAIEWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT+KA LG KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFALGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT++QLDF VIY SA++G+A + + NM P+FE
Sbjct: 130 KIDKPGARPDWVMDQVFDLFDNLGATDDQLDFQVIYASAINGWATLDLDSPSDNMQPMFE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + Q+QI L+Y+SY+G IG+GRI G +K Q V I+ G D
Sbjct: 190 AIVDQVEKPDADPEGAFQMQISQLDYNSYIGVIGVGRIKRGTVKVNQQVTIV-GADGSKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR +A +GDI+ ITG+ E+ I T+CD ++ LP L++DEPT+
Sbjct: 249 NGKVGQVLTYLGLDRHEAEQAQAGDIIAITGLGELKISDTVCDVNQVEALPALSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP +G+EGKF+T+R I RL E+ +N+ LRV + + DS + VSGRGELHL
Sbjct: 309 TMTFSVNTSPFSGQEGKFVTSRNILERLQAELVHNVALRVEETDNPDS-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI + ++G+L EPYE + VD+EE +QG IM++L R ++
Sbjct: 368 GILIENMRREGYELAVSRPEVILREVDGQLEEPYETVTVDVEEEHQGSIMEQLGLRKAEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R+R+++ +PSRGLIGFQ +F+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 428 TDMAPDGKGRIRMDFMMPSRGLIGFQTDFMTLTSGSGLMYHTFDHYGPHKGG---NIGQR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQDRG+LFI H VYEGMIIGIH+RDNDL VN +K KQL
Sbjct: 485 KNGVLIANATGKALTNALFNLQDRGKLFIGHGVEVYEGMIIGIHARDNDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PI ++LE A+EFI+DDELVE+TP++IR+RK+ L E+ERK+
Sbjct: 545 TNVRASGTDEAQNLVPPIIMSLEQALEFIDDDELVEVTPESIRIRKKLLTESERKR 600
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAIEWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFALGLKPIVVI 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|421565962|ref|ZP_16011726.1| translation initiation factor IF-2 [Neisseria meningitidis NM3081]
gi|402342355|gb|EJU77522.1| translation initiation factor IF-2 [Neisseria meningitidis NM3081]
Length = 962
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 448/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMIKGYNEIM-EGDQLECFDI 955
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|418288810|ref|ZP_12901240.1| translation initiation factor IF-2 [Neisseria meningitidis NM233]
gi|418291072|ref|ZP_12903134.1| translation initiation factor IF-2 [Neisseria meningitidis NM220]
gi|372200525|gb|EHP14590.1| translation initiation factor IF-2 [Neisseria meningitidis NM220]
gi|372200985|gb|EHP14969.1| translation initiation factor IF-2 [Neisseria meningitidis NM233]
Length = 962
Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 448/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|260221431|emb|CBA29988.1| Translation initiation factor IF-2 [Curvibacter putative symbiont
of Hydra magnipapillata]
Length = 982
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/539 (62%), Positives = 437/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M++K+S VIK LMKLGQMVTINQ LDQ+TAMI+VEE+GH A + L+DPE+F +E
Sbjct: 417 MAIKASEVIKQLMKLGQMVTINQPLDQDTAMIVVEELGHKAVVAALDDPEAFTDDEVQGQ 476
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A SL RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ++F
Sbjct: 477 -EAPSLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGMVSF 535
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVPL+VAI K DK
Sbjct: 536 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPLVVAITKSDK 595
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L+ E+V+PEEYGG SPF+ +S+KTG+GI+ LLE + LQAE+LELKAPV
Sbjct: 596 PDANPDRVKQELVVEEVVPEEYGGDSPFVPVSSKTGMGIDALLEQVLLQAEVLELKAPVD 655
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVAT+L+QSGTL+ D+V+AG +YGR+R+ML+ENG I AGP
Sbjct: 656 AMAKGLVIEAKLDKGRGPVATMLVQSGTLKVGDVVLAGQTYGRVRAMLDENGHKIETAGP 715
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF+DI
Sbjct: 716 SIPVEIQGLTEVPQAGDEFMVLTDERRAREIATYRAGKFRNTKLAKQQAAKLENMFSDIG 775
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
VK L II+K DV GS+E L +SL LSTD+VK+Q++++AVG I+ESDINLAIASKAI
Sbjct: 776 AGDVKMLPIIVKADVQGSQEALAQSLLKLSTDEVKVQMVYSAVGGISESDINLAIASKAI 835
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN RADA RKLA+ N ++IRY+NIIY+ + E+K+ ++ ++ EK+E ++G+AEIR
Sbjct: 836 VIGFNTRADAGARKLAEGNGVDIRYYNIIYDAVDELKAAMSGMLAPEKREEVIGMAEIRT 895
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AGC + G + R++ R+LR+ +I+TGELDSLKR KD+V+EVK GFEC
Sbjct: 896 VFVASKIGTVAGCMVTNGFVTRNAHFRLLRDNVVIYTGELDSLKRMKDDVREVKEGFEC 954
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 489 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGMVSF------------ 535
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A G +V + K
Sbjct: 536 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPLVVAITK 592
Query: 1047 IDRSNARPE 1055
D+ +A P+
Sbjct: 593 SDKPDANPD 601
>gi|433497315|ref|ZP_20454346.1| translation initiation factor IF-2 [Neisseria meningitidis M7089]
gi|433499408|ref|ZP_20456414.1| translation initiation factor IF-2 [Neisseria meningitidis M7124]
gi|433501345|ref|ZP_20458328.1| translation initiation factor IF-2 [Neisseria meningitidis NM174]
gi|432232491|gb|ELK88135.1| translation initiation factor IF-2 [Neisseria meningitidis M7089]
gi|432233251|gb|ELK88882.1| translation initiation factor IF-2 [Neisseria meningitidis M7124]
gi|432234124|gb|ELK89746.1| translation initiation factor IF-2 [Neisseria meningitidis NM174]
Length = 962
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 448/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLHIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|374263726|ref|ZP_09622273.1| virulence regulator BipA [Legionella drancourtii LLAP12]
gi|363535848|gb|EHL29295.1| virulence regulator BipA [Legionella drancourtii LLAP12]
Length = 607
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/596 (57%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+Q+GT + R+MDSN +EKERGITI +KN + +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERMMDSNALEKERGITILAKNTCVYWNNH 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIVV+N
Sbjct: 69 QINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLHPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WV+D FDLFD L AT+ QLDFPV+Y SAL+GYA N + +M L +
Sbjct: 129 KIDRPGARPHWVMDQVFDLFDNLGATDAQLDFPVVYASALNGYAKLNLEDEATDMSALLQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V K ++ P Q+QI SL+YSSY+G IGIGRI G IK+ V I++ D
Sbjct: 189 TIIDKVEPPKVDAEGPFQMQISSLDYSSYVGTIGIGRISRGHIKAKSPVKIID-KDGNIR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ FKGL+RV + EA +G+IV ITGIE + I T+CDP+ GLP L++DEPT+
Sbjct: 248 TGRLLQLLGFKGLERVEIEEASAGNIVAITGIEGLKISDTVCDPAMVEGLPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R+I+ RLD E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGQEGKFVTSRKIRERLDTELLHNVALRVDDCEDPDK-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREGYEL++S+P VI + ++GE EPYE L VD+EE +QG IM+KL R G++
Sbjct: 367 SILIETMRREGYELAISKPEVIIREIDGEQQEPYERLTVDVEENHQGSIMEKLGERRGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y +P+RGLIGF NEF++ T GTGL+ HV++ Y P K +GKR
Sbjct: 427 QDMVPDGKGRVRLDYIVPTRGLIGFHNEFLSSTSGTGLMYHVYDHYGPAI---KGRIGKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS G A ++L+ LQDRGRLF+ + YEGM++GIH+RDNDL+VN KEKQL
Sbjct: 484 ANGVLISNCQGIARGFALFNLQDRGRLFVEPQTVCYEGMVVGIHARDNDLVVNVTKEKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DE I L PIK+TLE A+EFI+DDELVE+TP++IR+RK+ LKE+ERKK
Sbjct: 544 TNMRASGTDENIILTPPIKLTLEQALEFIDDDELVEVTPESIRIRKKALKEHERKK 599
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + +E GIT V N+
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERMMDSNALEKERGITILAKNTCVYWNN 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 HQINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLHPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|421559663|ref|ZP_16005533.1| translation initiation factor IF-2 [Neisseria meningitidis 92045]
gi|402334780|gb|EJU70057.1| translation initiation factor IF-2 [Neisseria meningitidis 92045]
Length = 962
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 447/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMLKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|378823630|ref|ZP_09846240.1| translation initiation factor IF-2 [Sutterella parvirubra YIT
11816]
gi|378597550|gb|EHY30828.1| translation initiation factor IF-2 [Sutterella parvirubra YIT
11816]
Length = 953
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/539 (61%), Positives = 430/539 (79%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LM +GQMVTINQ+LDQ+TAM++VEEMGH A A+K +DPE+ LL E +
Sbjct: 388 MSVKATEVIKTLMLMGQMVTINQMLDQDTAMLVVEEMGHKAFAAKADDPEA-LLGELAEQ 446
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
L R P+VTIMGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G +TF
Sbjct: 447 EHFPELPRPPVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVKTPRGIVTF 506
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI+HA+ +GVPL+VAINKIDK
Sbjct: 507 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAISHARAAGVPLVVAINKIDK 566
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N DR+KQ+L++ +V+PEE+GG PF +SAKTG G+++LLEN+ LQAE+LELKAPV
Sbjct: 567 PEANPDRVKQELVANEVMPEEWGGDVPFCPVSAKTGQGVDELLENVLLQAEMLELKAPVE 626
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
A+G++IESRLDKG+GPVA++L+QSGTL D+V+ G +GR+R+M+NE GK AGP
Sbjct: 627 GRARGLVIESRLDKGRGPVASILVQSGTLHRGDVVLVGQEFGRVRAMINELGKAQNTAGP 686
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +G+E+ V+ +E+KAREI LFRQG++RDVKL+K N+F+D+
Sbjct: 687 SIPVEIQGLSGVPGAGDEVIVLNDERKAREIALFRQGQYRDVKLAKAHATNLANLFSDVG 746
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK DV GS+E L +L LSTD+V++ V+H AVG I+ESD+NLA ASK +
Sbjct: 747 EGEVKTLPLIIKADVQGSQEALIHALTKLSTDEVRVSVVHAAVGGISESDVNLAAASKGV 806
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
I+GFNVRADA RKLA+ I+IRY+NIIY+ + ++K+ + ++ E +E +GL EIRQ
Sbjct: 807 ILGFNVRADAQARKLAENEGIDIRYYNIIYDAVDDVKAALGGMLSPEVRETPIGLVEIRQ 866
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+I V KV IAGC +LEG +RR++ +R+LR+ +IWTGEL SLK FKD+V+EVKAG EC
Sbjct: 867 IIRVPKVGNIAGCRVLEGAVRRNASVRLLRDNVVIWTGELASLKHFKDDVREVKAGNEC 925
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+L+D++ R + I I + ++ RGI F
Sbjct: 460 IMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVKTPRGIVTF------------ 506
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ A G +V +NK
Sbjct: 507 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAISHARAAGVPLVVAINK 563
Query: 1047 IDRSNARPEWV 1057
ID+ A P+ V
Sbjct: 564 IDKPEANPDRV 574
>gi|160871673|ref|ZP_02061805.1| GTP-binding protein TypA/BipA [Rickettsiella grylli]
gi|159120472|gb|EDP45810.1| GTP-binding protein TypA/BipA [Rickettsiella grylli]
Length = 604
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/596 (58%), Positives = 441/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT RIMDSN++E+ERGITI +KN SI + G
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLSSRAATVDRIMDSNDLERERGITILAKNTSITWQGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFAKGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +ARP+WVV+ FDLFD+L ATEEQLDFP+IY SAL GYA + K ++ PLFE
Sbjct: 129 KIDRPSARPDWVVNQVFDLFDRLGATEEQLDFPIIYASALQGYATLDLKNPSSHLDPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + Q+QI +L+YSSY+G IGIGRI G ++ V +++ + K
Sbjct: 189 TIINKVNPPRVDPEGGFQMQITTLDYSSYVGTIGIGRIQRGCAQANMPVTLIDR-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
A+I QI + GL+R+ + A +GDIV ITGI+ + I T+CDP LP L +DEPT+
Sbjct: 248 SARILQILGYHGLERIEIEHAQAGDIVAITGIDTLNISDTLCDPHFVEALPALIVDEPTM 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG++GKF+T+RQIK RLD E+ +N+ L+V ++ D + + VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGKDGKFVTSRQIKERLDKELLHNVALKV-EDTDDPNRFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREGYEL VSRP VI K ++GEL EPYENL VD+EE +QG IM+KL R GDL
Sbjct: 367 SILIETMRREGYELGVSRPEVILKEIDGELKEPYENLTVDLEEQHQGPIMEKLGSRRGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + RVRL+Y+IP+R L GF+ EF+T T G GL+ HVF Y P K L R
Sbjct: 427 LDMIADGNGRVRLDYKIPTRALFGFRTEFLTATSGLGLMHHVFCHYGPL---KKGTLASR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL++ GK+ +SL+ LQ+RG+L I VYEGMI+GIHSRDNDL+VN +K KQL
Sbjct: 484 VNGVLVANQLGKSTGFSLFNLQERGKLLIGPQTDVYEGMIVGIHSRDNDLVVNVVKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSDE I L P+ +LE A+EFI DDEL+E+TP ++RLRK+FLKE+ERK+
Sbjct: 544 TNVRASGSDENIILTPPLTFSLEQALEFIADDELLEVTPHSLRLRKKFLKEHERKR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + + + S I N ++ + SIT+
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLSSRAATVDRIMDSNDLERERGITILAKNTSITWQG 67
Query: 121 -----LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+DTPGH F R + D V+L+V A DG MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFAKGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|416212429|ref|ZP_11621892.1| translation initiation factor IF-2 [Neisseria meningitidis
M01-240013]
gi|325144891|gb|EGC67178.1| translation initiation factor IF-2 [Neisseria meningitidis
M01-240013]
Length = 962
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 448/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|421555329|ref|ZP_16001263.1| translation initiation factor IF-2 [Neisseria meningitidis 98008]
gi|389605270|emb|CCA44190.1| translation initiation factor IF-2 [Neisseria meningitidis
alpha522]
gi|402330843|gb|EJU66187.1| translation initiation factor IF-2 [Neisseria meningitidis 98008]
Length = 962
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 448/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|385340498|ref|YP_005894370.1| translation initiation factor IF-2 [Neisseria meningitidis G2136]
gi|433467723|ref|ZP_20425174.1| translation initiation factor IF-2 [Neisseria meningitidis 87255]
gi|325198742|gb|ADY94198.1| translation initiation factor IF-2 [Neisseria meningitidis G2136]
gi|432201834|gb|ELK57908.1| translation initiation factor IF-2 [Neisseria meningitidis 87255]
Length = 962
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 447/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMLKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|385323747|ref|YP_005878186.1| translation initiation factor IF-2 [Neisseria meningitidis 8013]
gi|261392134|emb|CAX49634.1| translation initiation factor IF-2 [Neisseria meningitidis 8013]
Length = 962
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 447/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMLKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|15677492|ref|NP_274648.1| translation initiation factor IF-2 [Neisseria meningitidis MC58]
gi|385852759|ref|YP_005899273.1| translation initiation factor IF-2 [Neisseria meningitidis H44/76]
gi|416195776|ref|ZP_11617852.1| translation initiation factor IF-2 [Neisseria meningitidis CU385]
gi|427827152|ref|ZP_18994195.1| translation initiation factor IF-2 [Neisseria meningitidis H44/76]
gi|433465617|ref|ZP_20423091.1| translation initiation factor IF-2 [Neisseria meningitidis NM422]
gi|433488820|ref|ZP_20445974.1| translation initiation factor IF-2 [Neisseria meningitidis M13255]
gi|433491004|ref|ZP_20448121.1| translation initiation factor IF-2 [Neisseria meningitidis NM418]
gi|433505488|ref|ZP_20462423.1| translation initiation factor IF-2 [Neisseria meningitidis 9506]
gi|433507633|ref|ZP_20464536.1| translation initiation factor IF-2 [Neisseria meningitidis 9757]
gi|433509797|ref|ZP_20466658.1| translation initiation factor IF-2 [Neisseria meningitidis 12888]
gi|433511833|ref|ZP_20468651.1| translation initiation factor IF-2 [Neisseria meningitidis 4119]
gi|32129612|sp|Q9JYD2.1|IF2_NEIMB RecName: Full=Translation initiation factor IF-2
gi|7226893|gb|AAF41992.1| translation initiation factor IF-2 [Neisseria meningitidis MC58]
gi|316984985|gb|EFV63939.1| translation initiation factor IF-2 [Neisseria meningitidis H44/76]
gi|325140712|gb|EGC63226.1| translation initiation factor IF-2 [Neisseria meningitidis CU385]
gi|325199763|gb|ADY95218.1| translation initiation factor IF-2 [Neisseria meningitidis H44/76]
gi|432201579|gb|ELK57658.1| translation initiation factor IF-2 [Neisseria meningitidis NM422]
gi|432222005|gb|ELK77806.1| translation initiation factor IF-2 [Neisseria meningitidis M13255]
gi|432226262|gb|ELK81994.1| translation initiation factor IF-2 [Neisseria meningitidis NM418]
gi|432239804|gb|ELK95349.1| translation initiation factor IF-2 [Neisseria meningitidis 9506]
gi|432240179|gb|ELK95720.1| translation initiation factor IF-2 [Neisseria meningitidis 9757]
gi|432245507|gb|ELL00976.1| translation initiation factor IF-2 [Neisseria meningitidis 12888]
gi|432246085|gb|ELL01544.1| translation initiation factor IF-2 [Neisseria meningitidis 4119]
Length = 962
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 448/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAINDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|433537125|ref|ZP_20493626.1| translation initiation factor IF-2 [Neisseria meningitidis 77221]
gi|432272486|gb|ELL27594.1| translation initiation factor IF-2 [Neisseria meningitidis 77221]
Length = 958
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 448/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 393 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 451
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 452 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 511
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 512 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 571
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 572 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLHIDALLEAVLLEAEVLELTAPVD 631
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 632 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 691
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 692 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 751
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 752 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 811
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 812 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 871
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 872 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 931
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 932 LMLKGYNEIM-EGDQLECFDI 951
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 465 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 511
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 512 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 568
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 569 IDKEAANPERI 579
>gi|402841931|ref|ZP_10890364.1| GTP-binding protein TypA [Klebsiella sp. OBRC7]
gi|402281543|gb|EJU30174.1| GTP-binding protein TypA [Klebsiella sp. OBRC7]
Length = 607
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/598 (55%), Positives = 450/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I+N + K
Sbjct: 189 TIVDRVPAPNVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIINS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDVAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETPDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRAGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|339483479|ref|YP_004695265.1| translation initiation factor IF-2 [Nitrosomonas sp. Is79A3]
gi|338805624|gb|AEJ01866.1| translation initiation factor IF-2 [Nitrosomonas sp. Is79A3]
Length = 882
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/539 (61%), Positives = 442/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK LMK+G MVTINQ+LDQ+TAMI+VEEMGH+A ++L++PE+FL++ +
Sbjct: 318 MSVKAADVIKVLMKMGSMVTINQMLDQDTAMIVVEEMGHIAKYAELDNPENFLVDRETSD 377
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ E + RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T+HG ITF
Sbjct: 378 VELELVPRAPVVTVMGHVDHGKTSLLDYIRRTRVAGGEAGGITQHIGAYHVETDHGMITF 437
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARG K+TDIV+LVVAADDGVMPQT EAI HAK + +P+IVA+NKIDK
Sbjct: 438 LDTPGHEAFTAMRARGTKITDIVILVVAADDGVMPQTVEAIHHAKAAKIPIIVAMNKIDK 497
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +RI+ +L++ V+PE++GG + F+ +SAKTG G++ LLE+I LQAE+LELKAP+
Sbjct: 498 PEANAERIRHELVANAVVPEDWGGDTMFVEVSAKTGQGVDSLLESILLQAEVLELKAPIN 557
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
TPAKGV+IESRLDKG+GPVAT+L+QSGTL+ D+++AGA +G++R+M +E GK+I +AG
Sbjct: 558 TPAKGVVIESRLDKGRGPVATILVQSGTLKRGDVLLAGAVFGKVRAMNDETGKSIKQAGT 617
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++VP +GE +FV+ +E+KAREI LFRQGK+RDVK +KQ+ K EN+F+
Sbjct: 618 SIPVEIQGLSEVPEAGEFVFVLDDERKAREIALFRQGKYRDVKFAKQQAAKLENVFD--Q 675
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ VK L +IIK DV GS E L +L LSTD+VK+ +IH+ VG I ESD+NL++ASKA+
Sbjct: 676 QADVKVLALIIKADVQGSCEALAYALHKLSTDEVKVNIIHSGVGAIIESDVNLSLASKAV 735
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKL + +++RY+NIIY + EIK+ ++ ++ ++KE++ GL EIR+
Sbjct: 736 IIGFNVRADASARKLIASSGVDVRYYNIIYEAVDEIKAALSGMMSPDRKESIQGLVEIRE 795
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ + KV +AGCY+ EG+I+R+S IR+LR+ +I + ELDSLKRFKD+VKEV+ GFEC
Sbjct: 796 IYRIPKVGIVAGCYVSEGIIKRNSLIRVLRDGLVIHSCELDSLKRFKDDVKEVREGFEC 854
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R R+ + GIT +E +
Sbjct: 391 VMGHVDHGKTSLLDYIRR------------TRVAGG----EAGGITQHIGAYHVETDHGM 434
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGH F R + D V+L++ A +G MPQT A IV +NK
Sbjct: 435 ITFLDTPGHEAFTAMRARGTKITDIVILVVAADDGVMPQTVEAIHHAKAAKIPIIVAMNK 494
Query: 1047 IDRSNARPEWV 1057
ID+ A E +
Sbjct: 495 IDKPEANAERI 505
>gi|429088773|ref|ZP_19151505.1| GTP-binding protein TypA/BipA [Cronobacter universalis NCTC 9529]
gi|426508576|emb|CCK16617.1| GTP-binding protein TypA/BipA [Cronobacter universalis NCTC 9529]
Length = 607
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/598 (56%), Positives = 452/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLGHLGLERIDTDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP ++R+RKR L ENERK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSVRIRKRHLTENERKRAM 601
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|416186881|ref|ZP_11613988.1| translation initiation factor IF-2 [Neisseria meningitidis M0579]
gi|325136707|gb|EGC59307.1| translation initiation factor IF-2 [Neisseria meningitidis M0579]
Length = 962
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 447/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMLKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|304386888|ref|ZP_07369150.1| translation initiation factor IF2 [Neisseria meningitidis ATCC
13091]
gi|304339047|gb|EFM05139.1| translation initiation factor IF2 [Neisseria meningitidis ATCC
13091]
Length = 962
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|261364310|ref|ZP_05977193.1| translation initiation factor IF-2 [Neisseria mucosa ATCC 25996]
gi|288567564|gb|EFC89124.1| translation initiation factor IF-2 [Neisseria mucosa ATCC 25996]
Length = 972
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 407 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGVEA 465
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 466 AEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 525
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 526 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 585
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 586 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGINIDALLEAVLLEAEVLELTAPVD 645
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK + EAGP
Sbjct: 646 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAVNEAGP 705
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 706 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 765
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L+ SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 766 ENQAQSLSVIIKADVQGSYEALSGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 825
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G+ EIRQ
Sbjct: 826 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQITGMVEIRQ 885
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 886 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 945
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 946 LMIKGYNEIMEG-DQLECFDI 965
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 479 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 525
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 526 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 582
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 583 IDKEAANPERI 593
>gi|330004709|ref|ZP_08305008.1| GTP-binding protein TypA [Klebsiella sp. MS 92-3]
gi|328536534|gb|EGF62870.1| GTP-binding protein TypA [Klebsiella sp. MS 92-3]
Length = 607
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/598 (55%), Positives = 450/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIFDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDRVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDVAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRKRAM 601
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIFDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|399154879|ref|ZP_10754946.1| GTP-binding protein TypA [gamma proteobacterium SCGC AAA007-O20]
Length = 603
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/597 (56%), Positives = 446/597 (74%), Gaps = 7/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QS TF R+MDSN++EKERGITI SKN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSQTFDDRFQATERMMDSNDLEKERGITISSKNTAIKWGDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA + G PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFEQGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +ARP+WV+D FDLFD+L ATEEQLDFPVIY SAL GYA+E+ R+GNM P+FE
Sbjct: 129 KIDRPSARPDWVIDQVFDLFDQLGATEEQLDFPVIYASALGGYASEDDGVREGNMTPMFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKS-LQDVVIMNGPDDKP 1164
I+ VP + + P Q+QI +L+YSS++G IGIGRI G K+ +Q+V++ + D
Sbjct: 189 VIVNKVPAPSVDLDGPFQMQITALDYSSFVGAIGIGRIERGIAKTNVQNVLVAS--DGSK 246
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ F GL+R V+ A +GDIV I GIE I I TICD SK LP L+IDEPT
Sbjct: 247 RNVKIAQLLGFNGLERYEVSSANAGDIVGIVGIENISISDTICDSSKVEDLPPLSIDEPT 306
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VN+SP AG +GK+IT+R I+ RLD E+ N+ LRV +N D S + VSGRGELH
Sbjct: 307 VSMAFRVNDSPFAGLDGKYITSRNIRERLDKELIYNVALRV-ENTEDSSEFLVSGRGELH 365
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L+ILIE MRREG+ELSV RP+VI K + G+ EP+E+L VD+E ++QG +M+KL R +
Sbjct: 366 LSILIETMRREGFELSVGRPQVILKEIEGKTCEPFEDLTVDVESVHQGSVMEKLGERKAE 425
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RV+L++ IP+RGLIGF+ EF+T T GTGL+ F+ Y P + +G+
Sbjct: 426 LTNMTPDGKGRVKLDFIIPARGLIGFRTEFLTATTGTGLMYSTFDSYRP---QKVGKIGQ 482
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NG LIS GK+VAY+++ LQ G+ F+ H + +YEGM++GI++RD DL++N +K KQ
Sbjct: 483 RTNGSLISMNQGKSVAYAIFNLQKSGKFFVGHGEDIYEGMVVGINTRDKDLVINVMKGKQ 542
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG+DEA+ L I + LE A+EFI+DDELVE+TP NIR+RKR L EN+RK+
Sbjct: 543 LTNVRASGTDEAVALTPKITLDLEQALEFIDDDELVEVTPSNIRIRKRLLTENQRKR 599
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH--------------IGAYNVVTNHGS 117
+ I+ HVDHGKT+L+D + + F + T+ I + N G
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSQTFDDRFQATERMMDSNDLEKERGITISSKNTAIKWGD 67
Query: 118 --ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFEQGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|366158343|ref|ZP_09458205.1| GTP-binding protein [Escherichia sp. TW09308]
gi|432374182|ref|ZP_19617213.1| GTP-binding protein TypA/BipA [Escherichia coli KTE11]
gi|430893604|gb|ELC15928.1| GTP-binding protein TypA/BipA [Escherichia coli KTE11]
Length = 607
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 452/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHENMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIIDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R G+L
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|433473046|ref|ZP_20430410.1| translation initiation factor IF-2 [Neisseria meningitidis 97021]
gi|433481595|ref|ZP_20438860.1| translation initiation factor IF-2 [Neisseria meningitidis 2006087]
gi|433483580|ref|ZP_20440810.1| translation initiation factor IF-2 [Neisseria meningitidis 2002038]
gi|433486782|ref|ZP_20443973.1| translation initiation factor IF-2 [Neisseria meningitidis 97014]
gi|432210647|gb|ELK66603.1| translation initiation factor IF-2 [Neisseria meningitidis 97021]
gi|432217426|gb|ELK73294.1| translation initiation factor IF-2 [Neisseria meningitidis 2006087]
gi|432221000|gb|ELK76816.1| translation initiation factor IF-2 [Neisseria meningitidis 97014]
gi|432221705|gb|ELK77510.1| translation initiation factor IF-2 [Neisseria meningitidis 2002038]
Length = 962
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 447/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|336247964|ref|YP_004591674.1| GTP-binding protein [Enterobacter aerogenes KCTC 2190]
gi|444353929|ref|YP_007390073.1| GTP-binding protein TypA/BipA [Enterobacter aerogenes EA1509E]
gi|334734020|gb|AEG96395.1| GTP-binding protein [Enterobacter aerogenes KCTC 2190]
gi|443904759|emb|CCG32533.1| GTP-binding protein TypA/BipA [Enterobacter aerogenes EA1509E]
Length = 607
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVDRVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDVAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRKRAM 601
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|311281665|ref|YP_003943896.1| GTP-binding protein TypA [Enterobacter cloacae SCF1]
gi|308750860|gb|ADO50612.1| GTP-binding protein TypA [Enterobacter cloacae SCF1]
Length = 607
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/598 (55%), Positives = 450/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIQWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDRVPAPNVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDVAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETPDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRAGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRKRAM 601
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIQWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|317050138|ref|YP_004117786.1| GTP-binding protein TypA [Pantoea sp. At-9b]
gi|316951755|gb|ADU71230.1| GTP-binding protein TypA [Pantoea sp. At-9b]
Length = 606
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHNDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + PLQ+QI L+Y++YLG IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDRVSPPQVEVEAPLQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLGHLGLERIESDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETADADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL+VSRP+VIF+ G EP+EN+ +DIEE +QG +M + R GD+
Sbjct: 367 SVLIENMRREGYELAVSRPKVIFREFEGRKQEPFENVTLDIEETHQGSVMMAMGERKGDM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P+K+TLE AIEFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPVKMTLEQAIEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|308188682|ref|YP_003932813.1| GTP-binding protein TypA [Pantoea vagans C9-1]
gi|308059192|gb|ADO11364.1| GTP-binding protein TypA [Pantoea vagans C9-1]
Length = 607
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+I+ SAL+G A +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIFASALNGIAGLEHTDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + ++ PLQ+QI L+Y++YLG IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVAPPQVEADAPLQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NAKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +DIEE +QG +MQ + R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDIEETHQGSVMQAMGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P K+TLE AIEFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPQKMTLEQAIEFIDDDELVEVTPLSVRIRKRHLTENDRKR 599
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|441506564|ref|ZP_20988532.1| GTP-binding protein TypA/BipA [Photobacterium sp. AK15]
gi|441425770|gb|ELR63264.1| GTP-binding protein TypA/BipA [Photobacterium sp. AK15]
Length = 609
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/609 (56%), Positives = 449/609 (73%), Gaps = 7/609 (1%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
+S+ I L AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI
Sbjct: 1 MSNPQIDKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGEVEERVMDSNDIEKERGITI 60
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+KN +I +N INI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA
Sbjct: 61 LAKNTAINWNDYHINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
G KPIVV+NKIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A +
Sbjct: 121 FAHGLKPIVVINKIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATQEE 180
Query: 1094 KARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
NM PLF+AI+ V + + LQ+QI L+YSSY+G IG+GR+ G +K Q
Sbjct: 181 GETGENMEPLFQAIVDNVAAPDVDVDGSLQMQISQLDYSSYVGVIGVGRVTRGSVKPNQQ 240
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPN 1213
V ++ G D K K+ + + GL+R V EA +GDI+ ITG+ E+ I TICD +
Sbjct: 241 VTVV-GADGKTRNGKVGTVLGYLGLERHEVEEATAGDIIAITGLGELKISDTICDVNAVE 299
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
LP L++DEPT+T+ F VN SP AG+EGKF+T+R I RL E+ +N+ LRV + + D
Sbjct: 300 ALPALSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLQKELVHNVALRVEETEDPDK 359
Query: 1274 IYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGI 1333
+ VSGRGELHL+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG
Sbjct: 360 -FRVSGRGELHLSILIENMRREGFELAVSRPEVIIKEEDGQLMEPFEVVTIDVLEEHQGG 418
Query: 1334 IMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
IM+ + R G+LK++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P
Sbjct: 419 IMENIGLRKGELKDMAPDGKGRVRMDFIMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGP 478
Query: 1394 FYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDN 1453
+ +G+R NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG IIGIH+R N
Sbjct: 479 HKGGT---IGQRNNGVLISNATGKALTYALFNLQERGRLFTEHADEVYEGQIIGIHNRSN 535
Query: 1454 DLLVNPIKEKQLTNIRSSGSDEAIQLISP-IKITLEYAIEFINDDELVEITPKNIRLRKR 1512
DL VN +K KQLTN+R+SG+DEA Q++SP IK TLE A+EFI+DDELVE+TP+NIR+RK+
Sbjct: 536 DLTVNCLKGKQLTNVRASGTDEA-QVLSPAIKYTLEQALEFIDDDELVEVTPENIRIRKK 594
Query: 1513 FLKENERKK 1521
L EN+RK+
Sbjct: 595 LLTENDRKR 603
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEVEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YHINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|385341492|ref|YP_005895363.1| translation initiation factor IF-2 [Neisseria meningitidis
M01-240149]
gi|385857677|ref|YP_005904189.1| translation initiation factor IF-2 [Neisseria meningitidis
NZ-05/33]
gi|325201698|gb|ADY97152.1| translation initiation factor IF-2 [Neisseria meningitidis
M01-240149]
gi|325208566|gb|ADZ04018.1| translation initiation factor IF-2 [Neisseria meningitidis
NZ-05/33]
Length = 962
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/539 (61%), Positives = 436/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQITGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +G+++RDS R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHARLIRNNVVIHTGELSSLKRYKDDVKEVRMGFEC 934
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|421540890|ref|ZP_15987027.1| translation initiation factor IF-2 [Neisseria meningitidis 93004]
gi|402317547|gb|EJU53084.1| translation initiation factor IF-2 [Neisseria meningitidis 93004]
Length = 962
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGYNEIMEG-DQLECFDI 955
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|170769644|ref|ZP_02904097.1| GTP-binding protein TypA [Escherichia albertii TW07627]
gi|170121452|gb|EDS90383.1| GTP-binding protein TypA [Escherichia albertii TW07627]
Length = 607
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETEVAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R G+L
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|395234021|ref|ZP_10412252.1| GTP-binding protein [Enterobacter sp. Ag1]
gi|394731387|gb|EJF31168.1| GTP-binding protein [Enterobacter sp. Ag1]
Length = 608
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/598 (56%), Positives = 452/598 (75%), Gaps = 8/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYN 983
AIIAHVDHGKTTL+D LL+QSGTF N+ A R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTF-SNERAEATERVMDSNDLEKERGITILAKNTAIKWN 67
Query: 984 GTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV 1043
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV
Sbjct: 68 DYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVV 127
Query: 1044 VNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPL 1103
+NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL
Sbjct: 128 INKVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGMDHNDMAADMTPL 187
Query: 1104 FEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK 1163
++AI+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 188 YQAIVDRVPAPNVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGK 246
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I TICDP LP L++DEP
Sbjct: 247 TRNGKVGKVLTHLGLERIESTEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEP 306
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
T+++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGEL
Sbjct: 307 TVSMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGEL 365
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGG 1343
HL++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +DIEE +QG +MQ L R G
Sbjct: 366 HLSVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDIEEQHQGSVMQALGERKG 425
Query: 1344 DLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLG 1403
DLKN+ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G
Sbjct: 426 DLKNMNPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYDDI---RQGEVG 482
Query: 1404 KRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEK 1463
+R+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K
Sbjct: 483 QRQNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGK 542
Query: 1464 QLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+LTN+R+SG+DEA L+ K+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 543 KLTNMRASGTDEATTLVPAQKMTLEQALEFIDDDELVEVTPLSVRIRKRHLTENDRKR 600
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS-EAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + FS E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFSNERAEATERVMDSNDLEKERGITILAKNTAIKWN 67
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 68 DYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVV 127
Query: 175 INKIDK 180
INK+D+
Sbjct: 128 INKVDR 133
>gi|156936150|ref|YP_001440066.1| GTP-binding protein [Cronobacter sakazakii ATCC BAA-894]
gi|389839028|ref|YP_006341112.1| GTP-binding protein TypA [Cronobacter sakazakii ES15]
gi|417791957|ref|ZP_12439370.1| GTP-binding protein [Cronobacter sakazakii E899]
gi|424801705|ref|ZP_18227247.1| GTP-binding protein TypA/BipA [Cronobacter sakazakii 696]
gi|429105692|ref|ZP_19167561.1| GTP-binding protein TypA/BipA [Cronobacter malonaticus 681]
gi|429112258|ref|ZP_19174028.1| GTP-binding protein TypA/BipA [Cronobacter malonaticus 507]
gi|429117426|ref|ZP_19178344.1| GTP-binding protein TypA/BipA [Cronobacter sakazakii 701]
gi|429118488|ref|ZP_19179251.1| GTP-binding protein TypA/BipA [Cronobacter sakazakii 680]
gi|449310248|ref|YP_007442604.1| GTP-binding protein [Cronobacter sakazakii SP291]
gi|156534404|gb|ABU79230.1| hypothetical protein ESA_04049 [Cronobacter sakazakii ATCC BAA-894]
gi|333953942|gb|EGL71831.1| GTP-binding protein [Cronobacter sakazakii E899]
gi|387849504|gb|AFJ97601.1| GTP-binding protein TypA [Cronobacter sakazakii ES15]
gi|423237426|emb|CCK09117.1| GTP-binding protein TypA/BipA [Cronobacter sakazakii 696]
gi|426292415|emb|CCJ93674.1| GTP-binding protein TypA/BipA [Cronobacter malonaticus 681]
gi|426313415|emb|CCK00141.1| GTP-binding protein TypA/BipA [Cronobacter malonaticus 507]
gi|426320555|emb|CCK04457.1| GTP-binding protein TypA/BipA [Cronobacter sakazakii 701]
gi|426327034|emb|CCK09988.1| GTP-binding protein TypA/BipA [Cronobacter sakazakii 680]
gi|449100281|gb|AGE88315.1| GTP-binding protein [Cronobacter sakazakii SP291]
Length = 607
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHSDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLGHLGLERIDTDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSVRIRKRHLTENDRKRAM 601
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|407717371|ref|YP_006838651.1| stress response GTPase [Cycloclasticus sp. P1]
gi|407257707|gb|AFT68148.1| membrane GTPase involved in stress response [Cycloclasticus sp. P1]
Length = 606
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + + RIMDSN+ EKERGITI +KN +IE+ G
Sbjct: 9 AIIAHVDHGKTTLVDKLLEQSGTLDRKNSGTERIMDSNDQEKERGITILAKNTAIEWQGL 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD VLLL+DAV+GPMPQTRFVT KA + G KPIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDCVLLLVDAVDGPMPQTRFVTSKAFEQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFDKL AT+EQLDFPVIY SA++G A + +M PLFE
Sbjct: 129 KVDRPGARPDWVIDQVFDLFDKLGATDEQLDFPVIYASAINGIAGPEADELADDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I VP + N P Q+QI SL Y SY+G IG+GRI G +K Q V I++ +DK
Sbjct: 189 IIRDNVPTPVVDVNAPFQMQISSLAYDSYVGVIGVGRITRGSLKPGQTVTIIDS-NDKQR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K K+ ++ GL+R+ V+EA +GDIV I GI+ + I T+CDP +P L++DEPT+
Sbjct: 248 KGKVLNVKGHLGLERIDVDEAFAGDIVCINGIDGLGISDTLCDPDHVEAMPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AG++GKF+T+R IK+RL+ E+ +N+ LRV D + VSGRGELHL
Sbjct: 308 SMTFSVNNSPFAGQDGKFVTSRNIKDRLNQELIHNVALRVEPGDSPDK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL V+RP VI K ++G++ EP+E + +DIEE +QG IM+++ R +L
Sbjct: 367 SVLIETMRREGFELGVARPEVIQKEIDGKMQEPFEMVVIDIEEQHQGPIMEEMGLRKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K R+RLE+ PSRGLIGF+ F+TLT G+G+++ VF+ Y + ++ R
Sbjct: 427 TNMEPDGKGRIRLEFMSPSRGLIGFRGHFLTLTSGSGIMTSVFDHYGQVKDG---EITSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S GK +A+ L+ LQ+RG+LF+ H + VYEG I+G+HSR NDL+VNP K KQL
Sbjct: 484 QNGVLVSMVKGKTLAFGLFNLQERGKLFLGHAEEVYEGQIVGLHSRGNDLVVNPTKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ P+ +TLE A+EFI DDELVE+TP +IRLRK+ L ENERK+
Sbjct: 544 TNVRASGTDEALTLVPPVVMTLEQALEFIEDDELVEVTPHHIRLRKKLLTENERKR 599
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + T+ I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLEQSGTLDRKNSGTERIMDSNDQEKERGITILAKNTAIEWQG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G+ IV I
Sbjct: 68 LHINIVDTPGHADFGGEVERVLSMVDCVLLLVDAVDGPMPQTRFVTSKAFEQGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|420301008|ref|ZP_14803048.1| GTP-binding protein TypA/BipA [Escherichia coli TW09109]
gi|425202409|ref|ZP_18598601.1| GTP-binding protein TypA/BipA [Escherichia coli NE037]
gi|390804265|gb|EIO71241.1| GTP-binding protein TypA/BipA [Escherichia coli TW09109]
gi|408112341|gb|EKH44000.1| GTP-binding protein TypA/BipA [Escherichia coli NE037]
Length = 607
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M L++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTLLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|429143594|gb|AFZ77065.1| GTP-binding protein [gamma proteobacterium PEB0191]
Length = 608
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/598 (57%), Positives = 445/598 (74%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN +EKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLKQSGTLDSRGDDTERVMDSNALEKERGITILAKNTAIDWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ +A +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGEDHEAMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V K + + P Q+QI L+Y++Y+G IGIGR+ GRIK Q V I++ +K N
Sbjct: 189 AIVKHVEPPKVDVDGPFQMQISQLDYNNYVGVIGIGRVKRGRIKPNQQVTIIDAQGNKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ GL R A +GDI+ +TG+ E+ I TICD + LP L +DEPT+
Sbjct: 249 -GKVGQVLRHLGLQRYEAEVAEAGDIIALTGLGELNISDTICDVTAVEALPALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+RQI +RL E+ +N+ LRV + D+ ++VSGRGELHL
Sbjct: 308 TMFFNVNTSPFAGKEGKFVTSRQILDRLKKELVHNVALRVEETPDPDA-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +D+EE +QG +M+ L R G+L
Sbjct: 367 SVLIENMRREGYELAVSRPKVIFKEIDGRKQEPFEQVTIDVEEQHQGPVMEALGLRKGNL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 TNMMPDGKGRVRLDYDIPSRGLIGFRTEFLTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ Y+L LQDRGRLF+ H VYEG IIGIH+R NDL VN + K+L
Sbjct: 484 INGVLISNGTGKALEYALHSLQDRGRLFLGHGVEVYEGQIIGIHTRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R++GSDEA L PIK+TLE ++EFI+DDELVE+TP +IRLRKR L EN+RK+
Sbjct: 544 TNMRAAGSDEATTLSPPIKMTLEQSLEFIDDDELVEVTPLSIRLRKRHLTENDRKRAF 601
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKQSGTLDSRGDDTERVMDSNALEKERGITILAKNTAIDWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|429085844|ref|ZP_19148802.1| GTP-binding protein TypA/BipA [Cronobacter condimenti 1330]
gi|426544916|emb|CCJ74843.1| GTP-binding protein TypA/BipA [Cronobacter condimenti 1330]
Length = 607
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHSDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLGHLGLERIETDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSVRIRKRHLTENDRKRAM 601
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|254805398|ref|YP_003083619.1| translation initiation factor IF-2 [Neisseria meningitidis alpha14]
gi|254668940|emb|CBA07188.1| translation initiation factor IF-2 [Neisseria meningitidis alpha14]
Length = 962
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQITGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHARLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|352105720|ref|ZP_08960927.1| GTP-binding protein TypA [Halomonas sp. HAL1]
gi|350598297|gb|EHA14419.1| GTP-binding protein TypA [Halomonas sp. HAL1]
Length = 616
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/601 (55%), Positives = 450/601 (74%), Gaps = 10/601 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL QSGT + R+MDSN+ EKERGITI +KN +I++
Sbjct: 17 AIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERVMDSNDQEKERGITILAKNTAIQWQDS 76
Query: 983 --NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
NG INI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA G KP
Sbjct: 77 HGNGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKP 136
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
IVVVNKIDR ARP+WV+D FDLFD L AT+EQLDFP+IY SAL+G A + +A NM
Sbjct: 137 IVVVNKIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIIYCSALNGIAGMDPEALADNM 196
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
P+F+AI+ V K + P Q+QI +L+Y+SY+G IG+GRI G +K Q V I+ G
Sbjct: 197 DPMFQAIVDIVEPPKVELDGPFQMQISALDYNSYVGVIGLGRIKRGAVKPNQQVSII-GV 255
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
D K KI Q+ GLDRV NEA +GDIV +TGI+++ I T+CDP+ LP L++
Sbjct: 256 DGNVRKGKIGQVMTHMGLDRVQTNEATAGDIVCVTGIDDLSISDTLCDPANVQALPPLSV 315
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT+++ F VN+SP AG++GKF+T+R IK+RL+ E+ +N+ LRV + + + ++VSGR
Sbjct: 316 DEPTVSMTFQVNDSPFAGKDGKFVTSRNIKDRLEQELIHNVALRVEEGETPEK-FKVSGR 374
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY 1340
GELHL++LIE MRREG+EL+V RP VI K ++GE EPYE + +D EE +QG IM++L Y
Sbjct: 375 GELHLSVLIETMRREGFELAVGRPEVIIKEIDGEKQEPYEEVIIDCEEQHQGSIMEELGY 434
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R G++ N+ + K RVRL++ IP+RGLIGF+ +F+TLT GTG+++ F+ Y P ++
Sbjct: 435 RKGEMTNMLPDGKGRVRLDFIIPARGLIGFRGQFLTLTSGTGILTSRFDHYGPLKPEASI 494
Query: 1401 DLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPI 1460
+ RRNGVL+S GKA+AY+L+ LQ+RG+L I+H VYEGM+IGI++R ND++VNP
Sbjct: 495 E---RRNGVLVSMVDGKALAYALYALQERGKLIIDHATEVYEGMLIGINNRANDMVVNPT 551
Query: 1461 KEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
K K+L N+RS+G+DE I L P+K +LE AIEF++ DELVE+TP +IRLRK+ LKE ERK
Sbjct: 552 KGKKLDNMRSTGNDENIVLTPPVKFSLEQAIEFLDSDELVEVTPVHIRLRKKLLKETERK 611
Query: 1521 K 1521
+
Sbjct: 612 R 612
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGG-----------------ITQHIGAYNVVT 113
V I+ HVDHGKT+L+D + ++ + +A G I A
Sbjct: 16 VAIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERVMDSNDQEKERGITILAKNTAIQWQD 75
Query: 114 NHGS---ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
+HG+ I +DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 76 SHGNGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLK 135
Query: 171 LIVAINKIDK 180
IV +NKID+
Sbjct: 136 PIVVVNKIDR 145
>gi|378581678|ref|ZP_09830322.1| GTP-binding protein [Pantoea stewartii subsp. stewartii DC283]
gi|377815592|gb|EHT98703.1| GTP-binding protein [Pantoea stewartii subsp. stewartii DC283]
Length = 607
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+I+ SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIFASALNGIAGLDHTDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + PLQ+QI L+Y++YLG IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSPPQVEVEAPLQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDPQNVQALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ G EP+EN+ +DIEE +QG +MQ + R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREFEGRKQEPFENVTLDIEETHQGSVMQAMGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P K+TLE AIEFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPQKMTLEQAIEFIDDDELVEVTPLSVRIRKRHLTENDRKR 599
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|343496205|ref|ZP_08734309.1| BipA protein [Vibrio nigripulchritudo ATCC 27043]
gi|342821526|gb|EGU56297.1| BipA protein [Vibrio nigripulchritudo ATCC 27043]
Length = 609
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 HINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ +M PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWASLEEGETGDSMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GR+ G +K Q + ++ G D K
Sbjct: 193 AIVDNVEAPQVDQDGPLQMQISQLDYSSYVGVIGVGRVTRGTVKPNQQITVI-GSDGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC ++ LP L++DEPT+
Sbjct: 252 NGKVGTVLGYLGLERHEVEQATAGDIIAITGLGELKISDTICAQNEVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDNPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+ EP+E + +D+ E NQG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQKLEPFETVTIDVLEENQGSIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 TDMSPDGKGRIRMDFMMPSRGLIGFQTEFMTLTSGSGLMYHTFDHYGPHKGG---EIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 488 VNGVLISNGAGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMTLEQALEFIDDDELVEVTPESIRIRKKFLSESDRKR 603
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YHINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|388255925|ref|ZP_10133106.1| GTP-binding protein TypA [Cellvibrio sp. BR]
gi|387939625|gb|EIK46175.1| GTP-binding protein TypA [Cellvibrio sp. BR]
Length = 608
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKT+++D LLRQSGT + + IMDSN+ E+ERGITI +KN +I++N
Sbjct: 14 AIIAHVDHGKTSMVDQLLRQSGTLDRRDDGADLIMDSNDQERERGITILAKNTAIKWNDY 73
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLL++DAV GPMPQTRFVT KA + G PIVV+N
Sbjct: 74 RINIVDTPGHADFGGEVERVLSMVDSVLLIVDAVGGPMPQTRFVTSKAFEQGLNPIVVIN 133
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARPEWVVD FDLFD+L ATEEQLDFP+IY SAL+G A + +M PLF+
Sbjct: 134 KIDRPGARPEWVVDQVFDLFDRLGATEEQLDFPIIYASALNGVAGLSPDDIADDMTPLFQ 193
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V K + + P Q+QI +L+YSSY+G IGIGRI G + Q +V+++ +
Sbjct: 194 MIVDKVKPPKVDLDGPFQMQISALDYSSYVGVIGIGRITRGSLSPNQQIVVVDH-EGNTR 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAK+ Q+ + GL R+ ++A +GDIV ITG++++ I T+C P LP L+IDEPT+
Sbjct: 253 KAKVLQVMGYHGLQRIETDKAYAGDIVCITGVDKLGISDTLCSPDCIEPLPALSIDEPTV 312
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RLD E+ N+ LRV Q D + VSGRGELHL
Sbjct: 313 SMTFQVNDSPFAGKEGKFVTSRNIKDRLDQELIANVALRVQQGDSPDK-FIVSGRGELHL 371
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL VSRP V+ K ++G ++EP+E + +D+EE +QG +M++L R G+L
Sbjct: 372 SVLIENMRREGYELGVSRPEVVQKIIDGVVHEPFEQVVIDVEEEHQGKVMEELGLRKGEL 431
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K R++LE+ PSRGLIGF+ +F+T+T G+G+++ +F+ Y P + ++ KR
Sbjct: 432 NNMEPDGKGRIKLEFLCPSRGLIGFRGQFLTMTSGSGIMTSIFDHYGPV---KEGEVAKR 488
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S GK +AY L LQDRGRLF+ VYEG I+GIHSR NDL+VNP K KQL
Sbjct: 489 QNGVLVSMVKGKTLAYGLHPLQDRGRLFLGAGVEVYEGQIVGIHSRSNDLVVNPTKAKQL 548
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A+ L PI+ TLE A+EFI DDELVE+TP++IRLRK+ L ENERK+
Sbjct: 549 TNVRASGTDDALTLSPPIRHTLEQALEFIEDDELVEVTPQSIRLRKKLLTENERKR 604
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKTS++D + + + GIT + N
Sbjct: 13 IAIIAHVDHGKTSMVDQLLRQSGTLDRRDDGADLIMDSNDQERERGITILAKNTAIKWND 72
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A G MPQTR + A G+ IV I
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLIVDAVGGPMPQTRFVTSKAFEQGLNPIVVI 132
Query: 176 NKIDK 180
NKID+
Sbjct: 133 NKIDR 137
>gi|254669621|emb|CBA03662.1| translation initiation factor IF-2 [Neisseria meningitidis
alpha153]
Length = 640
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 447/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 75 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 133
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 134 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 193
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 194 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 253
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 254 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLHIDALLEAVLLEAEVLELTAPVD 313
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 314 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 373
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 374 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 433
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 434 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 493
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 494 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 553
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 554 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 613
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 614 LMLKGYNEIMEG-DQLECFDI 633
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 147 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 193
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 194 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 250
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 251 IDKEAANPERI 261
>gi|261855004|ref|YP_003262287.1| GTP-binding protein TypA [Halothiobacillus neapolitanus c2]
gi|261835473|gb|ACX95240.1| GTP-binding protein TypA [Halothiobacillus neapolitanus c2]
Length = 613
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/601 (55%), Positives = 449/601 (74%), Gaps = 10/601 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN IEKERGITI +KN +I +
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLDARTDTGERMMDSNAIEKERGITILAKNTAIRWTSP 72
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA + G KP
Sbjct: 73 SGEEYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFEHGLKP 132
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
IVV+NKIDR +RP+WVVD FDLFD+L A++EQLDFP++Y SAL+GYA R+G+M
Sbjct: 133 IVVINKIDRPGSRPQWVVDQVFDLFDRLGASDEQLDFPIVYASALNGYAGLEDSVREGDM 192
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
PL++ I+ V ++ PLQ+Q+ SL+Y+ Y+G +GI +I GRIK+ V +++
Sbjct: 193 TPLYQTIVDSVAPPDVDAEGPLQMQVSSLDYNPYMGVMGIAKIQRGRIKTNTQVKVVD-R 251
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
+ +I QI F GL+R+ V A +GDI++ +G++ + I TICDP LP L +
Sbjct: 252 EGAIRSGRILQIMGFHGLERIEVPSAQAGDIIVFSGLDPLFISDTICDPEHVEMLPPLTV 311
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT++++F VN SP AG+EGKFIT+RQI++RL E+ +N+ LRV + D + VSGR
Sbjct: 312 DEPTVSMSFNVNTSPFAGKEGKFITSRQIRDRLHKELLHNVALRVEDTEEGDK-FRVSGR 370
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY 1340
GELHL++LIENMRREG+E+ V RP VI + ++G EPYE L VDIEE NQG +M+KL
Sbjct: 371 GELHLSVLIENMRREGFEMGVGRPEVIIREVDGVKQEPYEQLVVDIEEQNQGAVMEKLGT 430
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R +L+N+E + K RVRLEY IPSRGLIGF+ EF+T T+GTGL+ VF+ Y +
Sbjct: 431 RRAELRNMEPDGKGRVRLEYIIPSRGLIGFRTEFMTATQGTGLLFSVFDHYGEY---KPG 487
Query: 1401 DLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPI 1460
++G+R NGVLI+ +GKA++Y+L+ LQDRG++ I H D VYEG ++GIHSRDNDL VN +
Sbjct: 488 NVGQRINGVLIANETGKALSYALYNLQDRGKMMIGHGDEVYEGQVVGIHSRDNDLTVNVL 547
Query: 1461 KEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
K K+LTN+R+SG+DEA+ L+ PI+ TLE A+EFI+DDELVE+TP +IR+RK++L E +RK
Sbjct: 548 KGKKLTNMRASGTDEALTLVPPIRFTLEQALEFIDDDELVEVTPASIRIRKKWLTELDRK 607
Query: 1521 K 1521
+
Sbjct: 608 R 608
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLDARTDTGERMMDSNAIEKERGITILAKNTAIRWTS 71
Query: 122 -----------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 72 PSGEEYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFEHGLK 131
Query: 171 LIVAINKIDK 180
IV INKID+
Sbjct: 132 PIVVINKIDR 141
>gi|260599975|ref|YP_003212546.1| GTP-binding protein [Cronobacter turicensis z3032]
gi|429094107|ref|ZP_19156661.1| GTP-binding protein TypA/BipA [Cronobacter dublinensis 1210]
gi|429098714|ref|ZP_19160820.1| GTP-binding protein TypA/BipA [Cronobacter dublinensis 582]
gi|260219152|emb|CBA34507.1| GTP-binding protein typA/bipA [Cronobacter turicensis z3032]
gi|426285054|emb|CCJ86933.1| GTP-binding protein TypA/BipA [Cronobacter dublinensis 582]
gi|426740906|emb|CCJ82774.1| GTP-binding protein TypA/BipA [Cronobacter dublinensis 1210]
Length = 607
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHSDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLGHLGLERIDTDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSVRIRKRHLTENDRKRAM 601
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|451936503|ref|YP_007460357.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777426|gb|AGF48401.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 951
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/539 (61%), Positives = 445/539 (82%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+ VIKNLMKLGQMVTINQVLDQETAMI+VEE GH + A+K++DPE FL N
Sbjct: 387 MSIKAGEVIKNLMKLGQMVTINQVLDQETAMIVVEEFGHTSIAAKIDDPEIFLDTTDASN 446
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A+S RAP+VT+MGHVDHGKTSLLDYI++T V SEAGGITQHIGAYNV T+ GSITF
Sbjct: 447 --ADSTHRAPVVTVMGHVDHGKTSLLDYIKRTKVTNSEAGGITQHIGAYNVKTDMGSITF 504
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAF AMRARGAK+TDIV+LVVAADDGVMPQTREAI H K + VP+IVA+ K DK
Sbjct: 505 LDTPGHEAFAAMRARGAKLTDIVILVVAADDGVMPQTREAINHVKAANVPVIVALTKSDK 564
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
NLD++KQ+LI+E++IPEEYGG+ PF+ +SAKTG GI+ LLENI LQ+E+LELKA V
Sbjct: 565 SSANLDKVKQELITEEIIPEEYGGSVPFVPVSAKTGDGIDILLENIILQSEVLELKAQVD 624
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
T AKG++IE+ LDKG+GPVATVL+Q+GTL+ D+++ GA++GR+RSMLNE+G I +AGP
Sbjct: 625 TKAKGIVIEASLDKGRGPVATVLVQNGTLKKGDVILVGATFGRVRSMLNESGNPIEKAGP 684
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GLT VP + + L V+ +E+KAREI LFRQGKFRD KL++++ K E++F++I+
Sbjct: 685 SIPVEIHGLTDVPSAADFLVVLSDERKAREIALFRQGKFRDSKLARKQADKLESIFDNIS 744
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
++++ II+K+DV GS+E + SL LS D+V ++++H AVG I+++D+NLAIAS A+
Sbjct: 745 DSSIQSISIIVKSDVQGSQEAIASSLLKLSNDEVCVKIVHAAVGGISDNDVNLAIASNAV 804
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRAD+ RK A++NNINIRY++IIY+ I +IK ++ ++ EKKE ++GL EIR+
Sbjct: 805 IIGFNVRADSIARKNAELNNINIRYYSIIYDAINDIKQAMSGMLIPEKKEEIVGLVEIRE 864
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ + K+ K+AGC +L+G +++DS++R++RN + WTG+++SL+RFKD+VKEV++GF+C
Sbjct: 865 IYSIPKIGKVAGCMVLDGTVKKDSRVRLIRNNVVSWTGQIESLRRFKDDVKEVRSGFDC 923
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R ++ +S + GIT +++ +
Sbjct: 458 VMGHVDHGKTSLLDYIKR------------TKVTNS----EAGGITQHIGAYNVKTDMGS 501
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGH F R + D V+L++ A +G MPQTR IV + K
Sbjct: 502 ITFLDTPGHEAFAAMRARGAKLTDIVILVVAADDGVMPQTREAINHVKAANVPVIVALTK 561
Query: 1047 IDRSNA 1052
D+S+A
Sbjct: 562 SDKSSA 567
>gi|374621263|ref|ZP_09693797.1| GTP-binding protein TypA/BipA [gamma proteobacterium HIMB55]
gi|374304490|gb|EHQ58674.1| GTP-binding protein TypA/BipA [gamma proteobacterium HIMB55]
Length = 619
Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + RIMDSN+ E+ERGITI +KN +I +N
Sbjct: 24 AIIAHVDHGKTTLVDCLLQQSGTLDRKSQGAERIMDSNDQERERGITILAKNTAIRWNDY 83
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLL++DAV+GPMPQTRFVT KA + G PIVVVN
Sbjct: 84 RINIVDTPGHADFGGEVERVLSMVDSVLLIVDAVDGPMPQTRFVTSKAFERGLNPIVVVN 143
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A ++ + +M PLF
Sbjct: 144 KIDRPGARPDWVIDQVFDLFDSLGATDEQLDFPIMYASALNGIAGDDPENMSDDMEPLFN 203
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ +V + NS+ P Q+QI +L+Y+SY+G IG+GRI G++ V +++ D
Sbjct: 204 MIVDHVSAPEVNSDGPFQMQISALDYNSYVGVIGVGRITRGKLSPNTQVSVVDR-DASSR 262
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI Q+ + GL+RV V A +GDIV +TGI+ + I T+CDP+ LP L++DEPT+
Sbjct: 263 SGKILQVMGYHGLERVEVETAEAGDIVCVTGIDSLNISDTLCDPAASEALPPLSVDEPTV 322
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG EGK++T+R IK RLD E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 323 SMTFQVNDSPFAGLEGKYVTSRNIKERLDRELIHNVALRVEQGDSPDK-FVVSGRGELHL 381
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE+MRREG+EL VSRP VI K ++G+L EPYE L +D E +QG +M++L R ++
Sbjct: 382 SVLIESMRREGFELGVSRPEVIQKEIDGQLCEPYEQLVIDCESEHQGGVMEELGQRRAEM 441
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + RVRLE+ +P+RGLIGF++ F+TLT G+G+++H+F+ Y P SK +L +R
Sbjct: 442 KNMVQDASGRVRLEFIVPARGLIGFRSMFMTLTSGSGIMTHIFDHYGPV---SKAELAQR 498
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S GK +AY+L+ LQDRGRL+I N VYEG I+G+HSR NDL+VNP K KQL
Sbjct: 499 NNGVLVSMVKGKTLAYALYSLQDRGRLYIEANVEVYEGQIVGLHSRSNDLVVNPTKAKQL 558
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L P+ TLE A+EFI+ DELVE+TP++IRLRK+ L E+ERK+
Sbjct: 559 TNVRASGTDEALILTPPVLHTLEQALEFIDSDELVEVTPESIRLRKKLLLEHERKR 614
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + I N IT L
Sbjct: 23 IAIIAHVDHGKTTLVDCLLQQSGTLDRKSQGAERIMDSNDQERERGITILAKNTAIRWND 82
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G+ IV +
Sbjct: 83 YRINIVDTPGHADFGGEVERVLSMVDSVLLIVDAVDGPMPQTRFVTSKAFERGLNPIVVV 142
Query: 176 NKIDK 180
NKID+
Sbjct: 143 NKIDR 147
>gi|254516079|ref|ZP_05128139.1| GTP-binding protein TypA/BipA [gamma proteobacterium NOR5-3]
gi|219675801|gb|EED32167.1| GTP-binding protein TypA/BipA [gamma proteobacterium NOR5-3]
Length = 603
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + + RIMDSN+ E+ERGITI +KN +I Y
Sbjct: 9 AIIAHVDHGKTTLVDCLLRQSGTLDRRDADSVRIMDSNDQERERGITILAKNTAINYGDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPI+VVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAQGLKPILVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLFD L A+EEQLDFP+I+ SAL G + + + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFDSLGASEEQLDFPIIFASALEGISGLDHEDMAADMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP + + PLQLQI +L+Y+SY+G IG+GRI G +K VV+++ + K
Sbjct: 189 SIISKVPAPDVDVDGPLQLQISALDYNSYVGVIGVGRISRGILKPNTQVVVVDH-EGKQR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K K+ Q+ + GL+R+ +EA +GDIV +TGIE + I T+CDP+ P+ LP L++DEPT+
Sbjct: 248 KGKVLQVMGYMGLERIETSEARAGDIVCVTGIEALNISDTLCDPANPDALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGK++T+R I RL+ E+ +N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKYVTSRNIAERLERELIHNVALRVEPGETPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ VSRP VI K ++G ++EP+E L +D E+ +QG +M++L R DL
Sbjct: 367 SVLIETMRREGFEMGVSRPEVIRKEIDGVIHEPFEELVIDCEDKHQGSLMEELGARRADL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K VRLE+ +P+RGLIGF++ F+TLT G+G ++HVF+ Y P ++ ++ R
Sbjct: 427 KNMSPDGKGWVRLEFIVPARGLIGFRSLFLTLTSGSGTLTHVFDHYGPVKDQ---EISHR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S GK +A+ L+ LQ+RGRLF++ N VYEG I+G+HSR NDL VNP K KQL
Sbjct: 484 SNGVLVSMVKGKTLAFGLFNLQERGRLFVDPNVQVYEGQIVGLHSRGNDLTVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L P + TLE A+EFI DDELVE+TP++IRLRK+ L E+ERK+
Sbjct: 544 TNVRASGTDEALVLTPPTRHTLEQALEFIEDDELVEVTPESIRLRKKLLLEHERKR 599
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + GIT I A N N+
Sbjct: 8 IAIIAHVDHGKTTLVDCLLRQSGTLDRRDADSVRIMDSNDQERERGIT--ILAKNTAINY 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
G I +DTPGH F R + D V+L+V A DG MPQTR + A G+ I+
Sbjct: 66 GDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAQGLKPIL 125
Query: 174 AINKIDK 180
+NK+D+
Sbjct: 126 VVNKVDR 132
>gi|153833891|ref|ZP_01986558.1| GTP-binding protein TypA/BipA [Vibrio harveyi HY01]
gi|156972912|ref|YP_001443819.1| GTPase [Vibrio harveyi ATCC BAA-1116]
gi|444424796|ref|ZP_21220248.1| GTPase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|148869729|gb|EDL68706.1| GTP-binding protein TypA/BipA [Vibrio harveyi HY01]
gi|156524506|gb|ABU69592.1| hypothetical protein VIBHAR_00590 [Vibrio harveyi ATCC BAA-1116]
gi|444241919|gb|ELU53437.1| GTPase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 609
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWAALEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVEEVTAPQVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC ++ LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNQVEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFEMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLIANAMGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PIK+TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIKMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|149191767|ref|ZP_01870006.1| BipA protein [Vibrio shilonii AK1]
gi|148834409|gb|EDL51407.1| BipA protein [Vibrio shilonii AK1]
Length = 610
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 440/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGETEERVMDSNDIEKERGITILAKNTAINWNDH 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A++EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGASDEQLDFQVVYASALNGWATLEEGEEGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + LQ+QI L+YSSY+G IG+GR+ G +K Q V ++ G D K
Sbjct: 193 AIVDNVEAPAVDPEGALQMQISQLDYSSYVGVIGVGRVTRGTVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVLGYLGLERHEVQQATAGDIIAITGLGELKISDTICAQGEVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQLDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+ EPYE + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQKQEPYETVTIDVMEEHQGSIMEAIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y PF ++G+R
Sbjct: 431 TDMAPDGKGRIRMDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPFKGG---EIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 488 VNGVLISNGAGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMTLEQALEFIDDDELVEVTPESIRIRKKFLSESDRKR 603
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGETEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 HRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|421568125|ref|ZP_16013853.1| translation initiation factor IF-2 [Neisseria meningitidis NM3001]
gi|402342431|gb|EJU77596.1| translation initiation factor IF-2 [Neisseria meningitidis NM3001]
Length = 962
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDTANPERI 583
>gi|416168924|ref|ZP_11608082.1| translation initiation factor IF-2 [Neisseria meningitidis
OX99.30304]
gi|325130688|gb|EGC53428.1| translation initiation factor IF-2 [Neisseria meningitidis
OX99.30304]
Length = 962
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 445/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMLKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDTANPERI 583
>gi|375258179|ref|YP_005017349.1| GTP-binding protein [Klebsiella oxytoca KCTC 1686]
gi|397655110|ref|YP_006495812.1| GTP-binding protein TypA/BipA [Klebsiella oxytoca E718]
gi|423105660|ref|ZP_17093362.1| GTP-binding protein TypA/BipA [Klebsiella oxytoca 10-5242]
gi|423126582|ref|ZP_17114261.1| GTP-binding protein TypA/BipA [Klebsiella oxytoca 10-5250]
gi|365907657|gb|AEX03110.1| GTP-binding protein [Klebsiella oxytoca KCTC 1686]
gi|376379904|gb|EHS92653.1| GTP-binding protein TypA/BipA [Klebsiella oxytoca 10-5242]
gi|376396838|gb|EHT09475.1| GTP-binding protein TypA/BipA [Klebsiella oxytoca 10-5250]
gi|394343862|gb|AFN29983.1| GTP-binding protein TypA/BipA [Klebsiella oxytoca E718]
Length = 607
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/598 (55%), Positives = 450/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 TIVDRVPAPNVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDVAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETPDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRAGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|90415541|ref|ZP_01223475.1| GTP-binding protein TypA [gamma proteobacterium HTCC2207]
gi|90332864|gb|EAS48034.1| GTP-binding protein TypA [marine gamma proteobacterium HTCC2207]
Length = 603
Score = 694 bits (1791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + + R+MDSN+ EKERGITI +KN +I +N
Sbjct: 10 AIIAHVDHGKTTLVDKLLSQSGTLDRKDVGSERLMDSNDQEKERGITILAKNTAINWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA + G +PIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFEQGLRPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L AT+EQLDFPVIY SAL+G A + +M PL+E
Sbjct: 130 KVDRPGARPDWVMDQVFDLFDNLGATDEQLDFPVIYASALNGIAGLDVDDMADDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP K + + P Q+Q+ +L Y SY+G IG+GRI G++K Q V++ + D K
Sbjct: 190 MIVNDVPAPKVDVDGPFQMQVSALAYDSYVGVIGVGRITRGKLKPGQQVIVKSA-DGKER 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K K+ ++ + GL+++ A +GDIV I GI+ + I T+CDP LP L++DEPT+
Sbjct: 249 KGKVLNVKGYLGLEQIETQLAGAGDIVCINGIDGLSISDTLCDPENIEALPALSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F+VN+SP AG EGK++TTR IK+RL+ E+ +N+ LRV D + VSGRGELHL
Sbjct: 309 SMTFIVNDSPFAGLEGKYVTTRNIKDRLEQELIHNVALRVAPGDTPDK-FIVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ VSRP V+ K ++G++YEP+E + +D+EE +QG +M++L R +L
Sbjct: 368 SVLIETMRREGFEMGVSRPEVVKKIVDGKVYEPFEQVVIDVEEQHQGSVMEELGMRKAEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K RVRLE+ +PSRGLIGF+ F+TLT G+G+++ +F++YAP + R
Sbjct: 428 TNMEPDGKGRVRLEFSMPSRGLIGFRGAFLTLTSGSGIMTSIFDKYAPAKEGEAH---SR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NG LIS GK AY+L+ +Q RGRLF+ H VYEG ++GIHSR+NDL+VNPIK KQL
Sbjct: 485 KNGALISMVKGKTAAYALFNIQARGRLFLGHAIDVYEGQVVGIHSRNNDLVVNPIKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PIK TLE A+EFI DDELVE+TP +IRLRK+ L ENERK+
Sbjct: 545 TNVRASGTDEALTLVPPIKHTLEQALEFIEDDELVEVTPVSIRLRKKRLTENERKR 600
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 59/127 (46%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + GIT I A N N
Sbjct: 9 IAIIAHVDHGKTTLVDKLLSQSGTLDRKDVGSERLMDSNDQEKERGIT--ILAKNTAINW 66
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR + A G+ IV
Sbjct: 67 NDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFEQGLRPIV 126
Query: 174 AINKIDK 180
INK+D+
Sbjct: 127 VINKVDR 133
>gi|429102464|ref|ZP_19164438.1| GTP-binding protein TypA/BipA [Cronobacter turicensis 564]
gi|426289113|emb|CCJ90551.1| GTP-binding protein TypA/BipA [Cronobacter turicensis 564]
Length = 607
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHSDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPLVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLGHLGLERIDTDLAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYDDI---RPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSVRIRKRHLTENDRKRAM 601
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|429462706|ref|YP_007184169.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811539|ref|YP_007447994.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338220|gb|AFZ82643.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776697|gb|AGF47696.1| translation initiation factor IF-2 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 958
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/540 (60%), Positives = 440/540 (81%), Gaps = 2/540 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K++ VIK+LMKLGQMVTINQVLDQETAMI+VE++GH A A+K++DPE+FL +E N
Sbjct: 392 MSIKAAEVIKHLMKLGQMVTINQVLDQETAMIVVEDLGHTAVAAKIDDPETFL-DESNVI 450
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
++ + RAP+VT+MGHVDHGKTSLLDYIRK + +EAGGITQHIGAYNV T+ GSITF
Sbjct: 451 NQSDYITRAPVVTVMGHVDHGKTSLLDYIRKATIASNEAGGITQHIGAYNVRTSLGSITF 510
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAF AMRARGAK TDIVVLVVAADDGVMPQT+EAI+H K + +P+IVA+ K DK
Sbjct: 511 LDTPGHEAFAAMRARGAKATDIVVLVVAADDGVMPQTKEAISHVKSASIPMIVALTKADK 570
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
NLD+++Q+LISE ++PEEYGG PFI +S+KTG GI+ LLE+I LQAEILELKA V
Sbjct: 571 QSANLDKVRQELISEGIVPEEYGGDIPFIMVSSKTGSGIDSLLEHILLQAEILELKASVN 630
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKGV+IE+ LDKGKGP++TVLIQ+GTL+ D+V+ GA++GR+R+ML+E G + EAGP
Sbjct: 631 VSAKGVVIEASLDKGKGPISTVLIQNGTLKKGDVVLVGATFGRVRAMLDEKGLALQEAGP 690
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GLT VP +G+ L + +E+KAREI LFRQGKFRD KL+K+ E+MF+++
Sbjct: 691 SIPVEIHGLTDVPSAGDILVSLNDERKAREIALFRQGKFRDSKLAKKHAANFESMFDNMA 750
Query: 361 KE-KVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
+ + L IIIK DV GS+E L SL LSTD+VK+++IH AVG I+++D+NLA+AS A
Sbjct: 751 DAIESRILSIIIKADVQGSQEALANSLIKLSTDEVKVKIIHAAVGGISDNDVNLAVASNA 810
Query: 420 IIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIR 479
IIGFNV+ADA +K A++NN+ + Y+NIIY+ I ++KS ++ ++ EKKE+++G EIR
Sbjct: 811 FIIGFNVKADAIAKKNAELNNVRMSYYNIIYDAINDVKSAMSGMLAPEKKEDIIGTVEIR 870
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+V ++K+ +AGC + EG++++DSK+R+ RN ++WTG++DSL+RFKD+VKEV++GF+C
Sbjct: 871 EVYAISKIGSVAGCMVTEGIVKKDSKVRLFRNNVVVWTGQIDSLRRFKDDVKEVRSGFDC 930
Score = 54.3 bits (129), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ + + + SNE GIT ++ +
Sbjct: 464 VMGHVDHGKTSLLDYIRKAT-------------IASNEA---GGITQHIGAYNVRTSLGS 507
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGH F R D V+L++ A +G MPQT+ IV + K
Sbjct: 508 ITFLDTPGHEAFAAMRARGAKATDIVVLVVAADDGVMPQTKEAISHVKSASIPMIVALTK 567
Query: 1047 IDRSNA 1052
D+ +A
Sbjct: 568 ADKQSA 573
>gi|308047814|ref|YP_003911380.1| GTP-binding protein TypA [Ferrimonas balearica DSM 9799]
gi|307630004|gb|ADN74306.1| GTP-binding protein TypA [Ferrimonas balearica DSM 9799]
Length = 608
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT ++ R+MDSN++EKERGITI +KN +I++N
Sbjct: 10 AIIAHVDHGKTTLVDKLLSQSGTLDARVALDERVMDSNDLEKERGITILAKNTAIKWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ +M LF+
Sbjct: 130 KIDKPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWASAEEGETAEDMTALFQ 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + P Q+QI L+Y+SY+G IG+GR+ GR+K Q V + +G +
Sbjct: 190 TIVDEVSPPSADPEGPFQMQISQLDYNSYVGVIGVGRVSRGRVKVGQQVTV-HGANGITR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+R V EA +GDI+ I+G+ E+ I T+C P++ LP L++DEPT+
Sbjct: 249 NGKVGQVLGYMGLERHEVGEAQAGDIIAISGLGELKISDTVCCPTEVEALPALSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D ++VSGRGELHL
Sbjct: 309 TMTFQVNTSPFAGQEGKYVTSRNILERLQKELVHNVALRVEETDDPDK-FKVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+LIENMRREG+EL+VSRP VI +T++GEL EPYE + VD+EE +QG IM+KL R +L
Sbjct: 368 GVLIENMRREGFELAVSRPEVIMRTVDGELQEPYETVTVDVEEAHQGSIMEKLGLRKAEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R+R+++ +PSRGLIGFQ EF+TLT GTGL+ H F EY P ++G+R
Sbjct: 428 TDMSPDGKGRIRMDFIMPSRGLIGFQTEFMTLTSGTGLLYHTFYEYGPHKGG---NIGQR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ +L+ LQ+RGRL + H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 485 INGVLIANATGKALTNALFNLQERGRLMVGHGTEVYEGMVIGIHSRDNDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PI++TLE A+EFI+DDELVE+TP++IR+RK+ L E++RK+
Sbjct: 545 TNMRASGTDEAQVLTPPIQLTLERALEFIDDDELVEVTPESIRIRKKLLTESDRKR 600
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + + + N + IT L
Sbjct: 9 VAIIAHVDHGKTTLVDKLLSQSGTLDARVALDERVMDSNDLEKERGITILAKNTAIKWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|260771960|ref|ZP_05880877.1| GTP-binding protein TypA/BipA [Vibrio metschnikovii CIP 69.14]
gi|260612827|gb|EEX38029.1| GTP-binding protein TypA/BipA [Vibrio metschnikovii CIP 69.14]
Length = 607
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 440/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN +I ++
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDAEERVMDSNDIEKERGITILAKNTAINWHDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD V L++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDCVCLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A++EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGASDEQLDFQVVYASALNGWATLEEGVIGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GR+ G +K+ Q V +++ D K
Sbjct: 193 AIVDNVEPPQVDLSGPLQMQISQLDYSSYVGVIGVGRVTRGSVKANQQVTVISA-DGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL R A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKVGTVLGYLGLQRTETELATAGDIVAVTGLGELKISDTICDVNAVEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K NG+L EP+E + +D+ E +QG IM+K+ R G++
Sbjct: 371 SILIENMRREGFELAVSRPEVILKEENGQLMEPFETVTIDVMEEHQGGIMEKIGLRKGEM 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P D+G+R
Sbjct: 431 KDMSPDGKGRVRLDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---DIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG +IGIH+R NDL VN +K KQL
Sbjct: 488 VNGVLISNATGKALTYALFNLQERGRLFTEHADEVYEGQVIGIHNRSNDLTVNCLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L IK TLE A+EFI+DDELVE+TPK+IR+RK+ L ENERK+
Sbjct: 548 TNVRASGTDEAQVLTPAIKFTLEQALEFIDDDELVEVTPKSIRIRKKHLTENERKR 603
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDAEERVMDSNDIEKERGITILAKNTAINWHD 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDCVCLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|120553703|ref|YP_958054.1| GTP-binding protein TypA [Marinobacter aquaeolei VT8]
gi|387813070|ref|YP_005428551.1| GTP-binding elongation factor family protein with P-loop containing
NTP hydrolase domain [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|120323552|gb|ABM17867.1| GTP-binding protein TypA [Marinobacter aquaeolei VT8]
gi|381338081|emb|CCG94128.1| GTP-binding elongation factor family protein with P-loop containing
NTP hydrolase domain [Marinobacter hydrocarbonoclasticus
ATCC 49840]
Length = 603
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + + N R+MDSN+ EKERGITI +KN ++++
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++D+++GPMPQTRFVT+KA G PIVVVN
Sbjct: 69 DINIVDTPGHADFGGEVERVMSMVDSVLLVVDSIDGPMPQTRFVTQKAFAAGLNPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD L AT+EQLDFP++Y SAL+G A + + NM +F+
Sbjct: 129 KIDRPGARPDWVVDQVFDLFDNLGATDEQLDFPIVYASALNGIAGMDHENLDDNMDAVFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+S+LG IGIGRI+ G++K+ VV + G D K
Sbjct: 189 AIVDHVPAPSVDLDGPFQMQISQLDYNSFLGVIGIGRIMRGKVKTNTPVVAI-GADGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G++++ I T+CDPS LP L +DEPT+
Sbjct: 248 NGRILKIMGHSGLQRVEVEEAQAGDIVCVSGLDQLFISDTLCDPSNVEALPALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGK++T+R IK RL+ E+ +N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKYVTSRNIKERLEKELLHNVALRVEEGDSADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRRE +EL+V RP V+ K ++G+ EPYEN+ +DIEE +QG IM+++ R GD+
Sbjct: 367 SVLIENMRRENFELAVGRPVVVIKEVDGQKQEPYENVIIDIEEQHQGPIMEQMGLRKGDM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RLEY IP+RGLIGF+N F+T+T GTG+++ F Y P D+ R
Sbjct: 427 TNMIPDGKGRIRLEYTIPARGLIGFRNTFLTMTSGTGILTSTFSHYGPV---KMGDVTSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV++S +G A+ YSL LQ RG+LF++ +YEG + GIHSRDNDL+VNP K K+L
Sbjct: 484 QNGVIVSMATGTALTYSLETLQSRGKLFLDPGQEIYEGQLCGIHSRDNDLVVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
N+R+SG DE I L+ PIK TLE A+EFI+DDELVE+TPK+IRLRK+ L ENERK+
Sbjct: 544 DNMRASGKDEVIGLVPPIKFTLEQALEFIDDDELVEVTPKSIRLRKKLLTENERKR 599
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + + + N IT L
Sbjct: 8 VAIIAHVDHGKTTLVDQLLRQSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV + DG MPQTR A +G+ IV +
Sbjct: 68 YDINIVDTPGHADFGGEVERVMSMVDSVLLVVDSIDGPMPQTRFVTQKAFAAGLNPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|388602788|ref|ZP_10161184.1| GTPase [Vibrio campbellii DS40M4]
Length = 609
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWAALEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVDEVTAPQVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC ++ LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNQVEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFEMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLIANAMGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PIK+TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIKMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|163802226|ref|ZP_02196121.1| BipA protein [Vibrio sp. AND4]
gi|159174031|gb|EDP58841.1| BipA protein [Vibrio sp. AND4]
Length = 609
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWAALEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVEEVTAPQVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC ++ LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNQVEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFDMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLIANAMGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PIK+TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIKMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|416201912|ref|ZP_11619895.1| translation initiation factor IF-2 [Neisseria meningitidis
961-5945]
gi|325142811|gb|EGC65182.1| translation initiation factor IF-2 [Neisseria meningitidis
961-5945]
Length = 959
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 394 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 452
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 453 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 512
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 513 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 572
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 573 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLHIDALLEAVLLEAEVLELTAPVD 632
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK I EAGP
Sbjct: 633 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAINEAGP 692
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 693 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 752
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 753 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 812
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 813 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 872
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 873 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 932
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 933 LMLKGYNEIMEG-DQLECFDI 952
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 466 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 512
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 513 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 569
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 570 IDKEAANPERI 580
>gi|298500442|ref|ZP_07010246.1| GTP-binding protein TypA/BipA [Vibrio cholerae MAK 757]
gi|297540611|gb|EFH76668.1| GTP-binding protein TypA/BipA [Vibrio cholerae MAK 757]
Length = 609
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 193 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNALEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 431 KDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHSFDHYGPHKGGV---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ +FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 488 VNGVLVSNGTGKALTNALFNLQAGRCMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 603
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|421563814|ref|ZP_16009629.1| translation initiation factor IF-2 [Neisseria meningitidis NM2795]
gi|402339894|gb|EJU75101.1| translation initiation factor IF-2 [Neisseria meningitidis NM2795]
Length = 962
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDTANPERI 583
>gi|416160220|ref|ZP_11606110.1| translation initiation factor IF-2 [Neisseria meningitidis N1568]
gi|325128687|gb|EGC51553.1| translation initiation factor IF-2 [Neisseria meningitidis N1568]
Length = 962
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 446/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ V I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVSGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|254228542|ref|ZP_04921967.1| GTP-binding protein TypA/BipA [Vibrio sp. Ex25]
gi|262392677|ref|YP_003284531.1| GTP-binding protein TypA [Vibrio sp. Ex25]
gi|151938924|gb|EDN57757.1| GTP-binding protein TypA/BipA [Vibrio sp. Ex25]
gi|262336271|gb|ACY50066.1| GTP-binding protein TypA/BipA [Vibrio sp. Ex25]
Length = 609
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I++N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAIDWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A++EQLDF V+Y SAL+G+A+ NM PLFE
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGASDEQLDFKVVYASALNGWASLEEGETGENMEPLFE 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + PLQ+QI L+YSSY+G IG+GR+ G +K Q V ++ G D K
Sbjct: 193 TIVGEVAAPAVDLDGPLQMQISQLDYSSYVGVIGVGRVTRGSVKPNQQVTVV-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNAVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMAPDGKGRVRMDFIMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 INGVLIANAAGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAIDWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|270158145|ref|ZP_06186802.1| GTP-binding protein BipA [Legionella longbeachae D-4968]
gi|289163593|ref|YP_003453731.1| GTP-binding protein TypA [Legionella longbeachae NSW150]
gi|269990170|gb|EEZ96424.1| GTP-binding protein BipA [Legionella longbeachae D-4968]
gi|288856766|emb|CBJ10577.1| putative GTP-binding protein TypA/BipA [Legionella longbeachae
NSW150]
Length = 608
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/596 (57%), Positives = 450/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+Q+GT + R+MDSN +EKERGITI +KN + +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKNH 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVERILSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIVV+N
Sbjct: 69 QINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP WV+D FDLFD L AT+ QLDFPV+YTSAL+GYA + + +M L +
Sbjct: 129 KIDRPGARPHWVMDQVFDLFDNLGATDAQLDFPVVYTSALNGYAKLHLEDEASDMSALLQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V K ++N P Q+QI SL+YSSY+G IGIGRI G+IK+ V I++ D
Sbjct: 189 TIIEKVDPPKVDANGPFQMQISSLDYSSYVGTIGIGRITRGQIKAKSAVKIID-KDGNIR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ FKGL+R+ V EA +G+I+ ITGIE + I TICD + LP+L++DEPT+
Sbjct: 248 SGRLLQLLGFKGLERIEVEEANAGNIIAITGIEGLKISDTICDVNVVEALPVLSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R+I+ RL+ E+ +N+ LRV ++ D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGQEGKFVTSRKIRERLETELLHNVALRV-EDCDDPDKFRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREGYEL++S+P VI + ++GE EPYE+L VD+EE +QG IM+KL R G+L
Sbjct: 367 SILIETMRREGYELAISKPEVIIREVDGEQQEPYEHLTVDVEENHQGAIMEKLGERRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + K RVRL+Y IP+RGLIGF NEF++ T GTGL+ HV++ Y P K +GKR
Sbjct: 427 QNMVPDGKGRVRLDYMIPTRGLIGFHNEFLSSTSGTGLMYHVYDHYGPAI---KGRIGKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ G A A++L+ LQ+RGRLF+ + YEGMI+GIHSRDNDL+VN KEKQL
Sbjct: 484 TNGVLIANCQGMARAFALFNLQERGRLFVEPQTVCYEGMIVGIHSRDNDLVVNVTKEKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR+SGSDE I L +K+TLE A+EFI+DDELVE+TP +IR+RK+ LKE+ERKK
Sbjct: 544 TNIRASGSDENIILTPAVKLTLEQALEFIDDDELVEVTPDSIRIRKKSLKEHERKK 599
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + +E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQTGTLNERAPKVERVMDSNALEKERGITILAKNTCVYWKN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 HQINIVDTPGHADFGGEVERILSMVDSVLLLVDAVDGPMPQTRFVTQKAFARGLNPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|401765838|ref|YP_006580845.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400177372|gb|AFP72221.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 607
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ VP + + LQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDRVPAPNVDLDGTLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETQDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSIRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|410862790|ref|YP_006978024.1| BipA protein [Alteromonas macleodii AltDE1]
gi|410820052|gb|AFV86669.1| BipA protein [Alteromonas macleodii AltDE1]
Length = 610
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 439/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEQEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ ++ Q +M LFE
Sbjct: 133 KIDKPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWASHDADEPQEDMTALFE 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + P Q+QI L+Y+SY+G IG+GR+ G +K Q V ++ +K N
Sbjct: 193 TIVEQVSAPDADIDGPFQMQISQLDYNSYVGVIGVGRVKRGSVKPNQQVTVVTAEGEKRN 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL R V A +GDI+ ITG+ E+ I TICD + LP L +DEPT+
Sbjct: 253 -GKVGLVYGYLGLARHEVESAHAGDIIAITGLGELKISDTICDVNTVEALPPLTVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKYVTSRNILERLKDELVHNVALRVEEMPDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI K ++GE EPYE L +D EE +QG IM++L R ++
Sbjct: 371 GILIENMRREGYELAVSRPEVILKEVDGETQEPYETLTIDCEEQHQGSIMEQLGLRKAEM 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ IPSRGLIGFQ EF+T+T G+GL+ H F+ Y P+ +GKR
Sbjct: 431 TDMSPDGKGRVRIDFVIPSRGLIGFQTEFMTMTSGSGLLYHTFDHYGPYKGGI---IGKR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 KNGVLIANANGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PIK++LE A+EFI+DDELVE+TP++IR+RK+ L ENERK+
Sbjct: 548 TNVRASGTDEAQTLVPPIKMSLEQALEFIDDDELVEVTPESIRIRKKLLTENERKR 603
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEQEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 131
Query: 176 NKIDK 180
NKIDK
Sbjct: 132 NKIDK 136
>gi|385328910|ref|YP_005883213.1| initiation factor IF2 [Neisseria meningitidis alpha710]
gi|308389762|gb|ADO32082.1| initiation factor IF2 [Neisseria meningitidis alpha710]
Length = 962
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 447/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|161870487|ref|YP_001599659.1| translation initiation factor IF-2 [Neisseria meningitidis 053442]
gi|189028335|sp|A9M1D5.1|IF2_NEIM0 RecName: Full=Translation initiation factor IF-2
gi|161596040|gb|ABX73700.1| initiation factor IF2 [Neisseria meningitidis 053442]
Length = 962
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 447/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EA P
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEASP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|254482768|ref|ZP_05096006.1| GTP-binding protein TypA/BipA [marine gamma proteobacterium HTCC2148]
gi|214037127|gb|EEB77796.1| GTP-binding protein TypA/BipA [marine gamma proteobacterium HTCC2148]
Length = 603
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/596 (55%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+ E+ERGITI +KN +IE+N
Sbjct: 9 AIIAHVDHGKTTLVDCLLQQSGTLDRRAEGAERVMDSNDQERERGITILAKNTAIEWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA + G PIVVVN
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFEQGLNPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLFD+L A EEQLDFPVIY SA+ G + + + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFDRLGANEEQLDFPVIYASAIEGISGLDHEHMAADMQPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+++ VP K NS+ PLQ+QI +L+YSSY+G IG+GRI G++ V ++ G + +
Sbjct: 189 TVVEKVPAPKVNSDGPLQMQISALDYSSYVGVIGVGRITRGKLAPNTQVSVV-GIEGETR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+RV VN A +GDIV +TGI+ + I T+CDP+ LP L++DEPT+
Sbjct: 248 NGKVLQVMGYLGLERVDVNSAEAGDIVCVTGIDGLNISDTLCDPAAIEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGK++T+R IK RL+ E+ +N+ LR+ D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKYVTSRNIKERLERELIHNVALRIEPGDSPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE+MRREG+EL VSRP VI K ++G++ EPYE L +D E+ +QG +M++L R +L
Sbjct: 367 SVLIESMRREGFELGVSRPEVIQKEVDGQMQEPYEQLVIDCEDEHQGSLMEELGLRRAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + K RVRLE+ IP+RGLIGF+++F+T+T G+G+++HVF+ Y N ++ R
Sbjct: 427 ENMVPDGKGRVRLEFIIPARGLIGFRSQFLTMTSGSGIMTHVFDHYGAVKNA---EIIHR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S GK +AY L+ LQDRGRLF++ N VYEG ++G+HSR NDL VNP K KQL
Sbjct: 484 SNGVLVSMVKGKTLAYGLFNLQDRGRLFVDPNVDVYEGQVVGLHSRSNDLAVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A+ L P++ TLE A+EFI DDELVE+TP +IR+RK+ L+E+ER++
Sbjct: 544 TNVRASGTDDALTLTPPVRHTLEQALEFIEDDELVEVTPGSIRVRKKLLQEHERRR 599
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDCLLQQSGTLDRRAEGAERVMDSNDQERERGITILAKNTAIEWND 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR + A G+ IV +
Sbjct: 68 YHINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFEQGLNPIVVV 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|253995584|ref|YP_003047648.1| translation initiation factor IF-2 [Methylotenera mobilis JLW8]
gi|253982263|gb|ACT47121.1| translation initiation factor IF-2 [Methylotenera mobilis JLW8]
Length = 912
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/539 (60%), Positives = 431/539 (79%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVKS VIK LM +G MVTINQVLDQETA+I+VEEMGH A A+ NDP++F+ E +
Sbjct: 348 MSVKSGEVIKTLMGMGMMVTINQVLDQETAIIIVEEMGHKAQAAAPNDPDAFI--EETDH 405
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A R P+VT+MGHVDHGKTSLLDYIR++ V EAGGITQHIGAY+V T G +TF
Sbjct: 406 AEAVMETRPPVVTVMGHVDHGKTSLLDYIRRSRVATGEAGGITQHIGAYHVETPSGMVTF 465
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVV+ADDGVMPQT EAI HAK +GVPL+VAINKIDK
Sbjct: 466 LDTPGHEAFTAMRARGAKATDIVILVVSADDGVMPQTIEAIHHAKAAGVPLVVAINKIDK 525
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D + +R+K +L+S++V+PE++GG + F ++SAKTG GI+ LLE + LQAE+LEL+AP
Sbjct: 526 PDADPERVKMELVSQEVVPEDFGGDTMFRAVSAKTGQGIDDLLEAVLLQAEVLELQAPKN 585
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
TPAKG++IE RLDKG+G VAT+L+QSGTL+ D+++AG ++G++R+ML+E GK++ EAGP
Sbjct: 586 TPAKGLVIEGRLDKGRGSVATILVQSGTLKRGDMILAGTTFGKVRAMLDETGKDVQEAGP 645
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
S+PVEI GL+ VP +GEE+ V+ +E+KAREI LFRQGK+RDVKL+KQ+ K ENMF +
Sbjct: 646 SMPVEILGLSDVPSAGEEVIVLNDERKAREIALFRQGKYRDVKLAKQQAAKLENMFEQME 705
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V+ L +IIK+DV GS E L SL+ LST +VK+ +IH VG I+ESD+NLA ASKA+
Sbjct: 706 SGEVQTLGLIIKSDVQGSYEALATSLQKLSTSEVKVNIIHTGVGAISESDVNLAAASKAV 765
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGF+VRAD+ RKL +++RY+NIIY + EIK+ + ++ E+KE+++G E+R+
Sbjct: 766 LIGFSVRADSGARKLIDTLGVDVRYYNIIYEAVDEIKAALGGMLAPEQKESMIGTVEVRE 825
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V ++K+ IAGCY+ +G+I+R+SK+RILRN I+ TGELDSLKRFKD+VKEVK FEC
Sbjct: 826 VFRISKIGAIAGCYVQDGMIKRNSKVRILRNNVIVHTGELDSLKRFKDDVKEVKNNFEC 884
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R +R+ + GIT +E
Sbjct: 419 VMGHVDHGKTSLLDYIRR------------SRVATG----EAGGITQHIGAYHVETPSGM 462
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+ +DTPGH F R D V+L++ A +G MPQT A G +V +NK
Sbjct: 463 VTFLDTPGHEAFTAMRARGAKATDIVILVVSADDGVMPQTIEAIHHAKAAGVPLVVAINK 522
Query: 1047 IDRSNARPEWV 1057
ID+ +A PE V
Sbjct: 523 IDKPDADPERV 533
>gi|365847518|ref|ZP_09388005.1| GTP-binding protein TypA [Yokenella regensburgei ATCC 43003]
gi|364572297|gb|EHM49852.1| GTP-binding protein TypA [Yokenella regensburgei ATCC 43003]
Length = 607
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/598 (55%), Positives = 449/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ VP + + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVDRVPAPDVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDVAEAGDIIAITGLGELNISDTICDTQAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETADADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRKRAM 601
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|429743665|ref|ZP_19277209.1| translation initiation factor IF-2 [Neisseria sp. oral taxon 020
str. F0370]
gi|429164784|gb|EKY06884.1| translation initiation factor IF-2 [Neisseria sp. oral taxon 020
str. F0370]
Length = 959
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/561 (59%), Positives = 441/561 (78%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ LDQ+TA+I+VEE+GH+ + +DPE+FL + ++
Sbjct: 394 MAVKGVEVVKALMKMGMMVTINQSLDQDTALIVVEELGHIGKPAAADDPEAFLEDGAAQS 453
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G +TF
Sbjct: 454 -DAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVNTPRGVVTF 512
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 513 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 572
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +VI + +GG F+ +SAK G I+ LLE + L+AE+LELKAPV
Sbjct: 573 EAANPERIRQELTAHEVIDQVWGGDVQFVDVSAKKGTNIDALLEAVLLEAEVLELKAPVA 632
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M +ENGK I EAGP
Sbjct: 633 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMTDENGKAISEAGP 692
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMF+++
Sbjct: 693 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFSNMG 752
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L+ SLK LSTD+V++ V+H+ VG I ESD+NLAIAS A
Sbjct: 753 ENQAQSLSVIIKADVQGSYEALSGSLKKLSTDEVRVNVLHSGVGGITESDVNLAIASGAF 812
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 813 IIGFNVRADASARKLAENEDVEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQITGTVEIRQ 872
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +GL++RDS IR++RN +I TGEL SLKRFKD+VKEV+ GFEC
Sbjct: 873 VISVSKVGNIAGCMVTDGLVKRDSHIRLIRNNVVIHTGELSSLKRFKDDVKEVRMGFECG 932
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 933 LMIKGYNEIMEG-DQLECFDI 952
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + + RG+ F
Sbjct: 466 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVNTPRGVVTF------------ 512
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 513 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 569
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 570 IDKEAANPERI 580
>gi|423111131|ref|ZP_17098826.1| GTP-binding protein TypA/BipA [Klebsiella oxytoca 10-5243]
gi|423117143|ref|ZP_17104834.1| GTP-binding protein TypA/BipA [Klebsiella oxytoca 10-5245]
gi|376376444|gb|EHS89222.1| GTP-binding protein TypA/BipA [Klebsiella oxytoca 10-5245]
gi|376377148|gb|EHS89920.1| GTP-binding protein TypA/BipA [Klebsiella oxytoca 10-5243]
Length = 607
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/598 (55%), Positives = 449/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 TIVDRVPAPNVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDIAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETPDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRAGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKRAM 601
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEAQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|397162838|ref|ZP_10486305.1| GTP-binding protein TypA/BipA [Enterobacter radicincitans DSM 16656]
gi|396095603|gb|EJI93146.1| GTP-binding protein TypA/BipA [Enterobacter radicincitans DSM 16656]
Length = 607
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/598 (55%), Positives = 451/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGMDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + LQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPNVDLDGTLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSEIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRRQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPLSIRIRKRHLTENDRKRAM 601
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDERAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|385855663|ref|YP_005902176.1| translation initiation factor IF-2 [Neisseria meningitidis
M01-240355]
gi|325204604|gb|ADZ00058.1| translation initiation factor IF-2 [Neisseria meningitidis
M01-240355]
Length = 962
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/561 (59%), Positives = 447/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+L+VAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILMVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILMVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|385338482|ref|YP_005892355.1| translation initiation factor IF-2 [Neisseria meningitidis WUE
2594]
gi|433480257|ref|ZP_20437542.1| translation initiation factor IF-2 [Neisseria meningitidis 63041]
gi|433516109|ref|ZP_20472874.1| translation initiation factor IF-2 [Neisseria meningitidis 2004090]
gi|433528738|ref|ZP_20485346.1| translation initiation factor IF-2 [Neisseria meningitidis NM3652]
gi|433530947|ref|ZP_20487531.1| translation initiation factor IF-2 [Neisseria meningitidis NM3642]
gi|433533215|ref|ZP_20489774.1| translation initiation factor IF-2 [Neisseria meningitidis 2007056]
gi|433534890|ref|ZP_20491426.1| translation initiation factor IF-2 [Neisseria meningitidis 2001212]
gi|433541527|ref|ZP_20497974.1| translation initiation factor IF-2 [Neisseria meningitidis 63006]
gi|319410896|emb|CBY91290.1| translation initiation factor IF-2 [Neisseria meningitidis WUE
2594]
gi|432214589|gb|ELK70487.1| translation initiation factor IF-2 [Neisseria meningitidis 63041]
gi|432252027|gb|ELL07386.1| translation initiation factor IF-2 [Neisseria meningitidis 2004090]
gi|432264417|gb|ELL19621.1| translation initiation factor IF-2 [Neisseria meningitidis NM3652]
gi|432265447|gb|ELL20641.1| translation initiation factor IF-2 [Neisseria meningitidis 2007056]
gi|432265757|gb|ELL20949.1| translation initiation factor IF-2 [Neisseria meningitidis NM3642]
gi|432270640|gb|ELL25776.1| translation initiation factor IF-2 [Neisseria meningitidis 2001212]
gi|432276650|gb|ELL31706.1| translation initiation factor IF-2 [Neisseria meningitidis 63006]
Length = 962
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/561 (59%), Positives = 445/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+L+VAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILMVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGYNEIMEG-DQLECFDI 955
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILMVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|416182296|ref|ZP_11611966.1| translation initiation factor IF-2 [Neisseria meningitidis M13399]
gi|325134691|gb|EGC57330.1| translation initiation factor IF-2 [Neisseria meningitidis M13399]
Length = 962
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 444/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ + +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMALADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDTANPERI 583
>gi|260770759|ref|ZP_05879688.1| GTP-binding protein TypA/BipA [Vibrio furnissii CIP 102972]
gi|375129627|ref|YP_004991725.1| GTP-binding protein [Vibrio furnissii NCTC 11218]
gi|260613996|gb|EEX39186.1| GTP-binding protein TypA/BipA [Vibrio furnissii CIP 102972]
gi|315178799|gb|ADT85713.1| GTP-binding protein [Vibrio furnissii NCTC 11218]
Length = 609
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/596 (56%), Positives = 439/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I ++
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWHDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD V L++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDCVCLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + PLQ+QI L+YSSY+G IG+GR+ G +K Q V +++ D K
Sbjct: 193 AIVDNVEPPQVDLEGPLQMQISQLDYSSYVGVIGVGRVTRGTVKPNQQVTVVSA-DGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL R +A +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKVGTVLGYLGLQRSETEQATAGDIVAITGLGELKISDTICDVNCIEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K NG+L EP+E + +D+ E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKEENGQLMEPFETVTIDVLEEHQGGIMEKIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRLDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG I+GIH+R NDL VN +K KQL
Sbjct: 488 VNGVLISNATGKALTYALFNLQERGRLFTEHADEVYEGQIVGIHNRSNDLTVNCLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L IK TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 548 TNVRASGTDEAQVLTPAIKYTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 603
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWHD 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDCVCLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|448747902|ref|ZP_21729554.1| GTP-binding protein TypA [Halomonas titanicae BH1]
gi|445564550|gb|ELY20669.1| GTP-binding protein TypA [Halomonas titanicae BH1]
Length = 667
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/601 (55%), Positives = 449/601 (74%), Gaps = 10/601 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL QSGT + RIMDSN+ EKERGITI +KN +I++
Sbjct: 68 AIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERIMDSNDQEKERGITILAKNTAIQWQDS 127
Query: 983 --NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
N INI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA G KP
Sbjct: 128 QGNDYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKP 187
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
IVVVNKIDR ARP+WV+D FDLFD L A++EQLDFP+IY SAL+G A + + NM
Sbjct: 188 IVVVNKIDRPGARPDWVIDQIFDLFDNLGASDEQLDFPIIYCSALNGIAGMDPEELADNM 247
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
P+F+AI+ V K + P Q+QI +L+Y+SY+G IG+GRI G +K Q V I+ G
Sbjct: 248 DPMFQAIVDIVEPPKVELDGPFQMQISALDYNSYVGVIGLGRIKRGAVKPNQQVSII-GV 306
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
D K KI Q+ GL+RV NEA +GDIV +TGI+++ I T+CDP+K LP L++
Sbjct: 307 DGNVRKGKIGQVMTHMGLERVQTNEATAGDIVCVTGIDDLSISDTLCDPAKVEALPPLSV 366
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT+++ F VN+SP AG++GKF+T+R IK+RLD E+ +N+ LRV Q + + ++VSGR
Sbjct: 367 DEPTVSMTFQVNDSPFAGKDGKFVTSRNIKDRLDQELIHNVALRVEQGETPEK-FKVSGR 425
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY 1340
GELHL++LIE MRREG+EL+V RP VI K ++GE EPYE + +D EE +QG IM++L Y
Sbjct: 426 GELHLSVLIETMRREGFELAVGRPEVIIKEIDGEKQEPYEEVIIDCEEQHQGSIMEELGY 485
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R G++ N+ + K RVRL++ IP+RGLIGF+ +F+TLT GTG+++ F+ Y P ++
Sbjct: 486 RKGEMTNMLPDGKGRVRLDFIIPARGLIGFRGQFLTLTSGTGILTSRFDHYGPLKPEASI 545
Query: 1401 DLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPI 1460
+ RRNGVL+S GKA+AY+L+ LQ+RG+L I+H VYEGM+IGI++R ND++VNP
Sbjct: 546 E---RRNGVLVSMVDGKALAYALYALQERGKLIIDHATEVYEGMLIGINNRANDMVVNPT 602
Query: 1461 KEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
K K+L N+RS+G+DE I L P+K +LE AIEF++ DELVE+TP +IRLRK+ LKE ERK
Sbjct: 603 KGKKLDNMRSTGNDENIVLTPPVKFSLEQAIEFLDSDELVEVTPAHIRLRKKLLKETERK 662
Query: 1521 K 1521
+
Sbjct: 663 R 663
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GIT-----QHIGAYN 110
V I+ HVDHGKT+L+D + + GIT I +
Sbjct: 67 VAIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERIMDSNDQEKERGITILAKNTAIQWQD 126
Query: 111 VVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
N I +DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 127 SQGNDYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLK 186
Query: 171 LIVAINKIDK 180
IV +NKID+
Sbjct: 187 PIVVVNKIDR 196
>gi|296315228|ref|ZP_06865169.1| translation initiation factor IF-2 [Neisseria polysaccharea ATCC
43768]
gi|296837866|gb|EFH21804.1| translation initiation factor IF-2 [Neisseria polysaccharea ATCC
43768]
Length = 962
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 444/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQITGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGYNEIMEG-DQLECFDI 955
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDTANPERI 583
>gi|188532196|ref|YP_001905993.1| GTP-binding protein TypA/BipA [Erwinia tasmaniensis Et1/99]
gi|188027238|emb|CAO95077.1| GTP-binding protein typA/bipA (Tyrosine phosphorylated protein A)
[Erwinia tasmaniensis Et1/99]
Length = 607
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFPVIY SAL+G A + +M PL+E
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPVIYASALNGIAGLDHSDMAEDMTPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVKHVSPPQVEMEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIEATEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRAGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSVRIRKRHLTENDRKR 599
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|433513989|ref|ZP_20470776.1| translation initiation factor IF-2 [Neisseria meningitidis 63049]
gi|432246300|gb|ELL01753.1| translation initiation factor IF-2 [Neisseria meningitidis 63049]
Length = 962
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/539 (61%), Positives = 435/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+L+VAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILMVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFEC 934
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILMVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|89900918|ref|YP_523389.1| translation initiation factor IF-2 [Rhodoferax ferrireducens T118]
gi|123278782|sp|Q21WJ5.1|IF2_RHOFD RecName: Full=Translation initiation factor IF-2
gi|89345655|gb|ABD69858.1| bacterial translation initiation factor 2 (bIF-2) [Rhodoferax
ferrireducens T118]
Length = 978
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/539 (63%), Positives = 446/539 (82%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK+LMKLGQMVTINQ LDQ+TAMILVEEMGH A + L+DPE+F ++E ++
Sbjct: 413 MAVKASEVIKHLMKLGQMVTINQPLDQDTAMILVEEMGHKAIVAALDDPEAFTVDEVSQQ 472
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ESL RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T+ G I+F
Sbjct: 473 -QSESLPRAPVVTVMGHVDHGKTSLLDYIRRAKVATGEAGGITQHIGAYHVETDRGMISF 531
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT+EAI HA+ +GVP++VAINKIDK
Sbjct: 532 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIKHARAAGVPIVVAINKIDK 591
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+K +L+ E+V+PEE+GG SPF+ +SAKTG GI+ LLE + LQAE+LELKAPV
Sbjct: 592 PDANPERVKNELVVEEVVPEEFGGDSPFVPVSAKTGQGIDALLEQVLLQAEVLELKAPVD 651
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ DIV+AG++YGR+R+ML+ENG+ I AGP
Sbjct: 652 AMAKGLVIEAQLDKGRGPVATVLVQSGTLKTGDIVLAGSTYGRVRAMLDENGRTIKTAGP 711
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR KL+KQ+ K ENMF D+
Sbjct: 712 SIPVEIQGLTEVPQAGDEFMVMADERRAREIATYRAGKFRHTKLAKQQAAKLENMFTDMA 771
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK + IIIK DV GS+E L +SL LSTD+VK+Q+++ AVG I+ESD+NLAIASKA+
Sbjct: 772 AGEVKMVPIIIKADVQGSQEALAQSLLKLSTDEVKVQLVYTAVGAISESDVNLAIASKAV 831
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFN RADA RKLA+ N ++IRY++IIY+ + E+K ++ ++ +KKE ++G AEIRQ
Sbjct: 832 IIGFNTRADAGARKLAENNGVDIRYYDIIYDAVDELKLAMSGMLTPDKKEEVIGTAEIRQ 891
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ V+K+ IAGC + G++RR +++R+LR+ +I+TGELDSLKRFKD+V+EV+ GF+C
Sbjct: 892 IFKVSKIGSIAGCMVTAGVVRRTARLRLLRDNMVIFTGELDSLKRFKDDVREVREGFDC 950
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 16/129 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +RG+
Sbjct: 485 VMGHVDHGKTSLLDYIRRAKVATGEAGGITQHI-GAYHVETDRGM--------------- 528
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I+ +DTPGH F R D V+L++ A +G MPQT+ + A G +V +NK
Sbjct: 529 ISFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIKHARAAGVPIVVAINK 588
Query: 1047 IDRSNARPE 1055
ID+ +A PE
Sbjct: 589 IDKPDANPE 597
>gi|261250582|ref|ZP_05943157.1| GTP-binding protein TypA/BipA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|417953443|ref|ZP_12596489.1| BipA protein [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260939151|gb|EEX95138.1| GTP-binding protein TypA/BipA [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|342817317|gb|EGU52201.1| BipA protein [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 609
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 443/597 (74%), Gaps = 5/597 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEVEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATLEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVDVVDAPNVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R ++EA +GDI+ ITG+ E+ I TIC ++ LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEISEANAGDIIAITGLGELKISDTICAQNQVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVLEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+R
Sbjct: 431 KDMAPDGKGRVRMDFDMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGGQ---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGMIIGIHSRDNDL VN +K KQL
Sbjct: 488 INGVLIANAAGKALTNALFNLQERGRLFIGHGVEVYEGMIIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
TN+R+SG+D+A L PIK TLE A+EFI++DELVE+TP++IR+RK+FL E++RK++
Sbjct: 548 TNVRASGTDDAQVLTPPIKHTLEQALEFIDEDELVEVTPESIRIRKKFLTESDRKRE 604
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEVEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|313199847|ref|YP_004038505.1| translation initiation factor if-2 [Methylovorus sp. MP688]
gi|312439163|gb|ADQ83269.1| translation initiation factor IF-2 [Methylovorus sp. MP688]
Length = 914
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/539 (62%), Positives = 438/539 (81%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK LMK+G MVTINQVLDQETA+ILVEEMGHVA A+ NDPE+FL E + +
Sbjct: 350 MAVKASEVIKVLMKMGMMVTINQVLDQETAIILVEEMGHVAKAAAANDPETFL--EEHDH 407
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A R P+VT+MGHVDHGKTSLLDYIR++ V EAGGITQHIGAY+V T G +TF
Sbjct: 408 AEAIQEARPPVVTVMGHVDHGKTSLLDYIRRSRVASGEAGGITQHIGAYHVETPRGMVTF 467
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TD+V+LVVAADDGVMPQT EA+ HAK +GVP++VA+NKIDK
Sbjct: 468 LDTPGHEAFTAMRARGAKATDVVILVVAADDGVMPQTIEAVHHAKAAGVPVVVAVNKIDK 527
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+L++ +V+PE++GG + F+ +SAK G GI++LLE + LQAE+LELKAP
Sbjct: 528 PDANPERVKQELVTHEVVPEDWGGDTMFVEVSAKAGTGIDELLEAVLLQAEVLELKAPKN 587
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
TPAKG++IE RLDKG+GPV+T+L+QSGTLR D+++AG ++GR+R+ML+E G +I EAGP
Sbjct: 588 TPAKGLVIEGRLDKGRGPVSTILVQSGTLRRGDMLLAGTAFGRVRAMLDEAGNDIKEAGP 647
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENMF +
Sbjct: 648 SIPVEILGLSDVPSAGEEVIVLNDERKAREIALFRQGKFRDVKLAKQQAAKLENMFEQMA 707
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK+DV GS E L SL+ LST++VK+ +IH VG I+ESD+NLA ASKA+
Sbjct: 708 EGEVKVLPLIIKSDVQGSYEALATSLQKLSTNEVKVNIIHTGVGAISESDVNLAAASKAV 767
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKL + +++RY+NIIY + E+K+ + ++ E+KE+++G EIR+
Sbjct: 768 VIGFNVRADAGARKLIDSSGVDVRYYNIIYEAVDEVKAALGGMLSPEQKESMIGTVEIRE 827
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V ++KV +AGCY+ +G+IRR SK+R+LR+ +I TGELDSLKRFKD+VKEVK+ FEC
Sbjct: 828 VFRISKVGAVAGCYVSDGVIRRSSKVRVLRDNVVIHTGELDSLKRFKDDVKEVKSNFEC 886
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 421 VMGHVDHGKTSLLDYIRRSRVASGEAGGITQHI-GAYHVETPRGMVTF------------ 467
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 468 ---LDTPGHEAFTAMRARGAKATDVVILVVAADDGVMPQTIEAVHHAKAAGVPVVVAVNK 524
Query: 1047 IDRSNARPEWV 1057
ID+ +A PE V
Sbjct: 525 IDKPDANPERV 535
>gi|329296753|ref|ZP_08254089.1| GTP-binding protein [Plautia stali symbiont]
Length = 606
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF +MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATECVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM+D+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMLDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHTDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + PLQ+QI L+Y++YLG IGIGRI G++K Q V +++ + K
Sbjct: 189 AIVDHVSPPQVEVEAPLQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTVIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIESDLAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKFVTSRQILERLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL+VSRP+VIF+ G EP+EN+ +DIEE +QG +MQ + R GDL
Sbjct: 367 SVLIENMRREGYELAVSRPKVIFREFEGRKQEPFENVTLDIEETHQGSVMQAMGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P K+TLE AIEFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPQKMTLEQAIEFIDDDELVEVTPQSVRIRKRHLTENDRKR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATECVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMLDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|381403366|ref|ZP_09928050.1| GTP-binding protein TypA [Pantoea sp. Sc1]
gi|380736565|gb|EIB97628.1| GTP-binding protein TypA [Pantoea sp. Sc1]
Length = 607
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+I+ SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIFASALNGIAGLDHTDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + PLQ+QI L+Y++YLG IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSPPQVEVEAPLQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDLAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ G EP+EN+ +DIEE +QG +MQ + R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREFEGRKQEPFENVTLDIEETHQGSVMQAMGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYDDI---RQGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P K+TLE AIEFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPQKMTLEQAIEFIDDDELVEVTPLSVRIRKRHLTENDRKR 599
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|433476089|ref|ZP_20433426.1| translation initiation factor IF-2 [Neisseria meningitidis 88050]
gi|433518067|ref|ZP_20474809.1| translation initiation factor IF-2 [Neisseria meningitidis 96023]
gi|433524534|ref|ZP_20481192.1| translation initiation factor IF-2 [Neisseria meningitidis 97020]
gi|432209198|gb|ELK65169.1| translation initiation factor IF-2 [Neisseria meningitidis 88050]
gi|432252585|gb|ELL07938.1| translation initiation factor IF-2 [Neisseria meningitidis 96023]
gi|432258761|gb|ELL14042.1| translation initiation factor IF-2 [Neisseria meningitidis 97020]
Length = 962
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 445/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDTANPERI 583
>gi|350426829|ref|XP_003494556.1| PREDICTED: GTP-binding protein typA/BipA-like [Bombus impatiens]
Length = 810
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/601 (57%), Positives = 448/601 (74%), Gaps = 10/601 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + R+MDSN +EKERGITI +KN +I++N
Sbjct: 211 AIIAHVDHGKTTLVDKLLQQSGTLGEQRGDETERVMDSNALEKERGITILAKNTAIKWND 270
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+
Sbjct: 271 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAHGLKPIVVI 330
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ + +M PLF
Sbjct: 331 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGIAGEDHENMADDMTPLF 390
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K + + P Q+QI L+Y++Y+G IGIGRI GRIK Q ++I+ DDK
Sbjct: 391 EAIVKYVEPPKVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGRIKPNQQMIII---DDKG 447
Query: 1165 NK--AKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDE 1222
K AK+ Q+ GL R EA +GDI+ +TG+ E+ I TICDPS LP L +DE
Sbjct: 448 QKRNAKVGQVLGHLGLQRYEATEAEAGDIIALTGLGELNISDTICDPSAVEALPALTVDE 507
Query: 1223 PTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGE 1282
PT+T+ F VN+SP AG+EGKF+T+RQI +RL E+ +N+ LRV + D+ + VSGRGE
Sbjct: 508 PTVTMFFNVNSSPFAGKEGKFVTSRQILDRLKKELVHNVALRVEETPDPDA-FRVSGRGE 566
Query: 1283 LHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRG 1342
LHL++LIENMRREGYEL+VSRP+VI++ ++G EP+E + +D+EE +QG +M+ L R
Sbjct: 567 LHLSVLIENMRREGYELAVSRPKVIYREVDGRKQEPFEQVTIDVEEQHQGPVMEALGLRK 626
Query: 1343 GDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
G+L N+ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++
Sbjct: 627 GNLTNMLPDGKGRVRLDYDIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEI 683
Query: 1403 GKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKE 1462
G+R NGVLIS +GKA+ Y+L LQDRGRL I H VYEG IIGIH+R NDL VN +
Sbjct: 684 GQRINGVLISNGTGKALEYALHGLQDRGRLLIGHGVEVYEGQIIGIHTRSNDLTVNCLTG 743
Query: 1463 KQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
K+LTN+R+SGSDEA L PIK+TLE ++EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 744 KKLTNMRASGSDEATTLSPPIKMTLEQSLEFIDDDELVEVTPLSVRIRKRHLTENDRKRA 803
Query: 1523 L 1523
Sbjct: 804 F 804
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D ++++ + + G T+ + N + IT L
Sbjct: 210 IAIIAHVDHGKTTLVDKLLQQSGTLGEQRGDETERVMDSNALEKERGITILAKNTAIKWN 269
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+L+V A DG MPQTR A G+ IV
Sbjct: 270 DYRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAHGLKPIVV 329
Query: 175 INKIDK 180
INK+D+
Sbjct: 330 INKVDR 335
>gi|253997783|ref|YP_003049846.1| translation initiation factor IF-2 [Methylovorus glucosetrophus
SIP3-4]
gi|253984462|gb|ACT49319.1| translation initiation factor IF-2 [Methylovorus glucosetrophus
SIP3-4]
Length = 914
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/539 (62%), Positives = 438/539 (81%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK+S VIK LMK+G MVTINQVLDQETA+ILVEEMGHVA A+ NDPE+FL E + +
Sbjct: 350 MAVKASEVIKVLMKMGMMVTINQVLDQETAIILVEEMGHVAKAAAANDPETFL--EEHDH 407
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A R P+VT+MGHVDHGKTSLLDYIR++ V EAGGITQHIGAY+V T G +TF
Sbjct: 408 AEAIQEARPPVVTVMGHVDHGKTSLLDYIRRSRVASGEAGGITQHIGAYHVETPRGMVTF 467
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TD+V+LVVAADDGVMPQT EA+ HAK +GVP++VA+NKIDK
Sbjct: 468 LDTPGHEAFTAMRARGAKATDVVILVVAADDGVMPQTIEAVHHAKAAGVPVVVAVNKIDK 527
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+L++ +V+PE++GG + F+ +SAK G GI++LLE + LQAE+LELKAP
Sbjct: 528 PDANPERVKQELVTHEVVPEDWGGDTMFVEVSAKAGTGIDELLEAVLLQAEVLELKAPKN 587
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
TPAKG++IE RLDKG+GPV+T+L+QSGTLR D+++AG ++GR+R+ML+E G +I EAGP
Sbjct: 588 TPAKGLVIEGRLDKGRGPVSTILVQSGTLRRGDMLLAGTAFGRVRAMLDEAGNDIKEAGP 647
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GEE+ V+ +E+KAREI LFRQGKFRDVKL+KQ+ K ENMF +
Sbjct: 648 SIPVEILGLSDVPSAGEEVIVLNDERKAREIALFRQGKFRDVKLAKQQAAKLENMFEQMA 707
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L +IIK+DV GS E L SL+ LST++VK+ +IH VG I+ESD+NLA ASKA+
Sbjct: 708 EGEVKVLPLIIKSDVQGSYEALATSLQKLSTNEVKVNIIHTGVGAISESDVNLAAASKAV 767
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKL + +++RY+NIIY + E+K+ + ++ E+KE+++G EIR+
Sbjct: 768 VIGFNVRADAGARKLIDSSGVDVRYYNIIYEAVDEVKAALGGMLSPEQKESMIGTVEIRE 827
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V ++KV +AGCY+ +G+IRR SK+R+LR+ +I TGELDSLKRFKD+VKEVK+ FEC
Sbjct: 828 VFRISKVGAVAGCYVSDGVIRRSSKVRVLRDNVVIHTGELDSLKRFKDDVKEVKSNFEC 886
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 421 VMGHVDHGKTSLLDYIRRSRVASGEAGGITQHI-GAYHVETPRGMVTF------------ 467
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 468 ---LDTPGHEAFTAMRARGAKATDVVILVVAADDGVMPQTIEAVHHAKAAGVPVVVAVNK 524
Query: 1047 IDRSNARPEWV 1057
ID+ +A PE V
Sbjct: 525 IDKPDANPERV 535
>gi|339048652|ref|ZP_08647533.1| GTP-binding protein TypA/BipA [gamma proteobacterium IMCC2047]
gi|330722144|gb|EGH00048.1| GTP-binding protein TypA/BipA [gamma proteobacterium IMCC2047]
Length = 606
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/604 (55%), Positives = 442/604 (73%), Gaps = 5/604 (0%)
Query: 918 NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKN 977
NI L AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+ EKERGITI +KN
Sbjct: 4 NISKLRNIAIIAHVDHGKTTLVDKLLQQSGTLDRKDQGTERLMDSNDQEKERGITILAKN 63
Query: 978 CSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLG 1037
+IE+N INI+DTPGHADFGGEVER+LSMVD VLLL+DAV+GPMPQTRFVT KA + G
Sbjct: 64 TAIEWNDYHINIVDTPGHADFGGEVERVLSMVDCVLLLVDAVDGPMPQTRFVTSKAFEQG 123
Query: 1038 FKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQ 1097
+PIVVVNK+DR +RP+WVVD FDLFD+L AT+EQLDFP++Y SA++G A +
Sbjct: 124 LRPIVVVNKVDRPGSRPDWVVDQVFDLFDRLGATDEQLDFPIVYASAINGIAGMEADDMA 183
Query: 1098 GNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIM 1157
+M PLFE I + VP + P Q+QI +L+Y SY+G IG+GRI G +K Q VV+
Sbjct: 184 EDMTPLFEMITENVPAPDVDPEAPFQMQISALDYDSYVGVIGVGRITRGSLKPNQQVVVK 243
Query: 1158 NGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPM 1217
+ D K K+ ++ + GLDRV NEA +GDIV I GI+ + I T+CDP LP
Sbjct: 244 DA-DGNERKGKVLNVKGYLGLDRVDTNEASAGDIVCINGIDGLGISDTLCDPEHVEALPP 302
Query: 1218 LNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEV 1277
L++DEPT+++NF+VN+SP AG++GKF+ T IK+RLD E+ +N+ LRV D + V
Sbjct: 303 LSVDEPTVSVNFIVNDSPFAGQDGKFVPTLNIKDRLDQELIHNVALRVEPGDTPDK-FIV 361
Query: 1278 SGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQK 1337
SGRGELHL++LIE MRREG+EL+VSRP V+ K ++G L EPYE++ +D+EE +QG IM++
Sbjct: 362 SGRGELHLSVLIETMRREGFELAVSRPEVVQKEIDGVLQEPYEHVVIDVEEQHQGSIMEE 421
Query: 1338 LNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNK 1397
L R G++ N+E + K RV+LE+ IP+RGLIGF+ F+TLT G+G++S F+ Y
Sbjct: 422 LGLRKGEMTNMEPDGKGRVKLEFVIPARGLIGFRGLFMTLTSGSGIMSSTFDHYGEVKGG 481
Query: 1398 SKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLV 1457
++ R NGVL+S GK AY+L+ LQDRGRLF+ H + +YEG IIG++SR ND+ V
Sbjct: 482 ---EMTTRTNGVLVSMVKGKTAAYALYNLQDRGRLFMGHAEDIYEGQIIGLNSRSNDMPV 538
Query: 1458 NPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKEN 1517
NP K KQLTN+R+SG+DEA+ L PI+ TLE A+EFI DDELVE+TP +IRLRK+ L EN
Sbjct: 539 NPSKGKQLTNVRASGTDEALTLTPPIRCTLEQALEFIEDDELVEVTPNHIRLRKKLLTEN 598
Query: 1518 ERKK 1521
ERK+
Sbjct: 599 ERKR 602
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + T+ + N IT L
Sbjct: 11 IAIIAHVDHGKTTLVDKLLQQSGTLDRKDQGTERLMDSNDQEKERGITILAKNTAIEWND 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G+ IV +
Sbjct: 71 YHINIVDTPGHADFGGEVERVLSMVDCVLLLVDAVDGPMPQTRFVTSKAFEQGLRPIVVV 130
Query: 176 NKIDK 180
NK+D+
Sbjct: 131 NKVDR 135
>gi|332142585|ref|YP_004428323.1| BipA protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327552607|gb|AEA99325.1| BipA protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 610
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 439/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEQEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ ++ + +M LFE
Sbjct: 133 KIDKPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWASHDADEPKEDMTALFE 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + P Q+QI L+Y+SY+G IG+GR+ G +K Q V ++ +K N
Sbjct: 193 TIVEQVSAPDADIDGPFQMQISQLDYNSYVGVIGVGRVKRGSVKPNQQVTVVTAEGEKRN 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL R V A +GDI+ ITG+ E+ I TICD + LP L +DEPT+
Sbjct: 253 -GKVGLVYGYLGLARHEVESAHAGDIIAITGLGELKISDTICDVNTVEALPPLTVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKYVTSRNILERLKDELVHNVALRVEEMPDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI K ++GE EPYE L +D EE +QG IM++L R ++
Sbjct: 371 GILIENMRREGYELAVSRPEVILKEVDGETQEPYETLTIDCEEQHQGSIMEQLGLRKAEM 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ IPSRGLIGFQ EF+T+T G+GL+ H F+ Y P+ +GKR
Sbjct: 431 TDMSPDGKGRVRIDFVIPSRGLIGFQTEFMTMTSGSGLLYHTFDHYGPYKGGI---IGKR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 KNGVLIANANGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PIK++LE A+EFI+DDELVE+TP++IR+RK+ L ENERK+
Sbjct: 548 TNVRASGTDEAQTLVPPIKMSLEQALEFIDDDELVEVTPESIRIRKKLLTENERKR 603
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEQEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 131
Query: 176 NKIDK 180
NKIDK
Sbjct: 132 NKIDK 136
>gi|262273179|ref|ZP_06050995.1| GTP-binding protein TypA/BipA [Grimontia hollisae CIP 101886]
gi|262222757|gb|EEY74066.1| GTP-binding protein TypA/BipA [Grimontia hollisae CIP 101886]
Length = 609
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 439/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLETRGEHEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V +++ PLQ+QI L+YSSY+G IG+GR+ G ++ Q V I+ G D K
Sbjct: 193 AIVDNVSAPDVDTDGPLQMQISQLDYSSYVGVIGVGRVTRGSVRPNQQVTIV-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKVGTVLGYLGLERHDVEVATAGDIIAITGLGELKISDTICDVNAVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLQKELVHNVALRVEETEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K ++GE EP+E + +D+ E +QG +M+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKDVDGEKQEPFETVTIDVLEEHQGGVMEKIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GLI H F+ Y P +G+R
Sbjct: 431 TDMSPDGKGRVRMDFIMPSRGLIGFQTEFMTLTSGSGLIYHTFDHYGPMKPGM---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG +IGIHSR NDL VN +K KQL
Sbjct: 488 QNGVLISNATGKALTYALFNLQERGRLFAEHADEVYEGQVIGIHSRSNDLTVNCLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L IK TLE A+EFI+DDELVE+TP++IR+RK+ L E +RK+
Sbjct: 548 TNVRASGTDDAQVLTPAIKFTLEQALEFIDDDELVEVTPQSIRIRKKLLTETDRKR 603
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLETRGEHEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|385786664|ref|YP_005817773.1| Tyrosine phosphorylated protein A [Erwinia sp. Ejp617]
gi|310765936|gb|ADP10886.1| Tyrosine phosphorylated protein A [Erwinia sp. Ejp617]
Length = 607
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 450/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFPVIY SAL+G A + +M PL+E
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPVIYASALNGIAGLDHSDMAEDMTPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVKHVSPPQVEMEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ +EA +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDASEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFEIAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRAGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSVRIRKRHLTENDRKR 599
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|90581075|ref|ZP_01236875.1| GTP-binding protein TypA/BipA [Photobacterium angustum S14]
gi|90437771|gb|EAS62962.1| GTP-binding protein TypA/BipA [Vibrio angustum S14]
Length = 608
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/608 (56%), Positives = 446/608 (73%), Gaps = 5/608 (0%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
+S+++I L AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI
Sbjct: 1 MSNQSIDKLRNIAIIAHVDHGKTTLVDKLLQQSGTLEGRGEAEERVMDSNDIEKERGITI 60
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+KN +I +N RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA
Sbjct: 61 LAKNTAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
G KPIVV+NKIDR ARPEWV+D FDLFD L AT+EQLDF V+Y SAL+G+A
Sbjct: 121 FAYGLKPIVVINKIDRPGARPEWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLEE 180
Query: 1094 KARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
NM PLF++I+ V + + PLQ+QI L+YSSY+G IG+ RI G +K+ Q
Sbjct: 181 GETGENMEPLFQSIVDNVAAPSVDVDGPLQMQISQLDYSSYVGVIGVARITRGTVKTNQQ 240
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPN 1213
V I++ K N K+ + + GL+R V EA +GDI+ ITG+ E+ I TICD +
Sbjct: 241 VTIVSADGSKRN-GKVGTVLGYLGLERHEVEEAKAGDIIAITGLGELKISDTICDQNCVE 299
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
L L++DEPT+T+ F VNNSP AG+EGK++T+R I RL E+ +N+ LRV + + D
Sbjct: 300 ALTPLSVDEPTVTMTFQVNNSPFAGKEGKYVTSRNILERLQKELVHNVALRVEETEDPDK 359
Query: 1274 IYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGI 1333
+ VSGRGELHL+ILIENMRREGYEL+VSRP VI K +G+L EP+E + +D+ E +QG
Sbjct: 360 -FRVSGRGELHLSILIENMRREGYELAVSRPEVIIKEEDGQLMEPFETVTIDVVEEHQGG 418
Query: 1334 IMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
IM+ + R G+L ++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P
Sbjct: 419 IMENIGLRKGELTDMAPDGKGRVRMDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGP 478
Query: 1394 FYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDN 1453
+ +G+R NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG IIGIH+R N
Sbjct: 479 HKGGT---IGQRNNGVLISNATGKALTYALFNLQERGRLFAEHADEVYEGQIIGIHNRSN 535
Query: 1454 DLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRF 1513
DL VN +K KQLTN+R+SG+DEA L IK TLE A+EFI++DELVE+TP+NIR+RK+
Sbjct: 536 DLTVNCLKGKQLTNVRASGTDEAQTLSPAIKYTLEQALEFIDNDELVEVTPENIRIRKKL 595
Query: 1514 LKENERKK 1521
L EN+RK+
Sbjct: 596 LTENDRKR 603
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLEGRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAYGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|421551302|ref|ZP_15997297.1| translation initiation factor IF-2 [Neisseria meningitidis 69166]
gi|433471979|ref|ZP_20429359.1| translation initiation factor IF-2 [Neisseria meningitidis 68094]
gi|433478149|ref|ZP_20435464.1| translation initiation factor IF-2 [Neisseria meningitidis 70012]
gi|433526661|ref|ZP_20483286.1| translation initiation factor IF-2 [Neisseria meningitidis 69096]
gi|433539441|ref|ZP_20495912.1| translation initiation factor IF-2 [Neisseria meningitidis 70030]
gi|402328063|gb|EJU63444.1| translation initiation factor IF-2 [Neisseria meningitidis 69166]
gi|432207020|gb|ELK63016.1| translation initiation factor IF-2 [Neisseria meningitidis 68094]
gi|432214076|gb|ELK69984.1| translation initiation factor IF-2 [Neisseria meningitidis 70012]
gi|432259293|gb|ELL14565.1| translation initiation factor IF-2 [Neisseria meningitidis 69096]
gi|432272198|gb|ELL27311.1| translation initiation factor IF-2 [Neisseria meningitidis 70030]
Length = 962
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 444/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGYNEIMEG-DQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDTANPERI 583
>gi|433522414|ref|ZP_20479099.1| translation initiation factor IF-2 [Neisseria meningitidis 61103]
gi|432258265|gb|ELL13553.1| translation initiation factor IF-2 [Neisseria meningitidis 61103]
Length = 962
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 445/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMIKGYNEIM-EGDQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDTANPERI 583
>gi|330444869|ref|ZP_08308524.1| GTP-binding protein TypA/BipA [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489179|dbj|GAA03021.1| GTP-binding protein TypA/BipA [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 608
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/608 (56%), Positives = 444/608 (73%), Gaps = 5/608 (0%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
+S++ I L AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI
Sbjct: 1 MSNQPIDKLRNIAIIAHVDHGKTTLVDKLLQQSGTLEGRGEAEERVMDSNDIEKERGITI 60
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+KN +I +N RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA
Sbjct: 61 LAKNTAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
G KPIVV+NKIDR ARPEWV+D FDLFD L AT+EQLDF V+Y SAL+G+A
Sbjct: 121 FAYGLKPIVVINKIDRPGARPEWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLEE 180
Query: 1094 KARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
NM PLF++I+ V + + PLQ+QI L+YSSY+G IG+ RI G +K+ Q
Sbjct: 181 GETGENMEPLFQSIVDNVAAPDVDVDGPLQMQISQLDYSSYVGVIGVARITRGSVKANQQ 240
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPN 1213
V I+ G D K+ + + GL+R V EA +GDI+ ITG+ E+ I TICD +
Sbjct: 241 VTIV-GADGSKRNGKVGTVLGYLGLERHEVEEAKAGDIIAITGLGELKISDTICDQNCVE 299
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
L L++DEPT+T+ F VNNSP AG+EGKF+T+R I RL E+ +N+ LRV + + D
Sbjct: 300 ALTPLSVDEPTVTMTFQVNNSPFAGKEGKFVTSRNILERLQKELVHNVALRVEETEDPDK 359
Query: 1274 IYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGI 1333
+ VSGRGELHL+ILIENMRREGYEL+VSRP VI K +G+L EP+E + +D+ E +QG
Sbjct: 360 -FRVSGRGELHLSILIENMRREGYELAVSRPEVIIKEEDGQLMEPFETVTIDVVEEHQGG 418
Query: 1334 IMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
IM+ + R G+L ++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P
Sbjct: 419 IMENIGLRKGELTDMAPDGKGRVRMDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGP 478
Query: 1394 FYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDN 1453
S +G+R NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG IIGIH+R N
Sbjct: 479 HKGGS---IGQRNNGVLISNATGKALTYALFNLQERGRLFAEHADEVYEGQIIGIHNRSN 535
Query: 1454 DLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRF 1513
DL VN +K KQLTN+R+SG+DEA L IK TLE A+EFI++DELVE+TP++IR+RK+
Sbjct: 536 DLTVNCLKGKQLTNVRASGTDEAQTLSPAIKYTLEQALEFIDNDELVEVTPESIRIRKKL 595
Query: 1514 LKENERKK 1521
L EN+RK+
Sbjct: 596 LTENDRKR 603
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLEGRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAYGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|359394394|ref|ZP_09187447.1| GTP-binding protein TypA/BipA [Halomonas boliviensis LC1]
gi|357971641|gb|EHJ94086.1| GTP-binding protein TypA/BipA [Halomonas boliviensis LC1]
Length = 616
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/601 (55%), Positives = 448/601 (74%), Gaps = 10/601 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL QSGT + RIMDS++ EKERGITI +KN +I++
Sbjct: 17 AIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERIMDSSDQEKERGITILAKNTAIQWQDS 76
Query: 983 --NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
N INI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA G KP
Sbjct: 77 QGNDYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKP 136
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
IVVVNKIDR ARP+WV+D FDLFD L A++EQLDFP+IY SAL+G A + + NM
Sbjct: 137 IVVVNKIDRPGARPDWVIDQIFDLFDNLGASDEQLDFPIIYCSALNGIAGMDPEELADNM 196
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
P+F+AI+ V + N P Q+QI +L+Y+SY+G IG+GRI G +K Q V I+ G
Sbjct: 197 DPMFQAIVDIVDPPQVELNGPFQMQISALDYNSYVGVIGLGRIKRGAVKPNQQVSII-GV 255
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
D K KI Q+ GL+RV NEA +GDIV +TGI+++ I T+CDP+K LP L++
Sbjct: 256 DGNVRKGKIGQVMTHMGLERVQTNEATAGDIVCVTGIDDLSISDTLCDPAKVEALPPLSV 315
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT+++ F VN+SP AG++GKF+T+R IK+RLD E+ +N+ LRV Q + + ++VSGR
Sbjct: 316 DEPTVSMTFQVNDSPFAGKDGKFVTSRNIKDRLDQELIHNVALRVEQGETPEK-FKVSGR 374
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY 1340
GELHL++LIE MRREG+EL+V RP VI K ++GE EPYE + +D EE +QG IM++L Y
Sbjct: 375 GELHLSVLIETMRREGFELAVGRPEVIIKEIDGEKQEPYEEVIIDCEEQHQGSIMEELGY 434
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R G++ N+ + K RVRL++ IP+RGLIGF+ +F+TLT GTG+++ F+ Y P +
Sbjct: 435 RKGEMTNMLPDGKGRVRLDFIIPARGLIGFRGQFLTLTSGTGILTSRFDHYGPLKPDASI 494
Query: 1401 DLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPI 1460
+ RRNGVL+S GKA+AY+L+ LQ+RG+L I+H VYEGM+IGI++R ND++VNP
Sbjct: 495 E---RRNGVLVSMVDGKALAYALYALQERGKLIIDHATEVYEGMLIGINNRANDMVVNPT 551
Query: 1461 KEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
K K+L N+RS+G+DE I L P+K +LE AIEF++ DELVE+TP +IRLRK+ LKE ERK
Sbjct: 552 KGKKLDNMRSTGNDENIVLTPPVKFSLEQAIEFLDSDELVEVTPAHIRLRKKLLKETERK 611
Query: 1521 K 1521
+
Sbjct: 612 R 612
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GIT-----QHIGAYN 110
V I+ HVDHGKT+L+D + + GIT I +
Sbjct: 16 VAIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERIMDSSDQEKERGITILAKNTAIQWQD 75
Query: 111 VVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
N I +DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 76 SQGNDYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLK 135
Query: 171 LIVAINKIDK 180
IV +NKID+
Sbjct: 136 PIVVVNKIDR 145
>gi|313667981|ref|YP_004048265.1| initiation factor IF2 [Neisseria lactamica 020-06]
gi|313005443|emb|CBN86878.1| initiation factor IF2 [Neisseria lactamica 020-06]
Length = 962
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 443/561 (78%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ + ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMGGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGFNEIMEG-DQLECFDI 955
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDTANPERI 583
>gi|421724501|ref|ZP_16163719.1| GTP-binding protein [Klebsiella oxytoca M5al]
gi|410374726|gb|EKP29389.1| GTP-binding protein [Klebsiella oxytoca M5al]
Length = 607
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/598 (55%), Positives = 449/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + + PLQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 TIVDRVPAPNVDLDGPLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDVAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETPDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRAGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ +K+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATTLVPALKMTLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|451972771|ref|ZP_21925974.1| GTP-binding protein TypA/BipA [Vibrio alginolyticus E0666]
gi|451931339|gb|EMD79030.1| GTP-binding protein TypA/BipA [Vibrio alginolyticus E0666]
Length = 609
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I++N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAIDWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A++EQLDF V+Y SAL+G+A+ NM PLFE
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGASDEQLDFKVVYASALNGWASLEEGETGENMEPLFE 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + + PLQ+QI L+YSSY+G IG+GR+ G +K Q V ++ G D K
Sbjct: 193 TIVGEVAAPEVDLDGPLQMQISQLDYSSYVGVIGVGRVTRGSVKPNQQVTVV-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNAVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K + +L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDSQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMAPDGKGRVRMDFIMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 INGVLIANAAGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAIDWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|334121884|ref|ZP_08495928.1| glutathione-disulfide reductase [Enterobacter hormaechei ATCC 49162]
gi|333392665|gb|EGK63766.1| glutathione-disulfide reductase [Enterobacter hormaechei ATCC 49162]
Length = 607
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/598 (55%), Positives = 449/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + LQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 TIVDRVPAPNVDLEGTLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|385850815|ref|YP_005897330.1| translation initiation factor IF-2 [Neisseria meningitidis
M04-240196]
gi|325205638|gb|ADZ01091.1| translation initiation factor IF-2 [Neisseria meningitidis
M04-240196]
Length = 962
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 445/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+T VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAINEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMLKGYNEIM-EGDQLECFDI 955
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDTANPERI 583
>gi|422110976|ref|ZP_16380801.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309378386|emb|CBX22987.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 962
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/561 (60%), Positives = 443/561 (78%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 576 DAANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ + ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMGGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGFNEIMEG-DQLECFDI 955
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKDAANPERI 583
>gi|259906713|ref|YP_002647069.1| Tyrosine phosphorylated protein A [Erwinia pyrifoliae Ep1/96]
gi|387869414|ref|YP_005800783.1| GTP-binding protein [Erwinia pyrifoliae DSM 12163]
gi|224962335|emb|CAX53790.1| Tyrosine phosphorylated protein A [Erwinia pyrifoliae Ep1/96]
gi|283476496|emb|CAY72311.1| GTP-binding protein [Erwinia pyrifoliae DSM 12163]
Length = 607
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFPVIY SAL+G A + +M PL+E
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPVIYASALNGIAGLDHSDMAEDMTPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVKHVSPPQVEMEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDATEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFEIAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRAGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSVRIRKRHLTENDRKR 599
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|218768665|ref|YP_002343177.1| translation initiation factor IF-2 [Neisseria meningitidis Z2491]
gi|32129611|sp|Q9JTB5.1|IF2_NEIMA RecName: Full=Translation initiation factor IF-2
gi|121052673|emb|CAM09014.1| initiation factor IF2 [Neisseria meningitidis Z2491]
Length = 962
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 444/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAINEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVDVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHARLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 936 LMIKGYNEIMEG-DQLECFDI 955
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|345874252|ref|ZP_08826066.1| translation initiation factor IF-2 [Neisseria weaveri LMG 5135]
gi|417957824|ref|ZP_12600743.1| translation initiation factor IF-2 [Neisseria weaveri ATCC 51223]
gi|343967888|gb|EGV36128.1| translation initiation factor IF-2 [Neisseria weaveri ATCC 51223]
gi|343970525|gb|EGV38698.1| translation initiation factor IF-2 [Neisseria weaveri LMG 5135]
Length = 930
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/539 (60%), Positives = 432/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +
Sbjct: 365 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLDDGAELA 424
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE + R P+VT+MGHVDHGKTSLLD+IR++ VV EAGGITQHIGAY+V T G +TF
Sbjct: 425 EVAE-VSRPPVVTVMGHVDHGKTSLLDFIRRSKVVQGEAGGITQHIGAYHVETPRGVVTF 483
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 484 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 543
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG F+++SAK G+ I+ LLE + L+AE+LELKAPV
Sbjct: 544 ESANPERIRQELTAHEVVPDEWGGDVQFVNVSAKQGLNIDALLEAVLLEAEVLELKAPVE 603
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTLR D+++AG ++G++R+M +ENG I EAGP
Sbjct: 604 APAKGIIVEARLDKGRGAVATLLVQSGTLRKGDMLLAGTAFGKVRAMTDENGNAIEEAGP 663
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 664 SIPVEILGLSDVPNAGEDAIVLTDEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 723
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 724 ENQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 783
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKLA+ +I IRY+NIIY+ I ++K+ ++ ++ E+KE ++G EIRQ
Sbjct: 784 IIGFNVRADASARKLAEGEDIEIRYYNIIYDAIDDVKAAMSGMLAPEEKEQVIGSVEIRQ 843
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +G+++RDS +R++RN +I TGEL SLKRFKD+VKEV+ G+EC
Sbjct: 844 VITVSKVGNIAGCMVTDGIVKRDSHVRLIRNNVVIHTGELASLKRFKDDVKEVRMGYEC 902
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D +R+S + + + + +E RG+ F
Sbjct: 437 VMGHVDHGKTSLLD-FIRRSKVVQGEAGGITQHIGAYHVETPRGVVTF------------ 483
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 484 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 540
Query: 1047 IDRSNARPEWV 1057
ID+ +A PE +
Sbjct: 541 IDKESANPERI 551
>gi|261342945|ref|ZP_05970803.1| hypothetical protein ENTCAN_09545 [Enterobacter cancerogenus ATCC
35316]
gi|288314694|gb|EFC53632.1| GTP-binding protein TypA/BipA [Enterobacter cancerogenus ATCC 35316]
Length = 607
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/598 (55%), Positives = 449/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + + LQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 TIVDRVPAPNVDLDGTLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDSDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETPDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPLSIRIRKRHLTENDRKRAM 601
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|91224958|ref|ZP_01260217.1| BipA protein [Vibrio alginolyticus 12G01]
gi|269964592|ref|ZP_06178831.1| GTP-binding protein typA/bipA [Vibrio alginolyticus 40B]
gi|91190204|gb|EAS76474.1| BipA protein [Vibrio alginolyticus 12G01]
gi|269830719|gb|EEZ84939.1| GTP-binding protein typA/bipA [Vibrio alginolyticus 40B]
Length = 609
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I++N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAIDWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A+ NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDDQLDFKVVYASALNGWASLEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V I+ G D K
Sbjct: 193 TIVDVVDAPNVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTII-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNAVEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLIANAMGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PIK+TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIKMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAIDWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|416075768|ref|ZP_11585155.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
gi|348005835|gb|EGY46305.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype b str.
SCC1398]
Length = 631
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/615 (56%), Positives = 456/615 (74%), Gaps = 8/615 (1%)
Query: 910 QNLFLSDE-NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIE 966
Q ++D+ +I L AIIAHVDHGKTTL+D LL+QSGT +++ +A R+MDSN++E
Sbjct: 11 QEFSMTDQIDINKLRNIAIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLE 70
Query: 967 KERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQT 1026
KERGITI +KN +I +N RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQT
Sbjct: 71 KERGITILAKNTAINWNSYRINIVDTPGHADFGGEVERVLSMVDSVLLMVDAFDGPMPQT 130
Query: 1027 RFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALH 1086
RFVT+KA G KPIVV+NK+DR ARP+WVVD FDLF L AT+EQLDFP+IYTSAL+
Sbjct: 131 RFVTQKAFSHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYTSALN 190
Query: 1087 GYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSG 1146
G A + + +M PLFEAI+++V K N P Q+QI L+Y+SY+G IGIGRI G
Sbjct: 191 GVAGLDHEDLAADMTPLFEAIVEHVEPPKVELNAPFQMQISQLDYNSYVGVIGIGRIKRG 250
Query: 1147 RIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTI 1206
+K Q V I++ K KI Q+ GL R + A +GDIV ITG+ E+ I TI
Sbjct: 251 TVKPNQSVTIIDSF-GKTRNGKIGQVLGHLGLQRYEEDIASAGDIVAITGLGELNISDTI 309
Query: 1207 CDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVT 1266
CD + LP L++DEPT+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV
Sbjct: 310 CDINNVEALPALSVDEPTVTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVE 369
Query: 1267 QNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDI 1326
+ + D + VSGRGELHL++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DI
Sbjct: 370 ETPNPDE-FRVSGRGELHLSVLIENMRREGYELAVSRPKVIFKQVDGHKQEPFEQVTIDI 428
Query: 1327 EEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISH 1386
EE +QG +M+ L R G++K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+
Sbjct: 429 EEQHQGAVMEALGIRKGEVKDMVPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYS 488
Query: 1387 VFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMII 1446
F Y + ++G+R+NGVLIS +GKA+AY+LW LQ+RG+L I+H VYEG II
Sbjct: 489 SFSHYD---DVKPGEIGQRKNGVLISNATGKALAYALWGLQERGKLMIDHGTEVYEGQII 545
Query: 1447 GIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKN 1506
GIHSR NDL VN ++ K+LTN+R+SG D+AI L +PIK +LE AIEFI+DDELVEITP++
Sbjct: 546 GIHSRSNDLTVNCLQGKKLTNMRASGKDDAIALTTPIKFSLEQAIEFIDDDELVEITPQS 605
Query: 1507 IRLRKRFLKENERKK 1521
IR+RK+ L E +RK+
Sbjct: 606 IRIRKKLLTETDRKR 620
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 110/260 (42%), Gaps = 53/260 (20%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF--SEAG----------------GITQHIGAYNVVT 113
+ I+ HVDHGKT+L+D + + + S +G GIT I A N
Sbjct: 27 IAIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGIT--ILAKNTAI 84
Query: 114 NHGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPL 171
N S I +DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 85 NWNSYRINIVDTPGHADFGGEVERVLSMVDSVLLMVDAFDGPMPQTRFVTQKAFSHGLKP 144
Query: 172 IVAINKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG--------- 218
IV INK+D + D +D++ ++ E+ P I SA GV
Sbjct: 145 IVVINKVDRPGARPDWVVDQVFDLFVNLGATDEQLD--FPIIYTSALNGVAGLDHEDLAA 202
Query: 219 -INKLLENISLQAEI--LELKAPVTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCSD 273
+ L E I E +EL AP S+LD G + I+ GT++ +
Sbjct: 203 DMTPLFEAIVEHVEPPKVELNAPFQMQI------SQLDYNSYVGVIGIGRIKRGTVKPNQ 256
Query: 274 IVVAGASYGRIRSMLNENGK 293
V S+G+ R NGK
Sbjct: 257 SVTIIDSFGKTR-----NGK 271
>gi|284008955|emb|CBA75834.1| GTP-binding protein [Arsenophonus nasoniae]
Length = 607
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + N++ R+MDSN++EKERGITI +KN +I+++
Sbjct: 10 AIIAHVDHGKTTLVDKLLQQSGTFGERNNLDERVMDSNDLEKERGITILAKNTAIKWHDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVVVN
Sbjct: 70 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAHGLKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL+E
Sbjct: 130 KIDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGIAGTDYNEMAADMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYV + + Q+QI L+Y++YLG IGIGRI G +K Q + I+N D K
Sbjct: 190 AIVKYVAPPQVDLAGAFQMQISQLDYNNYLGVIGIGRIKRGAVKPNQTIAIINS-DGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ A +GDI+ +TG+ E+ I T+CDP+ LP L +DEPT+
Sbjct: 249 SAKVGKVLTHLGLERIDSEIAQAGDIIALTGLGELNISDTLCDPNNIEALPALAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP GREGK++T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 309 SMYFCVNTSPFCGREGKYVTSRQILDRLKKELVHNVALRVEETEDPDA-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ G EP+E + +DIEE +QG +M L R G+L
Sbjct: 368 SVLIENMRREGFELAVSRPKVIFRQFEGRKQEPFEQVTLDIEERHQGDVMMALGERKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 428 RDMLPDGKGRVRLDYIIPSRGLIGFRTEFMTMTSGTGLLYATFSHYD---DVRPGEIGRR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+IS GK+VAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 485 QNGVMISNGQGKSVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L P+K TLE A+EFI+DDELVE+TP++IRLRKR+L EN+R++
Sbjct: 545 TNVRASGTDEATTLSPPVKKTLEQALEFIDDDELVEVTPQSIRLRKRYLTENDRRR 600
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLQQSGTFGERNNLDERVMDSNDLEKERGITILAKNTAIKWHD 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV +
Sbjct: 69 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAHGLKPIVVV 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|433520354|ref|ZP_20477069.1| translation initiation factor IF-2 [Neisseria meningitidis 65014]
gi|432252935|gb|ELL08283.1| translation initiation factor IF-2 [Neisseria meningitidis 65014]
Length = 962
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/561 (60%), Positives = 445/561 (79%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 397 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGAEA 455
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 456 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 515
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 516 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 575
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG FI +SAK G+ I+ LLE + L+AE+LEL APV
Sbjct: 576 EAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVD 635
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M++ENGK I EAGP
Sbjct: 636 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKAINEAGP 695
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 696 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 755
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LSTD+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 756 ETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAF 815
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 816 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGTVEIRQ 875
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS R++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 876 VISVSKVGNIAGCMVTDGVVKRDSHARLIRNNVVIHTGELSSLKRYKDDVKEVRMGFECG 935
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I + ++ FDI
Sbjct: 936 LMIKGYNEIM-EGDQLECFDI 955
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 469 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 515
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 516 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 572
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 573 IDKEAANPERI 583
>gi|410613504|ref|ZP_11324561.1| GTP-binding protein TypA/BipA [Glaciecola psychrophila 170]
gi|410166938|dbj|GAC38450.1| GTP-binding protein TypA/BipA [Glaciecola psychrophila 170]
Length = 612
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/607 (55%), Positives = 446/607 (73%), Gaps = 5/607 (0%)
Query: 915 SDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIF 974
S+ +I L AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI
Sbjct: 4 SNTSIEYLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGVAEERVMDSNDIEKERGITIL 63
Query: 975 SKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKAL 1034
+KN +I++N RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA
Sbjct: 64 AKNTAIKWNEYRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAF 123
Query: 1035 KLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSK 1094
G KPIVV+NKID+ ARP WV+D FDLFD L AT++QLDF V+Y SA++G+A +
Sbjct: 124 AQGLKPIVVINKIDKPGARPSWVIDQVFDLFDNLGATDDQLDFQVVYASAINGWATNDLD 183
Query: 1095 ARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDV 1154
NM PLFE I+K+V + N PLQ+Q+ L+Y+SY+G IGIGRI G ++ Q V
Sbjct: 184 VPSDNMTPLFETIIKHVKPPVADINGPLQMQMSQLDYNSYVGVIGIGRITRGSVRPNQQV 243
Query: 1155 VIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNG 1214
++ G D K +I Q++ + GL R+ V+ +GDIV ITG+ E+ I T+CDPS
Sbjct: 244 SVI-GVDGKTRNGRIGQVQGYLGLQRLEVDSGDAGDIVAITGLGELKISDTVCDPSAVVA 302
Query: 1215 LPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSI 1274
LP L++DEPT+T+ F VNNSP G+EGK++T+R I RL E+ +N+ L+V + + D
Sbjct: 303 LPPLSVDEPTVTMTFQVNNSPFCGKEGKYVTSRNIHERLQTELIHNVALKVEETQDPDK- 361
Query: 1275 YEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGII 1334
+ VSGRGELHL ILIENMRREGYEL+VSRP VI K ++G +EP+E + +D+EE +QG I
Sbjct: 362 FRVSGRGELHLGILIENMRREGYELAVSRPEVILKQVDGVTHEPFETVTIDVEEKHQGSI 421
Query: 1335 MQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPF 1394
M+++ R G+L N+ + K RVR+++ IPSRGLIGFQ +F+T+T G+GLI H F+ Y P
Sbjct: 422 MEQIGLRKGELTNMTPDGKGRVRMDFMIPSRGLIGFQTDFMTMTSGSGLIYHTFDHYGPH 481
Query: 1395 YNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDND 1454
+GKR++GVLI+ +GKA+ +L+ LQ RGRLFI H VYEGM+IGIH+R+ND
Sbjct: 482 KGGV---IGKRKSGVLIANATGKALTNALFNLQSRGRLFIGHGVEVYEGMVIGIHAREND 538
Query: 1455 LLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFL 1514
L VN +K KQLTN+R+SG+DEA L+ PI ++LE A+EFI++DELVE+TP + R+RK+ L
Sbjct: 539 LTVNALKGKQLTNVRASGTDEAQSLVPPIIMSLEQALEFIDNDELVEVTPLSTRIRKKLL 598
Query: 1515 KENERKK 1521
EN RK+
Sbjct: 599 TENLRKQ 605
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLESRGVAEERVMDSNDIEKERGITILAKNTAIKWNE 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 133
Query: 176 NKIDK 180
NKIDK
Sbjct: 134 NKIDK 138
>gi|419959564|ref|ZP_14475616.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae GS1]
gi|388605462|gb|EIM34680.1| GTP-binding protein [Enterobacter cloacae subsp. cloacae GS1]
Length = 607
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/598 (55%), Positives = 449/598 (75%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + LQ+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 TIVDRVPAPNVDLEGTLQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESDIAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+EN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRKQEPFENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ PIK+TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATVLVPPIKMTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKRAM 601
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|399908527|ref|ZP_10777079.1| GTP-binding protein TypA [Halomonas sp. KM-1]
Length = 615
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/616 (54%), Positives = 452/616 (73%), Gaps = 10/616 (1%)
Query: 911 NLFLSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERG 970
N ++ I L AIIAHVDHGKTTL+D LL QSGT + RIMDSN+ EKERG
Sbjct: 2 NTAVTPSRIESLRNIAIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERIMDSNDQEKERG 61
Query: 971 ITIFSKNCSIEY---NGT--RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQ 1025
ITI +KN +I + NG INI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQ
Sbjct: 62 ITILAKNTAIRWQDGNGRDFHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQ 121
Query: 1026 TRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSAL 1085
TRFVT+KA G KPIVVVNKIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL
Sbjct: 122 TRFVTQKAFAQGLKPIVVVNKIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYCSAL 181
Query: 1086 HGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILS 1145
+G A + + +M P+F+AI+ V + P Q+QI +L+YSSY+G IG+GRI
Sbjct: 182 NGIAGMDPDSLAEDMSPMFQAIVDIVEPPAVELDGPFQMQISALDYSSYVGVIGLGRIKR 241
Query: 1146 GRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGST 1205
G +K Q +V+++ D K K+ Q+ GL+RV A +GDIV ITGI+E+ I T
Sbjct: 242 GSVKPNQQIVVVD-TDGNTRKGKVGQVMTHLGLERVQTELATAGDIVCITGIDELSISDT 300
Query: 1206 ICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRV 1265
+CDP+ LP L++DEPT+++ F VN+SP AGR+GK++T+R IK+RL+ E+ +N+ LRV
Sbjct: 301 LCDPAAVEALPPLSVDEPTVSMTFQVNDSPFAGRDGKYVTSRNIKDRLEQELIHNVALRV 360
Query: 1266 TQNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVD 1325
Q + + ++VSGRGELHL++LIE MRREG+EL+V RP VI K ++G EPYE + +D
Sbjct: 361 EQGESPEK-FKVSGRGELHLSVLIETMRREGFELAVGRPEVILKEIDGVKQEPYEEVIID 419
Query: 1326 IEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLIS 1385
EE +QG IM++L YR G+L N+ + K RVRL++ IP+RGLIGF+ +F+TLT GTG+++
Sbjct: 420 CEEQHQGSIMEELGYRKGELTNMNPDGKGRVRLDFIIPARGLIGFRGQFLTLTSGTGILT 479
Query: 1386 HVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMI 1445
F+ Y P + + RRNGVL+S GKA+AY+L+ LQ+RG+L I+H VYEGM+
Sbjct: 480 SRFDHYGPLKPDAAIE---RRNGVLVSMVDGKALAYALYALQERGKLIIDHGTEVYEGML 536
Query: 1446 IGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPK 1505
+GIH+R NDL+VNP K K+L N+R+SG+DE I L P+K +LE AIEF++DDELVEITP
Sbjct: 537 VGIHNRANDLVVNPTKGKKLDNMRASGNDENIVLTPPVKFSLEQAIEFLDDDELVEITPN 596
Query: 1506 NIRLRKRFLKENERKK 1521
+IRLRK+FLKE+ERK+
Sbjct: 597 HIRLRKKFLKEHERKR 612
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + I N IT L
Sbjct: 16 IAIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERIMDSNDQEKERGITILAKNTAIRWQD 75
Query: 122 -----------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 76 GNGRDFHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLK 135
Query: 171 LIVAINKIDK 180
IV +NKID+
Sbjct: 136 PIVVVNKIDR 145
>gi|269140833|ref|YP_003297534.1| GTP-binding protein [Edwardsiella tarda EIB202]
gi|387869280|ref|YP_005700749.1| GTP-binding protein TypA/BipA [Edwardsiella tarda FL6-60]
gi|267986494|gb|ACY86323.1| GTP-binding protein [Edwardsiella tarda EIB202]
gi|304560593|gb|ADM43257.1| GTP-binding protein TypA/BipA [Edwardsiella tarda FL6-60]
Length = 606
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + + R+MDSN++EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGERNDATERVMDSNDLEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL G A + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALQGIAGLDHADMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + ++P Q+QI L+Y+SY+G IGIGRI G++K Q + I++ + N
Sbjct: 189 AIVEHVAAPDVDLDSPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQITIIDSEGKRRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ GL R+ + A +GDIV +TG+ ++ I T+CDPS LP L +DEPT+
Sbjct: 249 -GKMGQVLGHLGLQRIETDLAEAGDIVAVTGLGDLNISDTLCDPSAVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI RL E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMYFCVNTSPFCGKEGKFVTSRQILERLQKELVHNVALRVEETPDPDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL+VSRP+VI++ ++G + EP+E + +DIEE +QG +M+ L R G++
Sbjct: 367 SVLIENMRREGYELAVSRPKVIYREIDGRMQEPFEQVTLDIEEQHQGSVMEALGIRKGEI 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ +F+T+T GTGL+ F Y + ++G+R
Sbjct: 427 RDMSPDGKGRVRLDYIIPSRGLIGFRTDFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L P+K+TLE A+EFI+DDELVE+TP ++RLRKR L EN+R++
Sbjct: 544 TNMRASGTDEATTLSPPVKMTLEQALEFIDDDELVEVTPHSVRLRKRHLTENDRRR 599
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGERNDATERVMDSNDLEKERGITILAKNTAINWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|238921701|ref|YP_002935216.1| GTP-binding protein TypA/BipA, putative [Edwardsiella ictaluri
93-146]
gi|238871270|gb|ACR70981.1| GTP-binding protein TypA/BipA, putative [Edwardsiella ictaluri
93-146]
Length = 606
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + + R+MDSN++EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGERNDATERVMDSNDLEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL G A + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALQGIAGLDHADMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + ++P Q+QI L+Y+SY+G IGIGRI G++K Q + I++ + N
Sbjct: 189 AIVEHVAAPDVDLDSPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQITIIDSEGKRRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ GL R+ + A +GDIV +TG+ ++ I T+CDPS LP L +DEPT+
Sbjct: 249 -GKVGQVLGHLGLQRIETDLAEAGDIVAVTGLGDLNISDTLCDPSAVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI RL E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMYFCVNTSPFCGKEGKFVTSRQILERLQKELVHNVALRVEETPDPDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL+VSRP+VI++ ++G + EP+E + +DIEE +QG +M+ L R G++
Sbjct: 367 SVLIENMRREGYELAVSRPKVIYREIDGRMQEPFEQVTLDIEEQHQGSVMEALGIRKGEI 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ +F+T+T GTGL+ F Y + ++G+R
Sbjct: 427 RDMSPDGKGRVRLDYIIPSRGLIGFRTDFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L P+K+TLE A+EFI+DDELVE+TP ++RLRKR L EN+R++
Sbjct: 544 TNMRASGTDEATTLSPPVKMTLEQALEFIDDDELVEVTPHSVRLRKRHLTENDRRR 599
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGERNDATERVMDSNDLEKERGITILAKNTAINWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|329895801|ref|ZP_08271177.1| GTP-binding protein TypA/BipA [gamma proteobacterium IMCC3088]
gi|328922163|gb|EGG29520.1| GTP-binding protein TypA/BipA [gamma proteobacterium IMCC3088]
Length = 604
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + + R+MDSN+ E+ERGITI +KN +I ++
Sbjct: 9 AIIAHVDHGKTTLVDCLLQQSGTLDRRSDGAERVMDSNDQERERGITILAKNTAIRWSDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA + G PIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLNPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD+L A E QLDFP++YTSA+ G A + +M PLF
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDRLGANETQLDFPIVYTSAIQGIAGLDPNEMADDMTPLFN 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K VP + ++ +PLQ+QI +L+YSSY+G IG+GRI G++K V +++ +K N
Sbjct: 189 EIIKRVPEPEVDATSPLQMQISALDYSSYVGVIGVGRITRGKLKPNTPVAVVDREGNKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AKI Q+ F GL+RV V++A +GDIV ITGI+ + I T+CD + LP L++DEPT+
Sbjct: 249 -AKILQVMGFHGLERVEVDQAEAGDIVCITGIDGLNISDTLCDQAHIEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG++GK++T+R IK RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKDGKYVTSRNIKERLERELIHNVALRVVQGDSPDK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE+MRREG+EL VSRP VI K ++G + EPYE L +D E+ +QG IM++L R +L
Sbjct: 367 SVLIESMRREGFELGVSRPEVIRKEIDGVMQEPYEQLVIDCEDQHQGAIMEELGNRRAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + RVRLE+ +P+RGLIGF++ F+TLT G G+++H+F+ YAP + ++ +R
Sbjct: 427 ENMVPDGNGRVRLEFMVPARGLIGFRSLFLTLTSGGGIMTHIFDHYAPVKHT---EIARR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GK +AYSL+ LQDRGRLFI+ N VYEG IIG+HSR NDL VNP K KQL
Sbjct: 484 VNGVLISMVKGKTLAYSLFTLQDRGRLFIDPNIEVYEGQIIGLHSRSNDLTVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++G+DE + L PI+ TLE A+EFI DDELVE+TP IRLRK+ L E+ERK+
Sbjct: 544 TNIRAAGTDENLLLTPPIRHTLEQALEFIEDDELVEVTPSAIRLRKKLLVEHERKR 599
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDCLLQQSGTLDRRSDGAERVMDSNDQERERGITILAKNTAIRWSD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFERGLNPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|28896896|ref|NP_796501.1| BipA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153838828|ref|ZP_01991495.1| GTP-binding protein TypA/BipA [Vibrio parahaemolyticus AQ3810]
gi|260365917|ref|ZP_05778411.1| GTP-binding protein TypA [Vibrio parahaemolyticus K5030]
gi|260877796|ref|ZP_05890151.1| GTP-binding protein TypA [Vibrio parahaemolyticus AN-5034]
gi|260895555|ref|ZP_05904051.1| GTP-binding protein TypA [Vibrio parahaemolyticus Peru-466]
gi|260902579|ref|ZP_05910974.1| GTP-binding protein TypA [Vibrio parahaemolyticus AQ4037]
gi|417320991|ref|ZP_12107531.1| BipA protein [Vibrio parahaemolyticus 10329]
gi|433656433|ref|YP_007273812.1| GTP-binding protein TypA [Vibrio parahaemolyticus BB22OP]
gi|7341379|gb|AAF61274.1|AF247673_1 BipA [Vibrio parahaemolyticus]
gi|28805104|dbj|BAC58385.1| BipA protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149747758|gb|EDM58654.1| GTP-binding protein TypA/BipA [Vibrio parahaemolyticus AQ3810]
gi|308088517|gb|EFO38212.1| GTP-binding protein TypA [Vibrio parahaemolyticus Peru-466]
gi|308089821|gb|EFO39516.1| GTP-binding protein TypA [Vibrio parahaemolyticus AN-5034]
gi|308109723|gb|EFO47263.1| GTP-binding protein TypA [Vibrio parahaemolyticus AQ4037]
gi|308113412|gb|EFO50952.1| GTP-binding protein TypA [Vibrio parahaemolyticus K5030]
gi|328471671|gb|EGF42548.1| BipA protein [Vibrio parahaemolyticus 10329]
gi|432507121|gb|AGB08638.1| GTP-binding protein TypA [Vibrio parahaemolyticus BB22OP]
Length = 609
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A+ NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDDQLDFKVVYASALNGWASLEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + PLQ+Q+ L+YSSY+G IG+ R+ G +K+ Q V I+ G D K
Sbjct: 193 TIVDVVDAPNVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKANQQVTII-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNAVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMAPDGKGRVRMDFIMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLIANAAGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIVMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|298369367|ref|ZP_06980685.1| translation initiation factor IF-2 [Neisseria sp. oral taxon 014
str. F0314]
gi|298283370|gb|EFI24857.1| translation initiation factor IF-2 [Neisseria sp. oral taxon 014
str. F0314]
Length = 945
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/539 (60%), Positives = 430/539 (79%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL +E +
Sbjct: 380 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFL-DEGVEA 438
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 439 VEAEALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVETPRGVITF 498
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 499 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDK 558
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L + +V+P+E+GG F+ +SAK G+ I+ LLE + L+AE+LEL AP
Sbjct: 559 EAANPERIRQELTAHEVVPDEWGGNVQFVDVSAKKGLNIDALLEAVLLEAEVLELTAPAD 618
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G+IR+M +ENGK I EAGP
Sbjct: 619 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMTDENGKAINEAGP 678
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 679 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 738
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LS ++V + V+H+ VG I ESD+NLAIAS A
Sbjct: 739 ENQAQSLSVIIKADVQGSYEALAGSLKKLSNEEVVVNVLHSGVGGITESDVNLAIASGAF 798
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 799 IIGFNVRADASARKLAENEDVEIRYYNIIYDAIDDVKAAMSGMLAPEQKEQVTGTVEIRQ 858
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKRFKD+VKEV+ GFEC
Sbjct: 859 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRFKDDVKEVRMGFEC 917
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 452 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVETPRGVITF------------ 498
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 499 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNK 555
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 556 IDKEAANPERI 566
>gi|292486529|ref|YP_003529395.1| GTP-binding protein [Erwinia amylovora CFBP1430]
gi|292897766|ref|YP_003537135.1| tyrosine phosphorylated protein A [Erwinia amylovora ATCC 49946]
gi|428783449|ref|ZP_19000945.1| GTP-binding protein [Erwinia amylovora ACW56400]
gi|291197614|emb|CBJ44708.1| GTP-binding protein (tyrosine phosphorylated protein A) [Erwinia
amylovora ATCC 49946]
gi|291551942|emb|CBA18979.1| GTP-binding protein [Erwinia amylovora CFBP1430]
gi|312170597|emb|CBX78860.1| GTP-binding protein [Erwinia amylovora ATCC BAA-2158]
gi|426277940|gb|EKV55662.1| GTP-binding protein [Erwinia amylovora ACW56400]
Length = 607
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFPVIY SAL+G A + +M PL+E
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPVIYASALNGIAGLDHSDMAEDMTPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVKHVSPPQVEMEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDATEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFEIAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRAGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSVRIRKRHLTENDRKR 599
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|88797258|ref|ZP_01112848.1| predicted membrane GTPase involved in stress response [Reinekea
blandensis MED297]
gi|88780127|gb|EAR11312.1| predicted membrane GTPase involved in stress response [Reinekea sp.
MED297]
Length = 605
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/597 (55%), Positives = 447/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTF-RKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT RK+Q+ RIMDSN+ EKERGITI +KN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGRKDQDAE-RIMDSNDQEKERGITILAKNTAIKWQD 67
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G KPIVV+
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFARGLKPIVVI 127
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NKIDR ARP+WV+D FDLFD+L AT+EQLDFPVIY SAL+G A + +M PLF
Sbjct: 128 NKIDRPGARPDWVMDQVFDLFDRLGATDEQLDFPVIYASALNGIAGLDPDNMADDMNPLF 187
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
E I + VP + + P Q+QI +L+Y+SY+G IG+GRI G +K + I++ +
Sbjct: 188 EMITEVVPAPDVDVDGPFQMQISALDYNSYVGVIGVGRITRGSVKPNDQISIISADESVR 247
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q+ + GL+RV V+ A +GDIV ITGI+++ I T+C+P L L++DEPT
Sbjct: 248 KNKKVLQVMGYHGLERVEVSSASAGDIVCITGIDQLKISDTLCNPQAVEALTPLSVDEPT 307
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VN+SP AG+EGKFIT+R IK RL+ E+ +N+ LRV D + VSGRGELH
Sbjct: 308 VSMTFQVNDSPFAGKEGKFITSRNIKERLEQELIHNVALRVEPGDSPDK-FRVSGRGELH 366
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIE MRREG+EL VSRP VI + ++G+++EP+E + +D+E+ +QG +M++L R +
Sbjct: 367 LSVLIETMRREGFELGVSRPEVIQREVDGQIHEPFEQVVIDVEDQHQGAVMEELGLRKAE 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+ N+E + K RV+LE+ PSRGLIGF+ F+TLT G+G+++ +F+ Y P + D+
Sbjct: 427 MTNMEPDGKGRVKLEFLAPSRGLIGFRGLFLTLTSGSGIMTSIFDHYGPV---KQGDVVS 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S GK ++Y+L+ LQDRGRLF+ H + +YEG IIG+HSR NDL VNP K KQ
Sbjct: 484 RQNGVLVSMVKGKTLSYALYTLQDRGRLFLGHGEDIYEGQIIGLHSRANDLAVNPTKGKQ 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R++G+DEA+ L P++ TLE A+EFI DDELVE+TP++IRLRK+ L ENERK+
Sbjct: 544 LTNVRAAGTDEALTLTPPVRHTLEQALEFIEDDELVEVTPESIRLRKKLLTENERKR 600
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGRKDQDAERIMDSNDQEKERGITILAKNTAIKWQD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFARGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|312882848|ref|ZP_07742580.1| GTPase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369367|gb|EFP96887.1| GTPase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 609
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ + +M PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWASLDEGETGEDMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVEEVAAPQVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC ++ LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNQVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H ++ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHTYDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 INGVLIANAAGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPILMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|410665374|ref|YP_006917745.1| GTP-binding protein TypA [Simiduia agarivorans SA1 = DSM 21679]
gi|409027731|gb|AFV00016.1| GTP-binding protein TypA [Simiduia agarivorans SA1 = DSM 21679]
Length = 602
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + RIMDSN+ E+ERGITI +KN +IE+NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLDRKNVGTERIMDSNDQERERGITILAKNTAIEWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSMVD V LL+DAV+GPMPQTRFVT KA + G PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVLSMVDCVCLLVDAVDGPMPQTRFVTSKAFEKGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD+L T+EQLDFPV+Y SAL+G A + +M PLF+
Sbjct: 129 KVDRPGARPDWVMDQVFDLFDRLGGTDEQLDFPVVYASALNGIAGLDLDDMAEDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + P Q+QI +L+Y+SY+G IG+GRI G +K Q VVI++ + K
Sbjct: 189 MIVDKVQPPAVDRDGPFQMQISALDYNSYVGVIGVGRIKRGSVKPNQQVVIVDD-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K KI Q+ + GL+RV EA +GDIV +TGIE + I T+CDP LP L +DEPT+
Sbjct: 248 KGKILQVMGYLGLERVEETEAFAGDIVCVTGIEGLNISDTLCDPQNVEALPPLMVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RLD E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLDQELIHNVALRVQQGDSPDK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL VSRP VI K ++G + EP+E + +D+EE +QG IM++L R ++
Sbjct: 367 SVLIENMRREGFELGVSRPEVIQKEIDGVIQEPFEQVVIDVEEQHQGSIMEELGLRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + + RV+LE+ +PSRGLIGF+ +F+TLT G+G+++ +F+ Y P + ++ KR
Sbjct: 427 TNMEPDGQGRVKLEFIVPSRGLIGFRGQFLTLTSGSGIMTSIFDHYGPV---KQGEVAKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S GK +AY L LQDRGRLF+ + +YEG I+G+HSR NDL+VNP K KQL
Sbjct: 484 INGVLVSMVKGKTLAYGLHPLQDRGRLFLGAGEEIYEGQIVGLHSRGNDLVVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A+ L P++ TLE A+EFI DDELVE+TP++IRLRK+ L ENERK+
Sbjct: 544 TNVRASGTDDALTLSPPVRHTLEQALEFIEDDELVEVTPQSIRLRKKLLTENERKR 599
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + T+ I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLDRKNVGTERIMDSNDQERERGITILAKNTAIEWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V L+V A DG MPQTR + A G+ IV I
Sbjct: 68 YHINIVDTPGHADFGGEVERVLSMVDCVCLLVDAVDGPMPQTRFVTSKAFEKGLNPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|374334359|ref|YP_005091046.1| BipA protein [Oceanimonas sp. GK1]
gi|372984046|gb|AEY00296.1| BipA protein [Oceanimonas sp. GK1]
Length = 611
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/601 (55%), Positives = 440/601 (73%), Gaps = 10/601 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN+IE+ERGITI +KN +I +
Sbjct: 12 AIIAHVDHGKTTLVDKLLQQSGTLESRGDAEERVMDSNDIERERGITILAKNTAIRWTSP 71
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA EGPMPQTRFVT+KA G KP
Sbjct: 72 EGQEYRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQEGPMPQTRFVTQKAFAQGLKP 131
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
IV++NK+D+ ARP+WV+D FDLFD L AT++QLDF V+Y S L+G+A+ ++ +M
Sbjct: 132 IVIINKVDKPGARPDWVMDQVFDLFDNLGATDDQLDFQVVYASGLNGWASLDADEPAEDM 191
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
LF+ I+ VPV + LQ+QI L+YSSY+G IG+GRI G ++ Q V ++ G
Sbjct: 192 TALFQTIVDQVPVPDADPEGSLQMQISQLDYSSYVGVIGVGRIKRGTVRVNQQVTVI-GA 250
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
D K K+ Q+ + GL R V EA +GDIV ITG+ E+ I T+C LP L++
Sbjct: 251 DGKTRNGKVGQVMGYLGLQRHDVTEASAGDIVAITGLGELKISDTVCAAGAVEALPPLSV 310
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT+T+ F VN SP AG++GKF+T+R I RL E+ +N+ LRV + D + VSGR
Sbjct: 311 DEPTVTMTFQVNTSPFAGQDGKFVTSRNILERLKQELVHNVALRVEETGDPDK-FRVSGR 369
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY 1340
GELHL ILIENMRREG+EL+VSRP VI + NGEL EP+E L VD+EE +QG +M+KL
Sbjct: 370 GELHLGILIENMRREGFELAVSRPEVILREENGELQEPFETLTVDVEESSQGSVMEKLGE 429
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R ++ N+ + K RVR+++ +P+RGLIGFQ EF+TLT G+GL+ H F+ Y P
Sbjct: 430 RKAEMTNMVPDGKGRVRIDFMVPARGLIGFQTEFMTLTSGSGLMYHTFDHYGPHKGG--- 486
Query: 1401 DLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPI 1460
++G+R NGVLIS +GKA+AY+L+ LQ+RGRLFI H VYEGM+IGIH+R NDL VN +
Sbjct: 487 NIGQRNNGVLISNATGKALAYALFNLQERGRLFIEHATEVYEGMVIGIHNRSNDLTVNCL 546
Query: 1461 KEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
K KQLTNIR++G+DEA+ L+ PIK++LE A+EFI+DDELVE+TP +IR+RK+ L EN+RK
Sbjct: 547 KGKQLTNIRAAGTDEALTLVPPIKMSLERALEFIDDDELVEVTPNHIRVRKKLLTENDRK 606
Query: 1521 K 1521
+
Sbjct: 607 R 607
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDKLLQQSGTLESRGDAEERVMDSNDIERERGITILAKNTAIRWTS 70
Query: 122 -----------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
DTPGH F R + D V+L+V A +G MPQTR A G+
Sbjct: 71 PEGQEYRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQEGPMPQTRFVTQKAFAQGLK 130
Query: 171 LIVAINKIDK 180
IV INK+DK
Sbjct: 131 PIVIINKVDK 140
>gi|365967945|ref|YP_004949507.1| TypA protein [Aggregatibacter actinomycetemcomitans ANH9381]
gi|365746858|gb|AEW77763.1| TypA protein [Aggregatibacter actinomycetemcomitans ANH9381]
Length = 617
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/598 (57%), Positives = 448/598 (74%), Gaps = 7/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYN 983
AIIAHVDHGKTTL+D LL+QSGT +++ +A R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGITILAKNTAINWN 73
Query: 984 GTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV 1043
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV
Sbjct: 74 SYRINIVDTPGHADFGGEVERVLSMVDSVLLMVDAFDGPMPQTRFVTQKAFSHGLKPIVV 133
Query: 1044 VNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPL 1103
+NK+DR ARP+WVVD FDLF L AT+EQLDFP+IYTSAL+G A + + +M PL
Sbjct: 134 INKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYTSALNGVAGLDHEDLAADMTPL 193
Query: 1104 FEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK 1163
FEAI+++V K N P Q+QI L+Y+SY+G IGIGRI G +K Q V I++ K
Sbjct: 194 FEAIVEHVEPPKVELNAPFQMQISQLDYNSYVGVIGIGRIKRGTVKPNQSVTIIDSF-GK 252
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
KI Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L++DEP
Sbjct: 253 TRNGKIGQVLGHLGLQRYEEDIASAGDIVAITGLGELNISDTICDINNVEALPALSVDEP 312
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
T+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGEL
Sbjct: 313 TVTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGEL 371
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGG 1343
HL++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G
Sbjct: 372 HLSVLIENMRREGYELAVSRPKVIFKQVDGHKQEPFEQVTIDIEEQHQGAVMEALGIRKG 431
Query: 1344 DLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLG 1403
++K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G
Sbjct: 432 EVKDMVPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIG 488
Query: 1404 KRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEK 1463
+R+NGVLIS +GKA+AY+LW LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K
Sbjct: 489 QRKNGVLISNATGKALAYALWGLQERGKLMIDHGTEVYEGQIIGIHSRSNDLTVNCLQGK 548
Query: 1464 QLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+LTN+R+SG D+AI L +PIK +LE AIEFI+DDELVEITP++IR+RK+ L E +RK+
Sbjct: 549 KLTNMRASGKDDAIALTTPIKFSLEQAIEFIDDDELVEITPQSIRIRKKLLTETDRKR 606
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 22/129 (17%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF--SEAG----------------GITQHIGAYNVVT 113
+ I+ HVDHGKT+L+D + + + S +G GIT I A N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGIT--ILAKNTAI 70
Query: 114 NHGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPL 171
N S I +DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 71 NWNSYRINIVDTPGHADFGGEVERVLSMVDSVLLMVDAFDGPMPQTRFVTQKAFSHGLKP 130
Query: 172 IVAINKIDK 180
IV INK+D+
Sbjct: 131 IVVINKVDR 139
>gi|256823493|ref|YP_003147456.1| GTP-binding protein TypA [Kangiella koreensis DSM 16069]
gi|256797032|gb|ACV27688.1| GTP-binding protein TypA [Kangiella koreensis DSM 16069]
Length = 607
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 441/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLEQSGTLGDRAGPQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA EGPMPQTRFVT+KA G KPI+V+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAAEGPMPQTRFVTQKAFAQGLKPILVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A+ +++ +M PLFE
Sbjct: 129 KIDKPSARPDWVMDQVFDLFDNLGATDDQLDFEVVYASALNGWASRDAETTGTDMQPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V N+ Q+QI L+Y+SY+G IG+GR+ G +K Q V I++ K N
Sbjct: 189 AIVDNVAPPPANAEGGFQMQISQLDYNSYVGVIGVGRVSRGSVKQNQQVTIVSADGTKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V+ A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 249 -GKVGQVLGYLGLDRHEVDSADAGDIIAITGLGELKISDTICDQNAVEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDDPDK-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREG+E++VSRP VI KT++G+L EP+E + +D+EE +QG +M+++ R +L
Sbjct: 367 GILIENMRREGFEIAVSRPEVILKTIDGKLQEPFETVTIDVEEQHQGSVMERMGTRKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y D+G+R
Sbjct: 427 TNMSPDGKGRVRLDFMMPSRGLIGFQTEFMTLTSGSGLMYHSFDHYGLHKGG---DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+GVLI+ +GKA+ +L+ LQ+RGRLF H D VYEG I+GIHSR NDL VN +K KQL
Sbjct: 484 ASGVLIANMTGKALTNALFNLQERGRLFAKHGDEVYEGQIVGIHSRSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L P+K+TLE A+EFINDDELVE+TP +IRLRK+ L E +RK+
Sbjct: 544 TNVRASGTDEAQVLTPPVKLTLEQALEFINDDELVEVTPNSIRLRKKHLSETDRKR 599
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLEQSGTLGDRAGPQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ I+ I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAAEGPMPQTRFVTQKAFAQGLKPILVI 127
Query: 176 NKIDKLDINLDRI 188
NKIDK D +
Sbjct: 128 NKIDKPSARPDWV 140
>gi|427811652|ref|ZP_18978717.1| gtp-binding protein typa/bipa, partial [Escherichia coli]
gi|304976|gb|AAB03005.1| matches PS00017: ATP_GTP_A and PS00301: EFACTOR_GTP; similar to
elongation factor G, TetM/TetO tetracycline-resistance
proteins [Escherichia coli str. K-12 substr. MG1655]
gi|412971831|emb|CCJ46497.1| gtp-binding protein typa/bipa, partial [Escherichia coli]
Length = 591
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/587 (56%), Positives = 445/587 (75%), Gaps = 5/587 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKR 1512
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKR 590
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|377578496|ref|ZP_09807473.1| GTP-binding protein TypA [Escherichia hermannii NBRC 105704]
gi|377540082|dbj|GAB52638.1| GTP-binding protein TypA [Escherichia hermannii NBRC 105704]
Length = 607
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/596 (55%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFSERTETTERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGNDHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y++Y+G IGIGRI G++K Q + +++ + K
Sbjct: 189 AIIDHVPAPNVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITLIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I T+CDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIESTEAEAGDIIAITGLGELNISDTLCDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKFVTSRQILERLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRMIDGRMQEPFENVTLDIEEQHQGAVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 NNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PIK++LE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEATVLVPPIKMSLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + FSE T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFSERTETTERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|307543710|ref|YP_003896189.1| GTP-binding protein [Halomonas elongata DSM 2581]
gi|307215734|emb|CBV41004.1| K06207 GTP-binding protein [Halomonas elongata DSM 2581]
Length = 619
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/605 (55%), Positives = 442/605 (73%), Gaps = 10/605 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + RIMDSN+ EKERGITI +KN +I + G
Sbjct: 20 AIIAHVDHGKTTLVDKLLQQSGTLDRKAEGQERIMDSNDQEKERGITILAKNTAIRWQGP 79
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
INI+DTPGHADFGGEVER++SMVD+VLL++DAV+GPMPQTRFVT+KA G KP
Sbjct: 80 DERDYHINIVDTPGHADFGGEVERVMSMVDSVLLMVDAVDGPMPQTRFVTQKAFDQGLKP 139
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
IVVVNKIDR ARP+WV+D FDLFD L A++EQLDFP+IY SAL+G A +M
Sbjct: 140 IVVVNKIDRPGARPDWVIDQIFDLFDNLGASDEQLDFPIIYCSALNGVAGPEPDQLTDDM 199
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
P+F+AI+ V K P Q+QI +L+Y+SY+G IG+GRI G +K Q V I+
Sbjct: 200 TPMFKAIVDIVEPPKVELEAPFQMQISALDYNSYVGVIGLGRITRGSVKPNQQVTIVT-K 258
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
+ + KI Q+ GL+RV EA +GDI+ ITGIE + I T+CDP+ LP L +
Sbjct: 259 EGNTRRGKIGQVMTHLGLERVQTEEATAGDIICITGIENLAISDTLCDPADVEALPALTV 318
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT+++ F VN+SP AGR+GKF+T+R I++RL+ E+ +N+ LRV Q + ++VSGR
Sbjct: 319 DEPTVSMTFQVNDSPFAGRDGKFVTSRNIRDRLEQELIHNVALRVEQGDSPEK-FKVSGR 377
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY 1340
GELHL++LIE+MRREG+EL+V RP VI + ++G EPYE + +D EE +QG IM++L Y
Sbjct: 378 GELHLSVLIESMRREGFELAVGRPEVIIREIDGVSQEPYEEVIIDCEEEHQGAIMEELGY 437
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R G+LKN+ + K RVRL++ IP+RGLIGF+ +F+TLT GTG+++ F+ Y P +
Sbjct: 438 RKGELKNMNPDGKGRVRLDFIIPARGLIGFRGQFLTLTSGTGILTSRFDHYGPLKPDASV 497
Query: 1401 DLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPI 1460
+ RRNGVL+S SGKA+AY+L+ LQDRG+L I H VYEGM++GI++R D++VNP
Sbjct: 498 E---RRNGVLVSMVSGKALAYALFALQDRGKLIIEHGTEVYEGMLVGINNRAEDMVVNPT 554
Query: 1461 KEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
K K+L N+RSSGSDEA+ L PI+ TLE AIEF++DDELVE+TP +IRLRK+ L ENERK
Sbjct: 555 KAKKLDNMRSSGSDEALVLTPPIRFTLEQAIEFLDDDELVEVTPNHIRLRKKLLSENERK 614
Query: 1521 KKLHK 1525
+ K
Sbjct: 615 RAKKK 619
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 56/130 (43%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + I N IT L
Sbjct: 19 IAIIAHVDHGKTTLVDKLLQQSGTLDRKAEGQERIMDSNDQEKERGITILAKNTAIRWQG 78
Query: 122 -----------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 79 PDERDYHINIVDTPGHADFGGEVERVMSMVDSVLLMVDAVDGPMPQTRFVTQKAFDQGLK 138
Query: 171 LIVAINKIDK 180
IV +NKID+
Sbjct: 139 PIVVVNKIDR 148
>gi|375264142|ref|YP_005021585.1| BipA protein [Vibrio sp. EJY3]
gi|369839466|gb|AEX20610.1| BipA protein [Vibrio sp. EJY3]
Length = 609
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A+ NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDDQLDFKVVYASALNGWASLEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVDVVDAPNVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R +++A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHDIDQANAGDIIAITGLGELKISDTICAQNAVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLIANAMGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PIK+TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIKMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|242241352|ref|YP_002989533.1| GTP-binding protein TypA [Dickeya dadantii Ech703]
gi|242133409|gb|ACS87711.1| GTP-binding protein TypA [Dickeya dadantii Ech703]
Length = 607
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + + R+MDSN++EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGERTELTERVMDSNDLEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLDHNDMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + N P Q+QI L+Y++Y+G IGIGRI G +K Q V I++ K
Sbjct: 189 AIVKHVEAPNVDLNGPFQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVSIIDST-GKVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ Q+ GL R+ ++A +GDI+ +TG+ ++ I T+CD + LP L++DEPT+
Sbjct: 248 NAKVGQVLGHLGLQRIESDKAEAGDIIALTGLGDLNISDTVCDTANVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFCVNTSPFCGKEGKFVTSRQILDRLRKELVHNVALRVEETEDPDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+T++G EP+E + VDIEE +QG +M+ L R G++
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFRTIDGRRQEPFEQVTVDIEEQHQGSVMEALGLRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ +F+T+T GTGL+ F Y ++G+R
Sbjct: 427 RDMIPDGKGRVRLDYVIPSRGLIGFRTDFMTMTSGTGLLYSTFSHYDDI---RPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIH+R NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAYALFSLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P+K++LE A+EFI+DDELVE+TP++IRLRKR L EN+R++
Sbjct: 544 TNMRASGTDEATVLVPPVKMSLEQALEFIDDDELVEVTPQSIRLRKRHLTENDRRR 599
Score = 66.6 bits (161), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E +T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGERTELTERVMDSNDLEKERGITILAKNTAINWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|226946596|ref|YP_002801669.1| small GTP-binding protein TypA [Azotobacter vinelandii DJ]
gi|226721523|gb|ACO80694.1| small GTP-binding protein TypA [Azotobacter vinelandii DJ]
Length = 606
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/597 (55%), Positives = 442/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+ SGT + + N R+MDSN+ EKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLKLSGTLDRKEAENERVMDSNDQEKERGITILAKNTAIQWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KVDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHEKMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + P Q+QI L+Y+S+LG IGIGRI G +K+ V + G D K
Sbjct: 189 AIIDHVPAPVVDVEGPFQMQISQLDYNSFLGVIGIGRIARGTVKANSPVAAV-GADGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G+EE+ I T+CDP LP L +D+PT+
Sbjct: 248 NGRILKIMGHHGLQRVEVPEATAGDIVCVSGMEELYISDTLCDPQNVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RLD E+ +N+ LRV Q + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLDKELLHNVALRVEQGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPR-VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+EL+V RP VI + GE EPYE++ +DIEE +QG +M+++ R GD
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIENEAGEKQEPYESVTIDIEEQHQGPVMEQMGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K R+RLEY IP+RGLIGF+N F+T+T GTG+++ F Y P ++
Sbjct: 427 LTNMIPDGKGRIRLEYTIPARGLIGFRNAFLTMTSGTGILTSTFSHYGPI---KAGEVAH 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S +G A+ YSL LQDRG+LF++ + VYEG + GIHSRDNDL++NP K K+
Sbjct: 484 RQNGVLVSMATGTALTYSLETLQDRGKLFLSPGEEVYEGQLAGIHSRDNDLVINPTKAKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L N+R+SG DE IQL +K TLE A+EFI++DELVE+TPK+IRLRK+ L EN+RK+
Sbjct: 544 LDNMRASGKDETIQLTPALKFTLEQALEFIDEDELVEVTPKSIRLRKKLLNENDRKR 600
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 36/246 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKLSGTLDRKEAENERVMDSNDQEKERGITILAKNTAIQWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDKLDINLDRIKQDLISEQVIP--EEYGGAS-----PFISISAKTGV-GIN--KLLEN 225
NK+D+ + D + +Q+ + G P + SA G+ G++ K+ +N
Sbjct: 128 NKVDRPG-----ARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHEKMDDN 182
Query: 226 IS--LQAEILELKAPVTTPAKGVIIE-SRLDKGK--GPVATVLIQSGTLRCSDIVVAGAS 280
+ QA I + APV ++ S+LD G + I GT++ + V A +
Sbjct: 183 MDALFQAIIDHVPAPVVDVEGPFQMQISQLDYNSFLGVIGIGRIARGTVKANSPVAAVGA 242
Query: 281 YGRIRS 286
G+ R+
Sbjct: 243 DGKKRN 248
>gi|343503531|ref|ZP_08741348.1| GTPase [Vibrio tubiashii ATCC 19109]
gi|418477907|ref|ZP_13047025.1| GTPase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342811216|gb|EGU46266.1| GTPase [Vibrio tubiashii ATCC 19109]
gi|384574446|gb|EIF04915.1| GTPase [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 609
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/597 (55%), Positives = 445/597 (74%), Gaps = 5/597 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ +M PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWASLEEGETGEDMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVEEVSAPQVDLEGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V++A +GDI+ ITG+ E+ I TIC ++ LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHDVDQANAGDIIAITGLGELKISDTICAQNQVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 KDMSPDGKGRVRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLI+ +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 INGVLIANAAGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK++
Sbjct: 548 TNVRASGTDDAQVLTPPIIMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKRE 604
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|398797242|ref|ZP_10556565.1| GTP-binding protein TypA/BipA [Pantoea sp. GM01]
gi|398103362|gb|EJL93532.1| GTP-binding protein TypA/BipA [Pantoea sp. GM01]
Length = 606
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+I+ SAL+G A +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIFASALNGIAGLEHTDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + PLQ+QI L+Y++YLG IGIGRI G +K Q V I++ + K
Sbjct: 189 AIVDHVSPPQVEVEAPLQMQISQLDYNNYLGVIGIGRIKRGTVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NGKVGKVLGHLGLERIESTLAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKFVTSRQILERLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ G EP+EN+ +DIEE +QG +MQ + R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREFEGRKQEPFENVTLDIEETHQGSVMQAMGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYMIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P K+TLE AIEFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPQKMTLEQAIEFIDDDELVEVTPLSVRIRKRHLTENDRKR 599
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|268595173|ref|ZP_06129340.1| translation initiation factor IF-2 [Neisseria gonorrhoeae 35/02]
gi|268597522|ref|ZP_06131689.1| translation initiation factor IF-2 [Neisseria gonorrhoeae FA19]
gi|291043423|ref|ZP_06569144.1| translation initiation factor IF-2 [Neisseria gonorrhoeae DGI2]
gi|268548562|gb|EEZ43980.1| translation initiation factor IF-2 [Neisseria gonorrhoeae 35/02]
gi|268551310|gb|EEZ46329.1| translation initiation factor IF-2 [Neisseria gonorrhoeae FA19]
gi|291012659|gb|EFE04644.1| translation initiation factor IF-2 [Neisseria gonorrhoeae DGI2]
Length = 954
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/561 (59%), Positives = 437/561 (77%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL
Sbjct: 389 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLGEGAEAV 448
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 449 EAE-ALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 507
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 508 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 567
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 568 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 627
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+Q+GTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 628 APAKGIIVEARLDKGRGAVATLLVQNGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 687
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 688 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 747
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LS D+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 748 ETQAQSLSVIIKADVQGSYEALAGSLKKLSADEVKVNVLHSGVGGITESDVNLAIASGAF 807
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ EKKE + G EIRQ
Sbjct: 808 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEKKEQVTGTVEIRQ 867
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 868 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 927
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 928 LMLKGYNEIMEG-DQLECFDI 947
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 461 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 507
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 508 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 564
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 565 IDKDTANPERI 575
>gi|448244550|ref|YP_007408603.1| GTP-binding protein [Serratia marcescens WW4]
gi|445214914|gb|AGE20584.1| GTP-binding protein [Serratia marcescens WW4]
gi|453065744|gb|EMF06704.1| GTP-binding protein TypA/BipA [Serratia marcescens VGH107]
Length = 607
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGVDHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++YLG IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSAPQVELEAPFQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVLGHLGLERIDSTLAEAGDIIAITGLGELNISDTICDTNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETDDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +DIEE +QG +MQ + R DL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDIEEQHQGSVMQAMGERKADL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRKR 599
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAINWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|238755597|ref|ZP_04616934.1| GTP-binding protein typA/bipA [Yersinia ruckeri ATCC 29473]
gi|238706197|gb|EEP98577.1| GTP-binding protein typA/bipA [Yersinia ruckeri ATCC 29473]
Length = 607
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALLGIAGEDHNDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V K P Q+QI L+YS+Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIIDHVAAPKVELEAPFQMQISQLDYSNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVLTHMGLERIEATVAEAGDIVAITGLGELNISDTICDVNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLNKELIHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRMIDGRMQEPFENVTLDIEEQHQGAVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMVPDGKGRIRLDYSIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLVSNGQGKAVAFALYKLQDRGKLFIGHGTEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|293398725|ref|ZP_06642901.1| translation initiation factor IF-2 [Neisseria gonorrhoeae F62]
gi|291610865|gb|EFF39964.1| translation initiation factor IF-2 [Neisseria gonorrhoeae F62]
Length = 954
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/561 (59%), Positives = 437/561 (77%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL
Sbjct: 389 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLGEGAEAV 448
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 449 EAE-ALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 507
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 508 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 567
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 568 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 627
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+Q+GTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 628 APAKGIIVEARLDKGRGAVATLLVQNGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 687
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 688 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 747
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LS D+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 748 ETQAQSLSVIIKADVQGSYEALAGSLKKLSADEVKVNVLHSGVGGITESDVNLAIASGAF 807
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ EKKE + G EIRQ
Sbjct: 808 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEKKEQVTGTVEIRQ 867
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 868 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 927
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 928 LMLKGYNEIMEG-DQLECFDI 947
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 461 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 507
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 508 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 564
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 565 IDKDTANPERI 575
>gi|385336064|ref|YP_005890011.1| translation initiation factor IF-2 [Neisseria gonorrhoeae
TCDC-NG08107]
gi|317164607|gb|ADV08148.1| translation initiation factor IF-2 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 943
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/561 (59%), Positives = 437/561 (77%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL
Sbjct: 378 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLGEGAEAV 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 438 EAE-ALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 497 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 557 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+Q+GTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 617 APAKGIIVEARLDKGRGAVATLLVQNGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 677 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LS D+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 737 ETQAQSLSVIIKADVQGSYEALAGSLKKLSADEVKVNVLHSGVGGITESDVNLAIASGAF 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ EKKE + G EIRQ
Sbjct: 797 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEKKEQVTGTVEIRQ 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 857 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 916
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 917 LMLKGYNEIMEG-DQLECFDI 936
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 450 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 497 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 553
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 554 IDKDTANPERI 564
>gi|194099047|ref|YP_002002128.1| translation initiation factor IF-2 [Neisseria gonorrhoeae
NCCP11945]
gi|240014534|ref|ZP_04721447.1| translation initiation factor IF-2 [Neisseria gonorrhoeae DGI18]
gi|240016980|ref|ZP_04723520.1| translation initiation factor IF-2 [Neisseria gonorrhoeae FA6140]
gi|240121056|ref|ZP_04734018.1| translation initiation factor IF-2 [Neisseria gonorrhoeae PID24-1]
gi|268601719|ref|ZP_06135886.1| translation initiation factor IF-2 [Neisseria gonorrhoeae PID18]
gi|268604052|ref|ZP_06138219.1| translation initiation factor IF-2 [Neisseria gonorrhoeae PID1]
gi|268684675|ref|ZP_06151537.1| translation initiation factor IF-2 [Neisseria gonorrhoeae
SK-92-679]
gi|268686953|ref|ZP_06153815.1| translation initiation factor IF-2 [Neisseria gonorrhoeae
SK-93-1035]
gi|238690205|sp|B4RMZ3.1|IF2_NEIG2 RecName: Full=Translation initiation factor IF-2
gi|193934337|gb|ACF30161.1| translation initiation factor IF-2 [Neisseria gonorrhoeae
NCCP11945]
gi|268585850|gb|EEZ50526.1| translation initiation factor IF-2 [Neisseria gonorrhoeae PID18]
gi|268588183|gb|EEZ52859.1| translation initiation factor IF-2 [Neisseria gonorrhoeae PID1]
gi|268624959|gb|EEZ57359.1| translation initiation factor IF-2 [Neisseria gonorrhoeae
SK-92-679]
gi|268627237|gb|EEZ59637.1| translation initiation factor IF-2 [Neisseria gonorrhoeae
SK-93-1035]
Length = 943
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/561 (59%), Positives = 437/561 (77%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL
Sbjct: 378 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLGEGAEAV 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 438 EAE-ALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 497 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 557 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+Q+GTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 617 APAKGIIVEARLDKGRGAVATLLVQNGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 677 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LS D+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 737 ETQAQSLSVIIKADVQGSYEALAGSLKKLSADEVKVNVLHSGVGGITESDVNLAIASGAF 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ EKKE + G EIRQ
Sbjct: 797 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEKKEQVTGTVEIRQ 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 857 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 916
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 917 LMLKGYNEIMEG-DQLECFDI 936
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 450 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 497 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 553
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 554 IDKDTANPERI 564
>gi|254494080|ref|ZP_05107251.1| translation initiation factor IF-2 [Neisseria gonorrhoeae 1291]
gi|268599677|ref|ZP_06133844.1| translation initiation factor IF-2 [Neisseria gonorrhoeae MS11]
gi|226513120|gb|EEH62465.1| translation initiation factor IF-2 [Neisseria gonorrhoeae 1291]
gi|268583808|gb|EEZ48484.1| translation initiation factor IF-2 [Neisseria gonorrhoeae MS11]
Length = 943
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/561 (59%), Positives = 437/561 (77%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL
Sbjct: 378 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLGEGAEAV 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 438 EAE-ALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 497 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 557 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+Q+GTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 617 APAKGIIVEARLDKGRGAVATLLVQNGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 677 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LS D+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 737 ETQAQSLSVIIKADVQGSYEALAGSLKKLSADEVKVNVLHSGVGGITESDVNLAIASGAF 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ EKKE + G EIRQ
Sbjct: 797 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEKKEQVTGTVEIRQ 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 857 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 916
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 917 LMLKGYNEIMEG-DQLECFDI 936
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 450 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 497 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 553
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 554 IDKDTANPERI 564
>gi|254468667|ref|ZP_05082073.1| translation initiation factor IF-2 [beta proteobacterium KB13]
gi|207087477|gb|EDZ64760.1| translation initiation factor IF-2 [beta proteobacterium KB13]
Length = 811
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/539 (62%), Positives = 434/539 (80%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK+LM +G MVTINQVLDQ+TAMI+VEE+GHVA ++ NDPES L + +++
Sbjct: 246 MSVKAAEVIKSLMGMGMMVTINQVLDQDTAMIVVEELGHVAKKAEQNDPESLL--DTDES 303
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
I R P+VT+MGHVDHGKTSLLD+IR T V EAGGITQHIGAY+V T G ++F
Sbjct: 304 IEPILETRPPVVTVMGHVDHGKTSLLDFIRTTKVASGEAGGITQHIGAYHVETKKGMVSF 363
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA VTDIVVLVVAADDGVMPQT EAI HAK + PLIVAINKIDK
Sbjct: 364 LDTPGHEAFTAMRARGAGVTDIVVLVVAADDGVMPQTIEAINHAKAASTPLIVAINKIDK 423
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ N +++K +L++ +VIPEE GG S F+ +SAKTG GI++LL+ I LQAEILELKAP
Sbjct: 424 PEANPEKVKNELMTHEVIPEELGGDSMFLELSAKTGQGIDELLDAILLQAEILELKAPTN 483
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
TPAKG+++ESRLDKG+GPVAT+LIQSG ++ SD+++AG+SYGR+R ML+E I +AGP
Sbjct: 484 TPAKGIVVESRLDKGRGPVATILIQSGIMKSSDMLLAGSSYGRVRVMLDEGANQIKQAGP 543
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE++ V+ +E+KAREI LFRQGKFRDVK +KQ+ K ENMF+ +
Sbjct: 544 SIPVEIVGLSDVPNAGEDVIVLNDERKAREIALFRQGKFRDVKFAKQQAAKLENMFDQMA 603
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ VK L +IIK+DV GS E L SL+ LS ++V+I VIHNAVG +NESDINLA+AS AI
Sbjct: 604 EGDVKTLPLIIKSDVQGSFEALKGSLEKLSNNEVRINVIHNAVGAVNESDINLAVASNAI 663
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
II FNVRA+ RK A+ N+I IRY++IIY+ + ++K+ +T ++ ++KEN+LG EIR+
Sbjct: 664 IIAFNVRAEGGARKSAESNDIEIRYYSIIYDAVDDVKAALTGMLSPDEKENVLGSIEIRE 723
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ V+K+ IAGCY+ +GL++R+SK+R+LR+ +I+ GEL SLKRFKD+VKEVK+ FEC
Sbjct: 724 IYKVSKIGSIAGCYVTDGLVKRESKVRVLRDNVVIYDGELSSLKRFKDDVKEVKSNFEC 782
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 21/153 (13%)
Query: 910 QNLFLSDENIYILIKS-----AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNE 964
++L +DE+I ++++ ++ HVDHGKT+L+D I + S E
Sbjct: 295 ESLLDTDESIEPILETRPPVVTVMGHVDHGKTSLLDF-------------IRTTKVASGE 341
Query: 965 IEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMP 1024
GIT +E ++ +DTPGH F R + D V+L++ A +G MP
Sbjct: 342 A---GGITQHIGAYHVETKKGMVSFLDTPGHEAFTAMRARGAGVTDIVVLVVAADDGVMP 398
Query: 1025 QTRFVTRKALKLGFKPIVVVNKIDRSNARPEWV 1057
QT A IV +NKID+ A PE V
Sbjct: 399 QTIEAINHAKAASTPLIVAINKIDKPEANPEKV 431
>gi|416893141|ref|ZP_11924427.1| TypA protein [Aggregatibacter aphrophilus ATCC 33389]
gi|347814169|gb|EGY30819.1| TypA protein [Aggregatibacter aphrophilus ATCC 33389]
Length = 616
Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/597 (57%), Positives = 447/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + + + R+MDSN+IEKERGITI +KN +I +NG
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFDATRGDADERVMDSNDIEKERGITILAKNTAINWNG 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDCVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +MIPLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLDHDDLATDMIPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+++V K N P Q+QI L+Y++Y+G IG+GRI G +K Q V I++ K
Sbjct: 194 EAIIEHVEPPKVELNAPFQMQISQLDYNNYVGVIGVGRIKRGTVKPNQSVTIIDSF-GKA 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L++DEPT
Sbjct: 253 RNGKIGQVLGHLGLQRYEEDIASAGDIVAITGLGELNISDTICDINNVEALPALSVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIFKQVDGHKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 432 VKDMVPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+LW LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALAYALWGLQERGKLMIDHGTEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +PIK++LE AIEFI+DDELVEITP++IR+RK+ L E +RK+
Sbjct: 549 LTNMRASGKDDAIALTTPIKLSLEQAIEFIDDDELVEITPQSIRIRKKLLTEMDRKR 605
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + F G I A N N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFDATRGDADERVMDSNDIEKERGITILAKNTAINWN 72
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 GYRINIVDTPGHADFGGEVERVLSMVDCVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|320540083|ref|ZP_08039738.1| GTP-binding protein [Serratia symbiotica str. Tucson]
gi|320029749|gb|EFW11773.1| GTP-binding protein [Serratia symbiotica str. Tucson]
Length = 607
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLFDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGTDHNDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ YV + P Q+QI L+Y++YLG IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDYVSAPQVELEAPFQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVLGHMGLERIESTLAEAGDIIAITGLGELNISDTICDTAAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFNVNTSPFCGKEGKFVTSRQILERLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +DIEE +QG +MQ + R DL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDIEEQHQGSVMQAMGERKADL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYD---DVRPGDVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALYGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK+TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRKR 599
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 111/266 (41%), Gaps = 47/266 (17%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLFDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG---INKLLENIS- 227
NK+D + D +D++ ++ E+ P I SA G+ N + E+++
Sbjct: 128 NKVDRPGARPDWVVDQVFDLFVNLDATDEQLD--FPIIYASALMGIAGTDHNDMAEDMTP 185
Query: 228 --------LQAEILELKAPVTTPAK--------GVIIESRLDKGK---GPVATVLIQSGT 268
+ A +EL+AP GVI R+ +GK T++ G
Sbjct: 186 LYQAIVDYVSAPQVELEAPFQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDSEGK 245
Query: 269 LRCSDI--VVAGASYGRIRSMLNENG 292
R + V+ RI S L E G
Sbjct: 246 TRNGKVGKVLGHMGLERIESTLAEAG 271
>gi|192360045|ref|YP_001984116.1| GTP-binding protein TypA [Cellvibrio japonicus Ueda107]
gi|190686210|gb|ACE83888.1| GTP-binding protein TypA [Cellvibrio japonicus Ueda107]
Length = 607
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/596 (54%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKT+++D LLRQSGT + + IMDSN+ E+ERGITI +KN +I++N
Sbjct: 14 AIIAHVDHGKTSMVDQLLRQSGTLDRRDDTGDLIMDSNDQERERGITILAKNTAIKWNDY 73
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLL++DAV GPMPQTRFVT KA + G PIVV+N
Sbjct: 74 RINIVDTPGHADFGGEVERVLSMVDSVLLIVDAVGGPMPQTRFVTSKAFEQGLNPIVVIN 133
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARPEWV+D FDLFD+L A+EEQLDFPV+Y SAL+G A + +M PLF+
Sbjct: 134 KIDRPGARPEWVIDQVFDLFDRLGASEEQLDFPVVYASALNGVAGLDPDNIAEDMTPLFQ 193
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + P Q+QI +L+YSSY+G IGIGRI G + Q VV+++ +
Sbjct: 194 MIVDKVKPPAVDLDGPFQMQISALDYSSYVGVIGIGRITRGSLSPNQQVVVVDH-EGNTR 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KA++ Q+ + GL R+ ++A +GDIV ITG++++ I T+C P LP L+IDEPT+
Sbjct: 253 KARVLQVMGYHGLQRIETDKAYAGDIVCITGVDKLGISDTLCSPEAIEALPPLSIDEPTV 312
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGK++T+R IK+RL+ E+ N+ LRV Q D + VSGRGELHL
Sbjct: 313 SMTFQVNDSPFAGKEGKYVTSRNIKDRLEQELIANVALRVQQGDSPDK-FIVSGRGELHL 371
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL VSRP V+ K ++G ++EP+E + +D+EE +QG +M++L R G+L
Sbjct: 372 SVLIENMRREGYELGVSRPEVVQKIVDGVVHEPFEQVVIDVEEHHQGSVMEELGLRKGEL 431
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N++ + K R++LE+ PSRGLIGF+ +F+T+T G+G+++ +F+ Y P + ++ KR
Sbjct: 432 TNMQPDGKGRIKLEFLCPSRGLIGFRGQFLTMTSGSGIMTSIFDHYGPV---KEGEVAKR 488
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S GK +AY L LQDRGRLF+ VYEG I+GIHSR NDL+VNP K KQL
Sbjct: 489 QNGVLVSMVKGKTLAYGLHPLQDRGRLFLGAGVEVYEGQIVGIHSRSNDLVVNPTKAKQL 548
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A+ L PI+ TLE A+EFI DDELVE+TP++IRLRK+ L ENERK+
Sbjct: 549 TNVRASGTDDALTLSPPIRHTLEQALEFIEDDELVEVTPQSIRLRKKLLTENERKR 604
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS---EAG-------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKTS++D + + + + G GIT + N
Sbjct: 13 IAIIAHVDHGKTSMVDQLLRQSGTLDRRDDTGDLIMDSNDQERERGITILAKNTAIKWND 72
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A G MPQTR + A G+ IV I
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLIVDAVGGPMPQTRFVTSKAFEQGLNPIVVI 132
Query: 176 NKIDK 180
NKID+
Sbjct: 133 NKIDR 137
>gi|416051158|ref|ZP_11577276.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347993353|gb|EGY34721.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 617
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/598 (57%), Positives = 448/598 (74%), Gaps = 7/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYN 983
AIIAHVDHGKTTL+D LL+QSGT +++ +A R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGITILAKNTAINWN 73
Query: 984 GTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV 1043
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV
Sbjct: 74 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFSHGLKPIVV 133
Query: 1044 VNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPL 1103
+NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL
Sbjct: 134 INKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLDHEDLAADMTPL 193
Query: 1104 FEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK 1163
FEAI+++V K N P Q+QI L+Y+SY+G IGIGRI G +K Q V I++ K
Sbjct: 194 FEAIVEHVEPPKVELNAPFQMQISQLDYNSYVGVIGIGRIKRGTVKPNQSVTIIDSF-GK 252
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
KI Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L++DEP
Sbjct: 253 TRNGKIGQVLGHLGLQRYEEDIASAGDIVAITGLGELNISDTICDINNVEALPALSVDEP 312
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
T+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGEL
Sbjct: 313 TVTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGEL 371
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGG 1343
HL++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L+ R G
Sbjct: 372 HLSVLIENMRREGYELAVSRPKVIFKQVDGHKQEPFEQVTIDIEEQHQGAVMEALSIRKG 431
Query: 1344 DLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLG 1403
++K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G
Sbjct: 432 EVKDMVPDGKGRTRLEYMIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIG 488
Query: 1404 KRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEK 1463
+R+NGVLIS +GKA+AY+LW LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K
Sbjct: 489 QRKNGVLISNATGKALAYALWGLQERGKLMIDHGTEVYEGQIIGIHSRSNDLTVNCLQGK 548
Query: 1464 QLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+LTN+R+SG D+AI L +PIK +LE AIEFI+DDELVEITP++IR+RK+ L E +RK+
Sbjct: 549 KLTNMRASGKDDAIALTTPIKFSLEQAIEFIDDDELVEITPQSIRIRKKLLTETDRKR 606
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF--SEAGGITQHIGAYNVVTNHGSITFL-------- 121
+ I+ HVDHGKT+L+D + + + S +G + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGITILAKNTAINW 72
Query: 122 --------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 NDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFSHGLKPIV 132
Query: 174 AINKIDK 180
INK+D+
Sbjct: 133 VINKVDR 139
>gi|251791709|ref|YP_003006430.1| GTP-binding protein TypA [Dickeya zeae Ech1591]
gi|247540330|gb|ACT08951.1| GTP-binding protein TypA [Dickeya zeae Ech1591]
Length = 607
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN++EKERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGERNEATERVMDSNDLEKERGITILAKNTAINWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLDHNDMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V K + N P Q+QI L+Y++Y+G IGIGRI G +K Q V I++ + K
Sbjct: 189 AIVKHVEAPKVDLNGPFQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVSIIDS-EGKVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K++Q+ GL R+ + A +GDI+ ITG+ E+ I TICD S LP L++DEPT+
Sbjct: 248 NGKVSQVLGHLGLQRIESSLAEAGDIIAITGLGELNISDTICDTSCVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLRKELVHNVALRVEETEDPDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+T++G EP+E + VDIEE +QG +M+ L R G++
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFRTIDGRRQEPFEQVTVDIEEQHQGSVMEALGLRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 RDMIPDGKGRVRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYDDI---RPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG +IGIH+R NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAYALFSLQDRGKLFLGHGAEVYEGQVIGIHTRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P+K++LE A+EFI+DDELVE+TP +IRLRKR L EN+R++
Sbjct: 544 TNMRASGTDEATVLVPPVKMSLEQALEFIDDDELVEVTPTSIRLRKRHLTENDRRR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGERNEATERVMDSNDLEKERGITILAKNTAINWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|269103705|ref|ZP_06156402.1| GTP-binding protein TypA/BipA [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163603|gb|EEZ42099.1| GTP-binding protein TypA/BipA [Photobacterium damselae subsp.
damselae CIP 102761]
gi|358410674|gb|AEU10060.1| GTP-binding protein TypA/BipA [Photobacterium damselae subsp.
piscicida]
Length = 609
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/610 (56%), Positives = 448/610 (73%), Gaps = 8/610 (1%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
+S+ I L AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI
Sbjct: 1 MSNPQIDKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITI 60
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+KN +I +N RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA
Sbjct: 61 LAKNTAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
G KPI+V+NKIDR ARPEWV+D FDLFD L AT+EQLDF V+Y SAL+G+A
Sbjct: 121 FAHGLKPILVINKIDRPGARPEWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATMEE 180
Query: 1094 KARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
NM PLF+AI++ V + + LQ+QI L+YSSY+G IG+GR+ G + Q
Sbjct: 181 GETGENMEPLFQAIVENVAAPDVDVDGALQMQISQLDYSSYVGVIGVGRVTRGSVVPNQQ 240
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPN 1213
V ++ G D K+ + + GL+R V +A +GDI+ ITG+ E+ I TICD + P
Sbjct: 241 VCVV-GADGTKRNGKVGTVLGYLGLERHDVEKATAGDIIAITGLGELKISDTICDVNTPE 299
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
LP L++DEPT+T+ F VNNSP AG+EGK++T+R I RL E+ +N+ LRV + + D
Sbjct: 300 ALPALSVDEPTVTMTFQVNNSPFAGKEGKYVTSRNILERLQKELVHNVALRVEETEDPDK 359
Query: 1274 IYEVSGRGELHLTILIENMRREGYELSVSRPRVIFK-TLNGELYEPYENLFVDIEEINQG 1332
+ VSGRGELHL+ILIENMRREGYEL+VSRP VI K NG+L EP+E + +D+ E +QG
Sbjct: 360 -FRVSGRGELHLSILIENMRREGYELAVSRPEVIIKRDENGDLQEPFETVTIDVMEEHQG 418
Query: 1333 IIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYA 1392
IM+ + R G+L ++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y
Sbjct: 419 GIMENIGLRKGELTDMAPDGKGRVRMDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYG 478
Query: 1393 PFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRD 1452
P ++G+R NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG IIGIH+R
Sbjct: 479 PHKGG---NIGQRNNGVLISNATGKALTYALFNLQERGRLFTEHADEVYEGQIIGIHNRS 535
Query: 1453 NDLLVNPIKEKQLTNIRSSGSDEAIQLISP-IKITLEYAIEFINDDELVEITPKNIRLRK 1511
NDL VN +K KQLTN+R+SG+DEA Q++SP IK TLE A+EFI+DDELVEITP++IR+RK
Sbjct: 536 NDLTVNCLKGKQLTNVRASGTDEA-QVLSPAIKYTLEQALEFIDDDELVEITPESIRIRK 594
Query: 1512 RFLKENERKK 1521
+ L EN+RK+
Sbjct: 595 KLLTENDRKR 604
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ I+ I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPILVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|398796182|ref|ZP_10555810.1| GTP-binding protein TypA/BipA [Pantoea sp. YR343]
gi|398204034|gb|EJM90846.1| GTP-binding protein TypA/BipA [Pantoea sp. YR343]
Length = 606
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+I+ SAL+G A +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIFASALNGIAGLEHTDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + PLQ+QI L+Y++YLG IGIGRI G +K Q V I++ + K
Sbjct: 189 AIVDHVSPPQVEVEAPLQMQISQLDYNNYLGVIGIGRIKRGTVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICD LP L++DEPT+
Sbjct: 248 NGKVGKVLGHLGLERIESTLAEAGDIIAITGLGELNISDTICDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKFVTSRQILERLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ G EP+EN+ +DIEE +QG +MQ + R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREHEGRKQEPFENVTLDIEETHQGSVMQAMGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYMIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P K+TLE AIEFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPPQKMTLEQAIEFIDDDELVEVTPLSVRIRKRHLTENDRKR 599
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|238794556|ref|ZP_04638164.1| GTP-binding protein typA/bipA [Yersinia intermedia ATCC 29909]
gi|238726136|gb|EEQ17682.1| GTP-binding protein typA/bipA [Yersinia intermedia ATCC 29909]
Length = 607
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGEDHNDMSADMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP +S PLQ+QI L+Y++Y+G IGIGRI G +K Q V +++ + K
Sbjct: 189 AIIDHVPAPDVDSTGPLQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVTVIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GL+R+ + A +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKIAKVLGHMGLERIEASMAEAGDIVAITGLGELNISDTICDVNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLNKELIHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E++ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRVIDGRNQEPFESVTLDIEEQHQGAVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMVPDGKGRIRLDYMIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLISNGQGKAVAFALYKLQDRGKLFIGHATEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|22127674|ref|NP_671097.1| GTP-binding factor [Yersinia pestis KIM10+]
gi|45439892|ref|NP_991431.1| GTPase [Yersinia pestis biovar Microtus str. 91001]
gi|51594383|ref|YP_068574.1| GTPase [Yersinia pseudotuberculosis IP 32953]
gi|108809507|ref|YP_653423.1| putative GTPase [Yersinia pestis Antiqua]
gi|108810418|ref|YP_646185.1| GTPase [Yersinia pestis Nepal516]
gi|145601119|ref|YP_001165195.1| GTPase [Yersinia pestis Pestoides F]
gi|150260910|ref|ZP_01917638.1| putative GTPase [Yersinia pestis CA88-4125]
gi|153948420|ref|YP_001399029.1| GTP-binding protein TypA/BipA [Yersinia pseudotuberculosis IP 31758]
gi|162420145|ref|YP_001604673.1| GTP-binding protein TypA/BipA [Yersinia pestis Angola]
gi|165926210|ref|ZP_02222042.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166011518|ref|ZP_02232416.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213689|ref|ZP_02239724.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402107|ref|ZP_02307584.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167418821|ref|ZP_02310574.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167427039|ref|ZP_02318792.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470255|ref|ZP_02334959.1| GTP-binding protein TypA/BipA [Yersinia pestis FV-1]
gi|170026395|ref|YP_001722900.1| GTP-binding protein TypA [Yersinia pseudotuberculosis YPIII]
gi|186893370|ref|YP_001870482.1| GTP-binding protein TypA [Yersinia pseudotuberculosis PB1/+]
gi|218927247|ref|YP_002345122.1| GTPase [Yersinia pestis CO92]
gi|229836134|ref|ZP_04456302.1| GTP-binding protein [Yersinia pestis Pestoides A]
gi|229839873|ref|ZP_04460032.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841955|ref|ZP_04462110.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229900600|ref|ZP_04515724.1| GTP-binding protein [Yersinia pestis Nepal516]
gi|270488039|ref|ZP_06205113.1| GTP-binding protein TypA [Yersinia pestis KIM D27]
gi|294502134|ref|YP_003566196.1| putative GTPase [Yersinia pestis Z176003]
gi|384120616|ref|YP_005503236.1| putative GTPase [Yersinia pestis D106004]
gi|384124495|ref|YP_005507109.1| putative GTPase [Yersinia pestis D182038]
gi|384137992|ref|YP_005520694.1| putative GTPase [Yersinia pestis A1122]
gi|384416559|ref|YP_005625921.1| GTP-binding protein [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420544193|ref|ZP_15042456.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-01]
gi|420549717|ref|ZP_15047385.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-02]
gi|420554962|ref|ZP_15052077.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-03]
gi|420560468|ref|ZP_15056841.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-04]
gi|420565850|ref|ZP_15061687.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-05]
gi|420571285|ref|ZP_15066634.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-06]
gi|420576682|ref|ZP_15071513.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-07]
gi|420581796|ref|ZP_15076171.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-08]
gi|420592345|ref|ZP_15085684.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-09]
gi|420597646|ref|ZP_15090449.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-10]
gi|420597892|ref|ZP_15090669.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-11]
gi|420603444|ref|ZP_15095593.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-12]
gi|420608899|ref|ZP_15100542.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-13]
gi|420614446|ref|ZP_15105494.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-14]
gi|420619677|ref|ZP_15110057.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-15]
gi|420624866|ref|ZP_15114748.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-16]
gi|420634907|ref|ZP_15123804.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-19]
gi|420635142|ref|ZP_15124007.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-25]
gi|420640475|ref|ZP_15128821.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-29]
gi|420651238|ref|ZP_15138585.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-32]
gi|420651622|ref|ZP_15138914.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-34]
gi|420656963|ref|ZP_15143738.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-36]
gi|420662090|ref|ZP_15148317.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-42]
gi|420672272|ref|ZP_15157546.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-45]
gi|420677760|ref|ZP_15162543.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-46]
gi|420678148|ref|ZP_15162884.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-47]
gi|420683448|ref|ZP_15167648.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-48]
gi|420694018|ref|ZP_15176987.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-52]
gi|420694139|ref|ZP_15177089.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-53]
gi|420705718|ref|ZP_15186689.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-54]
gi|420710772|ref|ZP_15191296.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-55]
gi|420716261|ref|ZP_15196156.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-56]
gi|420716483|ref|ZP_15196351.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-58]
gi|420722135|ref|ZP_15201158.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-59]
gi|420727704|ref|ZP_15206100.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-60]
gi|420737767|ref|ZP_15215193.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-61]
gi|420738266|ref|ZP_15215628.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-63]
gi|420743272|ref|ZP_15220140.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-64]
gi|420749365|ref|ZP_15225234.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-65]
gi|420760528|ref|ZP_15234629.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-66]
gi|420760629|ref|ZP_15234709.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-71]
gi|420765643|ref|ZP_15239249.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-72]
gi|420770837|ref|ZP_15243897.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-76]
gi|420775855|ref|ZP_15248452.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-88]
gi|420781338|ref|ZP_15253255.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-89]
gi|420786976|ref|ZP_15258178.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-90]
gi|420792461|ref|ZP_15263128.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-91]
gi|420802852|ref|ZP_15272473.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-92]
gi|420802983|ref|ZP_15272583.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-93]
gi|420808243|ref|ZP_15277354.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-94]
gi|420813721|ref|ZP_15282251.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-95]
gi|420819028|ref|ZP_15287087.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-96]
gi|420829266|ref|ZP_15296277.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-98]
gi|420829840|ref|ZP_15296776.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-99]
gi|420834877|ref|ZP_15301319.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-100]
gi|420845218|ref|ZP_15310700.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-101]
gi|420845633|ref|ZP_15311061.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-102]
gi|420850638|ref|ZP_15315566.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-103]
gi|420856417|ref|ZP_15320402.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-113]
gi|421761450|ref|ZP_16198250.1| GTP-binding protein [Yersinia pestis INS]
gi|21960790|gb|AAM87348.1|AE013983_1 putative GTP-binding factor [Yersinia pestis KIM10+]
gi|45434747|gb|AAS60308.1| putative GTPase [Yersinia pestis biovar Microtus str. 91001]
gi|51587665|emb|CAH19265.1| putative GTPase [Yersinia pseudotuberculosis IP 32953]
gi|108774066|gb|ABG16585.1| GTPase [Yersinia pestis Nepal516]
gi|108781420|gb|ABG15478.1| putative GTPase [Yersinia pestis Antiqua]
gi|115345858|emb|CAL18716.1| putative GTPase [Yersinia pestis CO92]
gi|145212815|gb|ABP42222.1| GTPase [Yersinia pestis Pestoides F]
gi|149290318|gb|EDM40395.1| putative GTPase [Yersinia pestis CA88-4125]
gi|152959915|gb|ABS47376.1| GTP-binding protein TypA/BipA [Yersinia pseudotuberculosis IP 31758]
gi|162352960|gb|ABX86908.1| GTP-binding protein TypA/BipA [Yersinia pestis Angola]
gi|165922070|gb|EDR39247.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989664|gb|EDR41965.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205091|gb|EDR49571.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962815|gb|EDR58836.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048482|gb|EDR59890.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167053966|gb|EDR63797.1| GTP-binding protein TypA/BipA [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169752929|gb|ACA70447.1| GTP-binding protein TypA [Yersinia pseudotuberculosis YPIII]
gi|186696396|gb|ACC87025.1| GTP-binding protein TypA [Yersinia pseudotuberculosis PB1/+]
gi|229681939|gb|EEO78031.1| GTP-binding protein [Yersinia pestis Nepal516]
gi|229690265|gb|EEO82319.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229696239|gb|EEO86286.1| GTP-binding protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229706582|gb|EEO92588.1| GTP-binding protein [Yersinia pestis Pestoides A]
gi|262360212|gb|ACY56933.1| putative GTPase [Yersinia pestis D106004]
gi|262364159|gb|ACY60716.1| putative GTPase [Yersinia pestis D182038]
gi|270336543|gb|EFA47320.1| GTP-binding protein TypA [Yersinia pestis KIM D27]
gi|294352593|gb|ADE62934.1| putative GTPase [Yersinia pestis Z176003]
gi|320017063|gb|ADW00635.1| GTP-binding protein [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342853121|gb|AEL71674.1| putative GTPase [Yersinia pestis A1122]
gi|391434446|gb|EIQ95638.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-01]
gi|391434685|gb|EIQ95851.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-02]
gi|391438931|gb|EIQ99635.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-03]
gi|391450458|gb|EIR10091.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-05]
gi|391450934|gb|EIR10498.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-04]
gi|391452382|gb|EIR11788.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-06]
gi|391453808|gb|EIR13082.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-09]
gi|391466269|gb|EIR24360.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-07]
gi|391467892|gb|EIR25822.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-10]
gi|391468388|gb|EIR26268.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-08]
gi|391484779|gb|EIR40998.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-12]
gi|391485342|gb|EIR41495.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-11]
gi|391498756|gb|EIR53486.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-13]
gi|391499313|gb|EIR53945.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-15]
gi|391500332|gb|EIR54848.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-19]
gi|391502276|gb|EIR56590.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-14]
gi|391513891|gb|EIR67054.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-16]
gi|391516522|gb|EIR69413.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-25]
gi|391516847|gb|EIR69701.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-32]
gi|391530148|gb|EIR81760.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-29]
gi|391532076|gb|EIR83509.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-34]
gi|391535327|gb|EIR86407.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-45]
gi|391546547|gb|EIR96526.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-36]
gi|391548423|gb|EIR98225.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-46]
gi|391548929|gb|EIR98675.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-42]
gi|391563003|gb|EIS11361.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-52]
gi|391563491|gb|EIS11800.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-47]
gi|391565454|gb|EIS13565.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-48]
gi|391566744|gb|EIS14697.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-54]
gi|391578699|gb|EIS24922.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-55]
gi|391579150|gb|EIS25311.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-53]
gi|391579964|gb|EIS26018.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-56]
gi|391606739|gb|EIS49436.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-60]
gi|391608500|gb|EIS50980.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-58]
gi|391608536|gb|EIS51013.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-61]
gi|391609154|gb|EIS51581.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-59]
gi|391622201|gb|EIS63158.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-63]
gi|391623477|gb|EIS64264.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-66]
gi|391631584|gb|EIS71201.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-64]
gi|391632878|gb|EIS72359.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-65]
gi|391643946|gb|EIS82055.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-71]
gi|391647004|gb|EIS84690.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-72]
gi|391656519|gb|EIS93146.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-76]
gi|391664683|gb|EIT00372.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-88]
gi|391669744|gb|EIT04853.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-89]
gi|391670239|gb|EIT05299.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-90]
gi|391673391|gb|EIT08118.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-91]
gi|391673828|gb|EIT08500.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-92]
gi|391687866|gb|EIT21139.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-93]
gi|391690602|gb|EIT23620.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-94]
gi|391692066|gb|EIT24938.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-98]
gi|391702732|gb|EIT34585.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-95]
gi|391705338|gb|EIT36897.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-96]
gi|391706197|gb|EIT37654.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-101]
gi|391717214|gb|EIT47601.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-99]
gi|391721163|gb|EIT51126.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-100]
gi|391731998|gb|EIT60626.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-102]
gi|391735745|gb|EIT63854.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-103]
gi|391737899|gb|EIT65746.1| GTP-binding protein TypA/BipA [Yersinia pestis PY-113]
gi|411177772|gb|EKS47784.1| GTP-binding protein [Yersinia pestis INS]
Length = 607
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 449/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGEDHNDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP +S+ PLQ+QI L+Y++Y+G IGIGRI G +K Q V +++ + K
Sbjct: 189 AIIDHVPAPDVDSSGPLQMQISQLDYNNYVGVIGIGRIKRGIVKPNQQVTVIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ +A +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVLGHMGLERIETTQAEAGDIVAITGLGELNISDTICDVNAVEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLNKELIHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E++ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRIIDGRNQEPFESVTLDIEEQHQGAVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KDMIPDGKGRIRLDYMIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGDIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLISNGQGKAVAFALYKLQDRGKLFIGHGTEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|238759867|ref|ZP_04621023.1| GTP-binding protein typA/bipA [Yersinia aldovae ATCC 35236]
gi|238701928|gb|EEP94489.1| GTP-binding protein typA/bipA [Yersinia aldovae ATCC 35236]
Length = 607
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGEDHNDMSADMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP +S+ PLQ+QI L+Y++Y+G IGIGRI G +K Q V +++ + K
Sbjct: 189 AIVDHVPAPDVDSSGPLQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVTVIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVAKVLGHMGLERIEATMAEAGDIVAITGLGELNISDTICDVNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLNKELIHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E++ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRVIDGRNQEPFESVTLDIEEQHQGAVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMVPDGKGRIRLDYMIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLISNGQGKAVAFALYKLQDRGKLFIGHATEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|90414674|ref|ZP_01222645.1| putative virulence regulator BipA [Photobacterium profundum 3TCK]
gi|90324216|gb|EAS40791.1| putative virulence regulator BipA [Photobacterium profundum 3TCK]
Length = 609
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/608 (55%), Positives = 443/608 (72%), Gaps = 5/608 (0%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
+S++ I L AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI
Sbjct: 1 MSNQLIDKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITI 60
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+KN +I +N RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA
Sbjct: 61 LAKNTAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
G KPIVV+NKIDR ARPEWV+D FDLFD L AT+EQLDF +Y SAL+G+A
Sbjct: 121 FAYGLKPIVVINKIDRPGARPEWVMDQIFDLFDNLGATDEQLDFTTVYASALNGWATMEE 180
Query: 1094 KARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
+M PLF+A++ V + + PLQ+Q+ L+YSSY+G IG+ RI G +K Q
Sbjct: 181 GVVGEDMEPLFQAVVDNVAAPCVDVDGPLQMQVSQLDYSSYVGVIGVARIARGSVKPNQQ 240
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPN 1213
V I+N K N K+ + + GL+R V EA +GDI+ ITG+ E+ I TICD +
Sbjct: 241 VTIINAEGKKRN-GKVGTVLGYLGLERHEVEEAKAGDIIAITGLGELKISDTICDVNTVE 299
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
LP L++DEPT+T+ F VN SP AG+EGKF+T+R I RL E+ +N+ LRV + D
Sbjct: 300 ALPALSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLQKELVHNVALRVEETDSPDR 359
Query: 1274 IYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGI 1333
+ VSGRGELHL+ILIENMRREG+EL+VSRP VI KT++GEL EP+E + +D+ E +QG
Sbjct: 360 -FRVSGRGELHLSILIENMRREGFELAVSRPEVIIKTIDGELMEPFEMVTIDVVEEHQGS 418
Query: 1334 IMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
+M+ + R G+LK++ + K RVR+++ +PSRGLIGFQ EF+T+T G+GLI H ++ Y P
Sbjct: 419 VMENIGIRKGELKDMAPDGKGRVRMDFMMPSRGLIGFQTEFLTMTSGSGLIYHSYDHYGP 478
Query: 1394 FYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDN 1453
+G+R NGVLIS +GKAV YSL+ LQ+RGRLF H D VYEG IIGIH+R N
Sbjct: 479 HKGGV---IGQRSNGVLISNGTGKAVTYSLFNLQERGRLFSEHGDEVYEGQIIGIHNRAN 535
Query: 1454 DLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRF 1513
DL +N ++ KQLTN+R+SG+DEA L IK TLE A+EFI+DDELVE+TP ++R+RK+
Sbjct: 536 DLTINCLRGKQLTNVRASGTDEAQTLSPAIKHTLEQALEFIDDDELVEVTPVSVRIRKKL 595
Query: 1514 LKENERKK 1521
L EN+RK+
Sbjct: 596 LTENDRKR 603
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAYGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|238750775|ref|ZP_04612273.1| GTP-binding protein typA/bipA [Yersinia rohdei ATCC 43380]
gi|238710919|gb|EEQ03139.1| GTP-binding protein typA/bipA [Yersinia rohdei ATCC 43380]
Length = 607
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGEDHNDMAADMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP +S PLQ+QI L+Y++Y+G IGIGRI G +K Q V I++ + K
Sbjct: 189 AIIDHVPAPDVDSTGPLQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVLGHMGLERIETTLAEAGDIVAITGLGELNISDTICDVNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLNKELIHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E++ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRIIDGRNQEPFESVTLDIEEQHQGAVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMVPDGKGRIRLDYMIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLISNGQGKAVAFALFKLQDRGKLFIGHGTEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|88705260|ref|ZP_01102971.1| GTP-binding protein typA/BipA [Congregibacter litoralis KT71]
gi|88700350|gb|EAQ97458.1| GTP-binding protein typA/BipA [Congregibacter litoralis KT71]
Length = 603
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 441/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + RIMDSN+ E+ERGITI +KN +I Y
Sbjct: 9 AIIAHVDHGKTTLVDCLLRQSGTLDRRNADAERIMDSNDQERERGITILAKNTAITYGDH 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT KA G +PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAQGLQPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLFD L A+EEQLDFP+IY SAL G + + + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFDALGASEEQLDFPIIYASALEGISGLDHEDMATDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL++VP + + PLQLQ+ +L+Y+SY+G IG+GRI G ++ V +++ K N
Sbjct: 189 TILEHVPAPDVDVDGPLQLQVSALDYNSYVGVIGVGRITRGVLRPNTQVAVIDREGAKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ ++ + GL+R+ EA +GDIV +TGIEE+ I T+CDP+ P+ LP L++DEPT+
Sbjct: 249 -GRVLKVMGYMGLERIDTTEASAGDIVCVTGIEELNISDTLCDPANPDALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGK++T+R I RL+ E+ +N+ LRV D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKYVTSRNIAERLERELIHNVALRVEPGDTPDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL VSRP VI K ++G ++EP+E L +D E+ +QG +M++L R +L
Sbjct: 367 SVLIETMRREGFELGVSRPEVIRKEVDGVIHEPFEELVIDCEDQHQGALMEELGARRAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RLE+ +P+RGLIGF++ F+TLT G+G ++H+F+ Y P + + R
Sbjct: 427 KNMSPDGKGWTRLEFIVPARGLIGFRSLFLTLTSGSGTLTHIFDHYGPVKDAP---ISHR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S GK +AY L+ LQDRGRLF++ N VYEG IIG+HSR NDL VNP K KQL
Sbjct: 484 NNGVLVSMVKGKTLAYGLFNLQDRGRLFVDPNIDVYEGQIIGLHSRGNDLTVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L P + TLE A+EFI DDELVE+TP +IRLRK+ L E+ERK+
Sbjct: 544 TNVRASGTDEALVLTPPTRHTLEQALEFIEDDELVEVTPDSIRLRKKLLLEHERKR 599
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIG--------------AYNVVTNHGS 117
+ I+ HVDHGKT+L+D + + + + I A N +G
Sbjct: 8 IAIIAHVDHGKTTLVDCLLRQSGTLDRRNADAERIMDSNDQERERGITILAKNTAITYGD 67
Query: 118 --ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR + A G+ IV I
Sbjct: 68 HRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTSKAFAQGLQPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|54310544|ref|YP_131564.1| virulence regulator BipA [Photobacterium profundum SS9]
gi|46914987|emb|CAG21762.1| putative virulence regulator BipA [Photobacterium profundum SS9]
Length = 614
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/608 (56%), Positives = 442/608 (72%), Gaps = 5/608 (0%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
+S++ I L AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI
Sbjct: 6 MSNQLIDKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITI 65
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+KN +I +N RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA
Sbjct: 66 LAKNTAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 125
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
G KPIVV+NKIDR ARPEWV+D FDLFD L AT+EQLDF +Y SAL+G+A
Sbjct: 126 FAHGLKPIVVINKIDRPGARPEWVMDQIFDLFDNLGATDEQLDFTTVYASALNGWATMEE 185
Query: 1094 KARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
NM PLF+A++ V + + PLQ+Q+ L+YSSY+G IG+ RI G +K Q
Sbjct: 186 DTVGENMEPLFQAVVDNVAAPFVDVDAPLQMQVSQLDYSSYVGVIGVARIARGSVKPNQQ 245
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPN 1213
V I+N K N KI + + GL+R V A +GDIV ITG+ E+ I TICD ++
Sbjct: 246 VTIVNAEGKKRN-GKIGTVLGYLGLERNEVAVAKAGDIVAITGLGELKISDTICDVNEVE 304
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
LP L++DEPT+T+ F VN SP AG+EGKF+T+R I RL E+ +N+ LRV + D
Sbjct: 305 ALPALSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLQKELVHNVALRVEETDSPDR 364
Query: 1274 IYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGI 1333
+ VSGRGELHL+ILIENMRREG+EL+VSRP VI KT++G L EP+E + +D+ E NQG
Sbjct: 365 -FRVSGRGELHLSILIENMRREGFELAVSRPEVIIKTVDGVLMEPFEMVTIDVVEENQGS 423
Query: 1334 IMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
+M+ + R G+LK++ + K RVR+++ +PSRGLIGFQ EF+T+T G+GLI H F+ Y P
Sbjct: 424 VMESIGIRKGELKDMAPDGKGRVRMDFMMPSRGLIGFQTEFLTMTSGSGLIYHSFDHYGP 483
Query: 1394 FYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDN 1453
+G+R NGVLIS +GKAV YSL+ LQ+RGRLF H D VYEG IIGIH+R N
Sbjct: 484 HKGGV---IGQRSNGVLISNGTGKAVTYSLFNLQERGRLFSEHGDEVYEGQIIGIHNRAN 540
Query: 1454 DLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRF 1513
DL +N ++ KQLTN+R+SG+DEA L IK TLE A+EFI+DDELVE+TP ++R+RK+
Sbjct: 541 DLTINCLRGKQLTNVRASGTDEAQTLSPAIKHTLEQALEFIDDDELVEVTPVSVRIRKKL 600
Query: 1514 LKENERKK 1521
L EN+RK+
Sbjct: 601 LTENDRKR 608
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 17 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 76
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 77 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 136
Query: 176 NKIDK 180
NKID+
Sbjct: 137 NKIDR 141
>gi|387121683|ref|YP_006287566.1| TypA protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|415759183|ref|ZP_11481697.1| TypA protein [Aggregatibacter actinomycetemcomitans D17P-3]
gi|416042506|ref|ZP_11574529.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|416044950|ref|ZP_11575162.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|429732940|ref|ZP_19267499.1| GTP-binding protein TypA [Aggregatibacter actinomycetemcomitans Y4]
gi|347991057|gb|EGY32564.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype a str.
H5P1]
gi|347995871|gb|EGY37011.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|348655048|gb|EGY70531.1| TypA protein [Aggregatibacter actinomycetemcomitans D17P-3]
gi|385876175|gb|AFI87734.1| TypA protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|429155234|gb|EKX97928.1| GTP-binding protein TypA [Aggregatibacter actinomycetemcomitans Y4]
Length = 617
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/598 (57%), Positives = 448/598 (74%), Gaps = 7/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYN 983
AIIAHVDHGKTTL+D LL+QSGT +++ +A R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGITILAKNTAINWN 73
Query: 984 GTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV 1043
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV
Sbjct: 74 SYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFSHGLKPIVV 133
Query: 1044 VNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPL 1103
+NK+DR ARP+WVVD FDLF L AT+EQLDFP+IYTSAL+G A + + +M PL
Sbjct: 134 INKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYTSALNGVAGLDHEDLVADMTPL 193
Query: 1104 FEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK 1163
FEAI+++V K N P Q+QI L+Y+SY+G IGIGRI G +K + V I++ K
Sbjct: 194 FEAIVEHVEPPKVELNAPFQMQISQLDYNSYVGVIGIGRIKRGTVKPNKSVTIIDSF-GK 252
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
KI Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L++DEP
Sbjct: 253 TRSGKIGQVLGHLGLQRYEEDIASAGDIVAITGLGELNISDTICDINNVEALPALSVDEP 312
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
T+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGEL
Sbjct: 313 TVTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGEL 371
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGG 1343
HL++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G
Sbjct: 372 HLSVLIENMRREGYELAVSRPKVIFKQVDGHKQEPFEQVTIDIEEQHQGAVMEALGIRKG 431
Query: 1344 DLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLG 1403
++K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G
Sbjct: 432 EVKDMVPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIG 488
Query: 1404 KRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEK 1463
+R+NGVLIS +GKA+AY+LW LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K
Sbjct: 489 QRKNGVLISNATGKALAYALWGLQERGKLMIDHGTEVYEGQIIGIHSRSNDLTVNCLQGK 548
Query: 1464 QLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+LTN+R+SG D+AI L +PIK +LE AIEFI+DDELVEITP++IR+RK+ L E +RK+
Sbjct: 549 KLTNMRASGKDDAIALTTPIKFSLEQAIEFIDDDELVEITPQSIRIRKKLLTETDRKR 606
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 108/253 (42%), Gaps = 48/253 (18%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF--SEAG----------------GITQHIGAYNVVT 113
+ I+ HVDHGKT+L+D + + + S +G GIT I A N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGIT--ILAKNTAI 70
Query: 114 NHGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPL 171
N S I +DTPGH F R + D V+LVV A DG MPQTR A G+
Sbjct: 71 NWNSYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFSHGLKP 130
Query: 172 IVAINKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG--------- 218
IV INK+D + D +D++ ++ E+ P I SA GV
Sbjct: 131 IVVINKVDRPGARPDWVVDQVFDLFVNLGATDEQL--DFPIIYTSALNGVAGLDHEDLVA 188
Query: 219 -INKLLENISLQAEI--LELKAPVTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCSD 273
+ L E I E +EL AP S+LD G + I+ GT++ +
Sbjct: 189 DMTPLFEAIVEHVEPPKVELNAPFQMQI------SQLDYNSYVGVIGIGRIKRGTVKPNK 242
Query: 274 IVVAGASYGRIRS 286
V S+G+ RS
Sbjct: 243 SVTIIDSFGKTRS 255
>gi|260774773|ref|ZP_05883676.1| GTP-binding protein TypA/BipA [Vibrio coralliilyticus ATCC BAA-450]
gi|260609335|gb|EEX35487.1| GTP-binding protein TypA/BipA [Vibrio coralliilyticus ATCC BAA-450]
Length = 609
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 444/597 (74%), Gaps = 5/597 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ +M PLFE
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWASLEEGETGEDMEPLFE 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVEEVTAPQVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V++A +GDIV ITG+ E+ I TIC ++ LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVDQANAGDIVAITGLGELKISDTICAQNQVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQLDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EPYE + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPYETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 TDMSPDGKGRVRMDFIMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---EIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKA+ +L+ LQ+RGR+FI H VYEGM++GIHSRDNDL VN +K KQL
Sbjct: 488 INGVLISNGMGKALTNALFNLQERGRMFIGHGVEVYEGMVVGIHSRDNDLTVNVLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK++
Sbjct: 548 TNVRASGTDDAQVLTPPIIMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKRE 604
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|332159656|ref|YP_004296233.1| putative GTPase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|386310376|ref|YP_006006432.1| GTP-binding protein TypA/BipA [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418243090|ref|ZP_12869584.1| putative GTPase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433548779|ref|ZP_20504827.1| GTP-binding protein TypA/BipA [Yersinia enterocolitica IP 10393]
gi|318603750|emb|CBY25248.1| GTP-binding protein TypA/BipA [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325663886|gb|ADZ40530.1| putative GTPase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330860248|emb|CBX70566.1| GTP-binding protein typA/bipA [Yersinia enterocolitica W22703]
gi|351777452|gb|EHB19664.1| putative GTPase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431790293|emb|CCO67867.1| GTP-binding protein TypA/BipA [Yersinia enterocolitica IP 10393]
Length = 607
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAIKWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGNDHNDMAADMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSPPQVEPDAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVLTHMGLERIEATEAEAGDIVAITGLGELNISDTICDVNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMYFCVNTSPFCGKEGKYVTSRQILDRLNKELIHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+EN+ +DIEE +QG +MQ + R DL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIVREIDGRKQEPFENVTLDIEEQHQGSVMQAMGERKADL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMDPDGKGRVRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGDIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLISNGQGKAVAFALFKLQDRGKLFIGHGTEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPLSIRIRKRHLTENDRKR 599
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAIKWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|293393650|ref|ZP_06637960.1| glutathione-disulfide reductase [Serratia odorifera DSM 4582]
gi|291423985|gb|EFE97204.1| glutathione-disulfide reductase [Serratia odorifera DSM 4582]
Length = 607
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGTDHNDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++YLG IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSAPQVELEAPFQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICD S LP L++DEPT+
Sbjct: 248 NGKVGKVLGHMGLERIESTLAEAGDIIAITGLGELNISDTICDTSAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKFVTSRQILERLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+EN+ +DIEE +QG +MQ + R DL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFENVTLDIEEQHQGSVMQAMGERKADL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALYGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK+TLE A+EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMTLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKR 599
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 112/266 (42%), Gaps = 47/266 (17%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG---INKLLENIS- 227
NK+D + D +D++ ++ E+ P I SA G+ N + E+++
Sbjct: 128 NKVDRPGARPDWVVDQVFDLFVNLDATDEQL--DFPIIYASALMGIAGTDHNDMAEDMTP 185
Query: 228 --------LQAEILELKAPVTTPAK--------GVIIESRLDKGK---GPVATVLIQSGT 268
+ A +EL+AP GVI R+ +GK T++ G
Sbjct: 186 LYQAIVDHVSAPQVELEAPFQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDSEGK 245
Query: 269 LRCSDI--VVAGASYGRIRSMLNENG 292
R + V+ RI S L E G
Sbjct: 246 TRNGKVGKVLGHMGLERIESTLAEAG 271
>gi|183597024|ref|ZP_02958517.1| hypothetical protein PROSTU_00258 [Providencia stuartii ATCC 25827]
gi|386743194|ref|YP_006216373.1| GTP-binding protein [Providencia stuartii MRSN 2154]
gi|188023682|gb|EDU61722.1| GTP-binding protein TypA [Providencia stuartii ATCC 25827]
gi|384479887|gb|AFH93682.1| GTP-binding protein [Providencia stuartii MRSN 2154]
Length = 607
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+ LL+QSGTF + + ++ R+MDSN++EKERGITI +KN +I++N
Sbjct: 10 AIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIKWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDATDGPMPQTRFVTQKAFDNGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DRS ARP+WV+D FDLF L AT+EQLDFP++Y SA++G A + +M PL+E
Sbjct: 130 KVDRSGARPDWVIDQVFDLFVNLGATDEQLDFPIVYASAINGIAGLDHTDMAEDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYV K + P Q+Q+ L+Y+SYLG IGIGRI G +K Q V +++ + K
Sbjct: 190 AIVKYVEPPKVDLEGPFQMQVSQLDYNSYLGVIGIGRIKRGTVKPNQQVTVIDS-EGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GL+R+ A +GDIV +TG+ E+ I TIC+ LP L +DEPT+
Sbjct: 249 NGKIGKVLTHLGLERIDSQHAEAGDIVALTGLGELNISDTICNVGNVEALPALAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP GREGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 309 SMFFCVNTSPFCGREGKYVTSRQILDRLNKELVHNVALRVEETQDPDA-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL VSRP+VIF+ ++G EP+E + +D+EE +QG +M+ L R GDL
Sbjct: 368 SVLIENMRREGFELGVSRPKVIFREVDGRKQEPFEQVTLDVEEQHQGDVMKALGERKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G R
Sbjct: 428 RDMMPDGKGRVRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGGR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 485 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK+TLE A+EFI+DDELVE+TP++IRLRKR L EN+R++
Sbjct: 545 TNMRASGTDEATTLSPPIKMTLEQALEFIDDDELVEVTPQSIRLRKRHLTENDRRR 600
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+ + + + F E + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIKWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 69 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDATDGPMPQTRFVTQKAFDNGLKPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|154706853|ref|YP_001424329.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111]
gi|154356139|gb|ABS77601.1| GTP-binding protein [Coxiella burnetii Dugway 5J108-111]
Length = 602
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 433/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN +E+ERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAVEGPMPQTRFVTRKA G KPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ FDLF L AT+ QLDFPV+Y SAL GYA + +M PLFE
Sbjct: 129 KIDRPGARPDWVVEQVFDLFVSLDATDAQLDFPVVYASALKGYATLDLSHPSTDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + N P Q+QI SL+YSSY+G IGIGRI G I+ V+I++ + K
Sbjct: 189 TIVSKVAPPQVDLNGPFQMQISSLDYSSYVGAIGIGRIQRGTIRRNTPVIIIDR-EGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GL RV + A +GDIV +TGIE + I T+CDP + LP L +DEPT+
Sbjct: 248 SGRVLQLLGFLGLQRVDIETAEAGDIVAVTGIENLRISDTLCDPQQVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGREGKF+T+RQIK RL+ E+ N+ LRV D + VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGREGKFLTSRQIKERLEKELIANVALRVAAGADADK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYE +VSRP VI K ++ EP+ENL +DI+E +QG I+Q L R GDL
Sbjct: 367 SILIENMRREGYEFAVSRPEVIKKMVDDIECEPFENLVLDIDEEHQGDIIQNLAKRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IP+RGLIGF + F+TLT G+G++ HVF+ YAP +S L R
Sbjct: 427 KNMMPDGKGRVRLDYLIPTRGLIGFHSHFLTLTSGSGVMYHVFDHYAPLIEES---LQTR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS G A AY+LW LQ RG LFI VYEGMI+G HSRDNDL+VN +EKQL
Sbjct: 484 HRGVLISNSQGVATAYALWNLQSRGNLFIGPQQAVYEGMIVGQHSRDNDLVVNVCREKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L PIK +LE A++FI DDELVEITP IRLRK+ LKE+ER++
Sbjct: 544 TNIRAAGSDENIILTPPIKFSLEQALQFIADDELVEITPAAIRLRKKLLKEHERRR 599
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + +E + + N++ IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVV 127
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 128 NKIDRPG-----ARPDWVVEQV 144
>gi|381395938|ref|ZP_09921632.1| GTP-binding protein TypA/BipA [Glaciecola punicea DSM 14233 = ACAM
611]
gi|379328503|dbj|GAB56765.1| GTP-binding protein TypA/BipA [Glaciecola punicea DSM 14233 = ACAM
611]
Length = 607
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/592 (56%), Positives = 435/592 (73%), Gaps = 5/592 (0%)
Query: 930 HVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINI 989
HVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN ++ +NG RINI
Sbjct: 14 HVDHGKTTLVDKLLQQSGTLESRGIAEERVMDSNDIEKERGITILAKNTALNWNGYRINI 73
Query: 990 IDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDR 1049
IDTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+NKID+
Sbjct: 74 IDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVLNKIDK 133
Query: 1050 SNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILK 1109
ARP WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ + + +M PLFE I+
Sbjct: 134 PGARPNWVLDQVFDLFDNLGATDEQLDFDVVYASALNGWASNEADVKHDDMTPLFETIVA 193
Query: 1110 YVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKI 1169
V + PLQ+QI L+Y+SY+G IGIGRI G +K Q V ++N K N AK+
Sbjct: 194 KVAPPVADPEGPLQMQISQLDYNSYVGVIGIGRITRGVVKVNQQVTVVNAKGQKRN-AKV 252
Query: 1170 NQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINF 1229
+++ + GLDR V +GDIV ITG+ E+ I T+CD SK L L++DEPT+T+ F
Sbjct: 253 SKVLGYLGLDRYDVESGEAGDIVAITGLGELKISDTVCDISKVEALKPLSVDEPTVTMTF 312
Query: 1230 MVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILI 1289
VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL ILI
Sbjct: 313 QVNTSPFAGKEGKYVTSRNILERLQTELIHNVALRVEETADPDK-FRVSGRGELHLGILI 371
Query: 1290 ENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIE 1349
ENMRREG+EL+VSRP VI K NG+L EP+E L VD+EE +QG +M++L R ++ N+
Sbjct: 372 ENMRREGFELAVSRPEVILKEENGKLLEPFETLTVDVEEKHQGTMMEQLGLRKAEMANMS 431
Query: 1350 INEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
++ K RVRL++ IPSRGLIGFQ +F+T+T G+GL+ H F+ Y P ++G R+NGV
Sbjct: 432 MDGKGRVRLDFIIPSRGLIGFQTDFMTMTSGSGLLYHTFDHYGPHKGG---NIGSRKNGV 488
Query: 1410 LISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIR 1469
LI+ +GKA+ +++ LQ+RGR+FI H VYEGM+IGIHSR+NDL VN +K KQLTN+R
Sbjct: 489 LIANATGKALTNAIFNLQERGRMFIGHGVEVYEGMVIGIHSRENDLTVNALKGKQLTNVR 548
Query: 1470 SSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+SG+DEA L+ PI TLE A+EFI+DDELVE+TP + R+RK+ L ENERK+
Sbjct: 549 ASGTDEAQTLVPPIVYTLEQALEFIDDDELVEVTPVSTRIRKKLLTENERKR 600
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 55/120 (45%), Gaps = 16/120 (13%)
Query: 77 HVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------------- 121
HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 14 HVDHGKTTLVDKLLQQSGTLESRGIAEERVMDSNDIEKERGITILAKNTALNWNGYRINI 73
Query: 122 -DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +NKIDK
Sbjct: 74 IDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVLNKIDK 133
>gi|238764297|ref|ZP_04625248.1| GTP-binding protein typA/bipA [Yersinia kristensenii ATCC 33638]
gi|238697448|gb|EEP90214.1| GTP-binding protein typA/bipA [Yersinia kristensenii ATCC 33638]
Length = 607
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAIKWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGEDHNDMAADMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVLTHMGLERIEATEAEAGDIVAITGLGELNISDTICDVNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLNKELIHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E++ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRVIDGRNQEPFESVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMVPDGKGRIRLDYMIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLISNGQGKAVAFALFKLQDRGKLFIGHGTEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 70.1 bits (170), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAIKWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|251791959|ref|YP_003006679.1| hypothetical protein NT05HA_0154 [Aggregatibacter aphrophilus NJ8700]
gi|422336885|ref|ZP_16417857.1| GTP-binding protein TypA/BipA [Aggregatibacter aphrophilus F0387]
gi|247533346|gb|ACS96592.1| hypothetical protein NT05HA_0154 [Aggregatibacter aphrophilus NJ8700]
gi|353345895|gb|EHB90184.1| GTP-binding protein TypA/BipA [Aggregatibacter aphrophilus F0387]
Length = 616
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/597 (57%), Positives = 446/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + + + R+MDSN+IEKERGITI +KN +I +NG
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFDATRGDADERVMDSNDIEKERGITILAKNTAINWNG 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDCVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLDHDDLATDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+++V K N P Q+QI L+Y++Y+G IG+GRI G +K Q V I++ K
Sbjct: 194 EAIIEHVEPPKVELNAPFQMQISQLDYNNYVGVIGVGRIKRGTVKPNQSVTIIDSF-GKA 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L++DEPT
Sbjct: 253 RNGKIGQVLGHLGLQRYEEDIASAGDIVAITGLGELNISDTICDINNVEALPALSVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIFKQVDGHKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 432 VKDMVPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+LW LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALAYALWGLQERGKLMIDHGTEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +PIK++LE AIEFI+DDELVEITP++IR+RK+ L E +RK+
Sbjct: 549 LTNMRASGKDDAIALTTPIKLSLEQAIEFIDDDELVEITPQSIRIRKKLLTEMDRKR 605
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 106/257 (41%), Gaps = 48/257 (18%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + F G I A N N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFDATRGDADERVMDSNDIEKERGITILAKNTAINWN 72
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 GYRINIVDTPGHADFGGEVERVLSMVDCVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG----------IN 220
INK+D + D +D++ ++ E+ P I SA GV +
Sbjct: 133 INKVDRPGARPDWVVDQVFDLFVNLGATDEQL--DFPIIYASALNGVAGLDHDDLATDMT 190
Query: 221 KLLENI--SLQAEILELKAPVTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCSDIVV 276
L E I ++ +EL AP S+LD G + I+ GT++ + V
Sbjct: 191 PLFEAIIEHVEPPKVELNAPFQMQI------SQLDYNNYVGVIGVGRIKRGTVKPNQSVT 244
Query: 277 AGASYGRIRSMLNENGK 293
S+G+ R NGK
Sbjct: 245 IIDSFGKAR-----NGK 256
>gi|29654209|ref|NP_819901.1| GTP-binding protein TypA [Coxiella burnetii RSA 493]
gi|161831211|ref|YP_001596821.1| GTP-binding protein TypA/BipA [Coxiella burnetii RSA 331]
gi|29541475|gb|AAO90415.1| GTP-binding protein [Coxiella burnetii RSA 493]
gi|161763078|gb|ABX78720.1| GTP-binding protein TypA/BipA [Coxiella burnetii RSA 331]
Length = 602
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/596 (59%), Positives = 432/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN +E+ERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAVEGPMPQTRFVTRKA G KPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ FDLF L AT+ QLDFPV+Y SAL GYA + +M PLFE
Sbjct: 129 KIDRPGARPDWVVEQVFDLFVSLDATDAQLDFPVVYASALKGYATLDLSHPSTDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + N P Q+QI SL+YSSY+G IGIGRI G I+ V+I++ + K
Sbjct: 189 TIVSKVVPPQVDLNGPFQMQISSLDYSSYVGAIGIGRIQRGTIRRNTPVIIIDR-EGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GL RV + A +GDIV +TGIE + I T+CDP + LP L +DEPT+
Sbjct: 248 SGRVLQLLGFLGLQRVDIETAEAGDIVAVTGIENLRISDTLCDPQQVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGREGKF+T+RQIK RL+ E+ N+ LRV D + VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGREGKFLTSRQIKERLEKELIANVALRVAAGADADK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYE SVSRP VI K ++ EP+ENL +DI+E +QG I+Q L R GDL
Sbjct: 367 SILIENMRREGYEFSVSRPEVIKKMVDDIECEPFENLVLDIDEEHQGDIIQNLAKRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ K RVRL+Y IP+RGLIGF + F+TLT G+G++ HVF+ YAP +S L R
Sbjct: 427 KNMMPGGKGRVRLDYLIPTRGLIGFHSHFLTLTSGSGVMYHVFDHYAPLIEES---LQTR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS G A AY+LW LQ RG LFI VYEGMI+G HSRDNDL+VN +EKQL
Sbjct: 484 HRGVLISNSQGVATAYALWNLQSRGNLFIGPQQAVYEGMIVGQHSRDNDLVVNVCREKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L PIK +LE A++FI DDELVEITP IRLRK+ LKE+ER++
Sbjct: 544 TNIRAAGSDENIILTPPIKFSLEQALQFIADDELVEITPAAIRLRKKLLKEHERRR 599
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + +E + + N++ IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVV 127
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 128 NKIDRPG-----ARPDWVVEQV 144
>gi|261868159|ref|YP_003256081.1| TypA protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|415770803|ref|ZP_11485049.1| TypA protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|416071963|ref|ZP_11583977.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|416102718|ref|ZP_11588900.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|444345816|ref|ZP_21153820.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
gi|261413491|gb|ACX82862.1| TypA protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|347998126|gb|EGY39065.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype f str.
D18P1]
gi|348008567|gb|EGY48833.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|348656584|gb|EGY74194.1| TypA protein [Aggregatibacter actinomycetemcomitans D17P-2]
gi|443542357|gb|ELT52694.1| TypA protein [Aggregatibacter actinomycetemcomitans serotype c str.
AAS4A]
Length = 617
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/598 (57%), Positives = 448/598 (74%), Gaps = 7/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYN 983
AIIAHVDHGKTTL+D LL+QSGT +++ +A R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGITILAKNTAINWN 73
Query: 984 GTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV 1043
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV
Sbjct: 74 SYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFSHGLKPIVV 133
Query: 1044 VNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPL 1103
+NK+DR ARP+WVVD FDLF L AT+EQLDFP+IYTSAL+G A + + +M PL
Sbjct: 134 INKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYTSALNGVAGLDHEDLVADMTPL 193
Query: 1104 FEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK 1163
FEAI+++V K N P Q+QI L+Y+SY+G IGIGRI G +K + V I++ K
Sbjct: 194 FEAIVEHVEPPKVELNAPFQMQISQLDYNSYVGVIGIGRIKRGTVKPNKSVTIIDSF-GK 252
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
KI Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L++DEP
Sbjct: 253 TRNGKIGQVLGHLGLQRYEEDIASAGDIVAITGLGELNISDTICDINNVEALPALSVDEP 312
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
T+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGEL
Sbjct: 313 TVTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGEL 371
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGG 1343
HL++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G
Sbjct: 372 HLSVLIENMRREGYELAVSRPKVIFKQVDGHKQEPFEQVTIDIEEQHQGAVMEALGIRKG 431
Query: 1344 DLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLG 1403
++K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G
Sbjct: 432 EVKDMVPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIG 488
Query: 1404 KRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEK 1463
+R+NGVLIS +GKA+AY+LW LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K
Sbjct: 489 QRKNGVLISNATGKALAYALWGLQERGKLMIDHGTEVYEGQIIGIHSRSNDLTVNCLQGK 548
Query: 1464 QLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+LTN+R+SG D+AI L +PIK +LE AIEFI+DDELVEITP++IR+RK+ L E +RK+
Sbjct: 549 KLTNMRASGKDDAIALTTPIKFSLEQAIEFIDDDELVEITPQSIRIRKKLLTETDRKR 606
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 63/129 (48%), Gaps = 22/129 (17%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF--SEAG----------------GITQHIGAYNVVT 113
+ I+ HVDHGKT+L+D + + + S +G GIT I A N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGIT--ILAKNTAI 70
Query: 114 NHGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPL 171
N S I +DTPGH F R + D V+LVV A DG MPQTR A G+
Sbjct: 71 NWNSYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFSHGLKP 130
Query: 172 IVAINKIDK 180
IV INK+D+
Sbjct: 131 IVVINKVDR 139
>gi|89074477|ref|ZP_01160954.1| GTP-binding protein TypA/BipA [Photobacterium sp. SKA34]
gi|89049765|gb|EAR55315.1| GTP-binding protein TypA/BipA [Photobacterium sp. SKA34]
Length = 608
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/608 (56%), Positives = 444/608 (73%), Gaps = 5/608 (0%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
+S+++I L AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI
Sbjct: 1 MSNQSIDKLRNIAIIAHVDHGKTTLVDKLLQQSGTLEGRGEAEERVMDSNDIEKERGITI 60
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+KN +I +N RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA
Sbjct: 61 LAKNTAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
G KPIVV+NKIDR ARPEWV+D FDLFD L AT+EQLDF V+Y SAL+G+A
Sbjct: 121 FAYGLKPIVVINKIDRPGARPEWVMDQIFDLFDNLGATDEQLDFQVVYASALNGWATLEE 180
Query: 1094 KARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
NM PLF++I+ V + + PLQ+QI L+YSSY+G IG+ RI G +K+ Q
Sbjct: 181 GETGENMEPLFQSIVDNVAAPSVDVDGPLQMQISQLDYSSYVGVIGVARITRGAVKANQQ 240
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPN 1213
V I++ K N K+ + + GL+R V EA +GDI+ ITG+ E+ I TICD +
Sbjct: 241 VTIVSADGSKRN-GKVGTVLGYLGLERHEVEEAKAGDIIAITGLGELKISDTICDQNCVE 299
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
L L++DEPT+T+ F VNNSP AG+EGKF+T+R I RL E+ +N+ LRV + D
Sbjct: 300 ALTPLSVDEPTVTMTFQVNNSPFAGKEGKFVTSRNILERLQKELVHNVALRVEETADPDK 359
Query: 1274 IYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGI 1333
+ VSGRGELHL+ILIENMRREGYEL+VSRP VI K +G+ EP+E + +D+ E +QG
Sbjct: 360 -FRVSGRGELHLSILIENMRREGYELAVSRPEVIIKEEDGKQMEPFEVVTIDVVEEHQGG 418
Query: 1334 IMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
IM+ + R G+L ++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P
Sbjct: 419 IMENIGLRKGELTDMAPDGKGRVRMDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGP 478
Query: 1394 FYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDN 1453
+ +G+R NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG IIGIH+R N
Sbjct: 479 HKGGT---IGQRNNGVLISNATGKALTYALFNLQERGRLFSEHADEVYEGQIIGIHNRSN 535
Query: 1454 DLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRF 1513
DL VN +K KQLTN+R+SG+DEA L IK TLE A+EFI++DELVE+TP+NIR+RK+
Sbjct: 536 DLTVNCLKGKQLTNVRASGTDEAQTLSPAIKYTLEQALEFIDNDELVEVTPENIRIRKKL 595
Query: 1514 LKENERKK 1521
L EN+RK+
Sbjct: 596 LTENDRKR 603
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLEGRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAYGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|123440432|ref|YP_001004426.1| putative GTPase [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|420260952|ref|ZP_14763614.1| putative GTPase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|122087393|emb|CAL10174.1| putative GTPase [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|404511587|gb|EKA25460.1| putative GTPase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 607
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAIKWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGNDHNDMAADMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSPPQVEPDAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVLTHMGLERIEATEAEAGDIVAITGLGELNISDTICDVNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMYFCVNTSPFCGKEGKYVTSRQILERLNKELIHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+EN+ +DIEE +QG +MQ + R DL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIVREIDGRKQEPFENVTLDIEEQHQGSVMQAMGERKADL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN++ + K RVRL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMDPDGKGRVRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLISNGQGKAVAFALFKLQDRGKLFIGHGTEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERAEATERVMDSNDLEKERGITILAKNTAIKWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|268682511|ref|ZP_06149373.1| translation initiation factor IF-2 [Neisseria gonorrhoeae PID332]
gi|268622795|gb|EEZ55195.1| translation initiation factor IF-2 [Neisseria gonorrhoeae PID332]
Length = 943
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/561 (59%), Positives = 436/561 (77%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ +DQ+TA+I+VEE+GH+ + +DPE+FL
Sbjct: 378 MAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLGEGAEAV 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 438 EAE-ALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 497 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 557 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+Q+GTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 617 APAKGIIVEARLDKGRGAVATLLVQNGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 677 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LS D+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 737 ETQAQSLSVIIKADVQGSYEALAGSLKKLSADEVKVNVLHSGVGGITESDVNLAIASGAF 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+ KLA+ N+ IRY+NIIY+ I ++K+ ++ ++ EKKE + G EIRQ
Sbjct: 797 IIGFNVRADASSHKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEKKEQVTGTVEIRQ 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 857 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 916
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 917 LMLKGYNEIMEG-DQLECFDI 936
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 450 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 497 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 553
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 554 IDKDTANPERI 564
>gi|443471255|ref|ZP_21061328.1| GTP-binding protein TypA/BipA [Pseudomonas pseudoalcaligenes KF707]
gi|442901158|gb|ELS27157.1| GTP-binding protein TypA/BipA [Pseudomonas pseudoalcaligenes KF707]
Length = 605
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+ SGT + + N R+MDSN+ EKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLKLSGTLDRKEAENERVMDSNDQEKERGITILAKNTAIKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHENMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VPV + + P Q+QI L+Y+S+LG IGIGRI G+IK+ VV ++ K N
Sbjct: 189 AIIDHVPVPDVDVDGPFQMQISQLDYNSFLGVIGIGRIARGKIKTNTPVVAISDDGTKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ +I GL RV V EA +GDIV ++G+EE+ I T+CDP P L +D+PT+
Sbjct: 249 -GRVLKIMGHSGLQRVEVAEAEAGDIVCVSGMEELFISDTLCDPQHVEARPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RLD E+ +N+ LRV + + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLDKELLHNVALRVEAGESAEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E++V RP V+ +GE EPYEN+ +DIEE +QG +M+++ R GDL
Sbjct: 367 SVLIETMRREGFEMAVGRPEVVIIEKDGEKQEPYENVTIDIEEQHQGSVMEQMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+N F+TLT GTG+++ F Y P ++ R
Sbjct: 427 TNMIPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGTGILTSTFSHYGPI---KAGEVSNR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+L
Sbjct: 484 QNGVLVSMATGTALTYSLETLQSRGKLFLAPGDEIYEGQLCGINSRDNDLVINPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
N+R+SG DE I L+ PIK TLE A+EFI DDELVE+TPK+IRLRK+ L EN+RK+
Sbjct: 544 DNMRASGKDEVIALVPPIKFTLEQALEFIADDELVEVTPKSIRLRKKLLNENDRKR 599
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKLSGTLDRKEAENERVMDSNDQEKERGITILAKNTAIKWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|345428874|ref|YP_004821990.1| GTP-binding protein [Haemophilus parainfluenzae T3T1]
gi|301154933|emb|CBW14396.1| GTP-binding protein [Haemophilus parainfluenzae T3T1]
Length = 616
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/597 (56%), Positives = 451/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +NG
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESTRGDVDERVMDSNDLEKERGITILAKNTAINWNG 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+++V K + P Q+QI L+Y+SY+G IGIGRI G IK Q V I++G + K
Sbjct: 194 EAIVQHVEPPKVELDAPFQMQISQLDYNSYVGVIGIGRIKRGSIKPNQPVTIIDG-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ ++ Q+ GL R + A +GDI+ ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRVGQVLGHLGLQRYEEDVAYAGDIIAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ +NG+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYREINGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ EF+T+T GTGL+ F+ Y ++G+
Sbjct: 432 VRDMMPDGKGRVRLEYIIPSRGLIGFRGEFMTMTSGTGLLYSSFDHYDDI---KPGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALAYALFGLQERGKLMIEANVEVYEGQIIGIHSRTNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K TLE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFTLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF-SEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F S G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESTRGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 GYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|418464138|ref|ZP_13035079.1| TypA protein [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359757318|gb|EHK91473.1| TypA protein [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 617
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/598 (56%), Positives = 447/598 (74%), Gaps = 7/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYN 983
AIIAHVDHGKTTL+D LL+QSGT +++ +A R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGITILAKNTAINWN 73
Query: 984 GTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV 1043
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV
Sbjct: 74 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFSHGLKPIVV 133
Query: 1044 VNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPL 1103
+NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + +M PL
Sbjct: 134 INKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLDHEDLAADMTPL 193
Query: 1104 FEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK 1163
FEAI+++V K N P Q+QI L+Y+SY+G IGIGRI G +K Q V I++ K
Sbjct: 194 FEAIVEHVEPPKVELNAPFQMQISQLDYNSYVGVIGIGRIKRGMVKPNQSVTIIDSF-GK 252
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
KI Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L++DEP
Sbjct: 253 TRNGKIGQVLGHLGLQRYKEDIASAGDIVAITGLGELNISDTICDINNVEALPALSVDEP 312
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
T+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGEL
Sbjct: 313 TVTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGEL 371
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGG 1343
HL++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G
Sbjct: 372 HLSVLIENMRREGYELAVSRPKVIFKQVDGHKQEPFEQVTIDIEEQHQGAVMEALGIRRG 431
Query: 1344 DLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLG 1403
++K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G
Sbjct: 432 EVKDMVPDGKGRTRLEYMIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIG 488
Query: 1404 KRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEK 1463
+R+NGVLIS +GKA+AY+LW LQ+RG+L I+H VYEG IIGIHSR NDL +N ++ K
Sbjct: 489 QRKNGVLISNATGKALAYALWGLQERGKLMIDHGTEVYEGQIIGIHSRSNDLTINCLQGK 548
Query: 1464 QLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
+LTN+R+SG D+AI L +PIK +LE AIEFI+DDELVEITP++IR+RK+ L E +RK+
Sbjct: 549 KLTNMRASGKDDAIALTTPIKFSLEQAIEFIDDDELVEITPQSIRIRKKLLTETDRKR 606
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF--SEAGGITQHIGAYNVVTNHGSITFL-------- 121
+ I+ HVDHGKT+L+D + + + S +G + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLEASRSGDADERVMDSNDLEKERGITILAKNTAINW 72
Query: 122 --------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 NDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFSHGLKPIV 132
Query: 174 AINKIDK 180
INK+D+
Sbjct: 133 VINKVDR 139
>gi|2995439|emb|CAA12172.1| GTPase [Escherichia coli]
Length = 591
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/587 (56%), Positives = 443/587 (75%), Gaps = 5/587 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL S GKA A++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLTSNGQGKAAAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKR 1512
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKR 590
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|238797628|ref|ZP_04641124.1| GTP-binding protein typA/bipA [Yersinia mollaretii ATCC 43969]
gi|238718492|gb|EEQ10312.1| GTP-binding protein typA/bipA [Yersinia mollaretii ATCC 43969]
Length = 607
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGEDHNDMAPDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP +S PLQ+QI L+Y++Y+G IGIGRI G +K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDSTGPLQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVLGHMGLERIETTLAEAGDIVAITGLGELNISDTICDVTAVEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLNKELIHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E++ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRIIDGRHQEPFESVTLDIEEQHQGAVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYMIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLISNGQGKAVAFALYKLQDRGKLFIGHGTEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|429143598|gb|AFZ77067.1| GTP-binding protein [Gilliamella apicola]
Length = 608
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/599 (56%), Positives = 443/599 (73%), Gaps = 6/599 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRK-NQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + N RIMDSN +EKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLKQSGTLDNLRGDDNERIMDSNALEKERGITILAKNTAIDWNG 68
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+
Sbjct: 69 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVI 128
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL G A + +M PLF
Sbjct: 129 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALMGIAGLEHENMAEDMTPLF 188
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + + P Q+QI L+Y++Y+G IGIGRI GR+K Q V I++ +K
Sbjct: 189 EAIVKHVEPPKVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGRVKPNQQVTIVDSEGNK- 247
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q+ GL R A +GDI+ +TG+ E+ I TICD S LP L +DEPT
Sbjct: 248 RTGKVGQVLGHLGLQRYEAEVAEAGDIIALTGLGELGISDTICDNSCVEALPALTVDEPT 307
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN+SP AG+EGKF+T+RQI RL E+ +N+ LRV + D+ + VSGRGELH
Sbjct: 308 VTMFFNVNSSPFAGKEGKFVTSRQILERLKKELVHNVALRVEETPDPDA-FRVSGRGELH 366
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL VSRP+VIF+ ++G+ EP+E + +DIEE +QG +M+ L R GD
Sbjct: 367 LSVLIENMRREGYELGVSRPKVIFREIDGKKQEPFEQVTLDIEEQHQGSVMEALGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+
Sbjct: 427 LTNMLPDGKGRVRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQ 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGV+IS +GKA+AY+L+ LQDRG+LF+ H VYEG IIGIH+R NDL VN + K+
Sbjct: 484 RNNGVMISNGTGKALAYALYGLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
LTN+R+SG+DEA L PIK++LE A+EFI+DDELVE+TP +IRLRKR L EN+RK+
Sbjct: 544 LTNMRASGTDEATTLSPPIKMSLEQALEFIDDDELVEVTPLSIRLRKRHLTENDRKRAF 602
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D ++++ + + G + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKQSGTLDNLRGDDNERIMDSNALEKERGITILAKNTAIDWN 67
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+L+V A DG MPQTR A G+ IV
Sbjct: 68 GYRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVV 127
Query: 175 INKIDK 180
INK+D+
Sbjct: 128 INKVDR 133
>gi|325577302|ref|ZP_08147786.1| glutathione-disulfide reductase [Haemophilus parainfluenzae ATCC
33392]
gi|325160884|gb|EGC73005.1| glutathione-disulfide reductase [Haemophilus parainfluenzae ATCC
33392]
Length = 616
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/597 (56%), Positives = 451/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +NG
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESTRGDVDERVMDSNDLEKERGITILAKNTAINWNG 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+++V K + P Q+QI L+Y+SY+G IGIGRI G IK Q V I++G + K
Sbjct: 194 EAIVQHVEPPKVELDAPFQMQISQLDYNSYVGVIGIGRIKRGSIKPNQPVTIIDG-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ ++ Q+ GL R + A +GDI+ ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRVGQVLGHLGLQRYEEDVAYAGDIIAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ +NG+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYREINGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ EF+T+T GTGL+ F+ Y ++G+
Sbjct: 432 VRDMMPDGKGRVRLEYIIPSRGLIGFRGEFMTMTSGTGLLYSSFDHYDDI---KPGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALAYALFGLQERGKLMIEANVEVYEGQIIGIHSRTNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K TLE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFTLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF-SEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F S G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESTRGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 GYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|422021465|ref|ZP_16367977.1| GTP-binding protein [Providencia sneebia DSM 19967]
gi|414099323|gb|EKT60966.1| GTP-binding protein [Providencia sneebia DSM 19967]
Length = 607
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+ LL+QSGTF + + ++ R+MDSN++EKERGITI +KN +I++NG
Sbjct: 10 AIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVMSMVDCVLLVVDATDGPMPQTRFVTQKAFDNGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A +M PL+E
Sbjct: 130 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLEYTDMAEDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYV K + P Q+Q+ L+Y+SYLG IGIGRI G +K Q V +++ + K
Sbjct: 190 AIVKYVESPKVDLEGPFQMQVSQLDYNSYLGVIGIGRIKRGVVKPNQQVTVIDS-EGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GL+R+ +A +GDIV +TG+ E+ I TIC+ LP L +DEPT+
Sbjct: 249 NGKIGKVLTHLGLERIDSQQAEAGDIVALTGLGELNISDTICNVGNVEALPALAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ + VN SP GREGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 309 SMFYCVNTSPFCGREGKYVTSRQILDRLNKELVHNVALRVEETQDPDA-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+E + +D+EE +QG +M+ L R GDL
Sbjct: 368 SVLIENMRREGFELAVSRPKVIFREVDGRKQEPFEQVTLDVEEQHQGDVMKALGERKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G R
Sbjct: 428 RDMMPDGKGRVRLDYIIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGGR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 485 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK+TLE A+EFI+DDELVE+TP +IRLRKR L EN+R++
Sbjct: 545 TNMRASGTDEATTLSPPIKMTLEQALEFIDDDELVEVTPLSIRLRKRHLTENDRRR 600
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+ + + + F E + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 69 YRINIVDTPGHADFGGEVERVMSMVDCVLLVVDATDGPMPQTRFVTQKAFDNGLKPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|348028040|ref|YP_004870726.1| GTP-binding protein [Glaciecola nitratireducens FR1064]
gi|347945383|gb|AEP28733.1| GTP-binding protein [Glaciecola nitratireducens FR1064]
Length = 611
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 440/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 12 AIIAHVDHGKTTLVDKLLQQSGTLASRGVAEERVMDSNDIEKERGITILAKNTAINWNEY 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 72 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WVVD FDLFD L AT++QLDF V+Y SA++G+A + +M PLF+
Sbjct: 132 KIDKPGARPDWVVDQVFDLFDNLGATDDQLDFQVVYASAINGWATMDYNEPSEDMTPLFQ 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + PLQ+QI L+Y+SY+G IGIGRI G +K Q V I+N +K N
Sbjct: 192 TIVDQVAAPDADPDGPLQMQISQLDYNSYVGVIGIGRITRGTVKLNQAVTIVNAAGEKRN 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ + GLDR ++ A +GDIV ITG+ E+ I T+CD SK + L++DEPT+
Sbjct: 252 -GKIGKVLGYLGLDRHDIDSAAAGDIVAITGLGELKISDTVCDVSKVEAMKPLSVDEPTV 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AG+EGK++T+R I RL +E+ +N+ LRV + D + VSGRGELHL
Sbjct: 311 IMTFQVNTSPFAGKEGKYVTSRNILERLQNELIHNVALRVEEMSDPDK-FRVSGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI K NG+L EP+E L +D+EE +QG ++++L R G++
Sbjct: 370 GILIENMRREGYELAVSRPEVILKEENGKLMEPFETLTIDVEEQHQGSMIEQLGMRKGEM 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R R+++ IPSRGLIGFQ +F+TLT G+GLI H F+ Y P ++G+R
Sbjct: 430 TNMTPDGKGRTRVDFIIPSRGLIGFQTDFMTLTSGSGLIYHTFDHYGPHKGG---NIGER 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +++ LQ+RGR+FI H VYEGMIIGIHSR+NDL VN +K KQL
Sbjct: 487 KNGVLIANATGKALTNAIFNLQERGRMFIGHGVEVYEGMIIGIHSRENDLTVNALKGKQL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PI TLE A+EFI+DDELVE+TP +IR+RK+ L ENERK+
Sbjct: 547 TNVRASGTDEAQTLVPPIVYTLEQALEFIDDDELVEVTPVSIRIRKKLLTENERKR 602
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDKLLQQSGTLASRGVAEERVMDSNDIEKERGITILAKNTAINWNE 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 71 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 130
Query: 176 NKIDK 180
NKIDK
Sbjct: 131 NKIDK 135
>gi|359298657|ref|ZP_09184496.1| GTP-binding protein [Haemophilus [parainfluenzae] CCUG 13788]
gi|402304449|ref|ZP_10823518.1| GTP-binding protein TypA [Haemophilus sputorum HK 2154]
gi|400377718|gb|EJP30588.1| GTP-binding protein TypA [Haemophilus sputorum HK 2154]
Length = 615
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 447/596 (75%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDIEKERGITILAKNTAINWND 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEELAPDMTPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K + P Q+QI L+Y++Y+G IGIGR+ G IK Q V I++ D
Sbjct: 193 EAIVKYVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRVKRGSIKPNQSVTIIDA-DGNS 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q+ GL+R EA +GDI+ +TG+ E+ I TICD + P LP L +DEPT
Sbjct: 252 RNGKVGQVLGHLGLERYEAQEAFAGDIIALTGLGELNISDTICDINNPEALPALTVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + ++ D + VSGRGELH
Sbjct: 312 VTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETENPDE-FRVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI+K NG+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIYKEENGKKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 488 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRSNDLTVNCLQGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
LTN+R+SG D+AI L +P++++LE A+EFI+DDELVE+TP+++R+RKR L E +RK
Sbjct: 548 LTNMRASGKDDAIVLTTPVRMSLEQALEFIDDDELVEVTPQSVRIRKRLLTETDRK 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + E G I A N N
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDIEKERGITILAKNTAINWN 71
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|212212664|ref|YP_002303600.1| GTP-binding protein [Coxiella burnetii CbuG_Q212]
gi|212011074|gb|ACJ18455.1| GTP-binding protein [Coxiella burnetii CbuG_Q212]
Length = 602
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/596 (59%), Positives = 432/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN +E+ERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAVEGPMPQTRFVTRKA G KPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ FDLF L AT+ QLDFPV+Y SAL GYA + +M PLFE
Sbjct: 129 KIDRPGARPDWVVEQVFDLFVSLDATDAQLDFPVVYASALKGYATLDLSHPSTDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + N P Q+QI SL+YSSY+G IGIGRI G I+ V+I++ + K
Sbjct: 189 TIVSKVAPPQVDLNGPFQMQISSLDYSSYVGAIGIGRIQRGTIRRNTPVIIIDR-EGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GL RV + A +GDIV +TGIE + I T+CDP + LP L +DEPT+
Sbjct: 248 SGRVLQLLGFLGLQRVDIETAEAGDIVAVTGIENLRISDTLCDPQQVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGREGKF+T+RQIK RL+ E+ N+ LRV D + VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGREGKFLTSRQIKERLEKELIANVALRVAAGADADK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYE +VSRP VI K ++ EP+ENL +DI+E +QG I+Q L R GDL
Sbjct: 367 SILIENMRREGYEFAVSRPEVIKKMVDDIECEPFENLVLDIDEEHQGDIIQNLAKRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ K RVRL+Y IP+RGLIGF + F+TLT G+G++ HVF+ YAP +S L R
Sbjct: 427 KNMMPGGKGRVRLDYLIPTRGLIGFHSHFLTLTSGSGVMYHVFDHYAPLIEES---LQTR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS G A AY+LW LQ RG LFI VYEGMI+G HSRDNDL+VN +EKQL
Sbjct: 484 HRGVLISNSQGVATAYALWNLQSRGNLFIGPQQAVYEGMIVGQHSRDNDLVVNVCREKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L PIK +LE A++FI DDELVEITP IRLRK+ LKE+ER++
Sbjct: 544 TNIRAAGSDENIILTPPIKFSLEQALQFIADDELVEITPAAIRLRKKLLKEHERRR 599
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + +E + + N++ IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVV 127
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 128 NKIDRPG-----ARPDWVVEQV 144
>gi|52424318|ref|YP_087455.1| TypA protein [Mannheimia succiniciproducens MBEL55E]
gi|52306370|gb|AAU36870.1| TypA protein [Mannheimia succiniciproducens MBEL55E]
Length = 654
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/610 (55%), Positives = 451/610 (73%), Gaps = 7/610 (1%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFR--KNQNINARIMDSNEIEKERGI 971
+++ +I+ L AIIAHVDHGKTTL+D LL+QSGT +N + + R+MDSN++EKERGI
Sbjct: 39 MAELDIHKLRNIAIIAHVDHGKTTLVDKLLQQSGTLETARNGDSDERVMDSNDLEKERGI 98
Query: 972 TIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
TI +KN +I +N RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+
Sbjct: 99 TILAKNTAINWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQ 158
Query: 1032 KALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANE 1091
KA G KPIVV+NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A
Sbjct: 159 KAFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGL 218
Query: 1092 NSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ +M PLFEAI+++V + N P Q+QI L+Y++Y+G IGIGRI G +K
Sbjct: 219 EHEELAEDMTPLFEAIVQHVEPPQVELNAPFQMQISQLDYNNYVGVIGIGRIKRGTVKPN 278
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSK 1211
Q V I++ K KI Q+ GL R + A +GDIV ITG+ E+ I T+CD +
Sbjct: 279 QSVTIIDS-FGKTRNGKIGQVLGHLGLQRYEEDLAQAGDIVAITGLGELNISDTVCDINA 337
Query: 1212 PNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHD 1271
LP L++DEPT+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + +
Sbjct: 338 VEALPALSVDEPTVTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETPNP 397
Query: 1272 DSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQ 1331
D + VSGRGELHL++LIENMRREGYEL+VSRP+VI+K NG EP+E + +DIEE +Q
Sbjct: 398 DE-FRVSGRGELHLSVLIENMRREGYELAVSRPKVIYKEENGHKQEPFEQVTIDIEEQHQ 456
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G +M+ L R G++K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y
Sbjct: 457 GAVMEALGIRKGEVKDMSPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHY 516
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
+ ++G+R+NGVLIS +GKA+AY+LW LQ+RG+L H VYEG IIGIHSR
Sbjct: 517 D---DVKPGEIGQRKNGVLISNATGKALAYALWGLQERGKLMAEHGQEVYEGQIIGIHSR 573
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
NDL VN ++ K+LTN+R+SG D+AIQL +PIK+TLE AIEFI+DDELVE+TP++IR+RK
Sbjct: 574 TNDLTVNCLQGKKLTNMRASGKDDAIQLTTPIKLTLEQAIEFIDDDELVEVTPQSIRIRK 633
Query: 1512 RFLKENERKK 1521
+ L E +RK+
Sbjct: 634 KLLTEMDRKR 643
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 107/260 (41%), Gaps = 53/260 (20%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG------------------GITQHIGAYNVVT 113
+ I+ HVDHGKT+L+D + + + A GIT I A N
Sbjct: 50 IAIIAHVDHGKTTLVDKLLQQSGTLETARNGDSDERVMDSNDLEKERGIT--ILAKNTAI 107
Query: 114 NHGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPL 171
N I +DTPGH F R + D V+LVV A DG MPQTR A G+
Sbjct: 108 NWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKP 167
Query: 172 IVAINKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG--------- 218
IV INK+D + D +D++ ++ E+ P I SA GV
Sbjct: 168 IVVINKVDRPGARPDWVVDQVFDLFVNLGATDEQLD--FPIIYASALNGVAGLEHEELAE 225
Query: 219 -INKLLENISLQAEI--LELKAPVTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCSD 273
+ L E I E +EL AP S+LD G + I+ GT++ +
Sbjct: 226 DMTPLFEAIVQHVEPPQVELNAPFQMQI------SQLDYNNYVGVIGIGRIKRGTVKPNQ 279
Query: 274 IVVAGASYGRIRSMLNENGK 293
V S+G+ R NGK
Sbjct: 280 SVTIIDSFGKTR-----NGK 294
>gi|419802037|ref|ZP_14327238.1| GTP-binding protein TypA [Haemophilus parainfluenzae HK262]
gi|419845323|ref|ZP_14368599.1| GTP-binding protein TypA [Haemophilus parainfluenzae HK2019]
gi|385191359|gb|EIF38773.1| GTP-binding protein TypA [Haemophilus parainfluenzae HK262]
gi|386416098|gb|EIJ30612.1| GTP-binding protein TypA [Haemophilus parainfluenzae HK2019]
Length = 616
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/597 (56%), Positives = 451/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +NG
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESTRGDVDERVMDSNDLEKERGITILAKNTAINWNG 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+++V K + P Q+QI L+Y+SY+G IGIGRI G IK Q V I++G + K
Sbjct: 194 EAIVQHVEPPKVELDAPFQMQISQLDYNSYVGVIGIGRIKRGAIKPNQPVTIIDG-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ ++ Q+ GL R + A +GDI+ ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRVGQVLGHLGLQRYEEDVAYAGDIIAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ +NG+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYREINGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ EF+T+T GTGL+ F+ Y ++G+
Sbjct: 432 VRDMMPDGKGRVRLEYIIPSRGLIGFRGEFMTMTSGTGLLYSSFDHYDDI---KPGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALAYALFGLQERGKLMIEANVEVYEGQIIGIHSRTNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K TLE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFTLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF-SEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F S G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESTRGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 GYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|323497002|ref|ZP_08102025.1| GTPase [Vibrio sinaloensis DSM 21326]
gi|323317846|gb|EGA70834.1| GTPase [Vibrio sinaloensis DSM 21326]
Length = 609
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 440/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ +M PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWASLEEGETGEDMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVEEVAAPEVDLEGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GLDR V +A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLDRHEVEQANAGDIIAITGLGELKISDTICAQNAVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 TDMSPDGKGRVRMDFIMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---EIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKA+ +L+ LQ+RGR+FI H VYEGM++GIHSRDNDL VN +K KQL
Sbjct: 488 INGVLISNGMGKALTNALFNLQERGRMFIGHGVEVYEGMVVGIHSRDNDLTVNVLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIVMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|221133500|ref|ZP_03559805.1| BipA protein [Glaciecola sp. HTCC2999]
Length = 612
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 438/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT++QLDF V+Y SA++G+A + +M PLFE
Sbjct: 135 KIDKPGARPDWVIDQVFDLFDNLGATDDQLDFQVVYASAINGWATNDVDVPSEDMTPLFE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + Q+QI L+Y+SY+G IG+GRI G +K Q V I+N +K N
Sbjct: 195 TIVEQVAPPAADPEGAFQMQISQLDYNSYVGVIGVGRITRGTVKVNQQVTIVNAEGEKRN 254
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ + GLDR V+ A +GDI+ ITG+ E+ I TICD ++ LP L++DEPT+
Sbjct: 255 -GKVGKVLGYLGLDRHDVDSAAAGDIIAITGLGELKISDTICDVNEVEALPALSVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 314 TMTFQVNTSPFAGKEGKFVTSRNILERLQAELVHNVALRVEEMDDPDK-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI K +G L EP+E + VD++E +QG I+++L R ++
Sbjct: 373 GILIENMRREGYELAVSRPEVILKEEDGVLMEPFETMTVDLQEEHQGSIIEQLGLRKAEM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVR+++ +PSRGLIGFQ +F+TLT G+GL+ H F+ Y P ++G R
Sbjct: 433 TNMTPDGKGRVRVDFVVPSRGLIGFQTDFMTLTSGSGLLYHTFDHYGPHKGG---NIGMR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGR+FI H VYEGMIIGIHSR+NDL VN +K KQL
Sbjct: 490 KNGVLIANATGKALTNALFNLQERGRMFIGHGVEVYEGMIIGIHSRENDLTVNALKGKQL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PI TLE A+EFI+DDELVE+TP++IR+RK+ L ENERK+
Sbjct: 550 TNVRASGTDEAQTLVPPIVYTLEQALEFIDDDELVEVTPESIRIRKKLLTENERKR 605
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 133
Query: 176 NKIDK 180
NKIDK
Sbjct: 134 NKIDK 138
>gi|152977853|ref|YP_001343482.1| GTP-binding protein TypA [Actinobacillus succinogenes 130Z]
gi|150839576|gb|ABR73547.1| GTP-binding protein TypA [Actinobacillus succinogenes 130Z]
Length = 616
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/610 (55%), Positives = 450/610 (73%), Gaps = 7/610 (1%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFR--KNQNINARIMDSNEIEKERGI 971
+++ +I+ L AIIAHVDHGKTTL+D LL+QSGT +N + + R+MDSN++EKERGI
Sbjct: 1 MAELDIHKLRNIAIIAHVDHGKTTLVDKLLQQSGTLEAARNGDADERVMDSNDLEKERGI 60
Query: 972 TIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
TI +KN +I +N RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+
Sbjct: 61 TILAKNTAINWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQ 120
Query: 1032 KALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANE 1091
KA G KPIVV+NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A
Sbjct: 121 KAFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGL 180
Query: 1092 NSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ +M PLFEAI++YV K N P Q+QI L+Y++Y+G IGIGRI G +K
Sbjct: 181 EHEELAEDMTPLFEAIVEYVEPPKVELNAPFQMQISQLDYNNYVGVIGIGRIKRGTVKPN 240
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSK 1211
Q V I++ K KI Q+ GL R + A +GDIV ITG+ E+ I TICD +
Sbjct: 241 QSVTIIDS-FGKTRNGKIGQVLGHLGLQRYEEDLAQAGDIVAITGLGELNISDTICDINA 299
Query: 1212 PNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHD 1271
LP L++DEPT+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + +
Sbjct: 300 VEALPALSVDEPTVTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETPNP 359
Query: 1272 DSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQ 1331
D + VSGRGELHL++LIENMRREGYEL+VSRP+VI+K NG EP+E + +DIEE +Q
Sbjct: 360 DE-FRVSGRGELHLSVLIENMRREGYELAVSRPKVIYKEENGHKQEPFEQVTIDIEEQHQ 418
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G +M+ L R G+++++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y
Sbjct: 419 GAVMEALGIRKGEVRDMSPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHY 478
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
++G+R+NGVLIS +GKA+AY+LW LQ+RG+L + H VYEG IIGIHSR
Sbjct: 479 DDI---KPGEIGQRQNGVLISNATGKALAYALWGLQERGKLMVEHGQEVYEGQIIGIHSR 535
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
NDL VN ++ K+LTN+R+SG D+AIQL +P+K+TLE AIEFI+ DELVE+TP++IR+RK
Sbjct: 536 SNDLTVNCLQGKKLTNMRASGKDDAIQLTTPLKLTLEQAIEFIDGDELVEVTPQSIRIRK 595
Query: 1512 RFLKENERKK 1521
+ L E +RK+
Sbjct: 596 KLLTETDRKR 605
Score = 63.5 bits (153), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 18/127 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA--GGITQHIGAYNVVTNHGSITFL-------- 121
+ I+ HVDHGKT+L+D + + + A G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLEAARNGDADERVMDSNDLEKERGITILAKNTAINW 71
Query: 122 --------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 NDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIV 131
Query: 174 AINKIDK 180
INK+D+
Sbjct: 132 VINKVDR 138
>gi|383816806|ref|ZP_09972196.1| GTP-binding protein TypA [Serratia sp. M24T3]
gi|383294335|gb|EIC82679.1| GTP-binding protein TypA [Serratia sp. M24T3]
Length = 607
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGTDHNDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + +SN PLQ+QI L+Y++Y+G IGIGRI G K Q V I++ + K
Sbjct: 189 AIVDHVSAPQVDSNGPLQMQISQLDYNNYVGVIGIGRIKRGVAKVNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHMGLERIEAATAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + + D+G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRQGDIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG +IGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQVIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE AIEF++DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQAIEFLDDDELVEVTPLSVRIRKRHLTENDRKR 599
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|409393982|ref|ZP_11245238.1| GTP-binding protein TypA [Pseudomonas sp. Chol1]
gi|409396866|ref|ZP_11247821.1| GTP-binding protein TypA [Pseudomonas sp. Chol1]
gi|409118644|gb|EKM95041.1| GTP-binding protein TypA [Pseudomonas sp. Chol1]
gi|409121487|gb|EKM97601.1| GTP-binding protein TypA [Pseudomonas sp. Chol1]
Length = 606
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 443/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLR SGT + + N R+MDSN+ EKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRLSGTLDRKEAENERVMDSNDQEKERGITILAKNTALKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD L AT+EQLDFP++Y SAL+G A + + + NM PLF+
Sbjct: 129 KIDRPGARPDWVVDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHENLEDNMDPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP K + + P Q+QI L+Y+S+LG IGIGRI G IK+ V + G D K
Sbjct: 189 AIIDHVPAPKVDLDGPFQMQISQLDYNSFLGVIGIGRIARGTIKANSPVTAI-GADGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G++E+ I T+CD S LP L +D+PT+
Sbjct: 248 NGRILKIMGHSGLQRVEVAEAEAGDIVCVSGMDELYISDTLCDQSAVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RL+ E+ +N+ LRV + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLEKELLHNVALRVEPGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPR-VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+EL+V RP VI + GE EPYEN+ +DIEE +QG +M+++ R GD
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIENEAGEKQEPYENVTIDIEEQHQGPVMEQMGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRLEY IP+RGLIGF+N F+TLT GTG+++ F Y P ++
Sbjct: 427 LTNMIPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGTGILTSTFSHYGPI---KAGEVTN 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+
Sbjct: 484 RQNGVLVSMATGTALTYSLETLQARGKLFLAPGDEIYEGQLCGINSRDNDLVLNPTKGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L N+R+SG DE I L+ PIK TLE A+EFI DDELVE+TPK+IRLRK++L EN+RK+
Sbjct: 544 LDNMRASGKDEVIALVPPIKFTLEQALEFIADDELVEVTPKSIRLRKKYLNENDRKR 600
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRLSGTLDRKEAENERVMDSNDQEKERGITILAKNTALKWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|152986941|ref|YP_001351169.1| GTP-binding protein TypA/BipA [Pseudomonas aeruginosa PA7]
gi|452879098|ref|ZP_21956240.1| GTP-binding protein TypA [Pseudomonas aeruginosa VRFPA01]
gi|150962099|gb|ABR84124.1| GTP-binding protein TypA/BipA [Pseudomonas aeruginosa PA7]
gi|452184301|gb|EME11319.1| GTP-binding protein TypA [Pseudomonas aeruginosa VRFPA01]
Length = 605
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+ SGT + + + R+MDSN+ EKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLKLSGTLDRKEAESERVMDSNDQEKERGITILAKNTAIKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHEKMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP ++ Q+QI L+Y+S+LG IGIGRI G++KS VV ++ K N
Sbjct: 189 AIIDHVPAPVVDTEGSFQMQISQLDYNSFLGVIGIGRITRGKVKSNTPVVAISDDGSKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G+EE+ I T+CDP LP L +D+PT+
Sbjct: 249 -GRILKIMGHHGLQRVEVAEAEAGDIVCVSGMEELFISDTLCDPQNVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AGREGKF+T+R IK RL+ E+ +N+ LRV Q + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGREGKFVTSRNIKERLEKELLHNVALRVEQGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL+V RP V+ +G EPYEN+ +DIEE +QG +M+++ R GD+
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIEKDGVKQEPYENVSIDIEEQHQGPVMEQMGLRKGDM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RLEY IP+RGLIGF+N F+T+T GTG+++ F+ Y P D+ R
Sbjct: 427 TNMIPDGKGRLRLEYVIPARGLIGFRNAFLTMTSGTGILTSTFDHYGPV---KAGDVAHR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +G A+ YSL LQDRG+LF++ D VYEG + GIHSRDNDL++NP K K+L
Sbjct: 484 QNGVLVSMATGTALTYSLETLQDRGKLFLSPGDEVYEGQLAGIHSRDNDLVINPTKAKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
N+R+SG DE IQL +K TLE A+EFI++DELVE+TPK+IRLRK+ L EN+RK+
Sbjct: 544 DNMRASGKDETIQLTPALKFTLEQALEFIDEDELVEVTPKSIRLRKKLLNENDRKR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 122/287 (42%), Gaps = 47/287 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + ++ + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKLSGTLDRKEAESERVMDSNDQEKERGITILAKNTAIKWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDKLDINLDRIKQDLISEQVIP--EEYGGAS-----PFISISAKTGV-GIN--KLLEN 225
NKID+ + D + +Q+ + G P + SA G+ G++ K+ +N
Sbjct: 128 NKIDRPG-----ARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHEKMDDN 182
Query: 226 IS--LQAEILELKAPVTTPAKGVIIE-SRLDKGK--GPVATVLIQSGTLRCSDIVVA--- 277
+ QA I + APV ++ S+LD G + I G ++ + VVA
Sbjct: 183 MDALFQAIIDHVPAPVVDTEGSFQMQISQLDYNSFLGVIGIGRITRGKVKSNTPVVAISD 242
Query: 278 --GASYGRIRSMLNENGKNILEAGPSIPVEIQGLTKVPFSG-EELFV 321
GRI ++ +G +E E + V SG EELF+
Sbjct: 243 DGSKRNGRILKIMGHHGLQRVEV-----AEAEAGDIVCVSGMEELFI 284
>gi|300714621|ref|YP_003739424.1| Tyrosine phosphorylated protein A [Erwinia billingiae Eb661]
gi|299060457|emb|CAX57564.1| Tyrosine phosphorylated protein A [Erwinia billingiae Eb661]
Length = 607
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/596 (54%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAINWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFPVIY SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPVIYASALNGIAGLDHNDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSPPQVEAEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHMGLERIEAVEAEAGDIIAITGLGELNISDTICDPQAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFEIAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRQGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG +IGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQVIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKR 599
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARTEATERVMDSNDLEKERGITILAKNTAINWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|15600310|ref|NP_253804.1| regulatory protein TypA [Pseudomonas aeruginosa PAO1]
gi|107104213|ref|ZP_01368131.1| hypothetical protein PaerPA_01005286 [Pseudomonas aeruginosa PACS2]
gi|116053264|ref|YP_793587.1| GTP-binding protein TypA [Pseudomonas aeruginosa UCBPP-PA14]
gi|218894216|ref|YP_002443085.1| regulatory protein TypA [Pseudomonas aeruginosa LESB58]
gi|254238177|ref|ZP_04931500.1| regulatory protein TypA [Pseudomonas aeruginosa C3719]
gi|254244002|ref|ZP_04937324.1| regulatory protein TypA [Pseudomonas aeruginosa 2192]
gi|296391967|ref|ZP_06881442.1| regulatory protein TypA [Pseudomonas aeruginosa PAb1]
gi|313110157|ref|ZP_07796057.1| regulatory protein TypA [Pseudomonas aeruginosa 39016]
gi|355643336|ref|ZP_09053246.1| GTP-binding protein TypA/BipA [Pseudomonas sp. 2_1_26]
gi|386061289|ref|YP_005977811.1| regulatory protein TypA [Pseudomonas aeruginosa M18]
gi|386063364|ref|YP_005978668.1| GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
gi|392986794|ref|YP_006485381.1| GTP-binding protein TypA [Pseudomonas aeruginosa DK2]
gi|416861693|ref|ZP_11914696.1| GTP-binding protein TypA [Pseudomonas aeruginosa 138244]
gi|416880186|ref|ZP_11921201.1| GTP-binding protein TypA [Pseudomonas aeruginosa 152504]
gi|418587538|ref|ZP_13151567.1| GTP-binding protein TypA [Pseudomonas aeruginosa MPAO1/P1]
gi|418592852|ref|ZP_13156713.1| GTP-binding protein TypA [Pseudomonas aeruginosa MPAO1/P2]
gi|419756180|ref|ZP_14282531.1| GTP-binding protein TypA [Pseudomonas aeruginosa PADK2_CF510]
gi|421156640|ref|ZP_15616081.1| regulatory protein TypA [Pseudomonas aeruginosa ATCC 14886]
gi|421163748|ref|ZP_15622436.1| regulatory protein TypA [Pseudomonas aeruginosa ATCC 25324]
gi|421170976|ref|ZP_15628879.1| regulatory protein TypA [Pseudomonas aeruginosa ATCC 700888]
gi|421177371|ref|ZP_15635026.1| regulatory protein TypA [Pseudomonas aeruginosa CI27]
gi|421183199|ref|ZP_15640662.1| regulatory protein TypA [Pseudomonas aeruginosa E2]
gi|421519683|ref|ZP_15966354.1| GTP-binding protein TypA [Pseudomonas aeruginosa PAO579]
gi|424944087|ref|ZP_18359850.1| regulatory protein TypA [Pseudomonas aeruginosa NCMG1179]
gi|451986709|ref|ZP_21934880.1| GTP-binding protein TypA/BipA [Pseudomonas aeruginosa 18A]
gi|9951414|gb|AAG08502.1|AE004924_7 regulatory protein TypA [Pseudomonas aeruginosa PAO1]
gi|115588485|gb|ABJ14500.1| GTP-binding protein TypA/BipA [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170108|gb|EAZ55619.1| regulatory protein TypA [Pseudomonas aeruginosa C3719]
gi|126197380|gb|EAZ61443.1| regulatory protein TypA [Pseudomonas aeruginosa 2192]
gi|218774444|emb|CAW30261.1| regulatory protein TypA [Pseudomonas aeruginosa LESB58]
gi|310882559|gb|EFQ41153.1| regulatory protein TypA [Pseudomonas aeruginosa 39016]
gi|334836628|gb|EGM15429.1| GTP-binding protein TypA [Pseudomonas aeruginosa 138244]
gi|334836662|gb|EGM15462.1| GTP-binding protein TypA [Pseudomonas aeruginosa 152504]
gi|346060533|dbj|GAA20416.1| regulatory protein TypA [Pseudomonas aeruginosa NCMG1179]
gi|347307595|gb|AEO77709.1| regulatory protein TypA [Pseudomonas aeruginosa M18]
gi|348031923|dbj|BAK87283.1| GTP-binding protein [Pseudomonas aeruginosa NCGM2.S1]
gi|354829841|gb|EHF13903.1| GTP-binding protein TypA/BipA [Pseudomonas sp. 2_1_26]
gi|375041791|gb|EHS34470.1| GTP-binding protein TypA [Pseudomonas aeruginosa MPAO1/P1]
gi|375048304|gb|EHS40830.1| GTP-binding protein TypA [Pseudomonas aeruginosa MPAO1/P2]
gi|384397265|gb|EIE43677.1| GTP-binding protein TypA [Pseudomonas aeruginosa PADK2_CF510]
gi|392322299|gb|AFM67679.1| GTP-binding protein TypA [Pseudomonas aeruginosa DK2]
gi|404345602|gb|EJZ71954.1| GTP-binding protein TypA [Pseudomonas aeruginosa PAO579]
gi|404518831|gb|EKA29641.1| regulatory protein TypA [Pseudomonas aeruginosa ATCC 14886]
gi|404521663|gb|EKA32233.1| regulatory protein TypA [Pseudomonas aeruginosa ATCC 700888]
gi|404527759|gb|EKA37895.1| regulatory protein TypA [Pseudomonas aeruginosa ATCC 25324]
gi|404529721|gb|EKA39747.1| regulatory protein TypA [Pseudomonas aeruginosa CI27]
gi|404540553|gb|EKA49951.1| regulatory protein TypA [Pseudomonas aeruginosa E2]
gi|451755649|emb|CCQ87403.1| GTP-binding protein TypA/BipA [Pseudomonas aeruginosa 18A]
gi|453046628|gb|EME94344.1| GTP-binding protein TypA [Pseudomonas aeruginosa PA21_ST175]
Length = 605
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 440/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+ SGT + + + R+MDSN+ EKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLKLSGTLDRKEAESERVMDSNDQEKERGITILAKNTAIKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHEKMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP ++ P Q+QI L+Y+S+LG IGIGRI G++KS VV ++ K N
Sbjct: 189 AIIDHVPAPVVDTEGPFQMQISQLDYNSFLGVIGIGRITRGKVKSNTPVVAISDDGSKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G+EE+ I T+CDP LP L +D+PT+
Sbjct: 249 -GRILKIMGHHGLQRVEVAEAEAGDIVCVSGMEELFISDTLCDPQNVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AGREGKF+T+R IK RL+ E+ +N+ LRV + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGREGKFVTSRNIKERLEKELLHNVALRVEPGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL+V RP V+ +GE EPYEN+ +DIEE +QG +M+++ R GDL
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIEKDGEKQEPYENVTIDIEEQHQGSVMEQMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+N F+TLT GTG+++ F Y P ++ R
Sbjct: 427 SNMIPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGTGILTSTFSHYGPI---KAGEVSNR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+L
Sbjct: 484 QNGVLVSMATGTALTYSLETLQSRGKLFLGPGDEIYEGQLAGINSRDNDLVINPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
N+R+SG DE I L+ PI+ TLE A+EFI DDELVE+TPK+IRLRK+ L EN+RK+
Sbjct: 544 DNMRASGKDEVIALVPPIRFTLEQALEFIADDELVEVTPKSIRLRKKMLNENDRKR 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + ++ + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKLSGTLDRKEAESERVMDSNDQEKERGITILAKNTAIKWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|165918553|ref|ZP_02218639.1| GTP-binding protein TypA/BipA [Coxiella burnetii Q321]
gi|165917799|gb|EDR36403.1| GTP-binding protein TypA/BipA [Coxiella burnetii Q321]
Length = 602
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/596 (58%), Positives = 433/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN +E+ERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAVEGPMPQTRFVTRKA G KPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ FDLF L AT+ QLDFPV+Y SAL GYA + +M PLFE
Sbjct: 129 KIDRPGARPDWVVEQVFDLFVSLDATDAQLDFPVVYASALKGYATLDLSHPSTDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + N P Q+QI SL+YSSY+G IGIGRI G I+ V+I++ + K
Sbjct: 189 TIVSKVAPPQVDLNGPFQMQISSLDYSSYVGAIGIGRIQRGTIRRNTPVIIIDR-EGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GL RV + A +GDIV +TGIE + I T+CDP + LP L +DEPT+
Sbjct: 248 SGRVLQLLGFLGLQRVDIETAEAGDIVAVTGIENLRISDTLCDPQQVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGREGKF+T+RQIK RL+ E+ N+ LRV D + VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGREGKFLTSRQIKERLEKELIANVALRVAAGADADK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYE +VSRP VI K ++ EP+ENL +DI+E +QG I+Q L R GDL
Sbjct: 367 SILIENMRREGYEFAVSRPEVIKKMVDDIECEPFENLVLDIDEEHQGDIIQNLAKRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IP+RGLIGF + F+TLT G+G++ HVF+ YAP +S L R
Sbjct: 427 KNMMPDGKGRVRLDYLIPTRGLIGFHSHFLTLTSGSGVMYHVFDHYAPLIEES---LQTR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS G A AY+LW LQ RG LFI VYEG+I+G HSRDNDL+VN +EKQL
Sbjct: 484 HRGVLISNSQGVATAYALWNLQSRGNLFIGPQQAVYEGIIVGQHSRDNDLVVNVCREKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L PIK +LE A++FI DDELVEITP IRLRK+ LKE+ER++
Sbjct: 544 TNIRAAGSDENIILTPPIKFSLEQALQFIADDELVEITPAAIRLRKKLLKEHERRR 599
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + +E + + N++ IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVV 127
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 128 NKIDRPG-----ARPDWVVEQV 144
>gi|238785628|ref|ZP_04629606.1| GTP-binding protein typA/bipA [Yersinia bercovieri ATCC 43970]
gi|238713463|gb|EEQ05497.1| GTP-binding protein typA/bipA [Yersinia bercovieri ATCC 43970]
Length = 607
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGEDHNDMAPDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP +S PLQ+QI L+Y++Y+G IGIGRI G +K Q V +++ + K
Sbjct: 189 AIVDHVPAPDVDSTGPLQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVTVIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDIV ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVLGHMGLERIETTLAEAGDIVAITGLGELNISDTICDVNAVEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLNKELIHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E++ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRIIDGRHQEPFESVTLDIEEQHQGAVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYMIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLISNGQGKAVAFALYKLQDRGKLFIGHGTEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|241764252|ref|ZP_04762283.1| translation initiation factor IF-2 [Acidovorax delafieldii 2AN]
gi|241366375|gb|EER60897.1| translation initiation factor IF-2 [Acidovorax delafieldii 2AN]
Length = 954
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/539 (61%), Positives = 438/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK LMK+GQMVTINQ LDQ+TAMI+VEE+GH A + L+DPE+F +E
Sbjct: 389 MSIKASEVIKALMKMGQMVTINQPLDQDTAMIVVEELGHKAVVAALDDPEAFT-DEDAGQ 447
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ++F
Sbjct: 448 QDVEVLPRAPVVTVMGHVDHGKTSLLDYIRRAKVASGEAGGITQHIGAYHVETPRGMVSF 507
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 508 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAITKADK 567
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N +R+KQ+L+ E+V+PEEYGG SPF+++S+KTG+GI++LLE + LQAE+LELKAPV
Sbjct: 568 PDANPERVKQELVVEEVVPEEYGGDSPFVAVSSKTGMGIDELLEQVLLQAEVLELKAPVD 627
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+ AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG +YGR+R+ML+E+G+ AGP
Sbjct: 628 SLAKGLVIEAKLDKGRGPVATVLVQSGTLKVGDVVLAGQTYGRVRAMLDESGRVAKTAGP 687
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF D+
Sbjct: 688 SIPVEIQGLTEVPQAGDEFMVLTDERRAREIATYRAGKFRNTKLAKQQAAKLENMFADMT 747
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L II+K DV GS+E L +SL LSTD+VK+Q+++ AVG I+ESDINLAIASKAI
Sbjct: 748 AGEVKTLPIIVKADVQGSQEALAQSLLKLSTDEVKVQLVYAAVGAISESDINLAIASKAI 807
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ N +++ Y++IIY+ + E+K ++ ++ E++E ++G AEIR
Sbjct: 808 VIGFNVRADAGARKLAESNGVDLHYYSIIYDAVDELKVAMSGMLAPEQREEIIGTAEIRT 867
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI G++ R++K R+LR+ +++TGE+DS+KR KD+VKEVK GFEC
Sbjct: 868 VFVASKIGTVAGSYITSGMVHRNAKFRLLRDNVVVYTGEVDSVKRLKDDVKEVKEGFEC 926
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 461 VMGHVDHGKTSLLDYIRRAKVASGEAGGITQHI-GAYHVETPRGMVSF------------ 507
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A G +V + K
Sbjct: 508 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAITK 564
Query: 1047 IDRSNARPE 1055
D+ +A PE
Sbjct: 565 ADKPDANPE 573
>gi|359785425|ref|ZP_09288576.1| GTP-binding protein TypA [Halomonas sp. GFAJ-1]
gi|359297157|gb|EHK61394.1| GTP-binding protein TypA [Halomonas sp. GFAJ-1]
Length = 613
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/605 (55%), Positives = 446/605 (73%), Gaps = 10/605 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL QSGT + R+MDSN+ EKERGITI +KN +I++
Sbjct: 14 AIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERVMDSNDQEKERGITILAKNTAIQWQDG 73
Query: 983 NGT--RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
NG INI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA G +P
Sbjct: 74 NGKDYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFSQGLRP 133
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
IVVVNKIDR ARP+WV+D FDLFD L AT+EQLDFP+IY SAL+G A + + NM
Sbjct: 134 IVVVNKIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIIYCSALNGIAGMDPEELADNM 193
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
P+F+AI+ V + P Q+QI +L+Y+SY+G IG+GRI G +K Q + +++
Sbjct: 194 DPMFQAIVDIVEPPAVEIDGPFQMQISALDYNSYVGVIGLGRIKRGSVKPNQQISVIS-V 252
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
D K KI Q+ GL+RV EA +GDIV +TGIE++ I T+CDPS LP L++
Sbjct: 253 DGTTRKGKIGQVMTHMGLERVQTTEATAGDIVCVTGIEDLSISDTLCDPSAIEALPPLSV 312
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT+++ F VN+SP AG+EGKF+T+R IK+RL+ E+ +N+ LRV Q + + ++VSGR
Sbjct: 313 DEPTVSMTFQVNDSPFAGKEGKFVTSRNIKDRLEQELIHNVALRVEQGETPEK-FKVSGR 371
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY 1340
GELHL++LIE MRREG+EL+V RP VI K ++G EPYE + +D EE +QG IM++L Y
Sbjct: 372 GELHLSVLIETMRREGFELAVGRPEVIIKEIDGVKQEPYEEVIIDCEEQHQGSIMEELGY 431
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R G++ N+ + K RVRL++ IP+RGLIGF+ +F+TLT GTG+++ F+ Y P +
Sbjct: 432 RKGEMTNMNPDGKGRVRLDFIIPARGLIGFRGQFLTLTSGTGILTSRFDHYGPLKPDASI 491
Query: 1401 DLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPI 1460
+ RRNGVL+S GKA+AY+L+ LQ+RG+L I+H VYEGM+IGI++R ND++VNP
Sbjct: 492 E---RRNGVLVSMVGGKALAYALYALQERGKLIIDHATEVYEGMLIGINNRANDMVVNPT 548
Query: 1461 KEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
K K+L N+RS+G+DE I L PIK TLE AIEF++ DELVE+TP +IRLRK+ L ENERK
Sbjct: 549 KGKKLDNMRSTGNDENIVLTPPIKFTLEQAIEFLDSDELVEVTPTHIRLRKKHLTENERK 608
Query: 1521 KKLHK 1525
+ K
Sbjct: 609 RSSKK 613
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGGITQHIGAYNVVTNHG-------------- 116
+ I+ HVDHGKT+L+D + ++ + +A G + + + + G
Sbjct: 13 IAIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERVMDSNDQEKERGITILAKNTAIQWQD 72
Query: 117 ------SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
I +DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 73 GNGKDYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFSQGLR 132
Query: 171 LIVAINKIDK 180
IV +NKID+
Sbjct: 133 PIVVVNKIDR 142
>gi|238897302|ref|YP_002922979.1| protein possibly involved in LPS biosynthesis and host colonization
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229465057|gb|ACQ66831.1| protein possibly involved in LPS biosynthesis and host colonization
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 607
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 450/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGTF + R+MDSN++EKERGITI +KN +I++N
Sbjct: 12 AIIAHVDHGKTTLVDKLLEQSGTFGERAETTERVMDSNDLEKERGITILAKNTAIKWNEY 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G +PIVV+N
Sbjct: 72 RINIVDTPGHADFGGEVERVLSMVDSVLLVVDAQDGPMPQTRFVTKKAFAHGLQPIVVIN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLF L AT+EQLDFPVIYTSAL G A + +M PL++
Sbjct: 132 KIDRPGARPDWVVDQVFDLFVNLDATDEQLDFPVIYTSALLGTAGTDYNDMAKDMTPLYQ 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y++Y+G IGIGRI G +K Q +VI++ K
Sbjct: 192 AIIDHVPAPEVELDGPFQMQISQLDYNNYVGVIGIGRIKRGTVKPNQSIVIIDS-QGKTR 250
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK++++ GL+R+ + A +GDI+ ITG+ ++ I T+CD + LP L++DEPT+
Sbjct: 251 NAKVSKVFGHMGLERIEIPLAEAGDIIAITGLGDLNISDTLCDINHIESLPALSVDEPTV 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 311 SMYFCVNTSPFCGKEGKYVTSRQILERLKKELIHNVALRVEETEDSDA-FRVSGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G+ EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 370 SVLIENMRREGFELAVSRPKVINRKVDGQDQEPFENVTLDIEEQHQGSVMQAMGERKGDV 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K R+RL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + D+G+R
Sbjct: 430 KNMIPDGKGRIRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYDLVRSG---DIGQR 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIH+R NDL VN + K+L
Sbjct: 487 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKKL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P+K++LE A+EFI+DDELVEITP++IR+RKR+L EN+RK+
Sbjct: 547 TNMRASGTDEATTLVPPVKMSLEQALEFIDDDELVEITPQSIRIRKRYLTENDRKR 602
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDKLLEQSGTFGERAETTERVMDSNDLEKERGITILAKNTAIKWNE 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 71 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAQDGPMPQTRFVTKKAFAHGLQPIVVI 130
Query: 176 NKIDK 180
NKID+
Sbjct: 131 NKIDR 135
>gi|387891176|ref|YP_006321474.1| putative GTP-binding protein TypA/BipA [Escherichia blattae DSM 4481]
gi|414594478|ref|ZP_11444114.1| GTP-binding protein TypA [Escherichia blattae NBRC 105725]
gi|386926009|gb|AFJ48963.1| putative GTP-binding protein TypA/BipA [Escherichia blattae DSM 4481]
gi|403194473|dbj|GAB81766.1| GTP-binding protein TypA [Escherichia blattae NBRC 105725]
Length = 606
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERSELTERVMDSNDLEKERGITILAKNTAINWRDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K+V + N P Q+QI L+Y++Y+G IGIGRI G +K Q V I++ ++ N
Sbjct: 189 TIVKHVEAPNVDLNGPFQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVTIIDAEGNRRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + GL R+ A +GDI+ ITG+ E+ I TICDP LP L +DEPT+
Sbjct: 249 -GKVGTVLGHMGLQRIESASAEAGDIIAITGLGELNISDTICDPQNVEALPALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDPDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+ ++G EP+E + +D+EE NQG +M+ L R G+L
Sbjct: 367 SVLIENMRREGFEMAVSRPKVIFREIDGRRQEPFEQVTLDVEEQNQGSVMEALGLRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 RDMMPDGKGRVRLDYIIPSRGLIGFRTEFMTMTSGTGLLYASFSHYDDL---RPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L IK+TLE A+EFI+DDELVE+TP++IRLRKR L EN+R++
Sbjct: 544 TNMRASGTDEATTLSPCIKMTLEQALEFIDDDELVEVTPQSIRLRKRHLTENDRRR 599
Score = 70.9 bits (172), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E +T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERSELTERVMDSNDLEKERGITILAKNTAINWRD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|384226229|ref|YP_005617392.1| GTP-binding protein BipA [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311086736|gb|ADP66817.1| GTP-binding protein BipA [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 607
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF +++ RIMDSN++EKERGITI SKN SI++N
Sbjct: 9 AIIAHVDHGKTTLLDKLLQQSGTFEEHEEKTERIMDSNDLEKERGITILSKNTSIKWNNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA K G PIVV+N
Sbjct: 69 KINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ++RP+WVVD FDLF L A++EQLDFP+IYTSA+ G + + Q NMIPL+E
Sbjct: 129 KIDRIHSRPDWVVDQVFDLFVNLNASDEQLDFPIIYTSAVLGTSGTDYLNMQNNMIPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+KY P NS+ Q+QI L+Y+SYLG IG+GR+ G IK+ V I++ K
Sbjct: 189 SIIKYAPAPNVNSDQKFQMQISQLDYNSYLGVIGVGRVKQGSIKTNDKVTIID-RFGKHR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+N++ + GL R+ +N+ +GDI+ ITG++++ I TIC P LP L+IDEPT+
Sbjct: 248 SGKVNKVLNYFGLKRMEINQGYAGDIIAITGLDKLKISDTICHPDNLQPLPALSIDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP +G+EGK+IT+RQI RL E +N+ L++ + K D +I+ VSGRGELHL
Sbjct: 308 NMFFSVNTSPFSGKEGKYITSRQILERLKKETMHNVALQIKETK-DPNIFSVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL VSRP++IF+ +NG EP+EN+ +DIEE NQG +MQ + R G+L
Sbjct: 367 SILIENMRREGFELEVSRPKIIFREINGIQKEPFENVTLDIEEKNQGSVMQFIGIRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRLEY + SR LIGF++EF+++T GTGL F Y N ++G+R
Sbjct: 427 KNMIPDSKGRVRLEYILSSRALIGFRSEFMSITSGTGLCYSSFSHYDNLQNS---NIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +G AV +SL+ LQ+RG+LFI H VYEG IIG+H+R NDL VN + K+L
Sbjct: 484 KNGVLISNSTGMAVGFSLFNLQERGKLFIGHGAQVYEGQIIGLHNRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L + I TLE AI FINDDELVE+TP +IR+RK +LKENERK+
Sbjct: 544 TNMRASGTDEAIVLTTAIHFTLEEAIGFINDDELVEVTPHSIRIRKFYLKENERKR 599
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 112/243 (46%), Gaps = 30/243 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+LLD + + + F E T+ I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLLDKLLQQSGTFEEHEEKTERIMDSNDLEKERGITILSKNTSIKWNN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YKINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPIVVI 127
Query: 176 NKIDKL----DINLDRIKQDLISEQVIPEEYGGASPFISISAKTGV-GINKL-LEN--IS 227
NKID++ D +D++ ++ E+ P I SA G G + L ++N I
Sbjct: 128 NKIDRIHSRPDWVVDQVFDLFVNLNASDEQL--DFPIIYTSAVLGTSGTDYLNMQNNMIP 185
Query: 228 LQAEILELK-AP-VTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCSDIVVAGASYGR 283
L I++ AP V + K + S+LD G + ++ G+++ +D V +G+
Sbjct: 186 LYESIIKYAPAPNVNSDQKFQMQISQLDYNSYLGVIGVGRVKQGSIKTNDKVTIIDRFGK 245
Query: 284 IRS 286
RS
Sbjct: 246 HRS 248
>gi|407694455|ref|YP_006819243.1| membrane GTPase [Alcanivorax dieselolei B5]
gi|407251793|gb|AFT68900.1| putative membrane GTPase involved in stress response [Alcanivorax
dieselolei B5]
Length = 602
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/596 (55%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN++EKERGITI SKN +++Y
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGDRAGDVERVMDSNDLEKERGITILSKNTALKYGDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAAGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A++EQLDFPV+Y SAL+G A + +M PLF+
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGASDEQLDFPVVYASALNGIAGQEPDQMAEDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ VP + +++ P Q+QI SL+Y+SYLG IGIGRI G++K+ V I++ + K
Sbjct: 189 TIIDRVPAPEVDADGPFQMQISSLDYNSYLGVIGIGRIKRGQVKANSQVKIID-REGKVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I QI GL+RV V+EA +GDIV +TG++ + I T+CDP+ LP L +DEPT+
Sbjct: 248 NGRILQIMGHHGLERVDVSEAGAGDIVCVTGMDPLDISDTLCDPNNVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AG++GKF+T+RQI+ RL+ E+K+N+ LRV + D + VSGRGELHL
Sbjct: 308 SMVFHVNTSPFAGQDGKFVTSRQIRERLEAELKHNVALRVEETGSADQ-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+V RP+VI + ++G+ EPYEN+ D+EE +QG IM+ L R ++
Sbjct: 367 SVLIENMRREGFELAVGRPQVIVREVDGQKQEPYENVMADVEEQHQGAIMEHLGLRRAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K RVRL + +PSRGLIGF++ F+TLT GTG+++ F Y + D+ +R
Sbjct: 427 TNMEPDGKGRVRLTFVVPSRGLIGFRSLFLTLTSGTGILNSTFSHYGEY---KPGDMAQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S GK +A++L+ LQ+RGR+ I+ N VYEG +IGIHSR NDL+VNP K KQL
Sbjct: 484 NNGVLVSMVKGKVLAFALFNLQERGRMLIDPNVEVYEGQLIGIHSRGNDLVVNPTKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DE + L P++ +LE A++FI DDELVE+TP +RLRK+ L E ERK+
Sbjct: 544 TNMRASGTDENVILTPPVRFSLEQALDFIEDDELVEVTPHYLRLRKKLLTETERKR 599
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGDRAGDVERVMDSNDLEKERGITILSKNTALKYGD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAAGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|359782335|ref|ZP_09285556.1| GTP-binding protein TypA [Pseudomonas psychrotolerans L19]
gi|359369602|gb|EHK70172.1| GTP-binding protein TypA [Pseudomonas psychrotolerans L19]
Length = 605
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLR SGT + + N R+MDSN+ EKERGITI +KN ++++
Sbjct: 9 AIIAHVDHGKTTLVDKLLRLSGTLDRKEAENERVMDSNDQEKERGITILAKNTALKWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHEKMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + + P Q+QI L+Y+S+LG IGIGRI GRIK+ VV ++ K N
Sbjct: 189 AIVDHVPAPQVDLDGPFQMQISQLDYNSFLGVIGIGRIARGRIKANTPVVAISDDGSKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G++E+ I T+CDP P L +D+PT+
Sbjct: 249 -GRILKIMGHSGLQRVEVAEAEAGDIVCVSGMDELFISDTLCDPQNVEARPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AGREGKF+T+R IK+RLD E+ +N+ LRV + + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGREGKFVTSRNIKDRLDKELLHNVALRVEPGESAEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++V RP V+ +GE EPYEN+ +DIEE +QG +M+++ R GDL
Sbjct: 367 SVLIENMRREGFEMAVGRPEVVIIEKDGEKQEPYENVTIDIEEQHQGSVMEQMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RLEY IP+RGLIGF+N F+TLT G+G+++ F Y P ++ R
Sbjct: 427 TNMIPDGKGRIRLEYTIPARGLIGFRNNFLTLTSGSGILTSTFSHYGPI---KAGEVSNR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+L
Sbjct: 484 QNGVLVSMATGTALTYSLETLQSRGKLFLAPGDEIYEGQLCGINSRDNDLVLNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
N+R+SG DE I L+ PIK TLE A+EFI DDELVE+TPK+IRLRK+FL EN+RK+
Sbjct: 544 DNMRASGKDEVIALVPPIKFTLEQALEFIADDELVEVTPKSIRLRKKFLNENDRKR 599
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRLSGTLDRKEAENERVMDSNDQEKERGITILAKNTALKWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|294634256|ref|ZP_06712798.1| GTP-binding protein TypA/BipA [Edwardsiella tarda ATCC 23685]
gi|451967440|ref|ZP_21920682.1| GTP-binding protein TypA [Edwardsiella tarda NBRC 105688]
gi|291092296|gb|EFE24857.1| GTP-binding protein TypA/BipA [Edwardsiella tarda ATCC 23685]
gi|451313761|dbj|GAC66044.1| GTP-binding protein TypA [Edwardsiella tarda NBRC 105688]
Length = 606
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + + R+MDSN++EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGERNDATERVMDSNDLEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL G A + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALQGIAGLDHADMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + N
Sbjct: 189 AIVEHVAAPDVDLDGSFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIVDSEGKRRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI Q+ GL R+ + A +GDIV +TG+ ++ I T+CDP+ LP L +DEPT+
Sbjct: 249 -GKIGQVLGHLGLQRIETDVAEAGDIVAVTGLGDLNISDTLCDPNNVEALPALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI RL E+ +N+ LRV + D+ + VSGRGELHL
Sbjct: 308 SMYFCVNTSPFCGKEGKFVTSRQILERLQKELVHNVALRVEETPDPDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL+VSRP+VI++ ++G + EP+E + +DIEE +QG +M+ L R G++
Sbjct: 367 SVLIENMRREGYELAVSRPKVIYREIDGRMQEPFEQVTLDIEEQHQGSVMEALGIRKGEI 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ +F+T+T GTGL+ F Y + ++G+R
Sbjct: 427 RDMSPDGKGRVRLDYIIPSRGLIGFRTDFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK+TLE A+EFI+DDELVE+TP ++RLRKR L EN+R++
Sbjct: 544 TNMRASGTDEATTLSPPIKMTLEQALEFIDDDELVEVTPHSVRLRKRHLTENDRRR 599
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGERNDATERVMDSNDLEKERGITILAKNTAINWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|94500418|ref|ZP_01306950.1| predicted membrane GTPase involved in stress response [Bermanella
marisrubri]
gi|94427453|gb|EAT12431.1| predicted membrane GTPase involved in stress response [Oceanobacter
sp. RED65]
Length = 607
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/596 (54%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + + R+MDSN+ EKERGITI SKN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLEQSGTLDRKEQGGERMMDSNDQEKERGITILSKNTAIKWGEY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
R+NI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G +PIVV+N
Sbjct: 69 RVNIVDTPGHADFGGEVERVMSMVDSVLLIVDAQDGPMPQTRFVTQKAFDRGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD+L ATEEQLDFPV+Y SAL+G A + +M LF+
Sbjct: 129 KIDRPGARPDWVMDEVFDLFDRLGATEEQLDFPVVYASALNGIAGNDPDEMGEDMGALFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++VP + Q+Q+ SL+Y Y G IGIGRI G +K+ Q V +++ D K
Sbjct: 189 AIIEHVPAPDVDPEGDFQMQVSSLDYDPYQGVIGIGRITRGTLKTNQPVAVID-RDGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ +++ + GL+RV+V++A +GDIV ITG+E + I T+CDP+ LP L++DEPT+
Sbjct: 248 NGRVLEVKGYHGLNRVVVDQATAGDIVCITGLETLNISDTLCDPNNVEALPKLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGK++T+R I RL+ E+ N+ LRV + + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKYVTSRNIAERLEKELITNVALRVEPGESPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+V RP V+ K ++G + EPYE + +D+EE +QG IM + R ++
Sbjct: 367 SVLIENMRREGFELAVGRPEVVQKEIDGVIQEPYEQVVIDVEEEHQGSIMSAMGDRRAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLE+ +P+RGLIGF+NEF+T+T G+G++++VF+ Y P + ++ R
Sbjct: 427 SNMVPDGKGRVRLEFMMPARGLIGFRNEFMTMTSGSGILTNVFDHYGPVKDT---EVVSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GK + Y+L+ LQ+RGRLF+ + VYEG I+G+HSRDNDL+VNP K KQL
Sbjct: 484 HNGVLVSMVAGKVLGYALFTLQERGRLFVEPSQEVYEGQIVGLHSRDNDLVVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L P+K TLE A++FI DDELVEITP++IRLRK+ L E ERK+
Sbjct: 544 TNVRASGTDEAINLTPPVKHTLEQALDFIEDDELVEITPESIRLRKKLLTETERKR 599
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS--EAGG--------------ITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + E GG IT I + N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLEQSGTLDRKEQGGERMMDSNDQEKERGIT--ILSKNTAIKW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
G + +DTPGH F R + D V+L+V A DG MPQTR A G+ IV
Sbjct: 66 GEYRVNIVDTPGHADFGGEVERVMSMVDSVLLIVDAQDGPMPQTRFVTQKAFDRGLRPIV 125
Query: 174 AINKIDK 180
INKID+
Sbjct: 126 VINKIDR 132
>gi|392542394|ref|ZP_10289531.1| GTP-binding protein TypA [Pseudoalteromonas piscicida JCM 20779]
gi|409204280|ref|ZP_11232472.1| GTP-binding protein TypA [Pseudoalteromonas flavipulchra JG1]
Length = 606
Score = 685 bits (1767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/596 (54%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT ++ R+MDSN++E+ERGITI +KN +I++N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLQQRGGNEERVMDSNDLERERGITILAKNTAIKWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF VIY SA++G+A + NM P+F+
Sbjct: 130 KIDKPGARPDWVMDQVFDLFDNLGATDEQLDFKVIYASAINGWATLDLDEPSDNMEPMFQ 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + P Q+QI L+Y+SY+G IG+GR+ G +K Q V I+ G D K
Sbjct: 190 AIVDEVEAPNADPEGPFQMQISQLDYNSYVGVIGVGRVTRGSVKPNQQVTIV-GADGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GLDR V A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 249 NGKVGQVLGYLGLDRHEVELATAGDIIAITGLGELKISDTICCQNNVEALPPLSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP +G+EGK++T+R I RL+ E+ +N+ LRV + + DS + VSGRGELHL
Sbjct: 309 TMTFSVNTSPFSGQEGKYVTSRNILERLEAELVHNVALRVEETDNPDS-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYE++VSRP VI + ++G+L EPYE + +D ++ +QG IM++L R ++
Sbjct: 368 GILIENMRREGYEIAVSRPEVILRHVDGQLEEPYETVTIDCQDEHQGSIMEQLGLRKAEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +P+RGLIGFQ EF+TLT G+GL+ H F Y P ++G+R
Sbjct: 428 TDMSPDGKGRVRMDFMMPARGLIGFQTEFMTLTSGSGLMYHTFSHYGPHKGG---NIGQR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 485 KNGVLIANAAGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P+ ++LE A+EFI+DDELVE+TP++IR+RK+ L E+ERK+
Sbjct: 545 TNVRASGTDEAQNLVPPVVMSLEQALEFIDDDELVEVTPESIRIRKKLLTESERKR 600
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLQQRGGNEERVMDSNDLERERGITILAKNTAIKWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YRINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|384227854|ref|YP_005619599.1| GTP-binding protein BipA [Buchnera aphidicola str. Ak (Acyrthosiphon
kondoi)]
gi|345538794|gb|AEO08771.1| GTP-binding protein BipA [Buchnera aphidicola str. Ak (Acyrthosiphon
kondoi)]
Length = 609
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 448/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF++++ RIMDSN++EKERGITI SKN SI++
Sbjct: 9 AIIAHVDHGKTTLLDKLLQQSGTFQEHEEKTERIMDSNDLEKERGITILSKNTSIKWKNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA K G PIVVVN
Sbjct: 69 KINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR+N+RP+WVVD FDLF L A ++QLDFP+IYTSA+ G + + Q NM+PL+E
Sbjct: 129 KIDRTNSRPDWVVDQVFDLFVDLDANDQQLDFPIIYTSAVLGTSGTDYLKMQNNMVPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+KY P N Q+Q+ L+Y++YLG IG+GRI G IK V I++ N
Sbjct: 189 SIIKYAPAPNVNPEKKFQMQVSQLDYNNYLGVIGVGRIKQGSIKPNDQVTIIDSFGKNRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+N++ + GL R+ +NE +GDI+ ITG+ ++ I TIC P LP+L++DEPT+
Sbjct: 249 -GKVNKVLNYFGLKRIEINEGNAGDIIAITGLNQLNISDTICHPDNLQALPILSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP +G+EGK+IT+RQI RL E +NI L++ + K D +I+ VSGRGELHL
Sbjct: 308 SMFFSVNTSPFSGKEGKYITSRQILERLKKETMHNIALQIKETK-DTNIFSVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL VSRP++IF+ ++G EP+EN+ +DIE+ +QG +MQ + R G+L
Sbjct: 367 SILIENMRREGFELEVSRPKIIFREIDGIKKEPFENVILDIEDQHQGSVMQFIGIRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ I+ K+RVRLEY + SR LIGF+ EF+++T GTGL F Y N ++G+R
Sbjct: 427 KNMIIDSKKRVRLEYILSSRALIGFRTEFMSITSGTGLCYSSFSHYDNLQNN---NIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +G AV +SL+ LQ+RG+LFI H VYEG IIG+H+R NDL VN + K+L
Sbjct: 484 KNGVLISNSTGMAVGFSLFNLQERGKLFIGHGAQVYEGQIIGLHNRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L + I +TLE A+ FINDDELVE+TP +IRLRK +LKEN+RKK
Sbjct: 544 TNMRASGTDEAIVLTTAINLTLEEALSFINDDELVEVTPHSIRLRKFYLKENDRKK 599
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 111/253 (43%), Gaps = 41/253 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+LLD + + + F E T+ I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLLDKLLQQSGTFQEHEEKTERIMDSNDLEKERGITILSKNTSIKWKN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV +
Sbjct: 68 YKINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPIVVV 127
Query: 176 NKIDKLDINLDRIKQDLISEQVI-------PEEYGGASPFISISA---KTGVGINKLLEN 225
NKID+ + + D + +QV + P I SA +G K+ N
Sbjct: 128 NKIDRTN-----SRPDWVVDQVFDLFVDLDANDQQLDFPIIYTSAVLGTSGTDYLKMQNN 182
Query: 226 -ISLQAEILELK-APVTTPAKGVIIE-SRLDKGK--GPVATVLIQSGTLRCSDIVVAGAS 280
+ L I++ AP P K ++ S+LD G + I+ G+++ +D V S
Sbjct: 183 MVPLYESIIKYAPAPNVNPEKKFQMQVSQLDYNNYLGVIGVGRIKQGSIKPNDQVTIIDS 242
Query: 281 YGRIRSMLNENGK 293
+G+ N NGK
Sbjct: 243 FGK-----NRNGK 250
>gi|384227288|ref|YP_005619038.1| GTP-binding protein BipA [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086164|gb|ADP66246.1| GTP-binding protein BipA [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
Length = 607
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF +++ RIMDSN++EKERGITI SKN SI++N
Sbjct: 9 AIIAHVDHGKTTLLDKLLQQSGTFEEHEEKTERIMDSNDLEKERGITILSKNTSIKWNNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA K G PIVV+N
Sbjct: 69 KINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ++RP+WVVD FDLF L A++EQLDFP+IYTSA+ G + + Q NMIPL+E
Sbjct: 129 KIDRIHSRPDWVVDQVFDLFVNLNASDEQLDFPIIYTSAVLGTSGTDYLNMQNNMIPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+KY P NS+ Q+QI L+Y+SYLG IG+GR+ G IK+ V I++ K
Sbjct: 189 SIIKYAPAPNVNSDQKFQMQISQLDYNSYLGVIGVGRVKQGSIKTNDKVTIID-RFGKHR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+N++ + GL R+ +N+ +GDI+ ITG+ ++ I TIC P LP L+IDEPT+
Sbjct: 248 SGKVNKVLNYFGLKRMEINQGYAGDIIAITGLNKLKISDTICHPDNIQPLPALSIDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP +G+EGK+IT+RQI RL E +N+ L++ + K D +I+ VSGRGELHL
Sbjct: 308 NMFFSVNTSPFSGKEGKYITSRQILERLKKETMHNVALQIKETK-DPNIFSVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL VSRP++IF+ +NG EP+EN+ +DIEE NQG +MQ + R G+L
Sbjct: 367 SILIENMRREGFELEVSRPKIIFREINGIQKEPFENVTLDIEEKNQGSVMQFIGIRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRLEY + SR LIGF++EF+++T GTGL F Y N ++G+R
Sbjct: 427 KNMIPDSKGRVRLEYILSSRALIGFRSEFMSITSGTGLCYSSFSHYDNLQNS---NIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +G AV +SL+ LQ+RG+LFI H VYEG IIG+H+R NDL VN + K+L
Sbjct: 484 KNGVLISNSTGMAVGFSLFNLQERGKLFIGHGAQVYEGQIIGLHNRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L + I TLE AI FINDDELVE+TP +IR+RK +LKENERK+
Sbjct: 544 TNMRASGTDEAIVLTTAIHFTLEEAIGFINDDELVEVTPHSIRIRKFYLKENERKR 599
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 112/243 (46%), Gaps = 30/243 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+LLD + + + F E T+ I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLLDKLLQQSGTFEEHEEKTERIMDSNDLEKERGITILSKNTSIKWNN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YKINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPIVVI 127
Query: 176 NKIDKL----DINLDRIKQDLISEQVIPEEYGGASPFISISAKTGV-GINKL-LEN--IS 227
NKID++ D +D++ ++ E+ P I SA G G + L ++N I
Sbjct: 128 NKIDRIHSRPDWVVDQVFDLFVNLNASDEQL--DFPIIYTSAVLGTSGTDYLNMQNNMIP 185
Query: 228 LQAEILELK-AP-VTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCSDIVVAGASYGR 283
L I++ AP V + K + S+LD G + ++ G+++ +D V +G+
Sbjct: 186 LYESIIKYAPAPNVNSDQKFQMQISQLDYNSYLGVIGVGRVKQGSIKTNDKVTIIDRFGK 245
Query: 284 IRS 286
RS
Sbjct: 246 HRS 248
>gi|417951287|ref|ZP_12594394.1| GTP-binding protein TypA/BipA [Vibrio splendidus ATCC 33789]
gi|342805239|gb|EGU40517.1| GTP-binding protein TypA/BipA [Vibrio splendidus ATCC 33789]
Length = 609
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I++N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGETEERVMDSNDIEKERGITILAKNTAIDWNDH 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A++EQLDF V+Y SAL+G+A +M PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGASDEQLDFKVVYASALNGWACLEEGETGEDMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V I++ D K
Sbjct: 193 TIVEQVAAPQVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTIVSA-DGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V++A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVDQANAGDIIAITGLGELKISDTICAQNAVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 TDMSPDGKGRVRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---EIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKA+ +L+ LQ+RGR+FI H VYEGM++GIHSRDNDL VN +K KQL
Sbjct: 488 VNGVLISNGMGKALTNALFNLQERGRMFIGHGVEVYEGMVVGIHSRDNDLTVNVLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGETEERVMDSNDIEKERGITILAKNTAIDWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 HRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|307128788|ref|YP_003880804.1| GTP-binding protein [Dickeya dadantii 3937]
gi|306526317|gb|ADM96247.1| GTP-binding protein [Dickeya dadantii 3937]
Length = 607
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN++EKERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGERNEATERVMDSNDLEKERGITILAKNTAINWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLDHNDMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + N P Q+QI L+Y++Y+G IGIGRI G +K Q V I++ + K
Sbjct: 189 AIVKHVEAPNVDLNGPFQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVSIIDS-EGKVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K++Q+ GL R+ A +GDI+ ITG+ E+ I TIC+ S LP L++DEPT+
Sbjct: 248 NGKVSQVLGHLGLQRIESTLAEAGDIIAITGLGELNISDTICETSCVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLRKELVHNVALRVEETEDPDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+T++G EP+E + VDIEE +QG +M+ L R G++
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFRTIDGRRQEPFEQVTVDIEEQHQGSVMEALGLRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ +F+T+T GTGL+ F Y ++G+R
Sbjct: 427 RDMIPDGKGRVRLDYVIPSRGLIGFRTDFMTMTSGTGLLYSTFSHYDDI---RPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIH+R NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAYALFSLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P+K+TLE A+EFI+DDELVE+TP +IRLRKR L EN+R++
Sbjct: 544 TNMRASGTDEATVLVPPVKMTLEQALEFIDDDELVEVTPTSIRLRKRHLTENDRRR 599
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGERNEATERVMDSNDLEKERGITILAKNTAINWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|452749746|ref|ZP_21949504.1| GTP-binding protein TypA [Pseudomonas stutzeri NF13]
gi|452006385|gb|EMD98659.1| GTP-binding protein TypA [Pseudomonas stutzeri NF13]
Length = 606
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/597 (55%), Positives = 442/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLR SGT + + N R+MDSN+ EKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGMDHEKMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP K + + P Q+QI L+Y+S+LG IGIGRI G IK+ V + G D K
Sbjct: 189 AIIDHVPAPKVDLDGPFQMQISQLDYNSFLGVIGIGRIARGTIKANSPVTAI-GADGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G++E+ I T+CD S LP L +D+PT+
Sbjct: 248 NGRILKIMGHSGLQRVEVQEAEAGDIVCVSGMDELYISDTLCDQSAVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RLD E+ +N+ LRV + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLDKELLHNVALRVEPGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPR-VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+EL+V RP VI + +GE EPYEN+ +DIEE +QG +M+++ R GD
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIENEDGEKQEPYENVTIDIEEQHQGPVMEQMGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRLEY IP+RGLIGF+N F+TLT G+G+++ F Y P ++
Sbjct: 427 LSNMVPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGSGILTSTFSHYGPI---KAGEVSN 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+
Sbjct: 484 RQNGVLVSMATGTALTYSLETLQARGKLFLAPGDEIYEGQLCGINSRDNDLVLNPTKGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L N+R+SG DE I L+ PIK TLE A+EFI DDELVE+TPK+IRLRK++L EN+RK+
Sbjct: 544 LDNMRASGKDEVIALVPPIKFTLEQALEFIADDELVEVTPKSIRLRKKYLNENDRKR 600
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWNG 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+I +DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|385330170|ref|YP_005884121.1| GTP-binding protein TypA [Marinobacter adhaerens HP15]
gi|311693320|gb|ADP96193.1| GTP-binding protein TypA [Marinobacter adhaerens HP15]
Length = 603
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/596 (54%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + + + R+MDSN+ EKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTLDRKELDSERVMDSNDQEKERGITILAKNTALKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD VLL++D+++GPMPQTRFVT+KA G +PIVVVN
Sbjct: 69 DINIVDTPGHADFGGEVERVMSMVDCVLLVVDSIDGPMPQTRFVTQKAFAAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD L AT+EQLDFP+++ SAL+G A + + NM +F+
Sbjct: 129 KIDRPGARPDWVVDQVFDLFDNLGATDEQLDFPIVFASALNGIAGMDHENLDDNMDAVFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+S+LG IGIGRI+ G++K+ V + G + K
Sbjct: 189 AIVDHVPAPNVDPDGPFQMQISQLDYNSFLGVIGIGRIMRGKVKTNSPVTAI-GANGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V+EA +GDIV ++G++E+ I T+CD + LP L +D+PT+
Sbjct: 248 NGRILKIMGHSGLQRVEVDEAQAGDIVCVSGMDELFISDTLCDQANVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGK++T+R IK RL+ E+ +N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKYVTSRNIKERLEKELLHNVALRVEEGDSADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRRE +EL+V RP V+ + ++G EPYE++ VDIEE +QG IM+++ R GDL
Sbjct: 367 SVLIENMRRENFELAVGRPEVVIREVDGVKQEPYESVIVDIEEQHQGPIMEQMGLRRGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RLEY IP+RGLIGF+N F+T+T GTG+++ F Y P D+ R
Sbjct: 427 TNMVPDGKGRMRLEYTIPARGLIGFRNTFLTMTSGTGILTSTFSHYGPI---KVGDVTSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV++S +G A+ YSL LQ RG+LF++ +YEG + GIHSRDNDL+VNP K K+L
Sbjct: 484 QNGVIVSMATGTALTYSLETLQSRGKLFLDPGQEIYEGQLCGIHSRDNDLVVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
N+R+SG DE I L+ PIK TLE A+EFI+DDELVE+TPK+IRLRK+ L ENERK+
Sbjct: 544 DNMRASGKDEVIGLVPPIKFTLEQALEFIDDDELVEVTPKSIRLRKKLLTENERKR 599
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTLDRKELDSERVMDSNDQEKERGITILAKNTALKWNG 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+LVV + DG MPQTR A +G+ IV +
Sbjct: 68 YDINIVDTPGHADFGGEVERVMSMVDCVLLVVDSIDGPMPQTRFVTQKAFAAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|354599755|ref|ZP_09017772.1| GTP-binding protein TypA [Brenneria sp. EniD312]
gi|353677690|gb|EHD23723.1| GTP-binding protein TypA [Brenneria sp. EniD312]
Length = 607
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHNDMADDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V K + + PLQ+QI L+Y++Y+G IGIGRI G +K Q V +++ + K
Sbjct: 189 AIVEHVESPKVDRDGPLQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVTVIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICDP+ LP L++DEPT+
Sbjct: 248 NGKVGKVLGHMGLERIEATLAEAGDIIAITGLGELNISDTICDPAAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRVIDGRNQEPFENVTLDIEEQHQGAVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGDIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP ++RLRKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPLSVRLRKRHLTENDRKR 599
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|15617032|ref|NP_240245.1| GTP-binding protein BipA [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219682339|ref|YP_002468723.1| GTP-binding protein BipA [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|414562788|ref|YP_005617979.1| GTP-binding protein BipA [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|11387177|sp|P57508.1|TYPA_BUCAI RecName: Full=GTP-binding protein TypA/BipA homolog
gi|25299746|pir||C84980 GTP-binding protein TypA/BipA [imported] - Buchnera sp. (strain APS)
gi|10039097|dbj|BAB13131.1| GTP-binding protein TypA/BipA [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622072|gb|ACL30228.1| GTP-binding protein BipA [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|311087324|gb|ADP67404.1| GTP-binding protein BipA [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 607
Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF +++ RIMDSN++EKERGITI SKN SI++N
Sbjct: 9 AIIAHVDHGKTTLLDKLLQQSGTFEEHEEKTERIMDSNDLEKERGITILSKNTSIKWNNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA K G PIVV+N
Sbjct: 69 KINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ++RP+WVVD FDLF L A++EQLDFP+IYTSA+ G + + Q NMIPL+E
Sbjct: 129 KIDRIHSRPDWVVDQVFDLFVNLNASDEQLDFPIIYTSAVLGTSGTDYLNMQNNMIPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+KY P NS+ Q+QI L+Y+SYLG IG+GR+ G IK+ V I++ K
Sbjct: 189 SIIKYAPAPNVNSDQKFQMQISQLDYNSYLGVIGVGRVKQGSIKTNDKVTIID-RFGKHR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+N++ + GL R+ +N+ +GDI+ ITG+ ++ I TIC P LP L+IDEPT+
Sbjct: 248 SGKVNKVLNYFGLKRMEINQGYAGDIIAITGLNKLKISDTICHPDNLQPLPALSIDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP +G+EGK+IT+RQI RL E +N+ L++ + K D +I+ VSGRGELHL
Sbjct: 308 NMFFSVNTSPFSGKEGKYITSRQILERLKKETMHNVALQIKETK-DPNIFSVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL VSRP++IF+ +NG EP+EN+ +DIEE NQG +MQ + R G+L
Sbjct: 367 SILIENMRREGFELEVSRPKIIFREINGIQKEPFENVTLDIEEKNQGSVMQFIGIRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRLEY + SR LIGF++EF+++T GTGL F Y N ++G+R
Sbjct: 427 KNMIPDSKGRVRLEYILSSRALIGFRSEFMSITSGTGLCYSSFSHYDNLQNS---NIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +G AV +SL+ LQ+RG+LFI H VYEG IIG+H+R NDL VN + K+L
Sbjct: 484 KNGVLISNSTGMAVGFSLFNLQERGKLFIGHGAQVYEGQIIGLHNRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L + I TLE AI FINDDELVE+TP +IR+RK +LKENERK+
Sbjct: 544 TNMRASGTDEAIVLTTAIHFTLEEAIGFINDDELVEVTPHSIRIRKFYLKENERKR 599
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 112/243 (46%), Gaps = 30/243 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+LLD + + + F E T+ I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLLDKLLQQSGTFEEHEEKTERIMDSNDLEKERGITILSKNTSIKWNN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YKINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPIVVI 127
Query: 176 NKIDKL----DINLDRIKQDLISEQVIPEEYGGASPFISISAKTGV-GINKL-LEN--IS 227
NKID++ D +D++ ++ E+ P I SA G G + L ++N I
Sbjct: 128 NKIDRIHSRPDWVVDQVFDLFVNLNASDEQL--DFPIIYTSAVLGTSGTDYLNMQNNMIP 185
Query: 228 LQAEILELK-AP-VTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCSDIVVAGASYGR 283
L I++ AP V + K + S+LD G + ++ G+++ +D V +G+
Sbjct: 186 LYESIIKYAPAPNVNSDQKFQMQISQLDYNSYLGVIGVGRVKQGSIKTNDKVTIIDRFGK 245
Query: 284 IRS 286
RS
Sbjct: 246 HRS 248
>gi|257453596|ref|ZP_05618886.1| GTP-binding protein TypA/BipA [Enhydrobacter aerosaccus SK60]
gi|257449054|gb|EEV24007.1| GTP-binding protein TypA/BipA [Enhydrobacter aerosaccus SK60]
Length = 612
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/606 (54%), Positives = 446/606 (73%), Gaps = 11/606 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN +E+ERGITI +KN +I++
Sbjct: 12 AIIAHVDHGKTTLVDKLLQQSGTFGERAAEVERVMDSNALEQERGITILAKNTAIKWTNP 71
Query: 986 ------RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER++SMVD VLLL+DAV+GPMPQTRFVT KA G K
Sbjct: 72 KDGVEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDAVDGPMPQTRFVTSKAFARGLK 131
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVV+NKID+ +ARP+WV+D FDLFD L AT+EQLDFP++YTSA++G A +
Sbjct: 132 PIVVINKIDKPSARPDWVMDQVFDLFDNLGATDEQLDFPIVYTSAMNGIAGLAPDELAED 191
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLFE I+ V + +++ P ++QI SL+Y ++ G IGIGRI G +K+ V I++
Sbjct: 192 MQPLFETIVNVVEPPQVDTDGPFRMQISSLDYDNFKGLIGIGRIQRGSVKTNTPVTIVDK 251
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+K N +I QI + GLDR+ V A +GDIV ITGI+ + I TICDP LP L+
Sbjct: 252 EGNKRN-GRILQIMGYHGLDRIEVPMAQAGDIVCITGIDALNISDTICDPQNVEALPALS 310
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPT+++ F VNNSP AG+EGKF+T+R I+ RL+ E+ +N+ LRV D ++VSG
Sbjct: 311 VDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLERELIHNVALRVEDTDSPDK-FKVSG 369
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RGELHL++LIENMRREG+EL VSRP VI + + GE EP+EN+ D+EE +QG +M+++
Sbjct: 370 RGELHLSVLIENMRREGFELGVSRPEVIVREIEGEKQEPFENVIFDVEEQHQGAVMEQMG 429
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
YR G+L N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y P
Sbjct: 430 YRKGELTNMEVDGKGRIRIEAVVPSRGLIGFRSEFLTITSGTGIMTSSFSHYGPVKTG-- 487
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
D+ KR+NGVLIS +G + Y+L+ LQ+RGR+F++ VYEGMI+G +SR +D++VNP
Sbjct: 488 -DVAKRQNGVLISMVNGTVLGYALFNLQERGRMFVSPQTEVYEGMIVGQNSRSDDMVVNP 546
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
K KQLTN+R+SG+D+AI L PI TLE A+EFI DDELVE+TPK+IRLRK++L ENER
Sbjct: 547 TKAKQLTNVRASGTDDAIILTPPIIFTLEQALEFIEDDELVEVTPKSIRLRKKYLTENER 606
Query: 1520 KKKLHK 1525
K+ K
Sbjct: 607 KRNGRK 612
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E + + N + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDKLLQQSGTFGERAAEVERVMDSNALEQERGITILAKNTAIKWTN 70
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V A DG MPQTR + A G+
Sbjct: 71 PKDGVEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDAVDGPMPQTRFVTSKAFARGL 130
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INKIDK D +
Sbjct: 131 KPIVVINKIDKPSARPDWV 149
>gi|358448550|ref|ZP_09159053.1| GTP-binding protein TypA [Marinobacter manganoxydans MnI7-9]
gi|357227338|gb|EHJ05800.1| GTP-binding protein TypA [Marinobacter manganoxydans MnI7-9]
Length = 603
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/596 (54%), Positives = 441/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + + + R+MDSN+ EKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDQLLRQSGTLDRKELDSERVMDSNDQEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD VLL++D+++GPMPQTRFVT+KA G +PIVVVN
Sbjct: 69 DINIVDTPGHADFGGEVERVMSMVDCVLLVVDSIDGPMPQTRFVTQKAFAAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD L AT+EQLDFP+++ SAL+G A + + NM +F+
Sbjct: 129 KIDRPGARPDWVVDQVFDLFDNLGATDEQLDFPIVFASALNGIAGMDHENLDDNMDAVFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+S+LG IGIGRI+ G++K+ V + G + K
Sbjct: 189 AIVDHVPAPNVDPDGPFQMQISQLDYNSFLGVIGIGRIMRGKVKTNSPVTAI-GANGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G++E+ I T+CD + LP L +DEPT+
Sbjct: 248 NGRILKIMGHSGLQRVEVEEAQAGDIVCVSGMDELFISDTLCDQANVEALPALTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGK++T+R IK RL+ E+ +N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKYVTSRNIKERLEKELLHNVALRVEEGDSADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRRE +EL+V RP V+ + ++G EPYEN+ VDIEE +QG +M+++ R GDL
Sbjct: 367 SVLIENMRRENFELAVGRPEVVIREVDGVKQEPYENVIVDIEEQHQGAVMEQMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RL+Y IP+RGLIGF+N F+T+T GTG+++ F Y P D+ R
Sbjct: 427 TNMVPDGKGRMRLDYTIPARGLIGFRNTFLTMTSGTGILTSTFSHYGPI---KVGDVTSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV++S +G A YSL LQ RG+LF++ +YEG + GIHSRDNDL+VNP K K+L
Sbjct: 484 QNGVIVSMATGTAFTYSLETLQSRGKLFLDPGQEIYEGQLCGIHSRDNDLVVNPTKAKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
N+R+SG DE I L+ PIK TLE A+EFI+DDELVE+TPK+IRLRK+ L ENERK+
Sbjct: 544 DNMRASGKDEVIGLVPPIKFTLEQALEFIDDDELVEVTPKSIRLRKKLLTENERKR 599
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDQLLRQSGTLDRKELDSERVMDSNDQEKERGITILAKNTALKWND 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+LVV + DG MPQTR A +G+ IV +
Sbjct: 68 YDINIVDTPGHADFGGEVERVMSMVDCVLLVVDSIDGPMPQTRFVTQKAFAAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|406597935|ref|YP_006749065.1| BipA protein [Alteromonas macleodii ATCC 27126]
gi|407684948|ref|YP_006800122.1| BipA protein [Alteromonas macleodii str. 'English Channel 673']
gi|407688883|ref|YP_006804056.1| BipA protein [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|406375256|gb|AFS38511.1| BipA protein [Alteromonas macleodii ATCC 27126]
gi|407246559|gb|AFT75745.1| BipA protein [Alteromonas macleodii str. 'English Channel 673']
gi|407292263|gb|AFT96575.1| BipA protein [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 610
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 436/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEQEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ ++ ++ +M LF+
Sbjct: 133 KIDKPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWASLDADTKEDDMTALFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + Q+QI L+Y+SY+G IG+GR+ G +K Q V ++ D K
Sbjct: 193 TIVDQVSPPDADIDGAFQMQISQLDYNSYVGVIGVGRVKRGSVKPNQQVTVVTA-DGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL R V A +GDI+ ITG+ E+ I TICD + LP L +DEPT+
Sbjct: 252 NGKVGLVYGYLGLARHEVESAHAGDIIAITGLGELKISDTICDINTVEALPPLTVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKYVTSRNILERLKDELVHNVALRVEEMPDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI K ++G EPYE L +D EE +QG IM++L R ++
Sbjct: 371 GILIENMRREGYELAVSRPEVILKEVDGATQEPYETLTIDCEEQHQGSIMEQLGLRKAEM 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ IPSRGLIGFQ EF+TLT G+GL+ H F+ Y P+ +GKR
Sbjct: 431 TDMSPDGKGRVRIDFIIPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPYKGGI---IGKR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 KNGVLIANANGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PI+++LE A+EFI+DDELVE+TP++IR+RK+ L ENERK+
Sbjct: 548 TNVRASGTDEAQTLVPPIRMSLEQALEFIDDDELVEVTPESIRIRKKLLTENERKR 603
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEQEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 131
Query: 176 NKIDK 180
NKIDK
Sbjct: 132 NKIDK 136
>gi|254507314|ref|ZP_05119450.1| GTP-binding protein TypA/BipA [Vibrio parahaemolyticus 16]
gi|219549774|gb|EED26763.1| GTP-binding protein TypA/BipA [Vibrio parahaemolyticus 16]
Length = 609
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 438/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A+ NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDDQLDFKVVYASALNGWASLEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V ++ G D K
Sbjct: 193 TIVDVVDAPNVDLEGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVTVI-GADGKTR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TIC + LP L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLERHEVEQANAGDIIAITGLGELKISDTICAQNAVEALPALSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQLMEPFETVTIDVMEEHQGGIMENIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P ++G+R
Sbjct: 431 TDMSPDGKGRVRMDFIMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---EIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKA+ +L+ LQ+RGR+FI H VYEGM++GIHSRDNDL VN +K KQL
Sbjct: 488 INGVLISNGMGKALTNALFNLQERGRMFIGHGVEVYEGMVVGIHSRDNDLTVNVLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI +TLE A+EFI+DDELVE+TP++IR+RK+FL E++RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIVMTLEQALEFIDDDELVEVTPESIRIRKKFLTESDRKR 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|240947932|ref|ZP_04752362.1| GTP-binding protein/membrane GTPase involved in stress response
[Actinobacillus minor NM305]
gi|240297762|gb|EER48215.1| GTP-binding protein/membrane GTPase involved in stress response
[Actinobacillus minor NM305]
Length = 615
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 444/596 (74%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+ SGT ++ +++ R+MDSN++EKERGITI +KN +I +NG
Sbjct: 13 AIIAHVDHGKTTLVDKLLKLSGTLDTSRGDVDERVMDSNDLEKERGITILAKNTAINWNG 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + NM PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLDHEDLAPNMDPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V + P Q+QI L+YS YLG IGIGRI G +K Q V I++ + K
Sbjct: 193 EAIIKHVSPPDVELDAPFQMQISQLDYSKYLGVIGIGRIKRGTVKPNQPVTIIDS-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+I Q+ GL R EA +GDI+ ITG+ E+ I T+CD + LP L++DEPT
Sbjct: 252 RNGRIGQVLGHLGLQRYEATEAYAGDIIAITGLGELNISDTLCDINNVEALPALSVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGKF+T+RQI RL E+ +N+ LRV + D ++ VSGRGELH
Sbjct: 312 VTMFFCVNTSPFAGQEGKFVTSRQILERLKKELVHNVALRVEETD-DSDVFSVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIFKEIDGRKQEPFEQVTIDIEEQHQGSVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+NEF+T+T GTGLI F Y + ++G+
Sbjct: 431 VRDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLIYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS +GKA+AYSL+ LQDRG+L I+H +YEG +IGIHSR NDL VN ++ K+
Sbjct: 488 RINGVLISNGTGKALAYSLYALQDRGKLMIDHGVEIYEGQVIGIHSRSNDLTVNALEGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
LTN+R+SG D+A+ L +P+++TLE A+EFI+DDELVE+TP ++R+RK+ L E ERK
Sbjct: 548 LTNMRASGKDDALTLTTPVRMTLEQALEFIDDDELVEVTPASVRVRKKLLTEVERK 603
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRK-TNVVFSEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + K + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLKLSGTLDTSRGDVDERVMDSNDLEKERGITILAKNTAINWN 71
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 GYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|38372576|sp|Q89AC9.2|TYPA_BUCBP RecName: Full=GTP-binding protein TypA/BipA homolog
Length = 611
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/596 (58%), Positives = 439/596 (73%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF+K++ + RIMDSN++EKERGITI +KN +I++
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTFKKHEEFSERIMDSNDLEKERGITILAKNTAIQWKKY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINIIDTPGHADFGGEVERILSMVD+VLL++DA+EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIIDTPGHADFGGEVERILSMVDSVLLVVDALEGPMPQTRFVTQKAFSYGIKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +ARP WV+D FDLF L AT+EQLDFP IYTSAL G + + +MIPL+
Sbjct: 133 KIDRKHARPNWVIDQIFDLFVNLNATDEQLDFPTIYTSALLGTSGVSYNHMNPDMIPLYN 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KY P N P Q+QI L+Y +YLG IGIGRI G + S Q + I+N + K
Sbjct: 193 AIVKYTPPPTVYPNCPFQMQISQLDYDNYLGIIGIGRINKGSVTSNQSISIINNTEVK-R 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI +I + GL+++ +NEA SGDI+ ITGI+++ I TICDP + LPML IDEPT+
Sbjct: 252 TGKIGKILQYLGLNKIEINEAQSGDIIAITGIDKLNISDTICDPQYISALPMLKIDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP +G EGK+IT+RQI NRL E N+ L++ + +D + + VSGRGELHL
Sbjct: 312 EMLFSVNKSPFSGTEGKYITSRQIFNRLKKEENYNVALKIKET-NDTNTFSVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL VSRP+VI KT+N + EP E + +DIE QG IM+ + R G +
Sbjct: 371 SILIENMRREGFELEVSRPQVILKTINELIQEPMETVVLDIENKYQGTIMKTIGQRKGTI 430
Query: 1346 KNIEINE-KERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
NI ++ ER RL+ I SR LIGF+ EF TLT G+GL F Y + + +
Sbjct: 431 SNITPDQNNERTRLDCIISSRSLIGFRTEFSTLTSGSGLFYSTFSHYQKIESNK---IKR 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
RNGVLI+ +G+A+ +SL+ LQ+RG+LFI H VYEG I+GIH+R NDL VN + K+
Sbjct: 488 HRNGVLIANKTGQAIGFSLFNLQNRGKLFITHGTKVYEGQIVGIHNRVNDLTVNCLSGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
LTN+R+SGSDEAI L +PIK+TLEYAI FINDDELVEITPK+IRLRKR+LKENERK
Sbjct: 548 LTNMRASGSDEAITLTTPIKMTLEYAISFINDDELVEITPKSIRLRKRYLKENERK 603
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + ++ I N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTFKKHEEFSERIMDSNDLEKERGITILAKNTAIQWKK 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A +G MPQTR A G+ IV I
Sbjct: 72 YRINIIDTPGHADFGGEVERILSMVDSVLLVVDALEGPMPQTRFVTQKAFSYGIKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|359435932|ref|ZP_09226064.1| GTP-binding protein TypA/BipA [Pseudoalteromonas sp. BSi20311]
gi|359447636|ref|ZP_09237226.1| GTP-binding protein TypA/BipA [Pseudoalteromonas sp. BSi20439]
gi|358029385|dbj|GAA62313.1| GTP-binding protein TypA/BipA [Pseudoalteromonas sp. BSi20311]
gi|358038511|dbj|GAA73475.1| GTP-binding protein TypA/BipA [Pseudoalteromonas sp. BSi20439]
Length = 607
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/596 (56%), Positives = 434/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAISWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF VIY SA++G+A + NM P+F+
Sbjct: 130 KIDKPGARPDWVMDQIFDLFDNLGATDEQLDFKVIYASAINGWATLDLDEASDNMEPMFK 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + Q+QI L+Y+SY G IGIGRI G + Q V I++ K N
Sbjct: 190 MIVDEVSPPDADPEGDFQMQISQLDYNSYKGVIGIGRIKRGSVVPNQQVTIISADGSKRN 249
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ + GL+R+ ++A +G+IV +TG+ E+ I T+C P+ LP L++DEPT+
Sbjct: 250 -GKIGSVQSYLGLERIETDKAYAGNIVTVTGLGELKISDTLCCPNNVEALPPLSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP G+EGKF+T+R I+ RLD E+ +N+ LRV + DS + VSGRGELHL
Sbjct: 309 TMTFSVNNSPFCGKEGKFVTSRNIRERLDKELVHNVALRVADTDNPDS-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI +T++G L EPYE L +D EE +QG IM+++ R G+L
Sbjct: 368 GILIENMRREGYELAVSRPEVILRTVDGVLEEPYETLTIDCEEAHQGSIMEQIGLRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R+RL++ IPSRGLIGFQ EF+TLT G+GL+ H F+ Y P +LG R
Sbjct: 428 TDMAPDGKGRMRLDFMIPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---ELGVR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+I+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 485 KNGVMIANATGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L + +LE A+EFI DDELVE+TP+NIR+RKR L ENERK+
Sbjct: 545 TNVRASGTDEAQTLTPALNYSLEQALEFIADDELVEVTPENIRIRKRHLTENERKR 600
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAISWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|407701203|ref|YP_006825990.1| BipA protein [Alteromonas macleodii str. 'Black Sea 11']
gi|407250350|gb|AFT79535.1| BipA protein [Alteromonas macleodii str. 'Black Sea 11']
Length = 610
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 436/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEQEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A+ ++ ++ +M LF+
Sbjct: 133 KIDKPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWASLDADTKEDDMTALFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + Q+QI L+Y+SY+G IG+GR+ G +K Q V ++ D K
Sbjct: 193 TIVDQVSPPDADIDGAFQMQISQLDYNSYVGVIGVGRVKRGSVKPNQQVTVVTA-DGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL R V A +GDI+ ITG+ E+ I TICD + LP L +DEPT+
Sbjct: 252 NGKVGLVYGYLGLARHEVESAHAGDIIAITGLGELKISDTICDVNTVEALPPLTVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKYVTSRNILERLKDELVHNVALRVEEMPDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI K ++G EPYE L +D EE +QG IM++L R ++
Sbjct: 371 GILIENMRREGYELAVSRPEVILKEVDGATQEPYETLTIDCEEQHQGSIMEQLGLRKAEM 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ IPSRGLIGFQ EF+T+T G+GL+ H F+ Y P+ +GKR
Sbjct: 431 TDMSPDGKGRVRIDFIIPSRGLIGFQTEFMTMTSGSGLLYHTFDHYGPYKGGI---IGKR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 KNGVLIANANGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PI+++LE A+EFI+DDELVE+TP++IR+RK+ L ENERK+
Sbjct: 548 TNVRASGTDEAQTLVPPIRMSLEQALEFIDDDELVEVTPESIRIRKKLLTENERKR 603
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEQEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 131
Query: 176 NKIDK 180
NKIDK
Sbjct: 132 NKIDK 136
>gi|261492831|ref|ZP_05989378.1| putative GTP-binding factor [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261494804|ref|ZP_05991282.1| putative GTP-binding factor [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261309515|gb|EEY10740.1| putative GTP-binding factor [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311513|gb|EEY12669.1| putative GTP-binding factor [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 630
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +NG
Sbjct: 28 AIIAHVDHGKTTLVDKLLQQSGTFGDTRGDVDERVMDSNDLEKERGITILAKNTAINWNG 87
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
INI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 88 YHINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 147
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL+
Sbjct: 148 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEELAEDMTPLY 207
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V + P Q+QI L+Y++Y+G IGIGRI G +K Q V ++ G D K
Sbjct: 208 EAIVKHVQPPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGSVKPNQAVTVV-GSDGKT 266
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R EA +GDIV ITG+ E+ I TICD + LP L++DEPT
Sbjct: 267 RQGRIGQVLGHLGLQRFEATEAFAGDIVAITGLGELNISDTICDINAVEALPALSVDEPT 326
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 327 VTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 385
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ +G+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 386 LSVLIENMRREGYELAVSRPKVIYREEDGKKQEPFEQVTIDIEEQHQGSVMEALGIRKGE 445
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 446 VRDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYD---DVKPGEIGQ 502
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 503 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRSNDLTVNCLQGKK 562
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P++ TLE A+EFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 563 LTNMRASGKDDAIVLTTPVRFTLEQALEFIDDDELVEVTPQSVRIRKRLLTENDRKR 619
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 50 ESFLLNEYNKNITAESLVRAPI--VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHI 106
ESF + K+I +++ + + I+ HVDHGKT+L+D + + + F + G + + +
Sbjct: 3 ESFYFHSIKKDIPMQNVDINKLRNIAIIAHVDHGKTTLVDKLLQQSGTFGDTRGDVDERV 62
Query: 107 GAYNVVTNHGSITFL----------------DTPGHEAFTAMRARGAKVTDIVVLVVAAD 150
N + IT L DTPGH F R + D V+LVV A
Sbjct: 63 MDSNDLEKERGITILAKNTAINWNGYHINIVDTPGHADFGGEVERVLSMVDSVLLVVDAF 122
Query: 151 DGVMPQTREAIAHAKISGVPLIVAINKIDK 180
DG MPQTR A G+ IV INK+D+
Sbjct: 123 DGPMPQTRFVTQKAFAHGLKPIVVINKVDR 152
>gi|27904865|ref|NP_777991.1| GTP-binding protein TYPA/BIPA [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|27904263|gb|AAO27096.1| GTP-binding protein TYPA/BIPA [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 616
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/597 (58%), Positives = 440/597 (73%), Gaps = 8/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF+K++ + RIMDSN++EKERGITI +KN +I++
Sbjct: 18 AIIAHVDHGKTTLVDKLLQQSGTFKKHEEFSERIMDSNDLEKERGITILAKNTAIQWKKY 77
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINIIDTPGHADFGGEVERILSMVD+VLL++DA+EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 78 RINIIDTPGHADFGGEVERILSMVDSVLLVVDALEGPMPQTRFVTQKAFSYGIKPIVVIN 137
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +ARP WV+D FDLF L AT+EQLDFP IYTSAL G + + +MIPL+
Sbjct: 138 KIDRKHARPNWVIDQIFDLFVNLNATDEQLDFPTIYTSALLGTSGVSYNHMNPDMIPLYN 197
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KY P N P Q+QI L+Y +YLG IGIGRI G + S Q + I+N + K
Sbjct: 198 AIVKYTPPPTVYPNCPFQMQISQLDYDNYLGIIGIGRINKGSVTSNQSISIINNTEVK-R 256
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI +I + GL+++ +NEA SGDI+ ITGI+++ I TICDP + LPML IDEPT+
Sbjct: 257 TGKIGKILQYLGLNKIEINEAQSGDIIAITGIDKLNISDTICDPQYISALPMLKIDEPTV 316
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP +G EGK+IT+RQI NRL E N+ L++ + +D + + VSGRGELHL
Sbjct: 317 EMLFSVNKSPFSGTEGKYITSRQIFNRLKKEENYNVALKIKET-NDTNTFSVSGRGELHL 375
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL VSRP+VI KT+N + EP E + +DIE QG IM+ + R G +
Sbjct: 376 SILIENMRREGFELEVSRPQVILKTINELIQEPMETVVLDIENKYQGTIMKTIGQRKGTI 435
Query: 1346 KNIEINE-KERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPF-YNKSKYDLG 1403
NI ++ ER RL+ I SR LIGF+ EF TLT G+GL F Y NK K
Sbjct: 436 SNITPDQNNERTRLDCIISSRSLIGFRTEFSTLTSGSGLFYSTFSHYQKIESNKIK---- 491
Query: 1404 KRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEK 1463
+ RNGVLI+ +G+A+ +SL+ LQ+RG+LFI H VYEG I+GIH+R NDL VN + K
Sbjct: 492 RHRNGVLIANKTGQAIGFSLFNLQNRGKLFITHGTKVYEGQIVGIHNRVNDLTVNCLSGK 551
Query: 1464 QLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
+LTN+R+SGSDEAI L +PIK+TLEYAI FINDDELVEITPK+IRLRKR+LKENERK
Sbjct: 552 KLTNMRASGSDEAITLTTPIKMTLEYAISFINDDELVEITPKSIRLRKRYLKENERK 608
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + ++ I N + IT L
Sbjct: 17 IAIIAHVDHGKTTLVDKLLQQSGTFKKHEEFSERIMDSNDLEKERGITILAKNTAIQWKK 76
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A +G MPQTR A G+ IV I
Sbjct: 77 YRINIIDTPGHADFGGEVERILSMVDSVLLVVDALEGPMPQTRFVTQKAFSYGIKPIVVI 136
Query: 176 NKIDK 180
NKID+
Sbjct: 137 NKIDR 141
>gi|86146583|ref|ZP_01064905.1| GTP-binding protein TypA/BipA [Vibrio sp. MED222]
gi|218708187|ref|YP_002415808.1| GTP-binding protein TypA [Vibrio splendidus LGP32]
gi|85835640|gb|EAQ53776.1| GTP-binding protein TypA/BipA [Vibrio sp. MED222]
gi|218321206|emb|CAV17156.1| GTP-binding protein typA/bipA [Vibrio splendidus LGP32]
Length = 610
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 436/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFTVVYASALNGWATMTEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A++ V + + PLQ+QI L+YSSY+G IG+ R+ G +K Q V I+N K N
Sbjct: 193 AVVDTVEAPAVDLDGPLQMQISQLDYSSYVGVIGVARVTRGSVKPNQQVTIVNAEGKKRN 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TICD + + L++DEPT+
Sbjct: 253 -GKVGTVLGYLGLERHEVEQANAGDIIAITGLGELKISDTICDVNTVEAMEPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEETESPDR-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+ EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQKMEPFETVTIDVVEEHQGAIMESIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +PSRGLIGFQ EF+T+T G+GLI H F+ Y P+ +G+R
Sbjct: 431 TDMAPDGKGRVRMDFMMPSRGLIGFQTEFLTMTSGSGLIYHSFDHYGPYKGGI---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ Y+L+ LQ RGRLF H D VYEG +IGIH+R NDL VN +K KQL
Sbjct: 488 NNGVLISNATGKALTYALFFLQARGRLFTEHADEVYEGQVIGIHNRSNDLTVNCLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK TLE A+EFI++DELVE+TP N+R+RK+ L ENERK+
Sbjct: 548 TNVRASGTDEAQVLSPPIKHTLEQALEFIDEDELVEVTPLNVRIRKKLLTENERKR 603
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|397688646|ref|YP_006525965.1| GTP-binding protein TypA [Pseudomonas stutzeri DSM 10701]
gi|395810202|gb|AFN79607.1| GTP-binding protein TypA [Pseudomonas stutzeri DSM 10701]
Length = 606
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/597 (55%), Positives = 444/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLR SGT + + N R+MDSN+ EKERGITI +KN ++++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 SINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHEKLDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+S+LG IG+GRI G++K+ V + G D K
Sbjct: 189 AIVDHVPAPVVDVDGPFQMQISQLDYNSFLGVIGVGRIKRGKVKTNTPVTAI-GTDGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +I +I GL RV V EA +GDIV ++G++E+ I T+CD + LP L +D+PT+
Sbjct: 248 QGRILKIMGHSGLQRVEVPEAEAGDIVCVSGMDELYISDTLCDQNAVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RLD E+ +N+ LRV Q + + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLDKELLHNVALRVEQGESPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPR-VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+EL+V RP VI + GE EPYEN+ +DIEE +QG +M+++ R GD
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIENEAGEKQEPYENVTIDIEEQHQGPVMEQMGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRLEY IP+RGLIGF+N F+TLT GTG+++ F Y P ++
Sbjct: 427 LTNMIPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGTGILTSTFSHYGPI---KAGEVTN 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GIHSRDNDL++NP K K+
Sbjct: 484 RQNGVLVSMATGTALTYSLETLQARGKLFLAPGDEIYEGQLCGIHSRDNDLVLNPTKGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L N+R+SG DE I L+ PIK TLE A+EFI+DDELVE+TPK+IRLRK+FL EN+RK+
Sbjct: 544 LDNMRASGKDEVIALVPPIKFTLEQALEFIDDDELVEVTPKSIRLRKKFLNENDRKR 600
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWND 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
SI +DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YSINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|338999045|ref|ZP_08637700.1| GTP-binding protein TypA [Halomonas sp. TD01]
gi|338764066|gb|EGP19043.1| GTP-binding protein TypA [Halomonas sp. TD01]
Length = 608
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/605 (55%), Positives = 446/605 (73%), Gaps = 10/605 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL QSGT + RIMDSN+ EKERGITI +KN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERIMDSNDQEKERGITILAKNTAIQWQDG 68
Query: 983 NGT--RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
NG INI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA G KP
Sbjct: 69 NGKDYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLKP 128
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
IVVVNKIDR ARP+WV+D FDLFD L A+++QLDFP+IY SAL+G A + + NM
Sbjct: 129 IVVVNKIDRPGARPDWVIDQIFDLFDNLGASDDQLDFPIIYCSALNGIAGMDPEELADNM 188
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
P+F+AI+ V + P Q+QI +L+Y+SY+G IG+GRI G +K Q + +++
Sbjct: 189 DPMFQAIVDIVEPPAVEIDGPFQMQISALDYNSYVGVIGLGRIKRGSVKPNQQISVIS-V 247
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
D K KI Q+ GL+RV EA +GDIV +TGIE++ I T+CDPS LP L++
Sbjct: 248 DGSTRKGKIGQVMTHMGLERVQTTEATAGDIVCVTGIEDLSISDTLCDPSAIEALPPLSV 307
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT+++ F VN+SP AG+EGKF+T+R IK+RL+ E+ +N+ LRV Q + + ++VSGR
Sbjct: 308 DEPTVSMTFQVNDSPFAGKEGKFVTSRNIKDRLEQELIHNVALRVEQGETPEK-FKVSGR 366
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY 1340
GELHL++LIE MRREG+EL+V RP VI K ++G EPYE + +D EE +QG IM++L Y
Sbjct: 367 GELHLSVLIETMRREGFELAVGRPEVIIKEIDGVKQEPYEEVIIDCEEQHQGSIMEELGY 426
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R G++ N+ + K RVRL++ IP+RGLIGF+ +F+TLT GTG+++ F+ Y P +
Sbjct: 427 RKGEMTNMNPDGKGRVRLDFIIPARGLIGFRGQFLTLTSGTGILTSRFDHYGPLKPDASI 486
Query: 1401 DLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPI 1460
+ RRNGVL+S GKA+AY+L+ LQ+RG+L I+H VYEGM+IGI++R ND++VNP
Sbjct: 487 E---RRNGVLVSMVGGKALAYALYALQERGKLIIDHATEVYEGMLIGINNRANDMVVNPT 543
Query: 1461 KEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
K K+L N+RS+G+DE I L PIK TLE AIEF++ DELVE+TP +IRLRK+ L ENERK
Sbjct: 544 KGKKLDNMRSTGNDENIVLTPPIKFTLEQAIEFLDSDELVEVTPSHIRLRKKHLTENERK 603
Query: 1521 KKLHK 1525
+ K
Sbjct: 604 RSSKK 608
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERIMDSNDQEKERGITILAKNTAIQWQD 67
Query: 122 -----------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 68 GNGKDYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLK 127
Query: 171 LIVAINKIDK 180
IV +NKID+
Sbjct: 128 PIVVVNKIDR 137
>gi|429143596|gb|AFZ77066.1| GTP-binding protein [Gilliamella apicola]
Length = 608
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/599 (56%), Positives = 443/599 (73%), Gaps = 6/599 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRK-NQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + N RIMDSN +EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLKQSGTLDNLRGDDNERIMDSNALEKERGITILAKNTAIDWND 68
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+
Sbjct: 69 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVI 128
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL G A + + +M PLF
Sbjct: 129 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALMGIAGLDHEDMAEDMTPLF 188
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + + P Q+QI L+Y++Y+G IGIGRI GR+K Q V I++ +K
Sbjct: 189 EAIVKHVEPPKVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGRVKPNQQVTIVDSEGNK- 247
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q+ GL R A +GDI+ +TG+ E+ I TICD S LP L +DEPT
Sbjct: 248 RTGKVGQVLGHLGLQRYEAEVAEAGDIIALTGLGELGISDTICDNSCVEALPPLTVDEPT 307
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN+SP AG+EGKF+T+RQI RL E+ +N+ LRV + D+ + VSGRGELH
Sbjct: 308 VTMFFNVNSSPFAGKEGKFVTSRQILERLKKELVHNVALRVEETPDPDA-FRVSGRGELH 366
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL VSRP+VIFK ++G+ EP+E + +DIEE +QG +M+ L R GD
Sbjct: 367 LSVLIENMRREGYELGVSRPKVIFKEIDGKRQEPFEQVTLDIEEQHQGSVMEALGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+
Sbjct: 427 LTNMLPDGKGRVRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQ 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGV+IS +GKA+AY+L+ LQDRG+LF+ H VYEG IIGIH+R NDL VN + K+
Sbjct: 484 RINGVMISNGTGKALAYALYSLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
LTN+R+SG+DEA L P+K++LE A+EFI+DDELVE+TP +IRLRKR L EN+RK+
Sbjct: 544 LTNMRASGTDEATTLSPPVKMSLEQALEFIDDDELVEVTPLSIRLRKRHLTENDRKRAF 602
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D ++++ + + G + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKQSGTLDNLRGDDNERIMDSNALEKERGITILAKNTAIDWN 67
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+L+V A DG MPQTR A G+ IV
Sbjct: 68 DYRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVV 127
Query: 175 INKIDK 180
INK+D+
Sbjct: 128 INKVDR 133
>gi|407069604|ref|ZP_11100442.1| GTP-binding protein TypA [Vibrio cyclitrophicus ZF14]
Length = 610
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 437/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFTVVYASALNGWATMTEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A++ V + + PLQ+QI L+YSSY+G IG+ R+ G +K Q V I+N K N
Sbjct: 193 AVVDTVEAPAVDLDGPLQMQISQLDYSSYVGVIGVARVTRGSVKPNQQVTIVNAEGKKRN 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V++A +GDI+ ITG+ E+ I TICD + + L++DEPT+
Sbjct: 253 -GKVGTVLGYLGLERHEVDQANAGDIIAITGLGELKISDTICDVNNVEAMEPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEETESPDR-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+ EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQKMEPFETVTIDVVEEHQGAIMESIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +PSRGLIGFQ EF+T+T G+GLI H F+ Y P+ +G+R
Sbjct: 431 TDMAPDGKGRVRMDFMMPSRGLIGFQTEFLTMTSGSGLIYHSFDHYGPYKGGI---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ Y+L+ LQ RGRLF H D VYEG +IGIH+R NDL VN +K KQL
Sbjct: 488 NNGVLISNATGKALTYALFFLQARGRLFTEHADEVYEGQVIGIHNRSNDLTVNCLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK TLE A+EFI++DELVE+TP N+R+RK+ L ENERK+
Sbjct: 548 TNVRASGTDEAQVLSPPIKHTLEQALEFIDEDELVEVTPLNVRIRKKLLTENERKR 603
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|419952967|ref|ZP_14469113.1| GTP-binding protein TypA [Pseudomonas stutzeri TS44]
gi|387970243|gb|EIK54522.1| GTP-binding protein TypA [Pseudomonas stutzeri TS44]
Length = 606
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/597 (55%), Positives = 443/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLR SGT + + N R+MDSN+ EKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRLSGTLDRKEAENERVMDSNDQEKERGITILAKNTALKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVVD FDLFD L AT+EQLDFP++Y SAL+G A + + + NM PLF+
Sbjct: 129 KIDRPGARPDWVVDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHENLEDNMDPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP K + + P Q+QI L+Y+S+LG IGIGRI G IK+ V + G D K
Sbjct: 189 AIIDHVPAPKVDLDGPFQMQISQLDYNSFLGVIGIGRIARGTIKANSPVTAI-GADGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G++E+ I T+CD + LP L +D+PT+
Sbjct: 248 NGRILKIMGHSGLQRVEVAEAEAGDIVCVSGMDELYISDTLCDQNAVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RL+ E+ +N+ LRV + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLEKELLHNVALRVEPGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPR-VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+EL+V RP VI + GE EPYEN+ +DIEE +QG +M+++ R GD
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIENEAGEKQEPYENVTIDIEEQHQGPVMEQMGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRLEY IP+RGLIGF+N F+TLT GTG+++ F Y P ++
Sbjct: 427 LTNMIPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGTGILTSTFSHYGPI---KAGEVSN 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+
Sbjct: 484 RQNGVLVSMATGTALTYSLETLQARGKLFLAPGDEIYEGQLCGINSRDNDLVLNPTKGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L N+R+SG DE I L+ PI+ TLE A+EFI DDELVE+TPK+IRLRK++L EN+RK+
Sbjct: 544 LDNMRASGKDEVIALVPPIRFTLEQALEFIADDELVEVTPKSIRLRKKYLNENDRKR 600
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRLSGTLDRKEAENERVMDSNDQEKERGITILAKNTALKWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|167855036|ref|ZP_02477810.1| glutaredoxin 1 [Haemophilus parasuis 29755]
gi|167853884|gb|EDS25124.1| glutaredoxin 1 [Haemophilus parasuis 29755]
Length = 615
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/597 (55%), Positives = 443/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+ SGT ++ +++ R+MDSN++EKERGITI +KN +I +NG
Sbjct: 13 AIIAHVDHGKTTLVDKLLKLSGTLDTSRGDVDERVMDSNDLEKERGITILAKNTAINWNG 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + NM PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLDHEDLAPNMDPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+ V + P Q+QI L+YS YLG IGIGRI G +K Q V +++ + K
Sbjct: 193 EAIVGQVSPPDVELDAPFQMQISQLDYSKYLGVIGIGRIKRGTVKPNQPVTVIDA-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
++ Q+ GL R EA +GDI+ ITG+ E+ I T+CD + LP L++DEPT
Sbjct: 252 RNGRVGQVLGHLGLQRYEATEAYAGDIIAITGLGELNISDTLCDINNVEALPALSVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL E+ +N+ LRV + D ++ VSGRGELH
Sbjct: 312 VTMFFCVNTSPFCGQEGKFVTSRQILERLKKELVHNVALRVEETD-DSDVFSVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIFKEIDGRKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VRDMIPDGKGRTRLEYIIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKAGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS +GKA+AYSL+ LQDRG+L I+H +YEG +IGIHSR NDL VNP++ K+
Sbjct: 488 RINGVLISNGTGKALAYSLYALQDRGKLMIDHGAEIYEGQVIGIHSRSNDLTVNPLEGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+A+ L +P+K +LE A+EFI+DDELVE+TPK++R+RK+ L E ERK+
Sbjct: 548 LTNMRASGKDDALTLTTPVKFSLEQALEFIDDDELVEVTPKSVRIRKKLLTEVERKR 604
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRK-TNVVFSEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + K + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLKLSGTLDTSRGDVDERVMDSNDLEKERGITILAKNTAINWN 71
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 GYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|429210604|ref|ZP_19201770.1| GTP-binding protein TypA [Pseudomonas sp. M1]
gi|428158018|gb|EKX04565.1| GTP-binding protein TypA [Pseudomonas sp. M1]
Length = 606
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/597 (55%), Positives = 441/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+ SGT + + + R+MDSN+ EKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLKLSGTLDRKEAESERVMDSNDQEKERGITILAKNTAIKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGMDHEKMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+S+LG IGIGRI G++KS VV ++ K N
Sbjct: 189 AIIDHVPAPVVDVDGPFQMQISQLDYNSFLGVIGIGRITRGKVKSNTPVVAVSDDGSKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G+EE+ I T+CDP LP L +D+PT+
Sbjct: 249 -GRILKIMGHSGLQRVEVPEAEAGDIVCVSGMEELFISDTLCDPQNVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK RL+ E+ +N+ LRV Q + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKERLEKELLHNVALRVEQGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPR-VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+E++V RP VI + GE EPYEN+ +DIEE +QG +M+++ R GD
Sbjct: 367 SVLIETMRREGFEMAVGRPEVVIIENEAGEKQEPYENVTIDIEEQHQGSVMEQMGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRLEY IP+RGLIGF+N F+TLT GTG+++ F Y P ++
Sbjct: 427 LSNMIPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGTGILTSTFSHYGPI---KAGEVSN 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+
Sbjct: 484 RQNGVLVSMATGTALTYSLETLQSRGKLFLGPGDEIYEGQLAGINSRDNDLVINPTKGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L N+R+SG DE I L+ PI+ TLE A+EFI DDELVE+TPK+IRLRK+ L EN+RK+
Sbjct: 544 LDNMRASGKDEVIALVPPIRFTLEQALEFIADDELVEVTPKSIRLRKKLLNENDRKR 600
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + ++ + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKLSGTLDRKEAESERVMDSNDQEKERGITILAKNTAIKWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|271502629|ref|YP_003335655.1| GTP-binding protein TypA [Dickeya dadantii Ech586]
gi|270346184|gb|ACZ78949.1| GTP-binding protein TypA [Dickeya dadantii Ech586]
Length = 607
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGERNDATERVMDSNDLEKERGITILAKNTAINWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLDHNDMAEDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K+V + + P Q+QI L+Y++Y+G IGIGRI G +K Q V I++ K
Sbjct: 189 AIVKHVEAPNVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGVVKPNQQVSIIDSA-GKVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K++Q+ GL R+ + A +GDI+ ITG+ E+ I TICD S LP L++DEPT+
Sbjct: 248 NGKVSQVLGHLGLQRIESSLAEAGDIIAITGLGELNISDTICDTSCVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLRKELVHNVALRVEETEDPDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+T++G EP+E + VDIEE +QG +M+ L R G++
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFRTIDGRRQEPFEQVTVDIEEQHQGSVMEALGLRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 RDMIPDGKGRVRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYDDI---RPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQ+RG+LF+ H VYEG IIGIH+R NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAYALFSLQERGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ P+K++LE A+EFI+DDELVE+TP +IRLRKR L EN+R++
Sbjct: 544 TNMRASGTDEATVLVPPVKMSLEQALEFIDDDELVEVTPTSIRLRKRHLTENDRRR 599
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGERNDATERVMDSNDLEKERGITILAKNTAINWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|219681784|ref|YP_002468170.1| GTP-binding protein BipA [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
gi|257471486|ref|ZP_05635485.1| GTP-binding protein BipA [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|219624627|gb|ACL30782.1| GTP-binding protein BipA [Buchnera aphidicola str. 5A (Acyrthosiphon
pisum)]
Length = 607
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/596 (56%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF +++ RIMDSN++EKERGITI SKN SI++N
Sbjct: 9 AIIAHVDHGKTTLLDKLLQQSGTFEEHEEKTERIMDSNDLEKERGITILSKNTSIKWNNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA K G PIVV+N
Sbjct: 69 KINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ++RP+WVVD FDLF L A++EQLDFP+IYTSA+ G + + Q NMIPL+E
Sbjct: 129 KIDRIHSRPDWVVDQVFDLFVNLNASDEQLDFPIIYTSAVLGTSGTDYLNMQNNMIPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+KY P NS+ Q+QI L+Y+SYLG IG+GR+ G IK+ V I++ K
Sbjct: 189 SIIKYAPAPNVNSDQKFQMQISQLDYNSYLGVIGVGRVKQGSIKTNDKVTIID-RFGKHR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+N++ + GL R+ +N+ +GDI+ ITG+ ++ I TIC P LP L+IDEPT+
Sbjct: 248 SGKVNKVLNYFGLKRMEINQGYAGDIIAITGLNKLKISDTICHPDNLQPLPALSIDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP +G EGK+IT+RQI RL E +N+ L++ + K D +I+ VSGRGELHL
Sbjct: 308 NMFFSVNTSPFSGNEGKYITSRQILERLKKETMHNVALQIKETK-DPNIFSVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL VSRP++IF+ +NG EP+EN+ +DIEE NQG +MQ + R G+L
Sbjct: 367 SILIENMRREGFELEVSRPKIIFREINGIQKEPFENVTLDIEEKNQGSVMQFIGIRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRLEY + SR LIGF++EF+++T GTGL F Y N ++G+R
Sbjct: 427 KNMIPDSKGRVRLEYILSSRALIGFRSEFMSITSGTGLCYSSFSHYDNLQNS---NIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +G AV +SL+ LQ+RG+LFI H VYEG IIG+H+R NDL VN + K+L
Sbjct: 484 KNGVLISNSTGMAVGFSLFNLQERGKLFIGHGAQVYEGQIIGLHNRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L + I TLE AI FINDDELVE+TP +IR+RK +LKENERK+
Sbjct: 544 TNMRASGTDEAIVLTTAIHFTLEEAIGFINDDELVEVTPHSIRIRKFYLKENERKR 599
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 112/243 (46%), Gaps = 30/243 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+LLD + + + F E T+ I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLLDKLLQQSGTFEEHEEKTERIMDSNDLEKERGITILSKNTSIKWNN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YKINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTRFVTKKAFKYGLNPIVVI 127
Query: 176 NKIDKL----DINLDRIKQDLISEQVIPEEYGGASPFISISAKTGV-GINKL-LEN--IS 227
NKID++ D +D++ ++ E+ P I SA G G + L ++N I
Sbjct: 128 NKIDRIHSRPDWVVDQVFDLFVNLNASDEQL--DFPIIYTSAVLGTSGTDYLNMQNNMIP 185
Query: 228 LQAEILELK-AP-VTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCSDIVVAGASYGR 283
L I++ AP V + K + S+LD G + ++ G+++ +D V +G+
Sbjct: 186 LYESIIKYAPAPNVNSDQKFQMQISQLDYNSYLGVIGVGRVKQGSIKTNDKVTIIDRFGK 245
Query: 284 IRS 286
RS
Sbjct: 246 HRS 248
>gi|365540165|ref|ZP_09365340.1| GTP-binding protein TypA/BipA [Vibrio ordalii ATCC 33509]
Length = 607
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 444/597 (74%), Gaps = 7/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT N R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGNTEERVMDSNDIEKERGITILAKNTAINWNDF 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A N NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATLNEGEVGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K+ Q V ++ G D K
Sbjct: 193 AIVDNVESPQVDLDGPLQMQVSQLDYSSYVGVIGVCRVTRGSVKANQQVTVV-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ +TG+ E+ I TICD + + L++DEPT+
Sbjct: 252 NGKVGTVLGYLGLERNEVEQANAGDIIAVTGLGELKISDTICDQNCVEAMVPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKYVTSRNILERLQKELVHNVALRVEETDNPDR-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+ EP+E + +D+ E +QG +M+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKEEDGQKMEPFETVTIDVMEESQGGVMEKIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y ++G+R
Sbjct: 431 TNMTPDGKGRVRLDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGLHKGG---NIGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG +IGIH+R NDL VN +K KQL
Sbjct: 488 NNGVLISNATGKALTYALFNLQERGRLFTEHADEVYEGQVIGIHNRSNDLTVNCLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISP-IKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA Q++SP IK TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 548 TNVRASGTDEA-QVLSPAIKFTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 603
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGNTEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 FRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|336122642|ref|YP_004564690.1| GTP-binding protein TypA/BipA [Vibrio anguillarum 775]
gi|335340365|gb|AEH31648.1| GTP-binding protein TypA/BipA [Vibrio anguillarum 775]
Length = 635
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 444/597 (74%), Gaps = 7/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT N R+MDSN+IEKERGITI +KN +I +N
Sbjct: 41 AIIAHVDHGKTTLVDKLLQQSGTLESRGNTEERVMDSNDIEKERGITILAKNTAINWNDF 100
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 101 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 160
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A N NM PLF+
Sbjct: 161 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFKVVYASALNGWATLNEGEVGENMEPLFQ 220
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+Q+ L+YSSY+G IG+ R+ G +K+ Q V ++ G D K
Sbjct: 221 AIVDNVESPQVDLDGPLQMQVSQLDYSSYVGVIGVCRVTRGSVKANQQVTVV-GADGKKR 279
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ +TG+ E+ I TICD + + L++DEPT+
Sbjct: 280 NGKVGTVLGYLGLERNEVEQANAGDIIAVTGLGELKISDTICDQNCVEAMVPLSVDEPTV 339
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 340 TMTFQVNTSPFAGKEGKYVTSRNILERLQKELVHNVALRVEETDNPDR-FRVSGRGELHL 398
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+ EP+E + +D+ E +QG +M+K+ R G+L
Sbjct: 399 SILIENMRREGFELAVSRPEVILKEEDGQKMEPFETVTIDVMEESQGGVMEKIGLRKGEL 458
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y ++G+R
Sbjct: 459 TNMTPDGKGRVRLDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGLHKGG---NIGQR 515
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG +IGIH+R NDL VN +K KQL
Sbjct: 516 NNGVLISNATGKALTYALFNLQERGRLFTEHADEVYEGQVIGIHNRSNDLTVNCLKGKQL 575
Query: 1466 TNIRSSGSDEAIQLISP-IKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA Q++SP IK TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 576 TNVRASGTDEA-QVLSPAIKFTLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 631
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 40 IAIIAHVDHGKTTLVDKLLQQSGTLESRGNTEERVMDSNDIEKERGITILAKNTAINWND 99
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 100 FRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 159
Query: 176 NKIDK 180
NKID+
Sbjct: 160 NKIDR 164
>gi|254363057|ref|ZP_04979116.1| possible GTP-binding protein TypA [Mannheimia haemolytica PHL213]
gi|452746042|ref|ZP_21945874.1| GTP-binding protein [Mannheimia haemolytica serotype 6 str. H23]
gi|110735363|gb|ABG89252.1| putative GTP-binding factor [Mannheimia haemolytica]
gi|153094722|gb|EDN75512.1| possible GTP-binding protein TypA [Mannheimia haemolytica PHL213]
gi|452086181|gb|EME02572.1| GTP-binding protein [Mannheimia haemolytica serotype 6 str. H23]
Length = 615
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/597 (55%), Positives = 450/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + + +++ R+MDSN++EKERGITI +KN +I +NG
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTFGETRGDVDERVMDSNDLEKERGITILAKNTAINWNG 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
INI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YHINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PL+
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDLAADMTPLY 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V + + P Q+QI L+Y++Y+G IGIGRI G +K Q V I++ + K
Sbjct: 193 EAIVKHVQPPQVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSVKPNQAVTIVDS-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R EA +GDIV ITG+ E+ I TICD + LP L++DEPT
Sbjct: 252 RQGRIGQVLGHLGLQRFEATEAFAGDIVAITGLGELNISDTICDINAVEALPALSVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 312 VTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETSNPDE-FRVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ +G+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIYREEDGKKQEPFEQVTIDIEEQHQGSVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VRDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSTFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 488 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRSNDLTVNCLQGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P++ TLE A+EFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 548 LTNMRASGKDDAIVLTTPVRFTLEQALEFIDDDELVEVTPQSVRIRKRLLTENDRKR 604
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F E G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTFGETRGDVDERVMDSNDLEKERGITILAKNTAINWN 71
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 GYHINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|59801640|ref|YP_208352.1| translation initiation factor IF-2 [Neisseria gonorrhoeae FA 1090]
gi|81311174|sp|Q5F797.1|IF2_NEIG1 RecName: Full=Translation initiation factor IF-2
gi|59718535|gb|AAW89940.1| putative translation initiation factor IF-2 [Neisseria gonorrhoeae
FA 1090]
Length = 943
Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/561 (59%), Positives = 436/561 (77%), Gaps = 2/561 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK ++K LMK G MVTINQ +DQ+TA+I+V+++GH+ + +DPE+FL
Sbjct: 378 MAVKGVEMVKALMKKGMMVTINQSIDQDTALIVVKKLGHIGKPAAADDPEAFLGEGAEAE 437
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+L R P+VT+MGHVDHGKTSLLDYIR+ VV EAGGITQHIGAY+V T G ITF
Sbjct: 438 EAE-ALPRPPVVTVMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITF 496
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 497 LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDK 556
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +VIP+++GG FI +SAK G I+ LLE + L+AE+LEL APV
Sbjct: 557 DTANPERIRQELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVD 616
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+Q+GTL+ D+++AG ++G+IR+M++ENGK+I EAGP
Sbjct: 617 APAKGIIVEARLDKGRGAVATLLVQNGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGP 676
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKAREI LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 677 SIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMG 736
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + ++L +IIK DV GS E L SLK LS D+VK+ V+H+ VG I ESD+NLAIAS A
Sbjct: 737 ETQAQSLSVIIKADVQGSYEALAGSLKKLSADEVKVNVLHSGVGGITESDVNLAIASGAF 796
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRADAS+RKLA+ N+ IRY+NIIY+ I ++K+ ++ ++ EKKE + G EIRQ
Sbjct: 797 IIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEKKEQVTGTVEIRQ 856
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE 540
VI V+KV IAGC + +G+++RDS IR++RN +I TGEL SLKR+KD+VKEV+ GFEC
Sbjct: 857 VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRYKDDVKEVRMGFECG 916
Query: 541 RLSRIENQIQRDISEIIAFDI 561
+ + N+I ++ FDI
Sbjct: 917 LMLKGYNEIMEG-DQLECFDI 936
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 450 VMGHVDHGKTSLLDYIRRAKVVQGEAGGITQHI-GAYHVKTPRGVITF------------ 496
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 497 ---LDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNK 553
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 554 IDKDTANPERI 564
>gi|153206768|ref|ZP_01945609.1| GTP-binding protein TypA/BipA [Coxiella burnetii 'MSU Goat Q177']
gi|212218362|ref|YP_002305149.1| GTP-binding protein [Coxiella burnetii CbuK_Q154]
gi|120577131|gb|EAX33755.1| GTP-binding protein TypA/BipA [Coxiella burnetii 'MSU Goat Q177']
gi|212012624|gb|ACJ20004.1| GTP-binding protein [Coxiella burnetii CbuK_Q154]
Length = 602
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/596 (58%), Positives = 432/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN +E+ERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAVEGPMPQTRFVTRKA G KPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ FDLF L AT+ QLDFPV+Y SAL GYA + +M PLFE
Sbjct: 129 KIDRPGARPDWVVEQVFDLFVSLDATDAQLDFPVVYASALKGYATLDLSHPSTDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + N P Q+QI SL+YSSY+G IGIGRI G I+ V+I++ + K
Sbjct: 189 TIVSKVAPPQVDLNGPFQMQISSLDYSSYVGAIGIGRIQRGTIRRNTPVIIIDR-EGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GL RV + A +GDIV +TGIE + I T+CDP + LP L +DEPT+
Sbjct: 248 SGRVLQLLGFLGLQRVDIETAEAGDIVAVTGIENLRISDTLCDPQQVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGREGKF+T+RQIK RL+ E+ N+ LRV D + VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGREGKFLTSRQIKERLEKELIANVALRVAAGADADK-FIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYE +VSRP VI K ++ EP+ NL +DI+E +QG I+Q L R GDL
Sbjct: 367 SILIENMRREGYEFAVSRPEVIKKMVDDIECEPFVNLVLDIDEEHQGDIIQNLAKRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IP+RGLIGF + F+TLT G+G++ HVF+ YAP +S L R
Sbjct: 427 KNMMPDGKGRVRLDYLIPTRGLIGFHSHFLTLTSGSGVMYHVFDHYAPLIEES---LQTR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
GVLIS G A AY+LW LQ RG LFI VYEG+I+G HSRDNDL+VN +EKQL
Sbjct: 484 HRGVLISNSQGVATAYALWNLQSRGNLFIGPQQAVYEGIIVGQHSRDNDLVVNVCREKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L PIK +LE A++FI DDELVEITP IRLRK+ LKE+ER++
Sbjct: 544 TNIRAAGSDENIILTPPIKFSLEQALQFIADDELVEITPAAIRLRKKLLKEHERRR 599
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + +E + + N++ IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVV 127
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 128 NKIDRPG-----ARPDWVVEQV 144
>gi|384228411|ref|YP_005620146.1| GTP-binding protein BipA [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539344|gb|AEO08211.1| GTP-binding protein BipA [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 609
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/596 (56%), Positives = 451/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF+K++ RIMDSN++EKERGITI SKN SI++
Sbjct: 9 AIIAHVDHGKTTLLDQLLQQSGTFQKHEEKLERIMDSNDLEKERGITILSKNTSIKWKNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQT+FVT+KA K G PIVV+N
Sbjct: 69 KINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTQFVTKKAFKYGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR N+RP WVVD FDLF L A ++QLDFP+IYTSA+ G + +N Q NMIPL+E
Sbjct: 129 KIDRINSRPNWVVDQIFDLFVNLDANDKQLDFPIIYTSAILGSSGKNYLNMQNNMIPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++YVP N Q+QI L+Y++YLG IG+GRI G IK V I+N + N
Sbjct: 189 AIIQYVPAPDVNPEKKFQMQISQLDYNNYLGVIGVGRIKQGCIKPNDSVAIINNLGNIRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K++++ + GL R+ +NE +GDIV +TG++++ I TIC P LP LNID+PT+
Sbjct: 249 -GKVHKVLNYFGLKRIEINEGYAGDIVALTGLDKLNISDTICHPENLQALPKLNIDKPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
I F+VN SP AG+EGKFIT+R+I RL E +N+ L++ + K D +I+ VSGRGELHL
Sbjct: 308 NILFLVNTSPFAGKEGKFITSRKILERLKKETIHNVALKIKETK-DANIFSVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+E VSRP++I + +NG EPYEN+ +DI+E +QG IM+ + R G+L
Sbjct: 367 SILIENMRREGFEFQVSRPKIIVREINGCQKEPYENVTLDIDEKHQGSIMKFIGTRKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ I+ K+RVRLEY + SR LIGF++EF+++T GTGL S F Y +N ++G+R
Sbjct: 427 KNMIIDSKKRVRLEYILSSRALIGFRSEFLSMTSGTGLYSSSFSHYDIIHNS---NIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +G AV ++L+ LQ+RG+LFI H +YEG IIG+H+R NDL VN + K+L
Sbjct: 484 KNGVLISNSTGTAVGFALFNLQERGKLFIGHGTQIYEGQIIGLHNRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L + I +TLE ++ FINDDEL+E+TPK+IRLRK +LKE+ERKK
Sbjct: 544 TNMRASGTDEAIVLTTAINLTLEESLGFINDDELIEVTPKSIRLRKFYLKESERKK 599
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 110/242 (45%), Gaps = 28/242 (11%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+LLD + + + F + + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLLDQLLQQSGTFQKHEEKLERIMDSNDLEKERGITILSKNTSIKWKN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQT+ A G+ IV I
Sbjct: 68 YKINIVDTPGHADFGGEVERVMSMVDSVLLVVDALDGPMPQTQFVTKKAFKYGLNPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQVIPEEYGGAS---PFISISAKTG-VGINKL-LEN--ISL 228
NKID+++ + + D I + + + P I SA G G N L ++N I L
Sbjct: 128 NKIDRINSRPNWV-VDQIFDLFVNLDANDKQLDFPIIYTSAILGSSGKNYLNMQNNMIPL 186
Query: 229 QAEILE-LKAPVTTPAKGVIIE-SRLDKGK--GPVATVLIQSGTLRCSDIVVAGASYGRI 284
I++ + AP P K ++ S+LD G + I+ G ++ +D V + G I
Sbjct: 187 YEAIIQYVPAPDVNPEKKFQMQISQLDYNNYLGVIGVGRIKQGCIKPNDSVAIINNLGNI 246
Query: 285 RS 286
R+
Sbjct: 247 RN 248
>gi|336451044|ref|ZP_08621490.1| GTP-binding protein TypA/BipA [Idiomarina sp. A28L]
gi|336282300|gb|EGN75538.1| GTP-binding protein TypA/BipA [Idiomarina sp. A28L]
Length = 611
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/596 (56%), Positives = 434/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT RIMDSN++EKERGITI +KN +I +
Sbjct: 12 AIIAHVDHGKTTLVDKLLQQSGTLESRGEQQERIMDSNDLEKERGITILAKNTAINWGDY 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSM D+VLLL+DAV+GPMPQTRFVT+KA G PI+VVN
Sbjct: 72 HINILDTPGHADFGGEVERVLSMADSVLLLVDAVDGPMPQTRFVTQKAFSHGLNPILVVN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR AR +WVVD FDLF L AT+EQLDFP++Y SAL+G+A+ S + GNM PLFE
Sbjct: 132 KVDRPGARVDWVVDQIFDLFVNLGATDEQLDFPIVYASALNGFASLESDVQSGNMDPLFE 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V + LQLQI L+YSSYLG IGIGRI G ++ Q V ++ G D
Sbjct: 192 TIVREVAPPVAEIDGTLQLQISQLDYSSYLGVIGIGRIRRGTVRPNQQVTVV-GADGSTR 250
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ + GLDR+ V+ + +GDI ITG+ E+ I T+C + LP L +DEPT+
Sbjct: 251 SGKIGKVFGYLGLDRMEVDSSHAGDICAITGLGELKISDTVCAVGHNDPLPPLTVDEPTV 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+RQI RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 311 TMTFQVNTSPFAGKEGKYVTSRQILERLQKELVHNVALRVEETADPDK-FRVSGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+LIENMRREG+EL+VSRP VI K N EPYE L VD+EE +QG +M+ L R ++
Sbjct: 370 GVLIENMRREGFELAVSRPEVIIKYENDVKMEPYETLTVDVEEQHQGSVMEALGLRKAEM 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K R R+++ +PSRGLIGFQ EF+TLT GTGL+ H F+ Y P +G+R
Sbjct: 430 TDMQQDGKGRTRIDFIVPSRGLIGFQTEFMTLTSGTGLVYHAFDHYGPHKGGK---IGQR 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS GKA+AY+L+ +Q+RGRLF +H D VYEG IIGIH+R NDL VN +K KQL
Sbjct: 487 VNGVLISNAQGKALAYALFNIQERGRLFASHADEVYEGQIIGIHNRSNDLTVNCLKGKQL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++G+DEA+ L PI+++LE A+EFI++DELVE+TPK+IR+RK+FL ENERK+
Sbjct: 547 TNIRAAGTDEALTLTPPIRMSLERALEFIDNDELVEVTPKSIRVRKKFLTENERKR 602
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 108/248 (43%), Gaps = 40/248 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + G GIT I A N N
Sbjct: 11 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEQQERIMDSNDLEKERGIT--ILAKNTAINW 68
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
G I LDTPGH F R + D V+L+V A DG MPQTR A G+ I+
Sbjct: 69 GDYHINILDTPGHADFGGEVERVLSMADSVLLLVDAVDGPMPQTRFVTQKAFSHGLNPIL 128
Query: 174 AINKIDKLDINLDRIKQDLI---------SEQV-IPEEYGGA-SPFISISAKTGVG-INK 221
+NK+D+ +D + + EQ+ P Y A + F S+ + G ++
Sbjct: 129 VVNKVDRPGARVDWVVDQIFDLFVNLGATDEQLDFPIVYASALNGFASLESDVQSGNMDP 188
Query: 222 LLENISLQAEILELKAPVTTPAKGVIIE-SRLDKGK--GPVATVLIQSGTLRCSDIVVAG 278
L E I + E+ PV + ++ S+LD G + I+ GT+R + V
Sbjct: 189 LFETI-----VREVAPPVAEIDGTLQLQISQLDYSSYLGVIGIGRIRRGTVRPNQQVTVV 243
Query: 279 ASYGRIRS 286
+ G RS
Sbjct: 244 GADGSTRS 251
>gi|90407859|ref|ZP_01216035.1| GTP-binding protein TypA/BipA [Psychromonas sp. CNPT3]
gi|90311034|gb|EAS39143.1| GTP-binding protein TypA/BipA [Psychromonas sp. CNPT3]
Length = 608
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/597 (56%), Positives = 446/597 (74%), Gaps = 7/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +IE+NG
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLHTRGGNEERVMDSNDLEKERGITILAKNTAIEWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVERI+SMVD+V LL+DAV+GPMPQTRFVT+KA G KPIV++N
Sbjct: 70 HINIVDTPGHADFGGEVERIMSMVDSVCLLVDAVDGPMPQTRFVTQKAFAQGLKPIVIIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARPEWV+D FDLFD L AT+EQLDF VIY SAL+G+AN ++ NM LF+
Sbjct: 130 KIDKPGARPEWVMDQVFDLFDNLGATDEQLDFKVIYASALNGWANSETEEPTENMESLFQ 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V K + + Q+QI L++++Y+G IG+GRI+ G +K Q V ++ G D K
Sbjct: 190 AIVDHVEPPKGDRDGDFQMQISQLDHNAYVGVIGVGRIMRGSVKVNQQVTVI-GSDGKQR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K K+ Q+ + GL+R ++ A +G+IV I+G+ E+ I T+C P+ LP L++DEPT+
Sbjct: 249 KGKVGQVLGYLGLERYDIDIAEAGNIVAISGLGELKISDTVCAPNNVEALPPLSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP G+EGKF+T+R I +RL+ E+ +N+ L+V + D ++VSGRGELHL
Sbjct: 309 TMTFQVNNSPFCGKEGKFVTSRNILDRLNKELVHNVALKVEETGDPDK-FKVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREG+EL+VSRP VI + ++G L+EP E L VD E+ +QG IM++L R +L
Sbjct: 368 AILIENMRREGFELAVSRPEVIERMIDGVLHEPMETLTVDCEDQHQGGIMEQLGIRKAEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RL++ IPSRGLIGFQ EF+T+T G+GL+ H F+ Y P ++G+R
Sbjct: 428 TNMIPDGKGRIRLDFMIPSRGLIGFQTEFMTMTSGSGLLYHSFDHYGPHKGG---NIGQR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+ +GKAV YSL+ LQDRGRLF+ H VYEG IIG+H+R NDL VN I+ KQL
Sbjct: 485 QNGVLVCNQAGKAVTYSLFFLQDRGRLFLGHATEVYEGQIIGMHNRSNDLTVNCIRGKQL 544
Query: 1466 TNIRSSGSDEAIQLISP-IKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA Q +SP I +TLE A+EFI+ DELVE+TPK+IR+RK+ L ENERK+
Sbjct: 545 TNVRSSGTDEA-QTLSPFIDMTLEQALEFIDVDELVEVTPKSIRIRKKLLTENERKR 600
Score = 67.0 bits (162), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLHTRGGNEERVMDSNDLEKERGITILAKNTAIEWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V L+V A DG MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERIMSMVDSVCLLVDAVDGPMPQTRFVTQKAFAQGLKPIVII 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|429143600|gb|AFZ77068.1| GTP-binding protein [Gilliamella apicola]
Length = 608
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/599 (56%), Positives = 443/599 (73%), Gaps = 6/599 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRK-NQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + N RIMDSN +EKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLKQSGTLDNLRGDDNERIMDSNALEKERGITILAKNTAIDWNG 68
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+
Sbjct: 69 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVI 128
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL G A + + +M PLF
Sbjct: 129 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALMGIAGLDHENMAEDMTPLF 188
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + + P Q+QI L+Y++Y+G IGIGRI GR+K Q V I++ +K
Sbjct: 189 EAIVKHVEPPKVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGRVKPNQQVTIVDSEGNK- 247
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q+ L R A +GDI+ +TG+ E+ I TICD S LP L +DEPT
Sbjct: 248 RTGKVGQVLGHLRLQRYEAEVAEAGDIIALTGLGELGISDTICDNSCVEALPALTVDEPT 307
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN+SP AG+EGK++T+RQI RL+ E+ +N+ LRV + D+ + VSGRGELH
Sbjct: 308 VTMFFNVNSSPFAGKEGKYVTSRQILERLNKELVHNVALRVEETPDPDA-FRVSGRGELH 366
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL VSRP+VIF+ ++G+ EP+E + +DIEE +QG +M+ L R GD
Sbjct: 367 LSVLIENMRREGYELGVSRPKVIFREIDGKKQEPFEQVTLDIEEQHQGSVMEALGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+
Sbjct: 427 LTNMLPDGKGRVRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYDDI---RPGEIGQ 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGV+IS +GKA+AY+L+ LQDRG+LF+ H VYEG IIGIH+R NDL VN + K+
Sbjct: 484 RNNGVMISNGTGKALAYALYGLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
LTN+R+SG+DEA L PIK++LE A+EFI+DDELVE+TP +IRLRKR L EN+RK+
Sbjct: 544 LTNMRASGTDEATTLSPPIKMSLEQALEFIDDDELVEVTPLSIRLRKRHLTENDRKRAF 602
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D ++++ + + G + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKQSGTLDNLRGDDNERIMDSNALEKERGITILAKNTAIDWN 67
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+L+V A DG MPQTR A G+ IV
Sbjct: 68 GYRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVV 127
Query: 175 INKIDK 180
INK+D+
Sbjct: 128 INKVDR 133
>gi|307260505|ref|ZP_07542199.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306869817|gb|EFN01600.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
Length = 615
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/597 (56%), Positives = 446/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWND 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGLEHEDLAEDMTPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ +V K N P Q+QI L+Y++Y+G IGIGRI G IK Q V +++ + K
Sbjct: 193 QAIVDHVEPPKVELNAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTVTVIDS-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q+ GL R NEA +GDI+ ITG+ E+ I TICD + LP L +DEPT
Sbjct: 252 RNGKVGQVLGHLGLQRYEANEAFAGDIIAITGLGELNISDTICDINNVEALPALTVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 312 VTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ NG+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIYREENGKKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 488 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRGNDLTVNCLQGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K+TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 548 LTNMRASGKDDAIVLTTPVKMTLEQALEFIDDDELVEVTPQSIRVRKRLLTENDRKR 604
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + E G I A N N
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWN 71
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|219870341|ref|YP_002474716.1| GTP-binding protein/membrane GTPase involved in stress response
[Haemophilus parasuis SH0165]
gi|219690545|gb|ACL31768.1| GTP-binding protein/membrane GTPase involved in stress response
[Haemophilus parasuis SH0165]
Length = 615
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/597 (55%), Positives = 442/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+ SGT ++ ++ R+MDSN++EKERGITI +KN +I +NG
Sbjct: 13 AIIAHVDHGKTTLVDKLLKLSGTLDTSRGDVAERVMDSNDLEKERGITILAKNTAINWNG 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + NM PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLDHEDLAPNMDPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+ V + P Q+QI L+YS YLG IGIGRI G +K Q V +++ + K
Sbjct: 193 EAIVGQVSPPDVELDAPFQMQISQLDYSKYLGVIGIGRIKRGTVKPNQPVTVIDA-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
++ Q+ GL R EA +GDI+ ITG+ E+ I T+CD + LP L++DEPT
Sbjct: 252 RNGRVGQVLGHLGLQRYEATEAYAGDIIAITGLGELNISDTLCDINNVEALPALSVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL E+ +N+ LRV + D ++ VSGRGELH
Sbjct: 312 VTMFFCVNTSPFCGQEGKFVTSRQILERLKKELVHNVALRVEETD-DSDVFSVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIFKEIDGRKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VRDMIPDGKGRTRLEYIIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKAGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS +GKA+AYSL+ LQDRG+L I+H +YEG +IGIHSR NDL VNP++ K+
Sbjct: 488 RINGVLISNGTGKALAYSLYALQDRGKLMIDHGAEIYEGQVIGIHSRSNDLTVNPLEGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+A+ L +P+K +LE A+EFI+DDELVE+TPK++R+RK+ L E ERK+
Sbjct: 548 LTNMRASGKDDALTLTTPVKFSLEQALEFIDDDELVEVTPKSVRIRKKLLTEVERKR 604
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRK-TNVVFSEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + K + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLKLSGTLDTSRGDVAERVMDSNDLEKERGITILAKNTAINWN 71
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 GYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|119468250|ref|ZP_01611376.1| GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A)
[Alteromonadales bacterium TW-7]
gi|359448193|ref|ZP_09237739.1| GTP-binding protein TypA/BipA [Pseudoalteromonas sp. BSi20480]
gi|392539427|ref|ZP_10286564.1| GTP-binding protein [Pseudoalteromonas marina mano4]
gi|119448243|gb|EAW29507.1| GTP-binding protein TypA/BipA (Tyrosine phosphorylated protein A)
[Alteromonadales bacterium TW-7]
gi|358045943|dbj|GAA73988.1| GTP-binding protein TypA/BipA [Pseudoalteromonas sp. BSi20480]
Length = 606
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 434/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAISWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF VIY SA++G+A + NM P+F+
Sbjct: 130 KIDKPGARPDWVMDQIFDLFDNLGATDEQLDFKVIYASAINGWATLDLDEPSDNMEPMFK 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + Q+QI L+Y+SY G IGIGRI G + + Q V ++ G D
Sbjct: 190 MIVDEVSPPDADPEGDFQMQISQLDYNSYKGVIGIGRIKRGSVATNQQVTVI-GADGTTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ + GL+R+ ++A +G+IV +TG+ E+ I T+C P+ LP L++DEPT+
Sbjct: 249 NGKIGSVQSYLGLERIDTDKAYAGNIVTVTGLGELKISDTLCCPNNVEALPPLSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP G+EGKF+T+R I+ RLD E+ +N+ LRV + DS + VSGRGELHL
Sbjct: 309 TMTFSVNNSPFCGKEGKFVTSRNIRERLDKELVHNVALRVADTDNPDS-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI +T++G L EPYE L +D EE +QG IM+++ R G+L
Sbjct: 368 GILIENMRREGYELAVSRPEVILRTVDGVLEEPYETLTIDCEEEHQGSIMEQIGLRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R+R+++ IPSRGLIGFQ EF+TLT G+GL+ H F+ Y P +LG R
Sbjct: 428 TDMAPDGKGRMRMDFMIPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---ELGVR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+I+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 485 KNGVMIANATGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L + +LE A+EFI DDELVE+TP+NIR+RKR L ENERK+
Sbjct: 545 TNVRASGTDEAQTLTPHLNYSLEQALEFIADDELVEVTPENIRIRKRHLTENERKR 600
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAISWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|227113289|ref|ZP_03826945.1| GTP-binding regulatory protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|253690579|ref|YP_003019769.1| GTP-binding protein TypA [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251757157|gb|ACT15233.1| GTP-binding protein TypA [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 607
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + N P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSPPQVEMNAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDATEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVDETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRVIDGRNQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|325267086|ref|ZP_08133755.1| translation initiation factor IF2 [Kingella denitrificans ATCC
33394]
gi|324981439|gb|EGC17082.1| translation initiation factor IF2 [Kingella denitrificans ATCC
33394]
Length = 906
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/539 (60%), Positives = 435/539 (80%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK V+K LMK+G MVTINQ LDQ+TA+++VEEMGH+ + ++DP++FL + +
Sbjct: 342 MAVKGVEVVKALMKMGMMVTINQSLDQDTALLVVEEMGHIGKPAAIDDPDAFL--DEAQP 399
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ AE L R P+VT+MGHVDHGKTSLLDYIR++ VV EAGGITQHIGAY+V T G +TF
Sbjct: 400 VNAELLPRPPVVTVMGHVDHGKTSLLDYIRRSKVVAGEAGGITQHIGAYHVETPKGVVTF 459
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT EAIAHAK +GVP++VA+NKIDK
Sbjct: 460 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTVEAIAHAKAAGVPMVVAVNKIDK 519
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +RI+Q+L +V+ +E+GG F+ +SAK G+ I+KLLE + L+AE+LELKAPV
Sbjct: 520 DAANPERIRQELTQHEVVCDEWGGDVQFVDVSAKQGLNIDKLLEAVLLEAEVLELKAPVD 579
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKG+I+E+RLDKG+G VAT+L+QSGTL+ D+++AG ++G++R+ML+ENGK I EAGP
Sbjct: 580 APAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKVRAMLDENGKAIDEAGP 639
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +GE+ V+ +EKKARE+ LFRQGK+RDV+L+KQ+ K ENMFN++
Sbjct: 640 SIPVEILGLSDVPNAGEDALVLADEKKAREVALFRQGKYRDVRLAKQQAAKLENMFNNMG 699
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +NL +IIK DV GS E L SL+ LSTD+VK+ V+H+ VG I+ESD+NLAIAS A+
Sbjct: 700 ENAAQNLSVIIKADVQGSYEALAGSLQKLSTDEVKVNVLHSGVGGISESDVNLAIASGAL 759
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
IIGFNVRAD++ RKLA+ ++ IRY+NIIY+ I ++K+ ++ ++ E+KE + G EIRQ
Sbjct: 760 IIGFNVRADSAARKLAENEDVEIRYYNIIYDAIDDVKAAMSGMLSPEEKEQVTGSVEIRQ 819
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V+KV IAGC + +G+++RDS +R++RN ++ TGEL SLKRFKD+VKEV+ GFEC
Sbjct: 820 VITVSKVGNIAGCMVTDGVVKRDSHVRVIRNNVVVHTGELSSLKRFKDDVKEVRMGFEC 878
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E +G+ F
Sbjct: 413 VMGHVDHGKTSLLDYIRRSKVVAGEAGGITQHI-GAYHVETPKGVVTF------------ 459
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT A G +V VNK
Sbjct: 460 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTVEAIAHAKAAGVPMVVAVNK 516
Query: 1047 IDRSNARPEWV 1057
ID+ A PE +
Sbjct: 517 IDKDAANPERI 527
>gi|223041892|ref|ZP_03612078.1| GTP-binding protein [Actinobacillus minor 202]
gi|208435933|gb|ACI28442.1| GTP-binding protein [Actinobacillus minor 202]
Length = 615
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 444/596 (74%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+ SGT ++ +++ R+MDSN++EKERGITI +KN +I +NG
Sbjct: 13 AIIAHVDHGKTTLVDKLLKLSGTLDTSRGDVDERVMDSNDLEKERGITILAKNTAINWNG 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + NM PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLDHEDLAPNMDPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+++V + P Q+QI L+YS YLG IGIGRI G +K Q V +++ + K
Sbjct: 193 EAIIEHVSPPDVELDAPFQMQISQLDYSKYLGVIGIGRIKRGTVKPNQPVTVIDS-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+I Q+ GL R EA +GDI+ ITG+ E+ I T+CD + LP L++DEPT
Sbjct: 252 RNGRIGQVLGHLGLQRYEATEAYAGDIIAITGLGELNISDTLCDINNVEALPALSVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGKF+T+RQI RL E+ +N+ LRV + D ++ VSGRGELH
Sbjct: 312 VTMFFCVNTSPFAGQEGKFVTSRQILERLKKELVHNVALRVEETD-DSDVFSVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VIFK ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIFKEIDGRKQEPFEQVTIDIEEQHQGSVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+NEF+T+T GTGLI F Y + ++G+
Sbjct: 431 VRDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLIYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS +GKA+AYSL+ LQDRG+L I+H +YEG +IGIHSR NDL VN ++ K+
Sbjct: 488 RINGVLISNGTGKALAYSLYALQDRGKLMIDHGVEIYEGQVIGIHSRSNDLTVNALEGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
LTN+R+SG D+A+ L +P+++TLE A+EFI+DDELVE+TP ++R+RK+ L E ERK
Sbjct: 548 LTNMRASGKDDALTLTTPVRMTLEQALEFIDDDELVEVTPASVRVRKKLLTEVERK 603
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRK-TNVVFSEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + K + + + G + + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLKLSGTLDTSRGDVDERVMDSNDLEKERGITILAKNTAINWN 71
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 GYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|71281137|ref|YP_267356.1| GTP-binding protein TypA [Colwellia psychrerythraea 34H]
gi|71146877|gb|AAZ27350.1| GTP-binding protein TypA [Colwellia psychrerythraea 34H]
Length = 605
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/599 (54%), Positives = 444/599 (74%), Gaps = 9/599 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + R MDSN+IEKERGITI +KN ++ +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLEQSGTLDTRGGLEERTMDSNDIEKERGITILAKNTAVNWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
R+NI+DTPGHADFGGEVER++SMVD+VLL++DA EGPMPQTRFVT+KA G KPI+V+N
Sbjct: 69 RVNIVDTPGHADFGGEVERVMSMVDSVLLIVDAQEGPMPQTRFVTKKAFAQGLKPILVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+D+ +RP+WV+D F+LFD L AT+EQLDF V+Y SA++G+A+ +M PLF+
Sbjct: 129 KVDKPGSRPDWVMDQVFELFDNLGATDEQLDFKVVYASAINGWASLEEGVTGTDMTPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIM--NGPDDK 1163
I+K VP + Q+QI L+Y+SYLG IG+GRI G +K Q V I NG
Sbjct: 189 TIIKEVPQPIADPEGAFQMQISQLDYNSYLGVIGVGRITRGSVKPNQQVTIQLANG---G 245
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
+ AK+ ++ + GL+R+ + E +GDI+ ITG+ E+ I T+C P++ GLP L++DEP
Sbjct: 246 VHNAKVGKVFGYLGLERLDIAEGFAGDIIAITGLGELKISDTVCCPTEVEGLPALSVDEP 305
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
T+ + F VN SP G+EGK++T+R IK+RLD E+ +N+ LRV Q + D ++VSGRGEL
Sbjct: 306 TINMTFQVNTSPFCGKEGKYVTSRNIKDRLDKELIHNVALRVEQLEDADK-FKVSGRGEL 364
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGG 1343
HL ILIENMRREG+EL+VSRP VI + ++G+L EPYE + +D+EE +QG IM+K+ R
Sbjct: 365 HLGILIENMRREGFELAVSRPEVIIREIDGQLQEPYETVTIDVEEQHQGPIMEKMGVRKA 424
Query: 1344 DLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLG 1403
+L ++ + R+R+++ +PSRGLIGFQ EF+TLT G+GLI H F EY P ++G
Sbjct: 425 ELTDMAPDGTGRIRMDFIMPSRGLIGFQTEFMTLTSGSGLIYHTFFEYGPHKGG---EIG 481
Query: 1404 KRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEK 1463
+R+NGV+I +GKA+ +++ LQ RGR+ I H +YEG +IGIHSRDNDL VN +K K
Sbjct: 482 QRKNGVMIGNATGKALTNAIFNLQSRGRMLIGHGVDIYEGQVIGIHSRDNDLTVNALKGK 541
Query: 1464 QLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
QLTN+RSSG+DEA L PI ++LE A+EFI++DELVE+TP++IR+RK+FLKEN+RK++
Sbjct: 542 QLTNVRSSGTDEAQTLTPPIVMSLEQALEFIDNDELVEVTPESIRIRKKFLKENDRKRE 600
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + GG+ + N + IT L
Sbjct: 8 VAIIAHVDHGKTTLVDKLLEQSGTLDTRGGLEERTMDSNDIEKERGITILAKNTAVNWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ I+ I
Sbjct: 68 YRVNIVDTPGHADFGGEVERVMSMVDSVLLIVDAQEGPMPQTRFVTKKAFAQGLKPILVI 127
Query: 176 NKIDK 180
NK+DK
Sbjct: 128 NKVDK 132
>gi|392556832|ref|ZP_10303969.1| GTP-binding protein [Pseudoalteromonas undina NCIMB 2128]
Length = 607
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 433/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAISWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF VIY SA++G+A + NM P+F+
Sbjct: 130 KIDKPGARPDWVMDQIFDLFDNLGATDEQLDFKVIYASAINGWATLDLDEASDNMEPMFK 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + Q+QI L+Y+SY G IGIGRI G + Q V +++ D
Sbjct: 190 MIVDEVSPPDADPEGDFQMQISQLDYNSYKGVIGIGRIKRGSVAPNQQVTVISA-DGTTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ + GL+R+ ++A +G+IV +TG+ E+ I T+C P+ LP L++DEPT+
Sbjct: 249 NGKIGSVQSYLGLERIETDKAYAGNIVTVTGLGELKISDTLCCPNNVEALPPLSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP G+EGKF+T+R I+ RLD E+ +N+ LRV + DS + VSGRGELHL
Sbjct: 309 TMTFSVNNSPFCGKEGKFVTSRNIRERLDKELVHNVALRVADTDNPDS-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI +T++G L EPYE L +D EE +QG IM+++ R G+L
Sbjct: 368 GILIENMRREGYELAVSRPEVILRTVDGVLEEPYETLTIDCEEEHQGSIMEQIGLRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R+R+++ IPSRGLIGFQ EF+TLT G+GL+ H F+ Y P +LG R
Sbjct: 428 TDMAPDGKGRMRMDFMIPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---ELGVR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+I+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 485 KNGVMIANATGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L + +LE A+EFI DDELVE+TP+NIR+RKR L ENERK+
Sbjct: 545 TNVRASGTDEAQTLTPALNYSLEQALEFIADDELVEVTPENIRIRKRHLTENERKR 600
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAISWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|148976526|ref|ZP_01813222.1| GTP-binding protein TypA/BipA [Vibrionales bacterium SWAT-3]
gi|145964102|gb|EDK29359.1| GTP-binding protein TypA/BipA [Vibrionales bacterium SWAT-3]
Length = 611
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 436/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A +M PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFTVVYASALNGWATMTEGETGTDMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A++ V + + PLQ+Q+ L+YSSY+G IG+ R+ G +K Q V I+ G D K
Sbjct: 193 AVVDTVDAPAVDLDGPLQMQVSQLDYSSYVGVIGVARVTRGSVKPNQQVSII-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GLDR V +A +GDI+ ITG+ E+ I TICD + + L++DEPT+
Sbjct: 252 NGKVGTVLGYLGLDRHEVEQANAGDIIAITGLGELKISDTICDVNNVEAMTPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTDDPDR-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIF-KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
+ILIENMRREG+EL+VSRP VI K +G L EP+E + +D+ E +QG IM+ + R G+
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKKDEDGNLTEPFETVTIDVLEEHQGGIMENIGLRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L ++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G+
Sbjct: 431 LTDMSPDGKGRVRMDFMMPSRGLIGFQTEFLTLTSGSGLLYHTFDHYGPHKGGV---IGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG IIGIH+R NDL VN +K KQ
Sbjct: 488 RNNGVLISNATGKALTYALFNLQERGRLFAEHADEVYEGQIIGIHNRSNDLTVNCLKGKQ 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG+DEA L PI+ TLE A+EFI++DELVE+TP+NIR+RK+ L ENERK+
Sbjct: 548 LTNVRASGTDEAQVLSPPIRHTLEQALEFIDEDELVEVTPENIRIRKKLLTENERKR 604
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|330807047|ref|YP_004351509.1| elongation factor; GTP-binding protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|378948308|ref|YP_005205796.1| protein TypA/BipA [Pseudomonas fluorescens F113]
gi|423098005|ref|ZP_17085801.1| GTP-binding protein TypA/BipA [Pseudomonas fluorescens Q2-87]
gi|423694879|ref|ZP_17669369.1| GTP-binding protein TypA [Pseudomonas fluorescens Q8r1-96]
gi|327375155|gb|AEA66505.1| Putative elongation factor; putative GTP-binding protein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|359758322|gb|AEV60401.1| TypA/BipA [Pseudomonas fluorescens F113]
gi|388009077|gb|EIK70328.1| GTP-binding protein TypA [Pseudomonas fluorescens Q8r1-96]
gi|397888008|gb|EJL04491.1| GTP-binding protein TypA/BipA [Pseudomonas fluorescens Q2-87]
Length = 606
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/600 (54%), Positives = 440/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT +N+ + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A + A +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLDHTAMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP K + + P Q+QI +L+Y+S+LG IG+GRI GRIK VV ++ D K
Sbjct: 189 SIVDDVPAPKVDRDGPFQMQISALDYNSFLGVIGVGRIARGRIKPNTPVVAIDA-DGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL R+ V EA +GDIV I+G E++ I T+CDP + L +DEPT+
Sbjct: 248 NGRILKLMGHHGLHRIDVEEAAAGDIVCISGFEQLFISDTLCDPLNVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDSADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G +EPYEN+ +D+ E +QG IM+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIRMVDGVKHEPYENVTIDLPEESQGAIMEQMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+NEF+TLT G G+++ +F+ Y + D+ R
Sbjct: 427 TNMVPDGKGRVRLEYNIPARGLIGFRNEFLTLTSGGGILTSIFDRYDVMKSG---DMSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H +YEG I+G++SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVATGKALTYSLETLQARGKLFVEHGQDIYEGQIVGLNSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ P+K TLE A+EF+ +DEL E+TPK+IRLRK+ L E+ER + K
Sbjct: 544 DNMRASGKDETIALVPPVKFTLEQALEFVQEDELCEVTPKSIRLRKKILGESERTRAAKK 603
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|146280750|ref|YP_001170903.1| GTP-binding protein TypA [Pseudomonas stutzeri A1501]
gi|339492463|ref|YP_004712756.1| GTP-binding protein TypA [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386019046|ref|YP_005937070.1| GTP-binding protein TypA [Pseudomonas stutzeri DSM 4166]
gi|145568955|gb|ABP78061.1| GTP-binding protein TypA [Pseudomonas stutzeri A1501]
gi|327479018|gb|AEA82328.1| GTP-binding protein TypA [Pseudomonas stutzeri DSM 4166]
gi|338799835|gb|AEJ03667.1| GTP-binding protein TypA [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 606
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/597 (55%), Positives = 440/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLR SGT + + N R+MDSN+ EKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRLSGTLDRKEAENERVMDSNDQEKERGITILAKNTALKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L A++EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGASDEQLDFPIVYASALNGIAGMDHENMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP K + + P Q+QI L+Y+S+LG IGIGRI G IK+ V + G D K
Sbjct: 189 AIIDHVPAPKVDVDGPFQMQISQLDYNSFLGVIGIGRIARGTIKANSPVTAI-GADGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G++E+ I T+CD + LP L +D+PT+
Sbjct: 248 NGRILKIMGHSGLQRVEVQEATAGDIVCVSGMDELYISDTLCDQNTVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RLD E+ +N+ LRV Q + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLDKELLHNVALRVEQGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPR-VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+EL+V RP VI + GE EPYEN+ +DIEE +QG +M+++ R GD
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIENEAGEKQEPYENVTIDIEEQHQGPVMEQMGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K R+RLEY IP+RGLIGF+N F+TLT GTG+++ F Y P ++
Sbjct: 427 LTNMIPDGKGRIRLEYTIPARGLIGFRNNFLTLTSGTGILTSTFSHYGPI---KAGEVTN 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S +G A+ YSL LQ RG+LF+ +YEG + GI+SRDNDL++NP K K+
Sbjct: 484 RQNGVLVSMATGTALTYSLETLQARGKLFLEPGQDIYEGQLCGINSRDNDLVINPTKGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L N+R+SG DE I L+ PIK TLE A+EFI DDELVE+TPK+IRLRK+ L EN+RK+
Sbjct: 544 LDNMRASGKDEVIALVPPIKFTLEQALEFIADDELVEVTPKSIRLRKKMLNENDRKR 600
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRLSGTLDRKEAENERVMDSNDQEKERGITILAKNTALKWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|145637008|ref|ZP_01792672.1| aminopeptidase B [Haemophilus influenzae PittHH]
gi|145269866|gb|EDK09805.1| aminopeptidase B [Haemophilus influenzae PittHH]
Length = 616
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKYVESPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ EF+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGEFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|374314443|ref|YP_005060872.1| GTP-binding elongation factor family protein [Serratia symbiotica
str. 'Cinara cedri']
gi|363988669|gb|AEW44860.1| GTP-binding elongation factor family protein [Serratia symbiotica
str. 'Cinara cedri']
Length = 630
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/595 (56%), Positives = 443/595 (74%), Gaps = 5/595 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSG F + ++ R+MDSN +EKERGITI +KN +I +
Sbjct: 32 AIIAHVDHGKTTLVDKLLQQSGIFGEREDTTERVMDSNILEKERGITILAKNTAINWKNY 91
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 92 RINIVDTPGHADFGGEVERVISMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 151
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR RP+WV+D FDLF L AT+EQLDFP+IYTSAL G A ++ +M PL++
Sbjct: 152 KVDRPGVRPDWVIDQVFDLFVNLDATDEQLDFPIIYTSALLGIAGKDYNDMAKDMTPLYQ 211
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ YV + P Q+QI L+YS+YLG IGIGRI G+++ Q V+I++ K
Sbjct: 212 AIVTYVSAPQVEIEAPFQMQISQLDYSNYLGVIGIGRIKRGQVRPNQQVIIIDS-RGKTR 270
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ +I + GL+R+ N A +GDI+ ITG+ ++ I +TICD S LP+L++DEPT+
Sbjct: 271 NAKVGKILGYMGLERIECNSAAAGDIIAITGLGDLNISNTICDASAVEALPVLSVDEPTV 330
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKFIT+RQI RL E+ +N+ LRV + + D ++ VSGRGELHL
Sbjct: 331 SMCFGVNTSPFCGKEGKFITSRQILKRLKQEVIHNVALRVEETE-DPDVFCVSGRGELHL 389
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP+VIF+ +NG EP+EN+ +DIE +QG +Q L R DL
Sbjct: 390 SILIENMRREGFELAVSRPKVIFRIINGRQQEPFENVTLDIEYRHQGYAIQALGERKADL 449
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y I SRGLIG +NEF+T+T GTGL+ F Y + LGKR
Sbjct: 450 KNMNADGKGRVRLDYIISSRGLIGLRNEFMTMTSGTGLLYSTFSHYD---DMCPVVLGKR 506
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+ GVLIS GK +A++L+ LQDRG+LF+ H VYEG +IGIHSR NDL VN + K+L
Sbjct: 507 KEGVLISNGQGKVLAFALYSLQDRGKLFLGHGVEVYEGQVIGIHSRPNDLTVNCLTGKKL 566
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
TN+R+SG+DEAI L+ IK+TLE ++EFI+DDELVE+TP +IR+RKR+LKEN+RK
Sbjct: 567 TNMRASGTDEAITLVPAIKMTLEQSLEFIDDDELVEVTPNSIRIRKRYLKENDRK 621
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + +F E T+ + N++ IT L
Sbjct: 31 IAIIAHVDHGKTTLVDKLLQQSGIFGEREDTTERVMDSNILEKERGITILAKNTAINWKN 90
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 91 YRINIVDTPGHADFGGEVERVISMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 150
Query: 176 NKIDKLDINLDRI 188
NK+D+ + D +
Sbjct: 151 NKVDRPGVRPDWV 163
>gi|238790757|ref|ZP_04634517.1| GTP-binding protein typA/bipA [Yersinia frederiksenii ATCC 33641]
gi|238721155|gb|EEQ12835.1| GTP-binding protein typA/bipA [Yersinia frederiksenii ATCC 33641]
Length = 607
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A E+ +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALLGIAGEDHNNMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDIV ITG+ E+ I T+CD + LP L++DEPT+
Sbjct: 248 NGKVGKVLTHMGLERIEATVAEAGDIVAITGLGELNISDTVCDVNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDSDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E++ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRVIDGRNQEPFESVTLDIEEQHQGAVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KDMVPDGKGRIRLDYMIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGDIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+KLQDRG+LFI H VYEG IIGIHSR NDL VN + KQL
Sbjct: 484 QNGVLISNGQGKAVAFALFKLQDRGKLFIGHGTEVYEGQIIGIHSRSNDLTVNCLTGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ +K TLE A+EFI+DDELVE+TP +IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPFLKKTLEQALEFIDDDELVEVTPLSIRIRKRHLTENDRKR 599
Score = 70.1 bits (170), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERTEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|197286710|ref|YP_002152582.1| GTP-binding protein [Proteus mirabilis HI4320]
gi|425069558|ref|ZP_18472673.1| GTP-binding protein TypA/BipA [Proteus mirabilis WGLW6]
gi|425071014|ref|ZP_18474120.1| GTP-binding protein TypA/BipA [Proteus mirabilis WGLW4]
gi|194684197|emb|CAR45675.1| GTP-binding protein [Proteus mirabilis HI4320]
gi|404596984|gb|EKA97491.1| GTP-binding protein TypA/BipA [Proteus mirabilis WGLW6]
gi|404599839|gb|EKB00292.1| GTP-binding protein TypA/BipA [Proteus mirabilis WGLW4]
Length = 605
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL+QSGTF + + + R+MDSN++E+ERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTIVDKLLQQSGTFGERETVAERVMDSNDLERERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANNLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL+E
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGIAGTDYNDMADDMTPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYV K + Q+QI L+Y++YLG IGIGRI G++K Q V I++ + N
Sbjct: 189 AIVKYVEPPKVDLEGTFQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDSEGNTRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ V+ A +GDI+ ITG+ E+ I TIC+ LP L +DEPT+
Sbjct: 249 -GKVGKVLGHLGLERIDVDVAEAGDIIAITGLGELNISDTICEVGAVEALPALAVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP GREGKF+T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMYFCVNTSPFCGREGKFVTSRQILDRLKKELVHNVALRVEETEDPDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL+VSRP+VIF+ ++G EP+E + +DIEE +QG +MQ + R G++
Sbjct: 367 SVLIENMRREGYELAVSRPKVIFREIDGRKQEPFEQVTIDIEEQHQGDVMQAMGERKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 RDMQPDGKGRVRLDYIIPSRGLIGFRTEFMTMTSGTGLLYATFSHYD---DVRPGEIGRR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV+IS GKAVAY+L+ LQDRG+LF+ H VYEG +IGIH+R NDL VN + K+L
Sbjct: 484 NNGVMISNGQGKAVAYALYSLQDRGKLFVTHGAEVYEGQVIGIHTRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L IK TLE A+EFI+DDELVE+TP++IRLRKR L EN+R++
Sbjct: 544 TNMRASGTDEATTLTPHIKQTLEQALEFIDDDELVEVTPQSIRLRKRHLSENDRRR 599
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F E + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTIVDKLLQQSGTFGERETVAERVMDSNDLERERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A + + IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANNLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|212711598|ref|ZP_03319726.1| hypothetical protein PROVALCAL_02673 [Providencia alcalifaciens DSM
30120]
gi|212685700|gb|EEB45228.1| hypothetical protein PROVALCAL_02673 [Providencia alcalifaciens DSM
30120]
Length = 607
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+ LL+QSGTF + + ++ R+MDSN++EKERGITI +KN +I++NG
Sbjct: 10 AIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD VLL++DA++GPMPQTRFVT+KA G +PIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVMSMVDCVLLVVDAMDGPMPQTRFVTQKAFDHGLRPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PL+E
Sbjct: 130 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLDHTDMAEDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V K + P Q+Q+ L+Y+SYLG IGIGRI G +K Q V +++ + K
Sbjct: 190 AIVEHVEPPKVDLEGPFQMQVSQLDYNSYLGVIGIGRIKRGTVKPNQQVTVIDS-EGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GL+R+ +A +GDIV +TG+ E+ I TIC LP L +DEPT+
Sbjct: 249 NGKIGKVLTHLGLERIDSQQAEAGDIVALTGLGELNISDTICQVGNVEALPALAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ + VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 309 SMFYCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETQDPDA-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E + +D+EE NQG +M+ L R GDL
Sbjct: 368 SVLIENMRREGFELAVSRPKVIIREIDGRKQEPFEQVTLDVEEQNQGDVMKALGERKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G R
Sbjct: 428 RDMMPDGKGRVRLDYIIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGGR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 485 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK+TLE A+EFI+DDELVE+TP +IRLRKR L EN+R++
Sbjct: 545 TNMRASGTDEATTLSPPIKMTLEQALEFIDDDELVEVTPLSIRLRKRHLTENDRRR 600
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+ + + + F E + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVMSMVDCVLLVVDAMDGPMPQTRFVTQKAFDHGLRPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|417841292|ref|ZP_12487396.1| GTP-binding protein TypA/BipA [Haemophilus haemolyticus M19501]
gi|341949330|gb|EGT75934.1| GTP-binding protein TypA/BipA [Haemophilus haemolyticus M19501]
Length = 616
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKYVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGAIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|365089881|ref|ZP_09328389.1| translation initiation factor IF-2 [Acidovorax sp. NO-1]
gi|363416574|gb|EHL23678.1| translation initiation factor IF-2 [Acidovorax sp. NO-1]
Length = 954
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/539 (60%), Positives = 437/539 (81%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K++ VIK LMK+GQMVTINQ LDQ+TAMI+VEE+GH A + L+DPE+F +E +
Sbjct: 389 MSIKANEVIKALMKMGQMVTINQPLDQDTAMIVVEELGHKAVVAALDDPEAFT-DEDSGQ 447
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ++F
Sbjct: 448 QNVELLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGMVSF 507
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK +GVP++VAI K DK
Sbjct: 508 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAGVPIVVAITKSDK 567
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L+ E+V+PEEYGG SPF+ +S+KTG+GI+ LLE + LQAE+LELKAPV
Sbjct: 568 PDANPDRVKQELVVEEVVPEEYGGDSPFVPVSSKTGMGIDTLLEQVLLQAEVLELKAPVD 627
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
+ AKG++IE++LDKG+GPVATVL+Q+GTL+ D+V+AG +YGR+R+ML+ENGK AGP
Sbjct: 628 SLAKGLVIEAQLDKGRGPVATVLVQAGTLKVGDVVLAGQTYGRVRAMLDENGKVAKTAGP 687
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGLT+VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K ENMF D+
Sbjct: 688 SIPVEIQGLTEVPQAGDEFMVLTDERRAREIATYRAGKFRNTKLAKQQAAKLENMFADMT 747
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+VK L II+K DV GS+E L +SL LSTD+VK+Q+++ AVG I+ESDINLAIASKAI
Sbjct: 748 AGEVKTLPIIVKADVQGSQEALAQSLLKLSTDEVKVQLVYAAVGAISESDINLAIASKAI 807
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ N +++ Y++IIY+ + E++ ++ ++ E++E ++G AEIR
Sbjct: 808 VIGFNVRADAGARKLAEGNGVDLHYYSIIYDAVDELRVAMSGMLAPEQREEVIGTAEIRT 867
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG YI G++ R++K R+LR+ +++TGE+DS+KR KD+VK+VK GFEC
Sbjct: 868 VFVASKIGTVAGSYITSGMVHRNAKFRLLRDNVVVYTGEVDSIKRLKDDVKDVKEGFEC 926
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 917 ENIYILIKSAII---AHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
+N+ +L ++ ++ HVDHGKT+L+D++ R + I I + +E RG+
Sbjct: 448 QNVELLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGMVS 506
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
F +DTPGH F R D V+L++ A +G MPQT+ + A
Sbjct: 507 F---------------LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHA 551
Query: 1034 LKLGFKPIVVVNKIDRSNARPE 1055
G +V + K D+ +A P+
Sbjct: 552 KAAGVPIVVAITKSDKPDANPD 573
>gi|399543688|ref|YP_006556996.1| GTP-binding protein TypA/BipA [Marinobacter sp. BSs20148]
gi|399159020|gb|AFP29583.1| GTP-binding protein TypA/BipA [Marinobacter sp. BSs20148]
Length = 603
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/596 (55%), Positives = 441/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLR SGT + + + R+MDSN+ EKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRLSGTLDRKELESERVMDSNDQEKERGITILAKNTALKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD VLL++D+++GPMPQTRFVT+KA G +PIV+VN
Sbjct: 69 DINIVDTPGHADFGGEVERVMSMVDCVLLVVDSIDGPMPQTRFVTQKAFAAGLRPIVIVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ FDLFD L AT+EQLDFP++Y SAL+G + + NM P+F+
Sbjct: 129 KIDRPGARPDWVVEQVFDLFDSLGATDEQLDFPIVYASALNGISGLEHENLVDNMDPVFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + P Q+QI L+YSS+LG IGIGRI G+IK+ V+ + G D K
Sbjct: 189 AIVDHVPAPNVDREGPFQMQISQLDYSSFLGVIGIGRIARGKIKTNTQVIAV-GADGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +I +I GL RV V+EA +GDI+ I+G+++I I T+CD + LP L +DEPT+
Sbjct: 248 QGRILKIMGHSGLHRVEVDEAQAGDIICISGLDQIHISDTLCDLNNVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP GREGKF+T+R IK+RL+ E+ +N+ LRV D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGREGKFVTSRNIKDRLEKELLHNVALRVEDGDTMDK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRRE +EL+V RP V+ K ++G EPYEN+ VDIEE +QG +M++ R G+L
Sbjct: 367 SVLIENMRRENFELAVGRPEVVIKVVDGVKQEPYENVIVDIEEQHQGPLMEQFGLRRGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RLEY IP+RGLIGF+N F+T+T GTG+++ F Y P D+ R
Sbjct: 427 TNMVPDGKGRMRLEYTIPARGLIGFRNSFLTMTSGTGILTSTFSHYGPI---KAGDVTSR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +G A+ YSL LQ RG+LF++ VYEG + GIHSRDNDL++NP K K+L
Sbjct: 484 QNGVLVSMATGTALTYSLETLQSRGKLFLDPGQAVYEGQLCGIHSRDNDLVINPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
N+R+SG DE I L+ PIK TLE A+EFI+DDELVE+TPK+IRLRK+ L EN+RK+
Sbjct: 544 DNMRASGKDEVIPLVPPIKHTLEQALEFIDDDELVEVTPKSIRLRKKHLTENDRKR 599
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRLSGTLDRKELESERVMDSNDQEKERGITILAKNTALKWNG 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+LVV + DG MPQTR A +G+ IV +
Sbjct: 68 YDINIVDTPGHADFGGEVERVMSMVDCVLLVVDSIDGPMPQTRFVTQKAFAAGLRPIVIV 127
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKID+ + D + EQV
Sbjct: 128 NKIDR-----PGARPDWVVEQV 144
>gi|226327589|ref|ZP_03803107.1| hypothetical protein PROPEN_01460 [Proteus penneri ATCC 35198]
gi|225204115|gb|EEG86469.1| GTP-binding protein TypA [Proteus penneri ATCC 35198]
Length = 611
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL+QSGTF + + + R+MDSN++E+ERGITI +KN +I++N
Sbjct: 15 AIIAHVDHGKTTIVDKLLQQSGTFGERETVAERVMDSNDLERERGITILAKNTAIKWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANNLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL+E
Sbjct: 135 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGIAGTDYNDMAEDMTPLYE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYV K + Q+QI L+Y++YLG IGIGRI G++K Q V I++ + N
Sbjct: 195 AIVKYVEPPKVDLEGTFQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDSEGNTRN 254
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ V+ A +GDI+ ITG+ E+ I TIC+ LP L +DEPT+
Sbjct: 255 -GKVGKVLGHLGLERIEVDVAEAGDIIAITGLGELNISDTICEVGAVEALPALAVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP GREGKF+T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 314 SMYFCVNTSPFCGREGKFVTSRQILDRLKKELVHNVALRVEETEDPDA-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL VSRP+VIF+ ++G EP+E + +DIEE +QG +MQ + R G++
Sbjct: 373 SVLIENMRREGYELGVSRPKVIFRDIDGRKQEPFEQVTIDIEEQHQGDVMQAMGERKGEM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 433 RDMQPDGKGRVRLDYIIPSRGLIGFRTEFMTMTSGTGLLYATFSHYD---DVRPGEIGRR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV+IS GKAVAY+L+ LQDRG+LF+ H VYEG +IGIH+R NDL VN + K+L
Sbjct: 490 NNGVMISNGQGKAVAYALYSLQDRGKLFVTHGAEVYEGQVIGIHTRSNDLTVNCLTGKKL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +K TLE A+EFI+DDELVE+TP++IRLRKR+L EN+R++
Sbjct: 550 TNMRASGTDEATTLTPHLKQTLEQALEFIDDDELVEVTPQSIRLRKRYLSENDRRR 605
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F E + + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTIVDKLLQQSGTFGERETVAERVMDSNDLERERGITILAKNTAIKWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A + + IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANNLKPIVVI 133
Query: 176 NKIDK 180
NK+D+
Sbjct: 134 NKVDR 138
>gi|227355100|ref|ZP_03839511.1| GTP-binding protein [Proteus mirabilis ATCC 29906]
gi|227164887|gb|EEI49734.1| GTP-binding protein [Proteus mirabilis ATCC 29906]
Length = 611
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTT++D LL+QSGTF + + + R+MDSN++E+ERGITI +KN +I++N
Sbjct: 15 AIIAHVDHGKTTIVDKLLQQSGTFGERETVAERVMDSNDLERERGITILAKNTAIKWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANNLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL+E
Sbjct: 135 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGIAGTDYNDMADDMTPLYE 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYV K + Q+QI L+Y++YLG IGIGRI G++K Q V I++ + N
Sbjct: 195 AIVKYVEPPKVDLEGTFQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTIIDSEGNTRN 254
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ V+ A +GDI+ ITG+ E+ I TIC+ LP L +DEPT+
Sbjct: 255 -GKVGKVLGHLGLERIDVDVAEAGDIIAITGLGELNISDTICEVGAVEALPALAVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP GREGKF+T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 314 SMYFCVNTSPFCGREGKFVTSRQILDRLKKELVHNVALRVEETEDPDA-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREGYEL+VSRP+VIF+ ++G EP+E + +DIEE +QG +MQ + R G++
Sbjct: 373 SVLIENMRREGYELAVSRPKVIFREIDGRKQEPFEQVTIDIEEQHQGDVMQAMGERKGEM 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 433 RDMQPDGKGRVRLDYIIPSRGLIGFRTEFMTMTSGTGLLYATFSHYD---DVRPGEIGRR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGV+IS GKAVAY+L+ LQDRG+LF+ H VYEG +IGIH+R NDL VN + K+L
Sbjct: 490 NNGVMISNGQGKAVAYALYSLQDRGKLFVTHGAEVYEGQVIGIHTRSNDLTVNCLTGKKL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L IK TLE A+EFI+DDELVE+TP++IRLRKR L EN+R++
Sbjct: 550 TNMRASGTDEATTLTPHIKQTLEQALEFIDDDELVEVTPQSIRLRKRHLSENDRRR 605
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+++D + + + F E + + + N + IT L
Sbjct: 14 IAIIAHVDHGKTTIVDKLLQQSGTFGERETVAERVMDSNDLERERGITILAKNTAIKWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A + + IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANNLKPIVVI 133
Query: 176 NKIDK 180
NK+D+
Sbjct: 134 NKVDR 138
>gi|114331632|ref|YP_747854.1| translation initiation factor IF-2 [Nitrosomonas eutropha C91]
gi|122313589|sp|Q0AFJ3.1|IF2_NITEC RecName: Full=Translation initiation factor IF-2
gi|114308646|gb|ABI59889.1| bacterial translation initiation factor 2 (bIF-2) [Nitrosomonas
eutropha C91]
Length = 888
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/539 (60%), Positives = 427/539 (79%), Gaps = 2/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ VIK LMK+G MVTINQ+LDQ+TAMI+VEEMGHVA + ++PE+FL
Sbjct: 324 MAVKAAEVIKVLMKMGNMVTINQMLDQDTAMIVVEEMGHVAKIAAPDNPEAFLEEVDLSP 383
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
A RAP+VT+MGHVDHGKTSLLDYIR+T V EAGGITQHIGAY+V T+ G +TF
Sbjct: 384 DEARMESRAPVVTVMGHVDHGKTSLLDYIRRTRVAGGEAGGITQHIGAYHVKTSRGVVTF 443
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK+TDIV+LVVAADDGVMPQT EA+ HAK + +P++VA+NK+DK
Sbjct: 444 LDTPGHEAFTAMRARGAKITDIVILVVAADDGVMPQTIEAVHHAKAASIPIVVAVNKMDK 503
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ NL+RIKQ+L++ V+PE++GG + FI +SAKTG GI++LLE + LQAE+LELKA
Sbjct: 504 PEANLERIKQELVNHGVVPEDWGGDAMFIGVSAKTGQGIDELLEAVLLQAEVLELKAVRD 563
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PAKGVIIESRLDKG+GPVATVL+QSGTLR D+V+ GA +G+IR+ML+E GK++ EAG
Sbjct: 564 APAKGVIIESRLDKGRGPVATVLVQSGTLRRGDVVLTGAVFGKIRAMLDERGKSVSEAGT 623
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL++V +GE + +E+KAREI LFRQGKFRDV+L K + K E++F +
Sbjct: 624 SIPVEIQGLSEVAAAGEVFIALSDERKAREIALFRQGKFRDVRLDKLHVAKMEDVFG--H 681
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+E + L +IIK DV GS E L +LK L TD+VKI ++H+ VG I ESDINLA+ASKA+
Sbjct: 682 QEDISTLNLIIKADVQGSCEALAYALKKLETDEVKINIVHSGVGAIIESDINLALASKAV 741
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFN RAD RKL +++RY+NIIY + E+K ++ ++ ++KE +LGL +IR+
Sbjct: 742 VIGFNCRADLGARKLIASTGVDVRYYNIIYEAVDEVKKALSGMMTPDRKEKILGLVDIRE 801
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ ++KV +AGCY+LEGLIRRD+ +R+LR+ +I +G LDSLKRFKD+VKEVK+GFEC
Sbjct: 802 IYRISKVGVVAGCYVLEGLIRRDAPVRVLRDGVVIHSGSLDSLKRFKDDVKEVKSGFEC 860
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + ++ RG+ F
Sbjct: 397 VMGHVDHGKTSLLDYIRRTRVAGGEAGGITQHI-GAYHVKTSRGVVTF------------ 443
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R + D V+L++ A +G MPQT A +V VNK
Sbjct: 444 ---LDTPGHEAFTAMRARGAKITDIVILVVAADDGVMPQTIEAVHHAKAASIPIVVAVNK 500
Query: 1047 IDRSNA 1052
+D+ A
Sbjct: 501 MDKPEA 506
>gi|417839285|ref|ZP_12485478.1| GTP-binding protein TypA/BipA [Haemophilus haemolyticus M19107]
gi|341953855|gb|EGT80351.1| GTP-binding protein TypA/BipA [Haemophilus haemolyticus M19107]
Length = 616
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 449/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESTRGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+++V K + P Q+QI L+Y+SY+G IGIGRI G IK Q V I++G + K
Sbjct: 194 EAIVQHVEPPKVELDAPFQMQISQLDYNSYVGVIGIGRIKRGAIKPNQPVTIIDG-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ ++ Q+ GL R + A +GDI+ ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRVGQVLGHLGLQRYEEDIAYAGDIIAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRQIDGRKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ EF+T+T GTGL+ F+ Y ++G+
Sbjct: 432 VRDMMPDGKGRVRLEYIIPSRGLIGFRGEFMTMTSGTGLLYSSFDHYDDI---KPGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K TLE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFTLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF-SEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F S G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESTRGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|33151536|ref|NP_872889.1| GTP-binding protein, elongation factor typA/bipA-like protein
[Haemophilus ducreyi 35000HP]
gi|33147756|gb|AAP95278.1| GTP-binding protein, elongation factor typA/bipA-like protein
[Haemophilus ducreyi 35000HP]
Length = 615
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/597 (56%), Positives = 445/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWND 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A +A +M PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGLEHEALAEDMTPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V + P Q+QI L+Y++Y+G IGIGRI G IK Q + +++ + K
Sbjct: 193 EAIVKHVQAPSVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTITVIDA-NGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q+ GL R EA +GDI+ ITG+ E+ I TICD + LP L +DEPT
Sbjct: 252 RNGKVGQVLGHLGLQRYEATEAFAGDIIAITGLVELNISDTICDINNVEMLPALTVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 312 VTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI+K NG+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIYKEENGKKQEPFEQVTIDIEEQHQGSVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKLGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 488 RKNGVLISNATGKALAYALFGLQERGKLMIEHGVDVYEGQIIGIHSRSNDLTVNCLQGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K+TLE A+EFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 548 LTNMRASGKDDAIVLTTPVKMTLEQALEFIDDDELVEVTPQSVRIRKRLLTENDRKR 604
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 85/200 (42%), Gaps = 35/200 (17%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + E G I A N N
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWN 71
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG----------IN 220
INK+D + D +D++ ++ E+ P I SA GV +
Sbjct: 132 INKVDRPGARPDWVVDQVFDLFVNLGATDEQL--DFPIIYASALMGVAGLEHEALAEDMT 189
Query: 221 KLLENI--SLQAEILELKAP 238
L E I +QA +EL AP
Sbjct: 190 PLFEAIVKHVQAPSVELDAP 209
>gi|421079354|ref|ZP_15540298.1| Putative GTP-binding protein TypA [Pectobacterium wasabiae CFBP 3304]
gi|401706060|gb|EJS96239.1| Putative GTP-binding protein TypA [Pectobacterium wasabiae CFBP 3304]
Length = 607
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/596 (54%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHNEMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVDHVSPPQVEMDAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDATEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVDETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRVIDGRNQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRQGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLVSNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSVRIRKRHLTENDRKR 599
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|145634713|ref|ZP_01790421.1| GTP-binding protein TypA/ BipA [Haemophilus influenzae PittAA]
gi|148826491|ref|YP_001291244.1| aminopeptidase B [Haemophilus influenzae PittEE]
gi|145267879|gb|EDK07875.1| GTP-binding protein TypA/ BipA [Haemophilus influenzae PittAA]
gi|148716651|gb|ABQ98861.1| aminopeptidase B [Haemophilus influenzae PittEE]
Length = 616
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/605 (56%), Positives = 451/605 (74%), Gaps = 6/605 (0%)
Query: 918 NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSK 976
NI L AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +K
Sbjct: 6 NIKKLRNIAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAK 65
Query: 977 NCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKL 1036
N +I +N RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA
Sbjct: 66 NTAINWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAH 125
Query: 1037 GFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKAR 1096
G KPIVV+NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A +
Sbjct: 126 GLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDL 185
Query: 1097 QGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVI 1156
+M PLFEAI+KYV K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I
Sbjct: 186 AEDMTPLFEAIVKYVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGAIKPNQPVTI 245
Query: 1157 MNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLP 1216
+N + K + +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP
Sbjct: 246 INS-EGKTRQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALP 304
Query: 1217 MLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYE 1276
L +DEPT+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D +
Sbjct: 305 SLTVDEPTVTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FR 363
Query: 1277 VSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQ 1336
VSGRGELHL++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+
Sbjct: 364 VSGRGELHLSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVME 423
Query: 1337 KLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYN 1396
L R G+++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y
Sbjct: 424 ALGIRKGEVRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKG 483
Query: 1397 KSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLL 1456
D+G+R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL
Sbjct: 484 G---DIGQRKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLT 540
Query: 1457 VNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKE 1516
VN ++ K+LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L E
Sbjct: 541 VNCLQGKKLTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTE 600
Query: 1517 NERKK 1521
N+RK+
Sbjct: 601 NDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|262377502|ref|ZP_06070724.1| GTP-binding protein TypA/BipA [Acinetobacter lwoffii SH145]
gi|262307558|gb|EEY88699.1| GTP-binding protein TypA/BipA [Acinetobacter lwoffii SH145]
gi|407007835|gb|EKE23382.1| hypothetical protein ACD_6C00496G0001 [uncultured bacterium]
Length = 612
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/610 (53%), Positives = 441/610 (72%), Gaps = 11/610 (1%)
Query: 918 NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKN 977
+I L AIIAHVDHGKTTL+D LL+QSG R+MDS IE ERGITI +KN
Sbjct: 3 DIKTLRNIAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKN 62
Query: 978 CSIEY------NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
+I++ RINI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT+
Sbjct: 63 TAIKWLDERTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQ 122
Query: 1032 KALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANE 1091
KA G KPIV++NK+D+ +ARP+WV+D FDLFD L A++EQLDFPV+Y S L G A
Sbjct: 123 KAFARGLKPIVIINKVDKPSARPDWVIDQVFDLFDNLGASDEQLDFPVVYASGLRGVAGP 182
Query: 1092 NSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ + +M PLF+ I+ V + + P Q+Q+ SL+Y+S++G IGIGRI G +K
Sbjct: 183 SPEELAEDMTPLFQTIVDIVEPPAVDVDGPFQMQVSSLDYNSFVGVIGIGRIQRGSVKLN 242
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSK 1211
V +++ D K +I +I + GLDRV V EA +GDIV +TGI+ + I TICDP
Sbjct: 243 TQVTVID-KDGKTRNGRILKIMGYHGLDRVDVEEASAGDIVCVTGIDALNISDTICDPKN 301
Query: 1212 PNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHD 1271
LP L++DEPT+++ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV
Sbjct: 302 VEALPPLSVDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSP 361
Query: 1272 DSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQ 1331
D ++VSGRGELHL++LIENMRREG+E+ VSRP+VI K ++GE EPYEN+ D+EE +Q
Sbjct: 362 DR-FKVSGRGELHLSVLIENMRREGFEMGVSRPQVIIKEIDGEKQEPYENVTFDVEEQHQ 420
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G +M+++ +R G++ N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y
Sbjct: 421 GAVMEQMGHRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHY 480
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
P + + KR+NGVLIS G + Y+L+ LQDRGRLF VYEGMIIGI+SR
Sbjct: 481 GPMKQGT---VAKRQNGVLISMVQGTCLGYALFTLQDRGRLFAKPQLEVYEGMIIGINSR 537
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
+D+ VNP K KQLTN+R+SG+D+A+ L+ I+ TLE A+EFI DDELVE+TPK+IR+RK
Sbjct: 538 SDDMTVNPTKAKQLTNVRASGTDDALTLVPAIEYTLEQALEFIEDDELVEVTPKSIRIRK 597
Query: 1512 RFLKENERKK 1521
RFL ENERK+
Sbjct: 598 RFLTENERKR 607
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKNTAIKWLD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 ERTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|261823695|ref|YP_003261801.1| GTP-binding protein TypA [Pectobacterium wasabiae WPP163]
gi|261607708|gb|ACX90194.1| GTP-binding protein TypA [Pectobacterium wasabiae WPP163]
gi|385874209|gb|AFI92729.1| GTP-binding protein TypA/BipA [Pectobacterium sp. SCC3193]
Length = 607
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/596 (54%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVDHVSPPQVEMDAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDATEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVDETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRVIDGRNQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRQGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLVSNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSVRIRKRHLTENDRKR 599
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|3047405|gb|AAC13722.1| tyrosine phosphorylated protein A [Escherichia coli]
Length = 588
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/585 (55%), Positives = 442/585 (75%), Gaps = 5/585 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNFDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+E+ +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEQQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLR 1510
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DD+LVE+TP +IR+R
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIHDDKLVEVTPISIRIR 588
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|420142331|ref|ZP_14649946.1| regulatory protein TypA, partial [Pseudomonas aeruginosa CIG1]
gi|403244906|gb|EJY58747.1| regulatory protein TypA, partial [Pseudomonas aeruginosa CIG1]
Length = 596
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/593 (55%), Positives = 437/593 (73%), Gaps = 5/593 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+ SGT + + + R+MDSN+ EKERGITI +KN +I++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLKLSGTLDRKEAESERVMDSNDQEKERGITILAKNTAIKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGLDHEKMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP ++ P Q+QI L+Y+S+LG IGIGRI G++KS VV ++ K N
Sbjct: 189 AIIDHVPAPVVDTEGPFQMQISQLDYNSFLGVIGIGRITRGKVKSNTPVVAISDDGSKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G+EE+ I T+CDP LP L +D+PT+
Sbjct: 249 -GRILKIMGHHGLQRVEVAEAEAGDIVCVSGMEELFISDTLCDPQNVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AGREGKF+T+R IK RL+ E+ +N+ LRV + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGREGKFVTSRNIKERLEKELLHNVALRVEPGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+EL+V RP V+ +GE EPYEN+ +DIEE +QG +M+++ R GDL
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIEKDGEKQEPYENVTIDIEEQHQGSVMEQMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+N F+TLT GTG+++ F Y P ++ R
Sbjct: 427 SNMIPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGTGILTSTFSHYGPI---KAGEVSNR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+L
Sbjct: 484 QNGVLVSMATGTALTYSLETLQSRGKLFLGPGDEIYEGQLAGINSRDNDLVINPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENE 1518
N+R+SG DE I L+ PI+ TLE A+EFI DDELVE+TPK+IRLRK+ L EN+
Sbjct: 544 DNMRASGKDEVIALVPPIRFTLEQALEFIADDELVEVTPKSIRLRKKMLNEND 596
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + ++ + N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLKLSGTLDRKEAESERVMDSNDQEKERGITILAKNTAIKWNG 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|227327127|ref|ZP_03831151.1| GTP-binding regulatory protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|403056456|ref|YP_006644673.1| GTP-binding protein TypA [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402803782|gb|AFR01420.1| GTP-binding protein TypA [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 607
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSPPQVEMDAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDATEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVDETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRVIDGRNQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSIRIRKRHLTENDRKR 599
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|406038589|ref|ZP_11045944.1| typA [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 611
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/606 (53%), Positives = 440/606 (72%), Gaps = 11/606 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSG R+MDSN +E ERGITI +KN SI +
Sbjct: 11 AIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTSITWLDK 70
Query: 986 R------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
R INI+DTPGHADFGGEVER+LSMVD VLLL+DA EGPMPQTRFVT+KA G K
Sbjct: 71 RTDITYRINIVDTPGHADFGGEVERVLSMVDCVLLLVDAQEGPMPQTRFVTQKAFARGLK 130
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIV++NK+D+ +ARP+WV+D FDLFD L AT+EQLDFP++Y S L G A + +
Sbjct: 131 PIVIINKVDKPSARPDWVIDQVFDLFDNLGATDEQLDFPIVYASGLRGVAGPAPEELAED 190
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLFE I+ V +++ P Q+QI SL+Y+S++G IG+GRI G +K+ V +++
Sbjct: 191 MTPLFETIVDIVEPPAVDADGPFQMQISSLDYNSFVGVIGVGRIQRGSVKTNTPVTVID- 249
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+ K +I +I + GL+R+ V EA +GDIV ITGI+ + I TICDP LP L+
Sbjct: 250 KEGKTRNGRILKIMGYHGLERIDVEEASAGDIVCITGIDALNISDTICDPKNVEALPPLS 309
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPT+++ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV D ++VSG
Sbjct: 310 VDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSPDR-FKVSG 368
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RGELHL++LIENMRREG+E+ VSRP+VI K ++GE EPYEN+ D+EE +QG +M+++
Sbjct: 369 RGELHLSVLIENMRREGFEMGVSRPQVIIKEVDGEKQEPYENVTFDVEEQHQGAVMEQMG 428
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
+R G++ N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y P +
Sbjct: 429 HRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHYGPVKQGT- 487
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
+ KR+NGVLIS G + Y+L+ LQDRGRLF VYEGMI+GI+SR +D++VNP
Sbjct: 488 --VAKRQNGVLISMVQGTCLGYALFSLQDRGRLFAKPQLEVYEGMIVGINSRSDDMVVNP 545
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
K KQLTN+R+SG+D+A+ L I+ TLE A+EFI DDELVE+TPK+IR+RKR+L ENER
Sbjct: 546 TKAKQLTNVRASGTDDALTLTPAIEYTLEQALEFIEDDELVEVTPKSIRIRKRYLTENER 605
Query: 1520 KKKLHK 1525
K+ K
Sbjct: 606 KRNRDK 611
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTSITWLD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V A +G MPQTR A G+
Sbjct: 70 KRTDITYRINIVDTPGHADFGGEVERVLSMVDCVLLLVDAQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|373466875|ref|ZP_09558184.1| GTP-binding protein TypA [Haemophilus sp. oral taxon 851 str. F0397]
gi|371759639|gb|EHO48351.1| GTP-binding protein TypA [Haemophilus sp. oral taxon 851 str. F0397]
Length = 616
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESTRGDVDERVMDSNDLEKERGITILAKNTAINWNN 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF-SEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F S G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESTRGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 NYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|315125289|ref|YP_004067292.1| GTP-binding protein [Pseudoalteromonas sp. SM9913]
gi|315013802|gb|ADT67140.1| GTP-binding protein [Pseudoalteromonas sp. SM9913]
Length = 607
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/596 (56%), Positives = 434/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAISWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT+EQLDF VIY SA++G+A + NM P+F+
Sbjct: 130 KIDKPGARPDWVMDQIFDLFDNLGATDEQLDFKVIYASAINGWATLDLDEASDNMEPMFK 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + Q+QI L+Y+SY G IGIGRI G + Q V +++ K N
Sbjct: 190 MIVDEVSPPDADPEGDFQMQISQLDYNSYKGVIGIGRIKRGSVVPNQQVTVISADGSKRN 249
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ + GL+R+ ++A +G+IV +TG+ E+ I T+C P+ LP L++DEPT+
Sbjct: 250 -GKIGSVQSYLGLERIDTDKAYAGNIVTVTGLGELKISDTLCCPNNVEALPPLSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP G+EGKF+T+R I+ RLD E+ +N+ LRV + DS + VSGRGELHL
Sbjct: 309 TMTFSVNNSPFCGKEGKFVTSRNIRERLDKELVHNVALRVADTDNPDS-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI +T++G L EPYE L +D +E +QG IM+++ R G+L
Sbjct: 368 GILIENMRREGYELAVSRPEVILRTVDGVLEEPYETLTIDCQEEHQGSIMEQIGLRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K R+RL++ IPSRGLIGFQ EF+TLT G+GL+ H F+ Y P +LG R
Sbjct: 428 TDMAPDGKGRMRLDFMIPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGG---ELGVR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+I+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 485 KNGVMIANATGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L + +LE A+EFI DDELVE+TP+NIR+RKR L ENERK+
Sbjct: 545 TNVRASGTDEAQTLTPALNYSLEQALEFIADDELVEVTPENIRIRKRHLTENERKR 600
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAISWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|145628218|ref|ZP_01784019.1| aminopeptidase B [Haemophilus influenzae 22.1-21]
gi|144979993|gb|EDJ89652.1| aminopeptidase B [Haemophilus influenzae 22.1-21]
Length = 616
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +I+ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDIDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ EF+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGEFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G I + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDIDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|319775202|ref|YP_004137690.1| GTP-binding protein [Haemophilus influenzae F3047]
gi|329122872|ref|ZP_08251444.1| glutathione-disulfide reductase [Haemophilus aegyptius ATCC 11116]
gi|317449793|emb|CBY86001.1| GTP-binding protein [Haemophilus influenzae F3047]
gi|327472136|gb|EGF17574.1| glutathione-disulfide reductase [Haemophilus aegyptius ATCC 11116]
Length = 616
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +I+ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDIDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKYVESPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGEFMTMTSGTGLLYSSFSHYDEIKGG---EIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G I + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDIDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|68249458|ref|YP_248570.1| GTP-binding protein TypA [Haemophilus influenzae 86-028NP]
gi|148828047|ref|YP_001292800.1| GTP-binding protein TypA/ BipA [Haemophilus influenzae PittGG]
gi|68057657|gb|AAX87910.1| GTP-binding protein TypA/ BipA [Haemophilus influenzae 86-028NP]
gi|148719289|gb|ABR00417.1| GTP-binding protein TypA/ BipA [Haemophilus influenzae PittGG]
Length = 616
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKYVESPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|398998236|ref|ZP_10701015.1| GTP-binding protein TypA/BipA [Pseudomonas sp. GM21]
gi|398120897|gb|EJM10541.1| GTP-binding protein TypA/BipA [Pseudomonas sp. GM21]
Length = 606
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/600 (54%), Positives = 440/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT +N+ + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A + A +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLDHTAMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP K + + P Q+QI +L+Y+S+LG IG+GRI GR+K VV ++ D K
Sbjct: 189 SIVDDVPAPKVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTPVVAIDA-DGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL R+ V EA +GDIV ++G +++ I T+CDP + L +DEPT+
Sbjct: 248 NGRILKLMGHHGLHRIDVEEAAAGDIVCVSGFDQLFISDTLCDPLNVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP GREGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGREGKFVTSRNIKERLDKELLYNVALRVEEGDSADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G +EPYEN+ +D+ E +QG IM+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIRMVDGVKHEPYENVTIDLPEESQGAIMEQMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+NEF+TLT G G+++ +F+ Y + D+ R
Sbjct: 427 TNMVPDGKGRVRLEYNIPARGLIGFRNEFLTLTSGGGILTSIFDRYDVMKSG---DMSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H +YEG I+G++SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVATGKALTYSLETLQARGKLFVEHGQDIYEGQIVGLNSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ P+K TLE A+EF+ +DEL E+TPK+IRLRK+ L E+ER + K
Sbjct: 544 DNMRASGKDETIALVPPVKFTLEQALEFVQEDELCEVTPKSIRLRKKILGESERTRAAKK 603
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|300985897|ref|ZP_07177633.1| GTP-binding protein TypA/BipA, partial [Escherichia coli MS 200-1]
gi|300306498|gb|EFJ61018.1| GTP-binding protein TypA/BipA [Escherichia coli MS 200-1]
Length = 584
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/581 (56%), Positives = 439/581 (75%), Gaps = 5/581 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKN 1506
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTS 584
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|146313726|ref|YP_001178800.1| GTP-binding protein TypA [Enterobacter sp. 638]
gi|145320602|gb|ABP62749.1| GTP-binding protein TypA [Enterobacter sp. 638]
Length = 607
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/597 (54%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF ++ R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFSNDRAEATERVMDSNDLEKERGITILAKNTAIKWND 68
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+
Sbjct: 69 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVVI 128
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL G A +M PL+
Sbjct: 129 NKVDRPGARPDWVVDQVFDLFVNLDASDEQLDFPIIYASALMGIAGNEHTDMAEDMTPLY 188
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ +V + + P Q+QI L+Y++Y+G IGIGRI GR+K Q + +++ + K
Sbjct: 189 QAIVDHVKAPSVDLDGPFQMQISQLDYNNYVGVIGIGRIKRGRVKPNQQITLIDS-EGKT 247
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I T+CDP LP L++DEPT
Sbjct: 248 RNGKVGKVLTHLGLERIESTEAEAGDIIAITGLGELNISDTLCDPQNVEALPALSVDEPT 307
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELH
Sbjct: 308 VTMFFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELH 366
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREG+EL+VSRP+VI + ++G L EP+EN+ +DIEE +QG +MQ + R GD
Sbjct: 367 LSVLIENMRREGFELAVSRPKVINRMIDGRLQEPFENVTLDIEEQHQGSVMQAMGERKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+
Sbjct: 427 VKDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVKPGEIGQ 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+
Sbjct: 484 RQNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG+DEA L+ +K++LE A+EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 LTNMRASGTDEATTLVPALKMSLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKR 600
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 28/193 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS-EAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + FS + T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFSNDRAEATERVMDSNDLEKERGITILAKNTAIKWN 67
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 68 DYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFAHGLKPIVV 127
Query: 175 INKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINK---LLENIS 227
INK+D + D +D++ ++ E+ P I SA G+ N+ + E+++
Sbjct: 128 INKVDRPGARPDWVVDQVFDLFVNLDASDEQL--DFPIIYASALMGIAGNEHTDMAEDMT 185
Query: 228 --LQAEILELKAP 238
QA + +KAP
Sbjct: 186 PLYQAIVDHVKAP 198
>gi|145638321|ref|ZP_01793931.1| GTP-binding protein TypA/ BipA [Haemophilus influenzae PittII]
gi|229844743|ref|ZP_04464882.1| aminopeptidase B [Haemophilus influenzae 6P18H1]
gi|319897640|ref|YP_004135837.1| gtp-binding protein [Haemophilus influenzae F3031]
gi|386266403|ref|YP_005829895.1| Ribosome binding GTPase BipA [Haemophilus influenzae R2846]
gi|145272650|gb|EDK12557.1| GTP-binding protein TypA/ BipA [Haemophilus influenzae PittII]
gi|229812457|gb|EEP48147.1| aminopeptidase B [Haemophilus influenzae 6P18H1]
gi|309973639|gb|ADO96840.1| Ribosome binding GTPase BipA [Haemophilus influenzae R2846]
gi|317433146|emb|CBY81520.1| GTP-binding protein [Haemophilus influenzae F3031]
Length = 616
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKYVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|268592274|ref|ZP_06126495.1| GTP-binding protein TypA/BipA [Providencia rettgeri DSM 1131]
gi|291312051|gb|EFE52504.1| GTP-binding protein TypA/BipA [Providencia rettgeri DSM 1131]
Length = 607
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/596 (55%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+ LL+QSGTF + + ++ R+MDSN++EKERGITI +KN +I++NG
Sbjct: 10 AIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD VLL++DA++GPMPQTRFVT+KA G +PIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVMSMVDCVLLVVDAMDGPMPQTRFVTQKAFDHGLRPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL+E
Sbjct: 130 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLDHENMAEDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q+Q+ L+Y+SYLG IGIGRI G +K Q V +++ + K
Sbjct: 190 AIVEHVAPPAVDIDGPFQMQVSQLDYNSYLGVIGIGRIKRGVVKPNQQVTVIDS-EGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GL+R+ +A +GDIV +TG+ E+ I TIC LP L +DEPT+
Sbjct: 249 NGKIGKVLTHLGLERIDSQQAEAGDIVALTGLGELNISDTICQVGSVEALPALAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ + VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 309 SMFYCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETQDPDA-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E + +D+EE +QG IM+ L R GDL
Sbjct: 368 SVLIENMRREGFELAVSRPKVIIREIDGRKQEPFEQVTLDVEEQHQGDIMKALGERKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G R
Sbjct: 428 RDMMPDGKGRVRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGGR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 485 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK+TLE A+EFI+DDELVE+TP++IRLRKR L EN+R++
Sbjct: 545 TNMRASGTDEATTLSPPIKMTLEQALEFIDDDELVEVTPQSIRLRKRHLTENDRRR 600
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+ + + + F E + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVMSMVDCVLLVVDAMDGPMPQTRFVTQKAFDHGLRPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|262281143|ref|ZP_06058925.1| GTP-binding elongation factor family protein [Acinetobacter
calcoaceticus RUH2202]
gi|262257374|gb|EEY76110.1| GTP-binding elongation factor family protein [Acinetobacter
calcoaceticus RUH2202]
Length = 611
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/614 (53%), Positives = 440/614 (71%), Gaps = 11/614 (1%)
Query: 918 NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKN 977
+I L AIIAHVDHGKTTL+D LL+QSG R+MDS IE ERGITI +KN
Sbjct: 3 DIKTLRNIAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKN 62
Query: 978 CSIEYNGTR------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
+I++ R INI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT
Sbjct: 63 TAIKWTDARTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTS 122
Query: 1032 KALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANE 1091
KA G KPIV++NK+D+ +ARP+WV+D FDLFD L T+EQLDFPV+Y S L G A
Sbjct: 123 KAFASGLKPIVIINKVDKPSARPDWVIDQVFDLFDNLGGTDEQLDFPVVYASGLRGVAGP 182
Query: 1092 NSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ + +M PLF+ I+ V + + P Q+QI SL+Y+S++G IG+GRI G +K
Sbjct: 183 SPEELADDMTPLFQTIVDIVEPPAVDVDGPFQMQISSLDYNSFVGVIGVGRIQRGSVKLN 242
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSK 1211
V +++ + K +I +I + GLDRV V EA +GDIV +TGI+ + I TICDP
Sbjct: 243 TPVTVID-KEGKTRNGRILKIMGYHGLDRVDVEEANAGDIVCVTGIDALHISDTICDPKN 301
Query: 1212 PNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHD 1271
LP L++DEPT+T+ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV
Sbjct: 302 VEALPPLSVDEPTVTMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSP 361
Query: 1272 DSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQ 1331
D ++VSGRGELHL++LIENMRREG+E+ VSRP+VI K ++GE EPYEN+ D+EE +Q
Sbjct: 362 DR-FKVSGRGELHLSVLIENMRREGFEMGVSRPQVILKEVDGEKQEPYENVTFDVEEQHQ 420
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G +M+++ YR G++ N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y
Sbjct: 421 GSVMEQMGYRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHY 480
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
P + + KR+NGVLIS G + Y+L+ LQDRGRLF VYEGMIIGI+SR
Sbjct: 481 GPMKQGT---VAKRQNGVLISMVQGVCLGYALFTLQDRGRLFAKPQLEVYEGMIIGINSR 537
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
+D++VNP K KQLTN+R+SG+DEA+ L ++ TLE A+EFI DDELVE+TPK+IR+RK
Sbjct: 538 SDDMVVNPTKAKQLTNVRASGTDEALTLTPAVEYTLEQALEFIEDDELVEVTPKSIRIRK 597
Query: 1512 RFLKENERKKKLHK 1525
R+L ENERK+ K
Sbjct: 598 RYLTENERKRNRDK 611
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKNTAIKWTD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR + A SG+
Sbjct: 70 ARTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTSKAFASGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|402700286|ref|ZP_10848265.1| GTP-binding protein TypA [Pseudomonas fragi A22]
Length = 606
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/600 (54%), Positives = 440/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERGELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLDHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP K + + P Q+QI +L+Y+S+LG IG+GRI GR+K VV ++ D K
Sbjct: 189 AIVDHVPAPKVDRDGPFQMQISALDYNSFLGIIGVGRIARGRVKPNTQVVAIDA-DGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL R+ V EA +GDIV I+G +++ I T+CDP + L +DEPT+
Sbjct: 248 NGRILKLMGHHGLHRIDVEEAAAGDIVCISGFDQLFISDTLCDPLNVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP GREGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGREGKFVTSRNIKERLDKELLYNVALRVEEGDTADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G +EPYEN+ +D+ E +QG IM+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIRMVDGVKHEPYENVTIDLPEESQGAIMEQIGIRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+NEF+TLT G G+++ +F+ Y + D+ R
Sbjct: 427 TNMVPDGKGRVRLEYNIPARGLIGFRNEFLTLTSGAGILTSIFDRYDVMKSG---DMSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H + VYEG I+GI+SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVATGKALTYSLETLQARGKLFLGHGEDVYEGQIVGINSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ PI+ TLE A+EF+ +DEL E+TPK+IRLRK+ L E+ER + K
Sbjct: 544 DNMRASGKDETIALVPPIRFTLEQALEFVQEDELCEVTPKSIRLRKKILGESERTRASKK 603
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERGELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|307244854|ref|ZP_07526953.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253808|ref|ZP_07535662.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258264|ref|ZP_07540007.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306854299|gb|EFM86505.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306863292|gb|EFM95232.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867724|gb|EFM99569.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 615
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 446/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWND 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGLEHEDLAEDMTPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ +V K N P Q+QI L+Y++Y+G IGIGRI G IK Q V +++ + K
Sbjct: 193 QAIVDHVEPPKVELNAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTVTVIDS-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q+ GL R NEA +GDI+ ITG+ E+ I TICD + LP L +DEPT
Sbjct: 252 RNGKVGQVLGHLGLQRYEANEAFAGDIIAITGLGELNISDTICDINNVEALPALTVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 312 VTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ NG+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIYREENGKKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 488 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRGNDLTVNCLQGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P++++LE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 548 LTNMRASGKDDAIVLTTPVRLSLEQALEFIDDDELVEVTPQSIRVRKRLLTENDRKR 604
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + E G I A N N
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWN 71
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|343511453|ref|ZP_08748613.1| GTP-binding protein TypA/BipA [Vibrio scophthalmi LMG 19158]
gi|342797895|gb|EGU33530.1| GTP-binding protein TypA/BipA [Vibrio scophthalmi LMG 19158]
Length = 610
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/598 (56%), Positives = 440/598 (73%), Gaps = 8/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARPEWV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPEWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A++ V + + PLQ+QI L+YSSY+G IG+ R+ G +++ Q V I+ G D
Sbjct: 193 AVVDTVDAPNVDLDGPLQMQISQLDYSSYVGVIGVARVTRGSVRANQQVTIV-GADGSKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R + +A +GDI+ ITG+ E+ I TICD + + L++DEPT+
Sbjct: 252 NGKVGTVMGYLGLNRHEIEQANAGDIIAITGLGELKISDTICDQNAVEAMTPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLQKELVHNVALRVEETDNPDR-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIF-KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
+ILIENMRREG+EL+VSRP VI K NG+L EP+E + +D+ E +QG IM+K+ R G+
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKKDENGDLSEPFEVVTIDVMEEHQGGIMEKIGLRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L ++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G
Sbjct: 431 LTDMAPDGKGRVRMDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGGV---IGM 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS +GKA+ Y+L+ LQDRGRLF H D VYEG +IGIH+R NDL VN +K KQ
Sbjct: 488 RNNGVLISNATGKALTYALFNLQDRGRLFTEHADEVYEGQVIGIHNRSNDLTVNCLKGKQ 547
Query: 1465 LTNIRSSGSDEAIQLISP-IKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG+DEA Q++SP IK TLE A+EFI++DELVE+TP++IR+RKR L EN+RK+
Sbjct: 548 LTNVRASGTDEA-QVLSPAIKYTLEQALEFIDEDELVEVTPESIRIRKRHLTENDRKR 604
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|92112374|ref|YP_572302.1| GTP-binding protein TypA [Chromohalobacter salexigens DSM 3043]
gi|91795464|gb|ABE57603.1| GTP-binding protein TypA [Chromohalobacter salexigens DSM 3043]
Length = 608
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/605 (53%), Positives = 439/605 (72%), Gaps = 10/605 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + RIMDSN+ EKERGITI SKN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERIMDSNDQEKERGITILSKNTAIRWQSP 68
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
INI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA G KP
Sbjct: 69 DERDYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFDRGLKP 128
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
IVVVNKIDR ARP+WV+D FDLFD L ATEEQLDFP+IY SAL G A +M
Sbjct: 129 IVVVNKIDRPGARPDWVIDQIFDLFDNLGATEEQLDFPIIYCSALDGVAGHEPDQLADDM 188
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
P+F++I+ V K + P Q+QI +L+Y+SY+G IG+GRI G ++ Q + +++
Sbjct: 189 TPMFKSIVDIVEPPKVELDAPFQMQISALDYNSYVGVIGLGRIKRGSVRPGQQISVIS-K 247
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI 1220
+ K K+ Q+ GL+RV EA +GDI+ ITGI+++ I T+CDP+ +P L +
Sbjct: 248 EGNVRKGKVGQVMTHLGLERVQTEEASAGDIICITGIDDLAISDTLCDPAAVEAMPALTV 307
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
DEPT+++ F VN+SP AG+EGKF+T+R IK RL+ E+ +N+ LRV Q + + VSGR
Sbjct: 308 DEPTVSMTFQVNDSPFAGKEGKFVTSRNIKERLEQELIHNVALRVEQGDSPEK-FTVSGR 366
Query: 1281 GELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY 1340
GELHL++LIE+MRREGYEL+V RP VI + ++G EPYE + +D EE +QG +M++L Y
Sbjct: 367 GELHLSVLIESMRREGYELAVGRPEVIIREIDGVKQEPYEEVIIDCEEQHQGAVMEELGY 426
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R G++ N+ + K RVRL++ IP+RGLIGF+ +F+TLT GTG+++ F+ Y P +
Sbjct: 427 RKGEMTNMNPDGKGRVRLDFIIPARGLIGFRGQFLTLTSGTGILTSRFDHYGPLKPDASI 486
Query: 1401 DLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPI 1460
+ RRNGVL+S SGKA+AY+L+ LQDRG+L + H VYEGM++GI++R +D+ VNP
Sbjct: 487 E---RRNGVLVSMVSGKALAYALFALQDRGKLIVEHGTEVYEGMLVGINNRADDMAVNPT 543
Query: 1461 KEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
K K+L N+R+SG+DE + L P++ TLE AIEF++DDELVEITP++IRLRK+ L ENERK
Sbjct: 544 KAKKLDNMRASGNDENLVLTPPVRFTLEQAIEFLDDDELVEITPQHIRLRKKHLTENERK 603
Query: 1521 KKLHK 1525
+ K
Sbjct: 604 RAKKK 608
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 21/130 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + I N IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLDRKAEGQERIMDSNDQEKERGITILSKNTAIRWQS 67
Query: 122 -----------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
DTPGH F R + D V+L+V A DG MPQTR A G+
Sbjct: 68 PDERDYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFDRGLK 127
Query: 171 LIVAINKIDK 180
IV +NKID+
Sbjct: 128 PIVVVNKIDR 137
>gi|422020179|ref|ZP_16366719.1| gtp-binding protein TypA/BipA [Providencia alcalifaciens Dmel2]
gi|414101774|gb|EKT63371.1| gtp-binding protein TypA/BipA [Providencia alcalifaciens Dmel2]
Length = 607
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 444/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+ LL+QSGTF + + ++ R+MDSN++EKERGITI +KN +I++NG
Sbjct: 10 AIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD VLL++DA++GPMPQTRFVT+KA G +PIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVMSMVDCVLLVVDAMDGPMPQTRFVTQKAFDHGLRPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PL+E
Sbjct: 130 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLDHTDMAEDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V K + P Q+Q+ L+Y+SYLG IGIGRI G +K Q V +++ + K
Sbjct: 190 AIVEHVEPPKVDLEGPFQMQVSQLDYNSYLGVIGIGRIKRGIVKPNQQVTVIDS-EGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GL+R+ +A +GDIV +TG+ E+ I TIC LP L +DEPT+
Sbjct: 249 NGKIGKVLTHLGLERIDSQQAEAGDIVALTGLGELNISDTICQVGNVEALPALAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ + VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 309 SMFYCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETQDPDA-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E + +D+EE NQG +M+ L R GDL
Sbjct: 368 SVLIENMRREGFELAVSRPKVIIREIDGRKQEPFEQVTLDVEEQNQGDVMKALGERKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G R
Sbjct: 428 RDMMPDGKGRVRLDYIIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGGR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 485 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK+TLE A+EFI+DDELVE+TP +IRLRKR L EN+R++
Sbjct: 545 TNMRASGTDEATTLSPPIKMTLEQALEFIDDDELVEVTPLSIRLRKRHLTENDRRR 600
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+ + + + F E + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVMSMVDCVLLVVDAMDGPMPQTRFVTQKAFDHGLRPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|381198577|ref|ZP_09905915.1| GTP-binding elongation factor family protein [Acinetobacter lwoffii
WJ10621]
Length = 612
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/610 (53%), Positives = 441/610 (72%), Gaps = 11/610 (1%)
Query: 918 NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKN 977
+I L AIIAHVDHGKTTL+D LL+QSG R+MDS IE ERGITI +KN
Sbjct: 3 DIKTLRNIAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKN 62
Query: 978 CSIEY------NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
+I++ RINI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT+
Sbjct: 63 TAIKWLDARTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQ 122
Query: 1032 KALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANE 1091
KA G KPIV++NK+D+ +ARP+WV+D FDLFD L ++EQLDFPV+Y S L G A
Sbjct: 123 KAFARGLKPIVIINKVDKPSARPDWVIDQVFDLFDNLGGSDEQLDFPVVYASGLRGVAGP 182
Query: 1092 NSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ + +M PLF+ I+ V + + P Q+QI SL+Y+S++G IG+GRI G +K
Sbjct: 183 SPEELAEDMTPLFQTIVDIVEPPAVDVDGPFQMQISSLDYNSFVGVIGVGRIQRGSVKLN 242
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSK 1211
V +++ D K +I +I + GL+RV V A +GDIV ITGI+E+ I TICDP
Sbjct: 243 TPVTVID-KDGKTRNGRILKIMGYHGLERVDVESAQAGDIVCITGIDELHISDTICDPKN 301
Query: 1212 PNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHD 1271
LP L++DEPT+T+ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV
Sbjct: 302 VEALPALSVDEPTVTMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSP 361
Query: 1272 DSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQ 1331
DS ++VSGRGELHL++LIENMRREG+E+ VSRP+VI K ++GE EPYEN+ D+EE +Q
Sbjct: 362 DS-FKVSGRGELHLSVLIENMRREGFEMGVSRPQVILKEVDGEKQEPYENVTFDVEEQHQ 420
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G +M+++ +R G++ N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y
Sbjct: 421 GSVMEQMGHRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHY 480
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
P + + KR+NGVLIS G + Y+L+ LQDRGRLF VYEGMIIGI+SR
Sbjct: 481 GPMKQGT---VAKRQNGVLISMVQGTCLGYALFTLQDRGRLFAKPQLEVYEGMIIGINSR 537
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
+D+ VNP K KQLTN+R+SG+D+A+ L+ ++ TLE A+EFI DDELVE+TPK+IR+RK
Sbjct: 538 SDDMTVNPTKAKQLTNVRASGTDDALTLVPAVEYTLEQALEFIEDDELVEVTPKSIRIRK 597
Query: 1512 RFLKENERKK 1521
R+L ENERK+
Sbjct: 598 RYLTENERKR 607
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKNTAIKWLD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 ARTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|84386318|ref|ZP_00989346.1| GTP-binding protein TypA/BipA [Vibrio splendidus 12B01]
gi|84378742|gb|EAP95597.1| GTP-binding protein TypA/BipA [Vibrio splendidus 12B01]
Length = 610
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 436/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I++N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAIDWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A +M PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFTVVYASALNGWATMEEGEVGTDMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A++ V + PLQ+QI L+YSSY+G IG+ R+ G +K Q V I+N K N
Sbjct: 193 AVVDTVEAPAVDLEGPLQMQISQLDYSSYVGVIGVARVTRGSVKPNQQVTIVNAEGKKRN 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R V +A +GDI+ ITG+ E+ I TICD + + L++DEPT+
Sbjct: 253 -GKVGTVLGYLGLERHEVEQANAGDIIAITGLGELKISDTICDVNNVEAMEPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEETESPDR-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+ EP+E + +D+ E +QG IM+ + R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKEEDGQKMEPFETVTIDVVEEHQGAIMESIGLRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + K RVR+++ +PSRGLIGFQ EF+T+T G+GLI H F+ Y P+ +G+R
Sbjct: 431 TDMAPDGKGRVRMDFMMPSRGLIGFQTEFLTMTSGSGLIYHSFDHYGPYKGGI---IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ Y+L+ LQ RGRLF H D VYEG +IGIH+R NDL VN +K KQL
Sbjct: 488 NNGVLISNATGKALTYALFFLQARGRLFTEHADEVYEGQVIGIHNRSNDLTVNCLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK TLE A+EFI++DELVE+TP N+R+RK+ L EN+RK+
Sbjct: 548 TNVRASGTDEAQVLSPPIKHTLEQALEFIDEDELVEVTPLNVRIRKKLLTENDRKR 603
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAIDWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|410087553|ref|ZP_11284256.1| GTP-binding protein TypA/BipA [Morganella morganii SC01]
gi|421493010|ref|ZP_15940368.1| TYPA [Morganella morganii subsp. morganii KT]
gi|455737766|ref|YP_007504032.1| GTP-binding protein TypA/BipA [Morganella morganii subsp. morganii
KT]
gi|400192638|gb|EJO25776.1| TYPA [Morganella morganii subsp. morganii KT]
gi|409765997|gb|EKN50095.1| GTP-binding protein TypA/BipA [Morganella morganii SC01]
gi|455419329|gb|AGG29659.1| GTP-binding protein TypA/BipA [Morganella morganii subsp. morganii
KT]
Length = 606
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDS ++E+ERGITI +KN +I +N
Sbjct: 10 AIIAHVDHGKTTLVDKLLQQSGTFDERSKPEERVMDSGDLERERGITILAKNTAITWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP+IY SAL+G A + +M PL+E
Sbjct: 130 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIIYASALNGIAGTDYNDMADDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KYV + + + P Q+QI L+Y++YLG IGIGRI G++K Q V +++ + K
Sbjct: 190 AIVKYVEPPQVDLDGPFQMQISQLDYNNYLGVIGIGRIKRGKVKPNQQVTVIDA-EGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GLDR+ A +GDI+ +TG+ E+ I TICD + L L +DEPT+
Sbjct: 249 NGKIGKVLGHLGLDRIETEVAEAGDIIALTGLGELNISDTICDTNCVEALKPLAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 309 SMYFCVNTSPFCGKEGKYVTSRQILDRLKKELVHNVALRVEETEDPDA-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRPRVIF+ ++G EP+E + +DIEE +QG +M L R G+L
Sbjct: 368 SVLIENMRREGFELAVSRPRVIFRDIDGRKQEPFEQVTLDIEEQHQGDVMMALGERKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + + ++G+R
Sbjct: 428 RDMMPDGKGRVRLDYSIPSRGLIGFRTEFMTMTSGTGLLYATFSHYD---DVKQGEIGRR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+IS GKAVAY+L+ LQDRG+LF+ H VYEG +IGIHSR NDL VN + K+L
Sbjct: 485 QNGVMISNGQGKAVAYALYSLQDRGKLFVGHGTEVYEGQLIGIHSRSNDLTVNCLTGKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L I+ TLE A+EFI+DDELVE+TPK+IRLRKR L EN+RK+
Sbjct: 545 TNMRASGTDEATTLTPFIEKTLEQALEFIDDDELVEVTPKSIRLRKRHLTENDRKR 600
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + F E GIT + N
Sbjct: 9 IAIIAHVDHGKTTLVDKLLQQSGTFDERSKPEERVMDSGDLERERGITILAKNTAITWND 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFANGLKPIVVI 128
Query: 176 NKIDK 180
NKID+
Sbjct: 129 NKIDR 133
>gi|421619667|ref|ZP_16060618.1| GTP-binding protein TypA [Pseudomonas stutzeri KOS6]
gi|409778279|gb|EKN57981.1| GTP-binding protein TypA [Pseudomonas stutzeri KOS6]
Length = 606
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/597 (55%), Positives = 441/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLR SGT + + N R+MDSN+ EKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQMFDLFDNLGATDEQLDFPIVYASALNGIAGMDHEKMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP K + + P Q+QI L+Y+S+LG IGIGRI G +K+ V + G D K
Sbjct: 189 AIIDHVPAPKVDLDGPFQMQISQLDYNSFLGVIGIGRIARGTVKANSPVTAI-GADGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G++E+ I T+CD + LP L +D+PT+
Sbjct: 248 NGRILKIMGHSGLQRVEVQEAEAGDIVCVSGMDELYISDTLCDQNAVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RL+ E+ +N+ LRV + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLEKELLHNVALRVEPGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPR-VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+EL+V RP VI + GE EPYEN+ +DIEE +QG +M+++ R GD
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIENEAGEKQEPYENVTIDIEEQHQGPVMEQMGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRLEY IP+RGLIGF+N F+TLT G+G+++ F Y P ++
Sbjct: 427 LSNMVPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGSGILTSTFSHYGPI---KAGEVTN 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+
Sbjct: 484 RQNGVLVSMATGTALTYSLETLQARGKLFLAPGDEIYEGQLCGINSRDNDLVLNPTKGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L N+R+SG DE I L+ PIK TLE A+EFI DDELVE+TPK+IRLRK++L EN+RK+
Sbjct: 544 LDNMRASGKDEVIALVPPIKFTLEQALEFIADDELVEVTPKSIRLRKKYLNENDRKR 600
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWNG 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+I +DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|407692973|ref|YP_006817762.1| GTP-binding protein [Actinobacillus suis H91-0380]
gi|407389030|gb|AFU19523.1| GTP-binding protein [Actinobacillus suis H91-0380]
Length = 615
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 445/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWND 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGLEHEDLAEDMTPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ +V K N P Q+QI L+Y++Y+G IGIGRI G IK Q V +++ + K
Sbjct: 193 QAIVDHVEPPKVELNAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTVTVIDS-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q+ GL R EA +GDI+ ITG+ E+ I TICD + LP L +DEPT
Sbjct: 252 RNGKVGQVLGHLGLQRYEATEAFAGDIIAITGLGELNISDTICDINNVEALPALTVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 312 VTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ NG+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIYREENGKKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 488 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRSNDLTVNCLQGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+++TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 548 LTNMRASGKDDAIVLTTPVRMTLEQALEFIDDDELVEVTPQSIRVRKRLLTENDRKR 604
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + E G I A N N
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWN 71
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|255318655|ref|ZP_05359886.1| GTP-binding protein TypA/BipA [Acinetobacter radioresistens SK82]
gi|262379120|ref|ZP_06072276.1| GTP-binding protein TypA/BipA [Acinetobacter radioresistens SH164]
gi|421465710|ref|ZP_15914397.1| GTP-binding protein TypA [Acinetobacter radioresistens WC-A-157]
gi|421857002|ref|ZP_16289359.1| GTP-binding protein TypA [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|255304337|gb|EET83523.1| GTP-binding protein TypA/BipA [Acinetobacter radioresistens SK82]
gi|262298577|gb|EEY86490.1| GTP-binding protein TypA/BipA [Acinetobacter radioresistens SH164]
gi|400203977|gb|EJO34962.1| GTP-binding protein TypA [Acinetobacter radioresistens WC-A-157]
gi|403187603|dbj|GAB75560.1| GTP-binding protein TypA [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
Length = 611
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/610 (53%), Positives = 444/610 (72%), Gaps = 11/610 (1%)
Query: 918 NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKN 977
+I L AIIAHVDHGKTTL+D LL+QSG R+MDSN +E ERGITI +KN
Sbjct: 3 DIKTLRNIAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKN 62
Query: 978 CSIEY------NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
+I + RINI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT+
Sbjct: 63 TAITWLDKRTDTTYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQ 122
Query: 1032 KALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANE 1091
KA G KPIV++NK+D+ +ARP+WV+D FDLFD L AT+EQLDFP++Y S L G A
Sbjct: 123 KAFARGLKPIVIINKVDKPSARPDWVIDQVFDLFDNLGATDEQLDFPIVYASGLRGVAGP 182
Query: 1092 NSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ + +M PLFE I+ V + + P Q+QI SL+Y+S++G IG+GRI G +K+
Sbjct: 183 SPEELAEDMTPLFETIVDIVEPPAVDVDGPFQMQISSLDYNSFVGVIGVGRIQRGSVKTN 242
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSK 1211
V +++ + K +I +I + GL+R+ V+ A +GDIV ITGI+ + I TICDP
Sbjct: 243 TPVTVID-KEGKTRNGRILKIMGYHGLERIDVDSANAGDIVCITGIDALNISDTICDPKN 301
Query: 1212 PNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHD 1271
LP L++DEPT+++ F VNNSP AGREGKF+T+R I+ RLD E+ +N+ LRV
Sbjct: 302 VEALPPLSVDEPTVSMTFQVNNSPFAGREGKFVTSRNIRERLDRELIHNVALRVEDTDSP 361
Query: 1272 DSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQ 1331
D ++VSGRGELHL++LIENMRREG+E+ VSRP+VI K ++G++ EPYEN+ D+EE +Q
Sbjct: 362 DR-FKVSGRGELHLSVLIENMRREGFEMGVSRPQVIMKEVDGQMQEPYENVTFDVEEQHQ 420
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G IM+++ R G+L N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y
Sbjct: 421 GSIMEQMGNRKGELTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTITSGTGIMTSSFSHY 480
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
P + + KR+NGVLIS +G +A++L+ LQDRGRLF VYEGMI+G++SR
Sbjct: 481 GPAKAGA---VAKRQNGVLISMVNGTCLAFALFSLQDRGRLFAEPQLEVYEGMIVGMNSR 537
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
+D++VNP K KQLTN+R+SG+DEA+ L IK TLE A+EFI DDELVE+TPK+IR+RK
Sbjct: 538 SDDMVVNPTKAKQLTNMRASGTDEALTLTPAIKFTLEQALEFIEDDELVEVTPKSIRIRK 597
Query: 1512 RFLKENERKK 1521
+FL ENERK+
Sbjct: 598 KFLTENERKR 607
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTAITWLD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 KRTDTTYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|417844436|ref|ZP_12490480.1| GTP-binding protein TypA/BipA [Haemophilus haemolyticus M21639]
gi|341956889|gb|EGT83305.1| GTP-binding protein TypA/BipA [Haemophilus haemolyticus M21639]
Length = 616
Score = 679 bits (1753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFSHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFSHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|342905005|ref|ZP_08726799.1| GTP-binding protein TypA/BipA [Haemophilus haemolyticus M21621]
gi|341952104|gb|EGT78645.1| GTP-binding protein TypA/BipA [Haemophilus haemolyticus M21621]
Length = 616
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G +K Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSVKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +PIK +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPIKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|145632234|ref|ZP_01787969.1| GTP-binding protein [Haemophilus influenzae 3655]
gi|144987141|gb|EDJ93671.1| GTP-binding protein [Haemophilus influenzae 3655]
Length = 616
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|422006614|ref|ZP_16353603.1| GTP-binding elongation factor family protein [Providencia rettgeri
Dmel1]
gi|414098830|gb|EKT60475.1| GTP-binding elongation factor family protein [Providencia rettgeri
Dmel1]
Length = 607
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/596 (55%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+ LL+QSGTF + + ++ R+MDSN++EKERGITI +KN +I++NG
Sbjct: 10 AIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD VLL++DA++GPMPQTRFVT+KA G +PIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVMSMVDCVLLVVDAMDGPMPQTRFVTQKAFDHGLRPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL+E
Sbjct: 130 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLDHENMAEDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+++V + + P Q+Q+ L+Y+SYLG IGIGRI G +K Q V +++ + K
Sbjct: 190 AIVEHVAPPAVDIDGPFQMQVSQLDYNSYLGVIGIGRIKRGVVKPNQQVTVIDS-EGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GL+R+ +A +GDIV +TG+ E+ I TIC LP L +DEPT+
Sbjct: 249 NGKIGKVLTHLGLERIDSQQAEAGDIVALTGLGELNISDTICQVGSVEALPALAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ + VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 309 SMFYCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETQDPDA-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+E + +D+EE +QG IM+ L R GDL
Sbjct: 368 SVLIENMRREGFELAVSRPKVIIREIDGRKQEPFEQVTLDVEEQHQGDIMKALGERKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G R
Sbjct: 428 RDMMPDGKGRVRLDYVIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGGR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K L
Sbjct: 485 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKXL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK+TLE A+EFI+DDELVE+TP++IRLRKR L EN+R++
Sbjct: 545 TNMRASGTDEATTLSPPIKMTLEQALEFIDDDELVEVTPQSIRLRKRHLTENDRRR 600
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+ + + + F E + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVMSMVDCVLLVVDAMDGPMPQTRFVTQKAFDHGLRPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|253987663|ref|YP_003039019.1| gtp-binding protein typa/bipa (tyrosine phosphorylated protein a)
[Photorhabdus asymbiotica]
gi|211638570|emb|CAR67190.1| gtp-binding protein typa/bipa (tyrosine phosphorylated protein a)
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253779113|emb|CAQ82273.1| gtp-binding protein typa/bipa (tyrosine phosphorylated protein a)
[Photorhabdus asymbiotica]
Length = 613
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 15 AIIAHVDHGKTTLVDKLLQQSGTFGDRATATERVMDSNDLEKERGITILAKNTAIKWNDY 74
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 75 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAHGLKPIVVIN 134
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + + +M PL++
Sbjct: 135 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGIAGTDHEDMAEDMTPLYQ 194
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V K + N Q+QI L+Y++Y+G IGIGRI G +K Q+V I++ + K
Sbjct: 195 AIVDHVEPPKVDLNGAFQMQISQLDYNNYVGVIGIGRIKRGTVKPNQNVTIIDS-EGKTR 253
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ +A +GDI+ ITG+ E+ I T+CD + LP L +DEPT+
Sbjct: 254 NGKVGKVLGHLGLERIESEQAEAGDIIAITGLGELNISDTLCDTNAVEALPPLAVDEPTV 313
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP GREGK++T+RQI RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 314 SMYFCVNTSPFCGREGKYVTSRQILERLKKELVHNVALRVEETEDPDA-FRVSGRGELHL 372
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+E + +DIEE +QG +MQ L R DL
Sbjct: 373 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFEQVTLDIEEQHQGDVMQALGERKADL 432
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 433 RDMLPDGKGRVRLDYVIPSRGLIGFRTEFMTMTSGTGLLYATFSHYD---DIRPGEIGRR 489
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+IS GKAVAY+L+ LQDRG+LF+ H VYEG +IGIHSR NDL VN + K+L
Sbjct: 490 QNGVMISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQVIGIHSRSNDLTVNCLTGKKL 549
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L IK TLE A+EFI+DDELVE+TP +IRLRKR+L ENER++
Sbjct: 550 TNVRASGTDEATTLSPHIKKTLEQALEFIDDDELVEVTPVSIRLRKRYLTENERRR 605
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + T+ + N + IT L
Sbjct: 14 IAIIAHVDHGKTTLVDKLLQQSGTFGDRATATERVMDSNDLEKERGITILAKNTAIKWND 73
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 176 NKIDK 180
NK+D+
Sbjct: 134 NKVDR 138
>gi|417843170|ref|ZP_12489247.1| GTP-binding protein TypA/BipA [Haemophilus haemolyticus M21127]
gi|341950404|gb|EGT76993.1| GTP-binding protein TypA/BipA [Haemophilus haemolyticus M21127]
Length = 616
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|21672685|ref|NP_660752.1| GTP-binding protein BipA [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25009501|sp|Q8K9C8.1|TYPA_BUCAP RecName: Full=GTP-binding protein TypA/BipA homolog
gi|21623324|gb|AAM67963.1| GTP-binding protein typa/bipa [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 609
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/596 (56%), Positives = 447/596 (75%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF+K++ RIMDSN++EKERGITI SKN SI++
Sbjct: 9 AIIAHVDHGKTTLLDQLLQQSGTFQKHEEKKERIMDSNDLEKERGITILSKNTSIKWKEY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA K G PIVV+N
Sbjct: 69 KINIVDTPGHADFGGEVERVMSMVDSVLLIVDALDGPMPQTRFVTKKAFKYGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR N+RP+WV++ FDLF L A ++QLDFP+IYTSA+ G + N + NMIPL+E
Sbjct: 129 KIDRKNSRPDWVINEIFDLFVNLNANDKQLDFPIIYTSAILGTSGINYLDMKENMIPLYE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+KY P + N Q+QI L+Y++YLG IG+GRI G IK VVI++ + N
Sbjct: 189 AIIKYAPAPNVDPNQKFQMQISQLDYNNYLGVIGVGRIKQGHIKPNDSVVIIDSLGNTRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KIN++ + GL R+ + + +GDI+ ITG+ ++ I TIC P LP L IDEPT+
Sbjct: 249 -GKINKVLNYFGLKRLEIQKGDAGDIIAITGLNKLNISDTICHPDNLCPLPPLIIDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP +G+EGK+IT+RQI RL E +N+ L+V + K D +I+ VSGRGELHL
Sbjct: 308 NMFFSVNTSPFSGKEGKYITSRQILERLKKETIHNVALQVKETK-DANIFSVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL VSRP++IF+ +N EP+EN+ +DIEE +QG IM+ + R G+L
Sbjct: 367 SILIENMRREGFELEVSRPKIIFREINDIKQEPFENIILDIEEKHQGNIMKFIGERKGEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KNI ++ +R+RLEY + SR LIGF+ EF+++T GTGL F Y + K D+G+R
Sbjct: 427 KNITVDPNKRIRLEYLLSSRALIGFRTEFMSITSGTGLFYSSFSHYQKY---QKNDIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS +G AVA++L+ LQ+RG+LF+ H VYEG IIG+H+R NDL VN + K+L
Sbjct: 484 KNGVLISNSTGMAVAFALFNLQERGKLFLGHGTQVYEGQIIGLHNRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEAI L + K TLE A+ FINDDELVEITPK+IRLRKR+LKENERKK
Sbjct: 544 TNMRASGTDEAIILTTFTKFTLEEALSFINDDELVEITPKSIRLRKRYLKENERKK 599
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 107/241 (44%), Gaps = 26/241 (10%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+LLD + + + F + + I N + IT L
Sbjct: 8 IAIIAHVDHGKTTLLDQLLQQSGTFQKHEEKKERIMDSNDLEKERGITILSKNTSIKWKE 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YKINIVDTPGHADFGGEVERVMSMVDSVLLIVDALDGPMPQTRFVTKKAFKYGLNPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLIS--EQVIPEEYGGASPFISISAKTGV-GINKL--LEN-ISLQ 229
NKID+ + D + ++ + + P I SA G GIN L EN I L
Sbjct: 128 NKIDRKNSRPDWVINEIFDLFVNLNANDKQLDFPIIYTSAILGTSGINYLDMKENMIPLY 187
Query: 230 AEILELK-APVTTPAKGVIIE-SRLDKGK--GPVATVLIQSGTLRCSDIVVAGASYGRIR 285
I++ AP P + ++ S+LD G + I+ G ++ +D VV S G R
Sbjct: 188 EAIIKYAPAPNVDPNQKFQMQISQLDYNNYLGVIGVGRIKQGHIKPNDSVVIIDSLGNTR 247
Query: 286 S 286
+
Sbjct: 248 N 248
>gi|119947085|ref|YP_944765.1| GTP-binding virulence regulator protein BipA [Psychromonas ingrahamii
37]
gi|119865689|gb|ABM05166.1| GTP-binding virulence regulator protein BipA [Psychromonas ingrahamii
37]
Length = 607
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/596 (55%), Positives = 436/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I +N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLDSRGGAEERVMDSNDLEKERGITILAKNTAIVWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVERILSMVD+V L++DAV+GPMPQTRFVT+KA G KPIVVVN
Sbjct: 70 HINIVDTPGHADFGGEVERILSMVDSVCLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVVN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+D++ ARPEWV+D FDLFD L AT+EQLDF ++Y SA++G+A+++ + M PLF+
Sbjct: 130 KVDKAGARPEWVIDQVFDLFDNLGATDEQLDFQIVYASAINGWASKDMETESDTMEPLFQ 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + Q+QI L+++SY+G IG+GRI G +K Q V ++ G D K
Sbjct: 190 TIVDSVEAPDADRDGDFQMQISQLDHNSYVGVIGVGRITRGSVKVNQQVTVI-GADGKKR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ Q+ + GL+R V A +GDIV I+G+ E+ I T+C + LP L +DEPT+
Sbjct: 249 NAKVGQVLGYLGLERNDVEVAEAGDIVAISGLGELKISDTVCAQNNVEALPPLTVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP G+EGKF+T+R I +RL E+ +N+ L+V + D ++VSGRGELHL
Sbjct: 309 TMTFQVNNSPFCGKEGKFVTSRNILDRLHKELVHNVALKVEETADPDK-FKVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI + ++G+L EPYE L VD+EE +QG +M++L R +L
Sbjct: 368 GILIENMRREGYELAVSRPEVIERLVDGQLQEPYETLTVDVEEQSQGSVMEQLGVRKAEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRL++ IPSRGLIGFQ EF+TLT G+GL+ H F+ Y P + +G+R
Sbjct: 428 TNMMPDGKGRVRLDFVIPSRGLIGFQTEFMTLTSGSGLLYHSFDHYGPHKGGT---IGQR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI +GKAV YSL+ LQDRGRLF+ H VYEG IIGIH+R NDL VN ++ K L
Sbjct: 485 QNGVLICNQTGKAVTYSLFFLQDRGRLFLGHATEVYEGQIIGIHNRANDLTVNCVRGKSL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+RSSG+DEA L I +TLE A+EFI+ DELVE+TPK+IR+RK+ L ENERK+
Sbjct: 545 TNVRSSGTDEAQTLSPEIILTLEQALEFIDVDELVEVTPKSIRIRKKLLSENERKR 600
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN----------------VVTNH 115
+ I+ HVDHGKT+L+D + + + GG + + N +V N
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLDSRGGAEERVMDSNDLEKERGITILAKNTAIVWND 68
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V L+V A DG MPQTR A G+ IV +
Sbjct: 69 YHINIVDTPGHADFGGEVERILSMVDSVCLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVV 128
Query: 176 NKIDK 180
NK+DK
Sbjct: 129 NKVDK 133
>gi|410622646|ref|ZP_11333476.1| GTP-binding protein TypA/BipA [Glaciecola pallidula DSM 14239 = ACAM
615]
gi|410157774|dbj|GAC28850.1| GTP-binding protein TypA/BipA [Glaciecola pallidula DSM 14239 = ACAM
615]
Length = 609
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 439/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 12 AIIAHVDHGKTTLVDKLLQQSGTLESRGVAEERVMDSNDIEKERGITILAKNTAINWNEY 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 72 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +RP+WV+D FDLFD L AT+EQLDF VIY SA++G+A + +M PLF+
Sbjct: 132 KIDKPGSRPDWVIDQVFDLFDNLGATDEQLDFQVIYASAINGWATMDYNVPSDSMTPLFQ 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + PLQ+QI L+++SY+G IG+GRI G ++ Q V ++N +K N
Sbjct: 192 AIVDQVEPPNGDPAAPLQMQISQLDHNSYVGVIGVGRITRGTVRVNQQVTVVNAKGEKRN 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ + GL+R + A +GDIV ITG+ E+ I T+CD + L L++DEPT+
Sbjct: 252 -GKIGKVLGYLGLERHDIESADAGDIVAITGLGELKISDTVCDVNNVVALKPLSVDEPTV 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + V+GRGELHL
Sbjct: 311 IMTFQVNTSPFAGKEGKYVTSRNILERLQDELVHNVALRVEEMADPDK-FRVAGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI KT++G+L EP+E L +D+EE +QG ++++L R G++
Sbjct: 370 GILIENMRREGYELAVSRPEVILKTVDGKLMEPFETLTIDVEEQHQGTMIEQLGKRKGEM 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R R+++ IPSRGLIGFQ +F+TLT G+GLI H F+ Y P D+G R
Sbjct: 430 TNMTPDGKGRTRVDFIIPSRGLIGFQTDFMTLTSGSGLIYHSFDHYGPHKGG---DIGTR 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL++ +GKA+ +++ LQ+RGR+FI H VYEGMIIGIHSR+NDL VN +K KQL
Sbjct: 487 KNGVLVANATGKALTNAIFNLQERGRMFIGHGIEVYEGMIIGIHSRENDLTVNALKGKQL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PI TLE A+EFI+DDELVE+TP +IRLRK+ L ENERK+
Sbjct: 547 TNVRASGTDEAQTLVPPIVYTLEQALEFIDDDELVEVTPLSIRLRKKLLSENERKR 602
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 11 IAIIAHVDHGKTTLVDKLLQQSGTLESRGVAEERVMDSNDIEKERGITILAKNTAINWNE 70
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 71 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 130
Query: 176 NKIDK 180
NKIDK
Sbjct: 131 NKIDK 135
>gi|343507163|ref|ZP_08744609.1| GTP-binding protein [Vibrio ichthyoenteri ATCC 700023]
gi|343515658|ref|ZP_08752710.1| GTP-binding protein [Vibrio sp. N418]
gi|342798089|gb|EGU33722.1| GTP-binding protein [Vibrio sp. N418]
gi|342800347|gb|EGU35874.1| GTP-binding protein [Vibrio ichthyoenteri ATCC 700023]
Length = 610
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/598 (56%), Positives = 441/598 (73%), Gaps = 8/598 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARPEWV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPEWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLEEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
A++ V + + PLQ+QI L+YSSY+G IG+ R+ G +++ Q V I++ K N
Sbjct: 193 AVVDTVDAPNVDLDGPLQMQISQLDYSSYVGVIGVARVTRGSVRANQQVTIVSADGSKRN 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL+R + +A +GDI+ ITG+ E+ I TICD + + L++DEPT+
Sbjct: 253 -GKVGTVMGYLGLNRHEIEQANAGDIIAITGLGELKISDTICDQNAVEAMTPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL E+ +N+ LRV + + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLQKELVHNVALRVEETDNPDR-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIF-KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
+ILIENMRREG+EL+VSRP VI K NG+L EP+E + +D+ E +QG IM+K+ R G+
Sbjct: 371 SILIENMRREGFELAVSRPEVIIKKDENGDLSEPFEVVTIDVMEEHQGGIMEKIGLRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L ++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +G
Sbjct: 431 LTDMAPDGKGRVRMDFMMPSRGLIGFQTEFMTLTSGSGLLYHTFDHYGPHKGGV---IGM 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS +GKA+ Y+L+ LQDRGRLF H D VYEG +IGIH+R NDL VN +K KQ
Sbjct: 488 RNNGVLISNATGKALTYALFNLQDRGRLFTEHADEVYEGQVIGIHNRSNDLTVNCLKGKQ 547
Query: 1465 LTNIRSSGSDEAIQLISP-IKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG+DEA Q++SP IK TLE A+EFI++DELVE+TP++IR+RKR L EN+RK+
Sbjct: 548 LTNVRASGTDEA-QVLSPAIKYTLEQALEFIDEDELVEVTPESIRIRKRHLTENDRKR 604
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLESRGEAEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 131
Query: 176 NKIDK 180
NKID+
Sbjct: 132 NKIDR 136
>gi|50118993|ref|YP_048160.1| GTP-binding regulatory protein [Pectobacterium atrosepticum SCRI1043]
gi|49609519|emb|CAG72952.1| GTP-binding regulatory protein [Pectobacterium atrosepticum SCRI1043]
Length = 607
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/596 (54%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALNGIAGLDHNDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++Y+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVSPPLVEMDAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQVTIVDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ EA +GDI+ ITG+ E+ I TICDP LP L++DEPT+
Sbjct: 248 NGKVGKVLTHLGLERIDATEAEAGDIIAITGLGELNISDTICDPQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMFFNVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVDETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRVIDGRNQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRQGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLVSNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP+++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSVRIRKRHLTENDRKR 599
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|419839408|ref|ZP_14362815.1| GTP-binding protein TypA [Haemophilus haemolyticus HK386]
gi|386909268|gb|EIJ73943.1| GTP-binding protein TypA [Haemophilus haemolyticus HK386]
Length = 616
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDIAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|190149322|ref|YP_001967847.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|189914453|gb|ACE60705.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
Length = 653
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 447/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 51 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWND 110
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 111 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 170
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PLF
Sbjct: 171 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGLEHEDLAEDMTPLF 230
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ +V K N P Q+QI L+Y++Y+G IGIGRI G IK Q V +++ + K
Sbjct: 231 QAIVDHVEPPKVELNAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTVTVIDS-EGKT 289
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R +EA +GDI+ ITG+ E+ I TICD + LP L++DEPT
Sbjct: 290 RNGKIGQVLGHLGLQRYEASEAFAGDIIAITGLGELNISDTICDINNVEALPALSVDEPT 349
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 350 VSMFFCVNTSPFCGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 408
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ NG+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 409 LSVLIENMRREGYELAVSRPKVIYREENGKKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 468
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 469 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 525
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 526 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRGNDLTVNCLQGKK 585
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K+TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 586 LTNMRASGKDDAIVLTTPVKMTLEQALEFIDDDELVEVTPQSIRVRKRLLTENDRKR 642
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 56 EYNKNITAESLVRAPI--VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH-------- 105
+ NK+I+ ++L + + I+ HVDHGKT+L+D + + + E G
Sbjct: 32 QLNKDISMQNLDINKLRNIAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDL 91
Query: 106 -------IGAYNVVTNHGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQ 156
I A N N I +DTPGH F R + D V+LVV A DG MPQ
Sbjct: 92 EKERGITILAKNTAINWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQ 151
Query: 157 TREAIAHAKISGVPLIVAINKIDK 180
TR A G+ IV INK+D+
Sbjct: 152 TRFVTQKAFAHGLKPIVVINKVDR 175
>gi|332289857|ref|YP_004420709.1| GTP-binding protein [Gallibacterium anatis UMN179]
gi|330432753|gb|AEC17812.1| GTP-binding protein [Gallibacterium anatis UMN179]
Length = 617
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/609 (55%), Positives = 452/609 (74%), Gaps = 7/609 (1%)
Query: 915 SDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQN--INARIMDSNEIEKERGIT 972
+D +I L AIIAHVDHGKTTL+D LL+QSGT +++ + R+MDSN +EKERGIT
Sbjct: 3 NDLDISKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESSRSGETDERVMDSNALEKERGIT 62
Query: 973 IFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRK 1032
I +KN +I +N RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA +GPMPQTRFVT+K
Sbjct: 63 ILAKNTAINWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAFDGPMPQTRFVTQK 122
Query: 1033 ALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANEN 1092
A G KPIVV+NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A +
Sbjct: 123 AFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLD 182
Query: 1093 SKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQ 1152
+M PLFEAI+KYV + + + P Q+QI L+Y++Y+G IGIGRI G +K Q
Sbjct: 183 HDQLADDMTPLFEAIVKYVAPPEVHLDQPFQMQISQLDYNNYVGVIGIGRIKRGSVKPNQ 242
Query: 1153 DVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKP 1212
V I++ + K A++ Q+ GL R + A +GDI+ +TG+ E+ I TICD +
Sbjct: 243 AVTIIDS-EGKTRNARVGQVLGHLGLQRYEEDIANAGDIIALTGLGELNISDTICDVNNV 301
Query: 1213 NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDD 1272
LP L +DEPT+T+ F VN SP GREGK++T+RQI RL+ E+ +N+ LRV + + D
Sbjct: 302 EALPALTVDEPTVTMFFCVNTSPFCGREGKYVTSRQILERLNKELVHNVALRVEETEDPD 361
Query: 1273 SIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQG 1332
+ ++VSGRGELHL++LIENMRREGYEL+VSRP+VIF+ ++G EP+E + +DIE+ +QG
Sbjct: 362 A-FKVSGRGELHLSVLIENMRREGYELAVSRPKVIFREIDGRKQEPFEQVTIDIEDQHQG 420
Query: 1333 IIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYA 1392
+M+ L R G+++++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y
Sbjct: 421 AVMEALGIRKGEVRDMVPDGKGRTRLEYIIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD 480
Query: 1393 PFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRD 1452
+ D+G+R+NGVLIS +GKA+AY+L+ LQ+RG+L I H VYEG +IGIHSR
Sbjct: 481 ---DVKPGDIGQRQNGVLISNATGKALAYALFGLQERGKLMIEHGAEVYEGQVIGIHSRS 537
Query: 1453 NDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKR 1512
NDL VN ++ K+LTN+R++G D+AI L+ P+K TLE A+EFI+DDELVE+TP +IR+RKR
Sbjct: 538 NDLTVNCLQGKKLTNMRAAGKDDAIVLVPPVKFTLEQALEFIDDDELVEVTPSSIRIRKR 597
Query: 1513 FLKENERKK 1521
FL E +R++
Sbjct: 598 FLTEMDRRR 606
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF--SEAGGITQHIGAYNVVTNHGSITFL-------- 121
+ I+ HVDHGKT+L+D + + + S +G + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLESSRSGETDERVMDSNALEKERGITILAKNTAINW 72
Query: 122 --------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
DTPGH F R + D V+L+V A DG MPQTR A G+ IV
Sbjct: 73 NDYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAFDGPMPQTRFVTQKAFAHGLKPIV 132
Query: 174 AINKIDK 180
INK+D+
Sbjct: 133 VINKVDR 139
>gi|421263920|ref|ZP_15714931.1| hypothetical protein KCU_06156 [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401688877|gb|EJS84412.1| hypothetical protein KCU_06156 [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 616
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 439/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQN-INARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT ++N + R+MDSN+IEKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTLEASRNESDERVMDSNDIEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SMVD VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMVDCVLLIVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHDDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K P Q+QI L+Y+SY+G IGIGRI G +K Q V I++ + K
Sbjct: 194 EAIVKHVEPPKVELEQPFQMQISQLDYNSYVGVIGIGRIKRGSVKPNQTVSIIDS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R A +GDI+ ITG+ E+ I TICD + GLP L++DEPT
Sbjct: 253 RTGKIGQVLGHLGLQRYETERAYAGDIIAITGLGELNISDTICDINHVEGLPALSVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDPDA-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRPRVI+K ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPRVIYKEVDGRKQEPFEQVTIDIEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+
Sbjct: 432 VRDMVPDGKGRTRLEYNIPSRGLIGFRGEFMTMTSGTGLLYSSFSHYDDI---KPGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I H VYEG IIGIHSR NDL VN + K+
Sbjct: 489 RKNGVLISNATGKALAYALFSLQERGKLMIEHGTEVYEGQIIGIHSRSNDLTVNCLTGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG DEA+ L+ P++ +LE AIEFI+DDELVE+TP +IR+RK+ L E +RK+
Sbjct: 549 LTNMRASGKDEAVVLVPPVRFSLEQAIEFIDDDELVEVTPSSIRIRKKLLTETDRKR 605
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG-----------------GITQHIGAYNVVTN 114
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLEASRNESDERVMDSNDIEKERGIT--ILAKNTAIN 70
Query: 115 HGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLI 172
I +DTPGH F R + D V+L+V A DG MPQTR A G+ I
Sbjct: 71 WNDYRINIVDTPGHADFGGEVERVMSMVDCVLLIVDAFDGPMPQTRFVTQKAFAHGLKPI 130
Query: 173 VAINKIDK 180
V INK+D+
Sbjct: 131 VVINKVDR 138
>gi|307262635|ref|ZP_07544265.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|306872058|gb|EFN03772.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 615
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 447/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWND 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGLEHEDLAEDMTPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ +V K N P Q+QI L+Y++Y+G IGIGRI G IK Q V +++ + K
Sbjct: 193 QAIVDHVEPPKVELNAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTVTVIDS-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R +EA +GDI+ ITG+ E+ I TICD + LP L++DEPT
Sbjct: 252 RNGKIGQVLGHLGLQRYEASEAFAGDIIAITGLGELNISDTICDINNVEALPALSVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 312 VSMFFCVNTSPFCGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ NG+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIYREENGKKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 488 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRGNDLTVNCLQGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K+TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 548 LTNMRASGKDDAIVLTTPVKMTLEQALEFIDDDELVEVTPQSIRVRKRLLTENDRKR 604
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + E G I A N N
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWN 71
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|378697065|ref|YP_005179023.1| GTP-binding protein [Haemophilus influenzae 10810]
gi|301169583|emb|CBW29184.1| GTP-binding protein [Haemophilus influenzae 10810]
Length = 616
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKYVESPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y ++G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---EIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|383192252|ref|YP_005202380.1| GTP-binding protein TypA/BipA [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371590510|gb|AEX54240.1| GTP-binding protein TypA/BipA [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 607
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/598 (54%), Positives = 445/598 (74%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGNDHNDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++Y+G IGIGRI G +K Q V +++ + K
Sbjct: 189 AIVDHVSPPQVEMEAPFQMQISQLDYNNYVGVIGIGRIKRGTVKPNQQVTVIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICDP+ LP L++DEPT+
Sbjct: 248 NGKVGKVLTHMGLERIEATVAEAGDIIAITGLGELNISDTICDPANVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPLSVRIRKRHLTENDRKRAM 601
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|269468819|gb|EEZ80423.1| membrane GTPase [uncultured SUP05 cluster bacterium]
Length = 606
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/600 (55%), Positives = 446/600 (74%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QS TF + R+MDSN++EKERGITI SKN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLEQSQTFDDRFESSERMMDSNDLEKERGITISSKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT+KA G PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTKKAFDQGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP WV+D FDLFD+L AT+EQLDFP+IY S+++GYA+ R+G+M P+FE
Sbjct: 129 KIDKDAARPNWVIDQVFDLFDQLGATDEQLDFPIIYASSINGYASLEDNVREGDMTPMFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K+V + N PLQ+QI +L+YSS++G IGIGRI G IK VV+ + K
Sbjct: 189 TIVKHVKAPDVDVNAPLQMQITALDYSSFVGAIGIGRITRGTIKKNMQVVVADA-QGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAK+ ++ F GLD++ N A +GDI I GIE I I TICDP LP L++DEPT+
Sbjct: 248 KAKVANLQSFLGLDKIDTNSAEAGDIAAIIGIEGISISDTICDPETIEALPPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG++GK+IT+R I++RLD E+ N+ LRV +N D S + VSGRGELHL
Sbjct: 308 SMAFRVNDSPFAGQDGKYITSRNIRDRLDKELIYNVALRV-ENTEDPSEFIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRREG+EL+V RP+VI K ++G + EP+E+L VD+E +QG +M+KL R +L
Sbjct: 367 SILIETMRREGFELAVGRPQVILKEIDGVICEPFEDLSVDVETQHQGTVMEKLGERKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + RV+L++ IP+RGLIGF+ +F+T T GTGL++ F+ Y P + ++G+R
Sbjct: 427 TNMMPDGNGRVKLDFDIPARGLIGFRTDFLTATTGTGLMNSTFDGYKP---QKPGNIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NG LIS GKAVAY+++ LQ G+ F+ HN +YEGM++GIH+RD DL++N +K KQL
Sbjct: 484 SNGSLISMNQGKAVAYAIFNLQKSGKFFVEHNTDIYEGMVVGIHTRDKDLVINVMKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEA+ L I++ LE A+EFI+DDELVE+TP NIR+RKR L E RK+ +K
Sbjct: 544 TNVRASGTDEAVVLTPAIRLDLEQALEFIDDDELVEVTPHNIRIRKRVLGETARKRVRNK 603
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 102/245 (41%), Gaps = 36/245 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSE----------------AGGITQHIGAYNVVTNH 115
V I+ HVDHGKT+L+D + + + F + GIT + N
Sbjct: 8 VAIIAHVDHGKTTLVDKLLEQSQTFDDRFESSERMMDSNDLEKERGITISSKNTAIKWND 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTKKAFDQGLNPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQVIP--EEYGGASP---FISISAKTGVGINKLLENIS--- 227
NKIDK D + + + +QV ++ G F I A + G L +N+
Sbjct: 128 NKIDK-----DAARPNWVIDQVFDLFDQLGATDEQLDFPIIYASSINGYASLEDNVREGD 182
Query: 228 ----LQAEILELKAP---VTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGAS 280
+ + +KAP V P + I G + I GT++ + VV +
Sbjct: 183 MTPMFETIVKHVKAPDVDVNAPLQMQITALDYSSFVGAIGIGRITRGTIKKNMQVVVADA 242
Query: 281 YGRIR 285
G+ R
Sbjct: 243 QGKTR 247
>gi|145629936|ref|ZP_01785718.1| GTP-binding protein [Haemophilus influenzae R3021]
gi|145640980|ref|ZP_01796562.1| GTP-binding protein [Haemophilus influenzae R3021]
gi|144984217|gb|EDJ91640.1| GTP-binding protein [Haemophilus influenzae R3021]
gi|145274494|gb|EDK14358.1| GTP-binding protein [Haemophilus influenzae 22.4-21]
Length = 616
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|229845916|ref|ZP_04466028.1| aminopeptidase B [Haemophilus influenzae 7P49H1]
gi|229810920|gb|EEP46637.1| aminopeptidase B [Haemophilus influenzae 7P49H1]
Length = 615
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEELAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y D+G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---DIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|261344482|ref|ZP_05972126.1| GTP-binding protein TypA/BipA [Providencia rustigianii DSM 4541]
gi|282567389|gb|EFB72924.1| GTP-binding protein TypA/BipA [Providencia rustigianii DSM 4541]
Length = 607
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/596 (54%), Positives = 442/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+ LL+QSGTF + + ++ R+MDSN++EKERGITI +KN +I++NG
Sbjct: 10 AIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVMSMVDCVLLVVDAMDGPMPQTRFVTQKAFDHGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL G A +M PL++
Sbjct: 130 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALMGIAGLEHTDMAEDMTPLYQ 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V K + + P Q+Q+ L+Y+SYLG IGIGRI G +K Q V +++ + K
Sbjct: 190 AIVDHVEPPKVDLDGPFQMQVSQLDYNSYLGVIGIGRIKRGVVKPNQQVTVIDS-EGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GL+R+ +A +GDIV +TG+ E+ I TIC LP L +DEPT+
Sbjct: 249 NGKIGKVLTHLGLERIDSQQAEAGDIVALTGLGELNISDTICQVGSVEALPALAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ + VN SP G+EGK++T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 309 SMFYCVNTSPFCGKEGKYVTSRQILDRLHKELVHNVALRVEETQDPDA-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+E + +D+EE +QG +M+ L R GDL
Sbjct: 368 SVLIENMRREGFELAVSRPKVIFREVDGRKQEPFEQVTLDVEEQHQGDVMKALGERKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+ + + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G R
Sbjct: 428 RGMMPDGKGRVRLDYIIPSRGLIGFRTEFMTMTSGTGLLYSSFSHYD---DVRPGEIGGR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 485 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK++LE A+EFI+DDELVE+TP++IRLRKR L EN+R++
Sbjct: 545 TNMRASGTDEATTLSPPIKMSLEQALEFIDDDELVEVTPQSIRLRKRHLTENDRRR 600
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+ + + + F E + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVMSMVDCVLLVVDAMDGPMPQTRFVTQKAFDHGLKPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|424742477|ref|ZP_18170799.1| GTP-binding protein TypA [Acinetobacter baumannii WC-141]
gi|422944093|gb|EKU39098.1| GTP-binding protein TypA [Acinetobacter baumannii WC-141]
Length = 611
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/606 (53%), Positives = 439/606 (72%), Gaps = 11/606 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL+QSG R+MDSN +E ERGITI +KN SI +
Sbjct: 11 AIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTSITWLDK 70
Query: 983 ---NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT+KA G K
Sbjct: 71 RTDTTYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGLK 130
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIV++NK+D+ +ARP+WV+D FDLFD L AT+EQLDFPV+Y S L G A + + +
Sbjct: 131 PIVIINKVDKPSARPDWVIDQVFDLFDNLGATDEQLDFPVVYASGLRGVAGPSPEELAED 190
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLFE I+ V ++ P Q+QI SL+Y+S++G IG+GRI G +K V +++
Sbjct: 191 MTPLFETIVDIVEPPAVDAEGPFQMQISSLDYNSFVGVIGVGRIQRGSVKLNTPVTVIDK 250
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+ N +I +I + GL+R+ V+ A +GDIV ITGI+ + I TICDP LP L+
Sbjct: 251 EGNTRN-GRILKIMGYHGLERIDVDSASAGDIVCITGIDALNISDTICDPKNVEALPALS 309
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPT+++ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV D ++VSG
Sbjct: 310 VDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSPDR-FKVSG 368
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RGELHL++LIENMRREG+E+ VSRP+VI K ++G+ EPYEN+ D+EE +QG +M+++
Sbjct: 369 RGELHLSVLIENMRREGFEMGVSRPQVIMKEIDGQKQEPYENVTFDVEEQHQGAVMEQMG 428
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
+R G++ N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y P +
Sbjct: 429 FRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHYGPAKQGT- 487
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
+ KR+NGVLIS G + Y+L+ LQDRGRLF VYEGMIIGI+SR +D++VNP
Sbjct: 488 --VAKRQNGVLISMVQGTCLGYALFTLQDRGRLFAKPQLEVYEGMIIGINSRSDDMVVNP 545
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
K KQLTN+R+SG+DEA+ L ++ TLE A+EFI DDELVE+TPK+IR+RKR+L ENER
Sbjct: 546 TKAKQLTNVRASGTDEALTLTPAMEYTLEQALEFIEDDELVEVTPKSIRIRKRYLTENER 605
Query: 1520 KKKLHK 1525
K+ K
Sbjct: 606 KRNRDK 611
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTSITWLD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 KRTDTTYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|93005203|ref|YP_579640.1| GTP-binding protein TypA [Psychrobacter cryohalolentis K5]
gi|92392881|gb|ABE74156.1| GTP-binding protein TypA [Psychrobacter cryohalolentis K5]
Length = 615
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/602 (54%), Positives = 447/602 (74%), Gaps = 11/602 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL QSGTF NI R MDS +IE+ERGITI +KN +I +
Sbjct: 12 AIIAHVDHGKTTLVDKLLHQSGTFGDRANIAERAMDSGDIEQERGITILAKNTAIRWTDN 71
Query: 983 -NGT--RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
+GT RINI+DTPGHADFGGEVER++SMVD VLL++DAV+GPMPQTRFVT+KA + G K
Sbjct: 72 TDGTEYRINIVDTPGHADFGGEVERVMSMVDCVLLVVDAVDGPMPQTRFVTQKAFEQGLK 131
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIVV+NKIDR +RP+WV+D FDLFD L AT+EQLDFPV+Y SAL+G A + +
Sbjct: 132 PIVVINKIDRPGSRPDWVMDQIFDLFDNLGATDEQLDFPVVYASALNGIAGLEADDLADD 191
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLF+ I+ V + +++ P ++QI SL+Y+S++G IGIGRI G++K+ V +++
Sbjct: 192 MTPLFKTIVDVVQAPQVDADAPFRMQISSLDYNSFVGVIGIGRIQRGKVKTNTQVTVIDK 251
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+ N +I +I + GLDR+ V +A +GDIV ITGI+ + I TICDPS LP L
Sbjct: 252 NGNTRN-GRILKIMGYHGLDRIDVEDAQAGDIVCITGIDSLNISDTICDPSAVEALPALT 310
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPT+++NF VNNSP AGR+GKF+T+R I+ RL+ E+ +N+ LRV + D ++VSG
Sbjct: 311 VDEPTVSMNFQVNNSPFAGRDGKFVTSRNIRERLERELIHNVALRVEDTESPDK-FKVSG 369
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RGELHL++LIENMRREG+E+ VS P VI K ++G+L EPYEN+ DIE+ +QG IM+++
Sbjct: 370 RGELHLSVLIENMRREGFEMGVSGPEVIVKEVDGKLQEPYENVVFDIEDAHQGPIMEQVG 429
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
R G++ N+E++ K R+R+E +P+RGLIGF++EF+TLT GTG+++ F Y P +
Sbjct: 430 LRKGEMTNMELDGKGRMRIEATMPARGLIGFRSEFLTLTSGTGIMTSSFSHYGP---QKV 486
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
++G R NGVL+S G + ++L+ LQ RG+LF VYEGMIIG++SR++D+ VNP
Sbjct: 487 GEVGARSNGVLVSMAKGVCLGFALFNLQKRGKLFAEPQLEVYEGMIIGLNSRNDDMAVNP 546
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
KQLTN+R+SG+DEA+ L +K TLE A+EFI DDELVE+TPK IR+RKR+L E+ER
Sbjct: 547 TTGKQLTNVRASGTDEALTLTPAVKFTLEQALEFIQDDELVEVTPKAIRIRKRYLTESER 606
Query: 1520 KK 1521
K+
Sbjct: 607 KR 608
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 60/131 (45%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSE----------AGGITQHIGAYNVVTNHG----- 116
+ I+ HVDHGKT+L+D + + F + +G I Q G + N
Sbjct: 11 IAIIAHVDHGKTTLVDKLLHQSGTFGDRANIAERAMDSGDIEQERGITILAKNTAIRWTD 70
Query: 117 -------SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
I +DTPGH F R + D V+LVV A DG MPQTR A G+
Sbjct: 71 NTDGTEYRINIVDTPGHADFGGEVERVMSMVDCVLLVVDAVDGPMPQTRFVTQKAFEQGL 130
Query: 170 PLIVAINKIDK 180
IV INKID+
Sbjct: 131 KPIVVINKIDR 141
>gi|346642677|ref|YP_257532.2| GTP-binding protein TypA [Pseudomonas protegens Pf-5]
gi|341579814|gb|AAY95797.2| GTP-binding protein TypA [Pseudomonas protegens Pf-5]
Length = 606
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/600 (54%), Positives = 439/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT +N+ + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGMDHTEMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP + + P Q+QI +L+Y+S+LG IG+GRI GR+K VV ++ D K
Sbjct: 189 SIVDNVPAPSVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTPVVAID-VDGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL RV V EA +GDIV I+G +E+ I T+CDP+ + L +DEPT+
Sbjct: 248 NGRILKLMGHHGLHRVDVEEAAAGDIVCISGFDELFISDTLCDPTAVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDSADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G EP+EN+ +DI E +QG +M+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIREVDGVKQEPFENVTIDIPEDSQGKVMEEMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+N+F+TLT G G+++ +F+ YAP KS + + R
Sbjct: 427 SNMVPDGKGRVRLEYNIPARGLIGFRNQFLTLTNGAGILTSIFDRYAPM--KSGH-MSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H +Y G I+G++SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVETGKALTYSLETLQARGKLFVEHGQEIYNGQIVGLNSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ P++ TLE A+EFI DDEL E+TPK+IRLRK+ L E ER + K
Sbjct: 544 DNMRASGKDETIALVPPVRFTLEQALEFIQDDELCEVTPKSIRLRKKILDEGERTRAAKK 603
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|403053616|ref|ZP_10908100.1| GTP-binding elongation factor family protein [Acinetobacter
bereziniae LMG 1003]
gi|445421574|ref|ZP_21435976.1| GTP-binding protein TypA [Acinetobacter sp. WC-743]
gi|444757542|gb|ELW82064.1| GTP-binding protein TypA [Acinetobacter sp. WC-743]
Length = 611
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/610 (53%), Positives = 442/610 (72%), Gaps = 11/610 (1%)
Query: 918 NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKN 977
+I L AIIAHVDHGKTTL+D LL+QSG R+MDSN +E ERGITI +KN
Sbjct: 3 DIKTLRNIAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKN 62
Query: 978 CSIEY------NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
+I++ RINI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT+
Sbjct: 63 TAIKWLDKRTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQ 122
Query: 1032 KALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANE 1091
KA G KPIV++NK+D+ +ARP+WV+D FDLFD L ++EQLDFPV+Y S L G A
Sbjct: 123 KAFARGLKPIVIINKVDKPSARPDWVIDQVFDLFDNLGGSDEQLDFPVVYASGLRGVAGP 182
Query: 1092 NSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ + +M PLFE I+ V + + P Q+QI SL+Y+S++G IG+GRI G +K+
Sbjct: 183 SPEELAEDMTPLFETIVDIVEPPSVDVDGPFQMQISSLDYNSFVGVIGVGRIQRGSVKTN 242
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSK 1211
V +++ D K +I +I + GL+RV V+ A +GDIV ITG++ + I TICDP
Sbjct: 243 TPVTVID-KDGKTRNGRILKIMGYHGLERVDVDSAQAGDIVCITGLDALNISDTICDPKN 301
Query: 1212 PNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHD 1271
LP L++DEPT+++ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV
Sbjct: 302 VEALPALSVDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSP 361
Query: 1272 DSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQ 1331
D ++VSGRGELHL++LIE MRREG+E+ VSRP+VI K ++GE+ EPYEN+ D+EE +Q
Sbjct: 362 DR-FKVSGRGELHLSVLIETMRREGFEMGVSRPQVIMKEVDGEMQEPYENVTFDVEEQHQ 420
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G +M+++ R G+L N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y
Sbjct: 421 GSVMEQMGNRKGELTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTITSGTGIMTSSFSHY 480
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
P + + KR+NGVLIS +G +A++L+ LQDRGRLF VYEGMI+G++SR
Sbjct: 481 GPAKQGA---VAKRQNGVLISMVNGTCLAFALFTLQDRGRLFAEPQLEVYEGMIVGMNSR 537
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
+D+ VNP K KQLTN+R+SG+DEA+ L IK TLE A+EFI DDELVE+TPK++R+RK
Sbjct: 538 SDDMTVNPTKAKQLTNMRASGTDEALTLTPAIKFTLEQALEFIEDDELVEVTPKSVRIRK 597
Query: 1512 RFLKENERKK 1521
+FL ENERK+
Sbjct: 598 KFLTENERKR 607
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTAIKWLD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 KRTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|46143322|ref|ZP_00135497.2| COG1217: Predicted membrane GTPase involved in stress response
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|303250532|ref|ZP_07336729.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|307249251|ref|ZP_07531248.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307251574|ref|ZP_07533481.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307256073|ref|ZP_07537861.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|302650520|gb|EFL80679.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306858775|gb|EFM90834.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306861038|gb|EFM93044.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306865495|gb|EFM97390.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 615
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 447/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWND 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGLEHEDLAEDMTPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ +V K N P Q+QI L+Y++Y+G IGIGRI G IK Q V +++ + K
Sbjct: 193 QAIVDHVEPPKVELNAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTVTVIDS-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R +EA +GDI+ ITG+ E+ I TICD + LP L++DEPT
Sbjct: 252 RNGKIGQVLGHLGLQRYEASEAFAGDIIAITGLGELNISDTICDINNVEALPALSVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 312 VSMFFCVNTSPFCGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI+K NG+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIYKEENGKKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 488 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRGNDLTVNCLQGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P++++LE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 548 LTNMRASGKDDAIVLTTPVRLSLEQALEFIDDDELVEVTPQSIRVRKRLLTENDRKR 604
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + E G I A N N
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWN 71
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|422016034|ref|ZP_16362624.1| GTP-binding protein [Providencia burhodogranariea DSM 19968]
gi|414095481|gb|EKT57143.1| GTP-binding protein [Providencia burhodogranariea DSM 19968]
Length = 607
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 441/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+ LL+QSGTF + + ++ R+MDSN++EKERGITI +KN +I++NG
Sbjct: 10 AIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNGY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVMSMVDCVLLVVDATDGPMPQTRFVTQKAFDNGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A +M PL+E
Sbjct: 130 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALNGIAGLEHTEMAEDMTPLYE 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+KYV + P Q+Q+ L+Y+SYLG IGIGRI G +K Q V +++ + K
Sbjct: 190 SIVKYVEPPAVDLEGPFQMQVSQLDYNSYLGVIGIGRIKRGTVKPNQQVTVIDS-EGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GL+R+ A +GDIV +TG+ E+ I TIC LP L +DEPT+
Sbjct: 249 NGKIGKVLTHLGLERIDSQIAEAGDIVALTGLGELNISDTICMVGNVEALPALAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ + VN SP GREGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 309 SMFYCVNTSPFCGREGKYVTSRQILDRLNKELVHNVALRVEETQDPDA-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+E + +D+EE +QG +M+ L R GDL
Sbjct: 368 SVLIENMRREGFELAVSRPKVIFREVDGRRQEPFEQVTLDVEEQHQGDVMKALGERKGDL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G R
Sbjct: 428 RDMMPDGKGRVRLDYIIPSRGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGGR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRG+LF+ H VYEG +IGIHSR NDL VN + K+L
Sbjct: 485 QNGVLISNGQGKAVAYALYSLQDRGKLFLGHGAEVYEGQVIGIHSRSNDLTVNCLTGKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L PIK+TLE A+EFI+DDELVE+TP +IRLRKR L EN+R++
Sbjct: 545 TNMRASGTDEATTLSPPIKMTLEQALEFIDDDELVEVTPLSIRLRKRHLNENDRRR 600
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+ + + + F E + + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVGKLLQQSGTFGERETVDERVMDSNDLEKERGITILAKNTAIQWNG 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVMSMVDCVLLVVDATDGPMPQTRFVTQKAFDNGLKPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|260548861|ref|ZP_05823083.1| membrane GTPase [Acinetobacter sp. RUH2624]
gi|424054334|ref|ZP_17791859.1| GTP-binding protein TypA/BipA [Acinetobacter nosocomialis Ab22222]
gi|425742324|ref|ZP_18860439.1| GTP-binding protein TypA [Acinetobacter baumannii WC-487]
gi|260408029|gb|EEX01500.1| membrane GTPase [Acinetobacter sp. RUH2624]
gi|407441824|gb|EKF48327.1| GTP-binding protein TypA/BipA [Acinetobacter nosocomialis Ab22222]
gi|425488288|gb|EKU54627.1| GTP-binding protein TypA [Acinetobacter baumannii WC-487]
Length = 611
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/606 (53%), Positives = 438/606 (72%), Gaps = 11/606 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL+QSG R+MDSN +E ERGITI +KN SI +
Sbjct: 11 AIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTSITWLDK 70
Query: 983 ---NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT+KA G K
Sbjct: 71 RTDTTYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGLK 130
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIV++NK+D+ +ARP+WV+D FDLFD L AT+EQLDFP++Y S L G A + +
Sbjct: 131 PIVIINKVDKPSARPDWVIDQVFDLFDNLGATDEQLDFPIVYASGLRGVAGPAPEELAED 190
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLFE I+ V + + P Q+QI SL+Y+S++G IG+GRI G +K V +++
Sbjct: 191 MTPLFETIVDIVEPPAVDVDGPFQMQISSLDYNSFVGVIGVGRIQRGSVKLNTPVTVID- 249
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
D +I +I + GL+R+ V+ A +GDIV ITGI+ + I TICDP LP L+
Sbjct: 250 KDGNTRNGRILKIMGYHGLERIDVDSASAGDIVCITGIDALNISDTICDPKNVEALPALS 309
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPT+++ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV D ++VSG
Sbjct: 310 VDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSPDR-FKVSG 368
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RGELHL++LIENMRREG+E+ VSRP+VI K ++GE EPYEN+ D+EE +QG +M+++
Sbjct: 369 RGELHLSVLIENMRREGFEMGVSRPQVIIKEIDGERQEPYENVTFDVEEQHQGAVMEQMG 428
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
+R G++ N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y P +
Sbjct: 429 HRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHYGPVKQGT- 487
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
+ KR+NGVLIS G + Y+L+ LQDRGRLF VYEGMI+GI+SR +D++VNP
Sbjct: 488 --VAKRQNGVLISMVQGTCLGYALFSLQDRGRLFAKPQLEVYEGMIVGINSRSDDMVVNP 545
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
K KQLTN+R+SG+D+A+ L+ I+ TLE A+EFI DDELVE+TPK+IR+RKR+L ENER
Sbjct: 546 TKAKQLTNVRASGTDDALTLVPAIEFTLEQALEFIEDDELVEVTPKSIRIRKRYLTENER 605
Query: 1520 KKKLHK 1525
K+ K
Sbjct: 606 KRNRDK 611
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 22/131 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTSITWLD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 KRTDTTYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDK 180
IV INK+DK
Sbjct: 130 KPIVIINKVDK 140
>gi|15603038|ref|NP_246110.1| hypothetical protein PM1173 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|386835825|ref|YP_006241145.1| GTP-binding protein TypA [Pasteurella multocida subsp. multocida str.
3480]
gi|425063867|ref|ZP_18466992.1| GTP-binding protein TypA/BipA [Pasteurella multocida subsp. gallicida
X73]
gi|425066034|ref|ZP_18469154.1| GTP-binding protein TypA/BipA [Pasteurella multocida subsp. gallicida
P1059]
gi|12721523|gb|AAK03257.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|385202531|gb|AFI47386.1| GTP-binding protein TypA [Pasteurella multocida subsp. multocida str.
3480]
gi|404382421|gb|EJZ78882.1| GTP-binding protein TypA/BipA [Pasteurella multocida subsp. gallicida
X73]
gi|404382574|gb|EJZ79034.1| GTP-binding protein TypA/BipA [Pasteurella multocida subsp. gallicida
P1059]
Length = 616
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 439/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQN-INARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT ++N + R+MDSN+IEKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTLEASRNESDERVMDSNDIEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SMVD VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMVDCVLLIVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHDDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K P Q+QI L+Y+SY+G IGIGRI G +K Q V I++ + K
Sbjct: 194 EAIVKHVEPPKVELEQPFQMQISQLDYNSYVGVIGIGRIKRGSVKPNQTVSIIDS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R A +GDI+ ITG+ E+ I TICD + LP L++DEPT
Sbjct: 253 RTGKIGQVLGHLGLQRYETERAYAGDIIAITGLGELNISDTICDINHVEALPALSVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDPDA-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRPRVI+K ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPRVIYKEVDGRKQEPFEQVTIDIEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+
Sbjct: 432 VRDMVPDGKGRTRLEYNIPSRGLIGFRGEFMTMTSGTGLLYSSFSHYDDI---KPGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALAYALFSLQERGKLMIEHGTEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG DEA+ L+ P++ +LE AIEFI+DDELVE+TP +IR+RK+ L E +RK+
Sbjct: 549 LTNMRASGKDEAVVLVPPVRFSLEQAIEFIDDDELVEVTPSSIRIRKKLLTETDRKR 605
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG-----------------GITQHIGAYNVVTN 114
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLEASRNESDERVMDSNDIEKERGIT--ILAKNTAIN 70
Query: 115 HGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLI 172
I +DTPGH F R + D V+L+V A DG MPQTR A G+ I
Sbjct: 71 WNDYRINIVDTPGHADFGGEVERVMSMVDCVLLIVDAFDGPMPQTRFVTQKAFAHGLKPI 130
Query: 173 VAINKIDK 180
V INK+D+
Sbjct: 131 VVINKVDR 138
>gi|425897046|ref|ZP_18873637.1| GTP-binding protein TypA [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397884285|gb|EJL00771.1| GTP-binding protein TypA [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 606
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/600 (54%), Positives = 439/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT +N+ + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLDHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP + + P Q+QI +L+Y+S+LG IG+GRI GR+K VV ++ D K
Sbjct: 189 SIVDNVPAPAVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTPVVAID-VDGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL RV V EA +GDIV I+G +E+ I T+CDP+ + L +DEPT+
Sbjct: 248 NGRILKLMGHHGLHRVDVEEAAAGDIVCISGFDELFISDTLCDPTAVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDSADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G EP+EN+ +DI E +QG +M+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIREVDGVKQEPFENVTIDIPEESQGKVMEEMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+N+F+TLT G G+++ +F+ YAP KS + + R
Sbjct: 427 SNMVPDGKGRVRLEYNIPARGLIGFRNQFLTLTNGAGILTSIFDRYAPM--KSGH-MSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H +Y G I+G++SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVETGKALTYSLETLQARGKLFVEHGQEIYNGQIVGLNSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ P++ TLE A+EFI DDEL E+TPK+IRLRK+ L E ER + K
Sbjct: 544 DNMRASGKDETIALVPPVRFTLEQALEFIQDDELCEVTPKSIRLRKKILDEGERTRAAKK 603
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|322835068|ref|YP_004215095.1| GTP-binding protein TypA [Rahnella sp. Y9602]
gi|384260290|ref|YP_005404224.1| GTP-binding protein TypA [Rahnella aquatilis HX2]
gi|321170269|gb|ADW75968.1| GTP-binding protein TypA [Rahnella sp. Y9602]
gi|380756266|gb|AFE60657.1| GTP-binding protein TypA [Rahnella aquatilis HX2]
Length = 607
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/598 (54%), Positives = 445/598 (74%), Gaps = 5/598 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGNDHNDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++Y+G IGIGRI G +K Q + +++ + K
Sbjct: 189 AIVDHVSPPQVEMEAPFQMQISQLDYNNYVGVIGIGRIKRGTVKPNQQITVIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICDP+ LP L++DEPT+
Sbjct: 248 NGKVGKVLTHMGLERIEATVAEAGDIIAITGLGELNISDTICDPANVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP ++R+RKR L EN+RK+ +
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPLSVRIRKRHLTENDRKRAM 601
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|398843471|ref|ZP_10600615.1| GTP-binding protein TypA/BipA [Pseudomonas sp. GM102]
gi|398898588|ref|ZP_10648454.1| GTP-binding protein TypA/BipA [Pseudomonas sp. GM50]
gi|398102813|gb|EJL92990.1| GTP-binding protein TypA/BipA [Pseudomonas sp. GM102]
gi|398184151|gb|EJM71611.1| GTP-binding protein TypA/BipA [Pseudomonas sp. GM50]
Length = 606
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/600 (54%), Positives = 439/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT +N+ + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLEHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP K + + P Q+QI +L+Y+S+LG IG+GRI GRIK VV ++ D K
Sbjct: 189 SIVDNVPAPKVDRDGPFQMQISALDYNSFLGVIGVGRIARGRIKPNTPVVAIDA-DGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL R+ V EA +GDIV I+G +++ I T+CDP + L +DEPT+
Sbjct: 248 NGRILKLMGHHGLHRIDVEEAAAGDIVCISGFDQLFISDTLCDPLNVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDTADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G +EPYEN+ +D+ E +QG IM+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIRMVDGVKHEPYENVTIDLPEESQGSIMEQIGIRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+NEF+TLT G G+++ +F+ Y + D+ R
Sbjct: 427 TNMVPDGKGRVRLEYNIPARGLIGFRNEFLTLTSGAGILTSIFDRYDVMKSG---DMSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H + VYEG I+GI+SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVATGKALTYSLETLQARGKLFLGHGEDVYEGQIVGINSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ PI+ TLE A+EF+ +DEL E+TPK+IRLRK+ L E+ER + K
Sbjct: 544 DNMRASGKDETIALVPPIRFTLEQALEFVQEDELCEVTPKSIRLRKKILGESERTRAAKK 603
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|270265254|ref|ZP_06193516.1| putative GTP-binding protein TypA/BipA [Serratia odorifera 4Rx13]
gi|270040888|gb|EFA13990.1| putative GTP-binding protein TypA/BipA [Serratia odorifera 4Rx13]
Length = 603
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/596 (54%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 5 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 64
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 65 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 124
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 125 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGTDHNEMAEDMTPLYQ 184
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 185 AIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 243
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 244 NGKVAKVLTHMGLERIEAAVAEAGDIIAITGLGELNISDTICDTNAVEALPALSVDEPTV 303
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 304 TMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 362
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 363 SVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 422
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + + ++G+R
Sbjct: 423 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRQGEIGQR 479
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 480 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 539
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 540 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKR 595
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 126/317 (39%), Gaps = 72/317 (22%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 4 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 63
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 64 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 123
Query: 176 NKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG---INKLLENIS- 227
NK+D + D +D++ ++ E+ P I SA G+ N++ E+++
Sbjct: 124 NKVDRPGARPDWVVDQVFDLFVNLDATDEQLD--FPIIYASALMGIAGTDHNEMAEDMTP 181
Query: 228 --------LQAEILELKAPVTTPAK--------GVIIESRLDKGK--------------- 256
+ A +EL+AP GVI R+ +GK
Sbjct: 182 LYQAIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDSEGK 241
Query: 257 ---GPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNEN------GKNILEAGPSIPVEIQ 307
G VA VL G R V I + N N +EA P++ V+
Sbjct: 242 TRNGKVAKVLTHMGLERIEAAVAEAGDIIAITGLGELNISDTICDTNAVEALPALSVDEP 301
Query: 308 GLT------KVPFSGEE 318
+T PF G+E
Sbjct: 302 TVTMYFNVNTSPFCGKE 318
>gi|333891779|ref|YP_004465654.1| BipA protein [Alteromonas sp. SN2]
gi|332991797|gb|AEF01852.1| BipA protein [Alteromonas sp. SN2]
Length = 609
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 437/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLETRGEQEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD L AT++QLDF V+Y SAL+G+A+ ++ + +M LF+
Sbjct: 133 KIDKPGARPDWVMDQVFDLFDNLGATDDQLDFQVVYASALNGWASLDADKPEEDMNALFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V +++ Q+QI L+Y+SY+G IG+GRI G +K Q V ++ +K N
Sbjct: 193 TIVDQVSPPDADASGAFQMQISQLDYNSYVGVIGVGRIKRGTVKPNQQVTVVTAEGEKRN 252
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ + + GL R V A +GDI+ ITG+ + I TICD ++ + L++DEPT+
Sbjct: 253 -GKVGLVYGYLGLARHEVEGASAGDIIAITGLGSLKISDTICDTNQVEAMTPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP +G+EGK++T+R I RL+ E+ +N+ LRV + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFSGKEGKYVTSRNILERLNDELVHNVALRVEETPDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYEL+VSRP VI K NGE EP+E L VD EE +QG IM++L R ++
Sbjct: 371 GILIENMRREGYELAVSRPEVILKEENGETQEPFETLTVDCEEAHQGSIMEQLGLRKAEM 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVR+++ IPSRGLIGFQ EF+T+T G+GL+ H F+ Y P+ +GKR
Sbjct: 431 TNMSPDGKGRVRIDFVIPSRGLIGFQTEFMTMTSGSGLLYHTFDHYGPYKGGI---IGKR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIHSRDNDL VN +K KQL
Sbjct: 488 KNGVLIANANGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHSRDNDLTVNALKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ PIK++LE A+EFI++DELVE+TP +IR+RK+ L ENERK+
Sbjct: 548 TNVRASGTDEAQTLVPPIKMSLEQALEFIDEDELVEVTPVSIRIRKKLLTENERKR 603
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLETRGEQEERVMDSNDIEKERGITILAKNTAINWND 71
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 72 YRINIVDTPGHADFGGEVERVMSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 131
Query: 176 NKIDK 180
NKIDK
Sbjct: 132 NKIDK 136
>gi|417853931|ref|ZP_12499265.1| hypothetical protein AAUPMG_07068 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|338218789|gb|EGP04534.1| hypothetical protein AAUPMG_07068 [Pasteurella multocida subsp.
multocida str. Anand1_goat]
Length = 616
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 439/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQN-INARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT ++N + R+MDSN+IEKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTLEASRNESDERVMDSNDIEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SMVD VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMVDCVLLIVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHDDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K P Q+QI L+Y+SY+G IGIGRI G +K Q V I++ + K
Sbjct: 194 EAIVKHVEPPKVELEQPFQMQISQLDYNSYVGVIGIGRIKRGSVKPNQTVSIIDS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R A +GDI+ ITG+ E+ I TICD + LP L++DEPT
Sbjct: 253 RTGKIGQVLGHLGLQRYETERAYAGDIIAITGLGELNISDTICDINHVEALPALSVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDPDA-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRPRVI+K ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPRVIYKEVDGRKQEPFEQVTIDIEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+
Sbjct: 432 VRDMVPDGKGRTRLEYNIPSRGLIGFRGEFMTMTSGTGLLYSSFSHYDDI---KAGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALAYALFSLQERGKLMIEHGTEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG DEA+ L+ P++ +LE AIEFI+DDELVE+TP +IR+RK+ L E +RK+
Sbjct: 549 LTNMRASGKDEAVVLVPPVRFSLEQAIEFIDDDELVEVTPSSIRIRKKLLTETDRKR 605
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG-----------------GITQHIGAYNVVTN 114
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLEASRNESDERVMDSNDIEKERGIT--ILAKNTAIN 70
Query: 115 HGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLI 172
I +DTPGH F R + D V+L+V A DG MPQTR A G+ I
Sbjct: 71 WNDYRINIVDTPGHADFGGEVERVMSMVDCVLLIVDAFDGPMPQTRFVTQKAFAHGLKPI 130
Query: 173 VAINKIDK 180
V INK+D+
Sbjct: 131 VVINKVDR 138
>gi|418021810|ref|ZP_12660817.1| GTP-binding protein TypA/BipA [Candidatus Regiella insecticola R5.15]
gi|347602834|gb|EGY27791.1| GTP-binding protein TypA/BipA [Candidatus Regiella insecticola R5.15]
Length = 607
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDARVEATERVMDSNDLEKERGITILAKNTAIKWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA++GPMPQTRFVT+KA G PIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLVVDALDGPMPQTRFVTQKAFSHGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFDKL AT++QL+FPVIY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVLDQVFDLFDKLGATDKQLEFPVIYASALLGIAGIEHEKMATDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + + LQ+QI L+Y+SY+G IGIGRI G +K Q V I++ + K
Sbjct: 189 TIVDKVAAPQVEIDGTLQMQISQLDYNSYVGVIGIGRIKRGTVKPNQQVSIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVGKVFSHLGLERIETDLAEAGDIIAITGLGELHISDTICDVNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP G+EGK++T+RQI +RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 NMYFCVNTSPFCGKEGKYVTSRQILDRLKKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI++ +NG + EP+EN+ +DIEE +QG +MQ L R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVIYREVNGCVQEPFENVTLDIEEQHQGAVMQALGGRKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K RVRL+Y IPSRGLIGF+ EF+TLT GTGL+ F Y + ++G+R
Sbjct: 427 KDMAPDGKGRVRLDYEIPSRGLIGFRTEFMTLTSGTGLLYSTFSHYD---DVKPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+L + H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFSLQDRGKLCLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA LI PIK++LE A+EFI+DDELVEITP +IR+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLIPPIKMSLEQALEFIDDDELVEITPLSIRIRKRHLTENDRKR 599
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDARVEATERVMDSNDLEKERGITILAKNTAIKWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDALDGPMPQTRFVTQKAFSHGLNPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|386824725|ref|ZP_10111855.1| GTP-binding protein TypA [Serratia plymuthica PRI-2C]
gi|386378402|gb|EIJ19209.1| GTP-binding protein TypA [Serratia plymuthica PRI-2C]
Length = 607
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/596 (54%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGTDHNEMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVAKVLTHMGLERIEAAVAEAGDIIAITGLGELNISDTICDTTAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRQGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKR 599
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 130/320 (40%), Gaps = 78/320 (24%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG---INKLLENIS- 227
NK+D + D +D++ ++ E+ P I SA G+ N++ E+++
Sbjct: 128 NKVDRPGARPDWVVDQVFDLFVNLDATDEQLD--FPIIYASALMGIAGTDHNEMAEDMTP 185
Query: 228 --------LQAEILELKAPVTTPAK--------GVIIESRLDKGK--------------- 256
+ A +EL+AP GVI R+ +GK
Sbjct: 186 LYQAIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDSEGK 245
Query: 257 ---GPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNI---------LEAGPSIPV 304
G VA VL G R I A A G I ++ NI +EA P++ V
Sbjct: 246 TRNGKVAKVLTHMGLER---IEAAVAEAGDIIAITGLGELNISDTICDTTAVEALPALSV 302
Query: 305 EIQGLT------KVPFSGEE 318
+ +T PF G+E
Sbjct: 303 DEPTVTMYFNVNTSPFCGKE 322
>gi|299768857|ref|YP_003730883.1| GTP-binding elongation factor family protein [Acinetobacter
oleivorans DR1]
gi|298698945|gb|ADI89510.1| GTP-binding elongation factor family protein [Acinetobacter
oleivorans DR1]
Length = 609
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/602 (53%), Positives = 438/602 (72%), Gaps = 11/602 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSG R+MDS IE ERGITI +KN +I++
Sbjct: 11 AIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKNTAIKWTDA 70
Query: 986 R------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
R INI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT+KA G K
Sbjct: 71 RTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGLK 130
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIV++NK+D+ +ARP+WV+D FDLFD L ++EQLDFPV+Y S L G A + + +
Sbjct: 131 PIVIINKVDKPSARPDWVIDQVFDLFDNLGGSDEQLDFPVVYASGLRGVAGPSPEELADD 190
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLF+ I+ V +++ P Q+QI SL+Y+S++G IG+GRI G I V +++
Sbjct: 191 MTPLFQTIVDIVEPPAVDADGPFQMQISSLDYNSFVGVIGVGRIQRGSIGLNTPVTVID- 249
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
D K +I +I + GL+RV V+ A +GDIV ITGI+E+ I TICDP LP L+
Sbjct: 250 KDGKTRNGRILKIMGYHGLERVDVDSAQAGDIVCITGIDELHISDTICDPKNVEALPPLS 309
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPT+T+ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV D ++VSG
Sbjct: 310 VDEPTVTMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSPDR-FKVSG 368
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RGELHL++LIENMRREG+E+ VSRP+VI K ++GE EPYEN+ D+EE +QG +M+++
Sbjct: 369 RGELHLSVLIENMRREGFEMGVSRPQVILKEVDGEKQEPYENVTFDVEEQHQGSVMEQMG 428
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
R G++ N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y P +
Sbjct: 429 NRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHYGPMKQGT- 487
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
+ KR+NGVLIS G + Y+L+ LQDRGRLF VYEGMI+GI+SR +D++VNP
Sbjct: 488 --VAKRQNGVLISMVQGTCLGYALFSLQDRGRLFAKPQLEVYEGMIVGINSRSDDMVVNP 545
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
K KQLTN+R+SG+D+A+ L+ I+ TLE A+EFI DDELVE+TPK+IR+RKR+L ENER
Sbjct: 546 TKAKQLTNVRASGTDDALTLVPAIEYTLEQALEFIEDDELVEVTPKSIRIRKRWLTENER 605
Query: 1520 KK 1521
K+
Sbjct: 606 KR 607
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKNTAIKWTD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 ARTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|165975510|ref|YP_001651103.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|165875611|gb|ABY68659.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
Length = 630
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/597 (55%), Positives = 447/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 28 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWND 87
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 88 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 147
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PLF
Sbjct: 148 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGLEHEDLAEDMTPLF 207
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ +V K N P Q+QI L+Y++Y+G IGIGRI G IK Q V +++ + K
Sbjct: 208 QAIVDHVEPPKVELNAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTVTVIDS-EGKT 266
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R +EA +GDI+ ITG+ E+ I TICD + LP L++DEPT
Sbjct: 267 RNGKIGQVLGHLGLQRYEASEAFAGDIIAITGLGELNISDTICDINNVEALPALSVDEPT 326
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 327 VSMFFCVNTSPFCGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 385
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ NG+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 386 LSVLIENMRREGYELAVSRPKVIYREENGKKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 445
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 446 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 502
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 503 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRGNDLTVNCLQGKK 562
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P++++LE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 563 LTNMRASGKDDAIVLTTPVRLSLEQALEFIDDDELVEVTPQSIRVRKRLLTENDRKR 619
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 56 EYNKNITAESLVRAPI--VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH-------- 105
+ NK+I+ ++L + + I+ HVDHGKT+L+D + + + E G
Sbjct: 9 QLNKDISMQNLDINKLRNIAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDL 68
Query: 106 -------IGAYNVVTNHGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQ 156
I A N N I +DTPGH F R + D V+LVV A DG MPQ
Sbjct: 69 EKERGITILAKNTAINWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQ 128
Query: 157 TREAIAHAKISGVPLIVAINKIDK 180
TR A G+ IV INK+D+
Sbjct: 129 TRFVTQKAFAHGLKPIVVINKVDR 152
>gi|66048039|ref|YP_237880.1| GTP-binding protein TypA [Pseudomonas syringae pv. syringae B728a]
gi|302189386|ref|ZP_07266059.1| GTP-binding protein TypA [Pseudomonas syringae pv. syringae 642]
gi|422675247|ref|ZP_16734593.1| GTP-binding protein TypA [Pseudomonas syringae pv. aceris str.
M302273]
gi|63258746|gb|AAY39842.1| Small GTP-binding protein domain:GTP-binding protein TypA
[Pseudomonas syringae pv. syringae B728a]
gi|330972967|gb|EGH73033.1| GTP-binding protein TypA [Pseudomonas syringae pv. aceris str.
M302273]
Length = 606
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/600 (54%), Positives = 439/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERGELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A A +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLEHTAMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP K + + P Q+QI +L+Y+S+LG IG+GRI GR+K VV ++ + K
Sbjct: 189 AIVDHVPAPKVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTPVVAID-VNGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL R+ V EA +GDIV I+G +++ I T+CDP + L +DEPT+
Sbjct: 248 NGRILKLMGHHGLHRIDVEEAAAGDIVCISGFDQLFISDTLCDPLNVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDTADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G +EPYEN+ +D+ E QG IM+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIRMVDGVKHEPYENVTIDLPEEAQGAIMEQMGNRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+NEF+TLT G G+++ +F+ Y + D+ R
Sbjct: 427 TNMVPDGKGRVRLEYNIPARGLIGFRNEFLTLTSGAGILTSIFDRYDVMKSG---DMSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H + VYEG I+GI+SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVATGKALTYSLETLQARGKLFLGHGEDVYEGQIVGINSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ PI+ TLE A+EF+ +DEL E+TPK+IRLRK+ L E+ER + K
Sbjct: 544 DNMRASGKDETIALVPPIRFTLEQALEFVQEDELCEVTPKSIRLRKKILGESERTRAAKK 603
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG----------------GITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERGELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|333929787|ref|YP_004503366.1| GTP-binding protein TypA [Serratia sp. AS12]
gi|333934740|ref|YP_004508318.1| GTP-binding protein TypA [Serratia plymuthica AS9]
gi|386331610|ref|YP_006027780.1| GTP-binding protein TypA [Serratia sp. AS13]
gi|333476347|gb|AEF48057.1| GTP-binding protein TypA [Serratia plymuthica AS9]
gi|333493847|gb|AEF53009.1| GTP-binding protein TypA [Serratia sp. AS12]
gi|333963943|gb|AEG30716.1| GTP-binding protein TypA [Serratia sp. AS13]
Length = 607
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/596 (54%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGTDHNEMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVAKVLTHMGLERIEATVAEAGDIIAITGLGELNISDTICDTNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRQGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKR 599
Score = 70.9 bits (172), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 126/317 (39%), Gaps = 72/317 (22%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG---INKLLENIS- 227
NK+D + D +D++ ++ E+ P I SA G+ N++ E+++
Sbjct: 128 NKVDRPGARPDWVVDQVFDLFVNLDATDEQLD--FPIIYASALMGIAGTDHNEMAEDMTP 185
Query: 228 --------LQAEILELKAPVTTPAK--------GVIIESRLDKGK--------------- 256
+ A +EL+AP GVI R+ +GK
Sbjct: 186 LYQAIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDSEGK 245
Query: 257 ---GPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNEN------GKNILEAGPSIPVEIQ 307
G VA VL G R V I + N N +EA P++ V+
Sbjct: 246 TRNGKVAKVLTHMGLERIEATVAEAGDIIAITGLGELNISDTICDTNAVEALPALSVDEP 305
Query: 308 GLT------KVPFSGEE 318
+T PF G+E
Sbjct: 306 TVTMYFNVNTSPFCGKE 322
>gi|378775783|ref|YP_005178026.1| GTP-binding protein TypA/BipA [Pasteurella multocida 36950]
gi|356598331|gb|AET17057.1| GTP-binding protein TypA/BipA [Pasteurella multocida 36950]
Length = 616
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 439/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQN-INARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT ++N + R+MDSN+IEKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTLEASRNESDERVMDSNDIEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SMVD VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMVDCVLLIVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHDDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K P Q+QI L+Y+SY+G IGIGRI G +K Q V I++ + K
Sbjct: 194 EAIVKHVEPPKVELEQPFQMQISQLDYNSYVGVIGIGRIKRGSVKPNQTVSIIDS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R A +GDI+ ITG+ E+ I TICD + LP L++DEPT
Sbjct: 253 RTGKIGQVLGHLGLQRYETERAYAGDIIAITGLGELNISDTICDINHVEALPALSVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDPDA-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRPRVI+K ++G EP+E + +DIEE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPRVIYKEVDGRKQEPFEQVTIDIEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+
Sbjct: 432 VRDMVPDGKGRTRLEYNIPSRGLIGFRGEFMTMTSGTGLLYSSFSHYDDI---KLGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALAYALFSLQERGKLMIEHGTEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG DEA+ L+ P++ +LE AIEFI+DDELVE+TP +IR+RK+ L E +RK+
Sbjct: 549 LTNMRASGKDEAVVLVPPVRFSLEQAIEFIDDDELVEVTPSSIRIRKKLLTETDRKR 605
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG-----------------GITQHIGAYNVVTN 114
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLEASRNESDERVMDSNDIEKERGIT--ILAKNTAIN 70
Query: 115 HGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLI 172
I +DTPGH F R + D V+L+V A DG MPQTR A G+ I
Sbjct: 71 WNDYRINIVDTPGHADFGGEVERVMSMVDCVLLIVDAFDGPMPQTRFVTQKAFAHGLKPI 130
Query: 173 VAINKIDK 180
V INK+D+
Sbjct: 131 VVINKVDR 138
>gi|409421963|ref|ZP_11259084.1| GTP-binding protein TypA [Pseudomonas sp. HYS]
Length = 607
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/600 (54%), Positives = 438/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT +N+ + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLDHTEMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP + + P Q+QI +L+Y+S+LG IG+GRI GR+K VV ++ D K
Sbjct: 189 SIVDNVPAPAVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTPVVAID-TDGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL RV V EA +GDIV I+G +E+ I T+C P + L +DEPT+
Sbjct: 248 NGRILKLMGHHGLHRVDVEEAQAGDIVCISGFDELFISDTLCSPDAVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDSADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G +EP+EN+ +DI E +QG +M+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIREVDGAKHEPFENVTIDIPEDSQGKVMEEMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+N+F+TLT G G+++ +F+ YAP KS + + R
Sbjct: 427 TNMVPDGKGRVRLEYNIPARGLIGFRNQFLTLTNGAGILTSIFDRYAPM--KSGH-MSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H +Y G I+G++SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVETGKALTYSLETLQARGKLFVEHGQEIYNGQIVGLNSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ P++ TLE A+EFI DDEL E+TPK+IRLRK+ L E ER + K
Sbjct: 544 DNMRASGKDETIALVPPVRFTLEQALEFIQDDELCEVTPKSIRLRKKILDEGERTRAAKK 603
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|392422964|ref|YP_006459568.1| GTP-binding protein TypA [Pseudomonas stutzeri CCUG 29243]
gi|390985152|gb|AFM35145.1| GTP-binding protein TypA [Pseudomonas stutzeri CCUG 29243]
Length = 606
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/597 (55%), Positives = 441/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLR SGT + + N R+MDSN+ EKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + +M LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGMDHEKMDDDMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP K + + P Q+QI L+Y+S+LG IGIGRI G IK+ V + G D K
Sbjct: 189 AIIDHVPSPKVDLDGPFQMQISQLDYNSFLGVIGIGRIARGTIKANSPVTAI-GADGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G++E+ I T+CD + LP L +D+PT+
Sbjct: 248 NGRILKIMGHSGLQRVEVQEAEAGDIVCVSGMDELYISDTLCDQNAVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RL+ E+ +N+ LRV + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLEKELLHNVALRVEPGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPR-VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+EL+V RP VI + GE EPYEN+ +DIEE +QG +M+++ R GD
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIENEAGEKQEPYENVTIDIEEQHQGPVMEQMGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRLEY IP+RGLIGF+N F+TLT G+G+++ F Y P ++
Sbjct: 427 LSNMVPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGSGILTSTFSHYGPI---KAGEVTN 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+
Sbjct: 484 RQNGVLVSMATGTALTYSLETLQARGKLFLAPGDEIYEGQLCGINSRDNDLVLNPTKGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L N+R+SG DE I L+ PIK TLE A+EFI DDELVE+TPK+IRLRK++L EN+RK+
Sbjct: 544 LDNMRASGKDEVIALVPPIKFTLEQALEFIADDELVEVTPKSIRLRKKYLNENDRKR 600
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWNG 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+I +DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|365921604|ref|ZP_09445870.1| GTP-binding protein TypA [Cardiobacterium valvarum F0432]
gi|364575795|gb|EHM53163.1| GTP-binding protein TypA [Cardiobacterium valvarum F0432]
Length = 561
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/564 (58%), Positives = 430/564 (76%), Gaps = 7/564 (1%)
Query: 959 IMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDA 1018
+MDS ++E+ERGITI +KN +I + +INI+DTPGHADFGGEVER+LSMVD+VLLL+DA
Sbjct: 1 MMDSMDLERERGITIMAKNTAIRWKDYQINIVDTPGHADFGGEVERVLSMVDSVLLLVDA 60
Query: 1019 VEGPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFP 1078
++GPMPQTRFVT+KA +G PIVV+NKIDR AR +WV++ TFDLFD+L AT+EQLDFP
Sbjct: 61 MDGPMPQTRFVTQKAFDMGLNPIVVINKIDRPGARADWVLNETFDLFDRLGATDEQLDFP 120
Query: 1079 VIYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKI 1138
+IY S L+GYA +N R G+M PLFEAI+ +V + + P ++Q+ SL+YSSY G I
Sbjct: 121 IIYASGLNGYAGDNPDIRSGDMTPLFEAIVNHVKPPQVERDKPFRMQVSSLDYSSYTGVI 180
Query: 1139 GIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIE 1198
GIGRI G I V I+ G D +I QI F GL++V V+ A +GDI+ TGI+
Sbjct: 181 GIGRIERGSISGNTQVKII-GRDGGIRNGRILQIYKFLGLEKVEVDSAAAGDIISFTGID 239
Query: 1199 EICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIK 1258
+ I T+CDP+ LP L++DEPT+++ F VNNSP AGREGKF+T+RQIK RL+ E+
Sbjct: 240 PLYISDTLCDPNHVEALPHLSVDEPTMSMTFQVNNSPFAGREGKFVTSRQIKERLERELI 299
Query: 1259 NNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEP 1318
+N+ LRV + D ++VSGRGELHL++LIE MRREGYEL VSRP VI+K ++GE +EP
Sbjct: 300 HNVALRVEEMDDPDK-FKVSGRGELHLSVLIETMRREGYELGVSRPEVIYKEIDGETHEP 358
Query: 1319 YENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLT 1378
YE + +D++E +QG +M+++ R G+L+N+ + K R+RLEY IP+RGLIGFQ EF+TLT
Sbjct: 359 YEFVVLDLDEQHQGAVMERMGERKGELRNMMPDGKGRIRLEYLIPTRGLIGFQTEFMTLT 418
Query: 1379 RGTGLISHVFEEYAPFYNKSKYDLGK-RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHN 1437
G+GL F+ YAP K LGK R NGVLIS +GKA+AY+L+ LQ+RGRLFI H
Sbjct: 419 SGSGLKFQTFDHYAP----KKEGLGKTRHNGVLISMATGKALAYALFNLQERGRLFIGHG 474
Query: 1438 DLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDD 1497
D VYEGM+IGIHSRDNDL VNP+K KQLTNIR++GSDE + L PI+ TLE A+EFI+DD
Sbjct: 475 DEVYEGMVIGIHSRDNDLTVNPLKAKQLTNIRAAGSDENLILTPPIRNTLEQALEFIDDD 534
Query: 1498 ELVEITPKNIRLRKRFLKENERKK 1521
ELVE+TPK++R+RK+ L ENERKK
Sbjct: 535 ELVEVTPKSVRIRKKLLTENERKK 558
Score = 50.4 bits (119), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 37/72 (51%)
Query: 117 SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
I +DTPGH F R + D V+L+V A DG MPQTR A G+ IV IN
Sbjct: 28 QINIVDTPGHADFGGEVERVLSMVDSVLLLVDAMDGPMPQTRFVTQKAFDMGLNPIVVIN 87
Query: 177 KIDKLDINLDRI 188
KID+ D +
Sbjct: 88 KIDRPGARADWV 99
>gi|398939068|ref|ZP_10668287.1| GTP-binding protein TypA/BipA [Pseudomonas sp. GM41(2012)]
gi|398164704|gb|EJM52834.1| GTP-binding protein TypA/BipA [Pseudomonas sp. GM41(2012)]
Length = 606
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/600 (54%), Positives = 438/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT +N+ + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLEHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP K + P Q+QI +L+Y+S+LG IG+GRI GRIK VV ++ D K
Sbjct: 189 SIVDNVPAPKVDREGPFQMQISALDYNSFLGVIGVGRIARGRIKPNTPVVAIDA-DGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL R+ V EA +GDIV I+G +++ I T+CDP + L +DEPT+
Sbjct: 248 TGRILKLMGHHGLHRIDVEEAAAGDIVCISGFDQLFISDTLCDPLNVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDTADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G +EPYEN+ +D+ E +QG IM+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIRMVDGVKHEPYENVTIDLPEESQGSIMEQIGIRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+NEF+TLT G G+++ +F+ Y + D+ R
Sbjct: 427 TNMVPDGKGRVRLEYNIPARGLIGFRNEFLTLTSGAGILTSIFDRYDVMKSG---DMSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H + VYEG I+GI+SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVATGKALTYSLETLQARGKLFLGHGEDVYEGQIVGINSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ PI+ TLE A+EF+ +DEL E+TPK+IRLRK+ L E+ER + K
Sbjct: 544 DNMRASGKDETIALVPPIRFTLEQALEFVQEDELCEVTPKSIRLRKKILGESERTRAAKK 603
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|421786269|ref|ZP_16222678.1| GTP-binding protein TypA/BipA [Serratia plymuthica A30]
gi|407751615|gb|EKF61789.1| GTP-binding protein TypA/BipA [Serratia plymuthica A30]
Length = 607
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/596 (54%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGTDHNEMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVAKVLTHMGLERIEAAVAEAGDIIAITGLGELNISDTICDTNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRQGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKR 599
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 126/317 (39%), Gaps = 72/317 (22%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG---INKLLENIS- 227
NK+D + D +D++ ++ E+ P I SA G+ N++ E+++
Sbjct: 128 NKVDRPGARPDWVVDQVFDLFVNLDATDEQLD--FPIIYASALMGIAGTDHNEMAEDMTP 185
Query: 228 --------LQAEILELKAPVTTPAK--------GVIIESRLDKGK--------------- 256
+ A +EL+AP GVI R+ +GK
Sbjct: 186 LYQAIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDSEGK 245
Query: 257 ---GPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNEN------GKNILEAGPSIPVEIQ 307
G VA VL G R V I + N N +EA P++ V+
Sbjct: 246 TRNGKVAKVLTHMGLERIEAAVAEAGDIIAITGLGELNISDTICDTNAVEALPALSVDEP 305
Query: 308 GLT------KVPFSGEE 318
+T PF G+E
Sbjct: 306 TVTMYFNVNTSPFCGKE 322
>gi|389686151|ref|ZP_10177472.1| GTP-binding protein TypA [Pseudomonas chlororaphis O6]
gi|388549612|gb|EIM12884.1| GTP-binding protein TypA [Pseudomonas chlororaphis O6]
Length = 606
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/600 (54%), Positives = 439/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT +N+ + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLDHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP + + P Q+QI +L+Y+S+LG IG+GRI GR+K VV ++ K N
Sbjct: 189 SIVDNVPAPAVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTPVVAIDTEGKKRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL RV V EA +GDIV I+G +E+ I T+CDP+ + L +DEPT+
Sbjct: 249 -GRILKLMGHHGLHRVDVEEAAAGDIVCISGFDELFISDTLCDPTAVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDSADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G EP+EN+ +DI E +QG +M+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIREVDGVKQEPFENVTIDIPEESQGKVMEEMGLRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+N+F+TLT G G+++ +F+ YAP KS + + R
Sbjct: 427 SNMVPDGKGRVRLEYNIPARGLIGFRNQFLTLTNGAGILTSIFDRYAPM--KSGH-MSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H +Y G I+G++SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVETGKALTYSLETLQARGKLFVEHGQEIYNGQIVGLNSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ P++ TLE A+EFI DDEL E+TPK+IRLRK+ L E ER + K
Sbjct: 544 DNMRASGKDETIALVPPVRFTLEQALEFIQDDELCEVTPKSIRLRKKILDEGERTRAAKK 603
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|407366983|ref|ZP_11113515.1| GTP-binding protein TypA [Pseudomonas mandelii JR-1]
Length = 606
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/600 (54%), Positives = 438/600 (73%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT +N+ + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLEHTDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP K + P Q+QI +L+Y+S+LG IG+GRI GRIK VV ++ D K
Sbjct: 189 SIVDNVPAPKVDREGPFQMQISALDYNSFLGVIGVGRIARGRIKPNTPVVAIDA-DGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL R+ V EA +GDIV I+G +++ I T+CDP + L +DEPT+
Sbjct: 248 NGRILKLMGHHGLHRIDVEEAAAGDIVCISGFDQLFISDTLCDPLNVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDTADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G +EPYEN+ +D+ E +QG IM+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIRMVDGVKHEPYENVTIDLPEESQGSIMEQIGIRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+NEF+TLT G G+++ +F+ Y + D+ R
Sbjct: 427 TNMVPDGKGRVRLEYNIPARGLIGFRNEFLTLTSGAGILTSIFDRYDVMKSG---DMSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H + VYEG I+GI+SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVATGKALTYSLETLQARGKLFLGHGEDVYEGQIVGINSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ PI+ TLE A+EF+ +DEL E+TPK+IRLRK+ L E+ER + K
Sbjct: 544 DNMRASGKDETIALVPPIRFTLEQALEFVQEDELCEVTPKSIRLRKKILGESERTRAAKK 603
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 61/127 (48%), Gaps = 20/127 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 116 GS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDK 180
INK+D+
Sbjct: 126 VINKVDR 132
>gi|303251876|ref|ZP_07338047.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307247029|ref|ZP_07529083.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302649306|gb|EFL79491.1| GTP-binding protein [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|306856481|gb|EFM88630.1| GTP-binding protein typA/bipA [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 615
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/597 (55%), Positives = 447/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWND 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGLEHEDLAEDMTPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ +V K N P Q+QI L+Y++Y+G IGIGRI G IK Q V +++ + K
Sbjct: 193 QAIVDHVEPPKVELNAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTVTVIDS-EGKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R +EA +GDI+ ITG+ E+ I TICD + LP L++DEPT
Sbjct: 252 RNGKIGQVLGHLGLQRYEASEAFAGDIIAITGLGELNISDTICDINNVEALPALSVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 312 VSMFFCVNTSPFCGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ NG+ EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIYREENGKKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 488 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRGNDLTVNCLQGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P++++LE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 548 LTNMRASGKDDAIVLTTPVRLSLEQALEFIDDDELVEVTPQSIRVRKRLLTENDRKR 604
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + + + E G I A N N
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWN 71
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|85060207|ref|YP_455909.1| GTP-binding elongation factor [Sodalis glossinidius str. 'morsitans']
gi|84780727|dbj|BAE75504.1| putative GTP-binding elongation factor [Sodalis glossinidius str.
'morsitans']
Length = 603
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/596 (54%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN++EKERGITI +KN +I ++
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGDRNDATERVMDSNDLEKERGITILAKNTAINWHDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL G A + +M PLFE
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALLGIAGLEHENMADDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+K V + + Q+QI L+Y+SY+G IG+GRI G +K Q+V +++ + N
Sbjct: 189 SIVKNVEAPNVDVDGLFQMQISQLDYNSYVGVIGVGRIKRGSVKPHQNVTVVDSEGKRRN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ GL R+ A +GDI+ ITG+ E+ I T+CD ++ LP L +DEPT+
Sbjct: 249 -GKVGQVLGHMGLQRIESKLAEAGDIIAITGLGELNISDTLCDQAQVEALPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+++F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMSFGVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETEDPDT-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E++VSRP+VIF+T++G EP+E++ +DIEE +QG +M+ + R G++
Sbjct: 367 SVLIENMRREGFEIAVSRPKVIFRTVDGAKQEPFESVTLDIEEQHQGPVMEAMGIRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K R+RL+Y IPSRGLIGF+ +F+T+T GTGL+ F Y + ++G+R
Sbjct: 427 RDMLPDGKGRIRLDYVIPSRGLIGFRTDFLTMTSGTGLLYSTFSHYD---DVRPGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRGRLF+ H VYEG IIGIH+R NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAYALYSLQDRGRLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP++IRLRKR+L ENERK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPQSIRLRKRYLTENERKR 599
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGDRNDATERVMDSNDLEKERGITILAKNTAINWHD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAYGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|197334122|ref|YP_002154868.1| GTP-binding protein TypA/BipA [Vibrio fischeri MJ11]
gi|197315612|gb|ACH65059.1| GTP-binding protein TypA/BipA [Vibrio fischeri MJ11]
Length = 622
Score = 676 bits (1745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/618 (54%), Positives = 442/618 (71%), Gaps = 8/618 (1%)
Query: 907 LHGQNLF--LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNE 964
LH + F +S I L AIIAHVDHGKTTL+D LL+QSGT R+MDSN+
Sbjct: 4 LHALSEFESMSTPQIDKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGETEERVMDSND 63
Query: 965 IEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMP 1024
IEKERGITI +KN +I +N RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMP
Sbjct: 64 IEKERGITILAKNTAINWNDHRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMP 123
Query: 1025 QTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSA 1084
QTRFVT+KA G KPIVV+NKIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SA
Sbjct: 124 QTRFVTQKAFAHGLKPIVVINKIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASA 183
Query: 1085 LHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRIL 1144
L+G+A NM PLF+AI+ V + + LQ+Q+ L+Y+SY+G IG+ R+
Sbjct: 184 LNGWATLEEGETGENMEPLFQAIVDNVDAPNVDVDGALQMQVSQLDYNSYVGVIGVARVT 243
Query: 1145 SGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGS 1204
G +K Q V ++ G D K+ + + GL+R V +A +GDI+ ITG+ E+ I
Sbjct: 244 RGSVKPNQQVTVV-GADGSKRNGKVGTVLGYLGLERHEVEQANAGDIIAITGLGELKISD 302
Query: 1205 TICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLR 1264
TICD + + L++DEPT+T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LR
Sbjct: 303 TICDVNNVEAMTPLSVDEPTVTMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALR 362
Query: 1265 VTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIF-KTLNGELYEPYENLF 1323
V Q + D + VSGRGELHL+ILIENMRREG+EL+VSRP VI K NG L EP+E +
Sbjct: 363 VEQTEDPDK-FRVSGRGELHLSILIENMRREGFELAVSRPEVIIKKDENGNLTEPFETVT 421
Query: 1324 VDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGL 1383
+D+ E +QG IM+ + R G+L ++ + K RVR+++ +PSRGLIGFQ EF+TLT G+GL
Sbjct: 422 IDVLEEHQGGIMENIGIRKGELTDMAPDGKGRVRMDFMMPSRGLIGFQTEFMTLTSGSGL 481
Query: 1384 ISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEG 1443
+ H F+ Y P + +G+R NGVLIS +GKA+ Y+L+ LQ+RGRLF H D VYEG
Sbjct: 482 LYHTFDHYGPHKGGT---IGQRSNGVLISNATGKALTYALFNLQERGRLFTEHADEVYEG 538
Query: 1444 MIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEIT 1503
+IGIH+R NDL VN +K KQLTN+R+SG+DEA L IK TLE A+EFI+DDELVE+T
Sbjct: 539 QVIGIHNRSNDLTVNCLKGKQLTNVRASGTDEAQTLSPAIKYTLEQALEFIDDDELVEVT 598
Query: 1504 PKNIRLRKRFLKENERKK 1521
P +IR+RKR L EN+RK+
Sbjct: 599 PASIRIRKRHLTENDRKR 616
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G + + N + IT L
Sbjct: 24 IAIIAHVDHGKTTLVDKLLQQSGTLESRGETEERVMDSNDIEKERGITILAKNTAINWND 83
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 84 HRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVI 143
Query: 176 NKIDK 180
NKID+
Sbjct: 144 NKIDR 148
>gi|408372736|ref|ZP_11170436.1| GTP-binding protein TypA [Alcanivorax hongdengensis A-11-3]
gi|407767711|gb|EKF76148.1| GTP-binding protein TypA [Alcanivorax hongdengensis A-11-3]
Length = 602
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 437/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT R+MDSN++EKERGITI SKN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTLGDRAGDIERVMDSNDLEKERGITILSKNTAIQWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAAGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFPVIY SAL+G A + +M PL +
Sbjct: 129 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFPVIYASALNGIAGLEADNLADDMTPLLQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V +++ P Q+QI SL+Y+SYLG IGIGR+ G+IK+ V ++ G D
Sbjct: 189 AIVDKVDYPDVDADGPFQMQISSLDYNSYLGIIGIGRVKRGKIKANSPVKVI-GADGNVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI I + GL+RV A +G+IV ITG++ + I T+CDP L L++DEPT+
Sbjct: 248 SGKILTIMGYHGLERVDAATASAGEIVCITGLDPLNISDTLCDPLNVEALTPLSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP AG++GKF+T+RQI+ RL+ E+K+N+ LRV + D + VSGRGELHL
Sbjct: 308 SMFFHVNTSPFAGQDGKFVTSRQIRERLEAELKHNVALRVEETGSADQ-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+V RP+VI + +G EPYE + D+EE +QG IM++L R ++
Sbjct: 367 SVLIENMRREGFELAVGRPQVIIREEDGVKQEPYETVIADVEEQHQGAIMEQLGLRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+E + K RVRLE+ +PSRGLIGF+++F+TLT GTG+++ F Y F D+ KR
Sbjct: 427 TNMEPDGKGRVRLEFLVPSRGLIGFRSQFLTLTSGTGILNSTFSHYGEF---KAGDMAKR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S GK + ++L+ LQ+RGR+ I+ N VYEG IIGIHSR NDL+VNP K KQL
Sbjct: 484 INGVLVSMVKGKVLGFALFNLQERGRMLIDPNVDVYEGQIIGIHSRGNDLVVNPTKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DE I L PI+ +LE A++FI DDELVE+TP ++RLRK+ L E ERK+
Sbjct: 544 TNMRASGTDENIVLTPPIRFSLEQALDFIEDDELVEVTPNHLRLRKKLLTETERKR 599
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTLGDRAGDIERVMDSNDLEKERGITILSKNTAIQWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAVDGPMPQTRFVTQKAFAAGLKPIVVI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|293611038|ref|ZP_06693337.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375135915|ref|YP_004996565.1| GTP-binding elongation factor family protein [Acinetobacter
calcoaceticus PHEA-2]
gi|427423869|ref|ZP_18914010.1| GTP-binding protein TypA [Acinetobacter baumannii WC-136]
gi|292826690|gb|EFF85056.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123360|gb|ADY82883.1| GTP-binding elongation factor family protein [Acinetobacter
calcoaceticus PHEA-2]
gi|425699529|gb|EKU69144.1| GTP-binding protein TypA [Acinetobacter baumannii WC-136]
Length = 611
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/606 (53%), Positives = 439/606 (72%), Gaps = 11/606 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL+QSG + R+MDSN +E ERGITI +KN SI +
Sbjct: 11 AIIAHVDHGKTTLVDKLLQQSGALGERAGEIERVMDSNALESERGITILAKNTSITWLDK 70
Query: 983 ---NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT+KA G K
Sbjct: 71 RTDTTYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGLK 130
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIV++NK+D+ +ARP+WV+D FDLFD L AT+EQLDFP++Y S L G A + +
Sbjct: 131 PIVIINKVDKPSARPDWVIDQVFDLFDNLGATDEQLDFPIVYASGLRGVAGPAPEELAED 190
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLFE I+ V + + P Q+QI SL+Y+S++G IG+GRI G +K V +++
Sbjct: 191 MTPLFETIVDIVEPPAVDVDGPFQMQISSLDYNSFVGVIGVGRIQRGSVKLNTPVTVIDK 250
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+ N +I +I + GL+R+ V A +GDIV ITGI+ + I TICDP LP L+
Sbjct: 251 EGNTRN-GRILKIMGYHGLERIDVESASAGDIVCITGIDALNISDTICDPKNVEALPALS 309
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPT+++ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV D ++VSG
Sbjct: 310 VDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSPDR-FKVSG 368
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RGELHL++LIENMRREG+E+ VSRP+VI K ++GE EPYEN+ D+EE +QG +M+++
Sbjct: 369 RGELHLSVLIENMRREGFEMGVSRPQVIIKEIDGERQEPYENVTFDVEEQHQGAVMEQMG 428
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
+R G++ N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y P +
Sbjct: 429 HRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHYGPVKQGT- 487
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
+ KR+NGVLIS G + Y+L+ LQDRGRLF VYEGMI+GI+SR +D++VNP
Sbjct: 488 --VAKRQNGVLISMVQGTCLGYALFSLQDRGRLFAKPQLEVYEGMIVGINSRSDDMVVNP 545
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
K KQLTN+R+SG+D+A+ L+ I+ TLE A+EFI DDELVE+TPK+IR+RKR+L ENER
Sbjct: 546 TKAKQLTNVRASGTDDALTLVPAIEYTLEQALEFIEDDELVEVTPKSIRIRKRYLTENER 605
Query: 1520 KKKLHK 1525
K+ K
Sbjct: 606 KRNRDK 611
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + E G + + N + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGERAGEIERVMDSNALESERGITILAKNTSITWLD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 KRTDTTYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|317494537|ref|ZP_07952950.1| GTP-binding protein TypA/BipA [Enterobacteriaceae bacterium
9_2_54FAA]
gi|365838388|ref|ZP_09379732.1| GTP-binding protein TypA [Hafnia alvei ATCC 51873]
gi|316917467|gb|EFV38813.1| GTP-binding protein TypA/BipA [Enterobacteriaceae bacterium
9_2_54FAA]
gi|364559815|gb|EHM37779.1| GTP-binding protein TypA [Hafnia alvei ATCC 51873]
Length = 607
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/596 (54%), Positives = 446/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGEREEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHNDMADDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + ++ P Q+QI L+Y++Y+G IGIGRI G+IK Q V +++ + K
Sbjct: 189 AIVDHVSPPQVEADAPFQMQISQLDYNNYVGVIGIGRIKRGKIKPNQQVTLIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ + A +GDI+ ITG+ E+ I TIC+ LP L++DEPT+
Sbjct: 248 NGKVGKVLTHMGLERIEADVAEAGDIIAITGLGELNISDTICEVGNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFCVNTSPFCGKEGKYVTSRQILERLQKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + D+G+R
Sbjct: 427 KNMVPDGKGRIRLDYIIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRPGDIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIH+R NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHTRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP ++R+RKR L EN+R++
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPVSVRIRKRHLTENDRRR 599
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGEREEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|386390259|ref|ZP_10075053.1| GTP-binding protein TypA [Haemophilus paraphrohaemolyticus HK411]
gi|385693569|gb|EIG24210.1| GTP-binding protein TypA [Haemophilus paraphrohaemolyticus HK411]
Length = 615
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/596 (55%), Positives = 438/596 (73%), Gaps = 6/596 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+ SGT ++ + R+MDSN++EKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLKLSGTLDTSRGDTEERVMDSNDLEKERGITILAKNTAINWND 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A + + NM PLF
Sbjct: 133 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLDHEDLAPNMDPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+++V + P Q+QI L+YS YLG IGIGRI G +K Q V I++ D
Sbjct: 193 EAIVEHVSPPDVHLEEPFQMQISQLDYSKYLGVIGIGRIKRGTVKPNQPVTIIDA-DGNT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
++ Q+ GL R EA +GDI+ ITG+ E+ I T+CD + LP L +DEPT
Sbjct: 252 RNGRVGQVLGHLGLQRYEAEEAYAGDIIAITGLGELNISDTLCDINNVEALPALTVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGK++T+RQI RL E+ +N+ LRV + D ++ VSGRGELH
Sbjct: 312 VTMFFCVNTSPFCGQEGKYVTSRQILERLKKELVHNVALRVEETD-DSDVFSVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VIFK ++G EPYE + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIFKEIDGRKQEPYEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+N+F+T+T GTGL+ F Y + ++G+
Sbjct: 431 VRDMVPDGKGRTRLEYIIPSRGLIGFRNDFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS +GKA+AYSL+ LQDRG+L + H +YEG +IGIHSR NDL VNP++ K+
Sbjct: 488 RINGVLISNGTGKALAYSLYALQDRGKLMVEHGAEIYEGQVIGIHSRSNDLTVNPLEGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
LTN+R+SG D+A+ L +P+K+TLE A+EFI+DDELVE+TP ++R+RK+ L E ERK
Sbjct: 548 LTNMRASGKDDALTLTTPVKMTLEQALEFIDDDELVEVTPTSVRIRKKLLTEVERK 603
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH---------------IGAYNVVTNHG 116
+ I+ HVDHGKT+L+D + K + + G T+ I A N N
Sbjct: 12 IAIIAHVDHGKTTLVDKLLKLSGTLDTSRGDTEERVMDSNDLEKERGITILAKNTAINWN 71
Query: 117 S--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
I +DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKIDK 180
INK+D+
Sbjct: 132 INKVDR 137
>gi|114776306|ref|ZP_01451351.1| GTP-binding protein TypA [Mariprofundus ferrooxydans PV-1]
gi|114553136|gb|EAU55534.1| GTP-binding protein TypA [Mariprofundus ferrooxydans PV-1]
Length = 605
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/597 (55%), Positives = 439/597 (73%), Gaps = 7/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY-NG 984
AIIAHVDHGKTTL+D LL+QSGT ++ +MDSN +EKERGITI +KN +I Y +
Sbjct: 9 AIIAHVDHGKTTLVDELLKQSGTLDAREDAVTCMMDSNVLEKERGITITAKNTAIRYGDN 68
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
T INIIDTPGHADFGGEVER+L+MVD V+LL+DA EGPMPQT+FVT KAL LG KPIVV+
Sbjct: 69 TLINIIDTPGHADFGGEVERVLNMVDGVVLLVDAREGPMPQTKFVTSKALALGLKPIVVI 128
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NKIDR + P+ VVD TFDLF L AT+EQL+FPV+Y SA +GYA N NM LF
Sbjct: 129 NKIDREGSDPDSVVDLTFDLFASLGATDEQLEFPVVYASAKNGYAMMNLGEESDNMTCLF 188
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+ I+ +V + +PLQ+ +L++ Y+G+I IGR+ +GRIK+ QD+ +++ D
Sbjct: 189 DTIINHVDAPHGDPEHPLQMLATTLDWDEYIGRIVIGRVANGRIKTGQDITVVHA-DSSQ 247
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI ++ F G+ R + EA +GDI+ + GIE I IG TI P LP++++DEPT
Sbjct: 248 ENFKITKLLGFLGMHRTEITEAEAGDIIAVAGIEHINIGETIASKEDPIALPVIHVDEPT 307
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
L++ VNNSPLAG EGK ITTRQI++RL EI+ N+ +RV + D IY+VSGRGELH
Sbjct: 308 LSMELHVNNSPLAGTEGKLITTRQIRDRLMREIRTNVAMRVEETDSAD-IYKVSGRGELH 366
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
+ IL+E MRREG+E++VSRP VI +T++G EPYE++ VD+E QG +++KL RG +
Sbjct: 367 IGILLETMRREGFEMAVSRPTVIVRTIDGVKQEPYEHVTVDVESEYQGSVIEKLGKRGAE 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+ ++E + R+E+ P+R LIG+ +EF+T TRGTG++ HVF Y P+ L
Sbjct: 427 MTSMETDADGSTRIEFMSPTRSLIGYTSEFLTDTRGTGIMHHVFHSYGPYVGA----LPG 482
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVLIS +G++VA++LWKLQ+RG++FI + +YEGMIIGI+SRD D+ VNPIKEK+
Sbjct: 483 RTNGVLISMENGESVAFALWKLQERGKMFIGSGEKLYEGMIIGINSRDTDMTVNPIKEKK 542
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L+N+R+SG DEAI L+ P+K+TLE AIEFI DDELVEITPK+IRLRKR LKENERK+
Sbjct: 543 LSNVRASGKDEAIDLVPPLKLTLERAIEFIADDELVEITPKSIRLRKRHLKENERKR 599
Score = 64.3 bits (155), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRK-----------------TNVVFSEAGGITQHIGAYNVVTN 114
+ I+ HVDHGKT+L+D + K +NV+ E G IT I A N
Sbjct: 8 IAIIAHVDHGKTTLVDELLKQSGTLDAREDAVTCMMDSNVLEKERG-IT--ITAKNTAIR 64
Query: 115 HGS---ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPL 171
+G I +DTPGH F R + D VVL+V A +G MPQT+ + A G+
Sbjct: 65 YGDNTLINIIDTPGHADFGGEVERVLNMVDGVVLLVDAREGPMPQTKFVTSKALALGLKP 124
Query: 172 IVAINKIDKLDINLDRIKQ---DLISEQVIPEEYGGASPFISISAKTGVGINKLLE 224
IV INKID+ + D + DL + +E P + SAK G + L E
Sbjct: 125 IVVINKIDREGSDPDSVVDLTFDLFASLGATDEQ-LEFPVVYASAKNGYAMMNLGE 179
>gi|50083926|ref|YP_045436.1| GTP-binding elongation factor family protein [Acinetobacter sp. ADP1]
gi|49529902|emb|CAG67614.1| GTP-binding elongation factor family protein [Acinetobacter sp. ADP1]
Length = 610
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/602 (53%), Positives = 439/602 (72%), Gaps = 11/602 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAHVDHGKTTL+D LL+QSG R+MDSN +E ERGITI +KN SI++
Sbjct: 11 AIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTSIKWLDK 70
Query: 983 ---NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
RINI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT+KA G K
Sbjct: 71 RTDTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGLK 130
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
PIV++NK+D+ +ARP+WV+D FDLFD L AT+EQLDFP++Y S L G A + + +
Sbjct: 131 PIVIINKVDKPSARPDWVIDQVFDLFDNLGATDEQLDFPIVYASGLRGVAGPSPEELAED 190
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNG 1159
M PLFE I+ V +++ P Q+QI SL+Y+S++G IG+GRI G +K V +++
Sbjct: 191 MTPLFETIVDIVEPPAVDADGPFQMQISSLDYNSFVGVIGVGRIQRGSVKLNTPVTVIDK 250
Query: 1160 PDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLN 1219
+ N +I +I + GL+R+ V A +GDIV ITGI+ + I TICDP LP L+
Sbjct: 251 EGNTRN-GRILKIMGYHGLERIDVESASAGDIVCITGIDALNISDTICDPKNVEALPPLS 309
Query: 1220 IDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSG 1279
+DEPT+++ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV D ++VSG
Sbjct: 310 VDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSPDR-FKVSG 368
Query: 1280 RGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLN 1339
RGELHL++LIENMRREG+EL VSRP+VI K ++GE EPYEN+ D+EE +QG +M+++
Sbjct: 369 RGELHLSVLIENMRREGFELGVSRPQVIIKEIDGEKQEPYENVTFDVEEQHQGAVMEQMG 428
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
+R G++ N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y P +
Sbjct: 429 HRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHYGPVKQGT- 487
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNP 1459
+ KR+NGVLIS G + Y+L+ LQDRGRLF VYEGMI+GI+SR +D++VNP
Sbjct: 488 --VAKRQNGVLISMVQGTCLGYALFSLQDRGRLFAKPQLEVYEGMIVGINSRSDDMVVNP 545
Query: 1460 IKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENER 1519
K KQLTN+R+SG+D+A+ L I+ TLE A+EFI DDELVE+TPK+IR+RKR+L ENER
Sbjct: 546 TKAKQLTNVRASGTDDALTLTPAIEYTLEQALEFIEDDELVEVTPKSIRIRKRYLTENER 605
Query: 1520 KK 1521
K+
Sbjct: 606 KR 607
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTSIKWLD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 KRTDTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|322513926|ref|ZP_08067003.1| glutathione-disulfide reductase [Actinobacillus ureae ATCC 25976]
gi|322120261|gb|EFX92214.1| glutathione-disulfide reductase [Actinobacillus ureae ATCC 25976]
Length = 630
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 444/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 28 AIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDLEKERGITILAKNTAINWND 87
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 88 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 147
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PLF
Sbjct: 148 NKVDRLGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGVAGLEHEDLAEDMTPLF 207
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
+AI+ +V K N P Q+QI L+Y++Y+G IGIGRI G IK Q V +++ + K
Sbjct: 208 QAIVDHVEPPKVELNAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQTVTVIDS-EGKT 266
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
K+ Q+ GL R EA +GDI+ ITG+ E+ I TICD + LP L +DEPT
Sbjct: 267 RNGKVGQVLGHLGLQRYEATEAFAGDIIAITGLGELNISDTICDINNVEALPALTVDEPT 326
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 327 VTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 385
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ N + EP+E + +DIEE +QG +M+ L R G+
Sbjct: 386 LSVLIENMRREGYELAVSRPKVIYREENDKKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 445
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IPSRGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 446 VKDMIPDGKGRTRLEYVIPSRGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 502
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 503 RKNGVLISNATGKALAYALFGLQERGKLMIDHGVDVYEGQIIGIHSRSNDLTVNCLQGKK 562
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+++TLE A+EFI+DDELVE+TP++IR+RKR L EN+RK+
Sbjct: 563 LTNMRASGKDDAIVLTTPVRMTLEQALEFIDDDELVEVTPQSIRVRKRLLTENDRKR 619
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 56 EYNKNITAESLVRAPI--VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH-------- 105
+ NK+I+ ++L + + I+ HVDHGKT+L+D + + + E G
Sbjct: 9 QLNKDISMQNLDINKLRNIAIIAHVDHGKTTLVDKLLQQSGTLGETRGDADERVMDSNDL 68
Query: 106 -------IGAYNVVTNHGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQ 156
I A N N I +DTPGH F R + D V+LVV A DG MPQ
Sbjct: 69 EKERGITILAKNTAINWNDYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQ 128
Query: 157 TREAIAHAKISGVPLIVAINKIDKLDINLDRI 188
TR A G+ IV INK+D+L D +
Sbjct: 129 TRFVTQKAFAHGLKPIVVINKVDRLGARPDWV 160
>gi|118602396|ref|YP_903611.1| GTP-binding protein TypA [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567335|gb|ABL02140.1| GTP-binding protein TypA [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 605
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/600 (54%), Positives = 447/600 (74%), Gaps = 5/600 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QS TF + R+MDSN++EKERGITI SKN +I+++
Sbjct: 9 AIIAHVDHGKTTLVDKLLEQSQTFDERFESTDRMMDSNDLEKERGITISSKNTAIKWHDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGH+DFGGEVER+LSMVD+VLLL+DA EGPMPQTRFVT+K+ G PIVV+N
Sbjct: 69 HINIVDTPGHSDFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTKKSFDQGLNPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ ARP+WV+D FDLFD+L AT+EQLDFP+IY S+++GYA+ R G+M P+FE
Sbjct: 129 KIDKDAARPDWVIDQVFDLFDQLGATDEQLDFPIIYASSINGYASLEDDVRLGDMTPMFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K+V + + N LQ+Q+ +L+YSS++G I IGRI G IK VV+++ ++ +
Sbjct: 189 TIIKHVKAPEVDINAFLQMQVTALDYSSFIGTIAIGRITRGTIKKNMQVVVVDTQGNE-H 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KAKI ++ F GL+R+ + A +G+I+ ITGIE I I TICDP LP L++DEPT+
Sbjct: 248 KAKIANLQGFLGLERIDTDSAQAGNIIAITGIEGISISDTICDPEAIEALPPLSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG++GKFIT+R I +RL+ E+ N+ LRV ++ D S + VSGRGELHL
Sbjct: 308 SMAFRVNDSPFAGQDGKFITSRNICDRLEKELIYNVALRV-ESTTDPSEFIVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIE MRRE +EL+V RP+VI + ++ + EP+E+L VD+E +QG +M+KL R +L
Sbjct: 367 SILIETMRRESFELAVGRPQVILREIDDVICEPFEDLSVDVEAQHQGTVMEKLGERKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + R++L + IP+RGLIGF+ EF+T T GTGL++ F+ Y P + + +G+R
Sbjct: 427 TNMIPDGNGRIKLYFNIPARGLIGFRTEFLTATTGTGLMNSTFDAYKP---QKQGKIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NG LIS G+AVAY+++ LQ G+ F+ HN +YEGM++GIH+RD DL++N +K KQL
Sbjct: 484 SNGSLISMNQGQAVAYAIFNLQKSGKFFVEHNTDIYEGMVVGIHTRDKDLVINVMKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TN+R+SG+DEAI LI IK+ LE A+EFI+DDELVEITP NIR+RKR L ENERK+ K
Sbjct: 544 TNVRASGTDEAISLIPAIKLDLEQALEFIDDDELVEITPHNIRIRKRLLTENERKRARRK 603
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 21/142 (14%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF----------- 120
+ I+ HVDHGKT+L+D + + + F E T + N + IT
Sbjct: 8 IAIIAHVDHGKTTLVDKLLEQSQTFDERFESTDRMMDSNDLEKERGITISSKNTAIKWHD 67
Query: 121 -----LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+DTPGH F R + D V+L+V A +G MPQTR + G+ IV I
Sbjct: 68 YHINIVDTPGHSDFGGEVERVLSMVDSVLLLVDAQEGPMPQTRFVTKKSFDQGLNPIVVI 127
Query: 176 NKIDKLDINLDRIKQDLISEQV 197
NKIDK D + D + +QV
Sbjct: 128 NKIDK-----DAARPDWVIDQV 144
>gi|37524257|ref|NP_927601.1| GTPase [Photorhabdus luminescens subsp. laumondii TTO1]
gi|36783680|emb|CAE12533.1| GTPase [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 606
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 440/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGDRATTTERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAHGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALMGIAGTDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V K + N Q+QI L+Y++Y+G IGIGRI G +K Q+V I++ + K
Sbjct: 189 AIVDHVEPPKVDLNGSFQMQISQLDYNNYVGVIGIGRIKRGTVKPNQNVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ GL+R+ +A +GDIV ITG+ E+ I T+CD + LP L +DEPT+
Sbjct: 248 NGKIGKVLGHLGLERIESEQAEAGDIVAITGLGELNISDTLCDTNAVEALPPLAVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP GREGK++T+RQI RL E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMYFCVNTSPFCGREGKYVTSRQILERLKKELVHNVALRVEETEDPDA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EP+E + +DIEE +QG +MQ L R DL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPFEQVTLDIEEQHQGDVMQGLGERKADL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+R
Sbjct: 427 RDMLPDGKGRVRLDYVIPSRGLIGFRTEFMTMTSGTGLLYATFSHYDDI---RPGEIGRR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+IS GKAVAY+L+ LQ+RG+LF+ H VYEG +IGIHSR NDL VN + K+L
Sbjct: 484 QNGVMISNGQGKAVAYALYSLQERGKLFLGHGAEVYEGQVIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L IK TLE A+EFI+DDELVE+TP +IRLRKR L ENER++
Sbjct: 544 TNVRASGTDEATTLSPHIKKTLEQALEFIDDDELVEVTPVSIRLRKRHLTENERRR 599
Score = 68.6 bits (166), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGDRATTTERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAHGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|358010713|ref|ZP_09142523.1| GTP-binding elongation factor family protein [Acinetobacter sp.
P8-3-8]
Length = 612
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/610 (52%), Positives = 442/610 (72%), Gaps = 11/610 (1%)
Query: 918 NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKN 977
+I L AIIAHVDHGKTTL+D LL+QSG R+MDSN +E ERGITI +KN
Sbjct: 3 DIKTLRNIAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKN 62
Query: 978 CSIEY------NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
+I++ RINI+DTPGHADFGGEVER++SMVD VLLL+D+ EGPMPQTRFVT+
Sbjct: 63 TAIKWLDKRTDTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQ 122
Query: 1032 KALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANE 1091
KA G KPIV++NK+D+ +ARP+WV+D FDLFD L T+EQLDFP++Y S L G A
Sbjct: 123 KAFARGLKPIVIINKVDKPSARPDWVIDQVFDLFDNLGGTDEQLDFPIVYASGLRGVAGP 182
Query: 1092 NSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ + +M PLFE I+ V +++ P Q+QI SL+Y+S++G IG+GRI G IK+
Sbjct: 183 SPEELAEDMTPLFETIVDIVEPPSVDADGPFQMQISSLDYNSFVGVIGVGRIQRGSIKTN 242
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSK 1211
V +++ D K +I +I + GL+RV V+ A +GDIV ITG++ + I TICDP
Sbjct: 243 TPVTVID-KDGKTRNGRILKIMGYHGLERVDVDTAQAGDIVCITGLDALNISDTICDPKN 301
Query: 1212 PNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHD 1271
LP L++DEPT+++ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV
Sbjct: 302 VEALPPLSVDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSP 361
Query: 1272 DSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQ 1331
D ++VSGRGELHL++LIE MRREG+E+ VSRP+VI K ++GE EPYEN+ D+EE +Q
Sbjct: 362 DR-FKVSGRGELHLSVLIETMRREGFEMGVSRPQVIMKEVDGETQEPYENVTFDVEEQHQ 420
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G +M+++ R G+L N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y
Sbjct: 421 GSVMEQMGNRKGELTNMEVDGKGRMRIEATVPSRGLIGFRSEFLTITSGTGIMTSSFSHY 480
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
P + + KR+NGVL+S +G +A++L+ LQDRGRLF VYEGMI+G++SR
Sbjct: 481 GPAKQGA---VAKRQNGVLVSMVNGTCLAFALFTLQDRGRLFAEPQLEVYEGMIVGMNSR 537
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
+D+ VNP K KQLTN+R+SG+DEA+ L IK TLE A+EFI DDELVE+TPK++R+RK
Sbjct: 538 SDDMTVNPTKAKQLTNMRASGTDEALTLTPAIKFTLEQALEFIEDDELVEVTPKSVRIRK 597
Query: 1512 RFLKENERKK 1521
+FL EN+RK+
Sbjct: 598 KFLTENDRKR 607
Score = 64.7 bits (156), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + N + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILAKNTAIKWLD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 KRTDTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|407939642|ref|YP_006855283.1| translation initiation factor IF-2 [Acidovorax sp. KKS102]
gi|407897436|gb|AFU46645.1| translation initiation factor IF-2 [Acidovorax sp. KKS102]
Length = 955
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/539 (60%), Positives = 433/539 (80%), Gaps = 1/539 (0%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS+K+S VIK LMK+GQMVTINQ LDQ+TAMI+VEEMGH A + L+DPE+F ++ +
Sbjct: 390 MSIKASEVIKALMKMGQMVTINQPLDQDTAMIVVEEMGHKAVVAALDDPEAFTDDDAGQK 449
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE L RAP+VT+MGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T G ++F
Sbjct: 450 -DAELLPRAPVVTVMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETPRGMVSF 508
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGA+ TDIV+LVVAADDGVMPQT+EAI HAK + VP++VAI K DK
Sbjct: 509 LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAKVPIVVAITKADK 568
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D N DR+KQ+L+ E+V+PEEYGG SPF+++S+KTG+GI+ LLE + LQAE+LELKAPV
Sbjct: 569 PDANPDRVKQELVVEEVVPEEYGGDSPFVAVSSKTGMGIDDLLEQVLLQAEVLELKAPVE 628
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
AKG++IE++LDKG+GPVATVL+QSGTL+ D+V+AG + GR+R+ML+ENGK AGP
Sbjct: 629 AMAKGLVIEAQLDKGRGPVATVLVQSGTLKVGDVVLAGQTSGRVRAMLDENGKPAKTAGP 688
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEIQGL+ VP +G+E V+ +E++AREI +R GKFR+ KL+KQ+ K EN+FN++
Sbjct: 689 SIPVEIQGLSDVPQAGDEFMVLSDERRAREIATYRAGKFRNTKLAKQQAAKLENVFNEMT 748
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+V+ L IIIK DV GS+E L SL LSTD++++Q+++ VG I+ESD+NLAIASKAI
Sbjct: 749 AGEVQTLPIIIKADVQGSQEALAASLLKLSTDEIRVQLVYAGVGGISESDVNLAIASKAI 808
Query: 421 IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA RKLA+ +++N+ Y+NIIY+ + E+K+ ++ ++ E++E LG AEIR
Sbjct: 809 VIGFNVRADAGARKLAESSDVNLHYYNIIYDAVDELKAAMSGMLAPEQREEALGTAEIRT 868
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V + +K+ +AG Y+ G + R+ K R+LR+ +I+TGE++S++R KD+VKEVK GFEC
Sbjct: 869 VFVASKIGTVAGSYVTSGQVTRNCKFRLLRDNVVIYTGEVESVRRLKDDVKEVKEGFEC 927
Score = 60.8 bits (146), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ R + I I + +E RG+ F
Sbjct: 462 VMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETPRGMVSF------------ 508
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT+ + A +V + K
Sbjct: 509 ---LDTPGHEAFTAMRARGAQATDIVILVVAADDGVMPQTKEAIKHAKAAKVPIVVAITK 565
Query: 1047 IDRSNARPE 1055
D+ +A P+
Sbjct: 566 ADKPDANPD 574
>gi|16272804|ref|NP_439024.1| GTP-binding protein [Haemophilus influenzae Rd KW20]
gi|260579955|ref|ZP_05847785.1| GTP-binding protein TypA/BipA [Haemophilus influenzae RdAW]
gi|1176325|sp|P44910.1|TYPA_HAEIN RecName: Full=GTP-binding protein TypA/BipA homolog
gi|1573881|gb|AAC22523.1| GTP-binding protein [Haemophilus influenzae Rd KW20]
gi|260093239|gb|EEW77172.1| GTP-binding protein TypA/BipA [Haemophilus influenzae RdAW]
Length = 616
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 448/597 (75%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINTVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y ++G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---EIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANIEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|118594128|ref|ZP_01551475.1| translation initiation factor IF-2 [Methylophilales bacterium
HTCC2181]
gi|118439906|gb|EAV46533.1| translation initiation factor IF-2 [Methylophilales bacterium
HTCC2181]
Length = 816
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/545 (60%), Positives = 428/545 (78%), Gaps = 14/545 (2%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK+ VIK LM +G MVTINQVLDQ+TAMI VEEMGH A++ NDPES L N
Sbjct: 252 MSVKAGEVIKVLMGMGMMVTINQVLDQDTAMIAVEEMGHQPQAAEDNDPESLL------N 305
Query: 61 ITAESLV------RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTN 114
I E LV R P+VT+MGHVDHGKTSLLDYIR V +EAGGITQHIGAY+V T+
Sbjct: 306 I--EDLVEPILEARPPVVTVMGHVDHGKTSLLDYIRTAKVASAEAGGITQHIGAYHVETS 363
Query: 115 HGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
G ITFLDTPGHEAF+AMRARGAK TDIVVL VA+DDGVMPQT EAI H+K + VP+IVA
Sbjct: 364 KGMITFLDTPGHEAFSAMRARGAKATDIVVLAVASDDGVMPQTIEAINHSKAAEVPMIVA 423
Query: 175 INKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILE 234
INK+DK + N +++K +L++ +VIPEE GG + F+ +SAKTG GI+ LL++I LQAEILE
Sbjct: 424 INKMDKPEANPEKVKSELLTHEVIPEELGGDAIFVEVSAKTGQGIDDLLDSILLQAEILE 483
Query: 235 LKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKN 294
LKA TPA+G+++E RLDKG+GPV T+L+QSG L D ++AG+++GR+R+M++E+GK
Sbjct: 484 LKASKNTPARGIVVEGRLDKGRGPVTTLLVQSGILSPGDTILAGSAFGRVRAMIDESGKK 543
Query: 295 ILEAGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTEN 354
+ EAGPSIPVE+ GL+ VP +GEE VI +EKKARE+ LFRQGKFRDVK +KQ+ K EN
Sbjct: 544 VEEAGPSIPVEVIGLSDVPNAGEEFIVINDEKKAREVALFRQGKFRDVKFAKQQASKLEN 603
Query: 355 MFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLA 414
+F+ + + ++K L +IIK+DV GS E L SL LSTD+VK+ VIH+AVG +NESDINLA
Sbjct: 604 IFDQMAEGEIKVLPLIIKSDVQGSYEALAGSLGKLSTDEVKVNVIHSAVGPVNESDINLA 663
Query: 415 IASKAIIIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLG 474
AS A+++ FNVRAD RKLA +++RY++IIY + E+K+ ++ ++ EK+EN+LG
Sbjct: 664 TASNAVVLAFNVRADGGARKLADSLEVDVRYYSIIYEAVDEVKAALSGMLSPEKRENILG 723
Query: 475 LAEIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVK 534
L EIR++ +K+ IAGCY+LEGLIR++SKIR+LR+ +I+ GELDSLKRFKD++KEVK
Sbjct: 724 LVEIREIFKASKIGTIAGCYVLEGLIRKNSKIRLLRDSVVIYDGELDSLKRFKDDIKEVK 783
Query: 535 AGFEC 539
+ FEC
Sbjct: 784 SNFEC 788
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D++ A++ + + GIT +E +
Sbjct: 323 VMGHVDHGKTSLLDYIR------------TAKVASA----EAGGITQHIGAYHVETSKGM 366
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGH F R D V+L + + +G MPQT + IV +NK
Sbjct: 367 ITFLDTPGHEAFSAMRARGAKATDIVVLAVASDDGVMPQTIEAINHSKAAEVPMIVAINK 426
Query: 1047 IDRSNARPEWV 1057
+D+ A PE V
Sbjct: 427 MDKPEANPEKV 437
>gi|389708571|ref|ZP_10186580.1| GTP-binding elongation factor family protein [Acinetobacter sp. HA]
gi|388610429|gb|EIM39551.1| GTP-binding elongation factor family protein [Acinetobacter sp. HA]
Length = 611
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/614 (52%), Positives = 441/614 (71%), Gaps = 11/614 (1%)
Query: 918 NIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKN 977
+I L AIIAHVDHGKTTL+D LL+QSG R+MDS IE ERGITI +KN
Sbjct: 3 DIKTLRNIAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKN 62
Query: 978 CSIEYNGTR------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
+I++ R INI+DTPGHADFGGEVER+LSMVD VLLL+D+ EGPMPQTRFVT+
Sbjct: 63 TAIKWTDARTNTEYRINIVDTPGHADFGGEVERVLSMVDCVLLLVDSQEGPMPQTRFVTQ 122
Query: 1032 KALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANE 1091
KA G KPIV++NK+D+ +ARP+WV+D FDLFD L T+EQLDFPV+Y S L G A
Sbjct: 123 KAFARGLKPIVIINKVDKPSARPDWVIDQVFDLFDNLGGTDEQLDFPVVYASGLRGVAGP 182
Query: 1092 NSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ + +M PLF+ I+ V + + P Q+Q+ SL+Y+S++G IG+GRI G +K
Sbjct: 183 SPEELADDMTPLFQTIVDIVEPPAVDVDGPFQMQVSSLDYNSFVGVIGVGRIQRGSVKLN 242
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSK 1211
V +++ + N +I +I + GL+RV V A +GDIV ITGI+ + I TICDP
Sbjct: 243 TPVTVIDKEGNTRN-GRILKIMGYHGLERVDVESAQAGDIVCITGIDALNISDTICDPKA 301
Query: 1212 PNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHD 1271
LP L++DEPT+++ F VNNSP AG+EGKF+T+R I+ RLD E+ +N+ LRV
Sbjct: 302 VEALPPLSVDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDSP 361
Query: 1272 DSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQ 1331
D ++VSGRGELHL++LIENMRREG+E+ VSRP+VI K ++GE EPYEN+ D+EE +Q
Sbjct: 362 DR-FKVSGRGELHLSVLIENMRREGFEMGVSRPQVIIKEIDGEKQEPYENVTFDVEEQHQ 420
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G +M+++ +R G++ N+E++ K R+R+E +PSRGLIGF++EF+T+T GTG+++ F Y
Sbjct: 421 GAVMEQMGHRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHY 480
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
P + + KR+NGVLIS G + Y+L+ LQDRGRLF VYEGMI+GI+SR
Sbjct: 481 GPMKQGT---VAKRQNGVLISMVQGTCLGYALFTLQDRGRLFAKPQLEVYEGMIVGINSR 537
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
+D++VNP K KQLTN+R+SG+D+A+ L+ I+ TLE A+EFI DDELVE+TPK+IR+RK
Sbjct: 538 SDDMVVNPTKAKQLTNVRASGTDDALTLVPAIEYTLEQALEFIEDDELVEVTPKSIRIRK 597
Query: 1512 RFLKENERKKKLHK 1525
R+L ENERK+ K
Sbjct: 598 RYLTENERKRNRAK 611
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 22/139 (15%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + + G + + + + IT L
Sbjct: 10 IAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKNTAIKWTD 69
Query: 122 ------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGV 169
DTPGH F R + D V+L+V + +G MPQTR A G+
Sbjct: 70 ARTNTEYRINIVDTPGHADFGGEVERVLSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGL 129
Query: 170 PLIVAINKIDKLDINLDRI 188
IV INK+DK D +
Sbjct: 130 KPIVIINKVDKPSARPDWV 148
>gi|431928996|ref|YP_007242030.1| GTP-binding protein TypA/BipA [Pseudomonas stutzeri RCH2]
gi|431827283|gb|AGA88400.1| GTP-binding protein TypA/BipA [Pseudomonas stutzeri RCH2]
Length = 606
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/597 (55%), Positives = 440/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLR SGT + + N R+MDSN+ EKERGITI +KN ++++NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA K G +PIVVVN
Sbjct: 69 NINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G A + + NM LF+
Sbjct: 129 KIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGMDHEKMDDNMDALFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP K + + P Q+QI L+Y+S+LG IGIGRI G IK+ V + G D K
Sbjct: 189 AIIDHVPSPKVDLDGPFQMQISQLDYNSFLGVIGIGRIARGTIKANSPVTAI-GADGKKR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I +I GL RV V EA +GDIV ++G++E+ I T+CD + LP L +D+PT+
Sbjct: 248 NGRILKIMGHSGLQRVEVQEAEAGDIVCVSGMDELYISDTLCDQNNVEALPPLTVDQPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP AG+EGKF+T+R IK+RL+ E+ +N+ LRV + ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFAGKEGKFVTSRNIKDRLEKELLHNVALRVEPGDSPEK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPR-VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+EL+V RP VI + GE EPYEN+ +DIEE +QG +M+++ R GD
Sbjct: 367 SVLIETMRREGFELAVGRPEVVIIENEAGEKQEPYENVTIDIEEQHQGPVMEQMGLRKGD 426
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
L N+ + K RVRLEY IP+RGLIGF+N F+TLT G+G+++ F Y ++
Sbjct: 427 LSNMVPDGKGRVRLEYTIPARGLIGFRNNFLTLTSGSGILTSTFSHYGAI---KAGEVTN 483
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVL+S +G A+ YSL LQ RG+LF+ D +YEG + GI+SRDNDL++NP K K+
Sbjct: 484 RQNGVLVSMATGTALTYSLETLQARGKLFLAPGDEIYEGQLCGINSRDNDLVLNPTKGKK 543
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
L N+R+SG DE I L+ PIK TLE A+EFI DDELVE+TPK+IRLRK++L EN+RK+
Sbjct: 544 LDNMRASGKDEVIALVPPIKFTLEQALEFIADDELVEVTPKSIRLRKKYLNENDRKR 600
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------------EAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + + + + GIT + N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNTALKWNG 67
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+I +DTPGH F R + D V+LVV A DG MPQTR A +G+ IV +
Sbjct: 68 YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKAFKAGLRPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
>gi|260581692|ref|ZP_05849489.1| GTP-binding protein TypA/BipA [Haemophilus influenzae NT127]
gi|260095285|gb|EEW79176.1| GTP-binding protein TypA/BipA [Haemophilus influenzae NT127]
Length = 616
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/597 (55%), Positives = 447/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +++ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKYVESPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINAVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ +F+T+T GTGL+ F Y ++G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGDFMTMTSGTGLLYSSFSHYDEIKGG---EIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+T ++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTSESIRIRKKLLTENDRKR 605
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G + + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDVDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
>gi|260912759|ref|ZP_05919245.1| glutathione-disulfide reductase [Pasteurella dagmatis ATCC 43325]
gi|260633137|gb|EEX51302.1| glutathione-disulfide reductase [Pasteurella dagmatis ATCC 43325]
Length = 616
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/597 (55%), Positives = 440/597 (73%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT ++ + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTLETSRSDSDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER++SMVD VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVMSMVDCVLLIVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL+G A +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIIYASALNGVAGLEHDDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+KYV K + P Q+QI L+Y+SY+G IGIGRI G +K Q V +++ + K
Sbjct: 194 EAIVKYVEPPKVELDQPFQMQISQLDYNSYVGVIGIGRIKRGSVKPNQTVTVIDS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R A +GDI+ +TG+ E+ I TICD + LP L++DEPT
Sbjct: 253 RTGKIGQVLGHLGLQRYETERAYAGDIIALTGLGELNISDTICDINNVEALPALSVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGK++T+RQI RL+ E+ +N+ LRV + D+ + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFCGKEGKYVTSRQILERLNKELVHNVALRVEETPDPDA-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRPRVI+K NG EP+E + +DIEE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPRVIYKEENGRKQEPFEQVTIDIEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K R RLEY IPSRGLIGF+ EF+T+T GTGL+ F Y + ++G+
Sbjct: 432 VRDMVPDGKGRTRLEYIIPSRGLIGFRGEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+L+ LQ+RG+L I+H VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALAYALFGLQERGKLMIDHGAEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG DEA+ L+ P++ +LE AIEFI+DDELVE+TP +IR+RK+ L E +RK+
Sbjct: 549 LTNMRASGKDEAVVLVPPVRFSLEQAIEFIDDDELVEVTPSSIRIRKKLLTETDRKR 605
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAG-----------------GITQHIGAYNVVTN 114
+ I+ HVDHGKT+L+D + + + + GIT I A N N
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTLETSRSDSDERVMDSNDLEKERGIT--ILAKNTAIN 70
Query: 115 HGS--ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLI 172
I +DTPGH F R + D V+L+V A DG MPQTR A G+ I
Sbjct: 71 WNDYRINIVDTPGHADFGGEVERVMSMVDCVLLIVDAFDGPMPQTRFVTQKAFAHGLKPI 130
Query: 173 VAINKIDK 180
V INK+D+
Sbjct: 131 VVINKVDR 138
>gi|339478042|ref|YP_004706862.1| GTP-binding protein TypA/BipA [Candidatus Moranella endobia PCIT]
gi|338172593|gb|AEI74994.1| GTP-binding protein TypA/BipA [Candidatus Moranella endobia PCIT]
Length = 606
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/596 (55%), Positives = 443/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D LLRQSGT + + RIMDSN++EKERGITI +KN +I +
Sbjct: 9 AIVAHVDHGKTTLVDQLLRQSGTLSDCTDASERIMDSNDLEKERGITILAKNTAINWRDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+K+ G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDARDGPMPQTRFVTQKSFSYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR R +WVVD FDLF L AT++QL+FP++YTSAL+G A + +M PLFE
Sbjct: 129 KVDRHGVRIDWVVDQVFDLFVNLGATDDQLNFPIVYTSALNGIAGLEYEEMADDMTPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+K++ K + N P Q+QI L+Y++Y+G IG+GRI SG +K Q+V I++ KP
Sbjct: 189 AIVKHIDAPKVDVNGPFQMQISQLDYNNYVGVIGVGRINSGSVKPNQNVTIVD-IAGKPR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ QI GL R+ A +GDI+ ITG+ E+ I TICDP+K LP L +DEPT+
Sbjct: 248 HGKVGQILGHIGLQRIEYKLAEAGDIIAITGLGELNISDTICDPAKVESLPPLKVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGK++T+RQI RL E+ +N+ LRV + +D+ + VSGRGELHL
Sbjct: 308 SMLFGVNTSPFCGKEGKYVTSRQILARLQKELVHNVALRVEETADNDN-FLVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+T+ G EP+E + +DIEE +QG +M+ + R G++
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFRTVEGVKQEPFELVTMDIEEQHQGPVMEAIGIRKGEI 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + RVRL+Y IPSRGLIGF+ F+T+T GTGL+ F Y N +LG+R
Sbjct: 427 RDMLPDSTGRVRLDYVIPSRGLIGFRTNFLTMTSGTGLLYSTFSHYD---NVRYGELGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVAY+L+ LQDRGRL ++H VY G IIGIH+R NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAYALYSLQDRGRLLLSHGAEVYVGQIIGIHTRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA LI I+++LE A+EFI+DDELVE+TPK+IRLRKR+L ENERK+
Sbjct: 544 TNMRASGTDEATTLIPAIQMSLEQALEFIDDDELVEVTPKSIRLRKRYLSENERKR 599
Score = 68.2 bits (165), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + S+ ++ I N + IT L
Sbjct: 8 IAIVAHVDHGKTTLVDQLLRQSGTLSDCTDASERIMDSNDLEKERGITILAKNTAINWRD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR + G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDARDGPMPQTRFVTQKSFSYGLKPIVVI 127
Query: 176 NKIDKLDINLDRI 188
NK+D+ + +D +
Sbjct: 128 NKVDRHGVRIDWV 140
>gi|392535421|ref|ZP_10282558.1| GTP-binding protein [Pseudoalteromonas arctica A 37-1-2]
Length = 607
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/596 (55%), Positives = 432/596 (72%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN+IEKERGITI +KN +I +N
Sbjct: 10 AIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAISWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER+LSM D+VLLL+DA EGPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 HINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ +RP+WV+D FDLFD L AT+EQLDF VIY SA++G+A + NM P+F+
Sbjct: 130 KIDKPGSRPDWVMDQIFDLFDNLGATDEQLDFKVIYASAINGWATLDLDEPSDNMEPMFK 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ V + Q+QI L+Y+SY+G +GIGRI G + Q V I++ D
Sbjct: 190 MIVDEVSPPDADPEGDFQMQISQLDYNSYVGVVGIGRIKRGSVAPNQQVTIISA-DGTTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI ++ + GL+R+ + A +G+IV +TGI E+ I T+C P LP L++DEPT+
Sbjct: 249 NGKIGAVQSYLGLERIETDRAYAGNIVTVTGIGELKISDTVCFPGNVEALPPLSVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VNNSP G+EGKF+T+R I+ RLD E+ +N+ LRV DS + VSGRGELHL
Sbjct: 309 TMTFSVNNSPFCGKEGKFVTSRNIRERLDKELVHNVALRVEDTGSPDS-FRVSGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREGYELSVSRP VI +T++G L EP+E + +D ++ +QG +M+++ R G+L
Sbjct: 368 GILIENMRREGYELSVSRPEVILRTVDGVLEEPFETVTIDCQDEHQGSVMEQVGLRKGEL 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K R+RL++ IPSRGLIGFQ +F+TLT G+GL+ H F+ Y P D+G R
Sbjct: 428 TNMTPDGKGRMRLDFMIPSRGLIGFQTDFMTLTSGSGLMYHTFDHYGPHKGG---DIGVR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+I+ +GKA+ +L+ LQ+RGRLFI H VYEGM+IGIH+RDNDL VN +K KQL
Sbjct: 485 KNGVMIANATGKALTNALFNLQERGRLFIGHGVEVYEGMVIGIHNRDNDLTVNALKGKQL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L + +LE A+EFI+DDELVE+TP NIR+RKR+L ENERK+
Sbjct: 545 TNVRASGTDEAQTLSPHLNYSLEQALEFIDDDELVEVTPLNIRIRKRYLTENERKR 600
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + GG + + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLEQSGTLETRGGNEERVMDSNDIEKERGITILAKNTAISWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV I
Sbjct: 69 YHINIVDTPGHADFGGEVERVLSMADSVLLLVDAQEGPMPQTRFVTQKAFAQGLKPIVVI 128
Query: 176 NKIDK 180
NKIDK
Sbjct: 129 NKIDK 133
>gi|406903183|gb|EKD45344.1| hypothetical protein ACD_69C00335G0002 [uncultured bacterium]
Length = 628
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/599 (55%), Positives = 440/599 (73%), Gaps = 8/599 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNI---NARIMDSNEIEKERGITIFSKNCSIEY 982
AIIAHVDHGKTTL+D LLRQSGT ++ + N +MDSNE+E+ERGITI +KN +IE+
Sbjct: 29 AIIAHVDHGKTTLVDQLLRQSGTLKQKLGMLQGNDLVMDSNELERERGITILAKNTAIEW 88
Query: 983 NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
NG +INI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G PIV
Sbjct: 89 NGYKINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLNPIV 148
Query: 1043 VVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIP 1102
VVNK+DR NARP+WV+D FDLFDKL AT++QLDFP+IYTSA G+A N + +M
Sbjct: 149 VVNKVDRPNARPDWVIDRIFDLFDKLGATDKQLDFPIIYTSATKGFATFNWQEPTSDMNL 208
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
LF+ I+ VP + + N PLQ+QI SL+YSSY+G IGIGRI G+++ VV+++ +
Sbjct: 209 LFQMIVDRVPPPEVDPNAPLQMQITSLDYSSYVGTIGIGRIKHGKMRKNMPVVVIDR-EG 267
Query: 1163 KPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDE 1222
K +I QI F GL R ++ A +GDIV ITG+E++ I T+CDP N LP L IDE
Sbjct: 268 KTRSGRILQILGFLGLKRYEIDAADAGDIVAITGVEDLKISDTLCDPEAVNALPPLTIDE 327
Query: 1223 PTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGE 1282
PT+++ F VN SP AGREGKF+T+RQ++ RL E+ +N+ LRV + ++VSGRGE
Sbjct: 328 PTISMTFEVNTSPFAGREGKFLTSRQLRERLYRELLHNVALRVEDTDTPEK-FKVSGRGE 386
Query: 1283 LHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRG 1342
LHL ILIE MRREGYEL+VS+P+VI+K ++G+ EPYE L DIEE +QG +M+ L R
Sbjct: 387 LHLGILIETMRREGYELAVSQPQVIYKIIDGKKCEPYEFLIADIEEKHQGSVMESLGSRK 446
Query: 1343 GDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
+LKN++ + RVRLEY IP+RGL+GFQ EF+ T G G++ HVF+ Y D
Sbjct: 447 AELKNMQSDGLGRVRLEYIIPTRGLMGFQTEFMMSTSGGGILHHVFDHYGIVKTG---DF 503
Query: 1403 GKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKE 1462
KR GVLI+ GK+ ++L+ LQ+R +L I VYEGMI+GI+SR +D++VNP KE
Sbjct: 504 AKRPRGVLIANSKGKSTGFALFNLQERAQLLIGPQIEVYEGMIVGINSRIDDIVVNPTKE 563
Query: 1463 KQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K LTN+R+SG+DE + L P++++LE A+EFI DDELVEITP +RLRK+ LK +RK+
Sbjct: 564 KHLTNMRASGTDENVILTPPVQMSLERALEFIEDDELVEITPTQMRLRKKKLKATDRKR 622
Score = 63.5 bits (153), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQ-----------------HIGAYNVV-- 112
+ I+ HVDHGKT+L+D + + + + G+ Q I A N
Sbjct: 28 IAIIAHVDHGKTTLVDQLLRQSGTLKQKLGMLQGNDLVMDSNELERERGITILAKNTAIE 87
Query: 113 TNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLI 172
N I +DTPGH F R + D V+L+V A DG MPQTR A G+ I
Sbjct: 88 WNGYKINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAQGLNPI 147
Query: 173 VAINKIDKLDINLDRI 188
V +NK+D+ + D +
Sbjct: 148 VVVNKVDRPNARPDWV 163
>gi|387770882|ref|ZP_10127055.1| GTP-binding protein TypA [Pasteurella bettyae CCUG 2042]
gi|386903303|gb|EIJ68119.1| GTP-binding protein TypA [Pasteurella bettyae CCUG 2042]
Length = 615
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/592 (56%), Positives = 436/592 (73%), Gaps = 6/592 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGT + + + R+MDSN++EKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLDSTRGDSDERVMDSNDLEKERGITILAKNTAINWND 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+
Sbjct: 73 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVVI 132
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR RP+WVVD FDLF L AT+EQLDFP++Y SAL G A + +M PLF
Sbjct: 133 NKVDRPGTRPDWVVDQVFDLFVNLGATDEQLDFPIVYASALMGVAGPDHDQLAEDMTPLF 192
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+++V N P Q+QI L+Y++Y+G IGIGRI G +K Q V I++ K
Sbjct: 193 EAIVEHVAPPAVELNAPFQMQISQLDYNNYVGVIGIGRIKRGTVKPNQSVTIIDSF-GKT 251
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
KI Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L++DEPT
Sbjct: 252 RNGKIGQVLGHLGLQRYEEDLAQAGDIVAITGLGELNISDTICDINAVEALPALSVDEPT 311
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP G+EGKF+T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 312 VTMFFCVNTSPFCGQEGKFVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 370
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VIFK NG EP+E + +DIEE +QG +M+ L R G+
Sbjct: 371 LSVLIENMRREGYELAVSRPKVIFKEENGHKQEPFEQVTIDIEEQHQGAVMEALGIRKGE 430
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+K++ + K R RLEY IP+RGLIGF+NEF+T+T GTGL+ F Y + ++G+
Sbjct: 431 VKDMSPDGKGRTRLEYIIPARGLIGFRNEFMTMTSGTGLLYSSFSHYD---DVKPGEIGQ 487
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+AY+LW LQ+RG+L H VYEG IIGIH+R NDL VN ++ K+
Sbjct: 488 RKNGVLISNATGKALAYALWGLQERGKLMAEHGQEVYEGQIIGIHARSNDLTVNCLQGKK 547
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKE 1516
LTN+R+SG D+AIQL +PIK+TLE AIEFI+DDELVE+TP++IR+RK+ L E
Sbjct: 548 LTNMRASGKDDAIQLTTPIKLTLEQAIEFIDDDELVEVTPQSIRIRKKLLTE 599
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 36/251 (14%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D ++++ + S G + + N + IT L
Sbjct: 12 IAIIAHVDHGKTTLVDKLLQQSGTLDSTRGDSDERVMDSNDLEKERGITILAKNTAINWN 71
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A G+ IV
Sbjct: 72 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHGLKPIVV 131
Query: 175 INKID----KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG---INKLLENIS 227
INK+D + D +D++ ++ E+ P + SA GV ++L E+++
Sbjct: 132 INKVDRPGTRPDWVVDQVFDLFVNLGATDEQLD--FPIVYASALMGVAGPDHDQLAEDMT 189
Query: 228 -LQAEILELKAP----VTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYG 282
L I+E AP + P + I + + G + I+ GT++ + V S+G
Sbjct: 190 PLFEAIVEHVAPPAVELNAPFQMQISQLDYNNYVGVIGIGRIKRGTVKPNQSVTIIDSFG 249
Query: 283 RIRSMLNENGK 293
+ R NGK
Sbjct: 250 KTR-----NGK 255
>gi|290473307|ref|YP_003466173.1| GTP-binding elongation factor family protein with P-loop containing
NTP hydrolase domain [Xenorhabdus bovienii SS-2004]
gi|289172606|emb|CBJ79375.1| GTP-binding elongation factor family protein with P-loop containing
NTP hydrolase domain [Xenorhabdus bovienii SS-2004]
Length = 607
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/596 (54%), Positives = 440/596 (73%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I++N
Sbjct: 10 AIIAHVDHGKTTLVDKLLQQSGTFGERAATTERVMDSNDLEKERGITILAKNTAIKWNDY 69
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLLL+DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 70 RINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAHGLKPIVVIN 129
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL G A +M PL++
Sbjct: 130 KVDRPGARPDWVVDQVFDLFVNLGATDEQLDFPIVYASALMGIAGNEHTDMAEDMTPLYQ 189
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V K + + P Q+QI L+Y++Y+G IGIG I G +K Q + I++ + K
Sbjct: 190 AIVDHVEPPKVDLDGPFQMQISQLDYNNYVGVIGIGSIKRGTVKPNQTITIIDS-EGKTR 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GLDR+ +A +GDI+ ITG+ E+ I T+CD S LP L +DEPT+
Sbjct: 249 NGKVGKVFSHLGLDRIESAQAEAGDIIAITGLGELSISDTLCDTSAVEALPALAVDEPTV 308
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP GREGK++T+RQI +RL E+ +N+ LRV + + D+ + V+GRGELHL
Sbjct: 309 SMYFCVNTSPFCGREGKYVTSRQILDRLRKELVHNVALRVEETEDPDA-FRVAGRGELHL 367
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+E+ VSRP+VI++ ++G EP+E + +DIEE +QG +MQ L R G++
Sbjct: 368 SVLIENMRREGFEMGVSRPKVIYREIDGRKQEPFEQVTLDIEEQHQGDVMQALGERKGEM 427
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVRL+Y IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+R
Sbjct: 428 RDMLPDGKGRVRLDYSIPSRGLIGFRTEFMTMTSGTGLLYATFSHYDDI---RPGEIGRR 484
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+IS GKAVAY+L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 485 QNGVMISNGQGKAVAYALYSLQDRGKLFLGHGTEVYEGQIIGIHSRSNDLTVNCLTGKKL 544
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +K TLE A+EFI+DDELVE+TP++IRLRKR L EN+R++
Sbjct: 545 TNVRASGTDEATTLSPYLKKTLEQALEFIDDDELVEVTPQSIRLRKRHLTENDRRR 600
Score = 70.5 bits (171), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 9 IAIIAHVDHGKTTLVDKLLQQSGTFGERAATTERVMDSNDLEKERGITILAKNTAIKWND 68
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 69 YRINIVDTPGHADFGGEVERVMSMVDSVLLLVDAMDGPMPQTRFVTQKAFAHGLKPIVVI 128
Query: 176 NKIDK 180
NK+D+
Sbjct: 129 NKVDR 133
>gi|157373111|ref|YP_001481100.1| GTP-binding protein TypA [Serratia proteamaculans 568]
gi|157324875|gb|ABV43972.1| GTP-binding protein TypA [Serratia proteamaculans 568]
Length = 607
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/596 (54%), Positives = 445/596 (74%), Gaps = 5/596 (0%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF + R+MDSN++EKERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA++GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP+IY SAL G A + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIIYASALMGIAGTDHNEMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V + P Q+QI L+Y++Y+G IGIGRI G++K Q + I++ + K
Sbjct: 189 AIVDHVSAPQVELEAPFQMQISQLDYNNYVGVIGIGRIKRGKVKPNQQITIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ ++ GL+R+ A +GDI+ ITG+ E+ I TICD + LP L++DEPT+
Sbjct: 248 NGKVAKVLTHMGLERIEAPIAEAGDIIAITGLGELNISDTICDVNAVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP G+EGK++T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 TMYFNVNTSPFCGKEGKYVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VI + ++G + EP+EN+ +DIEE +QG +MQ + R GD+
Sbjct: 367 SVLIENMRREGFELAVSRPKVINRKIDGRMQEPFENVTLDIEEQHQGSVMQAMGERKGDV 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+RL+Y IP+RGLIGF+ EF+T+T GTGL+ F Y + + ++G+R
Sbjct: 427 KDMIPDGKGRIRLDYLIPARGLIGFRTEFMTMTSGTGLLYSTFSHYD---DVRQGEIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L+ IK++LE A+EFI+DDELVE+TP ++R+RKR L EN+RK+
Sbjct: 544 TNMRASGTDEATTLVPAIKMSLEQALEFIDDDELVEVTPTSVRIRKRHLTENDRKR 599
Score = 69.3 bits (168), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F E T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFGERVEATERVMDSNDLEKERGITILAKNTAINWKD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A +G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAMDGPMPQTRFVTKKAFANGLKPIVVI 127
Query: 176 NKIDK 180
NK+D+
Sbjct: 128 NKVDR 132
>gi|309751467|gb|ADO81451.1| Ribosome binding GTPase BipA [Haemophilus influenzae R2866]
Length = 616
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/597 (56%), Positives = 447/597 (74%), Gaps = 6/597 (1%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQ-NINARIMDSNEIEKERGITIFSKNCSIEYNG 984
AIIAHVDHGKTTL+D LL+QSGTF + +I+ R+MDSN++EKERGITI +KN +I +N
Sbjct: 14 AIIAHVDHGKTTLVDKLLQQSGTFESARGDIDERVMDSNDLEKERGITILAKNTAINWND 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGHADFGGEVER+LSMVD+VLL++DA +GPMPQTRFVT+KA KPIVV+
Sbjct: 74 YRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHSLKPIVVI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK+DR ARP+WVVD FDLF L A++EQLDFP+IY SAL+G A + +M PLF
Sbjct: 134 NKVDRPGARPDWVVDQVFDLFVNLGASDEQLDFPIIYASALNGVAGLEHEDLAEDMTPLF 193
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
EAI+K+V K + P Q+QI L+Y++Y+G IGIGRI G IK Q V I+N + K
Sbjct: 194 EAIVKHVEPPKVELDAPFQMQISQLDYNNYVGVIGIGRIKRGSIKPNQPVTIINS-EGKT 252
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
+ +I Q+ GL R + A +GDIV ITG+ E+ I TICD + LP L +DEPT
Sbjct: 253 RQGRIGQVLGHLGLQRYEEDVAYAGDIVAITGLGELNISDTICDINTVEALPSLTVDEPT 312
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+T+ F VN SP AG+EGK++T+RQI RL+ E+ +N+ LRV + + D + VSGRGELH
Sbjct: 313 VTMFFCVNTSPFAGQEGKYVTSRQILERLNKELVHNVALRVEETPNPDE-FRVSGRGELH 371
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L++LIENMRREGYEL+VSRP+VI++ ++G+ EPYE + +D+EE +QG +M+ L R G+
Sbjct: 372 LSVLIENMRREGYELAVSRPKVIYRDIDGKKQEPYEQVTIDVEEQHQGSVMEALGIRKGE 431
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++ + K RVRLEY IPSRGLIGF+ EF+T+T GTGL+ F Y ++G+
Sbjct: 432 VRDMLPDGKGRVRLEYIIPSRGLIGFRGEFMTMTSGTGLLYSSFSHYDEIKGG---EIGQ 488
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R+NGVLIS +GKA+ Y+L+ LQ+RG+L I+ N VYEG IIGIHSR NDL VN ++ K+
Sbjct: 489 RKNGVLISNATGKALGYALFGLQERGKLMIDANVEVYEGQIIGIHSRSNDLTVNCLQGKK 548
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTN+R+SG D+AI L +P+K +LE AIEFI+DDELVE+TP++IR+RK+ L EN+RK+
Sbjct: 549 LTNMRASGKDDAIVLTTPVKFSLEQAIEFIDDDELVEVTPESIRIRKKLLTENDRKR 605
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 60/126 (47%), Gaps = 17/126 (13%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEA-GGITQHIGAYNVVTNHGSITFL--------- 121
+ I+ HVDHGKT+L+D + + + F A G I + + N + IT L
Sbjct: 13 IAIIAHVDHGKTTLVDKLLQQSGTFESARGDIDERVMDSNDLEKERGITILAKNTAINWN 72
Query: 122 -------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
DTPGH F R + D V+LVV A DG MPQTR A + IV
Sbjct: 73 DYRINIVDTPGHADFGGEVERVLSMVDSVLLVVDAFDGPMPQTRFVTQKAFAHSLKPIVV 132
Query: 175 INKIDK 180
INK+D+
Sbjct: 133 INKVDR 138
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.139 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,793,877,796
Number of Sequences: 23463169
Number of extensions: 999376524
Number of successful extensions: 2971522
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 41313
Number of HSP's successfully gapped in prelim test: 21592
Number of HSP's that attempted gapping in prelim test: 2716026
Number of HSP's gapped (non-prelim): 154562
length of query: 1527
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1371
effective length of database: 8,698,941,003
effective search space: 11926248115113
effective search space used: 11926248115113
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 84 (37.0 bits)