Your job contains 1 sequence.
>psy1758
MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN
ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF
LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK
LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT
TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP
SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN
KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI
IIGFNVRADASTRKLAQINNINIRYHNIIYNIIKEIKSEITNLIPLEKKENLLGLAEIRQ
VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECE
RLSRIENQIQRDISEIIAFDIQNPIINIITITEVKITLDYSYAKIFFTTFNKDISIKNIL
DNLSKAKNYIRFKLSKKLHIHTLPILNFFYDNSIENAMMISKLIDGIKYCMQFHIKKNKN
IIHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYL
SEADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSA
LKYKGIPLYKYARSGITIKRKLRYIKIYKITIIDYTIPYLTLRIHCSKGTYIRVLSEDIG
KMLGCGAHLKYLRRIGIDKLTLDKCLNIDTIIKYSEYERISSLIPIDILLSSFGIIYLSD
LLSKRFLHGQNLFLSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIM
DSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVE
GPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVI
YTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGI
GRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEI
CIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNN
IGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYE
NLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRG
TGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLV
YEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELV
EITPKNIRLRKRFLKENERKKKLHKFT
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1758
(1527 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q603F4 - symbol:typA "GTP-binding protein TypA"... 1794 5.8e-185 1
TIGR_CMR|SO_4408 - symbol:SO_4408 "virulence regulator Bi... 1762 1.4e-181 1
TIGR_CMR|VC_2744 - symbol:VC_2744 "GTP-binding protein Ty... 1749 3.4e-180 1
UNIPROTKB|P32132 - symbol:typA "protein possibly involved... 1740 3.0e-179 1
TIGR_CMR|CBU_0884 - symbol:CBU_0884 "virulence regulator ... 1726 9.3e-178 1
UNIPROTKB|Q489A8 - symbol:typA "GTP-binding protein TypA"... 1697 1.1e-174 1
TIGR_CMR|CPS_0606 - symbol:CPS_0606 "GTP-binding protein ... 1697 1.1e-174 1
UNIPROTKB|Q88AM8 - symbol:typA "GTP-binding protein TypA"... 1679 8.9e-173 1
UNIPROTKB|Q74FV3 - symbol:typA "Translation-regulating me... 1598 3.4e-164 1
TIGR_CMR|GSU_0500 - symbol:GSU_0500 "GTP-binding protein ... 1598 3.4e-164 1
TIGR_CMR|CJE_0038 - symbol:CJE_0038 "GTP-binding protein ... 1574 1.2e-161 1
TIGR_CMR|BA_4166 - symbol:BA_4166 "GTP-binding protein Ty... 1548 6.8e-159 1
UNIPROTKB|Q2GGD5 - symbol:typA "GTP-binding protein TypA"... 1524 2.4e-156 1
TIGR_CMR|ECH_0693 - symbol:ECH_0693 "GTP-binding protein ... 1524 2.4e-156 1
TIGR_CMR|SO_1204 - symbol:SO_1204 "translation initiation... 1522 3.8e-156 1
UNIPROTKB|P0A705 - symbol:infB species:83333 "Escherichia... 1502 5.1e-154 1
UNIPROTKB|Q9KU80 - symbol:infB "Translation initiation fa... 1499 1.1e-153 1
TIGR_CMR|VC_0643 - symbol:VC_0643 "initiation factor IF-2... 1499 1.1e-153 1
UNIPROTKB|Q721A3 - symbol:typA "GTP-binding protein TypA"... 1494 3.6e-153 1
UNIPROTKB|Q2GKP7 - symbol:typA "GTP-binding protein TypA"... 1492 5.8e-153 1
TIGR_CMR|APH_0451 - symbol:APH_0451 "GTP-binding protein ... 1492 5.8e-153 1
TIGR_CMR|CPS_2203 - symbol:CPS_2203 "translation initiati... 1488 1.5e-152 1
UNIPROTKB|Q0C599 - symbol:typA "GTP-binding protein TypA"... 1486 2.5e-152 1
TIGR_CMR|CBU_1432 - symbol:CBU_1432 "translation initiati... 1479 1.4e-151 1
TIGR_CMR|DET_1298 - symbol:DET_1298 "GTP-binding protein ... 1469 1.6e-150 1
UNIPROTKB|Q5LRU3 - symbol:typA "GTP-binding protein TypA"... 1459 1.8e-149 1
TIGR_CMR|SPO_2031 - symbol:SPO_2031 "GTP-binding protein ... 1459 1.8e-149 1
UNIPROTKB|Q2GD95 - symbol:typA "GTP-binding protein TypA"... 1384 1.6e-141 1
TIGR_CMR|NSE_0673 - symbol:NSE_0673 "GTP-binding protein ... 1384 1.6e-141 1
TIGR_CMR|CHY_1766 - symbol:CHY_1766 "translation initiati... 1338 4.4e-139 2
TAIR|locus:2173169 - symbol:SVR3 "AT5G13650" species:3702... 1343 3.6e-137 1
TIGR_CMR|GSU_1588 - symbol:GSU_1588 "translation initiati... 1334 3.2e-136 1
DICTYBASE|DDB_G0276121 - symbol:DDB_G0276121 "GTP-binding... 1304 1.7e-135 2
TIGR_CMR|SPO_0061 - symbol:SPO_0061 "translation initiati... 1253 1.2e-127 1
TIGR_CMR|BA_3950 - symbol:BA_3950 "translation initiation... 1235 9.9e-126 1
TIGR_CMR|CJE_0131 - symbol:CJE_0131 "translation initiati... 1191 4.6e-121 1
TIGR_CMR|DET_0983 - symbol:DET_0983 "translation initiati... 1171 6.0e-119 1
UNIPROTKB|O06563 - symbol:typA "POSSIBLE GTP-BINDING TRAN... 1043 8.0e-111 2
UNIPROTKB|P65131 - symbol:infB "Translation initiation fa... 1076 7.0e-109 1
TIGR_CMR|ECH_0563 - symbol:ECH_0563 "translation initiati... 1064 1.3e-107 1
GENEDB_PFALCIPARUM|PF07_0062 - symbol:PF07_0062 "GTP-bind... 619 1.0e-105 2
UNIPROTKB|Q8IBU4 - symbol:PF07_0062 "GTP-binding translat... 619 1.0e-105 2
TIGR_CMR|APH_0446 - symbol:APH_0446 "translation initiati... 1041 4.5e-105 1
TAIR|locus:2020427 - symbol:FUG1 "fu-gaeri1" species:3702... 1030 9.0e-104 1
UNIPROTKB|E1BZP9 - symbol:MTIF2 "Translation initiation f... 746 7.1e-98 2
TIGR_CMR|NSE_0522 - symbol:NSE_0522 "translation initiati... 976 1.1e-97 1
ZFIN|ZDB-GENE-030131-1092 - symbol:mtif2 "mitochondrial t... 707 9.0e-96 2
RGD|1303046 - symbol:Mtif2 "mitochondrial translational i... 739 2.0e-95 2
UNIPROTKB|E2R3A4 - symbol:MTIF2 "Uncharacterized protein"... 718 2.9e-95 2
UNIPROTKB|F1SQK6 - symbol:MTIF2 "Translation initiation f... 714 1.4e-93 2
MGI|MGI:1924034 - symbol:Mtif2 "mitochondrial translation... 726 1.7e-93 2
UNIPROTKB|P46198 - symbol:MTIF2 "Translation initiation f... 711 7.9e-93 2
TAIR|locus:2136098 - symbol:AT4G11160 species:3702 "Arabi... 927 2.6e-92 1
UNIPROTKB|P46199 - symbol:MTIF2 "Translation initiation f... 708 5.0e-91 2
CGD|CAL0002630 - symbol:IFM1 species:5476 "Candida albica... 718 2.9e-89 2
FB|FBgn0039588 - symbol:CG12413 species:7227 "Drosophila ... 655 2.3e-84 2
SGD|S000005383 - symbol:IFM1 "Mitochondrial translation i... 626 3.8e-81 2
POMBASE|SPBC1271.15c - symbol:SPBC1271.15c "mitochondrial... 820 9.7e-81 1
UNIPROTKB|J9P9B1 - symbol:MTIF2 "Uncharacterized protein"... 718 1.0e-80 2
ASPGD|ASPL0000014076 - symbol:AN10535 species:162425 "Eme... 791 3.5e-80 3
WB|WBGene00009771 - symbol:F46B6.6 species:6239 "Caenorha... 562 1.2e-67 2
GENEDB_PFALCIPARUM|PFE0830c - symbol:PFE0830c "hypothetic... 518 5.9e-61 2
UNIPROTKB|Q8I3U2 - symbol:PFE0830c "GTP-binding translati... 518 5.9e-61 2
DICTYBASE|DDB_G0275751 - symbol:DDB_G0275751 "translation... 601 5.2e-55 1
UNIPROTKB|P60340 - symbol:truB "tRNA pseudouridine 55 syn... 507 3.2e-47 1
UNIPROTKB|Q9KU78 - symbol:truB "tRNA pseudouridine syntha... 494 7.8e-46 1
TIGR_CMR|VC_0645 - symbol:VC_0645 "tRNA pseudouridine 55 ... 494 7.8e-46 1
TIGR_CMR|CPS_2205 - symbol:CPS_2205 "tRNA pseudouridine s... 481 1.3e-45 2
TIGR_CMR|CBU_1430 - symbol:CBU_1430 "tRNA pseudouridine s... 485 7.1e-45 1
TIGR_CMR|GSU_1591 - symbol:GSU_1591 "tRNA pseudouridine s... 439 5.7e-40 1
TIGR_CMR|DET_0981 - symbol:DET_0981 "tRNA pseudouridine s... 375 3.8e-33 1
TIGR_CMR|BA_0107 - symbol:BA_0107 "translation elongation... 260 5.5e-30 4
UNIPROTKB|Q97QJ3 - symbol:truB "tRNA pseudouridine syntha... 345 6.0e-30 1
TIGR_CMR|CHY_2313 - symbol:CHY_2313 "translation elongati... 234 6.4e-30 3
TIGR_CMR|NSE_0687 - symbol:NSE_0687 "translation elongati... 243 1.2e-29 3
UNIPROTKB|P0A6M8 - symbol:fusA "elongation factor G" spec... 218 1.4e-29 3
TIGR_CMR|ECH_0728 - symbol:ECH_0728 "tRNA pseudouridine s... 340 2.1e-29 1
TIGR_CMR|APH_0769 - symbol:APH_0769 "tRNA pseudouridine s... 335 7.0e-29 1
TIGR_CMR|SPO_3837 - symbol:SPO_3837 "tRNA pseudouridine s... 335 7.0e-29 1
TIGR_CMR|ECH_0961 - symbol:ECH_0961 "translation elongati... 250 1.5e-28 2
TIGR_CMR|CHY_1763 - symbol:CHY_1763 "tRNA pseudouridine s... 327 5.0e-28 1
TIGR_CMR|CPS_4765 - symbol:CPS_4765 "translation elongati... 228 8.6e-28 3
TIGR_CMR|APH_1033 - symbol:APH_1033 "translation elongati... 251 1.3e-27 2
UNIPROTKB|F1NX94 - symbol:GUF1 "Uncharacterized protein" ... 284 5.0e-27 2
TIGR_CMR|CHY_0410 - symbol:CHY_0410 "GTP-binding protein ... 254 8.4e-27 3
TAIR|locus:2199562 - symbol:AT1G21160 "AT1G21160" species... 265 2.3e-26 2
UNIPROTKB|Q9KUZ7 - symbol:fusA1 "Elongation factor G 1" s... 216 2.8e-26 3
TIGR_CMR|VC_0361 - symbol:VC_0361 "elongation factor G" s... 216 2.8e-26 3
UNIPROTKB|P62190 - symbol:truB "tRNA pseudouridine syntha... 309 4.1e-26 1
UNIPROTKB|H7C213 - symbol:MTIF2 "Translation initiation f... 308 5.3e-26 1
TIGR_CMR|GSU_2529 - symbol:GSU_2529 "translation elongati... 232 5.5e-26 3
UNIPROTKB|Q2GD00 - symbol:lepA "Elongation factor 4" spec... 247 5.6e-26 2
TIGR_CMR|NSE_0771 - symbol:NSE_0771 "GTP-binding protein ... 247 5.6e-26 2
CGD|CAL0005338 - symbol:orf19.5483 species:5476 "Candida ... 249 8.2e-26 3
UNIPROTKB|Q2GGA6 - symbol:lepA "Elongation factor 4" spec... 236 8.3e-26 2
TIGR_CMR|ECH_0724 - symbol:ECH_0724 "GTP-binding protein ... 236 8.3e-26 2
SGD|S000004280 - symbol:GUF1 "Mitochondrial matrix GTPase... 280 1.1e-25 2
UNIPROTKB|P0A556 - symbol:fusA "Elongation factor G" spec... 223 1.4e-25 3
TAIR|locus:2026212 - symbol:SCO1 "SNOWY COTYLEDON 1" spec... 240 2.8e-25 2
TIGR_CMR|DET_0472 - symbol:DET_0472 "translation elongati... 243 3.3e-25 3
WARNING: Descriptions of 481 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q603F4 [details] [associations]
symbol:typA "GTP-binding protein TypA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006298
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0005622 EMBL:AE017282
GenomeReviews:AE017282_GR Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HOGENOM:HOG000282351 KO:K06207 OMA:GWVRMEF PANTHER:PTHR23115:SF14
TIGRFAMs:TIGR01394 RefSeq:YP_115246.1 ProteinModelPortal:Q603F4
GeneID:3104330 KEGG:mca:MCA2852 PATRIC:22609580 Uniprot:Q603F4
Length = 606
Score = 1794 (636.6 bits), Expect = 5.8e-185, P = 5.8e-185
Identities = 348/596 (58%), Positives = 454/596 (76%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF ++ + R+MDSN++EKERGITI +KN +I++
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFAAHERVGERVMDSNDLEKERGITILAKNTAIKWRDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA +G PIV++N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAMGLHPIVLIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR AR WV+D TFDLFD+L ATE QLDFPVIY SAL+GYA + +G + PLFE
Sbjct: 129 KIDRPGARAAWVLDQTFDLFDRLGATEAQLDFPVIYCSALNGYAGLSPDISEGTLEPLFE 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +V +++ P Q+Q+ SL+Y+SY+G IGIGRI G +K V ++ D + +
Sbjct: 189 AIVNHVSPPDVDTDGPFQMQVSSLDYNSYVGVIGIGRITRGTVKRNTPVTLIKR-DGRQS 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
A+I Q+ F GL+R+ EA +GDI+ TGIE + I T+C LP L +DEPT+
Sbjct: 248 AARILQVLAFHGLERIEREEANAGDIIAFTGIEGLEISDTLCAVGFAEQLPPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VNNSP AGREGKF+T+RQI++RL+ E+ +N+ LRV D + VSGRGELHL
Sbjct: 308 SMTFQVNNSPFAGREGKFLTSRQIRDRLNRELIHNVALRVEDTADPDK-FTVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI + ++GE EPYE + +++EE +QG +M+KL R GDL
Sbjct: 367 SILIENMRREGYELAVSRPEVIIREIDGEPCEPYEFVTIEVEETHQGAVMEKLGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+N+ + + RVRLEY IPSRGLIGFQ EF+T T GTGL+ HVF+ Y P + +G+R
Sbjct: 427 RNMVPDGQGRVRLEYLIPSRGLIGFQTEFLTTTSGTGLLYHVFDHYGPIKRGA---IGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NG LIS +GKA+A+SL+ LQ+RGRLF+ H D VYEGM++G+H+R NDL+VNP K KQL
Sbjct: 484 TNGALISNTTGKALAFSLFNLQERGRLFVEHGDEVYEGMVVGVHTRGNDLVVNPTKAKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TNIR++GSDE I L IK TLE AIEFI+DDELVE+TP++IR+RK+ L+E+ERKK
Sbjct: 544 TNIRAAGSDENILLTPAIKFTLEQAIEFIDDDELVEVTPQSIRIRKKLLQEHERKK 599
Score = 144 (55.7 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 43/125 (34%), Positives = 60/125 (48%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F+ + + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFAAHERVGERVMDSNDLEKERGITILAKNTAIKWRD 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTQKAFAMGLHPIVLI 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
Score = 39 (18.8 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 11/53 (20%), Positives = 25/53 (47%)
Query: 186 DRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAP 238
DR+ ++LI + E ++S + + ++ L+EN+ + L + P
Sbjct: 333 DRLNRELIHNVALRVEDTADPDKFTVSGRGELHLSILIENMRREGYELAVSRP 385
>TIGR_CMR|SO_4408 [details] [associations]
symbol:SO_4408 "virulence regulator BipA" species:211586
"Shewanella oneidensis MR-1" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HSSP:P13551 HOGENOM:HOG000282351 KO:K06207
OMA:GWVRMEF PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394
RefSeq:NP_719931.1 ProteinModelPortal:Q8E978 GeneID:1172007
KEGG:son:SO_4408 PATRIC:23528471 ProtClustDB:CLSK907633
Uniprot:Q8E978
Length = 603
Score = 1762 (625.3 bits), Expect = 1.4e-181, P = 1.4e-181
Identities = 342/596 (57%), Positives = 449/596 (75%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER+LSMVD+VLLL+DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDFP++Y SAL+G+A + +M PLF+
Sbjct: 129 KIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDPDVVSEDMTPLFQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I++ V +++ P Q+QI L+Y+SY+G IG+GRI G IK+ Q V ++ G D K
Sbjct: 189 TIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVI-GADGKVR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
K+ Q+ + GL+R V+ A +GDIV ITG+ E+ I T+C +P L++DEPTL
Sbjct: 248 NGKMGQVLGYMGLERTEVDVANAGDIVAITGLGELKISDTVCAAGNVEAMPPLSVDEPTL 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGK++T+R I RL E+ +N+ LRV + D + VSGRGELHL
Sbjct: 308 TMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSPDR-FAVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREGYEL+VSRP VI KT++GEL EP+E L VD+EE +QG +++KL R ++
Sbjct: 367 SILIENMRREGYELAVSRPEVILKTIDGELCEPFETLTVDVEEEHQGTVIEKLGIRKAEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K+++++ K RVR+++ IPSRGLIGFQ EF+T T GTGLI H F+ Y P +K D+G+R
Sbjct: 427 KDMQLDGKGRVRVDFVIPSRGLIGFQTEFLTATSGTGLIYHSFDHYGP--HKGG-DIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS +GKA+ ++L+ LQDRGRLFI H VYEG ++GIH+R NDL VN +K KQL
Sbjct: 484 ANGVLISNATGKALTFALFGLQDRGRLFIGHAAEVYEGQVVGIHARSNDLTVNCLKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA L +PI +TLE A+EFI+DDELVE+TPK+IR+RK+ L EN+RK+
Sbjct: 544 TNMRASGTDEAQVLTTPITLTLEQALEFIDDDELVEVTPKSIRVRKKHLTENDRKR 599
Score = 153 (58.9 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 72/243 (29%), Positives = 107/243 (44%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + G T+ + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLSQSGTLATRGEATERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKAFAQGLKPIVVI 127
Query: 176 NKIDKLDINLDR-IKQ--DLISEQVIPEEYGGASPFISISAKTGVGI---NKLLENIS-L 228
NKID+ D I Q DL +E P + SA G + + E+++ L
Sbjct: 128 NKIDRPGARPDWVIDQVFDLFDNLGATDEQLDF-PIVYASALNGFATLDPDVVSEDMTPL 186
Query: 229 QAEILELKAPVTTPAKGVI-IE-SRLDKGK--GPVATVLIQSGTLRCSDIV-VAGASYGR 283
I+E + A G ++ S+LD G + I G+++ + V V GA G+
Sbjct: 187 FQTIVEKVSSPDADADGPFQMQISQLDYNSYVGVIGVGRINRGSIKTNQQVSVIGAD-GK 245
Query: 284 IRS 286
+R+
Sbjct: 246 VRN 248
Score = 40 (19.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 7/40 (17%), Positives = 22/40 (55%)
Query: 371 IKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESD 410
+ T + +E + +N+ ++++ +++HN + E+D
Sbjct: 313 VNTSPFAGKEGKYVTSRNI-LERLQQELVHNVALRVEETD 351
>TIGR_CMR|VC_2744 [details] [associations]
symbol:VC_2744 "GTP-binding protein TypA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0005622 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HSSP:P32324 KO:K06207 OMA:GWVRMEF
PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394 PIR:H82039
RefSeq:NP_232370.1 ProteinModelPortal:Q9KNJ4 DNASU:2614907
GeneID:2614907 KEGG:vch:VC2744 PATRIC:20084506
ProtClustDB:CLSK874909 Uniprot:Q9KNJ4
Length = 609
Score = 1749 (620.7 bits), Expect = 3.4e-180, P = 3.4e-180
Identities = 341/596 (57%), Positives = 450/596 (75%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT ++ R+MDSN+IEKERGITI +KN +I +N
Sbjct: 13 AIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITILAKNTAINWNDY 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+SMVD+VLL++DAV+GPMPQTRFVT+KA G KPIVV+N
Sbjct: 73 RINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKAFAHGLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WV+D FDLFD L AT+EQLDF V+Y SAL+G+A NM PLF+
Sbjct: 133 KIDRPGARPDWVMDQVFDLFDNLGATDEQLDFQVVYASALNGWATLVEGETGENMEPLFQ 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ V + + + PLQ+QI L+YSSY+G IG+GRI G++K Q V ++ G D K
Sbjct: 193 AIVDNVAAPQVDLDGPLQMQISQLDYSSYVGVIGVGRIKRGKVKPNQQVTVI-GADGKKR 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
KI + + GL R ++A +GDIV +TG+ E+ I TICD + LP L++DEPT+
Sbjct: 252 NGKIGTVLGYLGLQRSETDQATAGDIVAVTGLGELKISDTICDVNALEALPPLSVDEPTV 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
T+ F VN SP AG+EGKF+T+R I RL+ E+ +N+ LRV Q + D + VSGRGELHL
Sbjct: 312 TMTFQVNTSPFAGKEGKFVTSRNILERLEKELVHNVALRVEQTEDPDK-FRVSGRGELHL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+EL+VSRP VI K +G+L EP+E + +D++E +QG IM+K+ R G+L
Sbjct: 371 SILIENMRREGFELAVSRPEVILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGEL 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K++ + K R+R+++ +PSRGLIGFQ EF+TLT G+GL+ H F+ Y P +K +G+R
Sbjct: 431 KDMSPDGKGRIRMDFVMPSRGLIGFQTEFMTLTSGSGLLYHSFDHYGP--HKGGV-IGQR 487
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVL+S +GKA+ +L+ LQ+RGR+FI H VYEGM+IGIHSRDNDL VNP+K KQL
Sbjct: 488 VNGVLVSNGTGKALTNALFNLQERGRMFIGHGVEVYEGMVIGIHSRDNDLTVNPLKGKQL 547
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+D+A L PI ++LE A+EFI+DDELVE+TP +IR+RKRFL EN+RK+
Sbjct: 548 TNVRASGTDDAQVLTPPIIMSLEQALEFIDDDELVEVTPVSIRIRKRFLTENDRKR 603
Score = 155 (59.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 44/136 (32%), Positives = 63/136 (46%)
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+T + + + I+ HVDHGKT+L+D + + + G + + + N + IT
Sbjct: 1 MTTPQIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTLESRGDVEERVMDSNDIEKERGITI 60
Query: 121 L----------------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHA 164
L DTPGH F R + D V+L+V A DG MPQTR A
Sbjct: 61 LAKNTAINWNDYRINIVDTPGHADFGGEVERIMSMVDSVLLIVDAVDGPMPQTRFVTQKA 120
Query: 165 KISGVPLIVAINKIDK 180
G+ IV INKID+
Sbjct: 121 FAHGLKPIVVINKIDR 136
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 25/110 (22%), Positives = 49/110 (44%)
Query: 185 LDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAK 244
L+R++++L+ + E +S + + ++ L+EN ++ E EL V+ P
Sbjct: 336 LERLEKELVHNVALRVEQTEDPDKFRVSGRGELHLSILIEN--MRREGFELA--VSRPE- 390
Query: 245 GVIIESRLDKGKGPVATVLIQSGTLRCSDIVVA-GASYGRIRSMLNENGK 293
VI++ + P TV I I+ G G ++ M + +GK
Sbjct: 391 -VILKHEDGQLMEPFETVTIDVQEEHQGGIMEKIGMRKGELKDM-SPDGK 438
>UNIPROTKB|P32132 [details] [associations]
symbol:typA "protein possibly involved in ribosome
structure or function" species:83333 "Escherichia coli K-12"
[GO:0005622 "intracellular" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0009409 "response to cold" evidence=IMP]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IGI]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006412
GO:GO:0009409 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622 EMBL:L19201
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 EMBL:AJ224871
PIR:S40816 RefSeq:YP_026274.1 RefSeq:YP_491579.1
ProteinModelPortal:P32132 SMR:P32132 DIP:DIP-11058N IntAct:P32132
PhosSite:P010436 PhosSite:P010438 PaxDb:P32132 PRIDE:P32132
EnsemblBacteria:EBESCT00000002327 EnsemblBacteria:EBESCT00000014970
GeneID:12933637 GeneID:948369 KEGG:ecj:Y75_p3315 KEGG:eco:b3871
PATRIC:32123245 EchoBASE:EB1783 EcoGene:EG11837 eggNOG:COG1217
HOGENOM:HOG000282351 KO:K06207 OMA:GWVRMEF ProtClustDB:PRK10218
BioCyc:EcoCyc:EG11837-MONOMER BioCyc:ECOL316407:JW5571-MONOMER
Genevestigator:P32132 PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394
Uniprot:P32132
Length = 607
Score = 1740 (617.6 bits), Expect = 3.0e-179, P = 3.0e-179
Identities = 335/596 (56%), Positives = 452/596 (75%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTF R+MDSN++EKERGITI +KN +I++N
Sbjct: 9 AIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWNDY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVER++SMVD+VLL++DA +GPMPQTRFVT+KA G KPIVV+N
Sbjct: 69 RINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WVVD FDLF L AT+EQLDFP++Y SAL+G A + + +M PL++
Sbjct: 129 KVDRPGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAGLDHEDMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI+ +VP + + P Q+QI L+Y+SY+G IGIGRI G++K Q V I++ + K
Sbjct: 189 AIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDS-EGKTR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ GL+R+ + A +GDIV ITG+ E+ I T+CD LP L++DEPT+
Sbjct: 248 NAKVGKVLGHLGLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN SP G+EGKF+T+RQI +RL+ E+ +N+ LRV + + D+ + VSGRGELHL
Sbjct: 308 SMFFCVNTSPFCGKEGKFVTSRQILDRLNKELVHNVALRVEETEDADA-FRVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIENMRREG+EL+VSRP+VIF+ ++G EPYEN+ +D+EE +QG +MQ L R GDL
Sbjct: 367 SVLIENMRREGFELAVSRPKVIFREIDGRKQEPYENVTLDVEEQHQGSVMQALGERKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
KN+ + K RVRL+Y IPSRGLIGF++EF+T+T GTGL+ F Y + ++G+R
Sbjct: 427 KNMNPDGKGRVRLDYVIPSRGLIGFRSEFMTMTSGTGLLYSTFSHYD---DVRPGEVGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLIS GKAVA++L+ LQDRG+LF+ H VYEG IIGIHSR NDL VN + K+L
Sbjct: 484 QNGVLISNGQGKAVAFALFGLQDRGKLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SG+DEA+ L+ PI++TLE A+EFI+DDELVE+TP +IR+RKR L EN+R++
Sbjct: 544 TNMRASGTDEAVVLVPPIRMTLEQALEFIDDDELVEVTPTSIRIRKRHLTENDRRR 599
Score = 150 (57.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 67/243 (27%), Positives = 107/243 (44%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + F + + N + IT L
Sbjct: 8 IAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDLEKERGITILAKNTAIKWND 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+LVV A DG MPQTR A G+ IV I
Sbjct: 68 YRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVI 127
Query: 176 NKIDKL----DINLDRIKQDLISEQVIPEEYGGASPFISISAKTGV-GINK--LLENIS- 227
NK+D+ D +D++ ++ E+ P + SA G+ G++ + E+++
Sbjct: 128 NKVDRPGARPDWVVDQVFDLFVNLDATDEQLD--FPIVYASALNGIAGLDHEDMAEDMTP 185
Query: 228 -LQAEILELKAP-VTTPAKGVIIESRLDKGK--GPVATVLIQSGTLRCSDIVVAGASYGR 283
QA + + AP V + S+LD G + I+ G ++ + V S G+
Sbjct: 186 LYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYVGVIGIGRIKRGKVKPNQQVTIIDSEGK 245
Query: 284 IRS 286
R+
Sbjct: 246 TRN 248
>TIGR_CMR|CBU_0884 [details] [associations]
symbol:CBU_0884 "virulence regulator BipA" species:227377
"Coxiella burnetii RSA 493" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0009405 "pathogenesis" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HSSP:P32324 HOGENOM:HOG000282351 KO:K06207
OMA:GWVRMEF PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394
RefSeq:NP_819901.1 ProteinModelPortal:Q83D58 PRIDE:Q83D58
GeneID:1208777 KEGG:cbu:CBU_0884 PATRIC:17930467
ProtClustDB:CLSK914386 BioCyc:CBUR227377:GJ7S-877-MONOMER
Uniprot:Q83D58
Length = 602
Score = 1726 (612.6 bits), Expect = 9.3e-178, P = 9.3e-178
Identities = 356/597 (59%), Positives = 433/597 (72%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGT + R+MDSN +E+ERGITI +KN +I +
Sbjct: 9 AIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRNY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERILSMVD+VLLL+DAVEGPMPQTRFVTRKA G KPIVVVN
Sbjct: 69 RINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVVN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR ARP+WVV+ FDLF L AT+ QLDFPV+Y SAL GYA + +M PLFE
Sbjct: 129 KIDRPGARPDWVVEQVFDLFVSLDATDAQLDFPVVYASALKGYATLDLSHPSTDMTPLFE 188
Query: 1106 AIL-KYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKP 1164
I+ K VP D N P Q+QI SL+YSSY+G IGIGRI G I+ V+I++ + K
Sbjct: 189 TIVSKVVPPQVD-LNGPFQMQISSLDYSSYVGAIGIGRIQRGTIRRNTPVIIIDR-EGKR 246
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPT 1224
++ Q+ F GL RV + A +GDIV +TGIE + I T+CDP + LP L +DEPT
Sbjct: 247 RSGRVLQLLGFLGLQRVDIETAEAGDIVAVTGIENLRISDTLCDPQQVEALPPLTVDEPT 306
Query: 1225 LTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH 1284
+++ F VNNSP AGREGKF+T+RQIK RL+ E+ N+ LRV D + VSGRGELH
Sbjct: 307 VSMTFQVNNSPFAGREGKFLTSRQIKERLEKELIANVALRVAAGADADK-FIVSGRGELH 365
Query: 1285 LTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
L+ILIENMRREGYE SVSRP VI K ++ EP+ENL +DI+E +QG I+Q L R GD
Sbjct: 366 LSILIENMRREGYEFSVSRPEVIKKMVDDIECEPFENLVLDIDEEHQGDIIQNLAKRKGD 425
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
LKN+ K RVRL+Y IP+RGLIGF + F+TLT G+G++ HVF+ YAP +S L
Sbjct: 426 LKNMMPGGKGRVRLDYLIPTRGLIGFHSHFLTLTSGSGVMYHVFDHYAPLIEES---LQT 482
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R GVLIS G A AY+LW LQ RG LFI VYEGMI+G HSRDNDL+VN +EKQ
Sbjct: 483 RHRGVLISNSQGVATAYALWNLQSRGNLFIGPQQAVYEGMIVGQHSRDNDLVVNVCREKQ 542
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
LTNIR++GSDE I L PIK +LE A++FI DDELVEITP IRLRK+ LKE+ER++
Sbjct: 543 LTNIRAAGSDENIILTPPIKFSLEQALQFIADDELVEITPAAIRLRKKLLKEHERRR 599
Score = 143 (55.4 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 41/125 (32%), Positives = 60/125 (48%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + + + +E + + N++ IT L
Sbjct: 8 IAIIAHVDHGKTTLVDQLLQQSGTLNERAAPVERMMDSNILERERGITILAKNTAIRWRN 67
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQTR A G+ IV +
Sbjct: 68 YRINIVDTPGHADFGGEVERILSMVDSVLLLVDAVEGPMPQTRFVTRKAFSWGLKPIVVV 127
Query: 176 NKIDK 180
NKID+
Sbjct: 128 NKIDR 132
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 186 DRIKQDLISEQVIPEEYGG-ASPFISISAKTGVGINKLLENISLQAEILELKAP 238
+R++++LI+ + G A FI +S + + ++ L+EN+ + + P
Sbjct: 333 ERLEKELIANVALRVAAGADADKFI-VSGRGELHLSILIENMRREGYEFSVSRP 385
Score = 39 (18.8 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 12/57 (21%), Positives = 23/57 (40%)
Query: 712 EATKFSNYLSEADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFH 768
E F N + + D+ ++ I + GD++ + + I + LI FH
Sbjct: 396 ECEPFENLVLDIDEEHQGDIIQNLAKRKGDLKNMMPGGKGRVRLDYLIPTRGLIGFH 452
Score = 39 (18.8 bits), Expect = 0.00092, Sum P(4) = 0.00092
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 596 IKNILDNLSKAKNYIRFKLSKKLHIH-TLPILNFF---YDNSIENAMMISKLIDGIKYCM 651
I N+ ++ + +F +S + +H ++ I N Y+ S+ +I K++D I+ C
Sbjct: 340 IANVALRVAAGADADKFIVSGRGELHLSILIENMRREGYEFSVSRPEVIKKMVDDIE-CE 398
Query: 652 QF 653
F
Sbjct: 399 PF 400
Score = 37 (18.1 bits), Expect = 0.00092, Sum P(4) = 0.00092
Identities = 26/106 (24%), Positives = 43/106 (40%)
Query: 246 VIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVE 305
VII R +GK VL G L + + A G I ++ I + P +
Sbjct: 237 VIIIDR--EGKRRSGRVLQLLGFLGLQRVDIETAEAGDIVAVTGIENLRISDTLCD-PQQ 293
Query: 306 IQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHK 351
++ L P + +E V + + R+GKF + K++L K
Sbjct: 294 VEALP--PLTVDEPTVSMTFQVNNSPFAGREGKFLTSRQIKERLEK 337
>UNIPROTKB|Q489A8 [details] [associations]
symbol:typA "GTP-binding protein TypA" species:167879
"Colwellia psychrerythraea 34H" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SUPFAM:SSF54980 eggNOG:COG1217
HOGENOM:HOG000282351 KO:K06207 OMA:GWVRMEF PANTHER:PTHR23115:SF14
TIGRFAMs:TIGR01394 RefSeq:YP_267356.1 ProteinModelPortal:Q489A8
STRING:Q489A8 DNASU:3521608 GeneID:3521608 KEGG:cps:CPS_0606
PATRIC:21464539 BioCyc:CPSY167879:GI48-693-MONOMER Uniprot:Q489A8
Length = 605
Score = 1697 (602.4 bits), Expect = 1.1e-174, P = 1.1e-174
Identities = 324/597 (54%), Positives = 444/597 (74%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + R MDSN+IEKERGITI +KN ++ +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLEQSGTLDTRGGLEERTMDSNDIEKERGITILAKNTAVNWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
R+NI+DTPGHADFGGEVER++SMVD+VLL++DA EGPMPQTRFVT+KA G KPI+V+N
Sbjct: 69 RVNIVDTPGHADFGGEVERVMSMVDSVLLIVDAQEGPMPQTRFVTKKAFAQGLKPILVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+D+ +RP+WV+D F+LFD L AT+EQLDF V+Y SA++G+A+ +M PLF+
Sbjct: 129 KVDKPGSRPDWVMDQVFELFDNLGATDEQLDFKVVYASAINGWASLEEGVTGTDMTPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K VP + Q+QI L+Y+SYLG IG+GRI G +K Q V I N
Sbjct: 189 TIIKEVPQPIADPEGAFQMQISQLDYNSYLGVIGVGRITRGSVKPNQQVTIQLANGGVHN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ + GL+R+ + E +GDI+ ITG+ E+ I T+C P++ GLP L++DEPT+
Sbjct: 249 -AKVGKVFGYLGLERLDIAEGFAGDIIAITGLGELKISDTVCCPTEVEGLPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP G+EGK++T+R IK+RLD E+ +N+ LRV Q + D ++VSGRGELHL
Sbjct: 308 NMTFQVNTSPFCGKEGKYVTSRNIKDRLDKELIHNVALRVEQLEDADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREG+EL+VSRP VI + ++G+L EPYE + +D+EE +QG IM+K+ R +L
Sbjct: 367 GILIENMRREGFELAVSRPEVIIREIDGQLQEPYETVTIDVEEQHQGPIMEKMGVRKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + R+R+++ +PSRGLIGFQ EF+TLT G+GLI H F EY P +K ++G+R
Sbjct: 427 TDMAPDGTGRIRMDFIMPSRGLIGFQTEFMTLTSGSGLIYHTFFEYGP--HKGG-EIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+I +GKA+ +++ LQ RGR+ I H +YEG +IGIHSRDNDL VN +K KQL
Sbjct: 484 KNGVMIGNATGKALTNAIFNLQSRGRMLIGHGVDIYEGQVIGIHSRDNDLTVNALKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
TN+RSSG+DEA L PI ++LE A+EFI++DELVE+TP++IR+RK+FLKEN+RK++
Sbjct: 544 TNVRSSGTDEAQTLTPPIVMSLEQALEFIDNDELVEVTPESIRIRKKFLKENDRKRE 600
Score = 158 (60.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 44/125 (35%), Positives = 62/125 (49%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH--------------IGAYNVVTN-HG 116
V I+ HVDHGKT+L+D + + + GG+ + I A N N +G
Sbjct: 8 VAIIAHVDHGKTTLVDKLLEQSGTLDTRGGLEERTMDSNDIEKERGITILAKNTAVNWNG 67
Query: 117 -SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ +DTPGH F R + D V+L+V A +G MPQTR A G+ I+ I
Sbjct: 68 YRVNIVDTPGHADFGGEVERVMSMVDSVLLIVDAQEGPMPQTRFVTKKAFAQGLKPILVI 127
Query: 176 NKIDK 180
NK+DK
Sbjct: 128 NKVDK 132
Score = 39 (18.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 186 DRIKQDLISEQVIP-EEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAK 244
DR+ ++LI + E+ A F +S + + + L+EN ++ E EL V+ P
Sbjct: 333 DRLDKELIHNVALRVEQLEDADKF-KVSGRGELHLGILIEN--MRREGFELA--VSRPE- 386
Query: 245 GVIIESRLDKGKGPVATVLI 264
VII + + P TV I
Sbjct: 387 -VIIREIDGQLQEPYETVTI 405
>TIGR_CMR|CPS_0606 [details] [associations]
symbol:CPS_0606 "GTP-binding protein TypA" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022
SUPFAM:SSF54980 eggNOG:COG1217 HOGENOM:HOG000282351 KO:K06207
OMA:GWVRMEF PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394
RefSeq:YP_267356.1 ProteinModelPortal:Q489A8 STRING:Q489A8
DNASU:3521608 GeneID:3521608 KEGG:cps:CPS_0606 PATRIC:21464539
BioCyc:CPSY167879:GI48-693-MONOMER Uniprot:Q489A8
Length = 605
Score = 1697 (602.4 bits), Expect = 1.1e-174, P = 1.1e-174
Identities = 324/597 (54%), Positives = 444/597 (74%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL QSGT + R MDSN+IEKERGITI +KN ++ +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLEQSGTLDTRGGLEERTMDSNDIEKERGITILAKNTAVNWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
R+NI+DTPGHADFGGEVER++SMVD+VLL++DA EGPMPQTRFVT+KA G KPI+V+N
Sbjct: 69 RVNIVDTPGHADFGGEVERVMSMVDSVLLIVDAQEGPMPQTRFVTKKAFAQGLKPILVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+D+ +RP+WV+D F+LFD L AT+EQLDF V+Y SA++G+A+ +M PLF+
Sbjct: 129 KVDKPGSRPDWVMDQVFELFDNLGATDEQLDFKVVYASAINGWASLEEGVTGTDMTPLFD 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+K VP + Q+QI L+Y+SYLG IG+GRI G +K Q V I N
Sbjct: 189 TIIKEVPQPIADPEGAFQMQISQLDYNSYLGVIGVGRITRGSVKPNQQVTIQLANGGVHN 248
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
AK+ ++ + GL+R+ + E +GDI+ ITG+ E+ I T+C P++ GLP L++DEPT+
Sbjct: 249 -AKVGKVFGYLGLERLDIAEGFAGDIIAITGLGELKISDTVCCPTEVEGLPALSVDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP G+EGK++T+R IK+RLD E+ +N+ LRV Q + D ++VSGRGELHL
Sbjct: 308 NMTFQVNTSPFCGKEGKYVTSRNIKDRLDKELIHNVALRVEQLEDADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
ILIENMRREG+EL+VSRP VI + ++G+L EPYE + +D+EE +QG IM+K+ R +L
Sbjct: 367 GILIENMRREGFELAVSRPEVIIREIDGQLQEPYETVTIDVEEQHQGPIMEKMGVRKAEL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + R+R+++ +PSRGLIGFQ EF+TLT G+GLI H F EY P +K ++G+R
Sbjct: 427 TDMAPDGTGRIRMDFIMPSRGLIGFQTEFMTLTSGSGLIYHTFFEYGP--HKGG-EIGQR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGV+I +GKA+ +++ LQ RGR+ I H +YEG +IGIHSRDNDL VN +K KQL
Sbjct: 484 KNGVMIGNATGKALTNAIFNLQSRGRMLIGHGVDIYEGQVIGIHSRDNDLTVNALKGKQL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
TN+RSSG+DEA L PI ++LE A+EFI++DELVE+TP++IR+RK+FLKEN+RK++
Sbjct: 544 TNVRSSGTDEAQTLTPPIVMSLEQALEFIDNDELVEVTPESIRIRKKFLKENDRKRE 600
Score = 158 (60.7 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 44/125 (35%), Positives = 62/125 (49%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH--------------IGAYNVVTN-HG 116
V I+ HVDHGKT+L+D + + + GG+ + I A N N +G
Sbjct: 8 VAIIAHVDHGKTTLVDKLLEQSGTLDTRGGLEERTMDSNDIEKERGITILAKNTAVNWNG 67
Query: 117 -SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ +DTPGH F R + D V+L+V A +G MPQTR A G+ I+ I
Sbjct: 68 YRVNIVDTPGHADFGGEVERVMSMVDSVLLIVDAQEGPMPQTRFVTKKAFAQGLKPILVI 127
Query: 176 NKIDK 180
NK+DK
Sbjct: 128 NKVDK 132
Score = 39 (18.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 23/80 (28%), Positives = 38/80 (47%)
Query: 186 DRIKQDLISEQVIP-EEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAK 244
DR+ ++LI + E+ A F +S + + + L+EN ++ E EL V+ P
Sbjct: 333 DRLDKELIHNVALRVEQLEDADKF-KVSGRGELHLGILIEN--MRREGFELA--VSRPE- 386
Query: 245 GVIIESRLDKGKGPVATVLI 264
VII + + P TV I
Sbjct: 387 -VIIREIDGQLQEPYETVTI 405
>UNIPROTKB|Q88AM8 [details] [associations]
symbol:typA "GTP-binding protein TypA" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006298
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0005622 EMBL:AE016853
GenomeReviews:AE016853_GR Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HSSP:P32324 eggNOG:COG1217 HOGENOM:HOG000282351 KO:K06207
OMA:GWVRMEF PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394
RefSeq:NP_790210.1 ProteinModelPortal:Q88AM8 GeneID:1181970
KEGG:pst:PSPTO_0361 PATRIC:19991900 ProtClustDB:CLSK869129
BioCyc:PSYR223283:GJIX-358-MONOMER Uniprot:Q88AM8
Length = 606
Score = 1679 (596.1 bits), Expect = 8.9e-173, P = 8.9e-173
Identities = 326/600 (54%), Positives = 439/600 (73%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGT + + + R+MDSN+ EKERGITI +KN +I +NG
Sbjct: 9 AIIAHVDHGKTTLVDKLLRQSGTLERGELNDERVMDSNDQEKERGITILAKNTAINWNGY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
INI+DTPGHADFGGEVER++SMVD+VLLL+DA +GPMPQTRFVT+KA + G +PIVV+N
Sbjct: 69 HINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ARP+WV+D FDLFD L ATEEQLDF V+Y SAL+G A + +M PL++
Sbjct: 129 KVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLDHTEMAEDMTPLYQ 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
+I+ VP + + P Q+QI +L+Y+S+LG IG+GRI G++K VV ++ + K
Sbjct: 189 SIVDNVPAPAVDRDGPFQMQISALDYNSFLGIIGVGRIARGKVKPNTQVVAIDA-NGKRR 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I ++ GL RV V EA +GDIV I+G EE+ I T+CDP + L +DEPT+
Sbjct: 248 NGRILKLMGHHGLHRVDVEEAAAGDIVCISGFEELFISDTLCDPQNVEAMKPLTVDEPTV 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SP G+EGKF+T+R IK RLD E+ N+ LRV + D ++VSGRGELHL
Sbjct: 308 SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDTADK-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
++LIE MRREG+E+ V RP VI + ++G +EP+EN+ +D+ E +QG IM+++ R GDL
Sbjct: 367 SVLIETMRREGFEMGVGRPEVIIRMVDGVKHEPFENVTIDLPEESQGSIMEQIGIRKGDL 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
N+ + K RVRLEY IP+RGLIGF+NEF+TLT G G+++ +F+ Y KS D+ R
Sbjct: 427 TNMVPDGKGRVRLEYNIPARGLIGFRNEFLTLTSGAGILTSIFDRYDVM--KSG-DMSGR 483
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVL+S +GKA+ YSL LQ RG+LF+ H + VYEG I+GI+SRDNDL VNP K K+L
Sbjct: 484 QNGVLVSVATGKALTYSLETLQARGKLFLGHGEDVYEGQIVGINSRDNDLGVNPTKGKKL 543
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
N+R+SG DE I L+ PI+ TLE A+EF+ +DEL E+TPK+IRLRK+ L E+ER + K
Sbjct: 544 DNMRASGKDETIALVPPIRFTLEQALEFVQEDELCEVTPKSIRLRKKILGESERTRAAKK 603
Score = 148 (57.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 88/286 (30%), Positives = 135/286 (47%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTN-----------VVFS----EAGGITQHIGAYNVVTN- 114
+ I+ HVDHGKT+L+D +R++ V+ S + GIT I A N N
Sbjct: 8 IAIIAHVDHGKTTLVDKLLRQSGTLERGELNDERVMDSNDQEKERGIT--ILAKNTAINW 65
Query: 115 HG-SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
+G I +DTPGH F R + D V+L+V A DG MPQTR A +G+ IV
Sbjct: 66 NGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLRPIV 125
Query: 174 AINKIDKL----DINLDRIKQDLISEQVIPEEYGGASPFISISAKTGV-GIN--KLLENI 226
INK+D+ D LD+I DL EE + SA G+ G++ ++ E++
Sbjct: 126 VINKVDRPGARPDWVLDQIF-DLFDNLGATEEQLDFK-VVYASALNGIAGLDHTEMAEDM 183
Query: 227 S-LQAEILE-LKAPVTTPAKGVIIE-SRLDKGK--GPVATVLIQSGTLRCSDIVVA-GAS 280
+ L I++ + AP ++ S LD G + I G ++ + VVA A+
Sbjct: 184 TPLYQSIVDNVPAPAVDRDGPFQMQISALDYNSFLGIIGVGRIARGKVKPNTQVVAIDAN 243
Query: 281 ----YGRIRSMLNENGKNILEAGPSIPVEIQGLTKVPFSG-EELFV 321
GRI ++ +G + ++ + +I V SG EELF+
Sbjct: 244 GKRRNGRILKLMGHHGLHRVDVEEAAAGDI-----VCISGFEELFI 284
>UNIPROTKB|Q74FV3 [details] [associations]
symbol:typA "Translation-regulating membrane GTPase TypA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006298
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0005622 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HOGENOM:HOG000282351 KO:K06207 OMA:GWVRMEF PANTHER:PTHR23115:SF14
TIGRFAMs:TIGR01394 RefSeq:NP_951558.1 ProteinModelPortal:Q74FV3
DNASU:2686087 GeneID:2686087 KEGG:gsu:GSU0500 PATRIC:22023755
ProtClustDB:CLSK827878 BioCyc:GSUL243231:GH27-515-MONOMER
Uniprot:Q74FV3
Length = 598
Score = 1598 (567.6 bits), Expect = 3.4e-164, P = 3.4e-164
Identities = 312/597 (52%), Positives = 437/597 (73%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D +L+ +G FR+N+ I R+MDSN++EKERGITI +KN S+ +
Sbjct: 9 AIIAHVDHGKTTLVDAMLKHAGVFRENEAITERVMDSNDLEKERGITILAKNLSVHHGRY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER+L MVD+VLLL+DA++GPMPQTRFV +K+L LG KPIVV+N
Sbjct: 69 KINIVDTPGHADFGGEVERVLKMVDSVLLLVDALDGPMPQTRFVLKKSLDLGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +RP+ VVD FDLF +L AT+EQLDFP++YTSA G+A + + +M PLF
Sbjct: 129 KIDRPGSRPDEVVDMVFDLFCELNATDEQLDFPIVYTSAKLGFAKLDLNSDSNSMEPLFA 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I V +S P QL + +++Y+ Y+G+I GRI +GR+K+ + V ++ D
Sbjct: 189 VIESNVHPPAGDSKAPFQLLVTNIDYNDYIGRIATGRIFNGRVKAGETVALVRR-DGSIE 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +I ++ ++GL +V + EA +GDIV + G +++ IG T+ P LP ++IDEPT+
Sbjct: 248 RGRITKLLGYEGLKQVEIPEACTGDIVTVAGFDDVGIGETLAAADNPVALPYVSIDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++NF+VN+SP AGREGKF+T+R I+ RLD E++ N+ LRV + D+ ++VSGRGELHL
Sbjct: 308 SMNFIVNSSPFAGREGKFVTSRNIRERLDRELRTNVSLRVEDTANADT-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+E++VS+P VI + ++G EP E L VD+ QG I++K+ R G++
Sbjct: 367 SILIENMRREGFEMAVSKPEVILRVIDGTKMEPMEYLVVDVPSEFQGAIIEKMGPRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ E VRLE+ +P+RGLIG + E +T TRGT +++H F +YAP+ K D+ R
Sbjct: 427 TSLQ-PMGETVRLEFVVPARGLIGLRGELLTETRGTAVMTHTFHDYAPY----KGDIPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ G+ AY+L LQ RG LFI VY GMIIG H++DNDL VNP K K+L
Sbjct: 482 KNGVLIAMELGETTAYALDALQPRGILFIGPGVEVYGGMIIGQHAKDNDLDVNPCKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
TN+R+SGSD+AI+L P +TLE A+EFI+DDELVE+TP++IRLRK+ L N+RK+K
Sbjct: 542 TNVRASGSDDAIKLTPPRILTLEQALEFIDDDELVEVTPQSIRLRKKELDPNKRKRK 598
Score = 192 (72.6 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 79/258 (30%), Positives = 120/258 (46%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHI----------G----AYNVVTNHG- 116
+ I+ HVDHGKT+L+D + K VF E IT+ + G A N+ +HG
Sbjct: 8 IAIIAHVDHGKTTLVDAMLKHAGVFRENEAITERVMDSNDLEKERGITILAKNLSVHHGR 67
Query: 117 -SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R K+ D V+L+V A DG MPQTR + + G+ IV I
Sbjct: 68 YKINIVDTPGHADFGGEVERVLKMVDSVLLLVDALDGPMPQTRFVLKKSLDLGLKPIVVI 127
Query: 176 NKIDKLDINLDRIKQ---DLISEQVIPEEYGGASPFISISAKTGVG-INKLLENISLQAE 231
NKID+ D + DL E +E P + SAK G ++ ++ S++
Sbjct: 128 NKIDRPGSRPDEVVDMVFDLFCELNATDEQLDF-PIVYTSAKLGFAKLDLNSDSNSMEPL 186
Query: 232 ILELKAPVTTPA---KGV--IIESRLDKGK--GPVATVLIQSGTLRCSDIVVA----GA- 279
+++ V PA K ++ + +D G +AT I +G ++ + V G+
Sbjct: 187 FAVIESNVHPPAGDSKAPFQLLVTNIDYNDYIGRIATGRIFNGRVKAGETVALVRRDGSI 246
Query: 280 SYGRIRSMLNENGKNILE 297
GRI +L G +E
Sbjct: 247 ERGRITKLLGYEGLKQVE 264
>TIGR_CMR|GSU_0500 [details] [associations]
symbol:GSU_0500 "GTP-binding protein TypA" species:243231
"Geobacter sulfurreducens PCA" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HOGENOM:HOG000282351 KO:K06207 OMA:GWVRMEF
PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394 RefSeq:NP_951558.1
ProteinModelPortal:Q74FV3 DNASU:2686087 GeneID:2686087
KEGG:gsu:GSU0500 PATRIC:22023755 ProtClustDB:CLSK827878
BioCyc:GSUL243231:GH27-515-MONOMER Uniprot:Q74FV3
Length = 598
Score = 1598 (567.6 bits), Expect = 3.4e-164, P = 3.4e-164
Identities = 312/597 (52%), Positives = 437/597 (73%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D +L+ +G FR+N+ I R+MDSN++EKERGITI +KN S+ +
Sbjct: 9 AIIAHVDHGKTTLVDAMLKHAGVFRENEAITERVMDSNDLEKERGITILAKNLSVHHGRY 68
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INI+DTPGHADFGGEVER+L MVD+VLLL+DA++GPMPQTRFV +K+L LG KPIVV+N
Sbjct: 69 KINIVDTPGHADFGGEVERVLKMVDSVLLLVDALDGPMPQTRFVLKKSLDLGLKPIVVIN 128
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +RP+ VVD FDLF +L AT+EQLDFP++YTSA G+A + + +M PLF
Sbjct: 129 KIDRPGSRPDEVVDMVFDLFCELNATDEQLDFPIVYTSAKLGFAKLDLNSDSNSMEPLFA 188
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I V +S P QL + +++Y+ Y+G+I GRI +GR+K+ + V ++ D
Sbjct: 189 VIESNVHPPAGDSKAPFQLLVTNIDYNDYIGRIATGRIFNGRVKAGETVALVRR-DGSIE 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +I ++ ++GL +V + EA +GDIV + G +++ IG T+ P LP ++IDEPT+
Sbjct: 248 RGRITKLLGYEGLKQVEIPEACTGDIVTVAGFDDVGIGETLAAADNPVALPYVSIDEPTI 307
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++NF+VN+SP AGREGKF+T+R I+ RLD E++ N+ LRV + D+ ++VSGRGELHL
Sbjct: 308 SMNFIVNSSPFAGREGKFVTSRNIRERLDRELRTNVSLRVEDTANADT-FKVSGRGELHL 366
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+ILIENMRREG+E++VS+P VI + ++G EP E L VD+ QG I++K+ R G++
Sbjct: 367 SILIENMRREGFEMAVSKPEVILRVIDGTKMEPMEYLVVDVPSEFQGAIIEKMGPRKGEM 426
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ E VRLE+ +P+RGLIG + E +T TRGT +++H F +YAP+ K D+ R
Sbjct: 427 TSLQ-PMGETVRLEFVVPARGLIGLRGELLTETRGTAVMTHTFHDYAPY----KGDIPGR 481
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
+NGVLI+ G+ AY+L LQ RG LFI VY GMIIG H++DNDL VNP K K+L
Sbjct: 482 KNGVLIAMELGETTAYALDALQPRGILFIGPGVEVYGGMIIGQHAKDNDLDVNPCKGKKL 541
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
TN+R+SGSD+AI+L P +TLE A+EFI+DDELVE+TP++IRLRK+ L N+RK+K
Sbjct: 542 TNVRASGSDDAIKLTPPRILTLEQALEFIDDDELVEVTPQSIRLRKKELDPNKRKRK 598
Score = 192 (72.6 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 79/258 (30%), Positives = 120/258 (46%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHI----------G----AYNVVTNHG- 116
+ I+ HVDHGKT+L+D + K VF E IT+ + G A N+ +HG
Sbjct: 8 IAIIAHVDHGKTTLVDAMLKHAGVFRENEAITERVMDSNDLEKERGITILAKNLSVHHGR 67
Query: 117 -SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R K+ D V+L+V A DG MPQTR + + G+ IV I
Sbjct: 68 YKINIVDTPGHADFGGEVERVLKMVDSVLLLVDALDGPMPQTRFVLKKSLDLGLKPIVVI 127
Query: 176 NKIDKLDINLDRIKQ---DLISEQVIPEEYGGASPFISISAKTGVG-INKLLENISLQAE 231
NKID+ D + DL E +E P + SAK G ++ ++ S++
Sbjct: 128 NKIDRPGSRPDEVVDMVFDLFCELNATDEQLDF-PIVYTSAKLGFAKLDLNSDSNSMEPL 186
Query: 232 ILELKAPVTTPA---KGV--IIESRLDKGK--GPVATVLIQSGTLRCSDIVVA----GA- 279
+++ V PA K ++ + +D G +AT I +G ++ + V G+
Sbjct: 187 FAVIESNVHPPAGDSKAPFQLLVTNIDYNDYIGRIATGRIFNGRVKAGETVALVRRDGSI 246
Query: 280 SYGRIRSMLNENGKNILE 297
GRI +L G +E
Sbjct: 247 ERGRITKLLGYEGLKQVE 264
>TIGR_CMR|CJE_0038 [details] [associations]
symbol:CJE_0038 "GTP-binding protein TypA" species:195099
"Campylobacter jejuni RM1221" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
EMBL:CP000025 GenomeReviews:CP000025_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG1217 HOGENOM:HOG000282351 KO:K06207
OMA:GWVRMEF PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394 PIR:B81420
RefSeq:YP_178065.1 ProteinModelPortal:Q5HXC0 STRING:Q5HXC0
GeneID:3230802 KEGG:cjr:CJE0038 PATRIC:20041775
ProtClustDB:CLSK872368 BioCyc:CJEJ195099:GJC0-42-MONOMER
Uniprot:Q5HXC0
Length = 602
Score = 1574 (559.1 bits), Expect = 1.2e-161, P = 1.2e-161
Identities = 311/596 (52%), Positives = 423/596 (70%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
A+IAHVDHGKTT++D LL+QSGTF + + I+ R+MDSN+IEKERGITI SKN +I Y GT
Sbjct: 8 AVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDSNDIEKERGITILSKNTAINYKGT 67
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INIIDTPGHADFGGEVER+L M+D VLLL+DA EG MPQT+FV +KAL LG KPIVV+N
Sbjct: 68 KINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQEGVMPQTKFVVKKALSLGLKPIVVIN 127
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID+ A PE V++ FDLF L A +EQLDF ++Y +A +GYA + NM PLF+
Sbjct: 128 KIDKPAADPERVINEIFDLFVALDANDEQLDFAIVYAAAKNGYAKLDLNDESDNMEPLFK 187
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL+ VP + NPLQLQ+ +L Y +++GKIGI RI +G +K Q V++ K N
Sbjct: 188 TILERVPAPSGSDENPLQLQVFTLGYDNFVGKIGIARIFNGVVKKNQSVMLAKADGTKVN 247
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+I+++ F GL+++ + EA SGDIV I G E + +G ++ DP+ P L L+I+EPTL
Sbjct: 248 -GRISKLIGFMGLEKMDIEEAGSGDIVAIAGFEALDVGDSVVDPNNPMPLDPLHIEEPTL 306
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+I F VN+ PLAG EGK +T+ +I RL+ E+K NI ++ + ++VSGRGEL +
Sbjct: 307 SIVFSVNDGPLAGTEGKHVTSNKIAERLEAEMKTNIAMKYEST--GEGKFKVSGRGELQI 364
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TIL ENMRREG+E + RP VI K +G EP+E+L +D+ E G +++KL R ++
Sbjct: 365 TILAENMRREGFEFCMGRPEVIVKVEDGVKTEPFEHLVIDVPEEFSGAVIEKLGKRKAEM 424
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
K + + RLE+ IP+RGLIGF+++F+T T+G G+++H F E+ PF + KR
Sbjct: 425 KTMAPTGDGQTRLEFEIPARGLIGFRSQFLTDTKGEGVMNHSFLEFRPFSGAVE----KR 480
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NG LIS +G A+ YSL+ LQ+RG LFI VY GMIIG HSR NDL VNPIK K L
Sbjct: 481 NNGALISMENGVALGYSLFNLQERGVLFIEPQTKVYTGMIIGEHSRPNDLDVNPIKGKNL 540
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R+SGSD+AI+L+ P K++LE A+E+I +DELVE+TP N+R+RKR+L +RK+
Sbjct: 541 TNVRASGSDDAIKLVPPRKLSLERALEWIEEDELVEVTPVNVRVRKRYLDPTQRKR 596
Score = 179 (68.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 68/237 (28%), Positives = 113/237 (47%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHI----------G----AYNVVTNH-G 116
+ ++ HVDHGKT+++D + K + FSE I++ + G + N N+ G
Sbjct: 7 IAVIAHVDHGKTTMVDELLKQSGTFSEREQISERVMDSNDIEKERGITILSKNTAINYKG 66
Query: 117 S-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+ I +DTPGH F R K+ D V+L+V A +GVMPQT+ + A G+ IV I
Sbjct: 67 TKINIIDTPGHADFGGEVERVLKMIDGVLLLVDAQEGVMPQTKFVVKKALSLGLKPIVVI 126
Query: 176 NKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISI--SAKTG---VGINKLLENIS-LQ 229
NKIDK + +R+ ++ V + F + +AK G + +N +N+ L
Sbjct: 127 NKIDKPAADPERVINEIFDLFVALDANDEQLDFAIVYAAAKNGYAKLDLNDESDNMEPLF 186
Query: 230 AEILE-LKAPVTT---PAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYG 282
ILE + AP + P + + D G + I +G ++ + V+ + G
Sbjct: 187 KTILERVPAPSGSDENPLQLQVFTLGYDNFVGKIGIARIFNGVVKKNQSVMLAKADG 243
>TIGR_CMR|BA_4166 [details] [associations]
symbol:BA_4166 "GTP-binding protein TypA" species:198094
"Bacillus anthracis str. Ames" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 HSSP:P13551
HOGENOM:HOG000282351 KO:K06207 OMA:GWVRMEF PANTHER:PTHR23115:SF14
TIGRFAMs:TIGR01394 RefSeq:NP_846404.1 RefSeq:YP_020813.1
RefSeq:YP_030118.1 ProteinModelPortal:Q81MS8
EnsemblBacteria:EBBACT00000010645 EnsemblBacteria:EBBACT00000018031
EnsemblBacteria:EBBACT00000022207 GeneID:1088853 GeneID:2818138
GeneID:2851735 KEGG:ban:BA_4166 KEGG:bar:GBAA_4166 KEGG:bat:BAS3868
ProtClustDB:CLSK2484784 BioCyc:BANT260799:GJAJ-3925-MONOMER
BioCyc:BANT261594:GJ7F-4053-MONOMER Uniprot:Q81MS8
Length = 614
Score = 1548 (550.0 bits), Expect = 6.8e-159, P = 6.8e-159
Identities = 302/602 (50%), Positives = 428/602 (71%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQ+GTFR N+++ R MDSN++E+ERGITI +KN +I Y
Sbjct: 12 AIIAHVDHGKTTLVDQLLRQAGTFRANEHVEERAMDSNDLERERGITILAKNTAIHYEDK 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERI+ MVD VLL++DA EG MPQTRFV +KAL+ PIVVVN
Sbjct: 72 RINILDTPGHADFGGEVERIMKMVDGVLLVVDAYEGCMPQTRFVLKKALEQNLTPIVVVN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN-ENSKARQG-NMIPL 1103
KIDR ARP+ VVD DLF +L A E+QL+FPV++ SA++G A+ +++ A Q NM L
Sbjct: 132 KIDRDFARPDEVVDEVIDLFIELGANEDQLEFPVVFASAMNGTASLDSNPANQEENMKSL 191
Query: 1104 FEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK 1163
F+ I++++P DNS PLQ Q+ L+Y+ Y+G+IG+GR+ G +K Q V +M D
Sbjct: 192 FDTIIEHIPAPIDNSEEPLQFQVALLDYNDYVGRIGVGRVFRGTMKVGQQVALMK-VDGS 250
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
+ ++ ++ + GL R + EA +GD+V ++G+E+I +G T+C + LP+L IDEP
Sbjct: 251 VKQFRVTKLFGYMGLKRQEIEEAKAGDLVAVSGMEDINVGETVCPVEHQDALPLLRIDEP 310
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
TL + F+VNNSP AGREGK+IT+R+I+ RL +++ ++ LRV + D+ + VSGRGEL
Sbjct: 311 TLQMTFLVNNSPFAGREGKYITSRKIEERLRSQLETDVSLRVDNTESPDA-WIVSGRGEL 369
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGG 1343
HL+ILIENMRREGYEL VS+P VI K ++G EP E + +D+ E G IM+ + R G
Sbjct: 370 HLSILIENMRREGYELQVSKPEVIIKEVDGVRCEPVERVQIDVPEEYTGSIMESMGARKG 429
Query: 1344 DLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLG 1403
++ ++ N +VRL + +P+RGLIG+ EF+TLTRG G+++H F+ Y P + +G
Sbjct: 430 EMLDMVNNGNGQVRLTFMVPARGLIGYTTEFLTLTRGYGILNHTFDCYQPVHAGQ---VG 486
Query: 1404 KRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEK 1463
RR GVL+S +GKA Y + +++DRG +F+ VY GMI+G H+R+NDL VN +K K
Sbjct: 487 GRRQGVLVSLETGKASQYGIMQVEDRGVIFVEPGTEVYAGMIVGEHTRENDLTVNVVKMK 546
Query: 1464 QLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKL 1523
Q TNIRS+ D+ + P +TLE ++E++NDDE E+TP++IRLRK+ L ++ER++
Sbjct: 547 QQTNIRSATKDQTSTMKKPRLMTLEESLEYLNDDEFCEVTPESIRLRKKILDKSERERAA 606
Query: 1524 HK 1525
K
Sbjct: 607 KK 608
Score = 147 (56.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 45/138 (32%), Positives = 67/138 (48%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS----------EAGGITQHIG----AYNVVTNHGS 117
+ I+ HVDHGKT+L+D + + F ++ + + G A N ++
Sbjct: 11 IAIIAHVDHGKTTLVDQLLRQAGTFRANEHVEERAMDSNDLERERGITILAKNTAIHYED 70
Query: 118 --ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I LDTPGH F R K+ D V+LVV A +G MPQTR + A + IV +
Sbjct: 71 KRINILDTPGHADFGGEVERIMKMVDGVLLVVDAYEGCMPQTRFVLKKALEQNLTPIVVV 130
Query: 176 NKIDKLDINLDRIKQDLI 193
NKID+ D + ++I
Sbjct: 131 NKIDRDFARPDEVVDEVI 148
>UNIPROTKB|Q2GGD5 [details] [associations]
symbol:typA "GTP-binding protein TypA" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006298
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG1217
HOGENOM:HOG000282351 KO:K06207 PANTHER:PTHR23115:SF14
TIGRFAMs:TIGR01394 OMA:GPLAQTK RefSeq:YP_507498.1
ProteinModelPortal:Q2GGD5 STRING:Q2GGD5 GeneID:3927468
KEGG:ech:ECH_0693 PATRIC:20576834 ProtClustDB:CLSK749496
BioCyc:ECHA205920:GJNR-695-MONOMER Uniprot:Q2GGD5
Length = 614
Score = 1524 (541.5 bits), Expect = 2.4e-156, P = 2.4e-156
Identities = 300/610 (49%), Positives = 429/610 (70%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
LS + + AIIAHVDHGKTTL+D +L+QSGTFR+NQ++ R+MD+N++E+ERGITI
Sbjct: 2 LSQGDYQSICNLAIIAHVDHGKTTLLDGMLKQSGTFRENQDVAERVMDNNDLERERGITI 61
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+K S+ + G +INIIDTPGHADFGGEVER+LSM D VLLL+DA EGPMPQT+FV KA
Sbjct: 62 LAKCTSVIWQGKKINIIDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKA 121
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
LK G PIV++NK+DR ++R + V+D ++LF L AT EQLDFP++Y S +G+ +N
Sbjct: 122 LKAGLLPIVIINKVDRPDSRVDEVLDEVYELFINLDATSEQLDFPILYASGRNGWCVKNL 181
Query: 1094 KARQGNMIPLFEAILKYV-PVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQ 1152
+ +++PLFEAI++YV PV D +N P + + LE +LG+I G+I +G I+
Sbjct: 182 SDNRESLVPLFEAIVEYVKPVSYD-ANAPFTMLLTLLESDKFLGRILTGKIYTGTIRVND 240
Query: 1153 DVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKP 1212
V ++N + K+ ++ F G+ R+ + EA +GDI+ + G+E+ + +I D S
Sbjct: 241 SVKVLNLSGEVVEYGKLTKLLAFSGVKRIPIKEAKAGDIIAVAGLEKASVSDSILDSSIN 300
Query: 1213 NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDD 1272
+ +D PT+ + VN+SP AG EG +T+ IK RL E + N+ + V + + D
Sbjct: 301 FPITSTPVDPPTMAVTISVNDSPFAGTEGVKLTSTVIKARLVAEAETNVAITVKETEQGD 360
Query: 1273 SIYEVSGRGELHLTILIENMRREGYELSVSRPRVIF-KTLNGELYEPYENLFVDIEEINQ 1331
+ YEV GRGEL L +LIE MRREG+ELSVSRPRV+ K G++ EP E + +D++E
Sbjct: 361 A-YEVGGRGELQLGVLIETMRREGFELSVSRPRVLLRKDDQGQVLEPIEEVVIDVDEAYS 419
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G+IM+KL++R GD++++ + K+RVR+ + +PSRGLIG+Q EF+T + GTG+++ +F Y
Sbjct: 420 GVIMEKLSFRKGDMRDLRPSGKDRVRMIFLVPSRGLIGYQGEFLTDSHGTGIMNRLFHSY 479
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
AP K ++ R NGVLIS G AVAY+++ LQDRG +F+ D VY GMI+G+H+R
Sbjct: 480 APH----KGNIPTRNNGVLISTDKGDAVAYAIFNLQDRGIMFVKPQDKVYCGMIVGLHNR 535
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
+ND+ VN +K KQLTNIR++GSDEA++L+ P +TLE I FINDDELVE TPK+IRLRK
Sbjct: 536 ENDIDVNVLKGKQLTNIRAAGSDEAVRLVPPKVMTLEEMIAFINDDELVECTPKSIRLRK 595
Query: 1512 RFLKENERKK 1521
++L NERK+
Sbjct: 596 KYLDPNERKR 605
Score = 202 (76.2 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 75/257 (29%), Positives = 120/257 (46%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+LLD + K + F E + + + N + IT L
Sbjct: 13 LAIIAHVDHGKTTLLDGMLKQSGTFRENQDVAERVMDNNDLERERGITILAKCTSVIWQG 72
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT+ ++ A +G+ IV I
Sbjct: 73 KKINIIDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKALKAGLLPIVII 132
Query: 176 NKIDKLDINLDRIKQDL----ISEQVIPEEYGGASPFISISAKTGVGINKLLEN----IS 227
NK+D+ D +D + ++ I+ E+ P + S + G + L +N +
Sbjct: 133 NKVDRPDSRVDEVLDEVYELFINLDATSEQLD--FPILYASGRNGWCVKNLSDNRESLVP 190
Query: 228 LQAEILELKAPVTTPAKG------VIIESRLDKGKGPVATVLIQSGTLRCSDIV----VA 277
L I+E PV+ A ++ES DK G + T I +GT+R +D V ++
Sbjct: 191 LFEAIVEYVKPVSYDANAPFTMLLTLLES--DKFLGRILTGKIYTGTIRVNDSVKVLNLS 248
Query: 278 G--ASYGRIRSMLNENG 292
G YG++ +L +G
Sbjct: 249 GEVVEYGKLTKLLAFSG 265
>TIGR_CMR|ECH_0693 [details] [associations]
symbol:ECH_0693 "GTP-binding protein TypA" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0005622 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG1217 HOGENOM:HOG000282351 KO:K06207
PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394 OMA:GPLAQTK
RefSeq:YP_507498.1 ProteinModelPortal:Q2GGD5 STRING:Q2GGD5
GeneID:3927468 KEGG:ech:ECH_0693 PATRIC:20576834
ProtClustDB:CLSK749496 BioCyc:ECHA205920:GJNR-695-MONOMER
Uniprot:Q2GGD5
Length = 614
Score = 1524 (541.5 bits), Expect = 2.4e-156, P = 2.4e-156
Identities = 300/610 (49%), Positives = 429/610 (70%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITI 973
LS + + AIIAHVDHGKTTL+D +L+QSGTFR+NQ++ R+MD+N++E+ERGITI
Sbjct: 2 LSQGDYQSICNLAIIAHVDHGKTTLLDGMLKQSGTFRENQDVAERVMDNNDLERERGITI 61
Query: 974 FSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKA 1033
+K S+ + G +INIIDTPGHADFGGEVER+LSM D VLLL+DA EGPMPQT+FV KA
Sbjct: 62 LAKCTSVIWQGKKINIIDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKA 121
Query: 1034 LKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENS 1093
LK G PIV++NK+DR ++R + V+D ++LF L AT EQLDFP++Y S +G+ +N
Sbjct: 122 LKAGLLPIVIINKVDRPDSRVDEVLDEVYELFINLDATSEQLDFPILYASGRNGWCVKNL 181
Query: 1094 KARQGNMIPLFEAILKYV-PVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQ 1152
+ +++PLFEAI++YV PV D +N P + + LE +LG+I G+I +G I+
Sbjct: 182 SDNRESLVPLFEAIVEYVKPVSYD-ANAPFTMLLTLLESDKFLGRILTGKIYTGTIRVND 240
Query: 1153 DVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKP 1212
V ++N + K+ ++ F G+ R+ + EA +GDI+ + G+E+ + +I D S
Sbjct: 241 SVKVLNLSGEVVEYGKLTKLLAFSGVKRIPIKEAKAGDIIAVAGLEKASVSDSILDSSIN 300
Query: 1213 NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDD 1272
+ +D PT+ + VN+SP AG EG +T+ IK RL E + N+ + V + + D
Sbjct: 301 FPITSTPVDPPTMAVTISVNDSPFAGTEGVKLTSTVIKARLVAEAETNVAITVKETEQGD 360
Query: 1273 SIYEVSGRGELHLTILIENMRREGYELSVSRPRVIF-KTLNGELYEPYENLFVDIEEINQ 1331
+ YEV GRGEL L +LIE MRREG+ELSVSRPRV+ K G++ EP E + +D++E
Sbjct: 361 A-YEVGGRGELQLGVLIETMRREGFELSVSRPRVLLRKDDQGQVLEPIEEVVIDVDEAYS 419
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
G+IM+KL++R GD++++ + K+RVR+ + +PSRGLIG+Q EF+T + GTG+++ +F Y
Sbjct: 420 GVIMEKLSFRKGDMRDLRPSGKDRVRMIFLVPSRGLIGYQGEFLTDSHGTGIMNRLFHSY 479
Query: 1392 APFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSR 1451
AP K ++ R NGVLIS G AVAY+++ LQDRG +F+ D VY GMI+G+H+R
Sbjct: 480 APH----KGNIPTRNNGVLISTDKGDAVAYAIFNLQDRGIMFVKPQDKVYCGMIVGLHNR 535
Query: 1452 DNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
+ND+ VN +K KQLTNIR++GSDEA++L+ P +TLE I FINDDELVE TPK+IRLRK
Sbjct: 536 ENDIDVNVLKGKQLTNIRAAGSDEAVRLVPPKVMTLEEMIAFINDDELVECTPKSIRLRK 595
Query: 1512 RFLKENERKK 1521
++L NERK+
Sbjct: 596 KYLDPNERKR 605
Score = 202 (76.2 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 75/257 (29%), Positives = 120/257 (46%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+LLD + K + F E + + + N + IT L
Sbjct: 13 LAIIAHVDHGKTTLLDGMLKQSGTFRENQDVAERVMDNNDLERERGITILAKCTSVIWQG 72
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D V+L+V A +G MPQT+ ++ A +G+ IV I
Sbjct: 73 KKINIIDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKALKAGLLPIVII 132
Query: 176 NKIDKLDINLDRIKQDL----ISEQVIPEEYGGASPFISISAKTGVGINKLLEN----IS 227
NK+D+ D +D + ++ I+ E+ P + S + G + L +N +
Sbjct: 133 NKVDRPDSRVDEVLDEVYELFINLDATSEQLD--FPILYASGRNGWCVKNLSDNRESLVP 190
Query: 228 LQAEILELKAPVTTPAKG------VIIESRLDKGKGPVATVLIQSGTLRCSDIV----VA 277
L I+E PV+ A ++ES DK G + T I +GT+R +D V ++
Sbjct: 191 LFEAIVEYVKPVSYDANAPFTMLLTLLES--DKFLGRILTGKIYTGTIRVNDSVKVLNLS 248
Query: 278 G--ASYGRIRSMLNENG 292
G YG++ +L +G
Sbjct: 249 GEVVEYGKLTKLLAFSG 265
>TIGR_CMR|SO_1204 [details] [associations]
symbol:SO_1204 "translation initiation factor IF-2"
species:211586 "Shewanella oneidensis MR-1" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006847 InterPro:IPR009061 Pfam:PF00009 Pfam:PF03144
Pfam:PF04760 PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0003924 GO:GO:0006184 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003743 InterPro:IPR009000
SUPFAM:SSF50447 SUPFAM:SSF46955 eggNOG:COG0532 KO:K02519
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156
TIGRFAMs:TIGR00487 HOGENOM:HOG000076907 ProtClustDB:PRK05306
HAMAP:MF_00100_B InterPro:IPR013575 Pfam:PF08364 OMA:NILGIAE
RefSeq:NP_716829.1 ProteinModelPortal:Q8EHL5 SMR:Q8EHL5
PRIDE:Q8EHL5 GeneID:1169032 KEGG:son:SO_1204 PATRIC:23522066
Uniprot:Q8EHL5
Length = 885
Score = 1522 (540.8 bits), Expect = 3.8e-156, P = 3.8e-156
Identities = 303/539 (56%), Positives = 396/539 (73%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK++ +IK +MK+G MVTINQVLDQETA ++ EEMGH + N+ E +L+E ++
Sbjct: 319 MAVKATEIIKQMMKMGSMVTINQVLDQETAQLVAEEMGHKVVLIRENELEQQVLSERDEE 378
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+ RAP+VTIMGHVDHGKTSLLDYIR+ V EAGGITQHIGAY+V T +G ITF
Sbjct: 379 GGVKLEPRAPVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETENGMITF 438
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AFTAMRARGAK TDIVVLVVAADDGVMPQT EAI HAK VPLIVA+NK+DK
Sbjct: 439 LDTPGHAAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAGNVPLIVAVNKMDK 498
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ ++DR+K +L V+ E++GG + F +SAKTG G++ LLE I LQAE+LELKA
Sbjct: 499 PEADIDRVKSELSQHGVMSEDWGGDNMFAFVSAKTGAGVDDLLEGILLQAEVLELKAVRD 558
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
A GV+IES+LDKG+GPVAT+L+Q GTLR DIV+ G YG+IR+M +ENG++I EAGP
Sbjct: 559 GMAAGVVIESQLDKGRGPVATILVQEGTLRQGDIVLCGLEYGKIRAMKDENGRSITEAGP 618
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +G+E V+ +E+KARE+ L+RQGKFRDVKL++Q+ K ENMF ++
Sbjct: 619 SIPVEILGLSGVPSAGDEATVVRDERKAREVALYRQGKFRDVKLARQQKSKLENMFANMT 678
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +VK L I++K DV GS E +T+SL LSTD+VK+ +I VG + E+D LA AS AI
Sbjct: 679 EGEVKELNIVLKADVQGSLEAITDSLMGLSTDEVKVNIIARGVGALTETDATLAAASNAI 738
Query: 421 IIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQ 480
++GFNVRADA RK + E+K+ +T ++ E K+ ++GLAE+R
Sbjct: 739 MVGFNVRADAQARKTIENESVDLRYYSVIYNLIDEVKAAMTGMLSPEFKQQIIGLAEVRD 798
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V K+ IAGC + EG I+R + IR+LR+ +I+ GEL+SL+RFKD+V EV+ G EC
Sbjct: 799 VFKSPKLGAIAGCMVTEGTIKRSAPIRVLRDNVVIFEGELESLRRFKDDVNEVRNGMEC 857
Score = 141 (54.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 44/127 (34%), Positives = 63/127 (49%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+L+D++ R + I I + +E E G+ F
Sbjct: 392 IMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHI-GAYHVETENGMITF------------ 438
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
+DTPGHA F R D V+L++ A +G MPQT + A K G P++V VN
Sbjct: 439 ---LDTPGHAAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIQHA-KAGNVPLIVAVN 494
Query: 1046 KIDRSNA 1052
K+D+ A
Sbjct: 495 KMDKPEA 501
>UNIPROTKB|P0A705 [details] [associations]
symbol:infB species:83333 "Escherichia coli K-12"
[GO:0003743 "translation initiation factor activity"
evidence=IEA;IDA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0097216 "guanosine tetraphosphate binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043024 "ribosomal
small subunit binding" evidence=IDA] [GO:0006184 "GTP catabolic
process" evidence=IEA;IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0006412 "translation" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IDA] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006847
InterPro:IPR009061 Pfam:PF00009 Pfam:PF03144 Pfam:PF04760
PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0016020 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003924 EMBL:U18997 GO:GO:0003743
InterPro:IPR009000 SUPFAM:SSF50447 SUPFAM:SSF46955 GO:GO:0043024
PDB:1ZO1 PDBsum:1ZO1 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487
ProtClustDB:PRK05306 HAMAP:MF_00100_B InterPro:IPR013575
Pfam:PF08364 EMBL:X00513 EMBL:AJ002537 EMBL:AJ002538 EMBL:AJ002539
EMBL:AJ002540 EMBL:AJ002541 EMBL:AJ002542 EMBL:AJ002402
EMBL:AJ002403 EMBL:AJ002404 EMBL:AJ002405 EMBL:AJ002406
EMBL:AJ002407 EMBL:AJ002408 EMBL:AJ002409 EMBL:AJ002410
EMBL:AJ002411 EMBL:AJ002412 EMBL:AJ002413 EMBL:AJ132861
EMBL:AJ132862 EMBL:X13775 PIR:D65107 RefSeq:NP_417637.1
RefSeq:YP_491355.1 PDB:1ND9 PDBsum:1ND9 ProteinModelPortal:P0A705
SMR:P0A705 DIP:DIP-36182N IntAct:P0A705 MINT:MINT-1235405
PhosSite:P010442 PRIDE:P0A705 EnsemblBacteria:EBESCT00000003504
EnsemblBacteria:EBESCT00000003505 EnsemblBacteria:EBESCT00000003506
EnsemblBacteria:EBESCT00000003507 EnsemblBacteria:EBESCT00000017279
GeneID:12933442 GeneID:947684 KEGG:ecj:Y75_p3090 KEGG:eco:b3168
PATRIC:32121754 EchoBASE:EB0500 EcoGene:EG10505 OMA:NILGIAE
BioCyc:EcoCyc:EG10505-MONOMER BioCyc:ECOL316407:JW3137-MONOMER
EvolutionaryTrace:P0A705 Genevestigator:P0A705 GO:GO:0097216
Uniprot:P0A705
Length = 890
Score = 1502 (533.8 bits), Expect = 5.1e-154, P = 5.1e-154
Identities = 298/539 (55%), Positives = 396/539 (73%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+VK S VIK +MKLG M TINQV+DQETA ++ EEMGH + N+ E ++++ +
Sbjct: 325 MAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTG 384
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
AE RAP+VTIMGHVDHGKTSLLDYIR T V EAGGITQHIGAY+V T +G ITF
Sbjct: 385 AAAEP--RAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITF 442
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AFT+MRARGA+ TDIVVLVVAADDGVMPQT EAI HAK + VP++VA+NKIDK
Sbjct: 443 LDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDK 502
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ + DR+K +L ++PEE+GG S F+ +SAK G GI++LL+ I LQAE+LELKA
Sbjct: 503 PEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRK 562
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
A G +IES LDKG+GPVATVL++ GTL DIV+ G YGR+R+M NE G+ +LEAGP
Sbjct: 563 GMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGP 622
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +G+E+ V+ +EKKARE+ L+RQGKFR+VKL++Q+ K ENMF ++
Sbjct: 623 SIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMT 682
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ +V + I++K DV GS E +++SL LSTD+VK+++I + VG I E+D LA AS AI
Sbjct: 683 EGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAI 742
Query: 421 IIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQ 480
++GFNVRADAS RK+ + E+K+ ++ ++ E K+ ++GLAE+R
Sbjct: 743 LVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRD 802
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V K IAGC + EG+++R + IR+LR+ +I+ GEL+SL+RFKD+V EV+ G EC
Sbjct: 803 VFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMEC 861
Score = 142 (55.0 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 46/132 (34%), Positives = 64/132 (48%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+L+D++ + I I + +E E G+ F
Sbjct: 396 IMGHVDHGKTSLLDYIRSTKVASGEAGGITQHI-GAYHVETENGMITF------------ 442
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
+DTPGHA F R D V+L++ A +G MPQT + A K P+VV VN
Sbjct: 443 ---LDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHA-KAAQVPVVVAVN 498
Query: 1046 KIDRSNARPEWV 1057
KID+ A P+ V
Sbjct: 499 KIDKPEADPDRV 510
>UNIPROTKB|Q9KU80 [details] [associations]
symbol:infB "Translation initiation factor IF-2"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR000178 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006847 InterPro:IPR009061
Pfam:PF00009 Pfam:PF03144 Pfam:PF04760 PROSITE:PS01176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0003743
InterPro:IPR009000 SUPFAM:SSF50447 SUPFAM:SSF46955 eggNOG:COG0532
KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 TIGRFAMs:TIGR00487 ProtClustDB:PRK05306
HAMAP:MF_00100_B InterPro:IPR013575 Pfam:PF08364 OMA:NILGIAE
PIR:A82298 RefSeq:NP_230292.1 ProteinModelPortal:Q9KU80
DNASU:2615433 GeneID:2615433 KEGG:vch:VC0643 PATRIC:20080399
Uniprot:Q9KU80
Length = 898
Score = 1499 (532.7 bits), Expect = 1.1e-153, P = 1.1e-153
Identities = 303/539 (56%), Positives = 393/539 (72%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK +MK+G M TINQV+DQETA ++ EEMGH K N+ E +L++ +
Sbjct: 333 MSVKATEVIKVMMKMGAMATINQVIDQETAQLVAEEMGHKVVLRKENELEEAILSDRDDK 392
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E + RAP+VTIMGHVDHGKTS LDYIR+T+V EAGGITQHIGAY+V T +G ITF
Sbjct: 393 F--EEVSRAPVVTIMGHVDHGKTSTLDYIRRTHVASGEAGGITQHIGAYHVETPNGMITF 450
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AFTAMRARGA+ TDIVVLVVAADDGVMPQT EAI HAK +GVPLIVA+NKIDK
Sbjct: 451 LDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDK 510
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N D +K +L V+PEE+GG + F+ ISAK G I+ LLE I LQAE+LELKA
Sbjct: 511 DTANPDNVKTELSQYNVMPEEWGGDNMFVHISAKQGTNIDGLLEAILLQAEVLELKAVKQ 570
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
A GV+IESRLDKG+GPVATVL+QSGTLR DIV+ G YGR+R+M +E G + EAGP
Sbjct: 571 GMASGVVIESRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGP 630
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +G+E V+ +E+KARE+ +R GKFR+VKL++Q+ K ENMF+++
Sbjct: 631 SIPVEILGLSGVPAAGDEATVVRDERKAREVANYRAGKFREVKLARQQKSKLENMFSNMT 690
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
V L I++K DV GS E + +SL LSTD+VK+ ++ + VG I E+D LA AS AI
Sbjct: 691 AGDVAELNIVLKADVQGSVEAIADSLTKLSTDEVKVNIVGSGVGGITETDAVLAAASNAI 750
Query: 421 IIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQ 480
++GFNVRADAS R++ + E+K ++ ++ E K+ ++GLAE+R
Sbjct: 751 VVGFNVRADASARRMIEAENIDLRYYSIIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRD 810
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V K+ IAGC + EG+I+R++ IR+LR+ +I+ GEL+SL+RFKD+V EVK G+EC
Sbjct: 811 VFKSPKLGAIAGCMVTEGVIKRNAPIRVLRDNVVIYEGELESLRRFKDDVAEVKNGYEC 869
Score = 144 (55.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/129 (33%), Positives = 60/129 (46%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+ +D++ R + I I + +E G+ F
Sbjct: 404 IMGHVDHGKTSTLDYIRRTHVASGEAGGITQHI-GAYHVETPNGMITF------------ 450
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGHA F R D V+L++ A +G MPQT + A G IV VNK
Sbjct: 451 ---LDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNK 507
Query: 1047 IDRSNARPE 1055
ID+ A P+
Sbjct: 508 IDKDTANPD 516
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 1339 NYRGGDLKNIEINEKERVRLE 1359
NYR G + +++ +++ +LE
Sbjct: 663 NYRAGKFREVKLARQQKSKLE 683
>TIGR_CMR|VC_0643 [details] [associations]
symbol:VC_0643 "initiation factor IF-2" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006847
InterPro:IPR009061 Pfam:PF00009 Pfam:PF03144 Pfam:PF04760
PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006184
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 SUPFAM:SSF46955
eggNOG:COG0532 KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 TIGRFAMs:TIGR00487 ProtClustDB:PRK05306
HAMAP:MF_00100_B InterPro:IPR013575 Pfam:PF08364 OMA:NILGIAE
PIR:A82298 RefSeq:NP_230292.1 ProteinModelPortal:Q9KU80
DNASU:2615433 GeneID:2615433 KEGG:vch:VC0643 PATRIC:20080399
Uniprot:Q9KU80
Length = 898
Score = 1499 (532.7 bits), Expect = 1.1e-153, P = 1.1e-153
Identities = 303/539 (56%), Positives = 393/539 (72%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK +MK+G M TINQV+DQETA ++ EEMGH K N+ E +L++ +
Sbjct: 333 MSVKATEVIKVMMKMGAMATINQVIDQETAQLVAEEMGHKVVLRKENELEEAILSDRDDK 392
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
E + RAP+VTIMGHVDHGKTS LDYIR+T+V EAGGITQHIGAY+V T +G ITF
Sbjct: 393 F--EEVSRAPVVTIMGHVDHGKTSTLDYIRRTHVASGEAGGITQHIGAYHVETPNGMITF 450
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AFTAMRARGA+ TDIVVLVVAADDGVMPQT EAI HAK +GVPLIVA+NKIDK
Sbjct: 451 LDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDK 510
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N D +K +L V+PEE+GG + F+ ISAK G I+ LLE I LQAE+LELKA
Sbjct: 511 DTANPDNVKTELSQYNVMPEEWGGDNMFVHISAKQGTNIDGLLEAILLQAEVLELKAVKQ 570
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
A GV+IESRLDKG+GPVATVL+QSGTLR DIV+ G YGR+R+M +E G + EAGP
Sbjct: 571 GMASGVVIESRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGP 630
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP +G+E V+ +E+KARE+ +R GKFR+VKL++Q+ K ENMF+++
Sbjct: 631 SIPVEILGLSGVPAAGDEATVVRDERKAREVANYRAGKFREVKLARQQKSKLENMFSNMT 690
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
V L I++K DV GS E + +SL LSTD+VK+ ++ + VG I E+D LA AS AI
Sbjct: 691 AGDVAELNIVLKADVQGSVEAIADSLTKLSTDEVKVNIVGSGVGGITETDAVLAAASNAI 750
Query: 421 IIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQ 480
++GFNVRADAS R++ + E+K ++ ++ E K+ ++GLAE+R
Sbjct: 751 VVGFNVRADASARRMIEAENIDLRYYSIIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRD 810
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V K+ IAGC + EG+I+R++ IR+LR+ +I+ GEL+SL+RFKD+V EVK G+EC
Sbjct: 811 VFKSPKLGAIAGCMVTEGVIKRNAPIRVLRDNVVIYEGELESLRRFKDDVAEVKNGYEC 869
Score = 144 (55.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/129 (33%), Positives = 60/129 (46%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+ +D++ R + I I + +E G+ F
Sbjct: 404 IMGHVDHGKTSTLDYIRRTHVASGEAGGITQHI-GAYHVETPNGMITF------------ 450
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGHA F R D V+L++ A +G MPQT + A G IV VNK
Sbjct: 451 ---LDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNK 507
Query: 1047 IDRSNARPE 1055
ID+ A P+
Sbjct: 508 IDKDTANPD 516
Score = 43 (20.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 1339 NYRGGDLKNIEINEKERVRLE 1359
NYR G + +++ +++ +LE
Sbjct: 663 NYRAGKFREVKLARQQKSKLE 683
>UNIPROTKB|Q721A3 [details] [associations]
symbol:typA "GTP-binding protein TypA" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006298
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0005622 EMBL:AE017262
GenomeReviews:AE017262_GR Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG1217 HOGENOM:HOG000282351 KO:K06207 OMA:GWVRMEF
PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394 RefSeq:YP_013684.1
ProteinModelPortal:Q721A3 STRING:Q721A3 GeneID:2799462
KEGG:lmf:LMOf2365_1084 PATRIC:20323402 ProtClustDB:CLSK2461549
Uniprot:Q721A3
Length = 612
Score = 1494 (531.0 bits), Expect = 3.6e-153, P = 3.6e-153
Identities = 293/599 (48%), Positives = 424/599 (70%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LLRQSGTFR N+ + R MD+N++E+ERGITI +KN +I+Y T
Sbjct: 11 AIIAHVDHGKTTLVDQLLRQSGTFRDNETVAERAMDNNDLERERGITILAKNTAIKYEDT 70
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
R+NI+DTPGHADFGGEVERI+ MVD VLL++DA EG MPQTRFV +KAL+ PIVVVN
Sbjct: 71 RVNIMDTPGHADFGGEVERIMKMVDGVLLVVDAYEGTMPQTRFVLKKALEQNLTPIVVVN 130
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSK-ARQGN-MIPL 1103
KIDR ARPE VVD +LF +L A ++QL+FPV+Y SA++G ++ +S A Q M PL
Sbjct: 131 KIDRDFARPEEVVDEVLELFIELGANDDQLEFPVVYASAINGTSSYDSDPAEQKETMKPL 190
Query: 1104 FEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK 1163
+ I++++P DNS+ PLQ Q+ L+Y+ Y+G+IGIGR+ G + Q V ++ D
Sbjct: 191 LDTIIEHIPAPVDNSDEPLQFQVSLLDYNDYVGRIGIGRVFRGTMHVGQTVALIK-LDGT 249
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
+ ++ ++ F GL R + EA +GD+V + G+E+I +G T+ LP+L IDEP
Sbjct: 250 VKQFRVTKMFGFFGLKRDEIKEAKAGDLVALAGMEDIFVGETVTPFDHQEALPLLRIDEP 309
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
TL + F+ NNSP AGREGK +T+R+I+ RL E++ ++ LRV D+ + VSGRGEL
Sbjct: 310 TLQMTFVTNNSPFAGREGKHVTSRKIEERLLAELQTDVSLRVEPTASPDA-WVVSGRGEL 368
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGG 1343
HL+ILIE MRREGYEL VS+P VI + ++G EP E++ +D E G +++ ++ R G
Sbjct: 369 HLSILIETMRREGYELQVSKPEVIIREIDGVKCEPVEDVQIDTPEEFMGSVIESISQRKG 428
Query: 1344 DLKNIEINEKE-RVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
++KN+ IN+ +VRL++ +P+RGLIG+ +F+++TRG G+I+H F+ Y P K + +
Sbjct: 429 EMKNM-INDGNGQVRLQFMVPARGLIGYTTDFLSMTRGYGIINHTFDSYQPI-QKGR--V 484
Query: 1403 GKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKE 1462
G R GVL+S +GK+ Y +++DRG +FI +YEGMI+G ++R+ D+ VN +K
Sbjct: 485 GGRSRGVLVSMETGKSTTYGTMQVEDRGTIFIEPGTDIYEGMIVGENNREGDIAVNIVKA 544
Query: 1463 KQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQ+TNIRS+ D+ + P ++LE ++EF+N+DE E+TP++IRLRK+ L +NER+K
Sbjct: 545 KQMTNIRSANKDQTNVIKKPRHLSLEESLEFLNEDEYCEVTPESIRLRKKILNKNEREK 603
Score = 147 (56.8 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 43/125 (34%), Positives = 60/125 (48%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
V I+ HVDHGKT+L+D + + + F + + + N + IT L
Sbjct: 10 VAIIAHVDHGKTTLVDQLLRQSGTFRDNETVAERAMDNNDLERERGITILAKNTAIKYED 69
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R K+ D V+LVV A +G MPQTR + A + IV +
Sbjct: 70 TRVNIMDTPGHADFGGEVERIMKMVDGVLLVVDAYEGTMPQTRFVLKKALEQNLTPIVVV 129
Query: 176 NKIDK 180
NKID+
Sbjct: 130 NKIDR 134
Score = 37 (18.1 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 9/14 (64%), Positives = 10/14 (71%)
Query: 523 LKRFKDNVKEVKAG 536
LKR D +KE KAG
Sbjct: 264 LKR--DEIKEAKAG 275
>UNIPROTKB|Q2GKP7 [details] [associations]
symbol:typA "GTP-binding protein TypA" species:212042
"Anaplasma phagocytophilum HZ" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG1217
HOGENOM:HOG000282351 KO:K06207 PANTHER:PTHR23115:SF14
TIGRFAMs:TIGR01394 OMA:GPLAQTK ProtClustDB:CLSK749496
RefSeq:YP_505054.1 ProteinModelPortal:Q2GKP7 STRING:Q2GKP7
GeneID:3931210 KEGG:aph:APH_0451 PATRIC:20949524
BioCyc:APHA212042:GHPM-478-MONOMER Uniprot:Q2GKP7
Length = 612
Score = 1492 (530.3 bits), Expect = 5.8e-153, P = 5.8e-153
Identities = 294/596 (49%), Positives = 412/596 (69%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D +LRQSG FR NQ++ R+MDSN++E+ERGITI +K +I +
Sbjct: 12 AIVAHVDHGKTTLLDSMLRQSGAFRDNQDVVDRVMDSNDLERERGITILAKCTAITWKNH 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+IN+IDTPGHADFGGEVER+LSM D VLLL+DA EGPMPQT+FV KALK PIVVVN
Sbjct: 72 KINVIDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKALKAKLLPIVVVN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ++R V+D ++LF L AT EQLDFPV+Y S G+ +++ + + PLFE
Sbjct: 132 KVDRPDSRVSEVLDEVYELFINLDATSEQLDFPVLYASGREGWCSKSLTDEKKGLEPLFE 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL+++ + + N P + + LE +LG++ G++ GR K V ++N +
Sbjct: 192 GILEHIKPKQYDLNAPFSMLLTLLESDKFLGRVLTGKVYGGRAKINSQVKVLNLAGEVVE 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ ++ F GL RV V EA +GDI+ + G+E + +I D S + +D PT+
Sbjct: 252 SGRLTKLLSFSGLKRVPVEEADAGDIIAVAGLERASVSDSIVDVSVTVPIESTPVDPPTM 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ VN+SP+AG EG +T+ IK RL E + N+ + V + ++ YEV GRGEL L
Sbjct: 312 AVTIGVNDSPIAGTEGTKLTSTAIKQRLLSEAETNVAITVKEGARSEA-YEVGGRGELQL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+LIE MRREG+ELSVSRPRVIFK + EP E + +D++E G+IM+KL++R GD+
Sbjct: 371 GVLIETMRREGFELSVSRPRVIFKKEGSTILEPIEEVIIDVDEEYSGVIMEKLSFRKGDM 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVR+ + +PSRGLIG+ EF+T +RGTG+++ +F YAP K ++ R
Sbjct: 431 QDMTPSGKGRVRMVFLMPSRGLIGYHGEFLTDSRGTGIMNRLFHGYAPH----KGEISGR 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS G+AVAY+++ LQDRG +FI D VY GMI+G+H+R+ND+ VN +K KQL
Sbjct: 487 MNGVLISTGQGEAVAYAIFNLQDRGMMFIKPQDKVYMGMIVGLHNRNNDIEVNVLKGKQL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R++GSDEA++L+ P ++LE I FINDDELVE TPK+IRLRKRFL NERK+
Sbjct: 547 TNVRAAGSDEAVRLVPPKMMSLEEMIGFINDDELVECTPKSIRLRKRFLDPNERKR 602
Score = 163 (62.4 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 75/259 (28%), Positives = 119/259 (45%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVT--N 114
+ I+ HVDHGKT+LLD + + + F + + + N +T N
Sbjct: 11 LAIVAHVDHGKTTLLDSMLRQSGAFRDNQDVVDRVMDSNDLERERGITILAKCTAITWKN 70
Query: 115 HGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHA-KISGVPLIV 173
H I +DTPGH F R + D V+L+V A +G MPQT+ ++ A K +P++V
Sbjct: 71 H-KINVIDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKALKAKLLPIVV 129
Query: 174 AINKIDKLDIN----LDRIKQ-----DLISEQV-IPEEYG-GASPFISIS-AKTGVGINK 221
+NK+D+ D LD + + D SEQ+ P Y G + S S G+
Sbjct: 130 -VNKVDRPDSRVSEVLDEVYELFINLDATSEQLDFPVLYASGREGWCSKSLTDEKKGLEP 188
Query: 222 LLENI--SLQAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIV---- 275
L E I ++ + +L AP + ++ES DK G V T + G + + V
Sbjct: 189 LFEGILEHIKPKQYDLNAPFSMLL--TLLES--DKFLGRVLTGKVYGGRAKINSQVKVLN 244
Query: 276 VAG--ASYGRIRSMLNENG 292
+AG GR+ +L+ +G
Sbjct: 245 LAGEVVESGRLTKLLSFSG 263
>TIGR_CMR|APH_0451 [details] [associations]
symbol:APH_0451 "GTP-binding protein TypA" species:212042
"Anaplasma phagocytophilum HZ" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
EMBL:CP000235 GenomeReviews:CP000235_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG1217 HOGENOM:HOG000282351 KO:K06207
PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394 OMA:GPLAQTK
ProtClustDB:CLSK749496 RefSeq:YP_505054.1 ProteinModelPortal:Q2GKP7
STRING:Q2GKP7 GeneID:3931210 KEGG:aph:APH_0451 PATRIC:20949524
BioCyc:APHA212042:GHPM-478-MONOMER Uniprot:Q2GKP7
Length = 612
Score = 1492 (530.3 bits), Expect = 5.8e-153, P = 5.8e-153
Identities = 294/596 (49%), Positives = 412/596 (69%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D +LRQSG FR NQ++ R+MDSN++E+ERGITI +K +I +
Sbjct: 12 AIVAHVDHGKTTLLDSMLRQSGAFRDNQDVVDRVMDSNDLERERGITILAKCTAITWKNH 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+IN+IDTPGHADFGGEVER+LSM D VLLL+DA EGPMPQT+FV KALK PIVVVN
Sbjct: 72 KINVIDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKALKAKLLPIVVVN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR ++R V+D ++LF L AT EQLDFPV+Y S G+ +++ + + PLFE
Sbjct: 132 KVDRPDSRVSEVLDEVYELFINLDATSEQLDFPVLYASGREGWCSKSLTDEKKGLEPLFE 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL+++ + + N P + + LE +LG++ G++ GR K V ++N +
Sbjct: 192 GILEHIKPKQYDLNAPFSMLLTLLESDKFLGRVLTGKVYGGRAKINSQVKVLNLAGEVVE 251
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ ++ F GL RV V EA +GDI+ + G+E + +I D S + +D PT+
Sbjct: 252 SGRLTKLLSFSGLKRVPVEEADAGDIIAVAGLERASVSDSIVDVSVTVPIESTPVDPPTM 311
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ VN+SP+AG EG +T+ IK RL E + N+ + V + ++ YEV GRGEL L
Sbjct: 312 AVTIGVNDSPIAGTEGTKLTSTAIKQRLLSEAETNVAITVKEGARSEA-YEVGGRGELQL 370
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+LIE MRREG+ELSVSRPRVIFK + EP E + +D++E G+IM+KL++R GD+
Sbjct: 371 GVLIETMRREGFELSVSRPRVIFKKEGSTILEPIEEVIIDVDEEYSGVIMEKLSFRKGDM 430
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
+++ + K RVR+ + +PSRGLIG+ EF+T +RGTG+++ +F YAP K ++ R
Sbjct: 431 QDMTPSGKGRVRMVFLMPSRGLIGYHGEFLTDSRGTGIMNRLFHGYAPH----KGEISGR 486
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
NGVLIS G+AVAY+++ LQDRG +FI D VY GMI+G+H+R+ND+ VN +K KQL
Sbjct: 487 MNGVLISTGQGEAVAYAIFNLQDRGMMFIKPQDKVYMGMIVGLHNRNNDIEVNVLKGKQL 546
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
TN+R++GSDEA++L+ P ++LE I FINDDELVE TPK+IRLRKRFL NERK+
Sbjct: 547 TNVRAAGSDEAVRLVPPKMMSLEEMIGFINDDELVECTPKSIRLRKRFLDPNERKR 602
Score = 163 (62.4 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 75/259 (28%), Positives = 119/259 (45%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------------VVT--N 114
+ I+ HVDHGKT+LLD + + + F + + + N +T N
Sbjct: 11 LAIVAHVDHGKTTLLDSMLRQSGAFRDNQDVVDRVMDSNDLERERGITILAKCTAITWKN 70
Query: 115 HGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHA-KISGVPLIV 173
H I +DTPGH F R + D V+L+V A +G MPQT+ ++ A K +P++V
Sbjct: 71 H-KINVIDTPGHADFGGEVERVLSMADGVLLLVDASEGPMPQTKFVLSKALKAKLLPIVV 129
Query: 174 AINKIDKLDIN----LDRIKQ-----DLISEQV-IPEEYG-GASPFISIS-AKTGVGINK 221
+NK+D+ D LD + + D SEQ+ P Y G + S S G+
Sbjct: 130 -VNKVDRPDSRVSEVLDEVYELFINLDATSEQLDFPVLYASGREGWCSKSLTDEKKGLEP 188
Query: 222 LLENI--SLQAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIV---- 275
L E I ++ + +L AP + ++ES DK G V T + G + + V
Sbjct: 189 LFEGILEHIKPKQYDLNAPFSMLL--TLLES--DKFLGRVLTGKVYGGRAKINSQVKVLN 244
Query: 276 VAG--ASYGRIRSMLNENG 292
+AG GR+ +L+ +G
Sbjct: 245 LAGEVVESGRLTKLLSFSG 263
>TIGR_CMR|CPS_2203 [details] [associations]
symbol:CPS_2203 "translation initiation factor IF-2"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006847 InterPro:IPR009061 Pfam:PF00009 Pfam:PF03144
Pfam:PF04760 PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0003924 GO:GO:0006184 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003743 InterPro:IPR009000
SUPFAM:SSF50447 SUPFAM:SSF46955 eggNOG:COG0532 KO:K02519
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156
TIGRFAMs:TIGR00487 HOGENOM:HOG000076907 ProtClustDB:PRK05306
HAMAP:MF_00100_B RefSeq:YP_268928.1 ProteinModelPortal:Q482T9
STRING:Q482T9 PRIDE:Q482T9 GeneID:3518937 KEGG:cps:CPS_2203
PATRIC:21467521 OMA:MMKLGQM BioCyc:CPSY167879:GI48-2273-MONOMER
InterPro:IPR013575 Pfam:PF08364 Uniprot:Q482T9
Length = 889
Score = 1488 (528.9 bits), Expect = 1.5e-152, P = 1.5e-152
Identities = 295/539 (54%), Positives = 392/539 (72%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MS K + V+K + KLG M TINQV+DQETA ++ E+MG K N E +L + +N
Sbjct: 325 MSKKGAEVVKAMFKLGAMATINQVIDQETAALVAEDMGFEVVLVKENALEEAVLAD--RN 382
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
T E + RAP+VTIMGHVDHGKTSLLD+IR+ V EAGGITQHIGAY+V T HG ITF
Sbjct: 383 DTGEEITRAPVVTIMGHVDHGKTSLLDHIREAKVADGEAGGITQHIGAYHVETGHGMITF 442
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AFTAMR+RGAK TDIVV+VVAADDGVMPQT EAI HA+ S P+I+A+NK+DK
Sbjct: 443 LDTPGHAAFTAMRSRGAKATDIVVIVVAADDGVMPQTIEAIQHAQASEAPIIIAVNKMDK 502
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ DR+K +L V+ EE+GG F +SAKTG+GI++LL++I LQ+E+LEL A V
Sbjct: 503 ESADPDRVKSELSQHGVLSEEWGGEVQFCHVSAKTGLGIDELLDSILLQSEVLELTAVVD 562
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
A GV++ES+LDKG+GPVATVL+Q GTL+ DIV+ G YGR+R+M +ENGK I AGP
Sbjct: 563 KMANGVVVESKLDKGRGPVATVLVQEGTLKQGDIVLCGLEYGRVRAMRDENGKTIQSAGP 622
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
SIPVEI GL+ VP SG+E V+ +EKKARE+ LFRQGKFRDVKL++Q+ K ENMF +
Sbjct: 623 SIPVEIIGLSGVPISGDEATVVKDEKKAREVALFRQGKFRDVKLARQQKAKLENMFASMA 682
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ + + ++IK+DV GS E +++SL LSTD+VK+++I + VG I E+D LA AS AI
Sbjct: 683 EGDISEVNVVIKSDVQGSLEAISDSLLKLSTDEVKVKIIGSGVGAITETDATLAAASNAI 742
Query: 421 IIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQ 480
++GFNVRADAS RK+ + +E+K ++ ++ E K+ ++GLA++R
Sbjct: 743 VVGFNVRADASARKVIESENIDLRYYSVIYALIEEVKQAMSGMLAPEFKQEIIGLAQVRD 802
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V K+ IAGC + EG+I+R + IR+LR +I+ GEL+SL+RFKD+V+EV+ G EC
Sbjct: 803 VFKSPKIGAIAGCMVTEGVIKRSAPIRVLRENVVIYEGELESLRRFKDDVQEVRNGTEC 861
Score = 147 (56.8 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 45/132 (34%), Positives = 68/132 (51%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+L+DH+ R+ A++ D + GIT +E
Sbjct: 396 IMGHVDHGKTSLLDHI-RE-----------AKVADG----EAGGITQHIGAYHVETGHGM 439
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
I +DTPGHA F R D V++++ A +G MPQT + A + PI++ VN
Sbjct: 440 ITFLDTPGHAAFTAMRSRGAKATDIVVIVVAADDGVMPQTIEAIQHA-QASEAPIIIAVN 498
Query: 1046 KIDRSNARPEWV 1057
K+D+ +A P+ V
Sbjct: 499 KMDKESADPDRV 510
>UNIPROTKB|Q0C599 [details] [associations]
symbol:typA "GTP-binding protein TypA" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 EMBL:CP000158 GenomeReviews:CP000158_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG1217
HOGENOM:HOG000282351 KO:K06207 PANTHER:PTHR23115:SF14
TIGRFAMs:TIGR01394 OMA:GPLAQTK RefSeq:YP_759094.1
ProteinModelPortal:Q0C599 STRING:Q0C599 GeneID:4287227
KEGG:hne:HNE_0364 PATRIC:32213520 ProtClustDB:CLSK2531800
BioCyc:HNEP228405:GI69-408-MONOMER Uniprot:Q0C599
Length = 610
Score = 1486 (528.2 bits), Expect = 2.5e-152, P = 2.5e-152
Identities = 296/598 (49%), Positives = 419/598 (70%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSGTFR N+ R+MDSN++EKERGITI +K S+E+NG
Sbjct: 12 AIIAHVDHGKTTLVDELLKQSGTFRANEKTAERMMDSNDLEKERGITILAKTTSVEWNGY 71
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
RINI+DTPGHADFGGEVERIL MVD V++L+D+ EGPMPQT+FV KALKLG +PIV +N
Sbjct: 72 RINIVDTPGHADFGGEVERILDMVDGVIVLVDSAEGPMPQTKFVVSKALKLGLRPIVAIN 131
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KID++ R + V++ FDLF L AT+EQLDFPV+Y S G+ + + + NM LF+
Sbjct: 132 KIDKAERRVDEVLNEVFDLFANLDATDEQLDFPVLYGSGKMGWMSTQYEEVRPNMDELFQ 191
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
++ +VP K + P + ++ +LG+I GRILSG IK Q + ++
Sbjct: 192 LVVDHVPTPKV-AEGPFRFLATTISADPFLGRILTGRILSGSIKPNQSIKVLARDGQLVE 250
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
+ +I+++ F+GL+RV V+EA +GDIV + G+ + + T CDPS L ID PT+
Sbjct: 251 QGRISKVLAFRGLERVPVDEASAGDIVSLAGMTKANVADTFCDPSVTEPLAAQPIDPPTI 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++ F VN+SPLAG EG +T+R I +RL E + N+ L+V + D + VSGRGEL L
Sbjct: 311 SMTFRVNDSPLAGTEGTKVTSRLIWDRLLKEAEGNVALKVDRAT-DAEAFTVSGRGELQL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKT-LNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
++LIE MRREG+EL V+RP+V+ + NGE EP E + +D+++ + GI++QK+N R +
Sbjct: 370 SVLIETMRREGFELGVARPQVLMQEGPNGEKLEPIEEVIIDVDDDHSGIVVQKMNERKAE 429
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+ ++ + R RL + P+RGLIG+Q E ++ TRGT +++ +F EY P +K K G
Sbjct: 430 MLDMRPSGVGRTRLVFHAPTRGLIGYQGELLSDTRGTAIMNRIFHEYLP--HKGKIQ-G- 485
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R GVLI+ G+AVA++LW L+DRG + I+ D VY GMI+G H+RDNDL VN +K K+
Sbjct: 486 RHTGVLIAMEQGEAVAFALWNLEDRGPMMIHPGDKVYGGMIVGEHNRDNDLEVNVLKGKK 545
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
LTN+R+SG+DEA++L P+ +TLE ++ +I DDELVE+TPKNIRLRK +L N+RK++
Sbjct: 546 LTNMRASGTDEAVRLTPPLMMTLEKSLAYIADDELVEVTPKNIRLRKIWLDPNDRKRR 603
Score = 156 (60.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVF----------------SEAGGITQHIGAYNVVTNH 115
+ I+ HVDHGKT+L+D + K + F + GIT +V N
Sbjct: 11 IAIIAHVDHGKTTLVDELLKQSGTFRANEKTAERMMDSNDLEKERGITILAKTTSVEWNG 70
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH F R + D V+++V + +G MPQT+ ++ A G+ IVAI
Sbjct: 71 YRINIVDTPGHADFGGEVERILDMVDGVIVLVDSAEGPMPQTKFVVSKALKLGLRPIVAI 130
Query: 176 NKIDKLDINLDRIKQDL 192
NKIDK + +D + ++
Sbjct: 131 NKIDKAERRVDEVLNEV 147
>TIGR_CMR|CBU_1432 [details] [associations]
symbol:CBU_1432 "translation initiation factor IF-2"
species:227377 "Coxiella burnetii RSA 493" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006847 InterPro:IPR009061 Pfam:PF00009 Pfam:PF03144
Pfam:PF04760 PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0003924 GO:GO:0006184 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003743 InterPro:IPR009000
SUPFAM:SSF50447 SUPFAM:SSF46955 eggNOG:COG0532 KO:K02519
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156
TIGRFAMs:TIGR00487 HOGENOM:HOG000076907 ProtClustDB:PRK05306
HAMAP:MF_00100_B InterPro:IPR013575 Pfam:PF08364 RefSeq:NP_820415.1
ProteinModelPortal:Q83BS1 PRIDE:Q83BS1 GeneID:1209338
KEGG:cbu:CBU_1432 PATRIC:17931615 OMA:PEAWGGT
BioCyc:CBUR227377:GJ7S-1419-MONOMER Uniprot:Q83BS1
Length = 803
Score = 1479 (525.7 bits), Expect = 1.4e-151, P = 1.4e-151
Identities = 298/539 (55%), Positives = 395/539 (73%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
MSVK++ VIK +MKLG MVTINQ +DQETA I+VEEMGH K + E L+ +
Sbjct: 237 MSVKAAEVIKAMMKLGAMVTINQRIDQETAAIVVEEMGHKPKLIKEDVLEENLVATLGEQ 296
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
T E++ RAP+VTIMGHVDHGKTSLLDYIR+T V +EAGGITQHIGAY+V T G ITF
Sbjct: 297 -TGEAVPRAPVVTIMGHVDHGKTSLLDYIRRTKVTSTEAGGITQHIGAYHVETELGMITF 355
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAFTAMRARGAK TDIVVLVVAADDGVMPQT EAI HA+ + VP++VA+NKIDK
Sbjct: 356 LDTPGHEAFTAMRARGAKCTDIVVLVVAADDGVMPQTVEAIQHARAAKVPVVVAVNKIDK 415
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ + +RIK +L + V+PEE+GG + F ISAKTG GI+ LLE I LQAE+LELKA
Sbjct: 416 PEADPERIKTELSTHDVLPEEWGGDTMFQPISAKTGEGIDALLERILLQAEVLELKAVDN 475
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+G+++ESRLD+G+GPVATVL+ SG L DI++ G YGR+R+M+ ++G+ AGP
Sbjct: 476 GPARGMVVESRLDRGRGPVATVLVTSGELHLGDILLVGREYGRVRAMIGDDGRPCESAGP 535
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
S+PVE+ GL+ +GEE V+ +E+KAREI FRQGK+R+V+L+K++ E +F+ +
Sbjct: 536 SMPVEVLGLSGTSVAGEEAIVVPDERKAREIARFRQGKYREVRLAKKQTAHLERIFDRMG 595
Query: 361 KEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAI 420
+ K L I++K DV GS E LTE+L LSTD+VK+ +I + VG I ESD+NLAIAS A+
Sbjct: 596 EGKQNTLNIVLKADVQGSLEALTEALNKLSTDEVKVNIIASGVGGITESDVNLAIASDAV 655
Query: 421 IIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQ 480
+IGFNVRADA TR L + E+K ++ L+ E +E ++GLAE+R
Sbjct: 656 VIGFNVRADAPTRVLVEREGVDLRYYSIIYDLIDEVKKALSGLLAPEFEEKIVGLAEVRD 715
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
V +K+ IAGC ++EG++RR IR+LR+ +I+ G+L+SL+R+K++V EV+ G EC
Sbjct: 716 VFRSSKIGAIAGCMVVEGVVRRHLPIRVLRDNVVIYEGQLESLRRYKEDVAEVRQGTEC 774
Score = 147 (56.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 44/129 (34%), Positives = 61/129 (47%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+L+D++ R T + I I + +E E G+ F
Sbjct: 309 IMGHVDHGKTSLLDYIRRTKVTSTEAGGITQHI-GAYHVETELGMITF------------ 355
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+DTPGH F R D V+L++ A +G MPQT + A +V VNK
Sbjct: 356 ---LDTPGHEAFTAMRARGAKCTDIVVLVVAADDGVMPQTVEAIQHARAAKVPVVVAVNK 412
Query: 1047 IDRSNARPE 1055
ID+ A PE
Sbjct: 413 IDKPEADPE 421
Score = 56 (24.8 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 37/162 (22%), Positives = 73/162 (45%)
Query: 1139 GIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKG---LDRVLVN--EALSGDIVL 1193
GI +L RI +V+ + D+ P + + + R+ +G + VLV E GDI+L
Sbjct: 453 GIDALLE-RILLQAEVLELKAVDNGPARGMVVESRLDRGRGPVATVLVTSGELHLGDILL 511
Query: 1194 ITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFM-VNNSPLAGREGKFITT-RQIKN 1251
+ G E + + I D +P P++ + + ++ + +AG E + R+ +
Sbjct: 512 V-GREYGRVRAMIGDDGRP-----CESAGPSMPVEVLGLSGTSVAGEEAIVVPDERKARE 565
Query: 1252 --RLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH-LTILIE 1290
R + L Q H + I++ G G+ + L I+++
Sbjct: 566 IARFRQGKYREVRLAKKQTAHLERIFDRMGEGKQNTLNIVLK 607
>TIGR_CMR|DET_1298 [details] [associations]
symbol:DET_1298 "GTP-binding protein TypA" species:243164
"Dehalococcoides ethenogenes 195" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG1217 HOGENOM:HOG000282351 KO:K06207
OMA:GWVRMEF PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394
RefSeq:YP_182010.1 ProteinModelPortal:Q3Z6Y9 STRING:Q3Z6Y9
GeneID:3229363 KEGG:det:DET1298 PATRIC:21609627
ProtClustDB:CLSK836968 BioCyc:DETH243164:GJNF-1299-MONOMER
Uniprot:Q3Z6Y9
Length = 609
Score = 1469 (522.2 bits), Expect = 1.6e-150, P = 1.6e-150
Identities = 296/602 (49%), Positives = 413/602 (68%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKT+L+D +L+QS FR+NQ++ IMD N +E+E+GITI +KN +I Y G
Sbjct: 13 AIIAHVDHGKTSLVDVMLKQSRIFRENQHVGELIMDRNTLEREKGITILAKNTAITYRGV 72
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+INIIDTPGHADF GEVER+L+M D LL+ID+++GPMPQTRFV ++A++ KPIVV+N
Sbjct: 73 KINIIDTPGHADFSGEVERVLNMADGCLLVIDSIDGPMPQTRFVLKEAMQKKLKPIVVIN 132
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR NARPE V+ DLF +L TEEQLDFPV+YTSA GYA + ++IPLFE
Sbjct: 133 KIDRENARPEIVLGLVQDLFLELATTEEQLDFPVVYTSAREGYAVNTPGTKSTDLIPLFE 192
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
IL +P + Q+ I +L+Y ++ G+I IGRI G+I S D V+ +K +
Sbjct: 193 CILDKIPP-PSIAQGEFQMLISNLDYDTHKGRIAIGRIQRGKICS-HDRVVNIDSQNKAH 250
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++ Q+ F GL + V A +G+IV ITG+E IG T+ P +P LP + I EPT+
Sbjct: 251 PFEVGQVFTFMGLGKQEVECAEAGEIVAITGLENASIGDTVTSPLQPEALPRIEIGEPTV 310
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+ F VN SP GREGKF T+RQ++ RL E++ NIGLRV + DS + +SGRGELHL
Sbjct: 311 RMTFGVNTSPFGGREGKFCTSRQLRERLFRELETNIGLRVEETDSPDS-FLISGRGELHL 369
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
+IL+E MRREGYE +S+P I K +NG++YEP E L +D+ E G + + L R +
Sbjct: 370 SILVETMRREGYEFEISKPEAITKDINGKVYEPVETLTIDVREDFVGEVTELLGKRQARM 429
Query: 1346 KNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
++ + + VRLEY IP+RGLIGF+N F+T TRGTG+++ F ++ P+ ++ +
Sbjct: 430 TDMHNDGEGNVRLEYNIPTRGLIGFRNSFLTATRGTGVLNSQFLDFQPWCG----EIEQS 485
Query: 1406 RNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQL 1465
R G L++ +G + Y L Q+RG L I+ N VYEGMI+G+H+R DL VN K+K++
Sbjct: 486 RTGALVAAEAGLSCTYGLNNSQERGILMIDANVPVYEGMIVGLHARGLDLAVNVCKQKKM 545
Query: 1466 TNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKKLHK 1525
TNIRSS SD AI+L+ P+K++LE +++FI +DELVE+TPK+IRLRK+ L + E + + K
Sbjct: 546 TNIRSSTSDIAIKLVPPMKLSLEQSMDFIAEDELVEVTPKSIRLRKKIL-DTEMRLRARK 604
Query: 1526 FT 1527
T
Sbjct: 605 RT 606
Score = 194 (73.4 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 81/234 (34%), Positives = 111/234 (47%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSE---AG-------------GITQHIGAYNV-VTN 114
+ I+ HVDHGKTSL+D + K + +F E G GIT I A N +T
Sbjct: 12 IAIIAHVDHGKTSLVDVMLKQSRIFRENQHVGELIMDRNTLEREKGIT--ILAKNTAITY 69
Query: 115 HG-SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
G I +DTPGH F+ R + D +LV+ + DG MPQTR + A + IV
Sbjct: 70 RGVKINIIDTPGHADFSGEVERVLNMADGCLLVIDSIDGPMPQTRFVLKEAMQKKLKPIV 129
Query: 174 AINKIDKLDINLDRIK---QDLISEQVIPEEYGGASPFISISAKTGVGIN----KLLENI 226
INKID+ + + + QDL E EE P + SA+ G +N K + I
Sbjct: 130 VINKIDRENARPEIVLGLVQDLFLELATTEEQLDF-PVVYTSAREGYAVNTPGTKSTDLI 188
Query: 227 SLQAEILELKAPVTTPAKGV--IIESRLDKG--KGPVATVLIQSGTLRCSDIVV 276
L IL+ K P + A+G ++ S LD KG +A IQ G + D VV
Sbjct: 189 PLFECILD-KIPPPSIAQGEFQMLISNLDYDTHKGRIAIGRIQRGKICSHDRVV 241
>UNIPROTKB|Q5LRU3 [details] [associations]
symbol:typA "GTP-binding protein TypA" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HOGENOM:HOG000282351 KO:K06207 PANTHER:PTHR23115:SF14
TIGRFAMs:TIGR01394 OMA:GPLAQTK RefSeq:YP_167262.1
ProteinModelPortal:Q5LRU3 GeneID:3193107 KEGG:sil:SPO2031
PATRIC:23377397 ProtClustDB:CLSK933722 Uniprot:Q5LRU3
Length = 606
Score = 1459 (518.7 bits), Expect = 1.8e-149, P = 1.8e-149
Identities = 286/599 (47%), Positives = 421/599 (70%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSG FR+NQ + R MDSN++E+ERGITI +K S+E+ GT
Sbjct: 7 AIIAHVDHGKTTLVDELLKQSGAFRENQAVAERAMDSNDLERERGITILAKATSVEWRGT 66
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
R+NI+DTPGHADFGGEVERILSMVD V+LL+DA EGPMPQT+FVT KAL LG +PIVV+N
Sbjct: 67 RVNIVDTPGHADFGGEVERILSMVDGVVLLVDAAEGPMPQTKFVTSKALALGLRPIVVLN 126
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+D+ +A P+ +D FDLF L A +EQLDFP +Y S G+A+ + + ++ LFE
Sbjct: 127 KVDKPDAEPDRALDECFDLFANLGANDEQLDFPHLYASGRSGWADTDLDGPRKDLTALFE 186
Query: 1106 AILKYVPVHKD--NSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK 1163
++++VP + P ++ +L ++G+I GR+ SG +K+ + + ++ +
Sbjct: 187 LVVRHVPAPAQIARKDEPFRMLATTLGSDPFIGRILTGRVESGTLKAGETLKALSRDGTQ 246
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
+ ++I F+GL + ++ A +GDIV I G+ + + ++ +P LP ID P
Sbjct: 247 IESFRASKILAFRGLGQQPIDVAEAGDIVTIAGMSKATVADSLVNPQVSEALPAQPIDPP 306
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
T+++ F +N+SPLAGR+GK + +R I++RL E ++N+ +RVT ++ +EV+GRGEL
Sbjct: 307 TISVTFGINDSPLAGRDGKKVQSRVIRDRLMKEAESNVAIRVTDTPGGEA-FEVAGRGEL 365
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY-RG 1342
+ +LIENMRREG+ELS+SRP+V+F+ +G+ EP E + +D+++ G +++K+ R
Sbjct: 366 QMGVLIENMRREGFELSISRPQVLFREEDGQRLEPVEEVTIDVDDEYTGAVIEKVTGPRR 425
Query: 1343 GDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
G+L ++ + R+ +PSRGLIG+ EF+T TRGTG+++ VF + P K +
Sbjct: 426 GELVEMKPAGAGKTRIIAHVPSRGLIGYHGEFLTDTRGTGVLNRVFHGWTPH----KGAI 481
Query: 1403 GKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKE 1462
RR GVLIS +G++VAY+LW L++RGR+FI VYEGMIIG HSRDNDL VNP+K
Sbjct: 482 PGRRAGVLISMENGQSVAYALWNLEERGRMFIGPQTDVYEGMIIGEHSRDNDLEVNPLKG 541
Query: 1463 KQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K+LTN+R+SG+D+A++L I+ +LE AI +I+DDELVE+TP IRLRKR+L +ERK+
Sbjct: 542 KKLTNVRASGTDDAVRLTPHIQFSLEEAIAYIDDDELVEVTPNTIRLRKRYLDPHERKR 600
Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/132 (34%), Positives = 63/132 (47%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + F E + + N + IT L
Sbjct: 6 IAIIAHVDHGKTTLVDELLKQSGAFRENQAVAERAMDSNDLERERGITILAKATSVEWRG 65
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQT+ + A G+ IV +
Sbjct: 66 TRVNIVDTPGHADFGGEVERILSMVDGVVLLVDAAEGPMPQTKFVTSKALALGLRPIVVL 125
Query: 176 NKIDKLDINLDR 187
NK+DK D DR
Sbjct: 126 NKVDKPDAEPDR 137
Score = 127 (49.8 bits), Expect = 0.00043, P = 0.00043
Identities = 54/190 (28%), Positives = 86/190 (45%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A +V + +DTPGH F R + D VVL+V A +G MPQT+
Sbjct: 51 GITILAKATSVEWRGTRVNIVDTPGHADFGGEVERILSMVDGVVLLVDAAEGPMPQTKFV 110
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQ---DLISEQVIPEEYGGASPFISISAKTGV 217
+ A G+ IV +NK+DK D DR DL + +E P + S ++G
Sbjct: 111 TSKALALGLRPIVVLNKVDKPDAEPDRALDECFDLFANLGANDEQLDF-PHLYASGRSGW 169
Query: 218 GINKL---LENISLQAEIL--ELKAPVTTPAKGV---IIESRL--DKGKGPVATVLIQSG 267
L ++++ E++ + AP K ++ + L D G + T ++SG
Sbjct: 170 ADTDLDGPRKDLTALFELVVRHVPAPAQIARKDEPFRMLATTLGSDPFIGRILTGRVESG 229
Query: 268 TLRCSDIVVA 277
TL+ + + A
Sbjct: 230 TLKAGETLKA 239
>TIGR_CMR|SPO_2031 [details] [associations]
symbol:SPO_2031 "GTP-binding protein TypA" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006298
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HOGENOM:HOG000282351 KO:K06207 PANTHER:PTHR23115:SF14
TIGRFAMs:TIGR01394 OMA:GPLAQTK RefSeq:YP_167262.1
ProteinModelPortal:Q5LRU3 GeneID:3193107 KEGG:sil:SPO2031
PATRIC:23377397 ProtClustDB:CLSK933722 Uniprot:Q5LRU3
Length = 606
Score = 1459 (518.7 bits), Expect = 1.8e-149, P = 1.8e-149
Identities = 286/599 (47%), Positives = 421/599 (70%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKTTL+D LL+QSG FR+NQ + R MDSN++E+ERGITI +K S+E+ GT
Sbjct: 7 AIIAHVDHGKTTLVDELLKQSGAFRENQAVAERAMDSNDLERERGITILAKATSVEWRGT 66
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
R+NI+DTPGHADFGGEVERILSMVD V+LL+DA EGPMPQT+FVT KAL LG +PIVV+N
Sbjct: 67 RVNIVDTPGHADFGGEVERILSMVDGVVLLVDAAEGPMPQTKFVTSKALALGLRPIVVLN 126
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+D+ +A P+ +D FDLF L A +EQLDFP +Y S G+A+ + + ++ LFE
Sbjct: 127 KVDKPDAEPDRALDECFDLFANLGANDEQLDFPHLYASGRSGWADTDLDGPRKDLTALFE 186
Query: 1106 AILKYVPVHKD--NSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDK 1163
++++VP + P ++ +L ++G+I GR+ SG +K+ + + ++ +
Sbjct: 187 LVVRHVPAPAQIARKDEPFRMLATTLGSDPFIGRILTGRVESGTLKAGETLKALSRDGTQ 246
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
+ ++I F+GL + ++ A +GDIV I G+ + + ++ +P LP ID P
Sbjct: 247 IESFRASKILAFRGLGQQPIDVAEAGDIVTIAGMSKATVADSLVNPQVSEALPAQPIDPP 306
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
T+++ F +N+SPLAGR+GK + +R I++RL E ++N+ +RVT ++ +EV+GRGEL
Sbjct: 307 TISVTFGINDSPLAGRDGKKVQSRVIRDRLMKEAESNVAIRVTDTPGGEA-FEVAGRGEL 365
Query: 1284 HLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNY-RG 1342
+ +LIENMRREG+ELS+SRP+V+F+ +G+ EP E + +D+++ G +++K+ R
Sbjct: 366 QMGVLIENMRREGFELSISRPQVLFREEDGQRLEPVEEVTIDVDDEYTGAVIEKVTGPRR 425
Query: 1343 GDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
G+L ++ + R+ +PSRGLIG+ EF+T TRGTG+++ VF + P K +
Sbjct: 426 GELVEMKPAGAGKTRIIAHVPSRGLIGYHGEFLTDTRGTGVLNRVFHGWTPH----KGAI 481
Query: 1403 GKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKE 1462
RR GVLIS +G++VAY+LW L++RGR+FI VYEGMIIG HSRDNDL VNP+K
Sbjct: 482 PGRRAGVLISMENGQSVAYALWNLEERGRMFIGPQTDVYEGMIIGEHSRDNDLEVNPLKG 541
Query: 1463 KQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
K+LTN+R+SG+D+A++L I+ +LE AI +I+DDELVE+TP IRLRKR+L +ERK+
Sbjct: 542 KKLTNVRASGTDDAVRLTPHIQFSLEEAIAYIDDDELVEVTPNTIRLRKRYLDPHERKR 600
Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 46/132 (34%), Positives = 63/132 (47%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL---------- 121
+ I+ HVDHGKT+L+D + K + F E + + N + IT L
Sbjct: 6 IAIIAHVDHGKTTLVDELLKQSGAFRENQAVAERAMDSNDLERERGITILAKATSVEWRG 65
Query: 122 ------DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
DTPGH F R + D VVL+V A +G MPQT+ + A G+ IV +
Sbjct: 66 TRVNIVDTPGHADFGGEVERILSMVDGVVLLVDAAEGPMPQTKFVTSKALALGLRPIVVL 125
Query: 176 NKIDKLDINLDR 187
NK+DK D DR
Sbjct: 126 NKVDKPDAEPDR 137
Score = 127 (49.8 bits), Expect = 0.00043, P = 0.00043
Identities = 54/190 (28%), Positives = 86/190 (45%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A +V + +DTPGH F R + D VVL+V A +G MPQT+
Sbjct: 51 GITILAKATSVEWRGTRVNIVDTPGHADFGGEVERILSMVDGVVLLVDAAEGPMPQTKFV 110
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQ---DLISEQVIPEEYGGASPFISISAKTGV 217
+ A G+ IV +NK+DK D DR DL + +E P + S ++G
Sbjct: 111 TSKALALGLRPIVVLNKVDKPDAEPDRALDECFDLFANLGANDEQLDF-PHLYASGRSGW 169
Query: 218 GINKL---LENISLQAEIL--ELKAPVTTPAKGV---IIESRL--DKGKGPVATVLIQSG 267
L ++++ E++ + AP K ++ + L D G + T ++SG
Sbjct: 170 ADTDLDGPRKDLTALFELVVRHVPAPAQIARKDEPFRMLATTLGSDPFIGRILTGRVESG 229
Query: 268 TLRCSDIVVA 277
TL+ + + A
Sbjct: 230 TLKAGETLKA 239
>UNIPROTKB|Q2GD95 [details] [associations]
symbol:typA "GTP-binding protein TypA" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006298
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924
GO:GO:0006184 GO:GO:0005622 EMBL:CP000237 GenomeReviews:CP000237_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG1217
HOGENOM:HOG000282351 KO:K06207 PANTHER:PTHR23115:SF14
TIGRFAMs:TIGR01394 OMA:GPLAQTK RefSeq:YP_506551.1
ProteinModelPortal:Q2GD95 STRING:Q2GD95 GeneID:3932206
KEGG:nse:NSE_0673 PATRIC:22681363 ProtClustDB:CLSK2527909
BioCyc:NSEN222891:GHFU-687-MONOMER Uniprot:Q2GD95
Length = 596
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 281/598 (46%), Positives = 403/598 (67%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
A+IAHVDHGKTTL ++LLRQ+ + MD N +E++RGIT+FSK S+ Y
Sbjct: 9 AVIAHVDHGKTTLTNNLLRQANVL---DEVG---MDRNPLEQKRGITMFSKVASVSYGNV 62
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+IN+IDTPGH+DFGGEVERILSMVD+V+LL+D+ EG MPQT+FV KALK+G +PIV++N
Sbjct: 63 KINLIDTPGHSDFGGEVERILSMVDSVMLLVDSAEGVMPQTKFVLSKALKVGLRPIVIIN 122
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR + R E V++ DLF L A +EQLDFPV+Y S G+ + ++ +++PL E
Sbjct: 123 KVDRPDRRIEEVINEISDLFLALEANDEQLDFPVLYASGRDGWCVRDLNDQRESLVPLLE 182
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ Y PV K + P + + LE ++LG+I IG+I G I V +N +
Sbjct: 183 TIIGYTPVRKYDREAPFSMLVTMLENDNFLGRILIGKIEQGSISVNAHVKAINLSGELLE 242
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++I ++++F G+ + +V A +G+I+ I G+ + + T+CDPS + + ID T+
Sbjct: 243 NSRITKLQIFDGMVKKVVENAEAGEIIAIAGLADTSVTDTVCDPSVNTPIDAIPIDPATI 302
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+IN VN SP G+EG +T+R I RL E+K N+ +++ + + +EV GRGEL L
Sbjct: 303 SINISVNTSPFTGKEGNKLTSRMILARLLQEVKTNVSIKMEER--GEGQFEVMGRGELQL 360
Query: 1286 TILIENMRREGYELSVSRPRVIFKT-LNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
+LIENMR+EG+ELSVSRP+V+ K NG+ EP E L +D++E GI+M+ LN R G
Sbjct: 361 GVLIENMRKEGFELSVSRPKVVIKIDENGQKMEPIEELTIDMDEEYAGIVMETLNTRKGI 420
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++E RVRL Y IP+R LIG+ +F + TRG+G+++ VF YAP+ K +
Sbjct: 421 MQSMENYPGGRVRLVYHIPARSLIGYHGKFYSDTRGSGILNKVFYGYAPYSGK----IDS 476
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVL+S G+AVAY+L+ LQDRG +F+ D VY GMI+G HSR NDL VN +K KQ
Sbjct: 477 RSNGVLVSNGQGEAVAYALFNLQDRGIMFVKPQDPVYCGMIVGEHSRGNDLDVNVLKGKQ 536
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
LTNIR++GSDEA++L P+ +TLE + +INDDELVE+TP ++RLRK+ L N RKK+
Sbjct: 537 LTNIRAAGSDEAVRLSPPLLMTLEEMMAYINDDELVEVTPLSLRLRKKVLDSNMRKKQ 594
Score = 170 (64.9 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAG----------GITQHIGAYNVVTNHGSITF 120
+ ++ HVDHGKT+L + +R+ NV+ E G GIT +V + I
Sbjct: 8 IAVIAHVDHGKTTLTNNLLRQANVL-DEVGMDRNPLEQKRGITMFSKVASVSYGNVKINL 66
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH F R + D V+L+V + +GVMPQT+ ++ A G+ IV INK+D+
Sbjct: 67 IDTPGHSDFGGEVERILSMVDSVMLLVDSAEGVMPQTKFVLSKALKVGLRPIVIINKVDR 126
Query: 181 LDINLDRIKQDL 192
D ++ + ++
Sbjct: 127 PDRRIEEVINEI 138
>TIGR_CMR|NSE_0673 [details] [associations]
symbol:NSE_0673 "GTP-binding protein TypA" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0005622 EMBL:CP000237
GenomeReviews:CP000237_GR Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG1217 HOGENOM:HOG000282351 KO:K06207
PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394 OMA:GPLAQTK
RefSeq:YP_506551.1 ProteinModelPortal:Q2GD95 STRING:Q2GD95
GeneID:3932206 KEGG:nse:NSE_0673 PATRIC:22681363
ProtClustDB:CLSK2527909 BioCyc:NSEN222891:GHFU-687-MONOMER
Uniprot:Q2GD95
Length = 596
Score = 1384 (492.3 bits), Expect = 1.6e-141, P = 1.6e-141
Identities = 281/598 (46%), Positives = 403/598 (67%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
A+IAHVDHGKTTL ++LLRQ+ + MD N +E++RGIT+FSK S+ Y
Sbjct: 9 AVIAHVDHGKTTLTNNLLRQANVL---DEVG---MDRNPLEQKRGITMFSKVASVSYGNV 62
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+IN+IDTPGH+DFGGEVERILSMVD+V+LL+D+ EG MPQT+FV KALK+G +PIV++N
Sbjct: 63 KINLIDTPGHSDFGGEVERILSMVDSVMLLVDSAEGVMPQTKFVLSKALKVGLRPIVIIN 122
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DR + R E V++ DLF L A +EQLDFPV+Y S G+ + ++ +++PL E
Sbjct: 123 KVDRPDRRIEEVINEISDLFLALEANDEQLDFPVLYASGRDGWCVRDLNDQRESLVPLLE 182
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
I+ Y PV K + P + + LE ++LG+I IG+I G I V +N +
Sbjct: 183 TIIGYTPVRKYDREAPFSMLVTMLENDNFLGRILIGKIEQGSISVNAHVKAINLSGELLE 242
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
++I ++++F G+ + +V A +G+I+ I G+ + + T+CDPS + + ID T+
Sbjct: 243 NSRITKLQIFDGMVKKVVENAEAGEIIAIAGLADTSVTDTVCDPSVNTPIDAIPIDPATI 302
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
+IN VN SP G+EG +T+R I RL E+K N+ +++ + + +EV GRGEL L
Sbjct: 303 SINISVNTSPFTGKEGNKLTSRMILARLLQEVKTNVSIKMEER--GEGQFEVMGRGELQL 360
Query: 1286 TILIENMRREGYELSVSRPRVIFKT-LNGELYEPYENLFVDIEEINQGIIMQKLNYRGGD 1344
+LIENMR+EG+ELSVSRP+V+ K NG+ EP E L +D++E GI+M+ LN R G
Sbjct: 361 GVLIENMRKEGFELSVSRPKVVIKIDENGQKMEPIEELTIDMDEEYAGIVMETLNTRKGI 420
Query: 1345 LKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
++++E RVRL Y IP+R LIG+ +F + TRG+G+++ VF YAP+ K +
Sbjct: 421 MQSMENYPGGRVRLVYHIPARSLIGYHGKFYSDTRGSGILNKVFYGYAPYSGK----IDS 476
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R NGVL+S G+AVAY+L+ LQDRG +F+ D VY GMI+G HSR NDL VN +K KQ
Sbjct: 477 RSNGVLVSNGQGEAVAYALFNLQDRGIMFVKPQDPVYCGMIVGEHSRGNDLDVNVLKGKQ 536
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKKK 1522
LTNIR++GSDEA++L P+ +TLE + +INDDELVE+TP ++RLRK+ L N RKK+
Sbjct: 537 LTNIRAAGSDEAVRLSPPLLMTLEEMMAYINDDELVEVTPLSLRLRKKVLDSNMRKKQ 594
Score = 170 (64.9 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 44/132 (33%), Positives = 71/132 (53%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAG----------GITQHIGAYNVVTNHGSITF 120
+ ++ HVDHGKT+L + +R+ NV+ E G GIT +V + I
Sbjct: 8 IAVIAHVDHGKTTLTNNLLRQANVL-DEVGMDRNPLEQKRGITMFSKVASVSYGNVKINL 66
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH F R + D V+L+V + +GVMPQT+ ++ A G+ IV INK+D+
Sbjct: 67 IDTPGHSDFGGEVERILSMVDSVMLLVDSAEGVMPQTKFVLSKALKVGLRPIVIINKVDR 126
Query: 181 LDINLDRIKQDL 192
D ++ + ++
Sbjct: 127 PDRRIEEVINEI 138
>TIGR_CMR|CHY_1766 [details] [associations]
symbol:CHY_1766 "translation initiation factor IF-2"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006847
Pfam:PF00009 Pfam:PF03144 Pfam:PF04760 PROSITE:PS01176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0003743
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532
HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487
ProtClustDB:PRK05306 HAMAP:MF_00100_B OMA:DNLFDTM
RefSeq:YP_360586.1 ProteinModelPortal:Q3AB98 SMR:Q3AB98
STRING:Q3AB98 GeneID:3726211 KEGG:chy:CHY_1766 PATRIC:21276645
BioCyc:CHYD246194:GJCN-1765-MONOMER Uniprot:Q3AB98
Length = 827
Score = 1338 (476.1 bits), Expect = 4.4e-139, Sum P(2) = 4.4e-139
Identities = 280/557 (50%), Positives = 378/557 (67%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M ++ VIK LM G + TINQ +D +TA I+ + G+ K + +LL E +
Sbjct: 261 MGKSAAEVIKKLMSYGILATINQEIDADTATIIATDFGYEVTVEKEEKEDIWLLEETPDD 320
Query: 61 ITAESLV-RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
ESL R PIVT+MGHVDHGKTSLLD IR+TNV +EAGGITQHIGAY V N IT
Sbjct: 321 --PESLEPRPPIVTVMGHVDHGKTSLLDAIRQTNVTATEAGGITQHIGAYQVEHNGRKIT 378
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
F+DTPGHEAFTAMRARGA+VTDI +LVVAADDGVMPQT EAI HAK +GVP+IVA+NKID
Sbjct: 379 FIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTVEAINHAKAAGVPIIVAVNKID 438
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K + DR+KQ L +IPE +GG + F+ +SA +GI +LLE I L A++ ELKA
Sbjct: 439 KPNAQPDRVKQQLTEYGLIPEAWGGDTVFVEVSALKKIGIEELLEMILLVADLKELKANP 498
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
PA+G +IE++LDKG+GPVATVL+QSGTL D+VV G +YGR+R+++++ G+ + +A
Sbjct: 499 NKPARGTVIEAKLDKGRGPVATVLVQSGTLNVGDVVVVGLTYGRVRALMDDKGRRVKKAT 558
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PS+PVE+ GL VP +G+ L V+ +EK AR + RQ + R+ +L E++F I
Sbjct: 559 PSMPVEVLGLNDVPSAGDILVVVDDEKTARTLAEKRQEQKREEELRASSKVSLEDLFKHI 618
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
+ K+K L I++K DV+GS E + +SL LST++VK+ VIH+ VG I E+DI LA AS A
Sbjct: 619 QEGKIKELNIVLKADVHGSVEAIKQSLSRLSTEEVKVNVIHSGVGAITETDIMLASASNA 678
Query: 420 IIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIR 479
I+IGFNVR D++ RKLA+ +IK+ + L+ E+KE +LG AE+R
Sbjct: 679 IVIGFNVRPDSNARKLAETEKIDVRVYRIIYELLDDIKAAMAGLLEPEQKEVVLGRAEVR 738
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ +KV IAG Y+LEG I R +K+R++R+ +I G ++SLKRFKD+V+EV G+EC
Sbjct: 739 KTFKASKVGTIAGLYVLEGKITRSAKVRVIRDGIVIHEGNVESLKRFKDDVREVAQGYEC 798
Query: 540 ERLSRIENQIQR-DISE 555
N I+ DI E
Sbjct: 799 GLTIEKFNDIREGDIIE 815
Score = 182 (69.1 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 72/231 (31%), Positives = 104/231 (45%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D +RQ+ N+ A + GIT +E+NG +
Sbjct: 333 VMGHVDHGKTSLLD-AIRQT-------NVTAT--------EAGGITQHIGAYQVEHNGRK 376
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I IDTPGH F R + D +L++ A +G MPQT A G IV VNK
Sbjct: 377 ITFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGVMPQTVEAINHAKAAGVPIIVAVNK 436
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEA 1106
ID+ NA+P+ V + L D + SAL E MI L A
Sbjct: 437 IDKPNAQPDRVKQQLTEY--GLIPEAWGGDTVFVEVSALKKIGIEELL----EMI-LLVA 489
Query: 1107 ILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIM 1157
LK + K N N P + +I + G + + SG + ++ DVV++
Sbjct: 490 DLKEL---KANPNKPARGTVIEAKLDKGRGPVATVLVQSGTL-NVGDVVVV 536
Score = 44 (20.5 bits), Expect = 4.4e-139, Sum P(2) = 4.4e-139
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 1141 GRIL-SGRIKSLQD-VVIMNGPDDKPNKAKINQIRVFKGLDRVLV----NEALSGDIVLI 1194
G+I S +++ ++D +VI G + + K + V +G + L N+ GDI+
Sbjct: 757 GKITRSAKVRVIRDGIVIHEGNVESLKRFKDDVREVAQGYECGLTIEKFNDIREGDIIEA 816
Query: 1195 TGIEEI 1200
IEE+
Sbjct: 817 FTIEEV 822
>TAIR|locus:2173169 [details] [associations]
symbol:SVR3 "AT5G13650" species:3702 "Arabidopsis
thaliana" [GO:0003746 "translation elongation factor activity"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0031425 "chloroplast
RNA processing" evidence=IMP] [GO:0000302 "response to reactive
oxygen species" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002688 GO:GO:0009570
GO:GO:0003924 GO:GO:0006184 GO:GO:0000302 GO:GO:0003746
GO:GO:0010468 Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 GO:GO:0031425
OMA:GWVRMEF PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394
IPI:IPI00517480 RefSeq:NP_568289.3 UniGene:At.21627
ProteinModelPortal:F4K409 SMR:F4K409 PRIDE:F4K409
EnsemblPlants:AT5G13650.2 GeneID:831209 KEGG:ath:AT5G13650
Uniprot:F4K409
Length = 676
Score = 1343 (477.8 bits), Expect = 3.6e-137, P = 3.6e-137
Identities = 268/587 (45%), Positives = 397/587 (67%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+AHVDHGKTTL+D +LRQ+ FR NQ + RIMDSN++E+ERGITI SKN SI Y T
Sbjct: 87 AIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILSKNTSITYKNT 146
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
++NIIDTPGH+DFGGEVER+L+MVD VLL++D+VEGPMPQTRFV +KAL+ G +VVVN
Sbjct: 147 KVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVN 206
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
KIDR +ARPE+VV++TF+LF +L AT+EQ DF IY S + G A + ++ PLFE
Sbjct: 207 KIDRPSARPEFVVNSTFELFIELNATDEQCDFQAIYASGIKGKAGLSPDDLAEDLGPLFE 266
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPN 1165
AI++ VP + LQ+ ++EY + G+I IGR+ +G ++ DV + +D
Sbjct: 267 AIIRCVPGPNIEKDGALQMLATNIEYDEHKGRIAIGRLHAGVLRKGMDVRVCTS-EDSCR 325
Query: 1166 KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTL 1225
A+++++ V++ RV + +GDI + GI+ I IG TI D LP + ++EPT+
Sbjct: 326 FARVSELFVYEKFYRVPTDSVEAGDICAVCGIDNIQIGETIADKVHGKPLPTIKVEEPTV 385
Query: 1226 TINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHL 1285
++F VN SP +GREGK++T+R +++RL+ E++ N+ ++V + D+ + VSGRG LH+
Sbjct: 386 KMSFSVNTSPFSGREGKYVTSRNLRDRLNRELERNLAMKVEDGETADT-FIVSGRGTLHI 444
Query: 1286 TILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDL 1345
TILIENMRREGYE V P+VI K +N +L EPYE V++ E + G +++ L R G +
Sbjct: 445 TILIENMRREGYEFMVGPPKVINKRVNDKLLEPYEIATVEVPEAHMGPVVELLGKRRGQM 504
Query: 1346 KNIE-INEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
+++ + + L Y+IP+RGL+G +N +T +RGT +++ VF+ Y P+ D+
Sbjct: 505 FDMQGVGSEGTTFLRYKIPTRGLLGLRNAILTASRGTAILNTVFDSYGPWAG----DIST 560
Query: 1405 RRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQ 1464
R G L++ G + +Y+L Q+RG++F+ VY+G I+GIH R DL +N K+K
Sbjct: 561 RDLGSLVAFEDGTSTSYALASAQERGQMFVGSGVDVYKGQIVGIHQRPGDLGLNICKKKA 620
Query: 1465 LTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRK 1511
TNIRS+ D + L +P+ +L+ IE+I +DELVE+TP +IR+ K
Sbjct: 621 ATNIRSN-KDVTVILDTPLTYSLDDCIEYIEEDELVEVTPSSIRMCK 666
Score = 155 (59.6 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 62/225 (27%), Positives = 105/225 (46%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYN---------VVTNHGSITF-- 120
+ I+ HVDHGKT+L+D + + VF + + + I N +++ + SIT+
Sbjct: 86 IAIVAHVDHGKTTLVDSMLRQAKVFRDNQVMQERIMDSNDLERERGITILSKNTSITYKN 145
Query: 121 -----LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
+DTPGH F R + D V+LVV + +G MPQTR + A G ++V +
Sbjct: 146 TKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVV 205
Query: 176 NKIDKLDINLDRIKQ---DLISE-QVIPEEYGGASPFIS-ISAKTGVGINKLLENISLQA 230
NKID+ + + +L E E+ + + S I K G+ + L E++
Sbjct: 206 NKIDRPSARPEFVVNSTFELFIELNATDEQCDFQAIYASGIKGKAGLSPDDLAEDLGPLF 265
Query: 231 EILELKAPVTTPAK-GVI--IESRL--DKGKGPVATVLIQSGTLR 270
E + P K G + + + + D+ KG +A + +G LR
Sbjct: 266 EAIIRCVPGPNIEKDGALQMLATNIEYDEHKGRIAIGRLHAGVLR 310
>TIGR_CMR|GSU_1588 [details] [associations]
symbol:GSU_1588 "translation initiation factor IF-2"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR001806 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144
Pfam:PF04760 PRINTS:PR00449 PROSITE:PS01176 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0003924
GO:GO:0006184 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003743
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532
HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487
ProtClustDB:PRK05306 HAMAP:MF_00100_B RefSeq:NP_952639.1
ProteinModelPortal:Q74CT3 PRIDE:Q74CT3 GeneID:2687362
KEGG:gsu:GSU1588 PATRIC:22026021 OMA:EISEYRQ
BioCyc:GSUL243231:GH27-1622-MONOMER Uniprot:Q74CT3
Length = 883
Score = 1334 (474.7 bits), Expect = 3.2e-136, P = 3.2e-136
Identities = 270/540 (50%), Positives = 376/540 (69%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M VK++ +I+ LMK+G MVTIN LD +TA ++ E G+ ++ E +L
Sbjct: 320 MGVKATDLIRVLMKMGMMVTINHPLDVDTATLVASEFGYEIENVAIDVDE--MLESVPD- 376
Query: 61 ITAESLV-RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
ESL R P+VTIMGHVDHGKTSLLD IR+ NV+ EAGGITQHIGAY+V N IT
Sbjct: 377 -APESLTKRPPVVTIMGHVDHGKTSLLDAIREANVIAGEAGGITQHIGAYDVELNGRKIT 435
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
FLDTPGHEAFTAMRARGAKVTDIV+LVVAADDGVMPQTREA+ H+K +GVP+IVAINKID
Sbjct: 436 FLDTPGHEAFTAMRARGAKVTDIVILVVAADDGVMPQTREAVNHSKAAGVPIIVAINKID 495
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K + +R+KQ+L+ ++ EE+GG + F+ +SAK + + +LLE + LQA++++LKA
Sbjct: 496 KPEAKPERVKQELMEFGLVSEEWGGETIFVEVSAKKRINLPELLEMVLLQADVMDLKANP 555
Query: 240 TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAG 299
A+G I+E++LD+G+GPVATVL+Q GTL+ D VAG + GR+R+M N+ G + EAG
Sbjct: 556 DKDARGTIVEAKLDRGRGPVATVLVQEGTLKIGDYFVAGVNSGRVRAMQNDRGDKVNEAG 615
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
PS+PVE+ G T VP +G+ +++EK+A+EI RQ K R+ +L+K E +++ I
Sbjct: 616 PSMPVEVIGFTGVPDAGDVFISLVDEKRAKEIASHRQQKLRETELAKHSKMSLEQLYDKI 675
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
K +VK+L I+K DV GS E ++ESL+ LSTD V++ VIH++VG I E+D+NLA AS A
Sbjct: 676 QKGEVKDLNAIVKADVQGSVEAVSESLRKLSTDAVRLNVIHSSVGAITETDVNLASASNA 735
Query: 420 IIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIR 479
II+GFNVR + A+ ++IK + L+ +E LG AE+R
Sbjct: 736 IILGFNVRPEPKASAHAEKEGVDIRLYNIIYDAVEDIKKAMEGLLEPTLREKYLGRAEVR 795
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+V V KV +AGCYI +G + R++++R+LR+ +I+ G++ SL+RFKD+VKEV G+EC
Sbjct: 796 EVFSVPKVGNVAGCYIQDGKMIRNAQVRLLRDNVVIYEGKMSSLRRFKDDVKEVATGYEC 855
Score = 176 (67.0 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 49/132 (37%), Positives = 66/132 (50%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERG-ITIFSKNCSIEYNGT 985
I+ HVDHGKT+L+D I ++N I E G IT +E NG
Sbjct: 390 IMGHVDHGKTSLLD-----------------AIREANVIAGEAGGITQHIGAYDVELNGR 432
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+I +DTPGH F R + D V+L++ A +G MPQTR + G IV +N
Sbjct: 433 KITFLDTPGHEAFTAMRARGAKVTDIVILVVAADDGVMPQTREAVNHSKAAGVPIIVAIN 492
Query: 1046 KIDRSNARPEWV 1057
KID+ A+PE V
Sbjct: 493 KIDKPEAKPERV 504
>DICTYBASE|DDB_G0276121 [details] [associations]
symbol:DDB_G0276121 "GTP-binding protein typA/BipA"
species:44689 "Dictyostelium discoideum" [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 dictyBase:DDB_G0276121
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 EMBL:AAFI02000014 GO:GO:0005622
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG1217
PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394 RefSeq:XP_643254.1
ProteinModelPortal:Q75JG3 STRING:Q75JG3 EnsemblProtists:DDB0169521
GeneID:8620297 KEGG:ddi:DDB_G0276121 InParanoid:Q75JG3 OMA:GPLAQTK
ProtClustDB:CLSZ2729168 Uniprot:Q75JG3
Length = 713
Score = 1304 (464.1 bits), Expect = 1.7e-135, Sum P(2) = 1.7e-135
Identities = 279/599 (46%), Positives = 393/599 (65%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAHVDHGKT+L+D LLRQSG + + + R+MDSN +EKERGITI +K S +Y
Sbjct: 117 AIIAHVDHGKTSLVDQLLRQSGAIKATEK-DERVMDSNALEKERGITIMAKCTSFDYKNH 175
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
++NI+DTPGH DFGGEVER+LSMVD V+LL+DA EGPM QT+FV KAL G +PIVV+N
Sbjct: 176 KLNIVDTPGHGDFGGEVERVLSMVDGVVLLVDATEGPMAQTKFVLSKALSQGLRPIVVIN 235
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+DRS AR + V + FDLF L A++EQL++P +Y S G+A + Q +++PL +
Sbjct: 236 KLDRSTARVDEVENEIFDLFATLGASDEQLNYPTLYASGRQGWAIRSRGDDQKDILPLLD 295
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD--VVIMNGPDDK 1163
I++YV P + + +LE ++G+I G+I SG+ K Q VV M G +
Sbjct: 296 TIVEYVECPNVKPEEPFTMLVTNLESDPFVGRIVTGKIYSGKAKVGQPLRVVDMKG-NVI 354
Query: 1164 PNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEP 1223
+ +KI +I + ++R+++ E +GDIV I G + + +++ + + ID P
Sbjct: 355 EDGSKITKIFCRRAMERIVLEEGEAGDIVGIAGFSQATVTNSLIAEGVKEPIKAIPIDPP 414
Query: 1224 TLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGEL 1283
L + F NNSP AG+EG TT +IK+RL EI++N+ L+V N +S +EV GRGEL
Sbjct: 415 VLAMYFEANNSPFAGKEGTHCTTLKIKSRLLKEIESNVSLQV--NVTGES-FEVKGRGEL 471
Query: 1284 HLTILIENMRREGYELSVSRPRVIF-KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRG 1342
L IL+ENMRREGYE++VS+PRV+F K NG L EP E + +D++ G I++KL+ R
Sbjct: 472 QLGILLENMRREGYEVAVSQPRVVFTKDENGNLMEPQEEVTIDVDTEYSGAIIEKLSKRN 531
Query: 1343 GDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
GD+ +++ + RL + +PSRGLIG ++E I T+GTG+++H+F Y P +K D
Sbjct: 532 GDITDMK-QSMGKSRLVFLVPSRGLIGLRSEIINDTKGTGVMNHLFHSYVP--HKGPMD- 587
Query: 1403 GKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKE 1462
+ G LIS G A A+SL L+DRG LFI VY GMIIG +S+ DL VNP+K
Sbjct: 588 -NKEKGALISMSEGVATAFSLSALEDRGVLFIGPQTQVYSGMIIGENSKLTDLDVNPVKS 646
Query: 1463 KQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERKK 1521
KQLTNIR++ +E I+L P + LE AI + +DEL+EITPK+IRLRKR L +R+K
Sbjct: 647 KQLTNIRTTVKEEGIRLSPPKLLKLEEAIACVKEDELIEITPKSIRLRKRELDSTKRQK 705
Score = 149 (57.5 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 46/136 (33%), Positives = 68/136 (50%)
Query: 72 VTIMGHVDHGKTSLLDY-------IRKTN----VVFSEA----GGITQHIGAYNVVTNHG 116
V I+ HVDHGKTSL+D I+ T V+ S A GIT + +
Sbjct: 116 VAIIAHVDHGKTSLVDQLLRQSGAIKATEKDERVMDSNALEKERGITIMAKCTSFDYKNH 175
Query: 117 SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
+ +DTPGH F R + D VVL+V A +G M QT+ ++ A G+ IV IN
Sbjct: 176 KLNIVDTPGHGDFGGEVERVLSMVDGVVLLVDATEGPMAQTKFVLSKALSQGLRPIVVIN 235
Query: 177 KIDKLDINLDRIKQDL 192
K+D+ +D ++ ++
Sbjct: 236 KLDRSTARVDEVENEI 251
Score = 44 (20.5 bits), Expect = 1.7e-135, Sum P(2) = 1.7e-135
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASK 418
N EK++N+ II D +G ++ + L+ K + N E + + I +K
Sbjct: 109 NHEKIRNVAIIAHVD-HGKTSLVDQLLRQSGAIKATEKDERVMDSNALEKERGITIMAK 166
Score = 37 (18.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 500 IRRDSKIRILRNKNIIWTGELDSLKRFKDN 529
++ D I I + ELDS KR K N
Sbjct: 678 VKEDELIEITPKSIRLRKRELDSTKRQKIN 707
>TIGR_CMR|SPO_0061 [details] [associations]
symbol:SPO_0061 "translation initiation factor IF-2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144 Pfam:PF04760
PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924 GO:GO:0006184
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532
KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 TIGRFAMs:TIGR00487 HOGENOM:HOG000076907
ProtClustDB:PRK05306 HAMAP:MF_00100_B InterPro:IPR013575
Pfam:PF08364 OMA:EISEYRQ RefSeq:YP_165335.1
ProteinModelPortal:Q5LWL4 GeneID:3193823 KEGG:sil:SPO0061
PATRIC:23373359 Uniprot:Q5LWL4
Length = 835
Score = 1253 (446.1 bits), Expect = 1.2e-127, P = 1.2e-127
Identities = 260/542 (47%), Positives = 364/542 (67%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGH-VAHASKLNDPESFLLNEYNK 59
M+ + + V+K LMK+G MVT NQ +D +TA +++EE GH V S +D E ++++ +
Sbjct: 268 MAERVADVVKELMKMGMMVTQNQTIDADTAELIIEEFGHKVVRVSD-SDVED-VISDI-E 324
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-I 118
+ + R P++TIMGHVDHGKTSLLD IR VV EAGGITQHIGAY V T+ G+ +
Sbjct: 325 DAEEDLKPRPPVITIMGHVDHGKTSLLDAIRDAKVVAGEAGGITQHIGAYQVKTDGGATL 384
Query: 119 TFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKI 178
+FLDTPGH AFT+MR+RGA+VTDIVVLVVAADD VMPQT EAI HAK +GVP+IVAINKI
Sbjct: 385 SFLDTPGHAAFTSMRSRGAQVTDIVVLVVAADDAVMPQTVEAINHAKAAGVPMIVAINKI 444
Query: 179 DKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAP 238
DK + N +++ DL+ +V+ E G + +SAKTG G+++LLE I+LQAEILELKA
Sbjct: 445 DKPEANPTKVRTDLLQHEVVVEAMSGEVQDVEVSAKTGEGLDELLEAIALQAEILELKAN 504
Query: 239 VTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEA 298
PA+G +IE++LD G+GPVATVLIQ GTLR DI V G YG++R+++N+ G+ + EA
Sbjct: 505 PDRPAQGAVIEAQLDVGRGPVATVLIQKGTLRQGDIFVVGEQYGKVRALINDKGERVSEA 564
Query: 299 GPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFND 358
GPS+PVE+ GL P +G+ L V E +AREI +R +D + + E +
Sbjct: 565 GPSVPVEVLGLNGTPEAGDVLNVTSTEAQAREIAEYRAQVAKDKRAAAGAATTLEQLMAK 624
Query: 359 INK-EKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIAS 417
E V L I++K DV GS E + ++++ + D+V+++V+H+ VG I E+D+ LA AS
Sbjct: 625 AKADENVAELPILVKADVQGSAEAIVQAMEKIGNDEVRVRVLHSGVGAITETDVGLAEAS 684
Query: 418 KAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAE 477
A I+GFNVRA+AS R A ++K+ + L+ E +EN +G A
Sbjct: 685 GAPIMGFNVRANASARNTANQKGVEIRYYSVIYDLVDDVKAAASGLLSAEIRENFIGYAN 744
Query: 478 IRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGF 537
I++V V+ V K+AGC + EG+ RR + +R+LR+ +I G L +LKRFKD V EV++G
Sbjct: 745 IKEVFKVSNVGKVAGCLVTEGVARRSAGVRLLRDNVVIHEGTLKTLKRFKDEVAEVQSGQ 804
Query: 538 EC 539
EC
Sbjct: 805 EC 806
Score = 137 (53.3 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 43/130 (33%), Positives = 61/130 (46%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERG-ITIFSKNCSIEYNG- 984
I+ HVDHGKT+L+D I D+ + E G IT ++ +G
Sbjct: 339 IMGHVDHGKTSLLD-----------------AIRDAKVVAGEAGGITQHIGAYQVKTDGG 381
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
++ +DTPGHA F R + D V+L++ A + MPQT A G IV +
Sbjct: 382 ATLSFLDTPGHAAFTSMRSRGAQVTDIVVLVVAADDAVMPQTVEAINHAKAAGVPMIVAI 441
Query: 1045 NKIDRSNARP 1054
NKID+ A P
Sbjct: 442 NKIDKPEANP 451
>TIGR_CMR|BA_3950 [details] [associations]
symbol:BA_3950 "translation initiation factor IF-2"
species:198094 "Bacillus anthracis str. Ames" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144 Pfam:PF04760
PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0532 HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487
ProtClustDB:PRK05306 HAMAP:MF_00100_B RefSeq:NP_846193.1
RefSeq:YP_020589.1 RefSeq:YP_029915.1 ProteinModelPortal:Q81WM3
SMR:Q81WM3 IntAct:Q81WM3 DNASU:1086560
EnsemblBacteria:EBBACT00000011974 EnsemblBacteria:EBBACT00000014525
EnsemblBacteria:EBBACT00000019755 GeneID:1086560 GeneID:2815002
GeneID:2852148 KEGG:ban:BA_3950 KEGG:bar:GBAA_3950 KEGG:bat:BAS3664
OMA:DNLFDTM BioCyc:BANT260799:GJAJ-3722-MONOMER
BioCyc:BANT261594:GJ7F-3838-MONOMER Uniprot:Q81WM3
Length = 686
Score = 1235 (439.8 bits), Expect = 9.9e-126, P = 9.9e-126
Identities = 265/560 (47%), Positives = 365/560 (65%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMG-HVAHASKLNDPE-SFLLNEYN 58
+S + S +IK L LG M TINQ LD++T ++ + G V +++ E ++E +
Sbjct: 122 LSKEPSEIIKKLFMLGIMATINQDLDKDTIELIANDYGIEVEEEVIVSETEFETFIDEQD 181
Query: 59 KNITAESLVRAP-IVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
E+L P +VTIMGHVDHGKT+LLD IR + V EAGGITQHIGAY V N
Sbjct: 182 DE---ENLKERPAVVTIMGHVDHGKTTLLDSIRNSKVTAGEAGGITQHIGAYQVELNDKK 238
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
ITFLDTPGH AFT MRARGA+VTDI ++VVAADDGVMPQT EAI HAK +GVP+IVA+NK
Sbjct: 239 ITFLDTPGHAAFTTMRARGAQVTDITIIVVAADDGVMPQTVEAINHAKAAGVPIIVAVNK 298
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
+DK N DR+ Q+L +++PE +GG + F+ ISA G GI+ LLE I L +E+ E KA
Sbjct: 299 MDKPAANPDRVMQELTEYELVPEAWGGDTIFVPISAIQGEGIDNLLEMILLISEVEEYKA 358
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILE 297
A G +IE++LDKGKG +AT+L+Q+GTLR D +V G S+GR+R+M+++ G+ +
Sbjct: 359 NPNRYATGTVIEAQLDKGKGTIATLLVQNGTLRVGDPIVVGTSFGRVRAMVSDIGRRVKV 418
Query: 298 AGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFR-QGKFRDVKLSKQKLHKTENMF 356
AGPS PVEI GL +VP +G+ +EKKAR+IG R Q + K KL E++F
Sbjct: 419 AGPSTPVEITGLNEVPQAGDRFMAFADEKKARQIGESRAQEALLAQRGEKSKL-SLEDLF 477
Query: 357 NDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIA 416
I + VK + +I+K DV GS E + SL+ + + VK+++IH VG I ESDI LA A
Sbjct: 478 QQIQEGDVKEINLIVKADVQGSVEAMAASLRKIDVEGVKVKIIHTGVGAITESDIILASA 537
Query: 417 SKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLA 476
S AI+IGFNVR D + ++ A+ +EI++ + ++ E +E ++G A
Sbjct: 538 SNAIVIGFNVRPDVNAKRTAELENVDIRLHRIIYKVIEEIEAAMQGMLDPEFEEKVIGQA 597
Query: 477 EIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAG 536
E+RQ V KV IAGCY+ +G I RDS +RI+R+ +I+ G+LD+LKRFKD+VKEV
Sbjct: 598 EVRQTFKVTKVGTIAGCYVTDGKITRDSGVRIIRDGVVIFEGQLDTLKRFKDDVKEVAQN 657
Query: 537 FECE-RLSRIENQIQRDISE 555
+EC + R + + DI E
Sbjct: 658 YECGITIERYNDLKEGDIIE 677
Score = 160 (61.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 63/232 (27%), Positives = 100/232 (43%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKTTL+D + +N + A + GIT +E N +
Sbjct: 195 IMGHVDHGKTTLLDSI--------RNSKVTAG--------EAGGITQHIGAYQVELNDKK 238
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGHA F R + D ++++ A +G MPQT A G IV VNK
Sbjct: 239 ITFLDTPGHAAFTTMRARGAQVTDITIIVVAADDGVMPQTVEAINHAKAAGVPIIVAVNK 298
Query: 1047 IDRSNARPEWVVD--ATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
+D+ A P+ V+ ++L + + + P+ SA+ G +N MI L
Sbjct: 299 MDKPAANPDRVMQELTEYELVPEAWGGDT-IFVPI---SAIQGEGIDNLL----EMILLI 350
Query: 1105 EAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVI 1156
+ +Y K N N +I + G I + +G ++ +V+
Sbjct: 351 SEVEEY----KANPNRYATGTVIEAQLDKGKGTIATLLVQNGTLRVGDPIVV 398
>TIGR_CMR|CJE_0131 [details] [associations]
symbol:CJE_0131 "translation initiation factor IF-2"
species:195099 "Campylobacter jejuni RM1221" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144 Pfam:PF04760
PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532
HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487
ProtClustDB:PRK05306 HAMAP:MF_00100_B RefSeq:YP_178155.1
ProteinModelPortal:Q5HX30 STRING:Q5HX30 GeneID:3230894
KEGG:cjr:CJE0131 PATRIC:20041969 OMA:IGAYKVN
BioCyc:CJEJ195099:GJC0-135-MONOMER Uniprot:Q5HX30
Length = 871
Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
Identities = 252/539 (46%), Positives = 351/539 (65%)
Query: 5 SSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESF-LLNEYNKNITA 63
+S VI L LG M T N LD++ IL E G + +N+ + F + +Y +
Sbjct: 308 TSEVISKLFMLGMMTTKNDFLDEDAIEILAAEFG--IEINIINEADEFDYVKDYEEETDE 365
Query: 64 ESLV-RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLD 122
+ LV RAP++TIMGHVDHGKTSLLDYIRK+ V EAGGITQH+GAY V N ITF+D
Sbjct: 366 KDLVTRAPVITIMGHVDHGKTSLLDYIRKSRVASGEAGGITQHVGAYMVEKNGRKITFID 425
Query: 123 TPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLD 182
TPGHEAFTAMRARGA +TDIV++VVAADDGV PQT+EAI HAK +GVP+I+AINK+DK
Sbjct: 426 TPGHEAFTAMRARGASITDIVIIVVAADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEA 485
Query: 183 INLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTP 242
N D +K L +++P E+GG+ F+ +SAKTG+GI LLE + LQA+ILELKA +
Sbjct: 486 ANPDMVKTQLAEMEIMPVEWGGSYEFVGVSAKTGMGIEDLLEIVLLQADILELKANPKSF 545
Query: 243 AKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSI 302
AK IIES + KG+G VAT+++Q+GTL VVAG +YG++R+M ++ GK + E P
Sbjct: 546 AKASIIESSVQKGRGAVATIIVQNGTLTIGSTVVAGEAYGKVRAMSDDQGKALKEIKPGE 605
Query: 303 PVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKE 362
I GL++V +GE L + +K+ARE R R +LSK + + I +
Sbjct: 606 CGVIVGLSEVADAGEILIAVKTDKEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEG 665
Query: 363 KVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASK-AII 421
+K L +I+K DV GS E L SL+ L D++K+ +IH+ VG I +SDI LA AS+ +I+
Sbjct: 666 NLKALPVILKADVQGSLEALKASLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIV 725
Query: 422 IGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLI-PLEKKENLLGLAEIRQ 480
+GFN+R ++ A+ ++K+ + ++ P+ +E L G AEIRQ
Sbjct: 726 LGFNIRPTGEVKERAKDKGVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQL-GQAEIRQ 784
Query: 481 VILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
VI V K+ +IAGC + EG+I R +KIR++R+ +++ G + SLKRFKD+ KEV G+EC
Sbjct: 785 VINVPKIGQIAGCMVTEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYEC 843
Score = 167 (63.8 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 46/131 (35%), Positives = 68/131 (51%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKT+L+D++ RK++ + S E GIT +E NG +
Sbjct: 377 IMGHVDHGKTSLLDYI-------RKSR------VASGEAG---GITQHVGAYMVEKNGRK 420
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I IDTPGH F R S+ D V++++ A +G PQT+ A G I+ +NK
Sbjct: 421 ITFIDTPGHEAFTAMRARGASITDIVIIVVAADDGVKPQTKEAINHAKAAGVPIIIAINK 480
Query: 1047 IDRSNARPEWV 1057
+D+ A P+ V
Sbjct: 481 MDKEAANPDMV 491
Score = 42 (19.8 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 324 NEKKA--REIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKNLLIIIKTDVYGSREV 381
+EKK +E L ++ K ++K+ K+ K E I+ K ++L G V
Sbjct: 85 SEKKEPKKEEKLKQEVKKEELKIEKENA-KEEEKQEIIDAHKPQSLASATLAKRRGL--V 141
Query: 382 LTESLKNLSTDKVKIQVIHNAVGNINESDIN 412
+ + K D+ +IQV V N N+ IN
Sbjct: 142 IVKKKK----DEEEIQVKKEEVKNSNDISIN 168
Score = 37 (18.1 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 578 LDYSYAKIFFTTFNKDISIKNILDNLSKAKNY 609
LD +I F +I+I N D K+Y
Sbjct: 328 LDEDAIEILAAEFGIEINIINEADEFDYVKDY 359
>TIGR_CMR|DET_0983 [details] [associations]
symbol:DET_0983 "translation initiation factor IF-2"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144 Pfam:PF04760
PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532
HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487 OMA:HIGAFTV
ProtClustDB:PRK05306 HAMAP:MF_00100_B RefSeq:YP_181706.1
ProteinModelPortal:Q3Z7U3 STRING:Q3Z7U3 GeneID:3229760
KEGG:det:DET0983 PATRIC:21609015 BioCyc:DETH243164:GJNF-984-MONOMER
Uniprot:Q3Z7U3
Length = 593
Score = 1171 (417.3 bits), Expect = 6.0e-119, P = 6.0e-119
Identities = 254/549 (46%), Positives = 353/549 (64%)
Query: 8 VIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKNITAESLV 67
VIK LM+ G M INQV++ E A +VE G A L + ++ + ++ L
Sbjct: 43 VIKALMRKGIMANINQVIEFEVAKGIVEAAGFEARLKVLKKSAAKKVSPAKEKLSNFPL- 101
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHE 127
R P+VTIMGHVDHGKT LLD IR TNV+ EAGGITQHIGAY V ITFLDTPGHE
Sbjct: 102 RPPVVTIMGHVDHGKTRLLDAIRSTNVMEKEAGGITQHIGAYQVEIKGQKITFLDTPGHE 161
Query: 128 AFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDR 187
AFTAMRARGA+ TDI +LVVAADDGVMPQT EA+ HAK +GVP+I+AINK+DK + N DR
Sbjct: 162 AFTAMRARGAQATDITILVVAADDGVMPQTLEALDHAKAAGVPIILAINKMDKPEANPDR 221
Query: 188 IKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGVI 247
+KQ L ++ EE+GG + I SA+ GIN+LLE + L AE+ +L+A PA GV+
Sbjct: 222 VKQQLAEAGLVVEEWGGDTLAIPTSAREKKGINELLEAVLLIAELEDLRADPNQPASGVV 281
Query: 248 IESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEIQ 307
IE+ +DK +GP+ATVL+QSGTL+ D VVAG ++GR+++M N+ GK I +A PS PV +
Sbjct: 282 IEAEMDKNRGPMATVLVQSGTLKLGDTVVAGTTWGRVKAMFNDVGKRIKKAEPSTPVALL 341
Query: 308 GLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKNL 367
G+ VP G+++ + EK+AR++ + V + T N+++ ++K +K L
Sbjct: 342 GMESVPQVGDKIIAVATEKQARDM----VNENSQVTRKTNAVSLT-NVYDQVSKGNIKEL 396
Query: 368 LIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAIIIGFNVR 427
II+KTDV GS E + +SL+ LSTDK+KI + + VGNI ESD+ LA+AS +IIGF+
Sbjct: 397 NIILKTDVQGSLEPIKDSLEKLSTDKIKININRSGVGNITESDVMLAMASGGLIIGFSTG 456
Query: 428 ADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQVILVNKV 487
+ + ++LA ++++ + L+ KE + G AE+R V K
Sbjct: 457 IETNAQRLADAEDIDIRHYDIIYKLVEDVEKAVQGLLEPTIKEVIDGRAEVRAVFESTKK 516
Query: 488 SKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECERLSRIEN 547
IAGC +LEG + ++S++R+LR +I +SL+RFKD+VKEV AG+EC + N
Sbjct: 517 LSIAGCMVLEGKVLKNSQVRLLRGGEVIVDAPSNSLRRFKDDVKEVVAGYECGVGLKDFN 576
Query: 548 QIQR-DISE 555
Q+ DI E
Sbjct: 577 DFQKSDILE 585
Score = 161 (61.7 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 68/233 (29%), Positives = 98/233 (42%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERG-ITIFSKNCSIEYNGT 985
I+ HVDHGKT L+D I +N +EKE G IT +E G
Sbjct: 108 IMGHVDHGKTRLLD-----------------AIRSTNVMEKEAGGITQHIGAYQVEIKGQ 150
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+I +DTPGH F R D +L++ A +G MPQT A G I+ +N
Sbjct: 151 KITFLDTPGHEAFTAMRARGAQATDITILVVAADDGVMPQTLEALDHAKAAGVPIILAIN 210
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K+D+ A P+ V + L E D I TSA + ++G + L E
Sbjct: 211 KMDKPEANPDRVKQQLAEA--GLVVEEWGGDTLAIPTSA---------REKKG-INELLE 258
Query: 1106 AILKYVPVH--KDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVI 1156
A+L + + + N P +I E G + + SG +K L D V+
Sbjct: 259 AVLLIAELEDLRADPNQPASGVVIEAEMDKNRGPMATVLVQSGTLK-LGDTVV 310
Score = 44 (20.5 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 1407 NGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKE 1462
+G LI +S + + +L D + I H D++Y+ ++ + LL IKE
Sbjct: 446 SGGLIIGFS-TGIETNAQRLADAEDIDIRHYDIIYK-LVEDVEKAVQGLLEPTIKE 499
>UNIPROTKB|O06563 [details] [associations]
symbol:typA "POSSIBLE GTP-BINDING TRANSLATION ELONGATION
FACTOR TYPA (TYROSINE PHOSPHORYLATED PROTEIN A) (GTP-BINDING
PROTEIN)" species:83332 "Mycobacterium tuberculosis H37Rv"
[GO:0005618 "cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005618 EMBL:BX842575
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0005622 GO:GO:0003746 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HSSP:P13551 HOGENOM:HOG000282351 KO:K06207
OMA:GWVRMEF PANTHER:PTHR23115:SF14 TIGRFAMs:TIGR01394 EMBL:CP003248
PIR:F70556 RefSeq:NP_215681.1 RefSeq:NP_335645.1
RefSeq:YP_006514540.1 SMR:O06563 EnsemblBacteria:EBMYCT00000003089
EnsemblBacteria:EBMYCT00000069450 GeneID:13319744 GeneID:886038
GeneID:924875 KEGG:mtc:MT1202 KEGG:mtu:Rv1165 KEGG:mtv:RVBD_1165
PATRIC:18124414 TubercuList:Rv1165 ProtClustDB:CLSK790991
Uniprot:O06563
Length = 628
Score = 1043 (372.2 bits), Expect = 8.0e-111, Sum P(2) = 8.0e-111
Identities = 227/544 (41%), Positives = 336/544 (61%)
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
T IN+IDTPGHADFGGEVER LSMVD VLLL+DA EGP+PQTRFV RKAL I+VV
Sbjct: 71 TVINVIDTPGHADFGGEVERGLSMVDGVLLLVDASEGPLPQTRFVLRKALAAHLPVILVV 130
Query: 1045 NKIDRSNARPEWVVDATFDLF---------DKLCATEEQLDFPVIYTSALHGYANENS-- 1093
NK DR +AR VVDA+ DL + A E L P +Y S G A+ +
Sbjct: 131 NKTDRPDARIAEVVDASHDLLLDVASDLDDEAAAAAEHALGLPTLYASGRAGVASTTAPP 190
Query: 1094 --KARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKS 1150
+ G N+ PLFE + K+VP K + PLQ + +L+ S++LG++ + RI +GRI+
Sbjct: 191 DGQVPDGTNLDPLFEVLEKHVPPPKGEPDAPLQALVTNLDASTFLGRLALIRIYNGRIRK 250
Query: 1151 LQDVVIMNGPDDKPN--KAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICD 1208
Q V + D + AKI ++ +G++R + A++GDIV + G+ EI IG T+
Sbjct: 251 GQQVAWIRQVDGQQTVTTAKITELLATEGVERKPTDAAVAGDIVAVAGLPEIMIGDTLAA 310
Query: 1209 PSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKF-ITTRQIKNRLDHEIKNNIGLRVTQ 1267
+ P LP + +DEP +++ N SPLAG+ G +T R +++RLD E+ N+ +RV
Sbjct: 311 SANPVALPRITVDEPAISVTIGTNTSPLAGKVGGHKLTARMVRSRLDAELVGNVSIRVVD 370
Query: 1268 NKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIE 1327
D+ +EV GRGEL L +L+E MRREG+EL+V +P+V+ KT++G L+EP+E++ VD
Sbjct: 371 IGAPDA-WEVQGRGELALAVLVEQMRREGFELTVGKPQVVTKTIDGTLHEPFESMTVDCP 429
Query: 1328 EINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHV 1387
E G + Q + R G + + + VR+++ +PSRGLIG++ +F+T TRG+G+ V
Sbjct: 430 EEYIGAVTQLMAARKGRMVEMANHTTGWVRMDFVVPSRGLIGWRTDFLTETRGSGVGHAV 489
Query: 1388 FEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIG 1447
F+ Y P+ ++ R G L+S +G ++L +L DRG+ F+ YEGM++G
Sbjct: 490 FDGYRPWAG----EIRARHTGSLVSDRAGAITPFALLQLADRGQFFVEPGQQTYEGMVVG 545
Query: 1448 IHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNI 1507
I+ R DL +N +EK+LTN+RSS +D L P+++ LE A+E DE VE+TP+ +
Sbjct: 546 INPRPEDLDINVTREKKLTNMRSSTADVIETLAKPLQLDLERAMELCAPDECVEVTPEIV 605
Query: 1508 RLRK 1511
R+RK
Sbjct: 606 RIRK 609
Score = 439 (159.6 bits), Expect = 1.8e-38, P = 1.8e-38
Identities = 96/179 (53%), Positives = 120/179 (67%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
AI+AHVDHGKTTL+D +LRQSG R+ + R+MD+ ++E+E+GITI +KN ++ +
Sbjct: 7 AIVAHVDHGKTTLVDAMLRQSGALRERGELQERVMDTGDLEREKGITILAKNTAVHRHHP 66
Query: 984 -GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
GT IN+IDTPGHADFGGEVER LSMVD VLLL+DA EGP+PQTRFV RKAL
Sbjct: 67 DGTVTVINVIDTPGHADFGGEVERGLSMVDGVLLLVDASEGPLPQTRFVLRKALAAHLPV 126
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLF---------DKLCATEEQLDFPVIYTSALHGYAN 1090
I+VVNK DR +AR VVDA+ DL + A E L P +Y S G A+
Sbjct: 127 ILVVNKTDRPDARIAEVVDASHDLLLDVASDLDDEAAAAAEHALGLPTLYASGRAGVAS 185
Score = 128 (50.1 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +DTPGH F RG + D V+L+V A +G +PQTR + A + +P+I+ +NK
Sbjct: 73 INVIDTPGHADFGGEVERGLSMVDGVLLLVDASEGPLPQTRFVLRKALAAHLPVILVVNK 132
Query: 178 IDKLDINLDRI 188
D+ D + +
Sbjct: 133 TDRPDARIAEV 143
Score = 73 (30.8 bits), Expect = 8.0e-111, Sum P(2) = 8.0e-111
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFL 121
V I+ HVDHGKT+L+D + + + E G + + + + IT L
Sbjct: 6 VAIVAHVDHGKTTLVDAMLRQSGALRERGELQERVMDTGDLEREKGITIL 55
>UNIPROTKB|P65131 [details] [associations]
symbol:infB "Translation initiation factor IF-2"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IGI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144 Pfam:PF04760
PRINTS:PR00315 PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005737 GO:GO:0040007 GO:GO:0005618
GO:GO:0005576 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0003924 GO:GO:0006184 EMBL:BX842581
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532
HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487
ProtClustDB:PRK05306 HAMAP:MF_00100_B PIR:B70694 RefSeq:NP_217355.1
RefSeq:NP_337417.1 RefSeq:YP_006516289.1 ProteinModelPortal:P65131
SMR:P65131 PRIDE:P65131 EnsemblBacteria:EBMYCT00000001352
EnsemblBacteria:EBMYCT00000071672 GeneID:13317628 GeneID:888157
GeneID:925370 KEGG:mtc:MT2905 KEGG:mtu:Rv2839c KEGG:mtv:RVBD_2839c
PATRIC:18128160 TubercuList:Rv2839c OMA:PGNNPFA Uniprot:P65131
Length = 900
Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
Identities = 247/548 (45%), Positives = 341/548 (62%)
Query: 6 SVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKNITA-- 63
+ +++ L LG+MVT Q + ET +L EM + D + LL ++ +
Sbjct: 329 AALVQALFNLGEMVTATQSVGDETLELLGSEMNYNVQVVSPEDEDRELLESFDLSYGEDE 388
Query: 64 ---ESL-VRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTN-HGS- 117
E L VR P+VT+MGHVDHGKT LLD IRK NV +EAGGITQHIGAY V + GS
Sbjct: 389 GGEEDLQVRPPVVTVMGHVDHGKTRLLDTIRKANVREAEAGGITQHIGAYQVAVDLDGSQ 448
Query: 118 --ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
ITF+DTPGHEAFTAMRARGAK TDI +LVVAADDGVMPQT EAI HA+ + VP++VA+
Sbjct: 449 RLITFIDTPGHEAFTAMRARGAKATDIAILVVAADDGVMPQTVEAINHAQAADVPIVVAV 508
Query: 176 NKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEI-LE 234
NKIDK + +I+ L ++PEE+GG + F+ ISAK G I L E + L A+ L+
Sbjct: 509 NKIDKEGADPAKIRGQLTEYGLVPEEFGGDTMFVDISAKQGTNIEALEEAVLLTADAALD 568
Query: 235 LKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKN 294
L+A A+GV IE+ LD+G+GPVATVL+Q GTLR D VVAG +YGR+R M++E+G++
Sbjct: 569 LRANPDMEAQGVAIEAHLDRGRGPVATVLVQRGTLRVGDSVVAGDAYGRVRRMVDEHGED 628
Query: 295 ILEAGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTEN 354
+ A PS PV++ G T VP +G+ V+ ++ AR+I R + R+ ++ + +
Sbjct: 629 VEVALPSRPVQVIGFTSVPGAGDNFLVVDEDRIARQIADRRSARKRNALAARSRKRISLE 688
Query: 355 MFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTD-KVKIQVIHNAVGNINESDINL 413
+ KE L +I+K D G+ E L E+L + D +V ++VI VG I E+++NL
Sbjct: 689 DLDSALKE-TSQLNLILKGDNAGTVEALEEALMGIQVDDEVVLRVIDRGVGGITETNVNL 747
Query: 414 AIASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLL 473
A AS A+IIGFNVRA+ +LA EI+ + L+ +EN L
Sbjct: 748 ASASDAVIIGFNVRAEGKATELASREGVEIRYYSVIYQAIDEIEQALRGLLKPIYEENQL 807
Query: 474 GLAEIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELD--SLKRFKDNVK 531
G AEIR + +KV IAGC + G++RR++K R+LR+ NI+ L SL+R KD+V
Sbjct: 808 GRAEIRALFRSSKVGLIAGCLVTSGVMRRNAKARLLRD-NIVVAENLSIASLRREKDDVT 866
Query: 532 EVKAGFEC 539
EV+ GFEC
Sbjct: 867 EVRDGFEC 874
Score = 141 (54.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT L+D T RK N R ++ I + G + +++ +G++
Sbjct: 403 VMGHVDHGKTRLLD-------TIRK---ANVREAEAGGITQHIG----AYQVAVDLDGSQ 448
Query: 987 --INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
I IDTPGH F R D +L++ A +G MPQT A +V V
Sbjct: 449 RLITFIDTPGHEAFTAMRARGAKATDIAILVVAADDGVMPQTVEAINHAQAADVPIVVAV 508
Query: 1045 NKIDRSNARP 1054
NKID+ A P
Sbjct: 509 NKIDKEGADP 518
>TIGR_CMR|ECH_0563 [details] [associations]
symbol:ECH_0563 "translation initiation factor IF-2"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006847
Pfam:PF00009 Pfam:PF03144 Pfam:PF04760 PROSITE:PS01176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0003743
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532 KO:K02519
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156
TIGRFAMs:TIGR00487 HOGENOM:HOG000076907 ProtClustDB:PRK05306
HAMAP:MF_00100_B RefSeq:YP_507375.1 ProteinModelPortal:Q2GGQ8
STRING:Q2GGQ8 GeneID:3927066 KEGG:ech:ECH_0563 PATRIC:20576592
BioCyc:ECHA205920:GJNR-565-MONOMER Uniprot:Q2GGQ8
Length = 842
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 234/546 (42%), Positives = 342/546 (62%)
Query: 1 MSVKSSVVIKNLMKLGQM-VTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNE--Y 57
MS + V L ++G+ + LD + A ++VE H +ND + L E Y
Sbjct: 276 MSERVKDVQHMLFQMGRRDIKPTDFLDSDHASVIVEAFNHTFKL--VNDGK---LEEDLY 330
Query: 58 NKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
E L RAP+VT+MGHVDHGKTSLLD IRK+NV E GITQHIGAY ++ +
Sbjct: 331 ADGNDKELLPRAPVVTVMGHVDHGKTSLLDAIRKSNVADGEFKGITQHIGAYQIMLDGDK 390
Query: 118 -ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
ITF+DTPGHEAFTAMRA G VTDIVVLVVAADDG+MPQT E+I H K + V +IVA+N
Sbjct: 391 RITFIDTPGHEAFTAMRACGTNVTDIVVLVVAADDGIMPQTIESINHVKAANVAMIVAVN 450
Query: 177 KIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELK 236
KIDK D N+D+I L++ V+ E GG + +SAK + +++L +I L AE+LELK
Sbjct: 451 KIDKHDANIDKITNSLLNHGVVAESLGGDVIVVPVSAKERINLDQLKSSILLMAELLELK 510
Query: 237 APVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGA-SYGRIRSMLNENGKNI 295
A T A GV+IES++D+ G VAT+++Q GTL+ DI+V G SYG++R+M N +G++
Sbjct: 511 AVYDTRASGVVIESKVDRNCGVVATLIVQKGTLKAGDIIVVGHNSYGKVRNMFNSDGRSE 570
Query: 296 LEAGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENM 355
A PS+PV++ GL VP SG V+ +EK+ARE+ +RQ F + +L K +
Sbjct: 571 KVAIPSMPVKVLGLNNVPNSGTNFIVVDSEKQARELISYRQELF-NAELEANAKPKMDA- 628
Query: 356 FNDINK-EKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLA 414
N I V L +I+K DV GS E + S+ ++ + +K+ V++ VGN+ +SD+ LA
Sbjct: 629 -NSILACGVVDELNVILKCDVMGSVEAICYSISKITHEDIKLNVLYKGVGNVTKSDVLLA 687
Query: 415 IASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLI-PLEKKENLL 473
S +II+ FNV+ DAS ++LA+ ++K +++++ PL++ E +
Sbjct: 688 ETSNSIILAFNVKTDASVKELAKQKCIEIKHYSVIYDIIDDVKKILSSMLKPLQQ-EVQV 746
Query: 474 GLAEIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEV 533
G IR+V + + GCY+ G++R+ + ++++RN N+I G++ L+RFKD+VKEV
Sbjct: 747 GTLSIRKVFSSGSIGSVLGCYVTNGIVRKGALVKLIRNNNVIHEGKIKVLRRFKDDVKEV 806
Query: 534 KAGFEC 539
AGFEC
Sbjct: 807 AAGFEC 812
Score = 125 (49.1 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 45/136 (33%), Positives = 65/136 (47%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKE-RGITIFSKNCSIEYNGT 985
++ HVDHGKT+L+D + RK SN + E +GIT I +G
Sbjct: 347 VMGHVDHGKTSLLDAI-------RK----------SNVADGEFKGITQHIGAYQIMLDGD 389
Query: 986 -RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RI IDTPGH F ++ D V+L++ A +G MPQT IV V
Sbjct: 390 KRITFIDTPGHEAFTAMRACGTNVTDIVVLVVAADDGIMPQTIESINHVKAANVAMIVAV 449
Query: 1045 NKIDRSNARPEWVVDA 1060
NKID+ +A + + ++
Sbjct: 450 NKIDKHDANIDKITNS 465
Score = 54 (24.1 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 1329 INQGIIMQKLNYRGGDLKNIEINEKERVRLE 1359
+N G++ + L GGD+ + ++ KER+ L+
Sbjct: 467 LNHGVVAESL---GGDVIVVPVSAKERINLD 494
Score = 45 (20.9 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 18/81 (22%), Positives = 35/81 (43%)
Query: 174 AINKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEIL 233
++ K + D+ L+ + EQV+ E + +S++ V ++N + I
Sbjct: 125 SVEKSESDDVTLEEESSKKVEEQVVEEAHDNTDT-VSLNVVENVQEESQVDNQVESSNIS 183
Query: 234 ELKAPVTTPAKGVIIESRLDK 254
++ P KG I E +L K
Sbjct: 184 DILQP-----KG-IEEKKLKK 198
>GENEDB_PFALCIPARUM|PF07_0062 [details] [associations]
symbol:PF07_0062 "GTP-binding translation
elongation factor tu family protein, putative" species:5833
"Plasmodium falciparum" [GO:0003746 "translation elongation factor
activity" evidence=ISS] [GO:0006414 "translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
GO:GO:0003746 Gene3D:3.30.70.240 EMBL:AL844506 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HSSP:P32324 HOGENOM:HOG000282351 PANTHER:PTHR23115:SF14 OMA:GPLAQTK
RefSeq:XP_001349059.1 ProteinModelPortal:Q8IBU4 IntAct:Q8IBU4
MINT:MINT-1554886 EnsemblProtists:PF07_0062:mRNA GeneID:2655106
KEGG:pfa:PF07_0062 EuPathDB:PlasmoDB:PF3D7_0715600
ProtClustDB:CLSZ2430912 Uniprot:Q8IBU4
Length = 754
Score = 619 (223.0 bits), Expect = 1.0e-105, Sum P(2) = 1.0e-105
Identities = 149/404 (36%), Positives = 219/404 (54%)
Query: 1121 PLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDR 1180
P + + +++ +G G+I G IK +V+ + I I KGL
Sbjct: 349 PFCMLVSLIDHQEGIGVTITGKIFKGVIKKGDSIVVKTEENKLRGHCIIKNIFYMKGLKI 408
Query: 1181 VLVNEALSGDIVLITGIEEIC--IGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAG 1238
V A +GDIV IT + + + TI L ID P L + N SPL G
Sbjct: 409 ENVPFASAGDIVNITIAKGVTPSVNDTITSDENMESLKTRPIDPPVLCLKISQNTSPLTG 468
Query: 1239 REGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYE 1298
++GK IT I NRL E NI + +++++ DS YEV GRGEL L ILIE +RREGYE
Sbjct: 469 KDGKHITLSSIGNRLKKEAAINIAIEISESEKKDS-YEVKGRGELQLGILIEKLRREGYE 527
Query: 1299 LSVSRPRVIF-KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVR 1357
+++S P VI+ K G L EP E + I +++KLN R ++ +I ++ +
Sbjct: 528 MTISSPNVIYTKDEKGNLLEPIEEYHITIPTSMTSNVIEKLNTRKAEIVDIINDDDDNTF 587
Query: 1358 LEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR-RNGVLISQYSG 1416
++ PSR G ++ +++GT +I+ +EY K K KR RNGV+IS SG
Sbjct: 588 IKCICPSRNFFGMRSYLRDISKGTSIINSELKEY-----KKKQPSYKRDRNGVIISSSSG 642
Query: 1417 KAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEA 1476
A+SL +Q +G LF+N N YEGMIIG H ND+ +N IK K + ++R+ G ++
Sbjct: 643 TTTAFSLDPIQQKGNLFVNENYPTYEGMIIGEHFLSNDIEMNAIKVKPVQHLRNKGHEDT 702
Query: 1477 IQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
I+ I+ IT+EYA+ FI DDE +E+TPK I +RK+ L +RK
Sbjct: 703 IR-INHKNITIEYALSFIQDDEEIEVTPKRIVMRKKILNTEQRK 745
Score = 471 (170.9 bits), Expect = 1.0e-105, Sum P(2) = 1.0e-105
Identities = 108/236 (45%), Positives = 157/236 (66%)
Query: 896 IYLS-DLLSKRFLHGQNLFLSDENIYIL----IKS-AIIAHVDHGKTTLIDHLLRQSGTF 949
IY++ D+ S ++G+ S + + I+ I++ AIIAHVDHGKTTL+D LLRQ G
Sbjct: 66 IYMNNDIHSFNHINGKCHHYSSKKLNIIDPEKIRNVAIIAHVDHGKTTLVDKLLRQGGEI 125
Query: 950 RKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMV 1009
N RIMD N++EKERGITI SK I+Y+ NI+DTPGH+DFGGEVER+L+++
Sbjct: 126 TNND----RIMDHNDLEKERGITIMSKVTRIKYDDYYFNIVDTPGHSDFGGEVERVLNLI 181
Query: 1010 DNVLLLIDAVEGPMPQTRFVTRKAL-KLGFKPIVVVNKIDR-SNARP-EWVVDATFDLFD 1066
D V L+ID VEGP QT+FV +K+L K IV++NK D+ SN + E + + FDLF
Sbjct: 182 DGVCLIIDVVEGPKNQTKFVLKKSLLNPSCKIIVIMNKFDKPSNMKKKEEIENEIFDLFV 241
Query: 1067 KLCATEEQLDFPVIYTSALHGYANEN-SKARQGN-----MIPLFEAILKYV--PVH 1114
L A EE +++P++Y SA +G+ +N +A+Q N ++ +F+ I++Y+ PVH
Sbjct: 242 DLNAPEESMNYPILYASAKNGWCTDNFHEAKQNNTQKNDVLVIFKKIIEYIDSPVH 297
Score = 108 (43.1 bits), Expect = 5.6e-69, Sum P(3) = 5.6e-69
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH--IGAYNVVTNHGSIT---------- 119
V I+ HVDHGKT+L+D + + + I H + +T +T
Sbjct: 101 VAIIAHVDHGKTTLVDKLLRQGGEITNNDRIMDHNDLEKERGITIMSKVTRIKYDDYYFN 160
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKIS-GVPLIVAINKI 178
+DTPGH F R + D V L++ +G QT+ + + ++ +IV +NK
Sbjct: 161 IVDTPGHSDFGGEVERVLNLIDGVCLIIDVVEGPKNQTKFVLKKSLLNPSCKIIVIMNKF 220
Query: 179 DKLDINLDRIKQDLISE 195
DK N+ + K+++ +E
Sbjct: 221 DKPS-NMKK-KEEIENE 235
Score = 50 (22.7 bits), Expect = 1.2e-64, Sum P(4) = 1.2e-64
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 350 HKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLS--TDKVKIQVIHNAVGNIN 407
H + N I+ EK++N+ II D +G ++ + L+ T+ +I + HN +
Sbjct: 84 HYSSKKLNIIDPEKIRNVAIIAHVD-HGKTTLVDKLLRQGGEITNNDRI-MDHNDL---- 137
Query: 408 ESDINLAIASKAIIIGFN 425
E + + I SK I ++
Sbjct: 138 EKERGITIMSKVTRIKYD 155
Score = 39 (18.8 bits), Expect = 5.6e-69, Sum P(3) = 5.6e-69
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 860 LTLDKCLNIDTIIKYSE 876
L +DK NI+ +K+SE
Sbjct: 312 LLMDKQANINENVKFSE 328
Score = 37 (18.1 bits), Expect = 1.2e-64, Sum P(4) = 1.2e-64
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 632 NSIENAMMISKLIDGIKYCMQFHIKKN 658
N I+ +I +++G K +F +KK+
Sbjct: 179 NLIDGVCLIIDVVEGPKNQTKFVLKKS 205
>UNIPROTKB|Q8IBU4 [details] [associations]
symbol:PF07_0062 "GTP-binding translation elongation factor
tu family protein, putative" species:36329 "Plasmodium falciparum
3D7" [GO:0003746 "translation elongation factor activity"
evidence=ISS] [GO:0006414 "translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006298 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0005622 GO:GO:0003746
Gene3D:3.30.70.240 EMBL:AL844506 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 HSSP:P32324
HOGENOM:HOG000282351 PANTHER:PTHR23115:SF14 OMA:GPLAQTK
RefSeq:XP_001349059.1 ProteinModelPortal:Q8IBU4 IntAct:Q8IBU4
MINT:MINT-1554886 EnsemblProtists:PF07_0062:mRNA GeneID:2655106
KEGG:pfa:PF07_0062 EuPathDB:PlasmoDB:PF3D7_0715600
ProtClustDB:CLSZ2430912 Uniprot:Q8IBU4
Length = 754
Score = 619 (223.0 bits), Expect = 1.0e-105, Sum P(2) = 1.0e-105
Identities = 149/404 (36%), Positives = 219/404 (54%)
Query: 1121 PLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDR 1180
P + + +++ +G G+I G IK +V+ + I I KGL
Sbjct: 349 PFCMLVSLIDHQEGIGVTITGKIFKGVIKKGDSIVVKTEENKLRGHCIIKNIFYMKGLKI 408
Query: 1181 VLVNEALSGDIVLITGIEEIC--IGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAG 1238
V A +GDIV IT + + + TI L ID P L + N SPL G
Sbjct: 409 ENVPFASAGDIVNITIAKGVTPSVNDTITSDENMESLKTRPIDPPVLCLKISQNTSPLTG 468
Query: 1239 REGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYE 1298
++GK IT I NRL E NI + +++++ DS YEV GRGEL L ILIE +RREGYE
Sbjct: 469 KDGKHITLSSIGNRLKKEAAINIAIEISESEKKDS-YEVKGRGELQLGILIEKLRREGYE 527
Query: 1299 LSVSRPRVIF-KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVR 1357
+++S P VI+ K G L EP E + I +++KLN R ++ +I ++ +
Sbjct: 528 MTISSPNVIYTKDEKGNLLEPIEEYHITIPTSMTSNVIEKLNTRKAEIVDIINDDDDNTF 587
Query: 1358 LEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR-RNGVLISQYSG 1416
++ PSR G ++ +++GT +I+ +EY K K KR RNGV+IS SG
Sbjct: 588 IKCICPSRNFFGMRSYLRDISKGTSIINSELKEY-----KKKQPSYKRDRNGVIISSSSG 642
Query: 1417 KAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEA 1476
A+SL +Q +G LF+N N YEGMIIG H ND+ +N IK K + ++R+ G ++
Sbjct: 643 TTTAFSLDPIQQKGNLFVNENYPTYEGMIIGEHFLSNDIEMNAIKVKPVQHLRNKGHEDT 702
Query: 1477 IQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKENERK 1520
I+ I+ IT+EYA+ FI DDE +E+TPK I +RK+ L +RK
Sbjct: 703 IR-INHKNITIEYALSFIQDDEEIEVTPKRIVMRKKILNTEQRK 745
Score = 471 (170.9 bits), Expect = 1.0e-105, Sum P(2) = 1.0e-105
Identities = 108/236 (45%), Positives = 157/236 (66%)
Query: 896 IYLS-DLLSKRFLHGQNLFLSDENIYIL----IKS-AIIAHVDHGKTTLIDHLLRQSGTF 949
IY++ D+ S ++G+ S + + I+ I++ AIIAHVDHGKTTL+D LLRQ G
Sbjct: 66 IYMNNDIHSFNHINGKCHHYSSKKLNIIDPEKIRNVAIIAHVDHGKTTLVDKLLRQGGEI 125
Query: 950 RKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMV 1009
N RIMD N++EKERGITI SK I+Y+ NI+DTPGH+DFGGEVER+L+++
Sbjct: 126 TNND----RIMDHNDLEKERGITIMSKVTRIKYDDYYFNIVDTPGHSDFGGEVERVLNLI 181
Query: 1010 DNVLLLIDAVEGPMPQTRFVTRKAL-KLGFKPIVVVNKIDR-SNARP-EWVVDATFDLFD 1066
D V L+ID VEGP QT+FV +K+L K IV++NK D+ SN + E + + FDLF
Sbjct: 182 DGVCLIIDVVEGPKNQTKFVLKKSLLNPSCKIIVIMNKFDKPSNMKKKEEIENEIFDLFV 241
Query: 1067 KLCATEEQLDFPVIYTSALHGYANEN-SKARQGN-----MIPLFEAILKYV--PVH 1114
L A EE +++P++Y SA +G+ +N +A+Q N ++ +F+ I++Y+ PVH
Sbjct: 242 DLNAPEESMNYPILYASAKNGWCTDNFHEAKQNNTQKNDVLVIFKKIIEYIDSPVH 297
Score = 108 (43.1 bits), Expect = 5.6e-69, Sum P(3) = 5.6e-69
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQH--IGAYNVVTNHGSIT---------- 119
V I+ HVDHGKT+L+D + + + I H + +T +T
Sbjct: 101 VAIIAHVDHGKTTLVDKLLRQGGEITNNDRIMDHNDLEKERGITIMSKVTRIKYDDYYFN 160
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKIS-GVPLIVAINKI 178
+DTPGH F R + D V L++ +G QT+ + + ++ +IV +NK
Sbjct: 161 IVDTPGHSDFGGEVERVLNLIDGVCLIIDVVEGPKNQTKFVLKKSLLNPSCKIIVIMNKF 220
Query: 179 DKLDINLDRIKQDLISE 195
DK N+ + K+++ +E
Sbjct: 221 DKPS-NMKK-KEEIENE 235
Score = 50 (22.7 bits), Expect = 1.2e-64, Sum P(4) = 1.2e-64
Identities = 20/78 (25%), Positives = 38/78 (48%)
Query: 350 HKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLS--TDKVKIQVIHNAVGNIN 407
H + N I+ EK++N+ II D +G ++ + L+ T+ +I + HN +
Sbjct: 84 HYSSKKLNIIDPEKIRNVAIIAHVD-HGKTTLVDKLLRQGGEITNNDRI-MDHNDL---- 137
Query: 408 ESDINLAIASKAIIIGFN 425
E + + I SK I ++
Sbjct: 138 EKERGITIMSKVTRIKYD 155
Score = 39 (18.8 bits), Expect = 5.6e-69, Sum P(3) = 5.6e-69
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 860 LTLDKCLNIDTIIKYSE 876
L +DK NI+ +K+SE
Sbjct: 312 LLMDKQANINENVKFSE 328
Score = 37 (18.1 bits), Expect = 1.2e-64, Sum P(4) = 1.2e-64
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 632 NSIENAMMISKLIDGIKYCMQFHIKKN 658
N I+ +I +++G K +F +KK+
Sbjct: 179 NLIDGVCLIIDVVEGPKNQTKFVLKKS 205
>TIGR_CMR|APH_0446 [details] [associations]
symbol:APH_0446 "translation initiation factor IF-2"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006847
Pfam:PF00009 Pfam:PF03144 Pfam:PF04760 PROSITE:PS01176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0003924
GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0003743
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532 KO:K02519
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156
TIGRFAMs:TIGR00487 RefSeq:YP_505049.1 ProteinModelPortal:Q2GKQ2
STRING:Q2GKQ2 GeneID:3930221 KEGG:aph:APH_0446 PATRIC:20949512
HOGENOM:HOG000076907 OMA:KEFRGIT ProtClustDB:PRK05306
BioCyc:APHA212042:GHPM-473-MONOMER HAMAP:MF_00100_B Uniprot:Q2GKQ2
Length = 823
Score = 1041 (371.5 bits), Expect = 4.5e-105, P = 4.5e-105
Identities = 220/540 (40%), Positives = 330/540 (61%)
Query: 1 MSVKSSVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKN 60
M+ K+ V++ L +G ++ LD E A + E GH + E L + +
Sbjct: 258 MAEKAQDVLRMLSHVGVEARMDTGLDSEVACEIAVEFGHRPRVVSIVKMEQELSDVCGDD 317
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+E R P+VT+MGHVDHGKTSLLD +RK+NV E GITQHIGAY + + ITF
Sbjct: 318 FVSEP--RPPVVTVMGHVDHGKTSLLDVLRKSNVAEKEFRGITQHIGAYQIDVDGKKITF 375
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGHEAF MRARGA VTDIVVLVVAADDG+MPQT E+I H K +GV ++VA+NKIDK
Sbjct: 376 LDTPGHEAFADMRARGANVTDIVVLVVAADDGIMPQTVESINHVKAAGVAMVVAVNKIDK 435
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
D ++ RI +L+ VI EE GG + +SAKTG I+KL I L AE+LEL AP
Sbjct: 436 SDADVGRITNELLQYGVIAEELGGDVMIVPVSAKTGENIDKLQSAILLLAEMLELSAPRE 495
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAG-ASYGRIRSMLNENGKNILEAG 299
A+GV+IE+++D+G G VATV++Q GTL+ DI+VAG +SYG++RSM ++ + + A
Sbjct: 496 CRAQGVVIEAKIDRGCGVVATVIVQKGTLKKGDIIVAGDSSYGKVRSMFDDADRVVTSAL 555
Query: 300 PSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDI 359
P++PV + GL +P +G+ L V+ +EK+AR++ L+ + + + + +
Sbjct: 556 PAMPVRVLGLNAIPKAGDTLIVMPSEKQARDL-LWHRSEINSAREENRAVPSFSGAIMAS 614
Query: 360 NKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKA 419
KV+ + +I+K DV GS E ++ +++ L ++VK V+H +G++ +SD+ LA S A
Sbjct: 615 MDSKVEEINLILKADVAGSMEAVSCAVEQLVHEEVKFNVLHKEMGDVTKSDVLLAEVSSA 674
Query: 420 IIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIR 479
+I+ FNVR DA R L + ++++ ++ + +E +GL +R
Sbjct: 675 VILAFNVRVDAKARDLLRLKKVDVRHYQVIYDLVDDVRNMVSGKLKPIVQEMQVGLLTVR 734
Query: 480 QVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
Q+ K + GCY+ EG + R + + + R + +I G + +L+RFK++VKEV G EC
Sbjct: 735 QMFSSGKSGTVLGCYVTEGAVTRGATVCVCRGETVIGEGTVKALRRFKEDVKEVNRGLEC 794
Score = 165 (63.1 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 49/127 (38%), Positives = 66/127 (51%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKE-RGITIFSKNCSIEYNGT 985
++ HVDHGKT+L+D L RK SN EKE RGIT I+ +G
Sbjct: 329 VMGHVDHGKTSLLDVL-------RK----------SNVAEKEFRGITQHIGAYQIDVDGK 371
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+I +DTPGH F R ++ D V+L++ A +G MPQT G +V VN
Sbjct: 372 KITFLDTPGHEAFADMRARGANVTDIVVLVVAADDGIMPQTVESINHVKAAGVAMVVAVN 431
Query: 1046 KIDRSNA 1052
KID+S+A
Sbjct: 432 KIDKSDA 438
Score = 41 (19.5 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 208 FISISAKTGVGINKLLENISLQAEILELKA 237
+IS K G+NK + ++ Q ++ + A
Sbjct: 59 YISHDDKRRSGLNKAVSGLTAQEQLFRINA 88
>TAIR|locus:2020427 [details] [associations]
symbol:FUG1 "fu-gaeri1" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=IEA;IGI;ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IGI] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010155 "regulation of
proton transport" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
[GO:0042793 "transcription from plastid promoter" evidence=RCA]
[GO:0046777 "protein autophosphorylation" evidence=RCA]
InterPro:IPR000178 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144
Pfam:PF04760 PRINTS:PR00315 PROSITE:PS01176 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009570 GO:GO:0003924 GO:GO:0006184 GO:GO:0009941
GO:GO:0003743 EMBL:AC007651 InterPro:IPR009000 SUPFAM:SSF50447
EMBL:AF367343 EMBL:BT001007 EMBL:AK317746 IPI:IPI00545652
PIR:D86308 RefSeq:NP_173165.1 UniGene:At.18936
ProteinModelPortal:Q9SHI1 SMR:Q9SHI1 STRING:Q9SHI1 PaxDb:Q9SHI1
PRIDE:Q9SHI1 EnsemblPlants:AT1G17220.1 GeneID:838293
KEGG:ath:AT1G17220 TAIR:At1g17220 eggNOG:COG0532
HOGENOM:HOG000076906 InParanoid:Q9SHI1 KO:K02519 OMA:LECGIGM
Genevestigator:Q9SHI1 GermOnline:AT1G17220 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487 Uniprot:Q9SHI1
Length = 1026
Score = 1030 (367.6 bits), Expect = 9.0e-104, P = 9.0e-104
Identities = 222/501 (44%), Positives = 322/501 (64%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNV-VTNHG---SITFLDT 123
R P++TIMGHVDHGKT+LLDYIRK+ V SEAGGITQ IGAY V V G S FLDT
Sbjct: 500 RPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDT 559
Query: 124 PGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDI 183
PGHEAF AMRARGA+VTDI ++VVAADDG+ PQT EAIAHAK + VP+++AINKIDK
Sbjct: 560 PGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIVIAINKIDKEGA 619
Query: 184 NLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPA 243
+ DR+ Q+L S ++PE++GG P + ISA G ++ LLE + L AE+ ELKA A
Sbjct: 620 SPDRVMQELSSIGLMPEDWGGDVPMVQISALKGENVDDLLETVMLVAELQELKANPHRNA 679
Query: 244 KGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIP 303
KG++IE+ LDK KGP AT ++Q GTL+ D+VV G ++G++R++ + +G+ + EAGPSIP
Sbjct: 680 KGIVIEAGLDKAKGPFATFIVQKGTLKRGDVVVCGEAFGKVRALFDHSGERVDEAGPSIP 739
Query: 304 VEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLS-KQKLHKT--ENMFNDIN 360
V++ GL VP +G+E ++ + ARE+ R RD ++S K K ++ + ++
Sbjct: 740 VQVIGLNNVPIAGDEFEIVSSLDVAREMAEARAVSLRDERISAKAGDGKVTLSSLASAVS 799
Query: 361 KEKVKNL----L-IIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAI 415
+K+ L L II+K DV GS E + ++L+ L + V ++ + A G+++ SD++LA
Sbjct: 800 AKKMSGLDLHQLNIILKVDVQGSIEAVRQALQVLPQENVTLKFLLQATGDVSNSDVDLAS 859
Query: 416 ASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGL 475
AS+AI+ GFNV+A S +K A+ ++++ + L+ +++ +G
Sbjct: 860 ASEAIVFGFNVKASGSVKKAAENKGVEIRLYRVIYELIDDVRNAMEGLLESVEEQIPIGS 919
Query: 476 AEIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKA 535
AE+R ++AGC + EG +D IR++R + G LDSLKR K+NVKEV A
Sbjct: 920 AEVRATFSSGS-GRVAGCMVNEGKFVKDCGIRVVRKGKTVHVGVLDSLKRVKENVKEVSA 978
Query: 536 GFECE-RLSRIENQIQRDISE 555
G EC + ++ I+ DI E
Sbjct: 979 GLECGIGMDDYDDWIEGDIIE 999
Score = 152 (58.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 49/162 (30%), Positives = 78/162 (48%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKTTL+D++ RK++ ++ I + GI + + ++
Sbjct: 506 IMGHVDHGKTTLLDYI-------RKSK---VAASEAGGITQ--GIGAYKVSVPVDGKLQS 553
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
+DTPGH FG R + D ++++ A +G PQT A K PIV+ +N
Sbjct: 554 CVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHA-KAAAVPIVIAIN 612
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
KID+ A P+ V+ + L + D P++ SAL G
Sbjct: 613 KIDKEGASPDRVMQELSSI--GLMPEDWGGDVPMVQISALKG 652
Score = 51 (23.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 28/137 (20%), Positives = 63/137 (45%)
Query: 1220 IDE--PTLTINFM-VNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYE 1276
+DE P++ + + +NN P+AG E + +++ + + + LR D+ I
Sbjct: 731 VDEAGPSIPVQVIGLNNVPIAGDEFEIVSSLDVAREMAEA--RAVSLR------DERISA 782
Query: 1277 VSGRGELHLTILIENMRREGYE-LSVSRPRVIFKT-LNGELYEPYENLFVDIEEINQGII 1334
+G G++ L+ L + + L + + +I K + G + + L V +E +
Sbjct: 783 KAGDGKVTLSSLASAVSAKKMSGLDLHQLNIILKVDVQGSIEAVRQALQVLPQE---NVT 839
Query: 1335 MQKLNYRGGDLKNIEIN 1351
++ L GD+ N +++
Sbjct: 840 LKFLLQATGDVSNSDVD 856
>UNIPROTKB|E1BZP9 [details] [associations]
symbol:MTIF2 "Translation initiation factor IF-2"
species:9031 "Gallus gallus" [GO:0003743 "translation initiation
factor activity" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0003924 GO:GO:0006184 GO:GO:0003743 InterPro:IPR009000
SUPFAM:SSF50447 KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 CTD:4528 GeneTree:ENSGT00550000074932 OMA:HIGAFTV
HAMAP:MF_00100_B EMBL:AADN02046834 IPI:IPI00572544
RefSeq:NP_001186353.1 UniGene:Gga.48658 ProteinModelPortal:E1BZP9
Ensembl:ENSGALT00000013175 GeneID:421213 KEGG:gga:421213
NextBio:20824011 Uniprot:E1BZP9
Length = 726
Score = 746 (267.7 bits), Expect = 7.1e-98, Sum P(2) = 7.1e-98
Identities = 166/344 (48%), Positives = 230/344 (66%)
Query: 22 NQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKNITAESLV---RAPIVTIMGHV 78
+ +L +++ ++V++ G ++KL + + + K A+ R P+VTIMGHV
Sbjct: 130 DSILYEDSIKLIVKKSGMKYKSAKLREEKERENKDAVKRPPADPAFLTPRPPVVTIMGHV 189
Query: 79 DHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFLDTPGHEAFTAMRARGA 137
DHGKT+LLD +RKT + EAGGITQHIGA+ V G ITFLDTPGH AF+AMRARG
Sbjct: 190 DHGKTTLLDSLRKTQLAAMEAGGITQHIGAFLVHLPSGEKITFLDTPGHAAFSAMRARGT 249
Query: 138 KVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLISEQV 197
VTDIV+LVVAA+DGVM QT E+I HAK +GVPL++AINK DK + + +R+K++L++ V
Sbjct: 250 YVTDIVILVVAAEDGVMQQTIESIEHAKNAGVPLVLAINKCDKPEADPERVKKELLAHDV 309
Query: 198 IPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGVIIESRLDKGKG 257
+ EE+GG ++ISA G + L E L AE+LELKA T +G IIESR DKGKG
Sbjct: 310 VCEEFGGDVQAVNISALKGDNLMVLAEATVLLAEMLELKADYTGLVEGTIIESRKDKGKG 369
Query: 258 PVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEIQGLTKVPFSGE 317
PV T +IQ GTLR ++VAG ++ ++R M +ENGK + A PSIPVEI G +VP +G+
Sbjct: 370 PVTTAIIQRGTLRKGCVLVAGKTWAKVRFMFDENGKAVDAASPSIPVEIMGWKEVPSAGD 429
Query: 318 ELFVILNEKKAREIGLFR-----QGKF---RDVKLSKQKLHKTE 353
E+ + +E++A E+ +R Q K R+V +KQK H+ E
Sbjct: 430 EILEVESEQRAHEVVAWRTYVEQQEKMKKDREVIEAKQKEHRME 473
Score = 267 (99.0 bits), Expect = 7.1e-98, Sum P(2) = 7.1e-98
Identities = 60/184 (32%), Positives = 103/184 (55%)
Query: 362 EKVKNLL-IIIKTDVYGSREVLTESLKNLSTD-KVKIQVIHNAVGNINESDINLAIASKA 419
E +N+L IIIK DV GS E + L + D + K+ VIH +G+I+E+D++LA
Sbjct: 510 ETDENVLSIIIKGDVDGSVEAILNVLDSYDADDECKLDVIHFGMGDISETDLSLAETFNG 569
Query: 420 IIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIR 479
++ GF+V+A+ + +K+A +++K E+++ +P EN +G A +
Sbjct: 570 VVYGFSVKANETIKKMAAKKGIKIKLHNIIYKLIEDLKDELSSRLPPSVVENTIGEASVL 629
Query: 480 QVILV----NKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKA 535
+ NKV +AGC + +G + + K +++R N+IW G L SLK KD+V+ +K
Sbjct: 630 DTFSITVGKNKVP-VAGCRVQKGQLDKKMKFKLIRKGNVIWKGSLSSLKHHKDDVQVIKT 688
Query: 536 GFEC 539
G +C
Sbjct: 689 GMDC 692
Score = 154 (59.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 54/161 (33%), Positives = 75/161 (46%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKTTL+D L RK Q + A M++ I + G + +G +
Sbjct: 185 IMGHVDHGKTTLLDSL-------RKTQ-LAA--MEAGGITQHIGAFLVHLP-----SGEK 229
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGHA F R + D V+L++ A +G M QT A G ++ +NK
Sbjct: 230 ITFLDTPGHAAFSAMRARGTYVTDIVILVVAAEDGVMQQTIESIEHAKNAGVPLVLAINK 289
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
D+ A PE V D +C E D + SAL G
Sbjct: 290 CDKPEADPERVKKELL-AHDVVCE-EFGGDVQAVNISALKG 328
Score = 38 (18.4 bits), Expect = 2.8e-75, Sum P(3) = 2.8e-75
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 988 NIIDTPGHADFGGEVERILSMVDN 1011
N++ D G VE IL+++D+
Sbjct: 514 NVLSIIIKGDVDGSVEAILNVLDS 537
Score = 38 (18.4 bits), Expect = 2.8e-75, Sum P(3) = 2.8e-75
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 1458 NPIKEKQLTNIRSSGSD-EAIQLISPIKITLEYAIEFINDDELVEITPKNIR 1508
N I + L++++ D + I+ ++L+ IEF DE++ K I+
Sbjct: 666 NVIWKGSLSSLKHHKDDVQVIKTGMDCGLSLDKPIEFSIGDEIICYEEKEIQ 717
>TIGR_CMR|NSE_0522 [details] [associations]
symbol:NSE_0522 "translation initiation factor IF-2"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0003924
GO:GO:0006184 GO:GO:0003743 EMBL:CP000237 GenomeReviews:CP000237_GR
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532
HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487
ProtClustDB:PRK05306 HAMAP:MF_00100_B RefSeq:YP_506406.1
ProteinModelPortal:Q2GDP0 STRING:Q2GDP0 GeneID:3931786
KEGG:nse:NSE_0522 PATRIC:22681093 OMA:NISAKNH
BioCyc:NSEN222891:GHFU-542-MONOMER Uniprot:Q2GDP0
Length = 779
Score = 976 (348.6 bits), Expect = 1.1e-97, P = 1.1e-97
Identities = 224/545 (41%), Positives = 330/545 (60%)
Query: 12 LMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKNITAESLVRAPI 71
L K+G++ + L QET +L E+GH K + E F N + ++ R P+
Sbjct: 242 LKKMGEICGEDDYLKQETVELLALELGHEIKY-KPSTAEIFAATRRNTD-ESDLRPRVPV 299
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTA 131
VT+MGH+DHGKT+LLD +R T++ +E+GGITQHIGAY V SITF+DTPGH AFT+
Sbjct: 300 VTVMGHIDHGKTTLLDALRNTSLTATESGGITQHIGAYQVQVGDRSITFIDTPGHAAFTS 359
Query: 132 MRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIKQD 191
MR RGAKVTDIVVLVVAADDGV QT EAI HAK + VP+IVAINKIDK N R+ +
Sbjct: 360 MRMRGAKVTDIVVLVVAADDGVNKQTIEAIKHAKAAEVPIIVAINKIDKESANPARVFTE 419
Query: 192 LISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGVIIESR 251
L VI EE G ++ISAK + ++KL E I +QA+ L+LK PA+GVIIESR
Sbjct: 420 LAQHGVIVEEMHGDVMSVNISAKNHINLDKLKEVILIQADFLDLKYNPKQPAEGVIIESR 479
Query: 252 LDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEIQGLTK 311
+D+ G +T++++ G L+ + V G+ YG+IRSM+ +G+ + A PVE+ GL++
Sbjct: 480 VDRKCGAFSTLIVKEGELKTGQVAVLGSFYGKIRSMMTSSGEIVGSAVAGTPVEVMGLSE 539
Query: 312 VPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKNLLIII 371
P G FV+ +EK+A+ L ++ +K K ++ +D +K L II
Sbjct: 540 APEPGTSFFVVNSEKEAKM--LVSSHEY--IKEDSYKRPLRDSFESDKHK-----LNFII 590
Query: 372 KTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAIIIGFNVRADAS 431
K DV GS E L +S+ LS +V I ++H +G+I++SD+ LA S A I+GF V+ + +
Sbjct: 591 KADVNGSVEALVQSISGLSHPEVDIAIVHTGIGDISDSDVLLAQVSGAYIVGFRVKTEKT 650
Query: 432 TRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQVILVNKVSKIA 491
+ + K+++ + L+ + +E +LG A +++V ++ S +A
Sbjct: 651 VKDYPKIIFQSIIYDVI-----KKVQEMVELLVSPKTREVILGSAVVKEVFTLSDKSNVA 705
Query: 492 GCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECERLSRIENQIQ- 550
GC + G+I++ + IR+LRN I + SLKRF++ VKEVK+G+EC L N+I+
Sbjct: 706 GCQVKSGVIKKSASIRLLRNGENIKDLSIKSLKRFREEVKEVKSGYECGILLNGYNEIKV 765
Query: 551 RDISE 555
DI E
Sbjct: 766 GDILE 770
Score = 137 (53.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 43/129 (33%), Positives = 63/129 (48%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ H+DHGKTTL+D L +N ++ A + GIT ++
Sbjct: 302 VMGHIDHGKTTLLDAL--------RNTSLTAT--------ESGGITQHIGAYQVQVGDRS 345
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
I IDTPGHA F R + D V+L++ A +G QT + A K PI+V +N
Sbjct: 346 ITFIDTPGHAAFTSMRMRGAKVTDIVVLVVAADDGVNKQTIEAIKHA-KAAEVPIIVAIN 404
Query: 1046 KIDRSNARP 1054
KID+ +A P
Sbjct: 405 KIDKESANP 413
Score = 44 (20.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 15/72 (20%), Positives = 39/72 (54%)
Query: 1306 VIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSR 1365
V ++ E P +F ++ + G+I+++++ GD+ ++ I+ K + L+ ++ +
Sbjct: 401 VAINKIDKESANP-ARVFTELAQ--HGVIVEEMH---GDVMSVNISAKNHINLD-KL--K 451
Query: 1366 GLIGFQNEFITL 1377
+I Q +F+ L
Sbjct: 452 EVILIQADFLDL 463
>ZFIN|ZDB-GENE-030131-1092 [details] [associations]
symbol:mtif2 "mitochondrial translational
initiation factor 2" species:7955 "Danio rerio" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PROSITE:PS01176 ZFIN:ZDB-GENE-030131-1092 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156
GeneTree:ENSGT00550000074932 OMA:HIGAFTV HAMAP:MF_00100_B
EMBL:BX324134 IPI:IPI00619512 Ensembl:ENSDART00000092172
Bgee:F1QD40 Uniprot:F1QD40
Length = 705
Score = 707 (253.9 bits), Expect = 9.0e-96, Sum P(2) = 9.0e-96
Identities = 155/297 (52%), Positives = 200/297 (67%)
Query: 63 AESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFL 121
A+ + RAP+VTIMGH+DHGKT+LLD +RK+ +V EAGGITQHIGA+ V G ITFL
Sbjct: 152 AQLVTRAPVVTIMGHIDHGKTTLLDSLRKSQIVAQEAGGITQHIGAFRVELPSGEKITFL 211
Query: 122 DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKL 181
DTPGH AF+AMRARG +TDIV+LVVAADDGVM QT E+I AK + VP+IVA+NK DK
Sbjct: 212 DTPGHAAFSAMRARGTMITDIVILVVAADDGVMKQTIESIELAKKAKVPIIVAVNKCDKP 271
Query: 182 DINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTT 241
+ R+KQ+L VI E+ GG I +SA G + +L E AE+LELK T
Sbjct: 272 QADPQRVKQELAGHDVICEDLGGEIQAIHVSALKGDNLLELAEATVTLAEVLELKGDPTG 331
Query: 242 PAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPS 301
+G +IESR DKGKGPV T +IQ GTLR +VAG + ++R M +EN + + EAGPS
Sbjct: 332 LVEGSVIESRTDKGKGPVTTAIIQRGTLRKGCTLVAGKCWAKVRFMFDENNQAVKEAGPS 391
Query: 302 IPVEIQGLTKVPFSGEELFVILNEKKAREIGLFR-----QGKFRD---VKLSKQKLH 350
I VEI G +P +GEE+ + +E++ARE+ +R Q K +D V +KQK H
Sbjct: 392 IAVEIVGWKDLPSAGEEILEVESEQRAREVVEWRSYMEEQDKLKDEQQVIEAKQKQH 448
Score = 287 (106.1 bits), Expect = 9.0e-96, Sum P(2) = 9.0e-96
Identities = 72/218 (33%), Positives = 111/218 (50%)
Query: 326 KKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTES 385
KK RE + R L K HK + ++ + + + IIIK DV GS E L
Sbjct: 453 KKERESLAHLSWRQRRAALYKANKHKGIHRPSERTENEELTMPIIIKGDVDGSVEALLNI 512
Query: 386 LKNLSTD-KVKIQVIHNAVGNINESDINLAIASKAIIIGFNVRADASTRKLAQXXXXXXX 444
L++ D + + V+H VG+I+E DINLA II GFNV A S ++LA+
Sbjct: 513 LESYDADDQCLLDVVHFGVGDISEKDINLAETFSGIIYGFNVSAHKSIQQLAEKKGISLR 572
Query: 445 XXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQVILVNKVSK---IAGCYILEGLIR 501
E+K ++++ +P +EN+LG A + V K +AGC + +G +
Sbjct: 573 LHRVIYKLLDELKEDLSSKLPPTTEENILGEASVLATFTVTVGKKKLAVAGCRVQKGQLD 632
Query: 502 RDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ K R++R +++IW G + +LK KD+V VK G EC
Sbjct: 633 KKMKFRLIRGRDMIWDGSVTTLKHLKDDVLTVKTGMEC 670
Score = 155 (59.6 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 56/164 (34%), Positives = 77/164 (46%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY-NGT 985
I+ H+DHGKTTL+D L RK+Q + ++ GIT +E +G
Sbjct: 163 IMGHIDHGKTTLLDSL-------RKSQIV---------AQEAGGITQHIGAFRVELPSGE 206
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+I +DTPGHA F R + D V+L++ A +G M QT A K IV VN
Sbjct: 207 KITFLDTPGHAAFSAMRARGTMITDIVILVVAADDGVMKQTIESIELAKKAKVPIIVAVN 266
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQL--DFPVIYTSALHG 1087
K D+ A P+ V D +C E L + I+ SAL G
Sbjct: 267 KCDKPQADPQRVKQELAG-HDVIC---EDLGGEIQAIHVSALKG 306
Score = 49 (22.3 bits), Expect = 5.9e-21, Sum P(2) = 5.9e-21
Identities = 29/98 (29%), Positives = 44/98 (44%)
Query: 182 DINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTT 241
+++LD ++ D + E+ +E S AK + K+ EN +Q + A + T
Sbjct: 99 EVDLDELEPDTMLEEKWIKEAVKRSGMKYRWAK--LVETKVRENKDIQRQPPPDPAQLVT 156
Query: 242 PAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGA 279
A V I +D GK T L+ S LR S IV A
Sbjct: 157 RAPVVTIMGHIDHGK----TTLLDS--LRKSQIVAQEA 188
>RGD|1303046 [details] [associations]
symbol:Mtif2 "mitochondrial translational initiation factor 2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=TAS] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005525 "GTP binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=ISO;ISS;TAS] [GO:0006412
"translation" evidence=TAS] [GO:0006413 "translational initiation"
evidence=TAS] [GO:0006446 "regulation of translational initiation"
evidence=ISS] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISS] [GO:0043024 "ribosomal small subunit
binding" evidence=ISS] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PROSITE:PS01176 RGD:1303046 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0006446 GO:GO:0003924 GO:GO:0006184
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0043024
eggNOG:COG0532 HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 CTD:4528 GeneTree:ENSGT00550000074932
HOVERGEN:HBG006124 OMA:HIGAFTV OrthoDB:EOG43XV38 HAMAP:MF_00100_B
EMBL:BC079421 IPI:IPI00208974 RefSeq:NP_001004254.1
UniGene:Rn.160632 SMR:Q68FQ5 STRING:Q68FQ5
Ensembl:ENSRNOT00000005834 GeneID:305606 KEGG:rno:305606
UCSC:RGD:1303046 InParanoid:Q68FQ5 NextBio:654865
Genevestigator:Q68FQ5 Uniprot:Q68FQ5
Length = 727
Score = 739 (265.2 bits), Expect = 2.0e-95, Sum P(2) = 2.0e-95
Identities = 151/277 (54%), Positives = 201/277 (72%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFLDTPGH 126
R+P+VTIMGHVDHGKT+LLD +R+T V E GGITQHIGA+ V G ITFLDTPGH
Sbjct: 179 RSPVVTIMGHVDHGKTTLLDKLRETQVAAMEVGGITQHIGAFLVSLPSGEKITFLDTPGH 238
Query: 127 EAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLD 186
AF+AMRARGA+VTDIVVLVVAADDGVM QT E+I HAK +GVP+I+AINK DK D + +
Sbjct: 239 AAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAGVPIILAINKCDKTDADPE 298
Query: 187 RIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGV 246
++K++L++ V+ EEYGG + +SA TG + L E AE+LELKA T P +G
Sbjct: 299 KVKKELLAYDVVCEEYGGDVQAVHVSALTGKNLMALAEATIALAEMLELKADPTGPVEGT 358
Query: 247 IIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEI 306
+IES DKG+GPV T +IQ GTL+ I+VAG S+ ++R M +ENGK + EA PS+PV I
Sbjct: 359 VIESFTDKGRGPVTTAIIQRGTLKKGSILVAGKSWAKVRLMFDENGKTVNEAYPSMPVGI 418
Query: 307 QGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVK 343
G +P +G+E+ + +E +ARE+ +R+ + ++ K
Sbjct: 419 IGWRDLPSAGDEILEVQSEPRAREVVDWRKSEQKEEK 455
Score = 251 (93.4 bits), Expect = 2.0e-95, Sum P(2) = 2.0e-95
Identities = 61/203 (30%), Positives = 109/203 (53%)
Query: 361 KEKVK---NLL-IIIKTDVYGSREVLTESLKNL-STDKVKIQVIHNAVGNINESDINLAI 415
KEKV+ N+L IIIK DV GS E + L ++ + +++++H +G+I+E+D+ A
Sbjct: 506 KEKVERDSNVLPIIIKGDVDGSVEAILNLLDTYDASHECELELVHFGLGDISENDVTFAE 565
Query: 416 ASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGL 475
+I GFNV A ++ ++ A ++++ E++N +P + +E +G
Sbjct: 566 TFDGVIYGFNVDAGSAIQQSAAQKGVKIKLHKIIYHLIEDLQEELSNRLPYKVEEYPIGE 625
Query: 476 AEIRQVILVNKVSK---IAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKE 532
A I + + K +AGC + +G + R K +++RN +IW G L SLK KD+V
Sbjct: 626 ASILATFTITEGKKKVPVAGCRVQKGQLERQKKFKLIRNGQVIWKGSLTSLKHHKDDVLV 685
Query: 533 VKAGFECERLSRIENQIQRDISE 555
+K G +C LS E ++ + +
Sbjct: 686 IKTGVDCG-LSLDEENVEFKVGD 707
Score = 166 (63.5 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 55/161 (34%), Positives = 80/161 (49%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKTTL+D L R+ Q + A M+ I + G + S +G +
Sbjct: 185 IMGHVDHGKTTLLDKL-------RETQ-VAA--MEVGGITQHIGAFLVSLP-----SGEK 229
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGHA F R + D V+L++ A +G M QT + A G I+ +NK
Sbjct: 230 ITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAGVPIILAINK 289
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
D+++A PE V +D +C E D ++ SAL G
Sbjct: 290 CDKTDADPEKVKKELL-AYDVVCE-EYGGDVQAVHVSALTG 328
Score = 37 (18.1 bits), Expect = 7.4e-73, Sum P(2) = 7.4e-73
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 988 NIIDTPGHADFGGEVERILSMVD 1010
N++ D G VE IL+++D
Sbjct: 514 NVLPIIIKGDVDGSVEAILNLLD 536
>UNIPROTKB|E2R3A4 [details] [associations]
symbol:MTIF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0003924 GO:GO:0006184 GO:GO:0003743 InterPro:IPR009000
SUPFAM:SSF50447 KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 CTD:4528 GeneTree:ENSGT00550000074932 OMA:HIGAFTV
HAMAP:MF_00100_B EMBL:AAEX03007531 EMBL:AAEX03007532
RefSeq:XP_531830.2 Ensembl:ENSCAFT00000004524 GeneID:474600
KEGG:cfa:474600 NextBio:20850587 Uniprot:E2R3A4
Length = 727
Score = 718 (257.8 bits), Expect = 2.9e-95, Sum P(2) = 2.9e-95
Identities = 147/265 (55%), Positives = 193/265 (72%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFLDTPGH 126
R+P+VTIMGHVDHGKT+LLD +RKT V EAGGITQHIGA+ V G ITFLDTPGH
Sbjct: 179 RSPVVTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGERITFLDTPGH 238
Query: 127 EAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLD 186
AF+AMRARGA+VTDIV+LVVAADDGVM QT E+I HA+ + VP+++AINK DK + + +
Sbjct: 239 AAFSAMRARGAQVTDIVILVVAADDGVMKQTVESIQHARDAQVPIVLAINKCDKAEADPE 298
Query: 187 RIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGV 246
++K++L++ V+ E+YGG + ISA TG + L E AE+LELKA T P +G
Sbjct: 299 KVKKELLAYDVVCEDYGGDVQAVHISAVTGDNLMALAEATIALAEMLELKADPTGPVEGT 358
Query: 247 IIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEI 306
+IES DKG+GPV T +IQ GTLR I+VAG S+ ++R M +ENGK I EA PS+PV I
Sbjct: 359 VIESFTDKGRGPVTTAIIQRGTLRKGSILVAGKSWAKVRLMFDENGKPIQEAYPSMPVGI 418
Query: 307 QGLTKVPFSGEELFVILNEKKAREI 331
G +P +G+E+ + +E +AR +
Sbjct: 419 VGWRDLPSAGDEILEVESEGRARAV 443
Score = 271 (100.5 bits), Expect = 2.9e-95, Sum P(2) = 2.9e-95
Identities = 67/236 (28%), Positives = 124/236 (52%)
Query: 326 KKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKN--LLIIIKTDVYGSREVLT 383
+KARE + +++ K + K + + KE+ + L IIIK DV GS E +
Sbjct: 475 QKARE--KYGTLHWKERSFLKYQEKKEQKLLKPKEKEERDSPVLPIIIKGDVDGSVEAIV 532
Query: 384 ESLKNL-STDKVKIQVIHNAVGNINESDINLAIASKAIIIGFNVRADASTRKLAQXXXXX 442
+ + ++ + ++Q++H VG+++E+D+NLA +I GFNV A +K A
Sbjct: 533 DIMNTYDASHECELQLVHFGVGDVSENDVNLAETFHGVIYGFNVNAGNVIQKSAAKKGVK 592
Query: 443 XXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQVILVNKVSK---IAGCYILEGL 499
++++ E++ +P +EN +G A I V + K +AGC + +G
Sbjct: 593 IKLHKIIYRLIEDVQEELSFRLPCTVEENPIGEASILATFTVTEGKKKVPVAGCRVQKGQ 652
Query: 500 IRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECERLSRIENQIQRDISE 555
+ + K +++RN+++IW G L SLK KD++ +K+G +C LS E +I+ + +
Sbjct: 653 LEKQKKFKLIRNRDVIWKGSLTSLKHHKDDISVIKSGMDCG-LSLSEEKIEFKVGD 707
Score = 161 (61.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 61/187 (32%), Positives = 89/187 (47%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKTTL+D L RK Q + A M++ I + G + S +G R
Sbjct: 185 IMGHVDHGKTTLLDKL-------RKTQ-VAA--MEAGGITQHIGAFLVSLP-----SGER 229
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGHA F R + D V+L++ A +G M QT + A ++ +NK
Sbjct: 230 ITFLDTPGHAAFSAMRARGAQVTDIVILVVAADDGVMKQTVESIQHARDAQVPIVLAINK 289
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEA 1106
D++ A PE V +D +C + D ++ SA+ G +N A I L E
Sbjct: 290 CDKAEADPEKVKKELL-AYDVVCE-DYGGDVQAVHISAVTG---DNLMALAEATIALAEM 344
Query: 1107 I-LKYVP 1112
+ LK P
Sbjct: 345 LELKADP 351
>UNIPROTKB|F1SQK6 [details] [associations]
symbol:MTIF2 "Translation initiation factor IF-2"
species:9823 "Sus scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PROSITE:PS01176 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0003924 GO:GO:0006184 GO:GO:0003743 InterPro:IPR009000
SUPFAM:SSF50447 KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 CTD:4528 GeneTree:ENSGT00550000074932 OMA:HIGAFTV
HAMAP:MF_00100_B EMBL:CU915675 EMBL:FP326662 RefSeq:XP_003354867.2
UniGene:Ssc.22842 Ensembl:ENSSSCT00000009201 GeneID:100627723
KEGG:ssc:100627723 Uniprot:F1SQK6
Length = 727
Score = 714 (256.4 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 150/287 (52%), Positives = 201/287 (70%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFLDTPGH 126
R+P+V IMGHVDHGKT+LLD +RKT V E GGITQHIGA+ V G ITFLDTPGH
Sbjct: 179 RSPVVAIMGHVDHGKTTLLDQLRKTQVAAMEVGGITQHIGAFLVSLPSGEKITFLDTPGH 238
Query: 127 EAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLD 186
AF+AMRARGA+VTDI++LVVAADDGVM QT E+I HAK + VP+++AINK DK + + +
Sbjct: 239 AAFSAMRARGAQVTDIIILVVAADDGVMKQTVESIQHAKDAQVPIVLAINKCDKAEADPE 298
Query: 187 RIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGV 246
+ K++L++ V+ E+YGG + +SA TG + L E AE+LELKA T P +G
Sbjct: 299 KAKKELLAYDVVCEDYGGDVQAVHVSALTGDNMMALTEATVALAEMLELKADPTGPVEGT 358
Query: 247 IIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEI 306
+IES DKG+GPV T +IQ GTL+ I+VAG S+ ++R M +ENGK I EA PS+PV I
Sbjct: 359 VIESFTDKGRGPVTTAIIQRGTLKKGSILVAGKSWAKVRLMFDENGKTINEACPSMPVGI 418
Query: 307 QGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTE 353
G +P +G+E+ + +E +ARE+ +R+ + K SK+ L E
Sbjct: 419 IGWRDLPSAGDEILEVESEARAREVVDWRKYEQEQEK-SKEDLKLIE 464
Score = 259 (96.2 bits), Expect = 1.4e-93, Sum P(2) = 1.4e-93
Identities = 60/203 (29%), Positives = 110/203 (54%)
Query: 361 KEKVKN----LLIIIKTDVYGSREVLTESLKNL-STDKVKIQVIHNAVGNINESDINLAI 415
KEKV+ L IIIK DV GS E + + ++ + +++++H VG+I+E+D+NLA
Sbjct: 506 KEKVERDSDVLPIIIKGDVDGSLEAILNIMDTYDASHECELELVHFGVGDISENDVNLAE 565
Query: 416 ASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGL 475
+I GFNV A ++ A ++++ E+++ +P +E+++G
Sbjct: 566 TFNGVIYGFNVNASNVIQQSAAKKGVKIKLHKIIYRLIEDVQEELSSRLPCAVEEHIIGE 625
Query: 476 AEIRQVILVNKVSK---IAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKE 532
A I + + K +AGC + +G + + K +++RN ++IW G L SLK KD++
Sbjct: 626 ASILATFSITEGKKKIPVAGCRVQKGQLEKQKKFKLIRNGHVIWKGSLISLKHHKDDISV 685
Query: 533 VKAGFECERLSRIENQIQRDISE 555
+K G +C LS E +I+ + +
Sbjct: 686 IKTGMDCG-LSLDEEKIEFKVGD 707
Score = 160 (61.4 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 63/189 (33%), Positives = 91/189 (48%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AI+ HVDHGKTTL+D L RK Q + A M+ I + G + S +G
Sbjct: 184 AIMGHVDHGKTTLLDQL-------RKTQ-VAA--MEVGGITQHIGAFLVSLP-----SGE 228
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-V 1044
+I +DTPGHA F R + D ++L++ A +G M QT + A K PIV+ +
Sbjct: 229 KITFLDTPGHAAFSAMRARGAQVTDIIILVVAADDGVMKQTVESIQHA-KDAQVPIVLAI 287
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLF 1104
NK D++ A PE +D +C + D ++ SAL G +N A + L
Sbjct: 288 NKCDKAEADPEKAKKELL-AYDVVCE-DYGGDVQAVHVSALTG---DNMMALTEATVALA 342
Query: 1105 EAI-LKYVP 1112
E + LK P
Sbjct: 343 EMLELKADP 351
Score = 39 (18.8 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 17/75 (22%), Positives = 34/75 (45%)
Query: 722 EADKYYEAIIHLGITTETG-DIEGKII-----DFNKNIPNSIEIIEKILINFHGKISQIP 775
+ D EAI+++ T + + E +++ D ++N N E ++ F+ S +
Sbjct: 523 DVDGSLEAILNIMDTYDASHECELELVHFGVGDISENDVNLAETFNGVIYGFNVNASNVI 582
Query: 776 PMYSALKYKGIPLYK 790
+A K I L+K
Sbjct: 583 QQSAAKKGVKIKLHK 597
>MGI|MGI:1924034 [details] [associations]
symbol:Mtif2 "mitochondrial translational initiation factor
2" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000178 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PROSITE:PS01176
MGI:MGI:1924034 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0006446 GO:GO:0003924 GO:GO:0006184 GO:GO:0008135
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:BX284634
GO:GO:0043024 eggNOG:COG0532 HOGENOM:HOG000076906 KO:K02519
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156 CTD:4528
GeneTree:ENSGT00550000074932 HOVERGEN:HBG006124 OMA:HIGAFTV
OrthoDB:EOG43XV38 EMBL:AK136344 EMBL:AK146961 EMBL:BC016590
IPI:IPI00130227 RefSeq:NP_598528.2 UniGene:Mm.285429 PDB:2CRV
PDBsum:2CRV ProteinModelPortal:Q91YJ5 SMR:Q91YJ5 STRING:Q91YJ5
PhosphoSite:Q91YJ5 PaxDb:Q91YJ5 PRIDE:Q91YJ5
Ensembl:ENSMUST00000020749 Ensembl:ENSMUST00000093239 GeneID:76784
KEGG:mmu:76784 InParanoid:Q5M6W6 EvolutionaryTrace:Q91YJ5
NextBio:345795 Bgee:Q91YJ5 CleanEx:MM_MTIF2 Genevestigator:Q91YJ5
GermOnline:ENSMUSG00000020459 Uniprot:Q91YJ5
Length = 727
Score = 726 (260.6 bits), Expect = 1.7e-93, Sum P(2) = 1.7e-93
Identities = 150/277 (54%), Positives = 200/277 (72%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFLDTPGH 126
R+P+VT+MGHVDHGKT+LLD +R+T V E GGITQHIGA+ V G ITFLDTPGH
Sbjct: 179 RSPVVTVMGHVDHGKTTLLDKLRETQVAAMEVGGITQHIGAFLVSLPSGEKITFLDTPGH 238
Query: 127 EAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLD 186
AF+AMRARGA+VTDIVVLVVAADDGVM QT E+I HAK + VP+I+AINK DK D + +
Sbjct: 239 AAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAEVPIILAINKCDKTDADPE 298
Query: 187 RIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGV 246
++K++L++ V+ EEYGG + +SA TG + L E AEILELKA T P +G
Sbjct: 299 KVKKELLAYDVVCEEYGGDVQAVHVSALTGDNLMALAEATIALAEILELKADPTGPVEGT 358
Query: 247 IIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEI 306
+IES DKG+GPV T +IQ GTLR I+VAG S+ ++R + +ENGK + EA PS+PV I
Sbjct: 359 VIESFTDKGRGPVTTAIIQRGTLRKGSILVAGKSWAKVRLIFDENGKILNEAYPSMPVGI 418
Query: 307 QGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVK 343
G +P +G+E+ + +E +ARE+ +R+ + ++ K
Sbjct: 419 IGWRDLPSAGDEILEVESEPRAREVIEWRKSEQKEEK 455
Score = 246 (91.7 bits), Expect = 1.7e-93, Sum P(2) = 1.7e-93
Identities = 60/198 (30%), Positives = 107/198 (54%)
Query: 361 KEKVK---NLL-IIIKTDVYGSREVLTESLKNL-STDKVKIQVIHNAVGNINESDINLAI 415
KEKV+ N+L IIIK DV GS E + L ++ + +++++H +G+I+E+D+ A
Sbjct: 506 KEKVERQSNVLPIIIKGDVDGSVEAILNLLDTYDASHECELELVHFGLGDISENDVTFAE 565
Query: 416 ASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGL 475
+I GFNV A ++ ++ A ++++ E+++ +P +E +G
Sbjct: 566 TFDGVIYGFNVEAGSAIQQSAAQKGVKIKLHKIIYHLIEDLQEELSSRLPHTLEEYPIGE 625
Query: 476 AEIRQVILVNKVSK---IAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKE 532
A I V + K +AGC + +G + R K +++RN +IW G L SLK KD++
Sbjct: 626 ASILATFTVTEGKKKIPVAGCRVQKGQLERHKKFKLIRNGQVIWKGSLTSLKHHKDDISV 685
Query: 533 VKAGFECERLSRIENQIQ 550
+K G +C LS E +++
Sbjct: 686 IKTGMDCG-LSLDEEKVE 702
Score = 158 (60.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 61/187 (32%), Positives = 89/187 (47%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKTTL+D L R+ Q + A M+ I + G + S +G +
Sbjct: 185 VMGHVDHGKTTLLDKL-------RETQ-VAA--MEVGGITQHIGAFLVSLP-----SGEK 229
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGHA F R + D V+L++ A +G M QT + A I+ +NK
Sbjct: 230 ITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAEVPIILAINK 289
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEA 1106
D+++A PE V +D +C E D ++ SAL G +N A I L E
Sbjct: 290 CDKTDADPEKVKKELL-AYDVVCE-EYGGDVQAVHVSALTG---DNLMALAEATIALAEI 344
Query: 1107 I-LKYVP 1112
+ LK P
Sbjct: 345 LELKADP 351
Score = 37 (18.1 bits), Expect = 1.9e-71, Sum P(2) = 1.9e-71
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 988 NIIDTPGHADFGGEVERILSMVD 1010
N++ D G VE IL+++D
Sbjct: 514 NVLPIIIKGDVDGSVEAILNLLD 536
>UNIPROTKB|P46198 [details] [associations]
symbol:MTIF2 "Translation initiation factor IF-2,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0043024 "ribosomal small subunit
binding" evidence=IDA] [GO:0008135 "translation factor activity,
nucleic acid binding" evidence=IDA] [GO:0006446 "regulation of
translational initiation" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR000178 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PROSITE:PS01176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0006446
GO:GO:0003924 GO:GO:0006184 GO:GO:0008135 GO:GO:0003743
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0043024 eggNOG:COG0532
HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 EMBL:L37835 EMBL:BC150118
IPI:IPI00699678 PIR:S53707 RefSeq:NP_776818.1 UniGene:Bt.91408
PDB:3IZY PDBsum:3IZY ProteinModelPortal:P46198 SMR:P46198
STRING:P46198 PRIDE:P46198 Ensembl:ENSBTAT00000020573 GeneID:281923
KEGG:bta:281923 CTD:4528 GeneTree:ENSGT00550000074932
HOVERGEN:HBG006124 InParanoid:P46198 OMA:HIGAFTV OrthoDB:EOG43XV38
NextBio:20805811 Uniprot:P46198
Length = 727
Score = 711 (255.3 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 151/288 (52%), Positives = 204/288 (70%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFLDTPGH 126
R+P+VTIMGHVDHGKT+LLD +RKT V EAGGITQHIGA+ V G ITFLDTPGH
Sbjct: 179 RSPVVTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGEKITFLDTPGH 238
Query: 127 EAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLD 186
AF+AMRARG +VTDIV+LVVAADDGVM QT E+I HAK + VP+++AINK DK + + +
Sbjct: 239 AAFSAMRARGTQVTDIVILVVAADDGVMKQTVESIQHAKDAHVPIVLAINKCDKAEADPE 298
Query: 187 RIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGV 246
++K++L++ V+ E+YGG + +SA TG + L E AE+LELKA T +G
Sbjct: 299 KVKKELLAYDVVCEDYGGDVQAVHVSALTGENMMALAEATIALAEMLELKADPTGAVEGT 358
Query: 247 IIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEI 306
+IES DKG+GPV T +IQ GTLR I+VAG S+ ++R M +ENG+ + EA PS+PV I
Sbjct: 359 VIESFTDKGRGPVTTAIIQRGTLRKGSILVAGKSWAKVRLMFDENGRAVNEAYPSMPVGI 418
Query: 307 QGLTKVPFSGEELFVILNEKKAREIGLFR-----QGKFR-DVKLSKQK 348
G +P +G+E+ + +E +ARE+ +R Q K + D+KL ++K
Sbjct: 419 IGWRDLPSAGDEILEVESEPRAREVVDWRKYEQEQEKNKEDLKLIEEK 466
Score = 255 (94.8 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 65/222 (29%), Positives = 115/222 (51%)
Query: 338 KFRDVKLSKQKLHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNL-STDKVKI 396
K+R+ K +Q L E + D N L +I+K DV GS E + + ++ + ++
Sbjct: 493 KYRE-KRQQQPLKPKEKLERDSNV-----LPVIVKGDVDGSVEAILNVMDTYDASHECEL 546
Query: 397 QVIHNAVGNINESDINLAIASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEI 456
++H VG+I+E+D+NLA +I GFNV A ++LA +++
Sbjct: 547 DLVHFGVGDISENDVNLAETFHGVIYGFNVNAGNVIQQLAAKKGVKIKLHKIIYRLIEDL 606
Query: 457 KSEITNLIPLEKKENLLGLAEIRQVILVNKVSK---IAGCYILEGLIRRDSKIRILRNKN 513
+ E+++ +P +E+ +G A I + + K +AGC + +G I + K +++RN +
Sbjct: 607 QEELSSRLPCIVEEHPIGEASILATFSITEGKKKVPVAGCRVQKGQIEKQKKFKLIRNGH 666
Query: 514 IIWTGELDSLKRFKDNVKEVKAGFECERLSRIENQIQRDISE 555
+IW G L SLK KD+ VK G +C LS E +I+ + +
Sbjct: 667 VIWKGSLISLKHHKDDTSVVKTGMDCG-LSLDEEKIEFKVGD 707
Score = 169 (64.5 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 66/188 (35%), Positives = 92/188 (48%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKTTL+D L RK Q + A M++ I + G + S +G +
Sbjct: 185 IMGHVDHGKTTLLDKL-------RKTQ-VAA--MEAGGITQHIGAFLVSLP-----SGEK 229
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VN 1045
I +DTPGHA F R + D V+L++ A +G M QT + A K PIV+ +N
Sbjct: 230 ITFLDTPGHAAFSAMRARGTQVTDIVILVVAADDGVMKQTVESIQHA-KDAHVPIVLAIN 288
Query: 1046 KIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFE 1105
K D++ A PE V +D +C + D ++ SAL G EN A I L E
Sbjct: 289 KCDKAEADPEKVKKELL-AYDVVCE-DYGGDVQAVHVSALTG---ENMMALAEATIALAE 343
Query: 1106 AI-LKYVP 1112
+ LK P
Sbjct: 344 MLELKADP 351
Score = 38 (18.4 bits), Expect = 6.1e-70, Sum P(2) = 6.1e-70
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 988 NIIDTPGHADFGGEVERILSMVD 1010
N++ D G VE IL+++D
Sbjct: 514 NVLPVIVKGDVDGSVEAILNVMD 536
>TAIR|locus:2136098 [details] [associations]
symbol:AT4G11160 species:3702 "Arabidopsis thaliana"
[GO:0003743 "translation initiation factor activity"
evidence=IEA;ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0009165 "nucleotide biosynthetic process" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016926
"protein desumoylation" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0050665 "hydrogen
peroxide biosynthetic process" evidence=RCA] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR005225 Pfam:PF00009 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002687 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 TIGRFAMs:TIGR00487 OMA:HIGAFTV HAMAP:MF_00100_B
EMBL:BT015371 EMBL:BT015894 EMBL:AK175792 EMBL:AK176005
EMBL:AK176053 EMBL:AK176150 EMBL:AK220747 EMBL:AK221093
IPI:IPI00528166 RefSeq:NP_192854.2 UniGene:At.3295
ProteinModelPortal:Q67ZW2 SMR:Q67ZW2 STRING:Q67ZW2 PRIDE:Q67ZW2
EnsemblPlants:AT4G11160.1 GeneID:826717 KEGG:ath:AT4G11160
TAIR:At4g11160 InParanoid:Q67ZW2 PhylomeDB:Q67ZW2
ProtClustDB:CLSN2680956 Genevestigator:Q67ZW2 Uniprot:Q67ZW2
Length = 743
Score = 927 (331.4 bits), Expect = 2.6e-92, P = 2.6e-92
Identities = 202/491 (41%), Positives = 311/491 (63%)
Query: 63 AESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNV-VTNHG-SITF 120
+E L R P+VT+MGHVDHGKTSLLD +R T+V EAGGITQH+GA+ V + + G SITF
Sbjct: 213 SEILPRPPVVTVMGHVDHGKTSLLDALRNTSVAAREAGGITQHVGAFVVGMPDSGTSITF 272
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AF+ MRARGA VTDIVVLVVAADDGVMPQT EAIAHA+ + VP++VAINK DK
Sbjct: 273 LDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHARSANVPVVVAINKCDK 332
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
N +++K L SE + E+ GG + +SA G++KL E + LQA ++LKA V
Sbjct: 333 PGANPEKVKYQLTSEGIELEDIGGNVQAVEVSAAKSTGLDKLEEALLLQAVDMDLKARVD 392
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
PA+ ++E+RLDKG+GP+AT+++++GTL VV G +GR+R++ + GK A P
Sbjct: 393 GPAQAYVVEARLDKGRGPLATIIVKAGTLVRGQHVVIGCQWGRLRAIRDMIGKTTDRATP 452
Query: 301 SIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN 360
++PVEI+GL +P +G+++ V+ +E++AR + R+ K+ +L K + + E +
Sbjct: 453 AMPVEIEGLKGLPMAGDDVIVVESEERARMLSEGRKRKYEKDRLLKAEEARLEEAAARLE 512
Query: 361 KEKVKNLL-----IIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAI 415
E + + I++K+DV G+ + + ++L+ L++ +V + ++H+ VG I+ SD++LA
Sbjct: 513 TESEEGFVRVELPIVVKSDVQGTAQAVADALRTLNSPQVSVNIVHSGVGAISHSDLDLAQ 572
Query: 416 ASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGL 475
A A I+GFNV+ ++ A ++I + I P + + G
Sbjct: 573 ACGACIVGFNVKGGSTGNLSAAQGSVKVFHHRVIYHLLEDIGNLIVEKAPGVSEMEVSGE 632
Query: 476 AEIRQV--ILVNKVSK-----IAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKD 528
AE+ + IL + ++ IAGC +++G + R +R+LR+ +++ G SLKR K
Sbjct: 633 AEVLSIFKILGKRRTEEDGVNIAGCKVMDGRVCRSGLMRLLRSGEVVFEGSCASLKREKQ 692
Query: 529 NVKEVKAGFEC 539
+V++V G EC
Sbjct: 693 DVEQVGKGNEC 703
Score = 165 (63.1 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 67/232 (28%), Positives = 103/232 (44%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKT+L+D L +N ++ AR ++ I + G + S GT
Sbjct: 224 VMGHVDHGKTSLLDAL--------RNTSVAAR--EAGGITQHVGAFVVGMPDS----GTS 269
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGHA F R ++ D V+L++ A +G MPQT A +V +NK
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMPQTLEAIAHARSANVPVVVAINK 329
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEA 1106
D+ A PE V K T E ++ I + A E S A+ + L EA
Sbjct: 330 CDKPGANPEKV---------KYQLTSEGIELEDIGGNV---QAVEVSAAKSTGLDKLEEA 377
Query: 1107 IL-KYVPVH-KDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVI 1156
+L + V + K + P Q ++ G + + +G + Q VVI
Sbjct: 378 LLLQAVDMDLKARVDGPAQAYVVEARLDKGRGPLATIIVKAGTLVRGQHVVI 429
Score = 50 (22.7 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 734 GITTETGDI-EGK-IIDFNKNIPNSIEIIEKILIN 766
G+ +T DI EG +++ +K S+ +++ ILIN
Sbjct: 142 GLPGKTVDIFEGMTLLELSKRTGESVAVLQSILIN 176
Score = 37 (18.1 bits), Expect = 6.5e-07, Sum P(3) = 6.5e-07
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 1251 NRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRR 1294
+R+ + + +IG + + S EVSG E+ I RR
Sbjct: 603 HRVIYHLLEDIGNLIVEKAPGVSEMEVSGEAEVLSIFKILGKRR 646
>UNIPROTKB|P46199 [details] [associations]
symbol:MTIF2 "Translation initiation factor IF-2,
mitochondrial" species:9606 "Homo sapiens" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISS;IDA] [GO:0008135
"translation factor activity, nucleic acid binding" evidence=ISS]
[GO:0043024 "ribosomal small subunit binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000178 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PROSITE:PS01176
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 EMBL:CH471053
GO:GO:0006446 GO:GO:0003924 GO:GO:0006184 GO:GO:0008135
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0043024
EMBL:AC012358 eggNOG:COG0532 HOGENOM:HOG000076906 KO:K02519
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156 CTD:4528
HOVERGEN:HBG006124 OrthoDB:EOG43XV38 EMBL:L34600 EMBL:AF494407
EMBL:AF495546 EMBL:AF495543 EMBL:AF495544 EMBL:AF495545
IPI:IPI00005039 PIR:A55628 RefSeq:NP_001005369.1 RefSeq:NP_002444.2
UniGene:Hs.149894 ProteinModelPortal:P46199 SMR:P46199
DIP:DIP-27596N IntAct:P46199 MINT:MINT-88709 STRING:P46199
PhosphoSite:P46199 DMDM:223590069 PaxDb:P46199 PRIDE:P46199
DNASU:4528 Ensembl:ENST00000263629 Ensembl:ENST00000394600
Ensembl:ENST00000403721 GeneID:4528 KEGG:hsa:4528 UCSC:uc002ryn.3
GeneCards:GC02M055463 H-InvDB:HIX0200341 HGNC:HGNC:7441
HPA:HPA006021 MIM:603766 neXtProt:NX_P46199 PharmGKB:PA31243
InParanoid:P46199 OMA:VITKAGM PhylomeDB:P46199 ChiTaRS:MTIF2
GenomeRNAi:4528 NextBio:17478 ArrayExpress:P46199 Bgee:P46199
CleanEx:HS_MTIF2 Genevestigator:P46199 GermOnline:ENSG00000085760
Uniprot:P46199
Length = 727
Score = 708 (254.3 bits), Expect = 5.0e-91, Sum P(2) = 5.0e-91
Identities = 156/308 (50%), Positives = 209/308 (67%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFLDTPGH 126
R+P+VTIMGHVDHGKT+LLD RKT V E GGITQHIGA+ V G ITFLDTPGH
Sbjct: 179 RSPVVTIMGHVDHGKTTLLDKFRKTQVAAVETGGITQHIGAFLVSLPSGEKITFLDTPGH 238
Query: 127 EAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLD 186
AF+AMRARGA+VTDIVVLVVAADDGVM QT E+I HAK + VP+I+A+NK DK + + +
Sbjct: 239 AAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAQVPIILAVNKCDKAEADPE 298
Query: 187 RIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGV 246
++K++L++ V+ E+YGG + +SA TG + L E AE+LELKA P +G
Sbjct: 299 KVKKELLAYDVVCEDYGGDVQAVPVSALTGDNLMALAEATVALAEMLELKADPNGPVEGT 358
Query: 247 IIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEI 306
+IES DKG+G V T +IQ GTLR ++VAG + ++R M +ENGK I EA PS+PV I
Sbjct: 359 VIESFTDKGRGLVTTAIIQRGTLRKGSVLVAGKCWAKVRLMFDENGKTIDEAYPSMPVGI 418
Query: 307 QGLTKVPFSGEELFVILNEKKAREIGLFR-----QGKFR-DVKLSKQKLHKTENMFNDIN 360
G +P +GEE+ + +E +ARE+ +R Q K + D+K+ ++K K +
Sbjct: 419 TGWRDLPSAGEEILEVESEPRAREVVDWRKYEQEQEKGQEDLKIIEEK-RKEHKEAHQKA 477
Query: 361 KEKVKNLL 368
+EK +LL
Sbjct: 478 REKYGHLL 485
Score = 241 (89.9 bits), Expect = 5.0e-91, Sum P(2) = 5.0e-91
Identities = 56/200 (28%), Positives = 107/200 (53%)
Query: 361 KEKVKNLL-IIIKTDVYGSREVLTESLKNL-STDKVKIQVIHNAVGNINESDINLAIASK 418
+E+ N+L +IIK DV GS E + + ++ + +++++H VG+++ +D+NLA
Sbjct: 509 RERDSNVLSVIIKGDVDGSVEAILNIIDTYDASHECELELVHFGVGDVSANDVNLAETFD 568
Query: 419 AIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEI 478
+I GFNV A ++ A ++++ E+++ +P +E+ +G A I
Sbjct: 569 GVIYGFNVNAGNVIQQSAAKKGVKIKLHKIIYRLVEDLQEELSSRLPCAVEEHPVGEASI 628
Query: 479 RQVILVNKVSK---IAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKA 535
V + K +AGC + +G + + K ++ RN ++IW G L SLK KD++ VK
Sbjct: 629 LATFSVTEGKKKVPVAGCRVQKGQLEKQKKFKLTRNGHVIWKGSLTSLKHHKDDISIVKT 688
Query: 536 GFECERLSRIENQIQRDISE 555
G +C LS E+ ++ + +
Sbjct: 689 GMDCG-LSLDEDNMEFQVGD 707
Score = 155 (59.6 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 54/161 (33%), Positives = 78/161 (48%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKTTL+D FRK Q + A +++ I + G + S +G +
Sbjct: 185 IMGHVDHGKTTLLDK-------FRKTQ-VAA--VETGGITQHIGAFLVSLP-----SGEK 229
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGHA F R + D V+L++ A +G M QT + A I+ VNK
Sbjct: 230 ITFLDTPGHAAFSAMRARGAQVTDIVVLVVAADDGVMKQTVESIQHAKDAQVPIILAVNK 289
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
D++ A PE V +D +C + D + SAL G
Sbjct: 290 CDKAEADPEKVKKELL-AYDVVCE-DYGGDVQAVPVSALTG 328
Score = 40 (19.1 bits), Expect = 7.8e-70, Sum P(2) = 7.8e-70
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 988 NIIDTPGHADFGGEVERILSMVD 1010
N++ D G VE IL+++D
Sbjct: 514 NVLSVIIKGDVDGSVEAILNIID 536
>CGD|CAL0002630 [details] [associations]
symbol:IFM1 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003743 "translation initiation
factor activity" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=IEA]
InterPro:IPR000178 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144
Pfam:PF04760 CGD:CAL0002630 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0005622 GO:GO:0003743
InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532 KO:K02519
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156
TIGRFAMs:TIGR00487 HAMAP:MF_00100_B EMBL:AACQ01000061
EMBL:AACQ01000060 RefSeq:XP_716922.1 RefSeq:XP_716989.1
RefSeq:XP_888902.1 ProteinModelPortal:Q5A5B3 STRING:Q5A5B3
GeneID:3641389 GeneID:3641439 GeneID:3704045 KEGG:cal:CaO19.12634
KEGG:cal:CaO19.5167 KEGG:cal:CaO19_5167 Uniprot:Q5A5B3
Length = 767
Score = 718 (257.8 bits), Expect = 2.9e-89, Sum P(2) = 2.9e-89
Identities = 160/351 (45%), Positives = 230/351 (65%)
Query: 1 MSVKSSVVIKNLMKLG-QMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNK 59
M V + V K L LG + + N +LD+E A ++ +E G + + + F
Sbjct: 172 MHVPLNDVFKKLEGLGFEDIRHNYILDRENAAMVADEYGIEVEVVEESGDDLF-----PA 226
Query: 60 NITAESLV-RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS- 117
I + LV R P+VTIMGHVDHGKT++LDY+RK+++V E GGITQHIGA++V T
Sbjct: 227 PIKPDLLVERPPVVTIMGHVDHGKTTILDYLRKSSIVSQEFGGITQHIGAFSVTTPKSKK 286
Query: 118 -ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
ITFLDTPGH AF MR RGA +TDIV+LVVAADD VMPQT EAI HAK SGVP+IVA+N
Sbjct: 287 RITFLDTPGHAAFLKMRERGAIITDIVILVVAADDSVMPQTIEAIKHAKKSGVPMIVAVN 346
Query: 177 KIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELK 236
K DK +N++++ DL S V E+YGG + + +S KTG+ ++KL E + +E+ + K
Sbjct: 347 KCDKPGVNVEKVLGDLSSHGVDIEDYGGETQTVQVSGKTGLNMDKLEEAVITLSELCDFK 406
Query: 237 A-PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNI 295
A P A+G IIES + KG G VATVL++ G+L+ DI+VAG ++ +IR M +EN K +
Sbjct: 407 AEPKGIHAEGWIIESEVVKGMGNVATVLVRRGSLKNGDIIVAGKTFCKIRGMKDENNKMV 466
Query: 296 LEAGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSK 346
AGPS PV I G +P SG+++ +E+ A+++ +R + ++++ ++
Sbjct: 467 KIAGPSTPVRIWGWKDLPDSGDQILQANSEQIAKKVIDYRITRSQEIQATR 517
Score = 214 (80.4 bits), Expect = 2.9e-89, Sum P(2) = 2.9e-89
Identities = 65/225 (28%), Positives = 108/225 (48%)
Query: 323 LNEKKAREIG-LFRQGKFRDVK---LSKQKLHKTENMFNDINKEKVKNLLIIIKTDVYGS 378
+N K+ EI R K ++K L L K E +K+ +K I+++DV+GS
Sbjct: 522 INVKRLEEIKEAERLEKIAELKKAGLDASTLEKAEQ-----DKKTIK-CNYIVRSDVFGS 575
Query: 379 REVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAIIIGFNVRADASTRKLAQX 438
E + ES+ L ++V+ VI + G +SDI LA A I FN++ A
Sbjct: 576 AEAIKESIDGLGNEEVESVVISHEAGPPTDSDIELAKTFGATIFCFNMKVPKPIAVRADK 635
Query: 439 XXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQVILVN----KVSKIAGCY 494
+++ E+++ + + LG +I+ V +V KV KIAGC
Sbjct: 636 EKVKVKEHNIIYRLIEDVTDELSSHLKPRVEIKTLGEVDIKDVFVVTVKKQKV-KIAGCK 694
Query: 495 ILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFEC 539
+ G I+ S++++LRN ++ G+L SLK KD++ E G +C
Sbjct: 695 VTTGSIKSSSQVKVLRNGQEVYCGKLSSLKHVKDDITEATKGKDC 739
Score = 149 (57.5 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 47/132 (35%), Positives = 67/132 (50%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKTT++D+L RK+ ++ + I + G FS + + R
Sbjct: 242 IMGHVDHGKTTILDYL-------RKSSIVS---QEFGGITQHIGA--FS--VTTPKSKKR 287
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGHA F ER + D V+L++ A + MPQT + A K G IV VNK
Sbjct: 288 ITFLDTPGHAAFLKMRERGAIITDIVILVVAADDSVMPQTIEAIKHAKKSGVPMIVAVNK 347
Query: 1047 IDRSNARPEWVV 1058
D+ E V+
Sbjct: 348 CDKPGVNVEKVL 359
Score = 42 (19.8 bits), Expect = 4.0e-71, Sum P(2) = 4.0e-71
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 497 EGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECERLSRI 545
E + ++ RI R++ I T +++ + NVK ++ E ERL +I
Sbjct: 496 EQIAKKVIDYRITRSQEIQATRDIEDI-----NVKRLEEIKEAERLEKI 539
>FB|FBgn0039588 [details] [associations]
symbol:CG12413 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] InterPro:IPR000795 InterPro:IPR005225
Pfam:PF00009 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924
GO:GO:0006184 InterPro:IPR009000 SUPFAM:SSF50447 HSSP:P32324
eggNOG:COG0532 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 EMBL:AY119138 ProteinModelPortal:Q8MS23 SMR:Q8MS23
STRING:Q8MS23 PaxDb:Q8MS23 PRIDE:Q8MS23 UCSC:CG12413-RA
FlyBase:FBgn0039588 InParanoid:Q8MS23 OrthoDB:EOG46DJHR
ArrayExpress:Q8MS23 Bgee:Q8MS23 Uniprot:Q8MS23
Length = 696
Score = 655 (235.6 bits), Expect = 2.3e-84, Sum P(2) = 2.3e-84
Identities = 132/289 (45%), Positives = 193/289 (66%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFLDTPGH 126
R P+VT+MGHVDHGKT+LLD +R +V EAGGITQHIGA+ V +G +TFLDTPGH
Sbjct: 161 RPPVVTVMGHVDHGKTTLLDSLRGADVAAGEAGGITQHIGAFTVTLENGERVTFLDTPGH 220
Query: 127 EAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLD 186
AF+AMRARGA TDI+VLVVAA+DGVM QTRE I AK + VP+IVA+NKIDK + N+
Sbjct: 221 AAFSAMRARGAVATDIIVLVVAAEDGVMAQTREVIQLAKEAQVPIIVALNKIDKPEANIK 280
Query: 187 RIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGV 246
+ K++L + EE+GG I ISA G + L E +S QA ++ LKA T +G+
Sbjct: 281 KSKRELAQMGLALEEHGGDVQVIPISALKGTNLELLAEAVSTQATLMGLKADPTGLVEGI 340
Query: 247 IIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEI 306
++ES+ D +G ++T ++ GTLR ++++G ++ ++R + + NG+ + EA P PVEI
Sbjct: 341 VVESKTDPRRGKLSTAIVSRGTLRKGSVLLSGLAHAKVRGLFDHNGQPLSEAPPDTPVEI 400
Query: 307 QGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKL--SKQKLHKTE 353
G ++P +G+ + + EKKA + +R+ + + K+ S ++ K E
Sbjct: 401 LGWRELPLAGDLILEVETEKKAHAVLKYREHESQQEKIESSSDEIRKKE 449
Score = 232 (86.7 bits), Expect = 2.3e-84, Sum P(2) = 2.3e-84
Identities = 55/186 (29%), Positives = 99/186 (53%)
Query: 358 DINKEKVKNLLIIIKTDVYGSREVLTESLKNL-STDKVKIQVIHNAVGNINESDINLAIA 416
D N+ K + + +IIK DV+GS E + + L+ S + ++ ++H VGN+ E D+ LA A
Sbjct: 481 DENEGKPR-VSVIIKGDVHGSVEAILDVLETYNSNESCRLDIVHYGVGNVTEGDLELAKA 539
Query: 417 SKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLA 476
AII F V T +L ++K ++++ +P + E +LG A
Sbjct: 540 FHAIIYAFAVE----TPQLKAAKEVNIRSYNIIYRLIDDLKEQLSSKLPPVEVEEVLGEA 595
Query: 477 EIRQVILVNKVSK---IAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEV 533
+ Q L+N+ K +AGC +G++++ K R+LR+ +++ G L+S++ K+ V +
Sbjct: 596 NVLQNFLINEGRKEVPVAGCRCTKGVLKKAQKFRLLRDGEVVYDGPLESMRHLKNEVDTI 655
Query: 534 KAGFEC 539
K EC
Sbjct: 656 KKDVEC 661
Score = 155 (59.6 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 55/162 (33%), Positives = 81/162 (50%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ HVDHGKTTL+D L + ++ A ++ I + G F+ ++E NG R
Sbjct: 167 VMGHVDHGKTTLLDSL--------RGADVAAG--EAGGITQHIGA--FT--VTLE-NGER 211
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
+ +DTPGHA F R D ++L++ A +G M QTR V + A + IV +NK
Sbjct: 212 VTFLDTPGHAAFSAMRARGAVATDIIVLVVAAEDGVMAQTREVIQLAKEAQVPIIVALNK 271
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQL-DFPVIYTSALHG 1087
ID+ A + + +L A EE D VI SAL G
Sbjct: 272 IDKPEAN---IKKSKRELAQMGLALEEHGGDVQVIPISALKG 310
>SGD|S000005383 [details] [associations]
symbol:IFM1 "Mitochondrial translation initiation factor 2"
species:4932 "Saccharomyces cerevisiae" [GO:0003924 "GTPase
activity" evidence=IEA;IDA] [GO:0003743 "translation initiation
factor activity" evidence=IEA;ISA;IDA] [GO:0006413 "translational
initiation" evidence=IEA;ISA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0070124 "mitochondrial translational initiation"
evidence=IC] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032543
"mitochondrial translation" evidence=IMP] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IMP;IDA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR005225 InterPro:IPR006847 Pfam:PF00009 Pfam:PF04760
PROSITE:PS01176 SGD:S000005383 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 EMBL:BK006948 GO:GO:0003924 GO:GO:0070124
GO:GO:0003743 GO:GO:0000049 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0532 HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487
GeneTree:ENSGT00550000074932 OrthoDB:EOG405W8V EMBL:X58379
EMBL:Z74765 PIR:S66706 RefSeq:NP_014619.1 ProteinModelPortal:P25038
SMR:P25038 STRING:P25038 PaxDb:P25038 PeptideAtlas:P25038
PRIDE:P25038 EnsemblFungi:YOL023W GeneID:854135 KEGG:sce:YOL023W
CYGD:YOL023w OMA:ANVAMIV NextBio:975863 Genevestigator:P25038
GermOnline:YOL023W Uniprot:P25038
Length = 676
Score = 626 (225.4 bits), Expect = 3.8e-81, Sum P(2) = 3.8e-81
Identities = 148/374 (39%), Positives = 236/374 (63%)
Query: 8 VIKNLMKLG-QMVTINQVLDQETAMILVEE----MGHVAHASKLNDPESFLLNEYNKNIT 62
+IK+L LG + +T +L +E ++++E + +++ ++ L++ L + N +
Sbjct: 82 LIKDLTALGFENITTTYILSKEYVELILQEYNFALPNLSTSTNLDNVYDELKSPVNPKLL 141
Query: 63 AESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVT-NHGS-ITF 120
+ RAP+VTIMGHVDHGKT+++DY+RK++VV E GGITQHIGA+ + G ITF
Sbjct: 142 TK---RAPVVTIMGHVDHGKTTIIDYLRKSSVVAQEHGGITQHIGAFQITAPKSGKKITF 198
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
LDTPGH AF MR RGA +TDI+VLVV+ +D +MPQT EAI HAK SG +I+AI KID+
Sbjct: 199 LDTPGHAAFLKMRERGANITDIIVLVVSVEDSLMPQTLEAIKHAKNSGNEMIIAITKIDR 258
Query: 181 L------DINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILE 234
+ + ++++ DLI + + E+ GG I ISAKTG ++ L E+I L +E+++
Sbjct: 259 IPQPKEREKKIEKVINDLIVQGIPVEKIGGDVQVIPISAKTGENMDLLEESIVLLSEVMD 318
Query: 235 LKAPVT--TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENG 292
++A + T A+G IIES++ K G VATVL++ GTL+ I++ G ++ +I++++++ G
Sbjct: 319 IRAENSPKTIAEGWIIESQVKKQVGNVATVLVKKGTLQKGKILICGNTFCKIKNLIDDKG 378
Query: 293 KNILEAGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSK--QKLH 350
IL+A PS E+ G VP G+E+ + +E A++ RQ K S +KL+
Sbjct: 379 IPILKATPSYATEVLGWKDVPHVGDEVIQVKSEAIAKKFISKRQDLIEVQKNSSIVEKLN 438
Query: 351 KTENMFND--INKE 362
+ + + +NKE
Sbjct: 439 EERALAKEQHLNKE 452
Score = 231 (86.4 bits), Expect = 3.8e-81, Sum P(2) = 3.8e-81
Identities = 59/207 (28%), Positives = 115/207 (55%)
Query: 340 RDVKLSKQKLHKTENMFNDINKEKVKNLL-IIIKTDVYGSREVLTESLKNLSTDKVKIQV 398
++ L+K+ H EN + + L+ IIK DV GS E ++ES+ +L D+V+ V
Sbjct: 445 KEQHLNKELEH--ENTVQEHEQNTGPKLINYIIKCDVSGSAEAVSESISSLGNDEVRCNV 502
Query: 399 IHNAVGNINESDINLAIASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKS 458
I ++VG ESD+ +A +++ I+ FN+ + + + +++
Sbjct: 503 ISSSVGIPTESDLKMAQITESTILCFNL-GNLPSEVINNRAGIKIKQYNVIYKLIEDVTE 561
Query: 459 EIT-NLIPLEKKENLLGLAEIRQVI---LVNKVSKIAGCYILEGLIRRDSKIRILR--NK 512
+T NL P+ +K+ ++ ++R+ L K+ +IAGC + G+I+++S ++++R N+
Sbjct: 562 TLTENLKPIFEKK-IVSTVDVRETFDFRLKKKIIRIAGCKVNNGVIKKNSLVQVVRGPNE 620
Query: 513 NIIWTGELDSLKRFKDNVKEVKAGFEC 539
++I+ G++ +LK KD+V EV G EC
Sbjct: 621 DVIFDGKISTLKHNKDDVAEVSKGHEC 647
Score = 148 (57.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 40/123 (32%), Positives = 64/123 (52%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKTT+ID+L + S +++ I I + +I + +G +
Sbjct: 150 IMGHVDHGKTTIIDYLRKSSVVAQEHGGITQHI-GAFQITAPK-------------SGKK 195
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGHA F ER ++ D ++L++ + MPQT + A G + I+ + K
Sbjct: 196 ITFLDTPGHAAFLKMRERGANITDIIVLVVSVEDSLMPQTLEAIKHAKNSGNEMIIAITK 255
Query: 1047 IDR 1049
IDR
Sbjct: 256 IDR 258
>POMBASE|SPBC1271.15c [details] [associations]
symbol:SPBC1271.15c "mitochondrial translation
initiation factor IF-2Mt (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=ISO]
[GO:0003743 "translation initiation factor activity" evidence=ISO]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005525 "GTP
binding" evidence=IC] [GO:0005739 "mitochondrion" evidence=ISO;IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144 Pfam:PF04760
PROSITE:PS01176 PomBase:SPBC1271.15c GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 EMBL:CU329671 GO:GO:0003924
GO:GO:0032543 GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0532 HOGENOM:HOG000076906 KO:K02519 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 TIGRFAMs:TIGR00487 PIR:T39351
RefSeq:NP_595135.1 ProteinModelPortal:O59683 STRING:O59683
EnsemblFungi:SPBC1271.15c.1 GeneID:2540181 KEGG:spo:SPBC1271.15c
OMA:NISREVI OrthoDB:EOG405W8V NextBio:20801313 Uniprot:O59683
Length = 686
Score = 820 (293.7 bits), Expect = 9.7e-81, P = 9.7e-81
Identities = 205/558 (36%), Positives = 313/558 (56%)
Query: 1 MSVKSSVVIKNLMKLG-QMVTINQVLDQETAMILVEEMGH-VAHASKLNDPESFLLNEYN 58
+ + + ++++L +LG + V ++ E + +L EE G V A+ + P LN
Sbjct: 105 LQIPTRRILRDLNRLGIKDVFPEYLITYEYSSLLAEEYGFDVQEAAAYSAPSPKSLNS-K 163
Query: 59 KNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS- 117
K+ +R P+VT+MGHVDHGKT+LLD RK+ + +E GGITQ IGA+ V + GS
Sbjct: 164 KD---SGPLRPPVVTLMGHVDHGKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSK 220
Query: 118 -ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
ITFLDTPGH AF AMR RGA + DIVVLVVA DDGV PQT EAI H + + VP++VA+
Sbjct: 221 FITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDGVKPQTVEAIKHIQSADVPVVVALT 280
Query: 177 KIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELK 236
K D+ + +I + L++ + E GG + I ISAKTG GI +L I AEI+E++
Sbjct: 281 KSDRPGTPIHKIYEQLLNNGIQVEALGGETQIIPISAKTGKGIPELEAAILTLAEIMEIR 340
Query: 237 APVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNIL 296
A P +G I+ES + KG G ATV+++ GT++ +VAG S+ ++RS+++ N K+I
Sbjct: 341 ASPRDPFQGWIVESSVTKGVGSSATVVVKRGTVKKGMYLVAGKSWCKVRSLVDVNKKSIK 400
Query: 297 EAGPSIPVEIQGLTKVPFSGEELFVILNEKKAREI--GLFRQGK---FRDVKLSKQK--- 348
+ P ++ G +P +G+ + + +E +A+ I ++RQ F ++ S+ +
Sbjct: 401 QVLPGQAAQVYGWKDLPIAGDLAYEVKSESEAKRILSDIYRQSNEQNFYELAESQNEQRV 460
Query: 349 --LHKTENMFNDINKEKV--KNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVG 404
L ++ I +E K+ II K + GS E L++ LK L KVK +V++ VG
Sbjct: 461 SALAAKKSGPAAIQEETSVSKSFNIIAKCEDTGSMEALSDYLKPLQFGKVKSRVLYTGVG 520
Query: 405 NINESDINLAIASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLI 464
+ E+DI A S AIII F V +T +LA+ +++ +
Sbjct: 521 PVTETDIERAETSDAIIISFGVSVPKATFRLAEKHNVKLLFHNVIYHLMDDVRKLFALRL 580
Query: 465 PLEKKENLLGLAEIRQVILVNK---VSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELD 521
P + + G A I + + V +AGC + G I + KIR++RN IIW+GE+D
Sbjct: 581 PPILVQRVTGEAIISAIFDIKAKRAVVHVAGCRVTNGTIEKSHKIRLVRNDKIIWSGEID 640
Query: 522 SLKRFKDNVKEVKAGFEC 539
SLK K+ V +K G EC
Sbjct: 641 SLKHLKEEVTSIKKGREC 658
>UNIPROTKB|J9P9B1 [details] [associations]
symbol:MTIF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
InterPro:IPR009000 SUPFAM:SSF50447 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 GeneTree:ENSGT00550000074932
EMBL:AAEX03007531 EMBL:AAEX03007532 Ensembl:ENSCAFT00000045484
Uniprot:J9P9B1
Length = 673
Score = 718 (257.8 bits), Expect = 1.0e-80, Sum P(2) = 1.0e-80
Identities = 147/265 (55%), Positives = 193/265 (72%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFLDTPGH 126
R+P+VTIMGHVDHGKT+LLD +RKT V EAGGITQHIGA+ V G ITFLDTPGH
Sbjct: 179 RSPVVTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGERITFLDTPGH 238
Query: 127 EAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLD 186
AF+AMRARGA+VTDIV+LVVAADDGVM QT E+I HA+ + VP+++AINK DK + + +
Sbjct: 239 AAFSAMRARGAQVTDIVILVVAADDGVMKQTVESIQHARDAQVPIVLAINKCDKAEADPE 298
Query: 187 RIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGV 246
++K++L++ V+ E+YGG + ISA TG + L E AE+LELKA T P +G
Sbjct: 299 KVKKELLAYDVVCEDYGGDVQAVHISAVTGDNLMALAEATIALAEMLELKADPTGPVEGT 358
Query: 247 IIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEI 306
+IES DKG+GPV T +IQ GTLR I+VAG S+ ++R M +ENGK I EA PS+PV I
Sbjct: 359 VIESFTDKGRGPVTTAIIQRGTLRKGSILVAGKSWAKVRLMFDENGKPIQEAYPSMPVGI 418
Query: 307 QGLTKVPFSGEELFVILNEKKAREI 331
G +P +G+E+ + +E +AR +
Sbjct: 419 VGWRDLPSAGDEILEVESEGRARAV 443
Score = 161 (61.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 61/187 (32%), Positives = 89/187 (47%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+ HVDHGKTTL+D L RK Q + A M++ I + G + S +G R
Sbjct: 185 IMGHVDHGKTTLLDKL-------RKTQ-VAA--MEAGGITQHIGAFLVSLP-----SGER 229
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGHA F R + D V+L++ A +G M QT + A ++ +NK
Sbjct: 230 ITFLDTPGHAAFSAMRARGAQVTDIVILVVAADDGVMKQTVESIQHARDAQVPIVLAINK 289
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEA 1106
D++ A PE V +D +C + D ++ SA+ G +N A I L E
Sbjct: 290 CDKAEADPEKVKKELL-AYDVVCE-DYGGDVQAVHISAVTG---DNLMALAEATIALAEM 344
Query: 1107 I-LKYVP 1112
+ LK P
Sbjct: 345 LELKADP 351
Score = 133 (51.9 bits), Expect = 1.0e-80, Sum P(2) = 1.0e-80
Identities = 39/149 (26%), Positives = 74/149 (49%)
Query: 326 KKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKN--LLIIIKTDVYGSREVLT 383
+KARE + +++ K + K + + KE+ + L IIIK DV GS E +
Sbjct: 475 QKARE--KYGTLHWKERSFLKYQEKKEQKLLKPKEKEERDSPVLPIIIKGDVDGSVEAIV 532
Query: 384 ESLKNL-STDKVKIQVIHNAVGNINESDINLAIASKAIIIGFNVRADASTRKLAQXXXXX 442
+ + ++ + ++Q++H VG+++E+D+NLA +I GFNV A +K A
Sbjct: 533 DIMNTYDASHECELQLVHFGVGDVSENDVNLAETFHGVIYGFNVNAGNVIQKSAAKKGVK 592
Query: 443 XXXXXXXXXXXKEIKSEITNLIPLEKKEN 471
++++ E++ +P +EN
Sbjct: 593 IKLHKIIYRLIEDVQEELSFRLPCTVEEN 621
>ASPGD|ASPL0000014076 [details] [associations]
symbol:AN10535 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0003743 "translation initiation
factor activity" evidence=IEA] InterPro:IPR000178
InterPro:IPR000795 InterPro:IPR001876 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006847 Pfam:PF00009 Pfam:PF03144
Pfam:PF04760 SMART:SM00547 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0008270 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
EMBL:BN001302 GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156
TIGRFAMs:TIGR00487 HOGENOM:HOG000076907 ProteinModelPortal:C8V429
EnsemblFungi:CADANIAT00004407 Uniprot:C8V429
Length = 1062
Score = 791 (283.5 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 193/500 (38%), Positives = 295/500 (59%)
Query: 1 MSVKSSVVIKNLMKLG-QMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNE-YN 58
+ ++ + +++ + ++G + V+ + VLD ETA ++ E G+ + + E +
Sbjct: 558 VGMRPAQLVERMEEMGFEDVSYSHVLDAETAGLIAAEFGYEPIVDTGAEQDLTAAPEPED 617
Query: 59 KNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS- 117
K+I R P+VTIMGHVDHGKT++LD++RK++VV SE GGITQHIGA++V G
Sbjct: 618 KSIWPS---RPPVVTIMGHVDHGKTTILDWLRKSSVVASEHGGITQHIGAFSVTMPSGKK 674
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
ITFLDTPGH AF MR RGA VTDIVVLVVAADD V PQT EAI HA + VP+IVA++K
Sbjct: 675 ITFLDTPGHAAFLDMRRRGADVTDIVVLVVAADDSVKPQTVEAIKHATSAKVPIIVAMSK 734
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
IDK IN +R+KQDL S + E+YGG I +S KTG G+ +L E I +E+L+ +A
Sbjct: 735 IDKEGINPERVKQDLSSHGIHVEDYGGDVQAIGVSGKTGQGMLELEEAIITLSEVLDHRA 794
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILE 297
+G +IE+ K G VATVLI+ GTLR DI+VAG ++ R+R++ NE G +I E
Sbjct: 795 DPDGFVEGWVIEAST-KSYGRVATVLIRRGTLRPGDILVAGNTWARVRTLRNEAGVSISE 853
Query: 298 AGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSK----------- 346
A P +PVEI G + P +G EL +E+ A+++ +R + +L +
Sbjct: 854 ATPGMPVEIDGWRENPTAGTELLQAEDEQHAKDVVEYRVEREETQRLGQDTAAINEARRD 913
Query: 347 --QKLHKTENMFNDINKEKV---KNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHN 401
+K K + ++ +EK+ K + ++K DV+GS E + S+ + ++V +V+ +
Sbjct: 914 MIEKRRKEASEEEELTEEKLSGPKPINFVVKADVHGSAEAVENSITAIGNNEVYAKVLRS 973
Query: 402 AVGNINESDINLAIASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEIT 461
VG I+ESDI LA A+ I+ FN+ D + ++AQ ++K ++
Sbjct: 974 EVGPISESDIELAAAANGHIVCFNMPIDTTMSRMAQNLGVNIMDHNIIYKLVDDVKDTLS 1033
Query: 462 NLIPLEKKENLLGLAEIRQV 481
+ + + G AE+ ++
Sbjct: 1034 EQLAPSITKRVTGGAEVGKI 1053
Score = 39 (18.8 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 950 RKNQNINARIMDSNEIEK 967
R QN+ IMD N I K
Sbjct: 1006 RMAQNLGVNIMDHNIIYK 1023
Score = 37 (18.1 bits), Expect = 3.5e-80, Sum P(3) = 3.5e-80
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 1249 IKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
+K+ L ++ +I RVT I+ +S +G
Sbjct: 1028 VKDTLSEQLAPSITKRVTGGAEVGKIFGISLKG 1060
>WB|WBGene00009771 [details] [associations]
symbol:F46B6.6 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015093 "ferrous iron transmembrane
transporter activity" evidence=IEA] [GO:0015684 "ferrous iron
transport" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006576
"cellular biogenic amine metabolic process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0006898 GO:GO:0040010
GO:GO:0003924 GO:GO:0006184 InterPro:IPR009000 SUPFAM:SSF50447
HSSP:O26359 eggNOG:COG0532 HOGENOM:HOG000076906 KO:K02519
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156
GeneTree:ENSGT00550000074932 OMA:VITKAGM EMBL:Z70780 PIR:T22288
RefSeq:NP_001023936.1 ProteinModelPortal:Q20447 SMR:Q20447
STRING:Q20447 PaxDb:Q20447 PRIDE:Q20447 EnsemblMetazoa:F46B6.6a
GeneID:179374 KEGG:cel:CELE_F46B6.6 UCSC:F46B6.6a CTD:179374
WormBase:F46B6.6a InParanoid:Q20447 NextBio:905138
ArrayExpress:Q20447 Uniprot:Q20447
Length = 702
Score = 562 (202.9 bits), Expect = 1.2e-67, Sum P(2) = 1.2e-67
Identities = 131/334 (39%), Positives = 199/334 (59%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS-ITFLDTPGH 126
R PIVTIMGHVDHGKT+LLD +R + + E GGITQHIGA++V G +TFLDTPGH
Sbjct: 155 RPPIVTIMGHVDHGKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGH 214
Query: 127 EAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLD 186
AF +MRARGAK DIVVLVVAADDGV QT ++I AK + V L+VA+NKIDK + +
Sbjct: 215 AAFASMRARGAKGADIVVLVVAADDGVKEQTAQSIKFAKDANVQLVVAVNKIDKPNADPM 274
Query: 187 RIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVTTPAKGV 246
R + L+ V+ E+ GG + +SA + L + + LQA++++LKA + V
Sbjct: 275 RAMRSLLEHDVVVEQLGGDVQCVEVSALQSRNLPSLQDALLLQADVMDLKATKKGKVEAV 334
Query: 247 IIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEI 306
IIES + G G V T+++ GTL+ ++VAG+S+ R+++M +ENGK + A PS PV +
Sbjct: 335 IIESSVVHGIGKVCTLVVSRGTLKKGCVLVAGSSWCRVKTMHDENGKIVQVATPSQPVRV 394
Query: 307 QGLTK-VPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDIN--KEK 363
G +P G+ ++L +A + R K ++++ K + + D ++K
Sbjct: 395 SGWKDDLPTPGD---LVL---EAETVD--RAQKAVNLRIDNMMREKADRDWEDTKDQRDK 446
Query: 364 VKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQ 397
+ + + + + +L+N+ K +I+
Sbjct: 447 ARETYLSNRQQLLDRGQRFGSTLRNIVHKKQRIE 480
Score = 168 (64.2 bits), Expect = 1.2e-67, Sum P(2) = 1.2e-67
Identities = 48/194 (24%), Positives = 87/194 (44%)
Query: 349 LHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINE 408
+HK + + D+ K +II+TDV G+ E + E L +++ K+Q++ VG E
Sbjct: 473 VHKKQRIEKDVADGSPK-FRLIIRTDVEGTLEAILEILSTYKSEQCKLQLVDFEVGPPTE 531
Query: 409 SDINLAIASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEK 468
DI LA + A I FNV A ++ A + +K E++ IP
Sbjct: 532 KDIELAKETDATIYTFNVETSAKLKQRADAAGIQIDSFNVIYRMIESLKGELSARIPKLT 591
Query: 469 KENLLGLAEIRQVILVN----KVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLK 524
+ +L+G + + +++ K IAG + G R + R +++ GE++++K
Sbjct: 592 ELHLVGEGHVLKEFVISDRGRKRQPIAGTLVNWGNFDRHCIYKFTRGNQVVYEGEVETMK 651
Query: 525 RFKDNVKEVKAGFE 538
+ V K E
Sbjct: 652 AGMEVVTNAKTNTE 665
Score = 145 (56.1 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 47/129 (36%), Positives = 62/129 (48%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-GT 985
I+ HVDHGKTTL+D + +N I A E GIT S+E G
Sbjct: 161 IMGHVDHGKTTLLDAM--------RNSQIAA-----GEFG---GITQHIGAFSVELTKGR 204
Query: 986 RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
R+ +DTPGHA F R D V+L++ A +G QT + A + +V VN
Sbjct: 205 RVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKEQTAQSIKFAKDANVQLVVAVN 264
Query: 1046 KIDRSNARP 1054
KID+ NA P
Sbjct: 265 KIDKPNADP 273
>GENEDB_PFALCIPARUM|PFE0830c [details] [associations]
symbol:PFE0830c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000795 InterPro:IPR003029
InterPro:IPR005225 Pfam:PF00009 PROSITE:PS50126 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL844504
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR022967 SMART:SM00316
KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR023115 Pfam:PF11987
SUPFAM:SSF52156 RefSeq:XP_001351723.1 HSSP:P04766
ProteinModelPortal:Q8I3U2 IntAct:Q8I3U2 MINT:MINT-1686038
EnsemblProtists:PFE0830c:mRNA GeneID:812981 KEGG:pfa:PFE0830c
EuPathDB:PlasmoDB:PF3D7_0516600 Uniprot:Q8I3U2
Length = 1610
Score = 518 (187.4 bits), Expect = 5.9e-61, Sum P(2) = 5.9e-61
Identities = 131/378 (34%), Positives = 213/378 (56%)
Query: 22 NQVLDQETAMILVEEMGHVAHASKLNDPESFLL---NEYNKN-ITAESLVRAPIVTIMGH 77
N+ LD++ +M +E S+ + ++ L + K+ T + R +VT +GH
Sbjct: 941 NESLDEKDSMEKSKEKKKKKGKSRKKNKDTNLTLKSDSIQKSKTTLDDKKRNVVVTFIGH 1000
Query: 78 VDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNV-VTNHGSITFLDTPGHEAFTAMRARG 136
++HGKTSL DYI KTN E G ITQ+I A+ V N+ + T +DTPGHEAF MR+RG
Sbjct: 1001 INHGKTSLFDYICKTNEQKKEYGLITQNIRAFKATVRNNFTFTLVDTPGHEAFMPMRSRG 1060
Query: 137 AKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLISEQ 196
K++D+ +LV++ D+G+ QT E I K + +I+AI K+D ++++DRI DL+
Sbjct: 1061 VKISDLSILVISGDEGIQEQTVECIKLIKEFNIKIIIAITKVDIPNVDVDRIINDLLYHD 1120
Query: 197 VIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA-PVTT--PAKGVIIESRLD 253
+ E GG + S I+KLL+ I L++E L L+ P A+GV+++S +D
Sbjct: 1121 ITTELNGGEIQVVECSIYKEESIDKLLDAIYLESEFLNLQTNPDKKHEQAQGVVLDSYID 1180
Query: 254 KGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEIQGLTK-- 311
K G V+ L+Q+G L +D G+SYG+++ + + KNI A PS P++I G K
Sbjct: 1181 KN-GIVSINLLQNGVLNINDHFYTGSSYGKVKILKDHLNKNIKSAYPSDPIKIIGYNKNS 1239
Query: 312 VPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKNLLIII 371
VP +G++ +V+ NE A+EI + K ++++ +T N + K+ +I
Sbjct: 1240 VPVAGDKFYVVENEALAKEIAEHNKNKMLTMEINNFTYDQT-------NMNRYKDFIISR 1292
Query: 372 KTDVYGSREVLTES-LKN 388
+ + GS +L E+ LKN
Sbjct: 1293 ENKIGGSSGILGENNLKN 1310
Score = 205 (77.2 bits), Expect = 5.9e-61, Sum P(2) = 5.9e-61
Identities = 60/193 (31%), Positives = 94/193 (48%)
Query: 359 INKEKVKNLL--IIIKTDVYGSREVLTESLKNLSTD----KVKIQVIHNAVGNINESDIN 412
I K ++K + IIK D GS EVL + L + K+K ++I+ +GN+ SDI
Sbjct: 1397 IGKNEIKTIYSNYIIKCDKQGSIEVLKNCMLKLQKEDSICKIKNKIIYADIGNVTSSDIK 1456
Query: 413 LAIASKAIIIGFNVRA--DASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIP--LEK 468
A + A II F V+ D K ++ E+ + + L K
Sbjct: 1457 YATSFNATIIAFGVKLSNDIKGSKNSKGSKNHNNYPIIYSNVLYELIENVEKEMEKKLSK 1516
Query: 469 KE--NLLGLAEIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRF 526
K L G A+I +V ++K+ K+AGC + +G I +S IRILRN +I+ G++ S+K
Sbjct: 1517 KPMGELKGTAQILKVFNISKLGKVAGCIVKKGTISINSNIRILRNDKVIYMGKIISIKIV 1576
Query: 527 KDNVKEVKAGFEC 539
K+ +V EC
Sbjct: 1577 KEEKTQVTEADEC 1589
Score = 49 (22.3 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 1089 ANENSKARQGNMIPLFEAILK--YVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSG 1146
+N+ K ++ M ++ K ++ +H +N+N +I+++ S+++GK I I S
Sbjct: 1353 SNDYDKIKETKMYTNNKSFQKDDFLKIHLNNTNE----NVINMDPSTHIGKNEIKTIYSN 1408
Query: 1147 RI 1148
I
Sbjct: 1409 YI 1410
Score = 38 (18.4 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 305 EIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFN 357
E + + + + G+ ++ I N K I + K K+ L+ +N N
Sbjct: 614 ENEDINNIQYKGDYIYSIDNNKNDNIIDSDINNHHINNKKKKKNLYDIQNNMN 666
>UNIPROTKB|Q8I3U2 [details] [associations]
symbol:PFE0830c "GTP-binding translation elongation factor
tu family protein, putative" species:36329 "Plasmodium falciparum
3D7" [GO:0020011 "apicoplast" evidence=RCA] InterPro:IPR000795
InterPro:IPR003029 InterPro:IPR005225 Pfam:PF00009 PROSITE:PS50126
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
GO:GO:0003746 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AL844504 InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR022967
SMART:SM00316 KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR023115
Pfam:PF11987 SUPFAM:SSF52156 RefSeq:XP_001351723.1 HSSP:P04766
ProteinModelPortal:Q8I3U2 IntAct:Q8I3U2 MINT:MINT-1686038
EnsemblProtists:PFE0830c:mRNA GeneID:812981 KEGG:pfa:PFE0830c
EuPathDB:PlasmoDB:PF3D7_0516600 Uniprot:Q8I3U2
Length = 1610
Score = 518 (187.4 bits), Expect = 5.9e-61, Sum P(2) = 5.9e-61
Identities = 131/378 (34%), Positives = 213/378 (56%)
Query: 22 NQVLDQETAMILVEEMGHVAHASKLNDPESFLL---NEYNKN-ITAESLVRAPIVTIMGH 77
N+ LD++ +M +E S+ + ++ L + K+ T + R +VT +GH
Sbjct: 941 NESLDEKDSMEKSKEKKKKKGKSRKKNKDTNLTLKSDSIQKSKTTLDDKKRNVVVTFIGH 1000
Query: 78 VDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNV-VTNHGSITFLDTPGHEAFTAMRARG 136
++HGKTSL DYI KTN E G ITQ+I A+ V N+ + T +DTPGHEAF MR+RG
Sbjct: 1001 INHGKTSLFDYICKTNEQKKEYGLITQNIRAFKATVRNNFTFTLVDTPGHEAFMPMRSRG 1060
Query: 137 AKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLISEQ 196
K++D+ +LV++ D+G+ QT E I K + +I+AI K+D ++++DRI DL+
Sbjct: 1061 VKISDLSILVISGDEGIQEQTVECIKLIKEFNIKIIIAITKVDIPNVDVDRIINDLLYHD 1120
Query: 197 VIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA-PVTT--PAKGVIIESRLD 253
+ E GG + S I+KLL+ I L++E L L+ P A+GV+++S +D
Sbjct: 1121 ITTELNGGEIQVVECSIYKEESIDKLLDAIYLESEFLNLQTNPDKKHEQAQGVVLDSYID 1180
Query: 254 KGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEIQGLTK-- 311
K G V+ L+Q+G L +D G+SYG+++ + + KNI A PS P++I G K
Sbjct: 1181 KN-GIVSINLLQNGVLNINDHFYTGSSYGKVKILKDHLNKNIKSAYPSDPIKIIGYNKNS 1239
Query: 312 VPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKNLLIII 371
VP +G++ +V+ NE A+EI + K ++++ +T N + K+ +I
Sbjct: 1240 VPVAGDKFYVVENEALAKEIAEHNKNKMLTMEINNFTYDQT-------NMNRYKDFIISR 1292
Query: 372 KTDVYGSREVLTES-LKN 388
+ + GS +L E+ LKN
Sbjct: 1293 ENKIGGSSGILGENNLKN 1310
Score = 205 (77.2 bits), Expect = 5.9e-61, Sum P(2) = 5.9e-61
Identities = 60/193 (31%), Positives = 94/193 (48%)
Query: 359 INKEKVKNLL--IIIKTDVYGSREVLTESLKNLSTD----KVKIQVIHNAVGNINESDIN 412
I K ++K + IIK D GS EVL + L + K+K ++I+ +GN+ SDI
Sbjct: 1397 IGKNEIKTIYSNYIIKCDKQGSIEVLKNCMLKLQKEDSICKIKNKIIYADIGNVTSSDIK 1456
Query: 413 LAIASKAIIIGFNVRA--DASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIP--LEK 468
A + A II F V+ D K ++ E+ + + L K
Sbjct: 1457 YATSFNATIIAFGVKLSNDIKGSKNSKGSKNHNNYPIIYSNVLYELIENVEKEMEKKLSK 1516
Query: 469 KE--NLLGLAEIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRF 526
K L G A+I +V ++K+ K+AGC + +G I +S IRILRN +I+ G++ S+K
Sbjct: 1517 KPMGELKGTAQILKVFNISKLGKVAGCIVKKGTISINSNIRILRNDKVIYMGKIISIKIV 1576
Query: 527 KDNVKEVKAGFEC 539
K+ +V EC
Sbjct: 1577 KEEKTQVTEADEC 1589
Score = 49 (22.3 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 15/62 (24%), Positives = 33/62 (53%)
Query: 1089 ANENSKARQGNMIPLFEAILK--YVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSG 1146
+N+ K ++ M ++ K ++ +H +N+N +I+++ S+++GK I I S
Sbjct: 1353 SNDYDKIKETKMYTNNKSFQKDDFLKIHLNNTNE----NVINMDPSTHIGKNEIKTIYSN 1408
Query: 1147 RI 1148
I
Sbjct: 1409 YI 1410
Score = 38 (18.4 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 11/53 (20%), Positives = 22/53 (41%)
Query: 305 EIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFN 357
E + + + + G+ ++ I N K I + K K+ L+ +N N
Sbjct: 614 ENEDINNIQYKGDYIYSIDNNKNDNIIDSDINNHHINNKKKKKNLYDIQNNMN 666
>DICTYBASE|DDB_G0275751 [details] [associations]
symbol:DDB_G0275751 "translation initiation factor
IF-2" species:44689 "Dictyostelium discoideum" [GO:0006413
"translational initiation" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000178 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 dictyBase:DDB_G0275751 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
EMBL:AAFI02000013 GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
eggNOG:COG0532 KO:K02519 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 TIGRFAMs:TIGR00487 RefSeq:XP_643537.1
ProteinModelPortal:Q553N4 STRING:Q553N4 EnsemblProtists:DDB0202481
GeneID:8620119 KEGG:ddi:DDB_G0275751 InParanoid:Q553N4 OMA:GATEHES
Uniprot:Q553N4
Length = 994
Score = 601 (216.6 bits), Expect = 5.2e-55, P = 5.2e-55
Identities = 137/312 (43%), Positives = 190/312 (60%)
Query: 68 RAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS--------IT 119
R P+VT++GH+DHGKTSLLD++R T+VV +E G ITQHIGA+ V+ N S IT
Sbjct: 456 RPPVVTVVGHIDHGKTSLLDFLRSTSVVDNEPGRITQHIGAFEVLINDRSDAKKAKRAIT 515
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
F+DTPGH AF+ MR RG +TDIV+LVVAADDGV QT EAI K + V +IV INK+D
Sbjct: 516 FMDTPGHSAFSTMRERGVGITDIVLLVVAADDGVQEQTIEAIKAIKKNDVQVIVVINKMD 575
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV 239
K D N + +K +L+ + E GG P + ISAKTG+GI L E I +++ELKAPV
Sbjct: 576 KPDANPELVKMELLENGIACEGVGGDVPCVEISAKTGMGIQTLEETILFIGDMMELKAPV 635
Query: 240 T-TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEA 298
GV+IE+ + +G +T+L+Q G L+ + V G S+G+I+ M N G + E
Sbjct: 636 KDVQVSGVVIETSFKRNRGTYSTILVQKGILKINQFFVCGESHGKIKEMKNHLGTQLKEG 695
Query: 299 GPSIPVEIQGLTK-VPFSGEELFVILNEKKAREIGLFRQGK--FRDVKLSKQKL-HKTEN 354
P VEI G + P GEE FV +EK+ I R+ + D + +K+ + E+
Sbjct: 696 KPGQAVEIFGFKEGAPPLGEEFFVFDSEKEVLAIIDERKERKISEDTRREIKKMAYGKED 755
Query: 355 MFNDINKEKVKN 366
D++ E+ N
Sbjct: 756 EEEDLDNEEEMN 767
Score = 218 (81.8 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 62/244 (25%), Positives = 114/244 (46%)
Query: 315 SGEELFVILNEKKAREIGLFRQGKFRDVKLSKQK----LHKTENM--FNDINKEKVKNLL 368
S +E+ I++E+K R+I + + + + K+ L E M D+ + K +
Sbjct: 722 SEKEVLAIIDERKERKISEDTRREIKKMAYGKEDEEEDLDNEEEMNGTEDLGDIEKKTVR 781
Query: 369 IIIKTDVYGSREVLTESLKNLSTD-KVKIQVIHNAVGNINESDINLAIASKAIIIGFNVR 427
+K DV G+ E L+ L L D ++ I + G + E+DI A+ K I+ F +
Sbjct: 782 FFVKGDVTGTAEALSAMLFTLPQDPEISIDIQRVGYGEVTENDIKDALFLKTPIVYFGSK 841
Query: 428 ADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAEIRQVILVNK- 486
+ + ++ + +++ N+ G A+I QV +N
Sbjct: 842 LNPKILDSCKKQGVKLIQSDVIYHVVNHVQEYLESILQPVTIFNVTGRAQISQVFDINDG 901
Query: 487 VSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFECERLSRIE 546
K+AGC + +G+I++ +K+ ++RN + + G ++ +K FKD VKE+ G EC R
Sbjct: 902 KEKVAGCKVEDGIIKKGAKVHVMRNGDSVHEGRVEVIKSFKDIVKEIGKGHECGITLREY 961
Query: 547 NQIQ 550
N IQ
Sbjct: 962 NGIQ 965
Score = 152 (58.6 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 50/162 (30%), Positives = 75/162 (46%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ H+DHGKT+L+D L S + I I + +R +K
Sbjct: 462 VVGHIDHGKTSLLDFLRSTSVVDNEPGRITQHIGAFEVLINDRSDAKKAKRA-------- 513
Query: 987 INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNK 1046
I +DTPGH+ F ER + + D VLL++ A +G QT + K + IVV+NK
Sbjct: 514 ITFMDTPGHSAFSTMRERGVGITDIVLLVVAADDGVQEQTIEAIKAIKKNDVQVIVVINK 573
Query: 1047 IDRSNARPEWVVDATFDLFDKLCATEEQL-DFPVIYTSALHG 1087
+D+ +A PE V +L + A E D P + SA G
Sbjct: 574 MDKPDANPELV---KMELLENGIACEGVGGDVPCVEISAKTG 612
Score = 37 (18.1 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 1256 EIKNNIGLRVTQNKHDDSIYEVSG 1279
E+KN++G ++ + K ++ E+ G
Sbjct: 683 EMKNHLGTQLKEGKPGQAV-EIFG 705
Score = 37 (18.1 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 734 GITTETGDIEGKIIDFNK-NIPNSIE 758
G TE EG I FNK + P I+
Sbjct: 38 GKPTEKPINEGNTISFNKIDFPKLIQ 63
Score = 37 (18.1 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 591 NKDISIKNILDNLSKAKNYIRFKLSKKLHIHTLPI-LNFFYD 631
N +I+ N +N N+ +F+L ++ PI LN ++
Sbjct: 73 NNNINNNNNNNNNDNNNNHQKFQLQQQQQQQNRPITLNLKFN 114
>UNIPROTKB|P60340 [details] [associations]
symbol:truB "tRNA pseudouridine 55 synthase" species:83333
"Escherichia coli K-12" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001522 "pseudouridine
synthesis" evidence=IEA;IDA] [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
evidence=IEA;IMP] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR015240 InterPro:IPR020103
Pfam:PF01509 Pfam:PF09157 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:U18997
GO:GO:0003723 GO:GO:0008033 InterPro:IPR015947 SUPFAM:SSF88697
eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
EMBL:X13775 KO:K03177 PANTHER:PTHR13767 EMBL:X13270
TIGRFAMs:TIGR00431 OMA:LGCGAYV HOGENOM:HOG000231223
ProtClustDB:PRK05033 EMBL:S79856 PIR:S01916 RefSeq:NP_417635.1
RefSeq:YP_491353.1 PDB:1K8W PDB:1R3F PDB:1ZL3 PDBsum:1K8W
PDBsum:1R3F PDBsum:1ZL3 ProteinModelPortal:P60340 SMR:P60340
IntAct:P60340 PRIDE:P60340 EnsemblBacteria:EBESCT00000000040
EnsemblBacteria:EBESCT00000000041 EnsemblBacteria:EBESCT00000017815
GeneID:12933440 GeneID:947687 KEGG:ecj:Y75_p3088 KEGG:eco:b3166
PATRIC:32121750 EchoBASE:EB1164 EcoGene:EG11177
BioCyc:EcoCyc:EG11177-MONOMER BioCyc:ECOL316407:JW3135-MONOMER
BioCyc:MetaCyc:EG11177-MONOMER EvolutionaryTrace:P60340
Genevestigator:P60340 Uniprot:P60340
Length = 314
Score = 507 (183.5 bits), Expect = 3.2e-47, P = 3.2e-47
Identities = 99/208 (47%), Positives = 134/208 (64%)
Query: 662 IHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLS 721
I+GVLLLDKP G+SSN+AL+K+K + NA + G+TG LDP ATG+LP+C GEATKFS YL
Sbjct: 11 INGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLL 70
Query: 722 EADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSAL 781
++DK Y I LG T+T D +G+I++ + + S E + L F G I QIP MYSAL
Sbjct: 71 DSDKRYRVIARLGQRTDTSDADGQIVE-ERPVTFSAEQLAAALDTFRGDIEQIPSMYSAL 129
Query: 782 KYKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVLSEDIGK 841
KY+G LY+YAR G L L IHCSKGTYIR + +D+G+
Sbjct: 130 KYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYIRTIIDDLGE 189
Query: 842 MLGCGAHLKYLRRIGIDKLTLDKCLNID 869
LGCGAH+ YLRR+ + K +++ + ++
Sbjct: 190 KLGCGAHVIYLRRLAVSKYPVERMVTLE 217
>UNIPROTKB|Q9KU78 [details] [associations]
symbol:truB "tRNA pseudouridine synthase B" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009982 "pseudouridine synthase
activity" evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR015240 InterPro:IPR020103
Pfam:PF01509 Pfam:PF09157 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003723 GO:GO:0006400 InterPro:IPR015947 SUPFAM:SSF88697
eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431 OMA:LGCGAYV
ProtClustDB:PRK05033 PIR:C82298 RefSeq:NP_230294.1
ProteinModelPortal:Q9KU78 SMR:Q9KU78 DNASU:2615435 GeneID:2615435
KEGG:vch:VC0645 PATRIC:20080403 Uniprot:Q9KU78
Length = 312
Score = 494 (179.0 bits), Expect = 7.8e-46, P = 7.8e-46
Identities = 90/216 (41%), Positives = 136/216 (62%)
Query: 656 KKNKNIIHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATK 715
++ +IHGV+LLDKP G+SSN+AL+K+K L A+K G+TG LDP ATG+LP+C GEATK
Sbjct: 4 RRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATK 63
Query: 716 FSNYLSEADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIP 775
FS +L ++DK Y I LG T+T D +G+++ + + + + + F G+ Q+P
Sbjct: 64 FSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQ-TRPVHVDYDTLLACIAKFRGETDQVP 122
Query: 776 PMYSALKYKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVL 835
M+SALKY+G PLY+YAR G + + +HCSKGTYIR +
Sbjct: 123 SMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTI 182
Query: 836 SEDIGKMLGCGAHLKYLRRIGIDKLTLDKCLNIDTI 871
+D+G+MLGCGAH+ LRR+G+ ++ + ++ +
Sbjct: 183 VDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQL 218
>TIGR_CMR|VC_0645 [details] [associations]
symbol:VC_0645 "tRNA pseudouridine 55 synthase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0009982 "pseudouridine synthase activity"
evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501 InterPro:IPR014780
InterPro:IPR015240 InterPro:IPR020103 Pfam:PF01509 Pfam:PF09157
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006400
InterPro:IPR015947 SUPFAM:SSF88697 eggNOG:COG0130 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 KO:K03177 PANTHER:PTHR13767
TIGRFAMs:TIGR00431 OMA:LGCGAYV ProtClustDB:PRK05033 PIR:C82298
RefSeq:NP_230294.1 ProteinModelPortal:Q9KU78 SMR:Q9KU78
DNASU:2615435 GeneID:2615435 KEGG:vch:VC0645 PATRIC:20080403
Uniprot:Q9KU78
Length = 312
Score = 494 (179.0 bits), Expect = 7.8e-46, P = 7.8e-46
Identities = 90/216 (41%), Positives = 136/216 (62%)
Query: 656 KKNKNIIHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATK 715
++ +IHGV+LLDKP G+SSN+AL+K+K L A+K G+TG LDP ATG+LP+C GEATK
Sbjct: 4 RRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATK 63
Query: 716 FSNYLSEADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIP 775
FS +L ++DK Y I LG T+T D +G+++ + + + + + F G+ Q+P
Sbjct: 64 FSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQ-TRPVHVDYDTLLACIAKFRGETDQVP 122
Query: 776 PMYSALKYKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVL 835
M+SALKY+G PLY+YAR G + + +HCSKGTYIR +
Sbjct: 123 SMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTI 182
Query: 836 SEDIGKMLGCGAHLKYLRRIGIDKLTLDKCLNIDTI 871
+D+G+MLGCGAH+ LRR+G+ ++ + ++ +
Sbjct: 183 VDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQL 218
>TIGR_CMR|CPS_2205 [details] [associations]
symbol:CPS_2205 "tRNA pseudouridine synthase B"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009982 "pseudouridine synthase
activity" evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR015240 InterPro:IPR020103
Pfam:PF01509 Pfam:PF09157 GO:GO:0003723 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0008033 InterPro:IPR015947
SUPFAM:SSF88697 eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431
OMA:LGCGAYV RefSeq:YP_268930.1 STRING:Q482T7 GeneID:3520371
KEGG:cps:CPS_2205 PATRIC:21467525 HOGENOM:HOG000231223
ProtClustDB:PRK05033 BioCyc:CPSY167879:GI48-2275-MONOMER
Uniprot:Q482T7
Length = 318
Score = 481 (174.4 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 94/207 (45%), Positives = 129/207 (62%)
Query: 662 IHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLS 721
++GVLLLDKP+GLSSN+AL+ +K + A+K G+TG LDP ATG+LP+C GE TKFS YL
Sbjct: 10 VNGVLLLDKPHGLSSNHALQTVKRIYFAQKAGHTGALDPLATGMLPICLGEGTKFSQYLL 69
Query: 722 EADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSAL 781
+ DK Y+ LGI T T D G+++ K + S E + K L +F G Q+P MYSAL
Sbjct: 70 DTDKTYQVTAKLGIRTTTSDAGGEVVS-EKTVDVSSEQLAKALDSFRGTTKQVPSMYSAL 128
Query: 782 KYKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVLSEDIGK 841
K++G PLYKYAR G + L IH SKGTYIR + +D+G+
Sbjct: 129 KHQGQPLYKYAREGIEVPREARDITVFNLELLRFEHDEVELNIHVSKGTYIRTIVDDLGE 188
Query: 842 MLGCGAHLKYLRRIGIDKLTLDKCLNI 868
+LGCGAH+ +LRR + ++K + +
Sbjct: 189 LLGCGAHVAHLRRSAVGNYPVEKMITL 215
Score = 41 (19.5 bits), Expect = 1.3e-45, Sum P(2) = 1.3e-45
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 1491 IEFINDDELVEITPKNIRLRKRF 1513
+ FINDD LV PK I + +++
Sbjct: 298 VGFINDDGLV--APKRIVVLEQY 318
>TIGR_CMR|CBU_1430 [details] [associations]
symbol:CBU_1430 "tRNA pseudouridine synthase B"
species:227377 "Coxiella burnetii RSA 493" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009982 "pseudouridine synthase
activity" evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR015240 InterPro:IPR020103
Pfam:PF01509 Pfam:PF09157 GO:GO:0003723 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008033 InterPro:IPR015947
SUPFAM:SSF88697 eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431
OMA:LGCGAYV HOGENOM:HOG000231223 ProtClustDB:PRK05033
RefSeq:YP_338283.1 ProteinModelPortal:Q4AAX7 SMR:Q4AAX7
GeneID:1209336 KEGG:cbu:CBU_1430 PATRIC:17931611
BioCyc:CBUR227377:GJ7S-1417-MONOMER Uniprot:Q4AAX7
Length = 309
Score = 485 (175.8 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 104/227 (45%), Positives = 137/227 (60%)
Query: 654 HIKKNKNIIHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEA 713
H K K + GVLLLDKP G++SN AL+++K L +AKK G+TG+LDP ATGLLP+C GEA
Sbjct: 6 HPKLFKRPVDGVLLLDKPGGMTSNEALQRVKRLFHAKKAGHTGSLDPLATGLLPICLGEA 65
Query: 714 TKFSNYLSEADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIE-IIEKILINFHGKIS 772
TKFS +L EADK Y LG+ T +GD E I+ + IP + +EK L F G I
Sbjct: 66 TKFSQFLLEADKSYSVKGRLGVRTASGDSESPILT-ERPIPKLTKRALEKTLFAFRGVID 124
Query: 773 QIPPMYSALKYKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYI 832
Q P MYSALK+KG PLYK AR G + L +HCSKGTYI
Sbjct: 125 QTPSMYSALKHKGQPLYKLARQGIEVERKTRQVTIYELTLLDWDNESIELYVHCSKGTYI 184
Query: 833 RVLSEDIGKMLGCGAHLKYLRRIGIDKLTLDKCLNIDTIIKYSEYER 879
R L +D+G+ LGCGAH+ LRR+ + D+ + + + + EY++
Sbjct: 185 RTLLDDVGEALGCGAHVVALRRLRVAHYHEDQMIKLAHLER--EYDK 229
>TIGR_CMR|GSU_1591 [details] [associations]
symbol:GSU_1591 "tRNA pseudouridine synthase B"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009982 "pseudouridine synthase
activity" evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR020103 Pfam:PF01509 GO:GO:0003723
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008033
eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431 HOGENOM:HOG000231225
OMA:LGCGAYV RefSeq:NP_952642.1 ProteinModelPortal:P60344
GeneID:2687358 KEGG:gsu:GSU1591 PATRIC:22026027
ProtClustDB:CLSK2522239 BioCyc:GSUL243231:GH27-1625-MONOMER
Uniprot:P60344
Length = 304
Score = 439 (159.6 bits), Expect = 5.7e-40, P = 5.7e-40
Identities = 86/216 (39%), Positives = 131/216 (60%)
Query: 664 GVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSEA 723
G +++DKP GL+S++ + +++ L KK G+TGTLDPFATG+LP+ GE TK YL E+
Sbjct: 3 GFIVIDKPIGLTSHDVVARVRQTLRQKKAGHTGTLDPFATGVLPVAVGEGTKAIPYLDES 62
Query: 724 DKYYEAIIHLGITTETGDIEGKII---DFNKNIPNSIEIIEKILINFHGKISQIPPMYSA 780
K Y A + LG T+T D G+++ D+ P S+ ++ +F GK+SQ+PPM+SA
Sbjct: 63 TKVYRATLILGAATDTQDHTGQVVHAGDWRHLEPQSVR---DVVSSFTGKLSQLPPMFSA 119
Query: 781 LKYKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVLSEDIG 840
LK G+PLYK AR+G P +T + CS+GTY+R L+ D+G
Sbjct: 120 LKRDGVPLYKLARTGREVERERREIEVFSLVVDSIDLPLVTFTLSCSRGTYVRTLAHDMG 179
Query: 841 KMLGCGAHLKYLRRIGIDKLTLDKCLNIDTIIKYSE 876
+ LGCGAHL LRR+ LD+ ++++ + + +E
Sbjct: 180 ERLGCGAHLTELRRLSSGPFNLDRAISLERLKELAE 215
>TIGR_CMR|DET_0981 [details] [associations]
symbol:DET_0981 "tRNA pseudouridine synthase B"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009982 "pseudouridine synthase
activity" evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR020103 Pfam:PF01509 GO:GO:0003723
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0008033
eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431 HOGENOM:HOG000231225
OMA:LGCGAYV RefSeq:YP_181704.1 ProteinModelPortal:Q3Z7U5
STRING:Q3Z7U5 GeneID:3229762 KEGG:det:DET0981 PATRIC:21609011
ProtClustDB:PRK00130 BioCyc:DETH243164:GJNF-982-MONOMER
Uniprot:Q3Z7U5
Length = 300
Score = 375 (137.1 bits), Expect = 3.8e-33, P = 3.8e-33
Identities = 79/194 (40%), Positives = 117/194 (60%)
Query: 662 IHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLS 721
++G+L ++KP GL+S + K++++ + KKVG+ G LDP ATG++P+ G AT+ YLS
Sbjct: 1 MNGILNINKPPGLTSFGVVSKVRHIYSQKKVGHGGMLDPSATGVIPVFLGSATRLIEYLS 60
Query: 722 EADKYYEAIIHLGITTETGDIEGKIIDFNKNIPN-SIEIIEKILINFHGKISQIPPMYSA 780
K Y A I LG T++ D EG+I K+ + + +++ L +F G+I+QIPPMYSA
Sbjct: 61 SVRKTYLAEIELGTETDSYDSEGEITS-RKSCEHITADMVRNALPDFLGEITQIPPMYSA 119
Query: 781 LKYKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVLSEDIG 840
+K++G+ LY AR G P L LRI C GTYIR ++ D+G
Sbjct: 120 VKHRGVRLYNLARQGIEVERNPRKAAIYGIEFLGFASPVLRLRIECGHGTYIRSIAFDLG 179
Query: 841 KMLGCGAHLKYLRR 854
+ LGCGA+LK L R
Sbjct: 180 RKLGCGAYLKTLVR 193
>TIGR_CMR|BA_0107 [details] [associations]
symbol:BA_0107 "translation elongation factor G"
species:198094 "Bacillus anthracis str. Ames" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 KO:K02355 HAMAP:MF_00054_B
TIGRFAMs:TIGR00484 OMA:QEPGKGY ProtClustDB:PRK00007
HOGENOM:HOG000231587 RefSeq:NP_842675.1 RefSeq:YP_016712.1
RefSeq:YP_026393.1 ProteinModelPortal:Q81VT3 SMR:Q81VT3
IntAct:Q81VT3 DNASU:1086334 EnsemblBacteria:EBBACT00000011698
EnsemblBacteria:EBBACT00000017929 EnsemblBacteria:EBBACT00000023425
GeneID:1086334 GeneID:2818836 GeneID:2851108 KEGG:ban:BA_0107
KEGG:bar:GBAA_0107 KEGG:bat:BAS0107
BioCyc:BANT260799:GJAJ-118-MONOMER
BioCyc:BANT261594:GJ7F-120-MONOMER Uniprot:Q81VT3
Length = 692
Score = 260 (96.6 bits), Expect = 5.5e-30, Sum P(4) = 5.5e-30
Identities = 63/155 (40%), Positives = 87/155 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRK--NQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L +G K + A MD E E+ERGITI S + ++ G
Sbjct: 15 IMAHIDAGKTTATERILYYTGRIHKIGETHEGASQMDWMEQEQERGITITSAATTAQWKG 74
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R+NIIDTPGH DF EVER L ++D + ++DA G PQT V R+A G IV V
Sbjct: 75 HRVNIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETVWRQATTYGVPRIVFV 134
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
NK+D+ A + V + D+L A + P+
Sbjct: 135 NKMDKIGADFLYSVGT---IHDRLQANAHPIQLPI 166
Score = 133 (51.9 bits), Expect = 5.5e-30, Sum P(4) = 5.5e-30
Identities = 45/196 (22%), Positives = 84/196 (42%)
Query: 1115 KDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRV 1174
K + P + Y+GK+ R+ SG + S + N K + ++ +I
Sbjct: 301 KSSDEEPFAALAFKIMTDPYVGKLTFFRVYSGVLNS--GSYVKNSTKGK--RERVGRILQ 356
Query: 1175 FKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNS 1234
R ++ +GDI G+++ G T+CD L + EP +++ +
Sbjct: 357 MHANSREEISTVYAGDIAAAVGLKDTTTGDTLCDEKSLVILESMEFPEPVISV--AIEPK 414
Query: 1235 PLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRR 1294
A ++ K T + D + + T + +I ++G GELHL I+++ MRR
Sbjct: 415 SKADQD-KMGTALSKLSEEDPTFRAH-----TDQETGQTI--IAGMGELHLDIIVDRMRR 466
Query: 1295 E-GYELSVSRPRVIFK 1309
E E +V P+V ++
Sbjct: 467 EFKVEANVGAPQVAYR 482
Score = 129 (50.5 bits), Expect = 9.5e-16, Sum P(4) = 9.5e-16
Identities = 32/81 (39%), Positives = 39/81 (48%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +DTPGH FT R +V D V V+ A GV PQT
Sbjct: 60 GITITSAATTAQWKGHRVNIIDTPGHVDFTVEVERSLRVLDGAVAVLDAQSGVEPQTETV 119
Query: 161 IAHAKISGVPLIVAINKIDKL 181
A GVP IV +NK+DK+
Sbjct: 120 WRQATTYGVPRIVFVNKMDKI 140
Score = 77 (32.2 bits), Expect = 5.5e-30, Sum P(4) = 5.5e-30
Identities = 24/97 (24%), Positives = 41/97 (42%)
Query: 1312 NGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQ 1371
N + EP + V I E G IM + R G ++ +E +V + +P + G+
Sbjct: 596 NPVILEPMMKVEVVIPEEYMGDIMGDVTSRRGRVEGMEARGNAQV-VRAMVPLSEMFGYA 654
Query: 1372 NEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNG 1408
+ T+G G S VF+ Y ++ K+ G
Sbjct: 655 TSLRSNTQGRGTFSMVFDHYEEVPKSVSEEIIKKNKG 691
Score = 47 (21.6 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 21/99 (21%), Positives = 42/99 (42%)
Query: 1317 EPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFIT 1376
E + + + E++ II+ ++ + K +E N ++ YR R + +F
Sbjct: 443 ETGQTIIAGMGELHLDIIVDRMRR---EFK-VEANVGAP-QVAYRETFRAAAKVEGKFAR 497
Query: 1377 LTRGTGLISHVFEEYAPFYNKSKYDL-GKRRNGVLISQY 1414
+ G G HV+ E+ P ++ K GV+ +Y
Sbjct: 498 QSGGRGQFGHVWIEFEPNEEGKGFEFENKIVGGVVPREY 536
Score = 45 (20.9 bits), Expect = 5.5e-30, Sum P(4) = 5.5e-30
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 65 SLVRAPIVTIMGHVDHGKTSLLDYI 89
SL + IM H+D GKT+ + I
Sbjct: 6 SLENTRNIGIMAHIDAGKTTATERI 30
>UNIPROTKB|Q97QJ3 [details] [associations]
symbol:truB "tRNA pseudouridine synthase B" species:170187
"Streptococcus pneumoniae TIGR4" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_01080 InterPro:IPR002501 InterPro:IPR014780
InterPro:IPR015225 InterPro:IPR020103 Pfam:PF01509 Pfam:PF09142
GO:GO:0003723 EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0008033
eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431 HOGENOM:HOG000231225
OMA:LGCGAYV PIR:F95140 RefSeq:NP_345679.1 ProteinModelPortal:Q97QJ3
EnsemblBacteria:EBSTRT00000026891 GeneID:931726 KEGG:spn:SP_1212
PATRIC:19706819 ProtClustDB:PRK02484 Uniprot:Q97QJ3
Length = 292
Score = 345 (126.5 bits), Expect = 6.0e-30, P = 6.0e-30
Identities = 76/221 (34%), Positives = 122/221 (55%)
Query: 662 IHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLS 721
++G++ L K G++S++A+ K++ +L KK+G+ GTLDP G+LP+ G+AT+ ++
Sbjct: 1 MNGIINLKKEAGMTSHDAVFKLRKILGTKKIGHGGTLDPDVVGVLPIAVGKATRMVEFMQ 60
Query: 722 EADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIE-IIEKILINFHGKISQIPPMYSA 780
+ K YE I LG +T+T D G+++ + E ++++ + + G I+QIPPMYSA
Sbjct: 61 DEGKIYEGEITLGYSTKTEDASGEVVAETPVLSLLDEKLVDEAIASLTGPITQIPPMYSA 120
Query: 781 LKYKGIPLYKYARSGXXXXX-----XXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVL 835
+K G LY+YAR+G T R+ CSKGTYIR L
Sbjct: 121 VKVNGRKLYEYARAGQEVERPERQVTIYQFERTSPISYDGQLARFTFRVKCSKGTYIRTL 180
Query: 836 SEDIGKMLGCGAHLKYLRRIGIDKLTLDKCLNIDTIIKYSE 876
S D+G+ LG AH+ +L R L L+ L ++ I + E
Sbjct: 181 SVDLGEKLGYAAHMSHLTRTSAAGLQLEDALALEEIAEKVE 221
>TIGR_CMR|CHY_2313 [details] [associations]
symbol:CHY_2313 "translation elongation factor G"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003924
GO:GO:0006184 GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 KO:K02355 HAMAP:MF_00054_B
TIGRFAMs:TIGR00484 OMA:QEPGKGY ProtClustDB:PRK00007
HOGENOM:HOG000231587 RefSeq:YP_361122.1 ProteinModelPortal:Q3A9R2
SMR:Q3A9R2 STRING:Q3A9R2 GeneID:3726362 KEGG:chy:CHY_2313
PATRIC:21277695 BioCyc:CHYD246194:GJCN-2312-MONOMER Uniprot:Q3A9R2
Length = 692
Score = 234 (87.4 bits), Expect = 6.4e-30, Sum P(3) = 6.4e-30
Identities = 57/128 (44%), Positives = 74/128 (57%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L +G K ++ A MD E+ERGITI S + +
Sbjct: 15 IMAHIDAGKTTTTERILFYTGKVHKMGEVHDGAATMDWMVQEQERGITITSAATTCFWKN 74
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINIIDTPGH DF EVER L ++D + + AV G PQ+ V R+A K G I V
Sbjct: 75 HRINIIDTPGHVDFTVEVERSLRVLDGAVAIFCAVGGVEPQSETVWRQADKYGVPRIAYV 134
Query: 1045 NKIDRSNA 1052
NK+DR A
Sbjct: 135 NKMDRMGA 142
Score = 161 (61.7 bits), Expect = 6.4e-30, Sum P(3) = 6.4e-30
Identities = 53/201 (26%), Positives = 90/201 (44%)
Query: 1115 KDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRV 1174
K + + P + Y+GK+ R+ SG +K+ ++N K K +I ++
Sbjct: 301 KASDSEPFAALAFKIMADPYVGKLTFFRVYSGVLKA--GSYVLNSTKGK--KERIGRLLR 356
Query: 1175 FKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNS 1234
R ++E SGDI G+++ G TICD P L + EP IN +
Sbjct: 357 MHANHREEIDEVCSGDIAAAVGLKDTHTGDTICDEKHPIVLESMEFPEPV--INVAIEPK 414
Query: 1235 PLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRR 1294
+E I +++ D K T + +I ++G GELHL I+++ + R
Sbjct: 415 TKQDQEKMSIALQRLAEE-DPTFK-----MWTDQETGQTI--IAGMGELHLEIIVDRLMR 466
Query: 1295 E-GYELSVSRPRVIFK-TLNG 1313
E E +V +P+V +K T+ G
Sbjct: 467 EFKVEANVGKPQVAYKETVRG 487
Score = 128 (50.1 bits), Expect = 9.5e-19, Sum P(4) = 9.5e-19
Identities = 47/155 (30%), Positives = 70/155 (45%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
MG V H + +D++ V + GIT A + I +DTPGH FT
Sbjct: 40 MGEV-HDGAATMDWM-----VQEQERGITITSAATTCFWKNHRINIIDTPGHVDFTVEVE 93
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLIS 194
R +V D V + A GV PQ+ A GVP I +NK+D++ N + + I
Sbjct: 94 RSLRVLDGAVAIFCAVGGVEPQSETVWRQADKYGVPRIAYVNKMDRMGANFFEVVRQ-IK 152
Query: 195 EQVIPEEYGGASPF-ISI---SAKTGVGINKLLEN 225
E++ GA+P I + + T G+ L+EN
Sbjct: 153 ERL------GANPVPIQLPIGNEDTFQGVIDLIEN 181
Score = 77 (32.2 bits), Expect = 6.4e-30, Sum P(3) = 6.4e-30
Identities = 23/92 (25%), Positives = 42/92 (45%)
Query: 1300 SVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLE 1359
S++ + + K N L EP + V + E G ++ LN R G ++ +E +V
Sbjct: 585 SMAAKQAVLKA-NPVLLEPIMKVEVVVPEEYMGEVIGDLNSRRGRIEGMEARNNMQVVRG 643
Query: 1360 YRIPSRGLIGFQNEFITLTRGTGLISHVFEEY 1391
Y +P + G+ + + T+G G + F Y
Sbjct: 644 Y-VPLAEMFGYATDLRSKTQGRGTYTMHFSHY 674
Score = 63 (27.2 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 30/135 (22%), Positives = 63/135 (46%)
Query: 1285 LTILIENMRREGYE-LSVSRPRVIFKTLNGELY---EPYENLFVDIEEINQGIIMQKLNY 1340
+ + IE ++ E +S++ R+ + +++ E + + + E++ II+ +L
Sbjct: 407 INVAIEPKTKQDQEKMSIALQRLAEEDPTFKMWTDQETGQTIIAGMGELHLEIIVDRL-M 465
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R + K +E N + ++ Y+ RG + ++I T G G HV+ E P Y
Sbjct: 466 R--EFK-VEANVG-KPQVAYKETVRGTAKAEGKYIRQTGGRGQYGHVWIEIEPLEPGKGY 521
Query: 1401 D-LGKRRNGVLISQY 1414
+ + K GV+ +Y
Sbjct: 522 EFVNKIVGGVIPKEY 536
Score = 46 (21.3 bits), Expect = 9.5e-19, Sum P(4) = 9.5e-19
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 66 LVRAPIVTIMGHVDHGKTSLLDYI 89
L R + IM H+D GKT+ + I
Sbjct: 7 LERTRNIGIMAHIDAGKTTTTERI 30
>TIGR_CMR|NSE_0687 [details] [associations]
symbol:NSE_0687 "translation elongation factor G"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CP000237
GenomeReviews:CP000237_GR Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355 HAMAP:MF_00054_B
TIGRFAMs:TIGR00484 OMA:QEPGKGY RefSeq:YP_506564.1
ProteinModelPortal:Q2GD82 STRING:Q2GD82 PRIDE:Q2GD82 GeneID:3932067
KEGG:nse:NSE_0687 PATRIC:22681393 ProtClustDB:CLSK2527789
BioCyc:NSEN222891:GHFU-700-MONOMER Uniprot:Q2GD82
Length = 692
Score = 243 (90.6 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 64/155 (41%), Positives = 85/155 (54%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L +G R ++ A MD E EKERGITI S + + G
Sbjct: 16 IMAHIDAGKTTTTERILLYTGVNRTVGEVHEGAATMDWMEQEKERGITITSAATTCWWKG 75
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
+INIIDTPGH DF EVER L ++D + + D V G PQ+ V R+A K + V
Sbjct: 76 AKINIIDTPGHVDFTIEVERSLRVLDGAVAVFDGVAGVEPQSETVWRQADKHNVPRLCFV 135
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
NK+DR A ++ A L KL A L P+
Sbjct: 136 NKMDRMGA--DFYRCAEM-LVSKLSANPVILQLPI 167
Score = 146 (56.5 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 52/185 (28%), Positives = 86/185 (46%)
Query: 1134 YLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVL 1193
Y+G + RI SG + S DVVI N D NK +I ++ + R V +G+IV
Sbjct: 321 YVGSLTFVRIYSGTLNS-GDVVI-NSHGD--NKERIGRMLLMHANSREDVKSETAGNIVA 376
Query: 1194 ITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRL 1253
+ G++ G T+C K L ++ +P + I V A +E + RL
Sbjct: 377 LAGLKNTSTGDTLCASGKVLTLERISAPDPVIEI--AVEPKSTAEQEKMALAVA----RL 430
Query: 1254 DHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKTLN 1312
E + L+V N+ + G GELHL I+++ ++RE ++V P+V ++
Sbjct: 431 CAE---DPSLKVASNEETGQTL-LRGMGELHLEIILDRLKREFNVNVNVGDPQVAYRETI 486
Query: 1313 GELYE 1317
+ YE
Sbjct: 487 TQSYE 491
Score = 111 (44.1 bits), Expect = 1.5e-15, Sum P(3) = 1.5e-15
Identities = 38/138 (27%), Positives = 59/138 (42%)
Query: 59 KNITAES-LVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
K T E L+ + +G V G ++ D++ + + GIT A
Sbjct: 24 KTTTTERILLYTGVNRTVGEVHEGAATM-DWMEQ-----EKERGITITSAATTCWWKGAK 77
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +DTPGH FT R +V D V V GV PQ+ A VP + +NK
Sbjct: 78 INIIDTPGHVDFTIEVERSLRVLDGAVAVFDGVAGVEPQSETVWRQADKHNVPRLCFVNK 137
Query: 178 IDKLDINLDRIKQDLISE 195
+D++ + R + L+S+
Sbjct: 138 MDRMGADFYRCAEMLVSK 155
Score = 80 (33.2 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 23/84 (27%), Positives = 39/84 (46%)
Query: 1309 KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
K L ++ EP + + E G ++ LN R G + +E RV + +P +
Sbjct: 593 KKLGLKIMEPLMRVEIVTPEEYTGTVIGDLNSRRGKIAEMEAKGNARV-ISGVVPLSRMF 651
Query: 1369 GFQNEFITLTRGTGLISHVFEEYA 1392
G+ N+ + T+G S F+EYA
Sbjct: 652 GYVNDLRSSTQGRASYSMEFKEYA 675
Score = 57 (25.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 19/62 (30%), Positives = 28/62 (45%)
Query: 229 QAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVA--GASYGRIRS 286
+ E + +K P G+ + D G + V I SGTL D+V+ G + RI
Sbjct: 295 KGEEINIKPDPKAPFVGLAFKVMNDPYVGSLTFVRIYSGTLNSGDVVINSHGDNKERIGR 354
Query: 287 ML 288
ML
Sbjct: 355 ML 356
Score = 45 (20.9 bits), Expect = 7.5e-09, Sum P(3) = 7.5e-09
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA 108
+ IM H+D GKT+ + I V G + H GA
Sbjct: 14 IGIMAHIDAGKTTTTERILLYTGVNRTVGEV--HEGA 48
>UNIPROTKB|P0A6M8 [details] [associations]
symbol:fusA "elongation factor G" species:83333
"Escherichia coli K-12" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003746 "translation elongation factor activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0003924 GO:GO:0006184 EMBL:U18997 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355 HAMAP:MF_00054_B
TIGRFAMs:TIGR00484 OMA:QEPGKGY ProtClustDB:PRK00007 EMBL:X00415
EMBL:X64592 EMBL:J01689 EMBL:X65735 PIR:G65127 RefSeq:NP_417799.1
RefSeq:YP_492092.1 PDB:2RDO PDB:3J0E PDBsum:2RDO PDBsum:3J0E
ProteinModelPortal:P0A6M8 SMR:P0A6M8 DIP:DIP-31836N IntAct:P0A6M8
PhosSite:P0809388 SWISS-2DPAGE:P0A6M8 PaxDb:P0A6M8 PRIDE:P0A6M8
EnsemblBacteria:EBESCT00000001282 EnsemblBacteria:EBESCT00000001283
EnsemblBacteria:EBESCT00000017746 GeneID:12930395 GeneID:947847
KEGG:ecj:Y75_p3836 KEGG:eco:b3340 PATRIC:32122112 EchoBASE:EB0355
EcoGene:EG10360 BioCyc:EcoCyc:EG10360-MONOMER
BioCyc:ECOL316407:JW3302-MONOMER EvolutionaryTrace:P0A6M8
Genevestigator:P0A6M8 Uniprot:P0A6M8
Length = 704
Score = 218 (81.8 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 57/135 (42%), Positives = 75/135 (55%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITI-------FSKN 977
I AH+D GKTT + +L +G K ++ A MD E E+ERGITI F
Sbjct: 15 ISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSG 74
Query: 978 CSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLG 1037
+ +Y RINIIDTPGH DF EVER + ++D +++ AV G PQ+ V R+A K
Sbjct: 75 MAKQYEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYK 134
Query: 1038 FKPIVVVNKIDRSNA 1052
I VNK+DR A
Sbjct: 135 VPRIAFVNKMDRMGA 149
Score = 168 (64.2 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 57/215 (26%), Positives = 99/215 (46%)
Query: 1101 IPLFEAIL---KYVPVHKDNSNN-PLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVI 1156
+P IL K P + S++ P + ++G + R+ SG + S D V+
Sbjct: 292 VPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNS-GDTVL 350
Query: 1157 MNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLP 1216
+ + +I Q+ K R + E +GDI G++++ G T+CDP P L
Sbjct: 351 NSVKAARERFGRIVQMHANK---REEIKEVRAGDIAAAIGLKDVTTGDTLCDPDAPIILE 407
Query: 1217 MLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRV-TQNKHDDSIY 1275
+ EP ++I V A +E + RL K + RV T + + +I
Sbjct: 408 RMEFPEPVISI--AVEPKTKADQEKMGLAL----GRL---AKEDPSFRVWTDEESNQTI- 457
Query: 1276 EVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK 1309
++G GELHL I+++ M+RE E +V +P+V ++
Sbjct: 458 -IAGMGELHLDIIVDRMKREFNVEANVGKPQVAYR 491
Score = 114 (45.2 bits), Expect = 4.8e-18, Sum P(4) = 4.8e-18
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +DTPGH FT R +V D V+V A GV PQ+ A VP I +NK
Sbjct: 84 INIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNK 143
Query: 178 IDKLDINLDRI 188
+D++ N ++
Sbjct: 144 MDRMGANFLKV 154
Score = 84 (34.6 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 24/84 (28%), Positives = 40/84 (47%)
Query: 1308 FKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGL 1367
FK L EP + V+ E N G ++ L+ R G LK E +E V++ +P +
Sbjct: 605 FKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGMLKGQE-SEVTGVKIHAEVPLSEM 663
Query: 1368 IGFQNEFITLTRGTGLISHVFEEY 1391
G+ + +LT+G + F +Y
Sbjct: 664 FGYATQLRSLTKGRASYTMEFLKY 687
Score = 41 (19.5 bits), Expect = 3.9e-25, Sum P(3) = 3.9e-25
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 1443 GMIIGIHSRDNDLLVNPIKEKQLTNIR-------SSGSDEAIQLISPIKITLEYAIEFIN 1495
G +IG SR +L +E ++T ++ S A QL S K Y +EF+
Sbjct: 629 GDVIGDLSRRRGMLKG--QESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTMEFLK 686
Query: 1496 DDELVEITPKNI 1507
DE P N+
Sbjct: 687 YDE----APSNV 694
Score = 39 (18.8 bits), Expect = 4.8e-18, Sum P(4) = 4.8e-18
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA 108
+ I H+D GKT+ + I V + G + H GA
Sbjct: 13 IGISAHIDAGKTTTTERILFYTGVNHKIGEV--HDGA 47
>TIGR_CMR|ECH_0728 [details] [associations]
symbol:ECH_0728 "tRNA pseudouridine synthase B"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006400
"tRNA modification" evidence=ISS] [GO:0009982 "pseudouridine
synthase activity" evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR020103 Pfam:PF01509 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0003723 GO:GO:0008033
eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431 HOGENOM:HOG000231225
ProtClustDB:CLSK2516851 RefSeq:YP_507531.1
ProteinModelPortal:Q2GGA2 STRING:Q2GGA2 GeneID:3927663
KEGG:ech:ECH_0728 PATRIC:20576900 OMA:PPKYSAK
BioCyc:ECHA205920:GJNR-731-MONOMER Uniprot:Q2GGA2
Length = 296
Score = 340 (124.7 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 84/278 (30%), Positives = 141/278 (50%)
Query: 662 IHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLS 721
++G + LDKP G+SS +A+ +K +LN KKVG+ GTLDP A+G+LP+ GEATK Y
Sbjct: 1 MYGWINLDKPCGISSASAVNLVKKILNVKKVGHAGTLDPLASGVLPIAIGEATKVMPYAV 60
Query: 722 EADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSAL 781
+ K Y + G T DIEGKI+ + +P+S E I+K + NF G + Q+PP +SA+
Sbjct: 61 DVVKSYLFTVQWGEQRTTDDIEGKIVAKSDIVPSS-EDIKKAIPNFIGLLRQVPPNFSAV 119
Query: 782 KYKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLTLRIH--CSKGTYIRVLSEDI 839
G+ +K AR+G + C KG Y+R ++ D+
Sbjct: 120 HVNGVRAFKLARNGQDVSLTSRDVNVLKLKLLSADQENNKADFYLLCKKGVYVRSIARDL 179
Query: 840 GKMLGCGAHLKYLRRIGIDKLTLDKCLNIDTI-IKYSEYERXXXXXXXXXXXXXFGII-- 896
G LGC +++ L+R+ + + ++ + + Y+ + +
Sbjct: 180 GIELGCLGYVRKLQRVRVGCFRKKNAITLEMLKMLYNNSRKCSYLLPLWYVLQDMKHLND 239
Query: 897 YLSDLLSKRFLHGQNLFLSDENIYILIKSAIIAHVDHG 934
SD+ K+ +GQN+ L+ N+Y+ +++ I +V G
Sbjct: 240 VFSDIQIKKIKNGQNIELN--NLYV-VRNCGICYVSTG 274
>TIGR_CMR|APH_0769 [details] [associations]
symbol:APH_0769 "tRNA pseudouridine synthase B"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009982 "pseudouridine synthase
activity" evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR020103 Pfam:PF01509 GO:GO:0003723
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008033
eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431 RefSeq:YP_505348.1
ProteinModelPortal:Q2GJV3 STRING:Q2GJV3 GeneID:3930851
KEGG:aph:APH_0769 PATRIC:20950230 HOGENOM:HOG000231225 OMA:LGCGAYV
ProtClustDB:CLSK2516851 BioCyc:APHA212042:GHPM-785-MONOMER
Uniprot:Q2GJV3
Length = 300
Score = 335 (123.0 bits), Expect = 7.0e-29, P = 7.0e-29
Identities = 79/201 (39%), Positives = 107/201 (53%)
Query: 663 HGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSE 722
HG L +DKPYG+SS + + K+K +L K VG+ GTLDP ATG+LP+ FGEATK +NY ++
Sbjct: 3 HGWLNIDKPYGVSSGSVVGKLKKMLQCK-VGHAGTLDPLATGVLPIAFGEATKTTNYATD 61
Query: 723 ADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALK 782
K YE I G +T D EGKII + P I++ L + G I QIP +SA+K
Sbjct: 62 TLKSYEVTIQWGEQRDTDDKEGKIIRTSTLRPTE-HSIKEALQQYVGVIQQIPSTFSAIK 120
Query: 783 YKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLT--LRIHCSKGTYIRVLSEDIG 840
G+ Y +R G T LRI C KG Y+R ++ D+G
Sbjct: 121 VGGMRAYSLSRMGKEVALAPRSVCITEIELLSVDSGSNTADLRITCGKGVYVRAVARDLG 180
Query: 841 KMLGCGAHLKYLRRIGIDKLT 861
LGC ++ LRR + T
Sbjct: 181 ITLGCYGYVARLRRTMVGPFT 201
>TIGR_CMR|SPO_3837 [details] [associations]
symbol:SPO_3837 "tRNA pseudouridine synthase B"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009982 "pseudouridine synthase
activity" evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR020103 Pfam:PF01509 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003723 GO:GO:0008033
eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431 HOGENOM:HOG000231225
OMA:LGCGAYV RefSeq:YP_169025.1 ProteinModelPortal:Q5LLT4
GeneID:3196374 KEGG:sil:SPO3837 PATRIC:23381177
ProtClustDB:PRK05389 Uniprot:Q5LLT4
Length = 303
Score = 335 (123.0 bits), Expect = 7.0e-29, P = 7.0e-29
Identities = 76/201 (37%), Positives = 108/201 (53%)
Query: 656 KKNKNIIHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATK 715
K+ I G L++DKP G++S + K+++ L A K G+ GTLDP ATG+L + GEATK
Sbjct: 4 KRKGRDISGWLVVDKPAGMTSTAVVNKVRWALGANKAGHAGTLDPEATGVLAIALGEATK 63
Query: 716 FSNYLSEADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIP 775
Y+++A K Y + LG T T D EG++I + P E I+ L F G I Q+P
Sbjct: 64 TVPYITDALKAYVFTVRLGQATNTDDAEGEVIASSDLRPTD-EQIKDALAPFLGDIMQVP 122
Query: 776 PMYSALKYKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXP-YLTLRIHCSKGTYIRV 834
P +SA+K G YK AR G P ++ L + C KG Y+R
Sbjct: 123 PKFSAVKIDGQRAYKLARDGEDVELAARPLWVEELLMLDRPDPDHVLLEMTCGKGGYVRS 182
Query: 835 LSEDIGKMLGCGAHLKYLRRI 855
++ D+G LGC H++ LRRI
Sbjct: 183 IARDLGAALGCYGHVRELRRI 203
>TIGR_CMR|ECH_0961 [details] [associations]
symbol:ECH_0961 "translation elongation factor G"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0003924 GO:GO:0006184
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
HAMAP:MF_00054_B TIGRFAMs:TIGR00484 ProtClustDB:PRK00007
OMA:EEYTGGI RefSeq:YP_507748.1 ProteinModelPortal:Q2GFN5
STRING:Q2GFN5 PRIDE:Q2GFN5 GeneID:3927818 KEGG:ech:ECH_0961
PATRIC:20577304 BioCyc:ECHA205920:GJNR-964-MONOMER Uniprot:Q2GFN5
Length = 690
Score = 250 (93.1 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 65/155 (41%), Positives = 87/155 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L +G + ++ A MD E EKERGITI S + +NG
Sbjct: 15 IMAHIDAGKTTTTERILFYTGKQNRIGEVHEGAASMDWMEQEKERGITITSAATTCFWNG 74
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINIIDTPGH DF EVER L ++D + + D V G PQ+ V R+A K I +
Sbjct: 75 HRINIIDTPGHVDFTIEVERSLRVLDGAVAVFDGVAGVEPQSETVWRQADKYNVPRICFM 134
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
NK+DR A VD + ++L AT L P+
Sbjct: 135 NKMDRMGADFYRCVDM---VVERLGATPLVLQLPI 166
Score = 160 (61.4 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 58/216 (26%), Positives = 102/216 (47%)
Query: 1099 NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYS----SYLGKIGIGRILSGRIKSLQDV 1154
N IP+ EA L + N + + + ++L + ++G + RI SGR+ S
Sbjct: 283 NDIPMMEA-LDVKTSNTINIKSSIDGKFVALAFKVMTDKFVGSLTFIRIYSGRLSS--KT 339
Query: 1155 VIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNG 1214
++N K + I +I + +R + EA +GDIV + G+++ G T+C +P
Sbjct: 340 TVLNAV--KNSTESIGRILLMHANNREDITEAKAGDIVALAGLKKTVTGDTLCTLDQPII 397
Query: 1215 LPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSI 1274
L + EP + I V A +E I +RL E ++G+ V +I
Sbjct: 398 LERMEFPEPVMEI--AVEPKSTADQEKMGIAL----SRLVAE-DPSLGMCVNPES-GQTI 449
Query: 1275 YEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK 1309
+ G GELHL ++++ MRRE E ++ P+V ++
Sbjct: 450 --LKGMGELHLEVIVDRMRREFNVEANIGAPQVAYR 483
Score = 116 (45.9 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 48/158 (30%), Positives = 70/158 (44%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G V G S+ D++ + + GIT A N I +DTPGH FT
Sbjct: 40 IGEVHEGAASM-DWMEQ-----EKERGITITSAATTCFWNGHRINIIDTPGHVDFTIEVE 93
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLIS 194
R +V D V V GV PQ+ A VP I +NK+D++ + R D++
Sbjct: 94 RSLRVLDGAVAVFDGVAGVEPQSETVWRQADKYNVPRICFMNKMDRMGADFYRCV-DMVV 152
Query: 195 EQVIPEEYGGASPFI---SISA-KTGVGINKLLENISL 228
E++ GA+P + I K VG+ LLE S+
Sbjct: 153 ERL------GATPLVLQLPIGIEKDFVGVVDLLEMRSI 184
Score = 44 (20.5 bits), Expect = 7.0e-14, Sum P(3) = 7.0e-14
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ IM H+D GKT+ + I
Sbjct: 13 IGIMAHIDAGKTTTTERI 30
>TIGR_CMR|CHY_1763 [details] [associations]
symbol:CHY_1763 "tRNA pseudouridine synthase B"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006400 "tRNA modification" evidence=ISS] [GO:0009982
"pseudouridine synthase activity" evidence=ISS] HAMAP:MF_01080
InterPro:IPR002501 InterPro:IPR014780 InterPro:IPR020103
Pfam:PF01509 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003723
GO:GO:0008033 eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522
SUPFAM:SSF55120 KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431
HOGENOM:HOG000231225 RefSeq:YP_360583.1 ProteinModelPortal:Q3ABA1
STRING:Q3ABA1 GeneID:3728168 KEGG:chy:CHY_1763 PATRIC:21276639
OMA:QVPSKVS BioCyc:CHYD246194:GJCN-1762-MONOMER Uniprot:Q3ABA1
Length = 288
Score = 327 (120.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 80/205 (39%), Positives = 111/205 (54%)
Query: 664 GVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSE- 722
G + L KP G++S++ + ++ L KVG+ GTLDP A G+LP+ G+AT+ YL
Sbjct: 3 GFINLLKPPGMTSHDVVAYVRKKLKTGKVGHLGTLDPAAAGVLPVAVGQATRLIEYLENV 62
Query: 723 ADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALK 782
A K Y A I GITT T D+EG+I++ + IEK+L +FHG+I Q PP+ SA+K
Sbjct: 63 AMKEYLAEIVFGITTATWDMEGEILEQKDASFLTAGDIEKVLGHFHGEIEQTPPLASAVK 122
Query: 783 YKGIPLYKYARSGXXXX----XXXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVLSED 838
G PLY+Y R G P + L I CS+GTYIR ++ +
Sbjct: 123 VSGKPLYRYQRQGEKVEPPKRKVFIDSIELLEFLADKPQPAVRLYIRCSRGTYIRSIANE 182
Query: 839 IGKMLGCGAHLKYLRRIGIDKLTLD 863
IG +L GA LK+L R LD
Sbjct: 183 IGNLLKTGATLKFLLRTRSGPFLLD 207
>TIGR_CMR|CPS_4765 [details] [associations]
symbol:CPS_4765 "translation elongation factor G"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:CP000083
GenomeReviews:CP000083_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
HAMAP:MF_00054_B TIGRFAMs:TIGR00484 OMA:GEICAFV RefSeq:YP_271409.1
ProteinModelPortal:Q47UW3 SMR:Q47UW3 STRING:Q47UW3 PRIDE:Q47UW3
GeneID:3521870 KEGG:cps:CPS_4765 PATRIC:21472347
BioCyc:CPSY167879:GI48-4771-MONOMER Uniprot:Q47UW3
Length = 699
Score = 228 (85.3 bits), Expect = 8.6e-28, Sum P(3) = 8.6e-28
Identities = 61/142 (42%), Positives = 79/142 (55%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITI-------FSKN 977
I AHVD GKTT + +L +G K ++ A MD E E+ERGITI F K
Sbjct: 15 ICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGAATMDWMEQEQERGITITSAATTCFWKG 74
Query: 978 CSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLG 1037
++ RINIIDTPGH DF EVER L ++D +L++ G PQT V R+ K
Sbjct: 75 MEGQFEDHRINIIDTPGHVDFTIEVERSLRVLDGAVLVLCGSSGVQPQTETVWRQMEKYA 134
Query: 1038 FKPIVVVNKIDRSNARPEWVVD 1059
IV VNK+DR+ A +VV+
Sbjct: 135 VPRIVFVNKMDRTGADFLYVVE 156
Score = 158 (60.7 bits), Expect = 8.6e-28, Sum P(3) = 8.6e-28
Identities = 55/196 (28%), Positives = 90/196 (45%)
Query: 1121 PLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDR 1180
P + ++G + R+ SG +++ V P K K + +I DR
Sbjct: 316 PFSALAFKIATDPFVGTLTFFRVYSGVVQTGDSVY---NPV-KGKKERFGRIVQMHANDR 371
Query: 1181 VLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGRE 1240
+ E +GDI G++++ G T+CD L + EP +++ V LA +E
Sbjct: 372 QEIKEVRAGDIAAAIGLKDVTTGDTLCDAKHIITLERMEFPEPVISV--AVEPRTLAAQE 429
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRV-TQNKHDDSIYEVSGRGELHLTILIENMRRE-GYE 1298
I +L E + RV T ++ +I +SG GELHL IL+E M+RE G E
Sbjct: 430 KMGIAL----GKLAAE---DPSFRVATDDETGQTI--ISGMGELHLDILVERMKREFGVE 480
Query: 1299 LSVSRPRVIFK-TLNG 1313
+V P+V ++ T+ G
Sbjct: 481 CNVGNPQVSYRETIRG 496
Score = 118 (46.6 bits), Expect = 4.3e-16, Sum P(3) = 4.3e-16
Identities = 32/108 (29%), Positives = 49/108 (45%)
Query: 75 MGHVDHGKTSL--LDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAM 132
+G V G ++ ++ ++ + + A G +H I +DTPGH FT
Sbjct: 40 IGEVHDGAATMDWMEQEQERGITITSAATTCFWKGMEGQFEDH-RINIIDTPGHVDFTIE 98
Query: 133 RARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
R +V D VLV+ GV PQT + VP IV +NK+D+
Sbjct: 99 VERSLRVLDGAVLVLCGSSGVQPQTETVWRQMEKYAVPRIVFVNKMDR 146
Score = 66 (28.3 bits), Expect = 8.6e-28, Sum P(3) = 8.6e-28
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 1312 NGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQ 1371
N + EP + V E N G ++ LN R G + ++ + +P + G+
Sbjct: 605 NPVILEPMMKVEVTTPEANMGDVVGDLNRRRGMIDGMDEGPAGSKIVNALVPLAEMFGYA 664
Query: 1372 NEFITLTRGTGLISHVFEEY 1391
+ + T+G S F++Y
Sbjct: 665 TDLRSATQGRASYSMEFQQY 684
Score = 55 (24.4 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 17/77 (22%), Positives = 36/77 (46%)
Query: 1317 EPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFIT 1376
E + + + E++ I+++++ G +E N ++ YR RG + + +FI
Sbjct: 452 ETGQTIISGMGELHLDILVERMKREFG----VECNVGNP-QVSYRETIRGTVEVEGKFIR 506
Query: 1377 LTRGTGLISHVFEEYAP 1393
+ G G HV+ + P
Sbjct: 507 QSGGKGQFGHVWLKMEP 523
Score = 44 (20.5 bits), Expect = 3.9e-08, Sum P(4) = 3.9e-08
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 351 KTENMFNDINKEKVKNLLIIIKTDVYGSREV-LTESLKN-LSTDKVKIQVIHNAVGNINE 408
+TE ++ + K V ++ + K D G+ + + E LK L + V I + A + E
Sbjct: 122 QTETVWRQMEKYAVPRIVFVNKMDRTGADFLYVVEQLKTRLGANAVPIHLAIGAEDDF-E 180
Query: 409 SDINLAIASKAI 420
++L I KAI
Sbjct: 181 GVVDL-IKMKAI 191
Score = 38 (18.4 bits), Expect = 3.9e-08, Sum P(4) = 3.9e-08
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I HVD GKT+ + +
Sbjct: 13 IGICAHVDAGKTTTTERV 30
>TIGR_CMR|APH_1033 [details] [associations]
symbol:APH_1033 "translation elongation factor G"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:CP000235
GenomeReviews:CP000235_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
HAMAP:MF_00054_B TIGRFAMs:TIGR00484 ProtClustDB:PRK00007
RefSeq:YP_505591.1 ProteinModelPortal:Q2GJ60 SMR:Q2GJ60
STRING:Q2GJ60 PRIDE:Q2GJ60 GeneID:3930163 KEGG:aph:APH_1033
PATRIC:20950816 OMA:EEYTGGI BioCyc:APHA212042:GHPM-1039-MONOMER
Uniprot:Q2GJ60
Length = 690
Score = 251 (93.4 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 65/155 (41%), Positives = 86/155 (55%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L +G + ++ A MD E EKERGITI S + +NG
Sbjct: 15 IMAHIDAGKTTTTERILFYTGKQNRIGEVHEGAASMDWMEQEKERGITITSAATTCFWNG 74
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINIIDTPGH DF EVER L ++D + + D V G PQ+ V R+A + I V
Sbjct: 75 CRINIIDTPGHVDFTVEVERSLRVLDGAVAVFDGVAGVEPQSETVWRQADRYDVPRICFV 134
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
NK+DR A VD + D+L A L P+
Sbjct: 135 NKMDRVGADFYTCVDM---IVDRLGAVPLVLQLPI 166
Score = 150 (57.9 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 44/177 (24%), Positives = 84/177 (47%)
Query: 1134 YLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVL 1193
++G + R+ SG++ V++N K + + +I + +R ++E +GDI
Sbjct: 322 FVGSLTFVRVYSGKLTGKS--VVLNS--SKGHTESVGRILLMHANNREDISEVKAGDIAA 377
Query: 1194 ITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRL 1253
+ G+++ G T+CD + P + + +D P + + A +E ++ L
Sbjct: 378 LAGLKKTTTGDTLCDQNFP--VILEKMDFPESVMELAIEPVSTADQE-------KMGMAL 428
Query: 1254 DHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK 1309
+ + L+V N + G GELHL I+++ MRRE G E SV P+V ++
Sbjct: 429 SRLVAEDPSLKVFVNNESGQTI-LKGMGELHLEIIVDRMRREFGVEASVGAPQVAYR 484
Score = 106 (42.4 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 46/158 (29%), Positives = 68/158 (43%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G V G S+ D++ + + GIT A N I +DTPGH FT
Sbjct: 40 IGEVHEGAASM-DWMEQ-----EKERGITITSAATTCFWNGCRINIIDTPGHVDFTVEVE 93
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLIS 194
R +V D V V GV PQ+ A VP I +NK+D++ + D+I
Sbjct: 94 RSLRVLDGAVAVFDGVAGVEPQSETVWRQADRYDVPRICFVNKMDRVGADFYTCV-DMIV 152
Query: 195 EQVIPEEYGGASPFI---SISAKTG-VGINKLLENISL 228
+++ GA P + I G VG+ L+E S+
Sbjct: 153 DRL------GAVPLVLQLPIGVDKGFVGVVDLVEMRSI 184
Score = 44 (20.5 bits), Expect = 8.3e-12, Sum P(3) = 8.3e-12
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ IM H+D GKT+ + I
Sbjct: 13 IGIMAHIDAGKTTTTERI 30
>UNIPROTKB|F1NX94 [details] [associations]
symbol:GUF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR000795 InterPro:IPR005225
InterPro:IPR006297 Pfam:PF00009 PRINTS:PR00315 PROSITE:PS00301
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924
GO:GO:0006184 InterPro:IPR009000 SUPFAM:SSF50447
PANTHER:PTHR23115:SF40 GeneTree:ENSGT00550000074940
EMBL:AADN02031260 IPI:IPI01017198 Ensembl:ENSGALT00000022990
ArrayExpress:F1NX94 Uniprot:F1NX94
Length = 303
Score = 284 (105.0 bits), Expect = 5.0e-27, Sum P(2) = 5.0e-27
Identities = 67/145 (46%), Positives = 87/145 (60%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
+IIAHVDHGK+TL D LL +GT K N +++D ++E+ERGIT+ +++ S+ YN
Sbjct: 63 SIIAHVDHGKSTLADRLLEITGTIAKTDR-NKQVLDKLQVERERGITVKAQSASLFYNYK 121
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G +N+IDTPGH DF EV R LS VLL++DA EG QT A + I
Sbjct: 122 GVNYLLNLIDTPGHVDFNYEVSRSLSACQGVLLVVDANEGIQAQTVANFYLAFEAQLAII 181
Query: 1042 VVVNKIDRSNARPEWVVDATFDLFD 1066
V+NKID NA PE V LFD
Sbjct: 182 PVINKIDLKNADPERVEKQIEKLFD 206
Score = 166 (63.5 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 66/241 (27%), Positives = 113/241 (46%)
Query: 56 EYNKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNH 115
++ K+ A+ L+ I + D K +LD ++ V E G IT + ++ N+
Sbjct: 69 DHGKSTLADRLLE--ITGTIAKTDRNK-QVLDKLQ----VERERG-ITVKAQSASLFYNY 120
Query: 116 GSITFL----DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPL 171
+ +L DTPGH F +R V+LVV A++G+ QT A + + +
Sbjct: 121 KGVNYLLNLIDTPGHVDFNYEVSRSLSACQGVLLVVDANEGIQAQTVANFYLAFEAQLAI 180
Query: 172 IVAINKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAE 231
I INKID + + +R+++ + IP + I ISAK G I+K+LE + +
Sbjct: 181 IPVINKIDLKNADPERVEKQIEKLFDIP-----VNECIRISAKQGTNIDKVLEKVI--EK 233
Query: 232 ILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNEN 291
I + T P K ++ +S D +G VA V + G ++ +V+ + R +NE
Sbjct: 234 IPPPQCNTTDPLKALVFDSTFDHYRGVVANVAVFGGEIQKGHRIVSAHTNKRYE--VNEV 291
Query: 292 G 292
G
Sbjct: 292 G 292
Score = 63 (27.2 bits), Expect = 5.0e-27, Sum P(2) = 5.0e-27
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+QG N+ + E +++ +P + N+ +PL+ + + Y G + + G I+
Sbjct: 217 AKQGTNIDKVLEKVIEKIPPPQCNTTDPLKALVFDSTFDHYRGVVANVAVFGGEIQKGHR 276
Query: 1154 VV 1155
+V
Sbjct: 277 IV 278
>TIGR_CMR|CHY_0410 [details] [associations]
symbol:CHY_0410 "GTP-binding protein LepA" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0005525 "GTP
binding" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003924 GO:GO:0006184
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:YP_359271.1 ProteinModelPortal:Q3AF13
SMR:Q3AF13 STRING:Q3AF13 GeneID:3727549 KEGG:chy:CHY_0410
PATRIC:21273981 BioCyc:CHYD246194:GJCN-411-MONOMER Uniprot:Q3AF13
Length = 603
Score = 254 (94.5 bits), Expect = 8.4e-27, Sum P(3) = 8.4e-27
Identities = 60/149 (40%), Positives = 89/149 (59%)
Query: 922 LIKS-AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSI 980
LI++ IIAH+DHGK+TL D L+ +G + + + +++D E+E+ERGITI ++ +
Sbjct: 7 LIRNFCIIAHIDHGKSTLADRLIEFTGALSERE-LKEQVLDQMELERERGITIKAQAVKL 65
Query: 981 EY-----NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALK 1035
Y N +N+IDTPGH DF EV R L+ + LL++DA +G QT A++
Sbjct: 66 TYKAKDGNTYYLNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGIEAQTLANVYLAME 125
Query: 1036 LGFKPIVVVNKIDRSNARPEWVVDATFDL 1064
+ I VVNKID NA PE V+ D+
Sbjct: 126 HDLELIPVVNKIDLPNAEPERVLKEIEDV 154
Score = 154 (59.3 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 47/153 (30%), Positives = 75/153 (49%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH FT +R + +LVV A G+ QT + A + LI +NK
Sbjct: 77 LNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGIEAQTLANVYLAMEHDLELIPVVNK 136
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + +R+ +++ E VI + S I SAKTG GI ++LE ++ I +
Sbjct: 137 IDLPNAEPERVLKEI--EDVIGLD---TSEAILASAKTGQGIEEVLE--AIVKRIPPPRG 189
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLR 270
P K +I +S D KG +A + + G ++
Sbjct: 190 DEEKPLKALIFDSHYDPYKGVIAYIRLVDGFIK 222
Score = 119 (46.9 bits), Expect = 8.4e-27, Sum P(3) = 8.4e-27
Identities = 55/236 (23%), Positives = 107/236 (45%)
Query: 1092 NSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
++K QG + + EAI+K +P + + PL+ I Y Y G I R++ G IK
Sbjct: 166 SAKTGQG-IEEVLEAIVKRIPPPRGDEEKPLKALIFDSHYDPYKGVIAYIRLVDGFIKPG 224
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLIT-GIEEI--C-IGSTIC 1207
+ +M+ +DK + ++ ++ +FK V +G++ I GI+ + C +G TI
Sbjct: 225 MKIKMMS--NDK--EFEVTEVGIFKPY-LTPVEGLWAGEVGFIAAGIKNVRDCRVGDTIT 279
Query: 1208 DPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQ 1267
P P+ + + MV ++ +++ L+ ++K N +
Sbjct: 280 SAENPAKEPLPGYKQ----VKPMVFCGLYPVESNQY---EDLRDALE-KLKLNDASLTFE 331
Query: 1268 NKHDDSI---YEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKTL--NGELYE 1317
+ ++ + G LH+ I+ E + RE G L + P V+++ + NGE+ E
Sbjct: 332 PETSVALGFGFRCGFLGLLHMEIIQERLEREYGLNLITTAPNVVYRVVQTNGEVLE 387
Score = 64 (27.6 bits), Expect = 8.4e-27, Sum P(3) = 8.4e-27
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 1317 EPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI-GFQNEFI 1375
EPY + + + G IM R G N+E + RV L Y +P +I F ++
Sbjct: 405 EPYVKATIMVPKEFVGNIMDLCIERRGVFINMEYLSENRVMLTYDLPLAEIIYDFFDQLK 464
Query: 1376 TLTRGTGLISHVFEEYAP 1393
+ ++G + + F Y P
Sbjct: 465 SRSKGYASLDYEFIGYRP 482
Score = 40 (19.1 bits), Expect = 7.7e-08, Sum P(3) = 7.7e-08
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 490 IAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAG 536
IA +++G I+ KI+++ N E+ K + V+ + AG
Sbjct: 211 IAYIRLVDGFIKPGMKIKMMSNDKEFEVTEVGIFKPYLTPVEGLWAG 257
>TAIR|locus:2199562 [details] [associations]
symbol:AT1G21160 "AT1G21160" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] [GO:0016926 "protein
desumoylation" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic
process" evidence=RCA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684 GO:GO:0003924
GO:GO:0006184 GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR022967 SMART:SM00316 eggNOG:COG0532
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156 KO:K03243
EMBL:AB493471 IPI:IPI00527064 RefSeq:NP_173540.2 UniGene:At.43837
ProteinModelPortal:C0SUW8 PaxDb:C0SUW8 PRIDE:C0SUW8
EnsemblPlants:AT1G21160.1 GeneID:838712 KEGG:ath:AT1G21160
TAIR:At1g21160 OMA:MGETISI PhylomeDB:C0SUW8 Genevestigator:C0SUW8
Uniprot:C0SUW8
Length = 1092
Score = 265 (98.3 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 70/168 (41%), Positives = 93/168 (55%)
Query: 30 AMILVEEMGHVAHASKLNDPESFLLNEYNKNITAESLVRAPIVTIMGHVDHGKTSLLDYI 89
AM V++ SK + E +LNE K + E +R+PI IMGHVD GKT LLD I
Sbjct: 462 AMPKVDDTTRPKDTSKKD--EGLVLNELAKEV--EENLRSPICCIMGHVDSGKTKLLDCI 517
Query: 90 RKTNVVFSEAGGITQHIGAY----------------NVVTNHGSITFLDTPGHEAFTAMR 133
R TNV EAGGITQ IGA N I +DTPGHE+FT +R
Sbjct: 518 RGTNVQEGEAGGITQQIGATFFPAENIRERTKELQANAKLKVPGILVIDTPGHESFTNLR 577
Query: 134 ARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKL 181
+RG+ + D+ +LVV G+ PQT E++ + V I+A+NK+D+L
Sbjct: 578 SRGSNLCDLAILVVDIMRGLEPQTIESLNLLRRRNVKFIIALNKVDRL 625
Score = 130 (50.8 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 84/351 (23%), Positives = 150/351 (42%)
Query: 201 EYGGASPFISISAKTGVGINKLLENISLQAE--ILELKAPVTTPAKGVIIESRLDKGKGP 258
E G + SA +G GI LL + A+ ++E K + ++E ++ +G G
Sbjct: 677 EMGETISILPASAISGEGIPDLLLFLVQWAQKTMVE-KLTYVDKVQCTVLEVKVIEGHGI 735
Query: 259 VATVLIQSGTLRCSDIVVAGASYG----RIRSMLNENGKNILEA-GPSIPV-EIQGLTKV 312
V++ +G LR D +V S G IRS+L N + G +P E++ +
Sbjct: 736 TVDVVLVNGVLREGDQIVVCGSQGPIVTTIRSLLTPYPMNEMRVTGTYMPHREVKAAQGI 795
Query: 313 PFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQK-LHKTENMFNDINKEKVKNLLIII 371
+ + L E L G D++ +K+ + E++ N I+K + +
Sbjct: 796 KIAAQGL-----EHAIAGTALHVIGPNEDMEEAKKNAMEDIESVMNRIDKSGEG---VYV 847
Query: 372 KTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLA---IASK---AIIIGFN 425
+ GS E L E LK S+D VKI V +G +++ DI A + K A I+ F+
Sbjct: 848 QASTLGSLEALLEFLK--SSD-VKIPVSGIGIGPVHKKDIMKAGVMLEKKKEFATILAFD 904
Query: 426 VRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAE--IRQVI- 482
V+ A R+LA + KS I + +KKE I Q++
Sbjct: 905 VKISAEARELADKMGVKIFCDDTIYCLFDKFKSYIEGIKEEKKKETACEAVFPCILQILP 964
Query: 483 --LVNKVSKIA-GCYILEGLIRRDSKIRILRN-KNIIWTGELDSLKRFKDN 529
+ N+ I G + +G+++ + I I++ +N+ ++ + K+N
Sbjct: 965 NHIYNQRDPIILGVKVNDGILKVGTPICIVKRIENVRVFMDIGRVSSIKNN 1015
Score = 50 (22.7 bits), Expect = 2.0e-17, Sum P(4) = 2.0e-17
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 471 NLLGLAEIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNV 530
NLL ++ +I +NKV ++ G SK +R + TG D +K FK +
Sbjct: 606 NLLRRRNVKFIIALNKVDRLYGW--------EKSKNAPIRKTMMQQTG--DVVKEFKMRL 655
Query: 531 KEVKAGFECERLSRIENQIQRDISE 555
V+ F+ + L+ + R++ E
Sbjct: 656 NRVQNQFQEQGLNSMLYYKNREMGE 680
Score = 49 (22.3 bits), Expect = 2.0e-17, Sum P(4) = 2.0e-17
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGI 1140
+ S + G E K + F IL+ +P H N +P+ I+ ++ + + K+G
Sbjct: 935 FKSYIEGIKEEKKKETACEAV--FPCILQILPNHIYNQRDPI---ILGVKVNDGILKVGT 989
Query: 1141 GRILSGRIKSLQ 1152
+ RI++++
Sbjct: 990 PICIVKRIENVR 1001
Score = 40 (19.1 bits), Expect = 2.0e-17, Sum P(4) = 2.0e-17
Identities = 13/63 (20%), Positives = 28/63 (44%)
Query: 955 INARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLL 1014
+ M E++ +GI I ++ GT +++I P D + + +++V+
Sbjct: 779 VTGTYMPHREVKAAQGIKIAAQGLEHAIAGTALHVIG-PNE-DMEEAKKNAMEDIESVMN 836
Query: 1015 LID 1017
ID
Sbjct: 837 RID 839
>UNIPROTKB|Q9KUZ7 [details] [associations]
symbol:fusA1 "Elongation factor G 1" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006184
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 KO:K02355 HAMAP:MF_00054_B
TIGRFAMs:TIGR00484 ProtClustDB:PRK00007 PIR:C82332
RefSeq:NP_230015.1 ProteinModelPortal:Q9KUZ7 SMR:Q9KUZ7
PRIDE:Q9KUZ7 DNASU:2615040 GeneID:2615040 KEGG:vch:VC0361
PATRIC:20079795 OMA:GEICAFV Uniprot:Q9KUZ7
Length = 698
Score = 216 (81.1 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 56/135 (41%), Positives = 75/135 (55%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITI-------FSKN 977
I AHVD GKTT + +L +G K ++ A MD E+ERGITI F +
Sbjct: 15 ICAHVDAGKTTTTERILFYTGLSHKIGEVHDGAATMDWMVQEQERGITITSAATTTFWRG 74
Query: 978 CSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLG 1037
++ RINIIDTPGH DF EVER L ++D +++ G PQ+ V R+A K G
Sbjct: 75 MEAQFQEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGTSGVEPQSETVWRQADKYG 134
Query: 1038 FKPIVVVNKIDRSNA 1052
+V VNK+DR+ A
Sbjct: 135 VPRMVFVNKMDRAGA 149
Score = 159 (61.0 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 55/203 (27%), Positives = 92/203 (45%)
Query: 1114 HKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIR 1173
H D+ N P + ++G + R+ SG + S D V + K +I Q+
Sbjct: 308 HADD-NEPFSSLAFKIATDPFVGSLTFIRVYSGVVNS-GDAVYNSVKQKKERFGRIVQMH 365
Query: 1174 VFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNN 1233
K R + E +GDI G++++ G T+CDP+ L + EP + I V
Sbjct: 366 ANK---RDEIKEIRAGDIAAAIGLKDVTTGDTLCDPNHVVILERMEFPEPVIQI--AVEP 420
Query: 1234 SPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMR 1293
A +E I +L E + RV + +SG GELHL I+++ M+
Sbjct: 421 RSKADQEKMGIAL----GKLAAE---DPSFRVETDAETGQTL-ISGMGELHLDIIVDRMK 472
Query: 1294 RE-GYELSVSRPRVIFK-TLNGE 1314
RE G + +V +P+V ++ T+ G+
Sbjct: 473 REFGVDCNVGKPQVAYRETIRGK 495
Score = 116 (45.9 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 34/117 (29%), Positives = 53/117 (45%)
Query: 75 MGHVDHGKTSLLDYI---RKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTA 131
+G V H + +D++ ++ + + A T G H I +DTPGH FT
Sbjct: 40 IGEV-HDGAATMDWMVQEQERGITITSAATTTFWRGMEAQFQEH-RINIIDTPGHVDFTI 97
Query: 132 MRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRI 188
R +V D V+V GV PQ+ A GVP +V +NK+D+ + R+
Sbjct: 98 EVERSLRVLDGAVVVFCGTSGVEPQSETVWRQADKYGVPRMVFVNKMDRAGADFLRV 154
Score = 63 (27.2 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
L EP + + E G ++ LN R G ++ ++ + ++P + G+ +
Sbjct: 606 LLEPLMKVEITTPEDWMGDVVGDLNRRRGIIEGMDEGPAGLKIIHAKVPLSEMFGYATDL 665
Query: 1375 ITLTRGTGLISHVFEEYA 1392
+ T+G S F EYA
Sbjct: 666 RSATQGRASYSMEFAEYA 683
Score = 47 (21.6 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 1317 EPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFIT 1376
E + L + E++ II+ ++ G ++ N + ++ YR RG + +F+
Sbjct: 450 ETGQTLISGMGELHLDIIVDRMKREFG----VDCNVG-KPQVAYRETIRGKSEVEGKFVR 504
Query: 1377 LTRGTGLISHVFEEYAP 1393
+ G G HV+ + P
Sbjct: 505 QSGGRGQYGHVWLKIEP 521
Score = 39 (18.8 bits), Expect = 6.7e-08, Sum P(3) = 6.7e-08
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I HVD GKT+ + I
Sbjct: 13 IGICAHVDAGKTTTTERI 30
>TIGR_CMR|VC_0361 [details] [associations]
symbol:VC_0361 "elongation factor G" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003746 "translation elongation
factor activity" evidence=ISS] [GO:0006414 "translational
elongation" evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 KO:K02355 HAMAP:MF_00054_B TIGRFAMs:TIGR00484
ProtClustDB:PRK00007 PIR:C82332 RefSeq:NP_230015.1
ProteinModelPortal:Q9KUZ7 SMR:Q9KUZ7 PRIDE:Q9KUZ7 DNASU:2615040
GeneID:2615040 KEGG:vch:VC0361 PATRIC:20079795 OMA:GEICAFV
Uniprot:Q9KUZ7
Length = 698
Score = 216 (81.1 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 56/135 (41%), Positives = 75/135 (55%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITI-------FSKN 977
I AHVD GKTT + +L +G K ++ A MD E+ERGITI F +
Sbjct: 15 ICAHVDAGKTTTTERILFYTGLSHKIGEVHDGAATMDWMVQEQERGITITSAATTTFWRG 74
Query: 978 CSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLG 1037
++ RINIIDTPGH DF EVER L ++D +++ G PQ+ V R+A K G
Sbjct: 75 MEAQFQEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGTSGVEPQSETVWRQADKYG 134
Query: 1038 FKPIVVVNKIDRSNA 1052
+V VNK+DR+ A
Sbjct: 135 VPRMVFVNKMDRAGA 149
Score = 159 (61.0 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 55/203 (27%), Positives = 92/203 (45%)
Query: 1114 HKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIR 1173
H D+ N P + ++G + R+ SG + S D V + K +I Q+
Sbjct: 308 HADD-NEPFSSLAFKIATDPFVGSLTFIRVYSGVVNS-GDAVYNSVKQKKERFGRIVQMH 365
Query: 1174 VFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNN 1233
K R + E +GDI G++++ G T+CDP+ L + EP + I V
Sbjct: 366 ANK---RDEIKEIRAGDIAAAIGLKDVTTGDTLCDPNHVVILERMEFPEPVIQI--AVEP 420
Query: 1234 SPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMR 1293
A +E I +L E + RV + +SG GELHL I+++ M+
Sbjct: 421 RSKADQEKMGIAL----GKLAAE---DPSFRVETDAETGQTL-ISGMGELHLDIIVDRMK 472
Query: 1294 RE-GYELSVSRPRVIFK-TLNGE 1314
RE G + +V +P+V ++ T+ G+
Sbjct: 473 REFGVDCNVGKPQVAYRETIRGK 495
Score = 116 (45.9 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 34/117 (29%), Positives = 53/117 (45%)
Query: 75 MGHVDHGKTSLLDYI---RKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTA 131
+G V H + +D++ ++ + + A T G H I +DTPGH FT
Sbjct: 40 IGEV-HDGAATMDWMVQEQERGITITSAATTTFWRGMEAQFQEH-RINIIDTPGHVDFTI 97
Query: 132 MRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRI 188
R +V D V+V GV PQ+ A GVP +V +NK+D+ + R+
Sbjct: 98 EVERSLRVLDGAVVVFCGTSGVEPQSETVWRQADKYGVPRMVFVNKMDRAGADFLRV 154
Score = 63 (27.2 bits), Expect = 2.8e-26, Sum P(3) = 2.8e-26
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
L EP + + E G ++ LN R G ++ ++ + ++P + G+ +
Sbjct: 606 LLEPLMKVEITTPEDWMGDVVGDLNRRRGIIEGMDEGPAGLKIIHAKVPLSEMFGYATDL 665
Query: 1375 ITLTRGTGLISHVFEEYA 1392
+ T+G S F EYA
Sbjct: 666 RSATQGRASYSMEFAEYA 683
Score = 47 (21.6 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 1317 EPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFIT 1376
E + L + E++ II+ ++ G ++ N + ++ YR RG + +F+
Sbjct: 450 ETGQTLISGMGELHLDIIVDRMKREFG----VDCNVG-KPQVAYRETIRGKSEVEGKFVR 504
Query: 1377 LTRGTGLISHVFEEYAP 1393
+ G G HV+ + P
Sbjct: 505 QSGGRGQYGHVWLKIEP 521
Score = 39 (18.8 bits), Expect = 6.7e-08, Sum P(3) = 6.7e-08
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I HVD GKT+ + I
Sbjct: 13 IGICAHVDAGKTTTTERI 30
>UNIPROTKB|P62190 [details] [associations]
symbol:truB "tRNA pseudouridine synthase B" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
HAMAP:MF_01080 InterPro:IPR002501 InterPro:IPR014780
InterPro:IPR015225 InterPro:IPR020103 Pfam:PF01509 Pfam:PF09142
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842580 GO:GO:0003723 GO:GO:0008033
InterPro:IPR015947 SUPFAM:SSF88697 eggNOG:COG0130 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 KO:K03177 PANTHER:PTHR13767
TIGRFAMs:TIGR00431 HOGENOM:HOG000231225 OMA:QVPSKVS PIR:H70884
RefSeq:NP_217309.1 RefSeq:NP_337368.1 RefSeq:YP_006516239.1
PDB:1SGV PDBsum:1SGV ProteinModelPortal:P62190 SMR:P62190
PRIDE:P62190 EnsemblBacteria:EBMYCT00000003082
EnsemblBacteria:EBMYCT00000069933 GeneID:13317578 GeneID:888587
GeneID:925419 KEGG:mtc:MT2862.1 KEGG:mtu:Rv2793c
KEGG:mtv:RVBD_2793c PATRIC:18128048 TubercuList:Rv2793c
ProtClustDB:PRK03287 EvolutionaryTrace:P62190 Uniprot:P62190
Length = 298
Score = 309 (113.8 bits), Expect = 4.1e-26, P = 4.1e-26
Identities = 70/212 (33%), Positives = 109/212 (51%)
Query: 664 GVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSEA 723
G++++DKP G++S++ + + + + ++VG+ GTLDP ATG+L + ATK L+ A
Sbjct: 7 GIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAA 66
Query: 724 DKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALKY 783
K Y A I LG TT T D EG+++ +IE I+ + G+I Q+P SA+K
Sbjct: 67 PKSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKV 126
Query: 784 KGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPY----LTLRIHCSKGTYIRVLSEDI 839
G Y+ AR G + + I CS GTYIR L+ D+
Sbjct: 127 GGRRAYRLARQGRSVQLEARPIRIDRFELLAARRRDQLIDIDVEIDCSSGTYIRALARDL 186
Query: 840 GKMLGCGAHLKYLRRIGIDKLTLDKCLNIDTI 871
G LG G H+ LRR + + LD+ ++D +
Sbjct: 187 GDALGVGGHVTALRRTRVGRFELDQARSLDDL 218
>UNIPROTKB|H7C213 [details] [associations]
symbol:MTIF2 "Translation initiation factor IF-2,
mitochondrial" species:9606 "Homo sapiens" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR000795 Pfam:PF00009 GO:GO:0005525 GO:GO:0003924
GO:GO:0006184 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC012358
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156 HGNC:HGNC:7441
ChiTaRS:MTIF2 Ensembl:ENST00000418823 Bgee:H7C213 Uniprot:H7C213
Length = 301
Score = 308 (113.5 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 87/313 (27%), Positives = 161/313 (51%)
Query: 169 VPLIVAINKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISL 228
VP+I+A+NK DK + + +++K++L++ V+ E+YGG + +SA TG + L E
Sbjct: 1 VPIILAVNKCDKAEADPEKVKKELLAYDVVCEDYGGDVQAVPVSALTGDNLMALAEATVA 60
Query: 229 QAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSML 288
AE+LELKA P +G +IES DKG+G V T +IQ GTLR ++VAG + + R+
Sbjct: 61 LAEMLELKADPNGPVEGTVIESFTDKGRGLVTTAIIQRGTLRKGSVLVAGKCWAKPRA-- 118
Query: 289 NENGKNILEAGPSIPVEIQGLTKVPFSGEELFVILNEKKA--REIGLFRQGKFRDVKLSK 346
+ + V+ + + G+E I+ EK+ +E + K+ + K
Sbjct: 119 ----REV--------VDWRKYEQEQEKGQEDLKIIEEKRKEHKEAHQKAREKYGHLLWKK 166
Query: 347 QKLHKTENMFNDI------NKEKVKNLL-IIIKTDVYGSREVLTESLKNL-STDKVKIQV 398
+ + + I +E+ N+L +IIK DV GS E + + ++ + ++++
Sbjct: 167 RSILRFLERKEQIPLKPKEKRERDSNVLSVIIKGDVDGSVEAILNIIDTYDASHECELEL 226
Query: 399 IHNAVGNINESDINLAIASKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKS 458
+H VG+++ +D+NLA +I GFNV A ++ A ++++
Sbjct: 227 VHFGVGDVSANDVNLAETFDGVIYGFNVNAGNVIQQSAAKKGVKIKLHKIIYRLVEDLQE 286
Query: 459 EITNLIPLEKKEN 471
E+++ +P +E+
Sbjct: 287 ELSSRLPCAVEEH 299
>TIGR_CMR|GSU_2529 [details] [associations]
symbol:GSU_2529 "translation elongation factor G"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
HAMAP:MF_00054_B TIGRFAMs:TIGR00484 RefSeq:NP_953575.1
ProteinModelPortal:Q74A61 GeneID:2687810 KEGG:gsu:GSU2529
PATRIC:22027907 OMA:TFRVHED ProtClustDB:PRK13351
BioCyc:GSUL243231:GH27-2498-MONOMER Uniprot:Q74A61
Length = 689
Score = 232 (86.7 bits), Expect = 5.5e-26, Sum P(3) = 5.5e-26
Identities = 52/128 (40%), Positives = 75/128 (58%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
II+H+D GKTT+ + +L +G K ++ +MD E+ERGITI S +
Sbjct: 14 IISHIDAGKTTVSERILFYTGETHKMGEVHDGEAVMDWMPQEQERGITITSTATVCTWRN 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R+N++DTPGH DF EVER L ++D + + AVEG PQ+ V R+A + G I +
Sbjct: 74 HRLNLVDTPGHIDFTIEVERSLRVLDGAVTIFSAVEGVQPQSESVWRQADRYGVPRICFI 133
Query: 1045 NKIDRSNA 1052
NK+DR A
Sbjct: 134 NKMDRVGA 141
Score = 136 (52.9 bits), Expect = 5.5e-26, Sum P(3) = 5.5e-26
Identities = 46/170 (27%), Positives = 85/170 (50%)
Query: 1142 RILSGRIKSLQDVVIMNGPDDKPNK-AKINQIRVFKGLDRVLVNEALSGDIVLITGIEEI 1200
R+ SG IK+ + N K A++ ++ K R + EA +GDIV G++E+
Sbjct: 327 RVYSGTIKA--GGAVWNSSRGCFEKLARLFRMHAHK---REQIEEAAAGDIVAAAGLKEV 381
Query: 1201 CIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNN 1260
G T+CDP+ L L + EP +++ V + R+ K + + +L E
Sbjct: 382 LTGDTLCDPAHRIVLEGLAVPEPVVSL--AVEARGVDDRD-KLLPALE---KLQWEDPT- 434
Query: 1261 IGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK 1309
RV +++ ++G GELHL ++++ ++RE G + RP+V+++
Sbjct: 435 --FRVHEDEETGQTI-LTGMGELHLEVVVDRLQREFGVGVKTGRPQVVYR 481
Score = 122 (48.0 bits), Expect = 3.5e-14, Sum P(3) = 3.5e-14
Identities = 39/113 (34%), Positives = 58/113 (51%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVT--NHGSITFLDTPGHEAFTAM 132
MG V G+ +++D++ + + GIT A V T NH + +DTPGH FT
Sbjct: 39 MGEVHDGE-AVMDWMPQ-----EQERGITITSTA-TVCTWRNH-RLNLVDTPGHIDFTIE 90
Query: 133 RARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINL 185
R +V D V + +A +GV PQ+ A GVP I INK+D++ +L
Sbjct: 91 VERSLRVLDGAVTIFSAVEGVQPQSESVWRQADRYGVPRICFINKMDRVGADL 143
Score = 66 (28.3 bits), Expect = 5.5e-26, Sum P(3) = 5.5e-26
Identities = 19/78 (24%), Positives = 34/78 (43%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEIN-EKERVRLEYRIPSRGLIGFQNE 1373
L EP NL + I G ++ + + G ++ I + E +R +P + G+ E
Sbjct: 599 LLEPVMNLEIVIPADYAGKVLGSVQQKRGRIEGISSQGDTETIRAS--VPLAEMFGYMTE 656
Query: 1374 FITLTRGTGLISHVFEEY 1391
+ T+G G + F Y
Sbjct: 657 LRSATKGRGTYTMEFSHY 674
Score = 41 (19.5 bits), Expect = 5.1e-06, Sum P(3) = 5.1e-06
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I+ H+D GKT++ + I
Sbjct: 12 IGIISHIDAGKTTVSERI 29
>UNIPROTKB|Q2GD00 [details] [associations]
symbol:lepA "Elongation factor 4" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00071 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006297
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0006412 GO:GO:0003924 GO:GO:0006184
EMBL:CP000237 GenomeReviews:CP000237_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0481 HOGENOM:HOG000020624
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596 ProtClustDB:PRK05433
RefSeq:YP_506646.1 ProteinModelPortal:Q2GD00 STRING:Q2GD00
GeneID:3932063 KEGG:nse:NSE_0771 PATRIC:22681543
BioCyc:NSEN222891:GHFU-782-MONOMER Uniprot:Q2GD00
Length = 596
Score = 247 (92.0 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 57/137 (41%), Positives = 81/137 (59%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAH+DHGK+TL D L+ + + + +++DS +IE+ERGITI S+ ++Y
Sbjct: 8 AIIAHIDHGKSTLADRLMEECKAVDPRK-MKEQLLDSMKIERERGITIKSQTVMLKYTAK 66
Query: 986 R-----INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+N+IDTPGH DF EV R L+ + LL++DA +G QT KA+
Sbjct: 67 DNEDYVLNLIDTPGHVDFSYEVSRSLAACEGSLLIVDATQGLEAQTLANVYKAIDNDHAI 126
Query: 1041 IVVVNKIDRSNARPEWV 1057
I V+NKID +A PE V
Sbjct: 127 IPVINKIDLDSAEPERV 143
Score = 136 (52.9 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 88/335 (26%), Positives = 148/335 (44%)
Query: 1087 GYANENS---KARQGNMIP-LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGR 1142
G + EN+ A+ G I L E+I+KY+P + + + LQ +I Y YLG + + R
Sbjct: 152 GISTENAVEVSAKLGTGIADLLESIVKYIPPPEGDVSERLQALLIDSWYDIYLGVVILVR 211
Query: 1143 ILSGRIKSLQDVVIM-NGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITG-IEEI 1200
+ +G IKS + +M NG NK + ++ +F R V E +G+I +T I+
Sbjct: 212 VKNGSIKSGMTIEMMSNG-----NKYCVEKVGIFTPEKRN-VTELRAGEIGFLTASIKNA 265
Query: 1201 --C-IGSTICDPSKP--NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDH 1255
C +G TI D P LP P + + P++ E F RQ +L H
Sbjct: 266 RDCNVGDTITDAKNPCTEHLPGFKQLRPVVFCSLF----PVSSDE--FEKLRQSLEKL-H 318
Query: 1256 EIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKT-LN 1312
++ + + G LHL ++ + + E ++L++ + P V+++ +
Sbjct: 319 LNDSSFTFESESSSALGHGFRCGFLGMLHLEVITQRLDEE-FDLALVLTAPSVVYRIHMK 377
Query: 1313 G----ELYEPYENLFVD-IEEINQGIIMQKLNYRG---GDLKNIEINEKERVRLEYRIPS 1364
ELY P E I+ I + I + G G++ N+ NEK +++
Sbjct: 378 DSSVLELYNPTEMPDPSKIDHIEEPWIKASVMLPGDYIGEVINL-CNEKRGEQID----- 431
Query: 1365 RGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
L+ N+ I LT G L VF+ FY+K K
Sbjct: 432 --LVYVDNKAI-LTYGLPLSEIVFD----FYDKLK 459
>TIGR_CMR|NSE_0771 [details] [associations]
symbol:NSE_0771 "GTP-binding protein LepA" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:CP000237 GenomeReviews:CP000237_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:YP_506646.1 ProteinModelPortal:Q2GD00
STRING:Q2GD00 GeneID:3932063 KEGG:nse:NSE_0771 PATRIC:22681543
BioCyc:NSEN222891:GHFU-782-MONOMER Uniprot:Q2GD00
Length = 596
Score = 247 (92.0 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 57/137 (41%), Positives = 81/137 (59%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAH+DHGK+TL D L+ + + + +++DS +IE+ERGITI S+ ++Y
Sbjct: 8 AIIAHIDHGKSTLADRLMEECKAVDPRK-MKEQLLDSMKIERERGITIKSQTVMLKYTAK 66
Query: 986 R-----INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+N+IDTPGH DF EV R L+ + LL++DA +G QT KA+
Sbjct: 67 DNEDYVLNLIDTPGHVDFSYEVSRSLAACEGSLLIVDATQGLEAQTLANVYKAIDNDHAI 126
Query: 1041 IVVVNKIDRSNARPEWV 1057
I V+NKID +A PE V
Sbjct: 127 IPVINKIDLDSAEPERV 143
Score = 136 (52.9 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 88/335 (26%), Positives = 148/335 (44%)
Query: 1087 GYANENS---KARQGNMIP-LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGR 1142
G + EN+ A+ G I L E+I+KY+P + + + LQ +I Y YLG + + R
Sbjct: 152 GISTENAVEVSAKLGTGIADLLESIVKYIPPPEGDVSERLQALLIDSWYDIYLGVVILVR 211
Query: 1143 ILSGRIKSLQDVVIM-NGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITG-IEEI 1200
+ +G IKS + +M NG NK + ++ +F R V E +G+I +T I+
Sbjct: 212 VKNGSIKSGMTIEMMSNG-----NKYCVEKVGIFTPEKRN-VTELRAGEIGFLTASIKNA 265
Query: 1201 --C-IGSTICDPSKP--NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDH 1255
C +G TI D P LP P + + P++ E F RQ +L H
Sbjct: 266 RDCNVGDTITDAKNPCTEHLPGFKQLRPVVFCSLF----PVSSDE--FEKLRQSLEKL-H 318
Query: 1256 EIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKT-LN 1312
++ + + G LHL ++ + + E ++L++ + P V+++ +
Sbjct: 319 LNDSSFTFESESSSALGHGFRCGFLGMLHLEVITQRLDEE-FDLALVLTAPSVVYRIHMK 377
Query: 1313 G----ELYEPYENLFVD-IEEINQGIIMQKLNYRG---GDLKNIEINEKERVRLEYRIPS 1364
ELY P E I+ I + I + G G++ N+ NEK +++
Sbjct: 378 DSSVLELYNPTEMPDPSKIDHIEEPWIKASVMLPGDYIGEVINL-CNEKRGEQID----- 431
Query: 1365 RGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
L+ N+ I LT G L VF+ FY+K K
Sbjct: 432 --LVYVDNKAI-LTYGLPLSEIVFD----FYDKLK 459
>CGD|CAL0005338 [details] [associations]
symbol:orf19.5483 species:5476 "Candida albicans" [GO:0043022
"ribosome binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005761 "mitochondrial ribosome" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] HAMAP:MF_00071
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 CGD:CAL0005338 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SUPFAM:SSF54980 eggNOG:COG0481
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 EMBL:AACQ01000196 EMBL:AACQ01000195
RefSeq:XP_711475.1 RefSeq:XP_711499.1 ProteinModelPortal:Q59P53
STRING:Q59P53 GeneID:3646884 GeneID:3646908 KEGG:cal:CaO19.12938
KEGG:cal:CaO19.5483 Uniprot:Q59P53
Length = 654
Score = 249 (92.7 bits), Expect = 8.2e-26, Sum P(3) = 8.2e-26
Identities = 56/151 (37%), Positives = 87/151 (57%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+I+AHVDHGK+TL D LL +G + ++++D ++E+ERGIT+ ++ S+ YN
Sbjct: 63 SIVAHVDHGKSTLSDRLLEMTGVIKPGSK--SQVLDKLDVERERGITVKAQTVSMFYNDG 120
Query: 986 R----INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ ++++DTPGH DF EV R + LLL+DA +G QT A +G K I
Sbjct: 121 KQDYLLHLVDTPGHVDFRAEVSRSYASCGGALLLVDASQGVQAQTVANFYLAYSMGLKLI 180
Query: 1042 VVVNKIDRSNAR-P--EWVVDATFDLFDKLC 1069
++NKID +A P ++ TF+L C
Sbjct: 181 PIINKIDLDSANIPGAREQIETTFELDPNEC 211
Score = 132 (51.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 71/277 (25%), Positives = 120/277 (43%)
Query: 11 NLMKLGQMVTINQVLDQETAMILVEEM----GHVAHASKLNDP-ESFLLNEY-NKNITA- 63
N +K G ++T + L + VE+M G + L + + + Y N +I A
Sbjct: 9 NTLKYGCLLT-KRWLTTSKLLYSVEDMKIKIGQEQYRKALEERIDKIPIENYRNFSIVAH 67
Query: 64 ----ESLVRAPIVTIMGHVDHG-KTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSI 118
+S + ++ + G + G K+ +LD K +V GIT ++ N G
Sbjct: 68 VDHGKSTLSDRLLEMTGVIKPGSKSQVLD---KLDV--ERERGITVKAQTVSMFYNDGKQ 122
Query: 119 TFL----DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA 174
+L DTPGH F A +R +L+V A GV QT A G+ LI
Sbjct: 123 DYLLHLVDTPGHVDFRAEVSRSYASCGGALLLVDASQGVQAQTVANFYLAYSMGLKLIPI 182
Query: 175 INKIDKLDINLDRIKQDLISE-QVIPEEYGGASPFISISAKTGVGINKLLENISLQAEIL 233
INKID N+ ++ + + ++ P E I +SAKTG+ + +++ ++ I
Sbjct: 183 INKIDLDSANIPGAREQIETTFELDPNEC------IPVSAKTGLNVEQIIPSVI--KNIP 234
Query: 234 ELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLR 270
V P + ++++S D G V V I G ++
Sbjct: 235 SPVCDVNKPLRALLVDSWHDPYVGVVMLVHIVDGRMK 271
Score = 112 (44.5 bits), Expect = 8.2e-26, Sum P(3) = 8.2e-26
Identities = 53/235 (22%), Positives = 108/235 (45%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G N+ + +++K +P + N PL+ ++ + Y+G + + I+ GR+K +
Sbjct: 216 AKTGLNVEQIIPSVIKNIPSPVCDVNKPLRALLVDSWHDPYVGVVMLVHIVDGRMK--KG 273
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIV-LITGIE---EICIGSTICDP 1209
+ I++ ++ K ++ + DR + +G + +I G++ E +G T
Sbjct: 274 MKILSAHTNRTYDVK--EVGIMYP-DRTPTSFIKAGQVAYIIPGMKNPREALVGDTFYQM 330
Query: 1210 SKPNGL-PMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNI--GLRVT 1266
K GL P+ +EP + V P G+E F N +D +++N + VT
Sbjct: 331 GKHEGLEPLPGFEEPKPMV--FVGAFPADGKE--F-------NAMDDQMQNLVLNDRSVT 379
Query: 1267 QNKHDDSIYEVSGR----GELHLTILIENMRRE-GYELSVSRPRVIFKTL--NGE 1314
+ + + R G LH ++ E + +E G ++ ++ P V +K + NGE
Sbjct: 380 LEQETSNALGLGWRLGFLGSLHASVFKERLEKEYGAKIILTAPTVPYKIIYKNGE 434
Score = 69 (29.3 bits), Expect = 8.2e-26, Sum P(3) = 8.2e-26
Identities = 43/159 (27%), Positives = 67/159 (42%)
Query: 1314 ELY-EPYENLFVDIEEINQGIIMQK-LNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQ 1371
E Y EPY + + G +M LN RG + K IE +V L+Y IP+ L+
Sbjct: 454 ESYMEPYVEAIMTVPNEYVGNVMTLCLNNRG-EQKEIEYLTTGQVLLKYEIPTSQLV--- 509
Query: 1372 NEFITLTRGT--GLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDR 1429
+F +G G S +EE Y KS D+ K + V + Q R
Sbjct: 510 EDFFGKLKGCTKGYASLDYEEAG--YRKS--DIVKMQLCVNGEPQDALTTVIHRSQAQAR 565
Query: 1430 GRLFINH--NDLVYEGMIIGIHSRDNDLLV--NPIKEKQ 1464
G+ ++ L Y+ + I ++ N+ +V IK K+
Sbjct: 566 GKEYVTRFKKFLSYQLFEVAIQAKINNKVVARETIKAKR 604
>UNIPROTKB|Q2GGA6 [details] [associations]
symbol:lepA "Elongation factor 4" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003924 GO:GO:0006184
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:YP_507527.1 ProteinModelPortal:Q2GGA6
STRING:Q2GGA6 GeneID:3927611 KEGG:ech:ECH_0724 PATRIC:20576892
BioCyc:ECHA205920:GJNR-727-MONOMER Uniprot:Q2GGA6
Length = 598
Score = 236 (88.1 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 53/137 (38%), Positives = 85/137 (62%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAH+DHGK+TL D L+ + + + + +++DS +IE+ERGITI ++ + Y
Sbjct: 10 AIIAHIDHGKSTLADRLIEECNGLDERE-MKDQVLDSMDIERERGITIKAQTVRLAYKAK 68
Query: 983 NGTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+G +N++DTPGH DF EV R L+ + LL++D+ +G QT KA+ +
Sbjct: 69 DGQTYYLNLMDTPGHVDFSYEVSRSLAACEGSLLIVDSSQGVEAQTLANVYKAIDSNHEI 128
Query: 1041 IVVVNKIDRSNARPEWV 1057
I V+NKID +++ P+ V
Sbjct: 129 IPVLNKIDLASSDPDKV 145
Score = 146 (56.5 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 75/318 (23%), Positives = 145/318 (45%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ EAI+ +P S NPL+ ++ Y +YLG + + RI G I+ +V+M+
Sbjct: 174 VLEAIVSRLPAPSGKSENPLKAILVDTWYDTYLGIVILLRIKDGVIRKGMKIVMMS---- 229
Query: 1163 KPNKA--KINQIRVFKGLDRVLVNEALSGDIVLITG-IEEI--C-IGSTICDPSKPNGLP 1216
N A +++ + +F +V V++ G+I IT I+E+ C +G TI + + P
Sbjct: 230 --NNAVYQVDNVGIFTPHKKV-VDQLSVGEIGFITASIKELSDCKVGDTITEEQRRCSEP 286
Query: 1217 MLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLD-HEIKNNIGLRVTQNKHDDSIY 1275
+ TI+ +V S G+F R+ +L ++ + V+ N +
Sbjct: 287 LPGFR----TIHPVVFCSIFPNEAGEFERLREALKKLQLNDASFTFEIEVS-NALGYG-F 340
Query: 1276 EVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK--TLNGEL---YEPYE-NLFVDIEE 1328
G LHL ++ E + RE +L+ + P VI++ T +G++ + P++ DI
Sbjct: 341 RCGFLGMLHLEVIQERLEREFNLDLTATAPGVIYQVTTRSGDVRKVHNPHDFGESQDIAN 400
Query: 1329 INQ--------------GIIMQKLNYRGGDLKNIEINEKERVRLEYRIP-SRGLIGFQNE 1373
I + G+IM N + G+ ++ + + L+YR+P S + F +
Sbjct: 401 IKEPWICATIMVPDQYLGVIMSLCNNKRGEKLDLSYSGNTAL-LKYRLPLSEVVFDFYDR 459
Query: 1374 FITLTRGTGLISHVFEEY 1391
++++G + +EY
Sbjct: 460 IKSMSKGYASLDWEMDEY 477
Score = 145 (56.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 46/156 (29%), Positives = 77/156 (49%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R + +L+V + GV QT + A S +I +NK
Sbjct: 75 LNLMDTPGHVDFSYEVSRSLAACEGSLLIVDSSQGVEAQTLANVYKAIDSNHEIIPVLNK 134
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + D++K + E +I + AS + +SAK+G+GI +LE I + L A
Sbjct: 135 IDLASSDPDKVKLQI--EDMIGID---ASESLLVSAKSGIGIQDVLEAI-----VSRLPA 184
Query: 238 PV---TTPAKGVIIESRLDKGKGPVATVLIQSGTLR 270
P P K +++++ D G V + I+ G +R
Sbjct: 185 PSGKSENPLKAILVDTWYDTYLGIVILLRIKDGVIR 220
Score = 40 (19.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 495 ILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEV 533
I +G+IR+ KI ++ N N ++ ++D++ F + K V
Sbjct: 214 IKDGVIRKGMKIVMMSN-NAVY--QVDNVGIFTPHKKVV 249
>TIGR_CMR|ECH_0724 [details] [associations]
symbol:ECH_0724 "GTP-binding protein LepA" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003924 GO:GO:0006184
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:YP_507527.1 ProteinModelPortal:Q2GGA6
STRING:Q2GGA6 GeneID:3927611 KEGG:ech:ECH_0724 PATRIC:20576892
BioCyc:ECHA205920:GJNR-727-MONOMER Uniprot:Q2GGA6
Length = 598
Score = 236 (88.1 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 53/137 (38%), Positives = 85/137 (62%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
AIIAH+DHGK+TL D L+ + + + + +++DS +IE+ERGITI ++ + Y
Sbjct: 10 AIIAHIDHGKSTLADRLIEECNGLDERE-MKDQVLDSMDIERERGITIKAQTVRLAYKAK 68
Query: 983 NGTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+G +N++DTPGH DF EV R L+ + LL++D+ +G QT KA+ +
Sbjct: 69 DGQTYYLNLMDTPGHVDFSYEVSRSLAACEGSLLIVDSSQGVEAQTLANVYKAIDSNHEI 128
Query: 1041 IVVVNKIDRSNARPEWV 1057
I V+NKID +++ P+ V
Sbjct: 129 IPVLNKIDLASSDPDKV 145
Score = 146 (56.5 bits), Expect = 8.3e-26, Sum P(2) = 8.3e-26
Identities = 75/318 (23%), Positives = 145/318 (45%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ EAI+ +P S NPL+ ++ Y +YLG + + RI G I+ +V+M+
Sbjct: 174 VLEAIVSRLPAPSGKSENPLKAILVDTWYDTYLGIVILLRIKDGVIRKGMKIVMMS---- 229
Query: 1163 KPNKA--KINQIRVFKGLDRVLVNEALSGDIVLITG-IEEI--C-IGSTICDPSKPNGLP 1216
N A +++ + +F +V V++ G+I IT I+E+ C +G TI + + P
Sbjct: 230 --NNAVYQVDNVGIFTPHKKV-VDQLSVGEIGFITASIKELSDCKVGDTITEEQRRCSEP 286
Query: 1217 MLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLD-HEIKNNIGLRVTQNKHDDSIY 1275
+ TI+ +V S G+F R+ +L ++ + V+ N +
Sbjct: 287 LPGFR----TIHPVVFCSIFPNEAGEFERLREALKKLQLNDASFTFEIEVS-NALGYG-F 340
Query: 1276 EVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK--TLNGEL---YEPYE-NLFVDIEE 1328
G LHL ++ E + RE +L+ + P VI++ T +G++ + P++ DI
Sbjct: 341 RCGFLGMLHLEVIQERLEREFNLDLTATAPGVIYQVTTRSGDVRKVHNPHDFGESQDIAN 400
Query: 1329 INQ--------------GIIMQKLNYRGGDLKNIEINEKERVRLEYRIP-SRGLIGFQNE 1373
I + G+IM N + G+ ++ + + L+YR+P S + F +
Sbjct: 401 IKEPWICATIMVPDQYLGVIMSLCNNKRGEKLDLSYSGNTAL-LKYRLPLSEVVFDFYDR 459
Query: 1374 FITLTRGTGLISHVFEEY 1391
++++G + +EY
Sbjct: 460 IKSMSKGYASLDWEMDEY 477
Score = 145 (56.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 46/156 (29%), Positives = 77/156 (49%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R + +L+V + GV QT + A S +I +NK
Sbjct: 75 LNLMDTPGHVDFSYEVSRSLAACEGSLLIVDSSQGVEAQTLANVYKAIDSNHEIIPVLNK 134
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + D++K + E +I + AS + +SAK+G+GI +LE I + L A
Sbjct: 135 IDLASSDPDKVKLQI--EDMIGID---ASESLLVSAKSGIGIQDVLEAI-----VSRLPA 184
Query: 238 PV---TTPAKGVIIESRLDKGKGPVATVLIQSGTLR 270
P P K +++++ D G V + I+ G +R
Sbjct: 185 PSGKSENPLKAILVDTWYDTYLGIVILLRIKDGVIR 220
Score = 40 (19.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 495 ILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEV 533
I +G+IR+ KI ++ N N ++ ++D++ F + K V
Sbjct: 214 IKDGVIRKGMKIVMMSN-NAVY--QVDNVGIFTPHKKVV 249
>SGD|S000004280 [details] [associations]
symbol:GUF1 "Mitochondrial matrix GTPase associated with
mitochondrial ribosomes" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA;ISS;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA;IDA] [GO:0043022 "ribosome
binding" evidence=IEA;IDA] [GO:0045727 "positive regulation of
translation" evidence=IEA;IMP] [GO:0005761 "mitochondrial ribosome"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 SGD:S000004280 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743
GO:GO:0005759 GO:GO:0006412 GO:GO:0003924 EMBL:BK006945
GO:GO:0043022 EMBL:U17243 GO:GO:0045727 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022
SUPFAM:SSF54980 eggNOG:COG0481 HOGENOM:HOG000020624
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 GeneTree:ENSGT00550000074940 OMA:KCYGGDA
OrthoDB:EOG4PCF1D EMBL:U22360 PIR:S50374 RefSeq:NP_013392.1
ProteinModelPortal:P46943 SMR:P46943 DIP:DIP-2842N IntAct:P46943
MINT:MINT-688936 STRING:P46943 PaxDb:P46943 EnsemblFungi:YLR289W
GeneID:850996 KEGG:sce:YLR289W CYGD:YLR289w BindingDB:P46943
ChEMBL:CHEMBL1250406 NextBio:967531 Genevestigator:P46943
GermOnline:YLR289W Uniprot:P46943
Length = 645
Score = 280 (103.6 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 79/236 (33%), Positives = 119/236 (50%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+I+AHVDHGK+TL D LL + N N +++D E+E+ERGITI ++ CS+ Y
Sbjct: 50 SIVAHVDHGKSTLSDRLLEITHVIDPNAR-NKQVLDKLEVERERGITIKAQTCSMFYKDK 108
Query: 986 R------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFK 1039
R +++IDTPGH DF GEV R + +LL+DA +G QT A LG K
Sbjct: 109 RTGKNYLLHLIDTPGHVDFRGEVSRSYASCGGAILLVDASQGIQAQTVANFYLAFSLGLK 168
Query: 1040 PIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGN 1099
I V+NKID + + V D + F+ EE +I SA G E
Sbjct: 169 LIPVINKIDLNFTDVKQVKDQIVNNFE---LPEED----IIGVSAKTGLNVEEL------ 215
Query: 1100 MIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVV 1155
++P AI+ +P + P + ++ Y +YLG + + I+ G ++ V+
Sbjct: 216 LLP---AIIDRIPPPTGRPDKPFRALLVDSWYDAYLGAVLLVNIVDGSVRKNDKVI 268
Score = 156 (60.0 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 50/159 (31%), Positives = 77/159 (48%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH F +R +L+V A G+ QT A G+ LI INKID
Sbjct: 119 IDTPGHVDFRGEVSRSYASCGGAILLVDASQGIQAQTVANFYLAFSLGLKLIPVINKIDL 178
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
++ ++K +++ +PEE I +SAKTG+ + +LL L A I + P
Sbjct: 179 NFTDVKQVKDQIVNNFELPEE-----DIIGVSAKTGLNVEELL----LPAIIDRIPPPTG 229
Query: 241 TPAK---GVIIESRLDKGKGPVATVLIQSGTLRCSDIVV 276
P K ++++S D G V V I G++R +D V+
Sbjct: 230 RPDKPFRALLVDSWYDAYLGAVLLVNIVDGSVRKNDKVI 268
Score = 100 (40.3 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 91/435 (20%), Positives = 174/435 (40%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
L AI+ +P + P + ++ Y +YLG + + I+ G ++ V+ +
Sbjct: 216 LLPAIIDRIPPPTGRPDKPFRALLVDSWYDAYLGAVLLVNIVDGSVRKNDKVICAQTKE- 274
Query: 1163 KPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIE---EICIGSTICDPSKPNGLPML 1218
K ++ I + DR +G + L+ G++ E IG TI SK N +L
Sbjct: 275 ---KYEVKDIGIMYP-DRTSTGTLKTGQVGYLVLGMKDSKEAKIGDTIMHLSKVNETEVL 330
Query: 1219 NIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGL-RVTQNKHDDSIYEV 1277
E + F V P G E K + + L+ ++ L R T N + +
Sbjct: 331 PGFEEQKPMVF-VGAFPADGIEFKAMDDDMSRLVLNDR---SVTLERETSNALGQG-WRL 385
Query: 1278 SGRGELHLTILIENMRRE-GYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQ 1336
G LH ++ E + +E G +L +++P V + E + + L + +E G +
Sbjct: 386 GFLGSLHASVFRERLEKEYGSKLIITQPTVPYLV---EFTDGKKKLITNPDEFPDGAT-K 441
Query: 1337 KLN---YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
++N + ++ + +E + R+ G Q + IT G + + + Y P
Sbjct: 442 RVNVAAFHEPFIEAVMTLPQEYLGSVIRLCDSNR-GEQID-ITYLNTNGQV--MLKYYLP 497
Query: 1394 FYNKSKYDLGKRRN---GVLISQYSGKAVAYS-LWKLQDRGRLFINHNDLVYEGMIIGIH 1449
+ GK ++ G Y S + KLQ L +N N + + + +H
Sbjct: 498 LSHLVDDFFGKLKSVSRGFASLDYEDAGYRISDVVKLQ----LLVNGNAI--DALSRVLH 551
Query: 1450 SRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRL 1509
+ + + +K ++S + IQ + KI I+ D L ++ ++
Sbjct: 552 KSEVERVGREWVKKFKEYVKSQLYEVVIQARANNKIIARETIKARRKDVLQKLHASDVSR 611
Query: 1510 RKRFL-KENERKKKL 1523
RK+ L K+ E KK +
Sbjct: 612 RKKLLAKQKEGKKHM 626
Score = 56 (24.8 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 73 TIMGHVDHGKTSLLDYIRK-TNVV 95
+I+ HVDHGK++L D + + T+V+
Sbjct: 50 SIVAHVDHGKSTLSDRLLEITHVI 73
>UNIPROTKB|P0A556 [details] [associations]
symbol:fusA "Elongation factor G" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005737
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
EMBL:BX842574 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
HAMAP:MF_00054_B TIGRFAMs:TIGR00484 OMA:QEPGKGY
ProtClustDB:PRK00007 PIR:E70827 RefSeq:NP_335124.1
RefSeq:YP_006514027.1 RefSeq:YP_177746.1 ProteinModelPortal:P0A556
SMR:P0A556 PRIDE:P0A556 EnsemblBacteria:EBMYCT00000000909
EnsemblBacteria:EBMYCT00000072551 GeneID:13318572 GeneID:888240
GeneID:925997 KEGG:mtc:MT0712 KEGG:mtu:Rv0684 KEGG:mtv:RVBD_0684
PATRIC:18123291 TubercuList:Rv0684 Uniprot:P0A556
Length = 701
Score = 223 (83.6 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 54/128 (42%), Positives = 74/128 (57%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L +G K ++ A MD E E+ERGITI S + +
Sbjct: 18 IMAHIDAGKTTTTERILYYTGINYKIGEVHDGAATMDWMEQEQERGITITSAATTTFWKD 77
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
++NIIDTPGH DF EVER L ++D + + D EG PQ+ V R+A K I V
Sbjct: 78 NQLNIIDTPGHVDFTVEVERNLRVLDGAVAVFDGKEGVEPQSEQVWRQADKYDVPRICFV 137
Query: 1045 NKIDRSNA 1052
NK+D+ A
Sbjct: 138 NKMDKIGA 145
Score = 138 (53.6 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 45/198 (22%), Positives = 88/198 (44%)
Query: 1113 VHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQI 1172
V K ++ P + + GK+ R+ SG ++S V+ N K K ++ ++
Sbjct: 305 VRKATTDEPFAALAFKIATHPFFGKLTYIRVYSGTVESGSQVI--NATKGK--KERLGKL 360
Query: 1173 RVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVN 1232
V+ A +G I + G+++ G T+ DP++ L + +P + + +
Sbjct: 361 FQMHSNKENPVDRASAGHIYAVIGLKDTTTGDTLSDPNQQIVLESMTFPDPVIEV--AIE 418
Query: 1233 NSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENM 1292
+ +E ++ +++ D K ++ Q + G GELHL IL++ M
Sbjct: 419 PKTKSDQEKLSLSIQKLAEE-DPTFKVHLDSETGQTV-------IGGMGELHLDILVDRM 470
Query: 1293 RRE-GYELSVSRPRVIFK 1309
RRE E +V +P+V +K
Sbjct: 471 RREFKVEANVGKPQVAYK 488
Score = 124 (48.7 bits), Expect = 7.6e-15, Sum P(4) = 7.6e-15
Identities = 48/190 (25%), Positives = 77/190 (40%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G V H + +D++ + + GIT A + +DTPGH FT
Sbjct: 43 IGEV-HDGAATMDWMEQ-----EQERGITITSAATTTFWKDNQLNIIDTPGHVDFTVEVE 96
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKL--DINLD-RIKQD 191
R +V D V V +GV PQ+ + A VP I +NK+DK+ D R +
Sbjct: 97 RNLRVLDGAVAVFDGKEGVEPQSEQVWRQADKYDVPRICFVNKMDKIGADFYFSVRTMGE 156
Query: 192 LISEQVIP--------EEYGGASPFISISAKTGVGINKLLEN---ISLQAEILELKAPVT 240
+ +P ++ G + ++AK G KL E + + A++ E
Sbjct: 157 RLGANAVPIQLPVGAEADFEGVVDLVEMNAKVWRGETKLGETYDTVEIPADLAEQAEEYR 216
Query: 241 TPAKGVIIES 250
T V+ ES
Sbjct: 217 TKLLEVVAES 226
Score = 70 (29.7 bits), Expect = 1.4e-25, Sum P(3) = 1.4e-25
Identities = 24/91 (26%), Positives = 41/91 (45%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
+ EP + V E G ++ LN R G ++ +E RV + +P + G+ +
Sbjct: 608 ILEPIMAVEVTTPEDYMGDVIGDLNSRRGQIQAMEERAGARV-VRAHVPLSEMFGYVGDL 666
Query: 1375 ITLTRGTGLISHVFEEYAPF-YNKSKYDLGK 1404
+ T+G S VF+ Y+ N SK + K
Sbjct: 667 RSKTQGRANYSMVFDSYSEVPANVSKEIIAK 697
Score = 43 (20.2 bits), Expect = 7.6e-15, Sum P(4) = 7.6e-15
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 74 IMGHVDHGKTSLLDYI 89
IM H+D GKT+ + I
Sbjct: 18 IMAHIDAGKTTTTERI 33
>TAIR|locus:2026212 [details] [associations]
symbol:SCO1 "SNOWY COTYLEDON 1" species:3702 "Arabidopsis
thaliana" [GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0006414
"translational elongation" evidence=IEA] [GO:0008135 "translation
factor activity, nucleic acid binding" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009658 "chloroplast organization" evidence=RCA;IMP]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0009845
"seed germination" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0006354 "DNA-dependent transcription, elongation" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010207 "photosystem II
assembly" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0016226
"iron-sulfur cluster assembly" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0043085 "positive regulation of
catalytic activity" evidence=RCA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=RCA] [GO:0048481 "ovule
development" evidence=RCA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684 GO:GO:0005739
GO:GO:0005524 GO:GO:0009570 GO:GO:0048046 GO:GO:0003924
GO:GO:0006184 GO:GO:0009941 GO:GO:0009658 GO:GO:0009845
GO:GO:0003746 EMBL:AC007190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 KO:K02355 HAMAP:MF_00054_B TIGRFAMs:TIGR00484
OMA:GEICAFV HSSP:P13551 ProtClustDB:CLSN2681893 UniGene:At.21185
UniGene:At.48334 EMBL:AY142646 EMBL:BK005771 IPI:IPI00533633
PIR:E96652 RefSeq:NP_564801.1 ProteinModelPortal:Q9SI75 SMR:Q9SI75
STRING:Q9SI75 PRIDE:Q9SI75 ProMEX:Q9SI75 EnsemblPlants:AT1G62750.1
GeneID:842573 KEGG:ath:AT1G62750 TAIR:At1g62750 InParanoid:Q9SI75
PhylomeDB:Q9SI75 Genevestigator:Q9SI75 Uniprot:Q9SI75
Length = 783
Score = 240 (89.5 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 58/128 (45%), Positives = 76/128 (59%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L +G K ++ MD E E+ERGITI S + ++
Sbjct: 101 IMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWDK 160
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINIIDTPGH DF EVER L ++D + L D+V G PQ+ V R+A K G I V
Sbjct: 161 HRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFV 220
Query: 1045 NKIDRSNA 1052
NK+DR A
Sbjct: 221 NKMDRLGA 228
Score = 141 (54.7 bits), Expect = 2.8e-25, Sum P(2) = 2.8e-25
Identities = 45/198 (22%), Positives = 91/198 (45%)
Query: 1113 VHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQI 1172
+ K + + P + ++G + R+ SG+I + ++N +K K +I ++
Sbjct: 387 IRKPDDDEPFAGLAFKIMSDPFVGSLTFVRVYSGKISA--GSYVLNA--NKGKKERIGRL 442
Query: 1173 RVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVN 1232
R V AL+GDI+ + G+++ G T+ DP P L ++ +P + +
Sbjct: 443 LEMHANSREDVKVALTGDIIALAGLKDTITGETLSDPENPVVLERMDFPDPVIKVAI--- 499
Query: 1233 NSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENM 1292
P + + T IK L E + ++++ + + G GELHL I+++ +
Sbjct: 500 -EPKTKADIDKMATGLIK--LAQE---DPSFHFSRDEEMNQTV-IEGMGELHLEIIVDRL 552
Query: 1293 RRE-GYELSVSRPRVIFK 1309
+RE E +V P+V ++
Sbjct: 553 KREFKVEANVGAPQVNYR 570
Score = 122 (48.0 bits), Expect = 7.5e-12, Sum P(3) = 7.5e-12
Identities = 37/119 (31%), Positives = 56/119 (47%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G V G T+ +D++ + + GIT A + I +DTPGH FT
Sbjct: 126 IGEVHEG-TATMDWMEQ-----EQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVE 179
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLI 193
R +V D + + + GV PQ+ A GVP I +NK+D+L N R + D+I
Sbjct: 180 RALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTR-DMI 237
Score = 44 (20.5 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ IM H+D GKT+ + I
Sbjct: 99 IGIMAHIDAGKTTTTERI 116
Score = 40 (19.1 bits), Expect = 7.5e-12, Sum P(3) = 7.5e-12
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 506 IRILRNKNIIWTGE 519
+ ++R K I+W+GE
Sbjct: 262 VDLVRMKAIVWSGE 275
>TIGR_CMR|DET_0472 [details] [associations]
symbol:DET_0472 "translation elongation factor G"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:CP000027
GenomeReviews:CP000027_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
HAMAP:MF_00054_B TIGRFAMs:TIGR00484 OMA:GEICAFV
ProtClustDB:PRK12739 RefSeq:YP_181216.1 ProteinModelPortal:Q3Z983
STRING:Q3Z983 GeneID:3230157 KEGG:det:DET0472 PATRIC:21608013
BioCyc:DETH243164:GJNF-472-MONOMER Uniprot:Q3Z983
Length = 693
Score = 243 (90.6 bits), Expect = 3.3e-25, Sum P(3) = 3.3e-25
Identities = 57/131 (43%), Positives = 77/131 (58%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
IIAH+D GKTT + +L + K NI+ +MD E EK RGITI S S +NG
Sbjct: 16 IIAHIDAGKTTTTERILYLTKRTHKIGNIDDGTTVMDWMEQEKARGITITSVATSAYWNG 75
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
+N+IDTPGH DF EVER L ++D +++ D V G Q+ V R+A + G I +
Sbjct: 76 HHLNVIDTPGHVDFTVEVERSLRVLDGGVVVFDGVAGVEAQSETVWRQASRYGVPRICFI 135
Query: 1045 NKIDRSNARPE 1055
NK+DR+ A E
Sbjct: 136 NKMDRTGANYE 146
Score = 125 (49.1 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 37/113 (32%), Positives = 56/113 (49%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G++D G T+++D++ + +A GIT A + N + +DTPGH FT
Sbjct: 41 IGNIDDG-TTVMDWMEQ-----EKARGITITSVATSAYWNGHHLNVIDTPGHVDFTVEVE 94
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDR 187
R +V D V+V GV Q+ A GVP I INK+D+ N +R
Sbjct: 95 RSLRVLDGGVVVFDGVAGVEAQSETVWRQASRYGVPRICFINKMDRTGANYER 147
Score = 115 (45.5 bits), Expect = 3.3e-25, Sum P(3) = 3.3e-25
Identities = 50/203 (24%), Positives = 87/203 (42%)
Query: 1112 PVHKDNSNN-PLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKIN 1170
P+ + S+ P + ++G++ RI SG + + V N + + +I
Sbjct: 298 PMERHASDTEPFSALAFKIVSDPFVGRLVYFRIYSGNVSAGSGVY--NST--RGERERIG 353
Query: 1171 QIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFM 1230
++ DR + A +G+IV G+ G T+CD S P L + EP IN
Sbjct: 354 RLIRMHANDREEIEYADAGEIVASLGLRNTFTGDTLCDQSAPILLESIKFPEPV--INLA 411
Query: 1231 VNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVT-QNKHDDSIYE--VSGRGELHLTI 1287
+ E K TR ++++ ++ T + K DD + + G GELHL +
Sbjct: 412 I--------EPK---TRSDQDKMTEGLQKLAEEDPTFKVKFDDETGQTVIYGMGELHLDV 460
Query: 1288 LIENMRRE-GYELSVSRPRVIFK 1309
L+ + E SV +PRV ++
Sbjct: 461 LVSRLLSEFKVNASVGKPRVAYR 483
Score = 68 (29.0 bits), Expect = 3.3e-25, Sum P(3) = 3.3e-25
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
L EP L E G ++ N R G + ++E N + V + +P G+ +
Sbjct: 600 LLEPIMKLEAVTPEEYMGDVIGDFNSRRGQIISVEPNPETTV-ITGNVPLAESFGYTTDL 658
Query: 1375 ITLTRGTGLISHVFEEY 1391
++T+G S FE Y
Sbjct: 659 RSVTKGRATFSMEFESY 675
Score = 42 (19.8 bits), Expect = 0.00092, Sum P(4) = 0.00092
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 66 LVRAPIVTIMGHVDHGKTSLLDYI 89
L R + I+ H+D GKT+ + I
Sbjct: 8 LERVRNIGIIAHIDAGKTTTTERI 31
Score = 38 (18.4 bits), Expect = 0.00092, Sum P(4) = 0.00092
Identities = 19/89 (21%), Positives = 35/89 (39%)
Query: 681 KKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSEADKYYEAIIHLGITTETG 740
++I YL K+ G +D T ++ E + S A Y HL + G
Sbjct: 29 ERILYL--TKRTHKIGNIDD-GTTVMDWMEQEKARGITITSVATSAYWNGHHLNVIDTPG 85
Query: 741 DIEGKIIDFNKNIPNSIEIIEKILINFHG 769
+ DF + S+ +++ ++ F G
Sbjct: 86 HV-----DFTVEVERSLRVLDGGVVVFDG 109
>TIGR_CMR|GSU_2860 [details] [associations]
symbol:GSU_2860 "translation elongation factor G"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 KO:K02355 HAMAP:MF_00054_B
TIGRFAMs:TIGR00484 OMA:QEPGKGY ProtClustDB:PRK00007
RefSeq:NP_953903.1 ProteinModelPortal:Q748Y8 SMR:Q748Y8
GeneID:2688704 KEGG:gsu:GSU2860 PATRIC:22028567
HOGENOM:HOG000231587 BioCyc:GSUL243231:GH27-2841-MONOMER
Uniprot:Q748Y8
Length = 692
Score = 224 (83.9 bits), Expect = 5.4e-25, Sum P(3) = 5.4e-25
Identities = 54/128 (42%), Positives = 74/128 (57%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L +G K ++ A MD E E+ERGITI S + +
Sbjct: 15 IMAHIDAGKTTTTERILYYTGVTHKIGEVHEGAATMDWMEQEQERGITITSAATTCFWGD 74
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R+NIIDTPGH DF EVER L ++D + + +V G PQ+ V R+A K I +
Sbjct: 75 HRVNIIDTPGHVDFTIEVERSLRVLDGAVAVFCSVGGVEPQSETVWRQADKYRVPRIAFI 134
Query: 1045 NKIDRSNA 1052
NK+DR A
Sbjct: 135 NKMDRVGA 142
Score = 138 (53.6 bits), Expect = 5.4e-25, Sum P(3) = 5.4e-25
Identities = 46/196 (23%), Positives = 88/196 (44%)
Query: 1115 KDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRV 1174
K + + P + ++G++ R+ SG + S + N +K K +I ++
Sbjct: 302 KASDDEPFSALAFKIMTDPFVGQLCFFRVYSGVLNS--GSYVYNSTKEK--KERIGRLLK 357
Query: 1175 FKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNS 1234
R + E +GDI G++ G T+C P L + EP + I +
Sbjct: 358 MHANKREEIKEVYAGDIAAAVGLKYTTTGDTLCPEDSPVVLESIEFPEPVIAI--AIEPK 415
Query: 1235 PLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRR 1294
A +E I+ +++ + D + +R T + +I +SG GELHL I+++ + R
Sbjct: 416 TKADQEKLGISLQKLASE-DPSFR----VR-TDEETGQTI--ISGMGELHLEIIVDRLMR 467
Query: 1295 E-GYELSVSRPRVIFK 1309
E E +V +P+V ++
Sbjct: 468 EFKVEANVGKPQVAYR 483
Score = 107 (42.7 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 38/130 (29%), Positives = 56/130 (43%)
Query: 59 KNITAESLVRAPIVTI-MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
K T E ++ VT +G V G ++ D++ + + GIT A
Sbjct: 23 KTTTTERILYYTGVTHKIGEVHEGAATM-DWMEQ-----EQERGITITSAATTCFWGDHR 76
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH FT R +V D V V + GV PQ+ A VP I INK
Sbjct: 77 VNIIDTPGHVDFTIEVERSLRVLDGAVAVFCSVGGVEPQSETVWRQADKYRVPRIAFINK 136
Query: 178 IDKLDINLDR 187
+D++ + R
Sbjct: 137 MDRVGADFFR 146
Score = 63 (27.2 bits), Expect = 5.4e-25, Sum P(3) = 5.4e-25
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
L EP ++ V + E G ++ LN R G + +E +V + +P + G+ +
Sbjct: 600 LLEPIMSVEVVVPEEYMGDVIGDLNSRRGRIMGMEGRAGAQV-VSAMVPLAQMFGYATDL 658
Query: 1375 ITLTRGTGLISHVFEEY 1391
+ T+G + F+ Y
Sbjct: 659 RSATQGRATYTMTFDHY 675
Score = 50 (22.7 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 65 SLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA 108
SL + + IM H+D GKT+ + I V + G + H GA
Sbjct: 6 SLEKTRNIGIMAHIDAGKTTTTERILYYTGVTHKIGEV--HEGA 47
Score = 43 (20.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 22/99 (22%), Positives = 45/99 (45%)
Query: 1317 EPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFIT 1376
E + + + E++ II+ +L R + K +E N + ++ YR + + +F+
Sbjct: 444 ETGQTIISGMGELHLEIIVDRL-MR--EFK-VEANVG-KPQVAYRETVTKKVKVEGKFVR 498
Query: 1377 LTRGTGLISHVFEEYAPFYNKSKYD-LGKRRNGVLISQY 1414
+ G G HV+ E P Y+ + + GV+ +Y
Sbjct: 499 QSGGRGQYGHVWIELEPQEAGKGYEFVDAIKGGVVPREY 537
>UNIPROTKB|Q9KPM5 [details] [associations]
symbol:fusA2 "Elongation factor G 2" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006184
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 KO:K02355 OMA:WRYANDS
ProtClustDB:PRK12740 HAMAP:MF_00054_B TIGRFAMs:TIGR00484 PIR:G82088
RefSeq:NP_231972.1 ProteinModelPortal:Q9KPM5 DNASU:2613138
GeneID:2613138 KEGG:vch:VC2342 PATRIC:20083709 Uniprot:Q9KPM5
Length = 695
Score = 203 (76.5 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 53/141 (37%), Positives = 76/141 (53%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGI 971
++D ++Y I I AHVD GKTT + +L+ +G + ++ A MD E E ERGI
Sbjct: 1 MADLSLYRNI--GIFAHVDAGKTTTTERILKLTGKIHRLGEVHDGASTMDFMEQEAERGI 58
Query: 972 TIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
TI S + + G R N+IDTPGH DF EV R L ++D + + G PQ+ R
Sbjct: 59 TIQSAATTCFWKGHRFNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWR 118
Query: 1032 KALKLGFKPIVVVNKIDRSNA 1052
A + ++ VNK+DR A
Sbjct: 119 YANESEVSRLIFVNKLDRMGA 139
Score = 134 (52.2 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 53/187 (28%), Positives = 84/187 (44%)
Query: 1136 GKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLIT 1195
G + RI SG+IK D I+N K + I ++ DR V A + DI+ I
Sbjct: 321 GALTFVRIYSGKIKK-GDT-ILNSATGKTER--IGRMVEMHANDRNEVESAQASDIIAIV 376
Query: 1196 GIEEICIGSTICDPSKPNGL-PMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLD 1254
G++ + G T+CDP L PM+ PT I+ V G E I ++
Sbjct: 377 GMKNVQTGHTLCDPKHECTLEPMIF---PTPVISIAVKPKDKNGSEKMGIAIGKM----- 428
Query: 1255 HEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK-TLN 1312
+ + +V + D + G GELHL I ++ ++R G EL V P+V ++ T+
Sbjct: 429 --VAEDPSFQV-ETDEDSGETILKGMGELHLDIKVDILKRTYGVELEVGAPQVAYRETIT 485
Query: 1313 GELYEPY 1319
+ + Y
Sbjct: 486 KAVEDSY 492
Score = 109 (43.4 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 40/152 (26%), Positives = 69/152 (45%)
Query: 59 KNITAESLVRAP-IVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
K T E +++ + +G V H S +D++ + +E G IT A
Sbjct: 20 KTTTTERILKLTGKIHRLGEV-HDGASTMDFMEQE----AERG-ITIQSAATTCFWKGHR 73
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+DTPGH FT R KV D + V GV PQ+ +A S V ++ +NK
Sbjct: 74 FNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANESEVSRLIFVNK 133
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFI 209
+D++ + R+ + + ++V+ GA+P +
Sbjct: 134 LDRMGADFFRVVEQV--KKVL-----GANPLV 158
Score = 89 (36.4 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 1314 ELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNE 1373
+L EP + V E + G ++ LN R G +K+ E+ VR++ +P + G+
Sbjct: 597 QLLEPIMKVDVFTPEDHVGDVIGDLNRRRGMIKDQEMG-LTGVRVKADVPLSEMFGYIGS 655
Query: 1374 FITLTRGTGLISHVFEEYAPFYN 1396
T+T G G S F YAP N
Sbjct: 656 LRTMTSGRGQFSMEFSHYAPCPN 678
Score = 46 (21.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA 108
+ I HVD GKT+ + I K G + H GA
Sbjct: 10 IGIFAHVDAGKTTTTERILKLTGKIHRLGEV--HDGA 44
>TIGR_CMR|VC_2342 [details] [associations]
symbol:VC_2342 "elongation factor G" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003746 "translation elongation
factor activity" evidence=ISS] [GO:0006414 "translational
elongation" evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 KO:K02355 OMA:WRYANDS ProtClustDB:PRK12740
HAMAP:MF_00054_B TIGRFAMs:TIGR00484 PIR:G82088 RefSeq:NP_231972.1
ProteinModelPortal:Q9KPM5 DNASU:2613138 GeneID:2613138
KEGG:vch:VC2342 PATRIC:20083709 Uniprot:Q9KPM5
Length = 695
Score = 203 (76.5 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 53/141 (37%), Positives = 76/141 (53%)
Query: 914 LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGI 971
++D ++Y I I AHVD GKTT + +L+ +G + ++ A MD E E ERGI
Sbjct: 1 MADLSLYRNI--GIFAHVDAGKTTTTERILKLTGKIHRLGEVHDGASTMDFMEQEAERGI 58
Query: 972 TIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
TI S + + G R N+IDTPGH DF EV R L ++D + + G PQ+ R
Sbjct: 59 TIQSAATTCFWKGHRFNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWR 118
Query: 1032 KALKLGFKPIVVVNKIDRSNA 1052
A + ++ VNK+DR A
Sbjct: 119 YANESEVSRLIFVNKLDRMGA 139
Score = 134 (52.2 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 53/187 (28%), Positives = 84/187 (44%)
Query: 1136 GKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLIT 1195
G + RI SG+IK D I+N K + I ++ DR V A + DI+ I
Sbjct: 321 GALTFVRIYSGKIKK-GDT-ILNSATGKTER--IGRMVEMHANDRNEVESAQASDIIAIV 376
Query: 1196 GIEEICIGSTICDPSKPNGL-PMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLD 1254
G++ + G T+CDP L PM+ PT I+ V G E I ++
Sbjct: 377 GMKNVQTGHTLCDPKHECTLEPMIF---PTPVISIAVKPKDKNGSEKMGIAIGKM----- 428
Query: 1255 HEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK-TLN 1312
+ + +V + D + G GELHL I ++ ++R G EL V P+V ++ T+
Sbjct: 429 --VAEDPSFQV-ETDEDSGETILKGMGELHLDIKVDILKRTYGVELEVGAPQVAYRETIT 485
Query: 1313 GELYEPY 1319
+ + Y
Sbjct: 486 KAVEDSY 492
Score = 109 (43.4 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 40/152 (26%), Positives = 69/152 (45%)
Query: 59 KNITAESLVRAP-IVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
K T E +++ + +G V H S +D++ + +E G IT A
Sbjct: 20 KTTTTERILKLTGKIHRLGEV-HDGASTMDFMEQE----AERG-ITIQSAATTCFWKGHR 73
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+DTPGH FT R KV D + V GV PQ+ +A S V ++ +NK
Sbjct: 74 FNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANESEVSRLIFVNK 133
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFI 209
+D++ + R+ + + ++V+ GA+P +
Sbjct: 134 LDRMGADFFRVVEQV--KKVL-----GANPLV 158
Score = 89 (36.4 bits), Expect = 5.7e-25, Sum P(3) = 5.7e-25
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 1314 ELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNE 1373
+L EP + V E + G ++ LN R G +K+ E+ VR++ +P + G+
Sbjct: 597 QLLEPIMKVDVFTPEDHVGDVIGDLNRRRGMIKDQEMG-LTGVRVKADVPLSEMFGYIGS 655
Query: 1374 FITLTRGTGLISHVFEEYAPFYN 1396
T+T G G S F YAP N
Sbjct: 656 LRTMTSGRGQFSMEFSHYAPCPN 678
Score = 46 (21.3 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA 108
+ I HVD GKT+ + I K G + H GA
Sbjct: 10 IGIFAHVDAGKTTTTERILKLTGKIHRLGEV--HDGA 44
>UNIPROTKB|Q8EH83 [details] [associations]
symbol:lepA "Elongation factor 4" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:NP_716966.1 ProteinModelPortal:Q8EH83
SMR:Q8EH83 GeneID:1169167 KEGG:son:SO_1346 PATRIC:23522346
Uniprot:Q8EH83
Length = 596
Score = 262 (97.3 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 58/144 (40%), Positives = 90/144 (62%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
+IIAH+DHGK+TL D L++ G ++ ++A+++DS ++E+ERGITI +++ ++EY
Sbjct: 8 SIIAHIDHGKSTLSDRLIQVCGGL-SDREMDAQVLDSMDLERERGITIKAQSVTLEYKAK 66
Query: 983 NGT--RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
NG ++N IDTPGH DF EV R L+ + LL++DA +G QT AL +
Sbjct: 67 NGEIYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALDMNLDV 126
Query: 1041 IVVVNKIDRSNARPEWVVDATFDL 1064
+ ++NKID A PE V D+
Sbjct: 127 VPILNKIDLPQADPERVAAEIEDI 150
Score = 150 (57.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 49/156 (31%), Positives = 77/156 (49%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ F+DTPGH F+ +R + +LVV A GV QT A + ++ +NK
Sbjct: 73 LNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALDMNLDVVPILNK 132
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + +R+ ++ E ++ + A + SAKTGVGI+ +LE I Q I +
Sbjct: 133 IDLPQADPERVAAEI--EDIVGIDAMNA---VRCSAKTGVGIDDVLEVIVEQ--IPPPEG 185
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD 273
P + +II+S D G V+ V I+ G L+ D
Sbjct: 186 NPDAPLQALIIDSWFDSYLGVVSLVRIKHGVLKKGD 221
Score = 109 (43.4 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 73/322 (22%), Positives = 144/322 (44%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ E I++ +P + N + PLQ II + SYLG + + RI G +K +M+ +
Sbjct: 172 VLEVIVEQIPPPEGNPDAPLQALIIDSWFDSYLGVVSLVRIKHGVLKKGDKFKVMSTGQN 231
Query: 1163 KPNKAKINQIRVF--KGLDRVLVNEALSGDI-VLITGIEEICIGSTICDPSKPNGLPMLN 1219
+++ +F K D+ E +G++ +I GI+EI G+ + D L
Sbjct: 232 HT----ADRVGIFTPKQTDKT---ELKTGEVGFVIAGIKEIH-GAPVGDTLT---LAKNG 280
Query: 1220 IDEPTLTINFMVNNSPLAGREGKF-ITTRQIKNRLD--HEIKNNIGLRVTQNKHDDSI-- 1274
D+P V AG F I+T + +N D +++ N + + ++
Sbjct: 281 ADKPLPGFK-KVKPQVYAG---VFPISTDEYENFRDALNKLSLNDASLFFEPESSSALGF 336
Query: 1275 -YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTL--NGE-LY--EPYENLFVD- 1325
+ + G LH+ I+ E + RE Y+L + + P V+++ L +GE +Y P + ++
Sbjct: 337 GFRIGYLGLLHMEIIQERLERE-YDLDLITTAPTVVYEVLMTSGETIYVDNPADLPAINN 395
Query: 1326 IEEINQGIIMQKL----NYRGG------DLKNIEIN---EKERVRLEYRIPSRGLI-GFQ 1371
IEE+ + I+ + Y G + + ++N +V + Y +P ++ F
Sbjct: 396 IEEMREPIVEANILVPKEYLGNVITLCIEKRGTQVNMVYHGNQVAVTYHLPMAEVVMDFF 455
Query: 1372 NEFITLTRGTGLISHVFEEYAP 1393
+ + +RG + + F + P
Sbjct: 456 DRLKSTSRGYASLEYNFIRFDP 477
Score = 42 (19.8 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 58/260 (22%), Positives = 101/260 (38%)
Query: 1275 YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTLNGELYEPYENLFVDIEEINQG 1332
+ + G LH+ I+ E + RE Y+L + + P V+++ L E ++VD N
Sbjct: 338 FRIGYLGLLHMEIIQERLERE-YDLDLITTAPTVVYEVL----MTSGETIYVD----NPA 388
Query: 1333 IIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLT---RGT--GLISHV 1387
+ + NIE + V +P L ITL RGT ++ H
Sbjct: 389 DLPA--------INNIEEMREPIVEANILVPKEYL----GNVITLCIEKRGTQVNMVYHG 436
Query: 1388 FEEYAPFYNKSKYDLGKRRNGVLISQYSGKA-VAYSLWKLQ--DRGRLFINHNDLVYEGM 1444
+ A Y+ ++ L S G A + Y+ + D RL I N + +
Sbjct: 437 -NQVAVTYHLPMAEVVMDFFDRLKSTSRGYASLEYNFIRFDPADMVRLDILINGDRVDAL 495
Query: 1445 IIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITP 1504
+ IH + + EK I D AIQ +I ++ + D +
Sbjct: 496 AMIIHRSNIRHRGLALVEKMKELIPRQMFDIAIQAAVGSQIIARSTVKALRKDVTAKCYG 555
Query: 1505 KNIRLRKRFL-KENERKKKL 1523
++ +K+ L K+ E KK++
Sbjct: 556 GDVSRKKKLLNKQKEGKKRM 575
>TIGR_CMR|SO_1346 [details] [associations]
symbol:SO_1346 "GTP-binding protein LepA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00071
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412 GO:GO:0003924
GO:GO:0006184 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:NP_716966.1 ProteinModelPortal:Q8EH83
SMR:Q8EH83 GeneID:1169167 KEGG:son:SO_1346 PATRIC:23522346
Uniprot:Q8EH83
Length = 596
Score = 262 (97.3 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 58/144 (40%), Positives = 90/144 (62%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
+IIAH+DHGK+TL D L++ G ++ ++A+++DS ++E+ERGITI +++ ++EY
Sbjct: 8 SIIAHIDHGKSTLSDRLIQVCGGL-SDREMDAQVLDSMDLERERGITIKAQSVTLEYKAK 66
Query: 983 NGT--RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
NG ++N IDTPGH DF EV R L+ + LL++DA +G QT AL +
Sbjct: 67 NGEIYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALDMNLDV 126
Query: 1041 IVVVNKIDRSNARPEWVVDATFDL 1064
+ ++NKID A PE V D+
Sbjct: 127 VPILNKIDLPQADPERVAAEIEDI 150
Score = 150 (57.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 49/156 (31%), Positives = 77/156 (49%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ F+DTPGH F+ +R + +LVV A GV QT A + ++ +NK
Sbjct: 73 LNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTALDMNLDVVPILNK 132
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + +R+ ++ E ++ + A + SAKTGVGI+ +LE I Q I +
Sbjct: 133 IDLPQADPERVAAEI--EDIVGIDAMNA---VRCSAKTGVGIDDVLEVIVEQ--IPPPEG 185
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD 273
P + +II+S D G V+ V I+ G L+ D
Sbjct: 186 NPDAPLQALIIDSWFDSYLGVVSLVRIKHGVLKKGD 221
Score = 109 (43.4 bits), Expect = 8.2e-25, Sum P(2) = 8.2e-25
Identities = 73/322 (22%), Positives = 144/322 (44%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ E I++ +P + N + PLQ II + SYLG + + RI G +K +M+ +
Sbjct: 172 VLEVIVEQIPPPEGNPDAPLQALIIDSWFDSYLGVVSLVRIKHGVLKKGDKFKVMSTGQN 231
Query: 1163 KPNKAKINQIRVF--KGLDRVLVNEALSGDI-VLITGIEEICIGSTICDPSKPNGLPMLN 1219
+++ +F K D+ E +G++ +I GI+EI G+ + D L
Sbjct: 232 HT----ADRVGIFTPKQTDKT---ELKTGEVGFVIAGIKEIH-GAPVGDTLT---LAKNG 280
Query: 1220 IDEPTLTINFMVNNSPLAGREGKF-ITTRQIKNRLD--HEIKNNIGLRVTQNKHDDSI-- 1274
D+P V AG F I+T + +N D +++ N + + ++
Sbjct: 281 ADKPLPGFK-KVKPQVYAG---VFPISTDEYENFRDALNKLSLNDASLFFEPESSSALGF 336
Query: 1275 -YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTL--NGE-LY--EPYENLFVD- 1325
+ + G LH+ I+ E + RE Y+L + + P V+++ L +GE +Y P + ++
Sbjct: 337 GFRIGYLGLLHMEIIQERLERE-YDLDLITTAPTVVYEVLMTSGETIYVDNPADLPAINN 395
Query: 1326 IEEINQGIIMQKL----NYRGG------DLKNIEIN---EKERVRLEYRIPSRGLI-GFQ 1371
IEE+ + I+ + Y G + + ++N +V + Y +P ++ F
Sbjct: 396 IEEMREPIVEANILVPKEYLGNVITLCIEKRGTQVNMVYHGNQVAVTYHLPMAEVVMDFF 455
Query: 1372 NEFITLTRGTGLISHVFEEYAP 1393
+ + +RG + + F + P
Sbjct: 456 DRLKSTSRGYASLEYNFIRFDP 477
Score = 42 (19.8 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 58/260 (22%), Positives = 101/260 (38%)
Query: 1275 YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTLNGELYEPYENLFVDIEEINQG 1332
+ + G LH+ I+ E + RE Y+L + + P V+++ L E ++VD N
Sbjct: 338 FRIGYLGLLHMEIIQERLERE-YDLDLITTAPTVVYEVL----MTSGETIYVD----NPA 388
Query: 1333 IIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLT---RGT--GLISHV 1387
+ + NIE + V +P L ITL RGT ++ H
Sbjct: 389 DLPA--------INNIEEMREPIVEANILVPKEYL----GNVITLCIEKRGTQVNMVYHG 436
Query: 1388 FEEYAPFYNKSKYDLGKRRNGVLISQYSGKA-VAYSLWKLQ--DRGRLFINHNDLVYEGM 1444
+ A Y+ ++ L S G A + Y+ + D RL I N + +
Sbjct: 437 -NQVAVTYHLPMAEVVMDFFDRLKSTSRGYASLEYNFIRFDPADMVRLDILINGDRVDAL 495
Query: 1445 IIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITP 1504
+ IH + + EK I D AIQ +I ++ + D +
Sbjct: 496 AMIIHRSNIRHRGLALVEKMKELIPRQMFDIAIQAAVGSQIIARSTVKALRKDVTAKCYG 555
Query: 1505 KNIRLRKRFL-KENERKKKL 1523
++ +K+ L K+ E KK++
Sbjct: 556 GDVSRKKKLLNKQKEGKKRM 575
>TIGR_CMR|SO_0842 [details] [associations]
symbol:SO_0842 "translation elongation factor G"
species:211586 "Shewanella oneidensis MR-1" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
OMA:WRYANDS ProtClustDB:PRK12740 HAMAP:MF_00054_B
TIGRFAMs:TIGR00484 RefSeq:NP_716473.1 ProteinModelPortal:Q8EIJ7
GeneID:1168689 KEGG:son:SO_0842 PATRIC:23521345 Uniprot:Q8EIJ7
Length = 697
Score = 188 (71.2 bits), Expect = 8.9e-25, Sum P(3) = 8.9e-25
Identities = 53/140 (37%), Positives = 70/140 (50%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I AHVD GKTT + +L+ +G K ++ D E ERGITI S S +
Sbjct: 12 IFAHVDAGKTTTTERILKLTGKIHKIGEVHDGESTTDFMVQEAERGITIQSAAVSCFWKD 71
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R N+IDTPGH DF EV R L ++D + + G PQ+ R A + I+ V
Sbjct: 72 HRFNVIDTPGHVDFTVEVYRSLKVLDGGIAVFCGSGGVEPQSETNWRYANESEVARIIFV 131
Query: 1045 NKIDRSNARPEWVVDATFDL 1064
NK+DR A VV T D+
Sbjct: 132 NKLDRMGADFLRVVKQTKDV 151
Score = 153 (58.9 bits), Expect = 8.9e-25, Sum P(3) = 8.9e-25
Identities = 58/213 (27%), Positives = 95/213 (44%)
Query: 1109 KYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAK 1168
+Y V D S L +I+ + G + RI +GR+K D I+N K +
Sbjct: 297 EYAIVSADESLKALAFKIMDDRF----GALTFVRIYAGRLKK-GDT-ILNSATGKTER-- 348
Query: 1169 INQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTIN 1228
I ++ DR+ + A +GDI+ I G++ + G T+CD P L + EP ++I
Sbjct: 349 IGRMCEMYANDRIEIESAEAGDIIAIVGMKNVQTGHTLCDVKHPCTLEAMVFPEPVISI- 407
Query: 1229 FMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTIL 1288
V G E I ++ I + RV + D + G GELHL I
Sbjct: 408 -AVAPKDKGGSEKMAIAIGKM-------IAEDPSFRV-ETDEDSGETILKGMGELHLDIK 458
Query: 1289 IENMRRE-GYELSVSRPRVIFK-TLNGELYEPY 1319
++ ++R G EL V P+V ++ T+ + + Y
Sbjct: 459 VDILKRTYGVELIVGEPQVAYRETITAMVEDQY 491
Score = 113 (44.8 bits), Expect = 6.8e-17, Sum P(3) = 6.8e-17
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 71 IVTIMGHVDHGKTSLLDYIRKTNVVFSEAG-GITQHIGAYNVVTNHGSITFLDTPGHEAF 129
I+ + G + H + D T+ + EA GIT A + +DTPGH F
Sbjct: 27 ILKLTGKI-HKIGEVHDGESTTDFMVQEAERGITIQSAAVSCFWKDHRFNVIDTPGHVDF 85
Query: 130 TAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRI- 188
T R KV D + V GV PQ+ +A S V I+ +NK+D++ + R+
Sbjct: 86 TVEVYRSLKVLDGGIAVFCGSGGVEPQSETNWRYANESEVARIIFVNKLDRMGADFLRVV 145
Query: 189 KQ 190
KQ
Sbjct: 146 KQ 147
Score = 84 (34.6 bits), Expect = 8.9e-25, Sum P(3) = 8.9e-25
Identities = 24/83 (28%), Positives = 40/83 (48%)
Query: 1314 ELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNE 1373
+L EP + V + N G ++ LN R G +K+ ++ VR++ +P + G+
Sbjct: 596 QLLEPIMKVDVFSPDDNVGDVIGDLNRRRGMIKD-QVAGITGVRVKADVPLSEMFGYIGS 654
Query: 1374 FITLTRGTGLISHVFEEYAPFYN 1396
T+T G G S F Y+P N
Sbjct: 655 LRTMTSGRGQFSMEFSHYSPCPN 677
Score = 43 (20.2 bits), Expect = 3.4e-09, Sum P(4) = 3.4e-09
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 72 VTIMGHVDHGKTSLLDYIRK 91
+ I HVD GKT+ + I K
Sbjct: 10 IGIFAHVDAGKTTTTERILK 29
Score = 37 (18.1 bits), Expect = 3.4e-09, Sum P(4) = 3.4e-09
Identities = 5/20 (25%), Positives = 14/20 (70%)
Query: 476 AEIRQVILVNKVSKIAGCYI 495
+E+ ++I VNK+ ++ ++
Sbjct: 123 SEVARIIFVNKLDRMGADFL 142
>UNIPROTKB|Q608M4 [details] [associations]
symbol:lepA "Elongation factor 4" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00071 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006297
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0006412 GO:GO:0003924 GO:GO:0006184
EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0481 HOGENOM:HOG000020624
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596 ProtClustDB:PRK05433
RefSeq:YP_113923.1 ProteinModelPortal:Q608M4 SMR:Q608M4
GeneID:3103401 KEGG:mca:MCA1466 PATRIC:22606768 Uniprot:Q608M4
Length = 601
Score = 240 (89.5 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 51/134 (38%), Positives = 84/134 (62%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+IIAH+DHGK+TL D ++ G ++ + +++DS +IE+ERGITI +++ +++Y
Sbjct: 11 SIIAHIDHGKSTLADRFIQICGGL-SDREMAEQVLDSMDIERERGITIKAQSVTLDYQSR 69
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
++N IDTPGH DF EV R L+ + LL++DA +G Q+ A++ G +
Sbjct: 70 DGGIYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQSVANCYTAIEQGLEV 129
Query: 1041 IVVVNKIDRSNARP 1054
+ V+NKID +A P
Sbjct: 130 LPVLNKIDLPSADP 143
Score = 154 (59.3 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 48/152 (31%), Positives = 76/152 (50%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ F+DTPGH F+ +R + +LVV A GV Q+ A G+ ++ +NK
Sbjct: 76 LNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQSVANCYTAIEQGLEVLPVLNK 135
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + R+K ++ E++I A + ISAKTG G++ LLE L +I K
Sbjct: 136 IDLPSADPARVKSEI--EEIIGIP---AEDAVEISAKTGFGVDLLLEE--LVKKIPPPKG 188
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTL 269
P + +II+S D G V+ V + +G +
Sbjct: 189 DAEGPLQALIIDSWFDNYLGVVSLVRVVNGAI 220
Score = 131 (51.2 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 61/248 (24%), Positives = 115/248 (46%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
L E ++K +P K ++ PLQ II + +YLG + + R+++G I Q + IM+
Sbjct: 175 LLEELVKKIPPPKGDAEGPLQALIIDSWFDNYLGVVSLVRVVNGAISRKQKITIMS--TG 232
Query: 1163 KPNKAKINQIRVF--KGLDRVLVNEALSGDIVLITGIEEIC---IGSTICDPSKPNGLPM 1217
K + + ++ VF K LD+ ++ G +V GI++I +G TI +P P+
Sbjct: 233 KSHL--VEKLGVFTPKPLDKTVLGAGEVGFVV--AGIKDIFGAPVGDTITATDRPTTEPL 288
Query: 1218 LNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSI--- 1274
+ + P+ + + + R+ N+L H N+ L + + ++
Sbjct: 289 PGFQKVQPRV--FAGLYPVESDD--YESLREALNKL-H--LNDAALHF-EPEVSQALGFG 340
Query: 1275 YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTLNGE-LYEPYENLFV-----DI 1326
+ G LH+ I+ E + RE Y+L + + P V+++ + P +N +I
Sbjct: 341 FRCGFLGMLHMEIIQERLERE-YDLDLITTAPTVVYEVAKSDGTVVPVDNPADLPPPNEI 399
Query: 1327 EEINQGII 1334
EEI + II
Sbjct: 400 EEIREPII 407
Score = 53 (23.7 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ H+DHGK++L D
Sbjct: 11 SIIAHIDHGKSTLAD 25
Score = 51 (23.0 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 359 INKEKVKNLLIIIKTDVYGSR-EVLTESLKNLSTDKVKIQVIHNAVGN 405
IN EKV L +I+ D+ +R L E +K+L ++ I A+G+
Sbjct: 490 INGEKVDALSLIVHRDISMNRGRDLVERMKDLIPRQMFEVAIQAAIGS 537
>UNIPROTKB|Q3Z864 [details] [associations]
symbol:lepA "Elongation factor 4" species:243164
"Dehalococcoides ethenogenes 195" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR005225
InterPro:IPR006297 Pfam:PF00009 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0006412 GO:GO:0003924 GO:GO:0006184
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022
SUPFAM:SSF54980 eggNOG:COG0481 HOGENOM:HOG000020624
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596 ProtClustDB:PRK05433
RefSeq:YP_181585.1 ProteinModelPortal:Q3Z864 STRING:Q3Z864
GeneID:3229829 KEGG:det:DET0859 PATRIC:21608777
BioCyc:DETH243164:GJNF-860-MONOMER Uniprot:Q3Z864
Length = 605
Score = 259 (96.2 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 56/131 (42%), Positives = 81/131 (61%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY---- 982
IIAH+DHGK+TL D L+ +GT R ++ ++MDS E+E+ERGITI +K + Y
Sbjct: 11 IIAHIDHGKSTLADRLIEMTGTLRHDEMCE-QVMDSMELERERGITIKAKAIRLRYLSKD 69
Query: 983 -NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ R+N+IDTPGH DF EV R ++ + +L+IDA +G QT A++ + I
Sbjct: 70 SHEYRLNLIDTPGHVDFSYEVSRTIAACEGAILVIDATQGIQAQTLANVYLAIEYNLEII 129
Query: 1042 VVVNKIDRSNA 1052
V+NKID A
Sbjct: 130 PVINKIDLPGA 140
Score = 153 (58.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 53/192 (27%), Positives = 86/192 (44%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R + +LV+ A G+ QT + A + +I INK
Sbjct: 75 LNLIDTPGHVDFSYEVSRTIAACEGAILVIDATQGIQAQTLANVYLAIEYNLEIIPVINK 134
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID ++ R+ ++ S E+ I ISAK G+G+ +LLE ++ A + K
Sbjct: 135 IDLPGADIPRVMGEIKSVLGYDED-----AVIQISAKLGLGVPELLE--AIVARVPAPKG 187
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILE 297
P + +I +S D KG VA + + G + D +R M +LE
Sbjct: 188 DGKLPLRALIFDSHYDPYKGVVAYLRVADGNINKGD---------DLRLMGQGTEFKVLE 238
Query: 298 AGPSIPVEIQGL 309
AG P ++ L
Sbjct: 239 AGYFAPAQVAAL 250
Score = 80 (33.2 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 1095 ARQGNMIP-LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G +P L EAI+ VP K + PL+ I Y Y G + R+ G I D
Sbjct: 165 AKLGLGVPELLEAIVARVPAPKGDGKLPLRALIFDSHYDPYKGVVAYLRVADGNINKGDD 224
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLI-TGIEEI--C-IGSTI 1206
+ +M + + K+ + F +V GD+ + TG++ + C +G T+
Sbjct: 225 LRLMG----QGTEFKVLEAGYFAPA-QVAALRLDVGDVGYVATGLKSVGECRVGDTV 276
Score = 76 (31.8 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 1249 IKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYEL-SVSRPRVI 1307
I RL+ E N+ L VT ++ SG E+ LT++ N +E+ S+ P V
Sbjct: 353 IVERLEREF--NLSLVVTSPGVSLTVTRTSG--EV-LTVVNPNEMPLPHEIASIEEPWVS 407
Query: 1308 FKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGL 1367
+ Y +D+ N G+ + Y G L E+ + RV+L Y +P R +
Sbjct: 408 VVIITPS---KYIGTVMDLVRENYGVY-KNTEYLG-QLAMSELGQ--RVQLHYDMPLRSI 460
Query: 1368 IG-FQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYS 1415
+ F ++ + T+G + + F Y N SK D+ N V + +S
Sbjct: 461 LTTFHDQLKSRTQGYASLDYEFVGYR-IANLSKIDV--LVNDVAVDAFS 506
Score = 49 (22.3 bits), Expect = 8.8e-22, Sum P(3) = 8.8e-22
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 1281 GELHLTILIENMRRE-GYELSVSRPRV 1306
G LHL I++E + RE L V+ P V
Sbjct: 346 GLLHLDIIVERLEREFNLSLVVTSPGV 372
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 760 IEKILINFHGKISQIPPMYSALKYKGIPLYKYA 792
+ IL FH ++ Y++L Y+ + Y+ A
Sbjct: 457 LRSILTTFHDQLKSRTQGYASLDYEFVG-YRIA 488
>TIGR_CMR|DET_0859 [details] [associations]
symbol:DET_0859 "GTP-binding protein LepA" species:243164
"Dehalococcoides ethenogenes 195" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR005225
InterPro:IPR006297 Pfam:PF00009 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0006412 GO:GO:0003924 GO:GO:0006184
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022
SUPFAM:SSF54980 eggNOG:COG0481 HOGENOM:HOG000020624
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596 ProtClustDB:PRK05433
RefSeq:YP_181585.1 ProteinModelPortal:Q3Z864 STRING:Q3Z864
GeneID:3229829 KEGG:det:DET0859 PATRIC:21608777
BioCyc:DETH243164:GJNF-860-MONOMER Uniprot:Q3Z864
Length = 605
Score = 259 (96.2 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 56/131 (42%), Positives = 81/131 (61%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY---- 982
IIAH+DHGK+TL D L+ +GT R ++ ++MDS E+E+ERGITI +K + Y
Sbjct: 11 IIAHIDHGKSTLADRLIEMTGTLRHDEMCE-QVMDSMELERERGITIKAKAIRLRYLSKD 69
Query: 983 -NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ R+N+IDTPGH DF EV R ++ + +L+IDA +G QT A++ + I
Sbjct: 70 SHEYRLNLIDTPGHVDFSYEVSRTIAACEGAILVIDATQGIQAQTLANVYLAIEYNLEII 129
Query: 1042 VVVNKIDRSNA 1052
V+NKID A
Sbjct: 130 PVINKIDLPGA 140
Score = 153 (58.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 53/192 (27%), Positives = 86/192 (44%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R + +LV+ A G+ QT + A + +I INK
Sbjct: 75 LNLIDTPGHVDFSYEVSRTIAACEGAILVIDATQGIQAQTLANVYLAIEYNLEIIPVINK 134
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID ++ R+ ++ S E+ I ISAK G+G+ +LLE ++ A + K
Sbjct: 135 IDLPGADIPRVMGEIKSVLGYDED-----AVIQISAKLGLGVPELLE--AIVARVPAPKG 187
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILE 297
P + +I +S D KG VA + + G + D +R M +LE
Sbjct: 188 DGKLPLRALIFDSHYDPYKGVVAYLRVADGNINKGD---------DLRLMGQGTEFKVLE 238
Query: 298 AGPSIPVEIQGL 309
AG P ++ L
Sbjct: 239 AGYFAPAQVAAL 250
Score = 80 (33.2 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 1095 ARQGNMIP-LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G +P L EAI+ VP K + PL+ I Y Y G + R+ G I D
Sbjct: 165 AKLGLGVPELLEAIVARVPAPKGDGKLPLRALIFDSHYDPYKGVVAYLRVADGNINKGDD 224
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLI-TGIEEI--C-IGSTI 1206
+ +M + + K+ + F +V GD+ + TG++ + C +G T+
Sbjct: 225 LRLMG----QGTEFKVLEAGYFAPA-QVAALRLDVGDVGYVATGLKSVGECRVGDTV 276
Score = 76 (31.8 bits), Expect = 1.5e-24, Sum P(3) = 1.5e-24
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 1249 IKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYEL-SVSRPRVI 1307
I RL+ E N+ L VT ++ SG E+ LT++ N +E+ S+ P V
Sbjct: 353 IVERLEREF--NLSLVVTSPGVSLTVTRTSG--EV-LTVVNPNEMPLPHEIASIEEPWVS 407
Query: 1308 FKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGL 1367
+ Y +D+ N G+ + Y G L E+ + RV+L Y +P R +
Sbjct: 408 VVIITPS---KYIGTVMDLVRENYGVY-KNTEYLG-QLAMSELGQ--RVQLHYDMPLRSI 460
Query: 1368 IG-FQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYS 1415
+ F ++ + T+G + + F Y N SK D+ N V + +S
Sbjct: 461 LTTFHDQLKSRTQGYASLDYEFVGYR-IANLSKIDV--LVNDVAVDAFS 506
Score = 49 (22.3 bits), Expect = 8.8e-22, Sum P(3) = 8.8e-22
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 1281 GELHLTILIENMRRE-GYELSVSRPRV 1306
G LHL I++E + RE L V+ P V
Sbjct: 346 GLLHLDIIVERLEREFNLSLVVTSPGV 372
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 760 IEKILINFHGKISQIPPMYSALKYKGIPLYKYA 792
+ IL FH ++ Y++L Y+ + Y+ A
Sbjct: 457 LRSILTTFHDQLKSRTQGYASLDYEFVG-YRIA 488
>TAIR|locus:2159572 [details] [associations]
symbol:AT5G08650 "AT5G08650" species:3702 "Arabidopsis
thaliana" [GO:0003746 "translation elongation factor activity"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA] [GO:0006364
"rRNA processing" evidence=RCA] [GO:0009637 "response to blue
light" evidence=RCA] [GO:0009902 "chloroplast relocation"
evidence=RCA] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0015979
"photosynthesis" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0034660 "ncRNA metabolic process" evidence=RCA]
HAMAP:MF_03138 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006412 GO:GO:0003924
GO:GO:0006184 Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
EMBL:AB006697 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HSSP:P32324 eggNOG:COG0481 HOGENOM:HOG000020624 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393
EMBL:AY092958 EMBL:AY128719 IPI:IPI00529501 RefSeq:NP_196482.2
UniGene:At.43790 ProteinModelPortal:Q9FNM5 SMR:Q9FNM5 IntAct:Q9FNM5
STRING:Q9FNM5 PaxDb:Q9FNM5 PRIDE:Q9FNM5 EnsemblPlants:AT5G08650.1
GeneID:830766 KEGG:ath:AT5G08650 GeneFarm:2303 TAIR:At5g08650
InParanoid:Q8RWP3 KO:K03596 OMA:KVPISNI PhylomeDB:Q9FNM5
Genevestigator:Q9FNM5 Uniprot:Q9FNM5
Length = 681
Score = 251 (93.4 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 58/137 (42%), Positives = 86/137 (62%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--N 983
+IIAH+DHGK+TL D LL+ +GT + N+++ + +D+ ++E+ERGITI + + Y
Sbjct: 90 SIIAHIDHGKSTLADKLLQVTGTVQ-NRDMKEQFLDNMDLERERGITIKLQAARMRYVYE 148
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
T +N+IDTPGH DF EV R L+ + LL++DA +G QT AL+ + I
Sbjct: 149 DTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEII 208
Query: 1042 VVVNKIDRSNARPEWVV 1058
V+NKID A PE V+
Sbjct: 209 PVLNKIDLPGAEPEKVL 225
Score = 140 (54.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 46/166 (27%), Positives = 81/166 (48%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R + +LVV A GV QT + A + + +I +NK
Sbjct: 154 LNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNK 213
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID +++ +++ E+VI + S I SAK G+GI ++L+ I + + A
Sbjct: 214 IDLPGAEPEKVLREI--EEVIGLD---CSKAIFCSAKEGIGITEILDAI-----VQRIPA 263
Query: 238 PVTT---PAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGAS 280
P+ T P + +I +S D +G + + G ++ D + AS
Sbjct: 264 PLDTAGKPLRALIFDSYYDPYRGVIVYFRVIDGKVKKGDRIFFMAS 309
Score = 120 (47.3 bits), Expect = 1.7e-24, Sum P(2) = 1.7e-24
Identities = 71/318 (22%), Positives = 137/318 (43%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A++G + + +AI++ +P D + PL+ I Y Y G I R++ G++K
Sbjct: 244 AKEGIGITEILDAIVQRIPAPLDTAGKPLRALIFDSYYDPYRGVIVYFRVIDGKVKKGDR 303
Query: 1154 VVIM-NGPD---DKPNKAKINQIRVFKGLDRVLVNEALSGDIVL-ITGIEEICIGSTICD 1208
+ M +G D D+ NQI+V D + E G I + + + +G TI
Sbjct: 304 IFFMASGKDYFADEVGVLSPNQIQV----DELYAGEV--GYIAASVRSVADARVGDTITH 357
Query: 1209 PSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQN 1268
S+ + +E T + P+ + F R +L N+ L+ +
Sbjct: 358 YSRKAESSLPGYEEATPMV--FCGLFPVDADQ--FPDLRDALEKLQ---LNDAALKF-EP 409
Query: 1269 KHDDSI---YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFK--TLNGE------- 1314
+ ++ + G LH+ I+ E + RE Y L++ + P V+++ ++NG+
Sbjct: 410 ETSSAMGFGFRCGFLGLLHMEIVQERLERE-YNLNLITTAPSVVYRVNSVNGDTTLCSNP 468
Query: 1315 --LYEP-----YENLFVDIEEINQ----GIIMQKLNYRGGDLKNIEINEKERVRLEYRIP 1363
L +P E +V IE + G +M+ R G+ K ++ + R + Y +P
Sbjct: 469 SRLPDPGQRKSVEEPYVKIELLTPKDYIGALMELAQERRGEFKEMKYIAENRASILYELP 528
Query: 1364 SRGLIG-FQNEFITLTRG 1380
++G F ++ + T+G
Sbjct: 529 LAEMVGDFFDQLKSRTKG 546
Score = 54 (24.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 64 ESLVRAPI-----VTIMGHVDHGKTSLLD 87
+ L++ PI +I+ H+DHGK++L D
Sbjct: 76 DRLLKVPISNIRNFSIIAHIDHGKSTLAD 104
>TIGR_CMR|NSE_0101 [details] [associations]
symbol:NSE_0101 "tRNA pseudouridine synthase B"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0006400
"tRNA modification" evidence=ISS] [GO:0009982 "pseudouridine
synthase activity" evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR020103 Pfam:PF01509 GO:GO:0003723
EMBL:CP000237 GenomeReviews:CP000237_GR eggNOG:COG0130
GO:GO:0009982 SUPFAM:SSF55120 GO:GO:0031119 KO:K03177
PANTHER:PTHR13767 TIGRFAMs:TIGR00431 OMA:KKSFRNE
HOGENOM:HOG000231223 RefSeq:YP_506001.1 ProteinModelPortal:Q2GEU5
STRING:Q2GEU5 GeneID:3931563 KEGG:nse:NSE_0101 PATRIC:22680305
ProtClustDB:CLSK2528072 BioCyc:NSEN222891:GHFU-137-MONOMER
Uniprot:Q2GEU5
Length = 235
Score = 293 (108.2 bits), Expect = 2.1e-24, P = 2.1e-24
Identities = 74/202 (36%), Positives = 101/202 (50%)
Query: 662 IHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLS 721
I G L LDK G+SS ALK +K KK GY GTLDP ATG+L + G TK
Sbjct: 10 IEGWLSLDKESGISSFGALKLLKRKFGVKKAGYVGTLDPIATGVLVIALGRTTKLIPQFD 69
Query: 722 EADKYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSAL 781
++ K YE I G T+T D EG ++ IP++ I+ +L +F G+ Q+PP +SA+
Sbjct: 70 DSFKEYEFAIEWGAETDTLDSEGAVLRNGGLIPSTSAILG-VLPSFLGEQLQVPPKFSAI 128
Query: 782 KYKGIPLYKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVLSEDIGK 841
G Y AR+G TL++ CSKGTY+R L+ DI +
Sbjct: 129 HVNGHRAYSLARAGIEFNMQPRRVVIHSIECMNHSAGQSTLKVSCSKGTYVRALARDIAR 188
Query: 842 MLGCGAHLKYLRRI--GIDKLT 861
L A + +RR GI +T
Sbjct: 189 KLESLAFVSKIRRTRSGIFNVT 210
>TIGR_CMR|CBU_0235 [details] [associations]
symbol:CBU_0235 "translation elongation factor G"
species:227377 "Coxiella burnetii RSA 493" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0006414 "translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
HOGENOM:HOG000231585 KO:K02355 HAMAP:MF_00054_B TIGRFAMs:TIGR00484
ProtClustDB:PRK00007 RefSeq:NP_819279.1 ProteinModelPortal:Q83ES7
SMR:Q83ES7 PRIDE:Q83ES7 GeneID:1208116 KEGG:cbu:CBU_0235
PATRIC:17929163 OMA:RKATINM BioCyc:CBUR227377:GJ7S-241-MONOMER
Uniprot:Q83ES7
Length = 699
Score = 215 (80.7 bits), Expect = 2.2e-24, Sum P(4) = 2.2e-24
Identities = 61/162 (37%), Positives = 88/162 (54%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSK--NC---- 978
I+AH+D GKTT + +L +G K ++ + +MD E E+ERGITI S C
Sbjct: 17 IMAHIDAGKTTTTERVLYYTGVSHKMGEVHEGSAVMDWMEQEQERGITITSAATTCYWLG 76
Query: 979 -SIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLG 1037
+Y RINIIDTPGH DF EVER L ++D + + +V G PQ+ V R+A +
Sbjct: 77 MDQQYPKHRINIIDTPGHVDFTIEVERSLRVLDGAVAVFCSVGGVEPQSETVWRQANRYH 136
Query: 1038 FKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
+ VNK+DR+ A VV+ + D+L A + P+
Sbjct: 137 VPRLGFVNKMDRAGANFLRVVN---QVKDRLNANPIPIQLPI 175
Score = 144 (55.7 bits), Expect = 2.2e-24, Sum P(4) = 2.2e-24
Identities = 50/195 (25%), Positives = 86/195 (44%)
Query: 1117 NSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFK 1176
+ + P + ++G + R+ SG +KS V P K K +I ++
Sbjct: 312 SDDEPFAALAFKIASDPFVGTLTFFRVYSGILKSGDSVY---NPI-KGKKERIGRLLQMH 367
Query: 1177 GLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPL 1236
R + E +GDI G++ + G TIC+ L ++ EP +++ +
Sbjct: 368 SNSREEIKEVRAGDIAAAVGLKTVTTGDTICNQQNIITLEKMDFPEPVISV--AIEPKTK 425
Query: 1237 AGREGKFITTRQIKNRLDHEIKNNIGLRV-TQNKHDDSIYEVSGRGELHLTILIENMRRE 1295
A +E + +L E + RV T + +I E G GELHL I+++ MRRE
Sbjct: 426 ADQEKMGVAL----GKLAQE---DPSFRVHTDEESAQTIIE--GMGELHLEIIVDRMRRE 476
Query: 1296 -GYELSVSRPRVIFK 1309
E +V +PRV ++
Sbjct: 477 FNVEANVGKPRVAYR 491
Score = 114 (45.2 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 36/131 (27%), Positives = 59/131 (45%)
Query: 75 MGHVDHGKTSLLDYI---RKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTA 131
MG V G ++++D++ ++ + + A +G H I +DTPGH FT
Sbjct: 42 MGEVHEG-SAVMDWMEQEQERGITITSAATTCYWLGMDQQYPKH-RINIIDTPGHVDFTI 99
Query: 132 MRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIK-- 189
R +V D V V + GV PQ+ A VP + +NK+D+ N R+
Sbjct: 100 EVERSLRVLDGAVAVFCSVGGVEPQSETVWRQANRYHVPRLGFVNKMDRAGANFLRVVNQ 159
Query: 190 -QDLISEQVIP 199
+D ++ IP
Sbjct: 160 VKDRLNANPIP 170
Score = 61 (26.5 bits), Expect = 2.2e-24, Sum P(4) = 2.2e-24
Identities = 17/78 (21%), Positives = 38/78 (48%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
L EP + V E G ++ LN R G ++ ++ + ++ ++ +P + G+ +
Sbjct: 608 LLEPIMKVEVVTPEEYMGDVVGDLNRRRGMIQGMDESPAGKI-VDVEVPLAEMFGYATDL 666
Query: 1375 ITLTRGTGLISHVFEEYA 1392
+L++G + F +YA
Sbjct: 667 RSLSQGRATYTMEFLKYA 684
Score = 44 (20.5 bits), Expect = 2.2e-24, Sum P(4) = 2.2e-24
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 66 LVRAPIVTIMGHVDHGKTSLLDYI 89
L R + IM H+D GKT+ + +
Sbjct: 9 LNRTRNIGIMAHIDAGKTTTTERV 32
Score = 43 (20.2 bits), Expect = 1.5e-22, Sum P(4) = 1.5e-22
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 1347 NIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
N+E N + R+ YR R + Q ++I T G G V+ P
Sbjct: 478 NVEANVG-KPRVAYRETIRRSVEQQGKYIRQTGGRGQYGDVWLRIEP 523
>UNIPROTKB|Q47WP3 [details] [associations]
symbol:lepA "Elongation factor 4" species:167879 "Colwellia
psychrerythraea 34H" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:YP_270779.1 ProteinModelPortal:Q47WP3
SMR:Q47WP3 STRING:Q47WP3 GeneID:3522307 KEGG:cps:CPS_4124
PATRIC:21471111 BioCyc:CPSY167879:GI48-4137-MONOMER Uniprot:Q47WP3
Length = 596
Score = 258 (95.9 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 55/139 (39%), Positives = 88/139 (63%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+IIAH+DHGK+TL D L++ G + + + A+++DS +IE+ERGITI +++ +++Y
Sbjct: 8 SIIAHIDHGKSTLSDRLIQHCGGLQARE-MEAQVLDSMDIERERGITIKAQSVTLDYKAK 66
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
++N IDTPGH DF EV R L+ + LL++DA +G QT AL++ +
Sbjct: 67 DGEIYQLNFIDTPGHVDFSYEVSRSLASCEGALLVVDAGQGVEAQTVANCYTALEMDLEV 126
Query: 1041 IVVVNKIDRSNARPEWVVD 1059
+ ++NKID A PE V +
Sbjct: 127 LPILNKIDLPQADPERVCE 145
Score = 152 (58.6 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 47/170 (27%), Positives = 86/170 (50%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ F+DTPGH F+ +R + +LVV A GV QT A + ++ +NK
Sbjct: 73 LNFIDTPGHVDFSYEVSRSLASCEGALLVVDAGQGVEAQTVANCYTALEMDLEVLPILNK 132
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + +R+ +++ E +I + A+ ++ SAKTG+GI +LE I I
Sbjct: 133 IDLPQADPERVCEEI--EHIIGID---ATDAVTCSAKTGIGIEDVLETIV--KNIPSPAG 185
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSM 287
+ P + +I++S D +G V+ V + +G ++ D ++ S G++ +
Sbjct: 186 QIDAPLQALIVDSWFDNYQGVVSLVRVINGEVKKGDKMLV-MSTGQVHQI 234
Score = 109 (43.4 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 57/255 (22%), Positives = 119/255 (46%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ E I+K +P + PLQ I+ + +Y G + + R+++G +K +++M+
Sbjct: 172 VLETIVKNIPSPAGQIDAPLQALIVDSWFDNYQGVVSLVRVINGEVKKGDKMLVMS---- 227
Query: 1163 KPNKAKINQIRVF--KGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDPSKP--NG 1214
+I+++ +F K D ++ +G++ +I GI+EI +G TI K N
Sbjct: 228 TGQVHQIDKVGIFTPKQTDTGVLR---AGEVGFIIAGIKEIHGAPVGDTITISKKETANA 284
Query: 1215 LPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSI 1274
LP +P + P++ + + R N+L N+ L + ++ ++
Sbjct: 285 LPGFKKAQPQVYAGIF----PISSDD--YENFRDALNKLS---LNDASL-FFEPENSSAL 334
Query: 1275 ---YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFK--TLNGELYE---PYENLFV 1324
+ + G LH+ I+ E + RE Y+L + + P V ++ + NG++ P + +
Sbjct: 335 GFGFRIGFLGMLHMEIIQERLARE-YDLDLITTAPTVNYEIASTNGDVISIDNPADLPAI 393
Query: 1325 D-IEEINQGIIMQKL 1338
+ IEEI + I+ +
Sbjct: 394 NNIEEIREPIVQANI 408
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ H+DHGK++L D
Sbjct: 8 SIIAHIDHGKSTLSD 22
Score = 42 (19.8 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 1153 DVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLI 1194
DV+ ++ P D P I +IR +LV + G+++ +
Sbjct: 380 DVISIDNPADLPAINNIEEIREPIVQANILVPQEYLGNVITL 421
>TIGR_CMR|CPS_4124 [details] [associations]
symbol:CPS_4124 "GTP-binding protein LepA" species:167879
"Colwellia psychrerythraea 34H" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:YP_270779.1 ProteinModelPortal:Q47WP3
SMR:Q47WP3 STRING:Q47WP3 GeneID:3522307 KEGG:cps:CPS_4124
PATRIC:21471111 BioCyc:CPSY167879:GI48-4137-MONOMER Uniprot:Q47WP3
Length = 596
Score = 258 (95.9 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 55/139 (39%), Positives = 88/139 (63%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+IIAH+DHGK+TL D L++ G + + + A+++DS +IE+ERGITI +++ +++Y
Sbjct: 8 SIIAHIDHGKSTLSDRLIQHCGGLQARE-MEAQVLDSMDIERERGITIKAQSVTLDYKAK 66
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
++N IDTPGH DF EV R L+ + LL++DA +G QT AL++ +
Sbjct: 67 DGEIYQLNFIDTPGHVDFSYEVSRSLASCEGALLVVDAGQGVEAQTVANCYTALEMDLEV 126
Query: 1041 IVVVNKIDRSNARPEWVVD 1059
+ ++NKID A PE V +
Sbjct: 127 LPILNKIDLPQADPERVCE 145
Score = 152 (58.6 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 47/170 (27%), Positives = 86/170 (50%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ F+DTPGH F+ +R + +LVV A GV QT A + ++ +NK
Sbjct: 73 LNFIDTPGHVDFSYEVSRSLASCEGALLVVDAGQGVEAQTVANCYTALEMDLEVLPILNK 132
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + +R+ +++ E +I + A+ ++ SAKTG+GI +LE I I
Sbjct: 133 IDLPQADPERVCEEI--EHIIGID---ATDAVTCSAKTGIGIEDVLETIV--KNIPSPAG 185
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSM 287
+ P + +I++S D +G V+ V + +G ++ D ++ S G++ +
Sbjct: 186 QIDAPLQALIVDSWFDNYQGVVSLVRVINGEVKKGDKMLV-MSTGQVHQI 234
Score = 109 (43.4 bits), Expect = 2.3e-24, Sum P(2) = 2.3e-24
Identities = 57/255 (22%), Positives = 119/255 (46%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ E I+K +P + PLQ I+ + +Y G + + R+++G +K +++M+
Sbjct: 172 VLETIVKNIPSPAGQIDAPLQALIVDSWFDNYQGVVSLVRVINGEVKKGDKMLVMS---- 227
Query: 1163 KPNKAKINQIRVF--KGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDPSKP--NG 1214
+I+++ +F K D ++ +G++ +I GI+EI +G TI K N
Sbjct: 228 TGQVHQIDKVGIFTPKQTDTGVLR---AGEVGFIIAGIKEIHGAPVGDTITISKKETANA 284
Query: 1215 LPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSI 1274
LP +P + P++ + + R N+L N+ L + ++ ++
Sbjct: 285 LPGFKKAQPQVYAGIF----PISSDD--YENFRDALNKLS---LNDASL-FFEPENSSAL 334
Query: 1275 ---YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFK--TLNGELYE---PYENLFV 1324
+ + G LH+ I+ E + RE Y+L + + P V ++ + NG++ P + +
Sbjct: 335 GFGFRIGFLGMLHMEIIQERLARE-YDLDLITTAPTVNYEIASTNGDVISIDNPADLPAI 393
Query: 1325 D-IEEINQGIIMQKL 1338
+ IEEI + I+ +
Sbjct: 394 NNIEEIREPIVQANI 408
Score = 52 (23.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ H+DHGK++L D
Sbjct: 8 SIIAHIDHGKSTLSD 22
Score = 42 (19.8 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 1153 DVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLI 1194
DV+ ++ P D P I +IR +LV + G+++ +
Sbjct: 380 DVISIDNPADLPAINNIEEIREPIVQANILVPQEYLGNVITL 421
>TIGR_CMR|SO_0228 [details] [associations]
symbol:SO_0228 "translation elongation factor G"
species:211586 "Shewanella oneidensis MR-1" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
HAMAP:MF_00054_B TIGRFAMs:TIGR00484 RefSeq:NP_715868.1
ProteinModelPortal:Q8EK71 SMR:Q8EK71 PRIDE:Q8EK71 GeneID:1168111
KEGG:son:SO_0228 PATRIC:23520149 OMA:QEPGKGY ProtClustDB:PRK00007
Uniprot:Q8EK71
Length = 698
Score = 208 (78.3 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 58/141 (41%), Positives = 76/141 (53%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITI-------FSKN 977
I AHVD GKTT + +L +G K ++ A D E+ERGITI F +
Sbjct: 15 ICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGAATTDWMVQEQERGITITSAAVTTFWRG 74
Query: 978 CSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLG 1037
++ RINIIDTPGH DF EVER L ++D +++ G PQ+ V R+A K
Sbjct: 75 MDAQFTEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGASGVEPQSETVWRQADKYR 134
Query: 1038 FKPIVVVNKIDRSNARPEWVV 1058
IV VNK+DR+ A E VV
Sbjct: 135 VPRIVFVNKMDRAGADFERVV 155
Score = 167 (63.8 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 54/201 (26%), Positives = 92/201 (45%)
Query: 1117 NSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFK 1176
+ N P + ++G + R+ SG ++S V N K + +I +I
Sbjct: 310 DDNAPFAALAFKIATDPFVGTLTFIRVYSGVLESGSGVY--NSVKQK--RERIGRIVQMH 365
Query: 1177 GLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPL 1236
DR + E +GDI G++E+ G T+CD L + EP +TI V
Sbjct: 366 ANDRTELKEVRAGDIAAAIGLKEVTTGDTLCDNDHKVILERMEFPEPVITI--AVEPKSK 423
Query: 1237 AGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE- 1295
A ++ I +++ + RV + + S +SG GELHL I+++ MRRE
Sbjct: 424 ADQDKMGIALQKLA-------AEDPSFRV-ETDEESSQTLISGMGELHLDIIVDRMRREF 475
Query: 1296 GYELSVSRPRVIFK-TLNGEL 1315
G E +V +P+V ++ T+ G +
Sbjct: 476 GVECNVGKPQVAYRETIRGSV 496
Score = 118 (46.6 bits), Expect = 6.4e-15, Sum P(3) = 6.4e-15
Identities = 37/120 (30%), Positives = 55/120 (45%)
Query: 75 MGHVDHGKTSLLDYI---RKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTA 131
+G V H + D++ ++ + + A T G T H I +DTPGH FT
Sbjct: 40 IGEV-HDGAATTDWMVQEQERGITITSAAVTTFWRGMDAQFTEH-RINIIDTPGHVDFTI 97
Query: 132 MRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRI-KQ 190
R +V D V+V GV PQ+ A VP IV +NK+D+ + +R+ KQ
Sbjct: 98 EVERSLRVLDGAVVVFCGASGVEPQSETVWRQADKYRVPRIVFVNKMDRAGADFERVVKQ 157
Score = 57 (25.1 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 19/85 (22%), Positives = 39/85 (45%)
Query: 1317 EPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFIT 1376
E + L + E++ II+ ++ G +E N + ++ YR RG + + +F+
Sbjct: 450 ESSQTLISGMGELHLDIIVDRMRREFG----VECNVG-KPQVAYRETIRGSVEAEGKFVR 504
Query: 1377 LTRGTGLISHVFEEYAPFYNKSKYD 1401
+ G G HV+ + P + Y+
Sbjct: 505 QSGGRGQFGHVWLKLEPNEEGAGYE 529
Score = 45 (20.9 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 17/77 (22%), Positives = 32/77 (41%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
L EP + V E G ++ LN R G ++ ++ + +P + G+ +
Sbjct: 606 LLEPCMKVEVTTPENYMGDVVGDLNRRRGLIEGMDDGFGGIKIIHAVVPLSEMFGYATDL 665
Query: 1375 ITLTRGTGLISHVFEEY 1391
+ T+G S F +Y
Sbjct: 666 RSATQGRASYSMEFLKY 682
Score = 40 (19.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 1079 VIYTSALHGYANENSKARQGNMIPLFEAILKY 1110
V+ S + GYA + A QG E LKY
Sbjct: 652 VVPLSEMFGYATDLRSATQGRASYSME-FLKY 682
Score = 38 (18.4 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I HVD GKT+ + +
Sbjct: 13 IGICAHVDAGKTTTTERV 30
>UNIPROTKB|P28371 [details] [associations]
symbol:fusA "Elongation factor G 1" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0003924
GO:GO:0006184 GO:GO:0003746 EMBL:BA000022 GenomeReviews:BA000022_GR
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355 OMA:WRYANDS
ProtClustDB:PRK12740 HAMAP:MF_00054_B TIGRFAMs:TIGR00484
EMBL:X65159 PIR:S76751 RefSeq:NP_442851.1 RefSeq:YP_005652912.1
ProteinModelPortal:P28371 IntAct:P28371 STRING:P28371
GeneID:12255272 GeneID:953171 KEGG:syn:slr1463 KEGG:syy:SYNGTS_2959
PATRIC:23843484 Uniprot:P28371
Length = 695
Score = 189 (71.6 bits), Expect = 2.8e-24, Sum P(3) = 2.8e-24
Identities = 48/128 (37%), Positives = 68/128 (53%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I AHVD GKTT + +L+ +G K ++ MD E E ERGITI S S +
Sbjct: 13 IFAHVDAGKTTTTERILKLTGRIHKLGEVHEGESTMDFMEQEAERGITIQSAATSCFWKD 72
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
++N+IDTPGH DF EV R L ++D + + G PQ+ R A ++ +
Sbjct: 73 HQLNVIDTPGHVDFTIEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANDSKVARLIYI 132
Query: 1045 NKIDRSNA 1052
NK+DR+ A
Sbjct: 133 NKLDRTGA 140
Score = 136 (52.9 bits), Expect = 2.8e-24, Sum P(3) = 2.8e-24
Identities = 44/186 (23%), Positives = 89/186 (47%)
Query: 1136 GKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLIT 1195
G + RI SG + S D I+N K + I ++ R + A +GDIV I
Sbjct: 321 GALTFTRIYSGTL-SKGDT-ILNTATGKTER--IGRLVEMHADSREEIESAQAGDIVAIV 376
Query: 1196 GIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDH 1255
G++ + G T+CDP P L + +P ++I + + G ++ + ++
Sbjct: 377 GMKNVQTGHTLCDPKNPATLEPMVFPDPVISIAIKPKKKGMDEKLGMALS-KMVQEDPSF 435
Query: 1256 EIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRR-EGYELSVSRPRVIFK-TLNG 1313
+++ T + ++I + G GELHL I ++ ++R G E+ + +P+V ++ ++
Sbjct: 436 QVE-------TDEESGETI--IKGMGELHLDIKMDILKRTHGVEVEMGKPQVAYRESITQ 486
Query: 1314 ELYEPY 1319
++ + Y
Sbjct: 487 QVSDTY 492
Score = 112 (44.5 bits), Expect = 4.2e-16, Sum P(3) = 4.2e-16
Identities = 42/152 (27%), Positives = 69/152 (45%)
Query: 59 KNITAESLVRAP-IVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
K T E +++ + +G V G+ S +D++ + +E G IT A +
Sbjct: 21 KTTTTERILKLTGRIHKLGEVHEGE-STMDFMEQE----AERG-ITIQSAATSCFWKDHQ 74
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH FT R KV D + V GV PQ+ +A S V ++ INK
Sbjct: 75 LNVIDTPGHVDFTIEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANDSKVARLIYINK 134
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFI 209
+D+ + R+ + + E V+ GA P +
Sbjct: 135 LDRTGADFYRVVKQV--ETVL-----GAKPLV 159
Score = 95 (38.5 bits), Expect = 2.8e-24, Sum P(3) = 2.8e-24
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 1314 ELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNE 1373
++ EP + V E + G ++ LN R G +K+ E VR++ +P + G+ +
Sbjct: 597 QILEPIMAVDVFTPEDHMGDVIGDLNRRRGMIKSQETGPMG-VRVKADVPLSEMFGYIGD 655
Query: 1374 FITLTRGTGLISHVFEEYAP 1393
T+T G G S VF+ YAP
Sbjct: 656 LRTMTSGRGQFSMVFDHYAP 675
Score = 46 (21.3 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 64 ESLVRAPIVTIMGHVDHGKTSLLDYIRK 91
+ L R + I HVD GKT+ + I K
Sbjct: 3 KDLTRYRNIGIFAHVDAGKTTTTERILK 30
>TAIR|locus:2825721 [details] [associations]
symbol:AT1G45332 species:3702 "Arabidopsis thaliana"
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM;IDA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0008135
"translation factor activity, nucleic acid binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IDA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:AC083835
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484
OMA:FMGSAYK IPI:IPI00549153 PIR:D96510 RefSeq:NP_175135.1
UniGene:At.20511 ProteinModelPortal:Q9C641 SMR:Q9C641 STRING:Q9C641
PaxDb:Q9C641 PRIDE:Q9C641 EnsemblPlants:AT1G45332.1 GeneID:841097
KEGG:ath:AT1G45332 GeneFarm:2353 TAIR:At1g45332 InParanoid:Q9C641
PhylomeDB:Q9C641 ProtClustDB:CLSN2681893 Genevestigator:Q9C641
GermOnline:AT1G45332 Uniprot:Q9C641
Length = 754
Score = 224 (83.9 bits), Expect = 3.2e-24, Sum P(4) = 3.2e-24
Identities = 52/137 (37%), Positives = 77/137 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARI-----MDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G + + R MDS ++E+E+GITI S
Sbjct: 70 ISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCT 129
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ ++NIIDTPGH DF EVER L ++D +L++ +V G Q+ V R+ + +
Sbjct: 130 WKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRV 189
Query: 1042 VVVNKIDRSNARPEWVV 1058
+NK+DR A P W V
Sbjct: 190 AFINKLDRMGADP-WKV 205
Score = 135 (52.6 bits), Expect = 3.2e-24, Sum P(4) = 3.2e-24
Identities = 55/195 (28%), Positives = 89/195 (45%)
Query: 1119 NNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGL 1178
+ PL LE + G++ R+ G IK ++ +N + K+ ++
Sbjct: 363 DGPLVALAFKLEEGRF-GQLTYLRVYEGVIKKGDFIINVN----TGKRIKVPRLVRMHSN 417
Query: 1179 DRVLVNEALSGDIVLITGIEEICI-GSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLA 1237
D + EA +G IV + GIE C G T D S + +N+ EP +++ +
Sbjct: 418 DMEDIQEAHAGQIVAVFGIE--CASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSG 475
Query: 1238 GREGKFITTRQIKNRLDHEIKN-NIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREG 1296
G+ K + NR E +GL + +I +SG GELHL I +E MRRE
Sbjct: 476 GQFSKAL------NRFQKEDPTFRVGL---DPESGQTI--ISGMGELHLDIYVERMRRE- 523
Query: 1297 YEL--SVSRPRVIFK 1309
Y++ +V +PRV F+
Sbjct: 524 YKVDATVGKPRVNFR 538
Score = 98 (39.6 bits), Expect = 5.6e-11, Sum P(4) = 5.6e-11
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +DTPGH FT R +V D +LV+ + GV Q+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 161 IAHAKISGVPLIVAINKIDKL 181
+ VP + INK+D++
Sbjct: 178 DRQMRRYEVPRVAFINKLDRM 198
Score = 57 (25.1 bits), Expect = 3.2e-24, Sum P(4) = 3.2e-24
Identities = 17/98 (17%), Positives = 42/98 (42%)
Query: 1305 RVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPS 1364
R+ + + EP + + + QG + +N R G + + + V + +P
Sbjct: 647 RLCYTAARPVILEPVMLVELKVPTEFQGTVAGDINKRKGIIVGNDQEGDDSV-ITANVPL 705
Query: 1365 RGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
+ G+ ++T+G G + ++E++ N+ + L
Sbjct: 706 NNMFGYSTSLRSMTQGKGEFTMEYKEHSAVSNEVQAQL 743
Score = 48 (22.0 bits), Expect = 3.2e-24, Sum P(4) = 3.2e-24
Identities = 16/76 (21%), Positives = 35/76 (46%)
Query: 14 KLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKNITAESLVRAPIVT 73
+L ++ + N+ TA +L + + H S + + + + ES+ + +
Sbjct: 12 RLLRLFSSNKRSSSPTAALLTGDFQLIRHFSA--GTAARVAKDEKEPWWKESMDKLRNIG 69
Query: 74 IMGHVDHGKTSLLDYI 89
I H+D GKT+L + +
Sbjct: 70 ISAHIDSGKTTLTERV 85
>UNIPROTKB|Q8N442 [details] [associations]
symbol:GUF1 "Translation factor GUF1, mitochondrial"
species:9606 "Homo sapiens" [GO:0006412 "translation" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005759 "mitochondrial matrix"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HSSP:P32324 eggNOG:COG0481 HOGENOM:HOG000020624 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393 CTD:60558
HOVERGEN:HBG081580 OMA:KCYGGDA OrthoDB:EOG43JC4B EMBL:AK023282
EMBL:AK025248 EMBL:BC036768 IPI:IPI00296563 RefSeq:NP_068746.2
UniGene:Hs.546419 ProteinModelPortal:Q8N442 SMR:Q8N442
STRING:Q8N442 PhosphoSite:Q8N442 DMDM:74728811 PaxDb:Q8N442
PRIDE:Q8N442 Ensembl:ENST00000281543 GeneID:60558 KEGG:hsa:60558
UCSC:uc003gww.4 GeneCards:GC04P044680 HGNC:HGNC:25799 HPA:HPA003934
neXtProt:NX_Q8N442 PharmGKB:PA143485485 InParanoid:Q8N442
PhylomeDB:Q8N442 ChiTaRS:GUF1 GenomeRNAi:60558 NextBio:65437
ArrayExpress:Q8N442 Bgee:Q8N442 CleanEx:HS_GUF1
Genevestigator:Q8N442 GermOnline:ENSG00000151806 Uniprot:Q8N442
Length = 669
Score = 289 (106.8 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 66/145 (45%), Positives = 90/145 (62%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
+I+AHVDHGK+TL D LL +GT K +N N +++D ++E+ERGIT+ ++ S+ YN
Sbjct: 72 SIVAHVDHGKSTLADRLLELTGTIDKTKN-NKQVLDKLQVERERGITVKAQTASLFYNCE 130
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G + +N+IDTPGH DF EV R LS VLL++DA EG QT A + I
Sbjct: 131 GKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVI 190
Query: 1042 VVVNKIDRSNARPEWVVDATFDLFD 1066
V+NKID NA PE V + +FD
Sbjct: 191 PVINKIDLKNADPERVENQIEKVFD 215
Score = 148 (57.2 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 46/169 (27%), Positives = 78/169 (46%)
Query: 109 YNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISG 168
YN + +DTPGH F+ +R V+LVV A++G+ QT A +
Sbjct: 127 YNCEGKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQ 186
Query: 169 VPLIVAINKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISL 228
+ +I INKID + + +R++ + IP + I ISAK G + +L+ I
Sbjct: 187 LSVIPVINKIDLKNADPERVENQIEKVFDIPSD-----ECIKISAKLGTNVESVLQAII- 240
Query: 229 QAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVA 277
I K P + ++ +S D+ +G +A V + G + D +V+
Sbjct: 241 -ERIPPPKVHRKNPLRALVFDSTFDQYRGVIANVALFDGVVSKGDKIVS 288
Score = 79 (32.9 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 49/230 (21%), Positives = 101/230 (43%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G N+ + +AI++ +P K + NPL+ + + Y G I + G + S D
Sbjct: 226 AKLGTNVESVLQAIIERIPPPKVHRKNPLRALVFDSTFDQYRGVIANVALFDG-VVSKGD 284
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDP 1209
++ + K + +N++ V ++ ++ +G + LI G++++ IG T+C
Sbjct: 285 KIV-SAHTQKTYE--VNEVGVLNPNEQP-THKLYAGQVGYLIAGMKDVTEAQIGDTLCLH 340
Query: 1210 SKP-NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQN 1268
+P LP +P + PL E +K+ ++ N+ + V +
Sbjct: 341 KQPVEPLPGFKSAKPMVFAGMY----PLDQSE-----YNNLKSAIEKLTLNDSSVTVHR- 390
Query: 1269 KHDDSI-----YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTL 1311
D S+ + + G LH+ + + + +E Y SV + P V +K +
Sbjct: 391 --DSSLALGAGWRLGFLGLLHMEVFNQRLEQE-YNASVILTTPTVPYKAV 437
Score = 54 (24.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ HVDHGK++L D
Sbjct: 72 SIVAHVDHGKSTLAD 86
Score = 44 (20.5 bits), Expect = 3.5e-24, Sum P(3) = 3.5e-24
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI-GFQNEFITLTRG 1380
G IM R KN+ ++ RV L+Y P ++ F + +L+ G
Sbjct: 486 GKIMMLCEARRAVQKNMIFIDQNRVMLKYLFPLNEIVVDFYDSLKSLSSG 535
Score = 37 (18.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 317 EELFVILNEKKAREIG 332
EEL ++++ KA IG
Sbjct: 564 EELVTVVHKDKAHSIG 579
>TIGR_CMR|CJE_0542 [details] [associations]
symbol:CJE_0542 "translation elongation factor G"
species:195099 "Campylobacter jejuni RM1221" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:CP000025
GenomeReviews:CP000025_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 KO:K02355 HAMAP:MF_00054_B
TIGRFAMs:TIGR00484 OMA:QEPGKGY HOGENOM:HOG000231587
RefSeq:YP_178559.1 ProteinModelPortal:Q5HVX6 SMR:Q5HVX6
STRING:Q5HVX6 GeneID:3231303 KEGG:cjr:CJE0542 PATRIC:20042806
ProtClustDB:PRK12739 BioCyc:CJEJ195099:GJC0-557-MONOMER
Uniprot:Q5HVX6
Length = 691
Score = 232 (86.7 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 62/155 (40%), Positives = 85/155 (54%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I AH+D GKTT + +L +G K ++ A MD E EKERGITI S + +
Sbjct: 15 IAAHIDAGKTTTSERILFFTGMSHKIGEVHDGAATMDWMEQEKERGITITSAATTCFWKD 74
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
+IN+IDTPGH DF EVER + ++D + + +V G PQ+ V R+A K G IV V
Sbjct: 75 HQINLIDTPGHVDFTIEVERSMRVLDGAVAVFCSVGGVQPQSETVWRQANKYGVPRIVFV 134
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
NK+DR A V D + ++L A L P+
Sbjct: 135 NKMDRIGANFYNVED---QIRNRLKANPVPLQIPI 166
Score = 125 (49.1 bits), Expect = 6.6e-12, Sum P(4) = 6.6e-12
Identities = 31/92 (33%), Positives = 42/92 (45%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A I +DTPGH FT R +V D V V + GV PQ+
Sbjct: 60 GITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGAVAVFCSVGGVQPQSETV 119
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDL 192
A GVP IV +NK+D++ N ++ +
Sbjct: 120 WRQANKYGVPRIVFVNKMDRIGANFYNVEDQI 151
Score = 114 (45.2 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 45/189 (23%), Positives = 87/189 (46%)
Query: 1134 YLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVL 1193
++G++ R+ G ++S N DK K +I ++ R + +G+I
Sbjct: 320 FVGQLTFVRVYRGCLES--GSYAYNSTKDK--KERIGRLLKMHSNKREEIKVLYAGEIGA 375
Query: 1194 ITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRL 1253
+ G+++ G T+ S+ + + + +D P I+ V A +E I N+L
Sbjct: 376 VVGLKDTLTGDTLA--SEKDKVILERMDFPDPVISVAVEPKTKADQEKMSIAL----NKL 429
Query: 1254 DHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK-TL 1311
E + RV+ ++ +SG GELHL I+++ M RE E V +P+V ++ T+
Sbjct: 430 AQE---DPSFRVSTDEESGQTI-ISGMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETI 485
Query: 1312 NGELYEPYE 1320
+ + Y+
Sbjct: 486 RKTVEQEYK 494
Score = 70 (29.7 bits), Expect = 4.0e-24, Sum P(3) = 4.0e-24
Identities = 20/94 (21%), Positives = 41/94 (43%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
+ EP + V+ E G ++ LN R G + +++ ++ + P + G+ +
Sbjct: 599 ILEPMMKVEVETPEDYMGDVIGDLNKRRGQVNSMDERGGNKIITAF-CPLAEMFGYSTDL 657
Query: 1375 ITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNG 1408
+ T+G S F+ Y ++ K+RNG
Sbjct: 658 RSQTQGRATYSMEFDHYDEVPKNVADEIIKKRNG 691
Score = 48 (22.0 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 1345 LKNIEIN-EKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD-L 1402
L+ ++ E + ++ YR R + + ++ + G G HVF P S Y+ +
Sbjct: 465 LREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFV 524
Query: 1403 GKRRNGVLISQY 1414
+ GV+ +Y
Sbjct: 525 NDIKGGVIPKEY 536
Score = 37 (18.1 bits), Expect = 6.6e-12, Sum P(4) = 6.6e-12
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+ + I
Sbjct: 13 IGIAAHIDAGKTTTSERI 30
>GENEDB_PFALCIPARUM|PFL1590c [details] [associations]
symbol:PFL1590c "elongation factor g, putative"
species:5833 "Plasmodium falciparum" [GO:0005739 "mitochondrion"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
EMBL:AE014188 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HOGENOM:HOG000231585 KO:K02355 HSSP:P13551
OMA:FMGSAYK RefSeq:XP_001350724.1 ProteinModelPortal:Q8I592
IntAct:Q8I592 MINT:MINT-1692785 EnsemblProtists:PFL1590c:mRNA
GeneID:811370 KEGG:pfa:PFL1590c EuPathDB:PlasmoDB:PF3D7_1233000
ProtClustDB:CLSZ2514935 Uniprot:Q8I592
Length = 803
Score = 240 (89.5 bits), Expect = 4.9e-24, Sum P(3) = 4.9e-24
Identities = 61/139 (43%), Positives = 80/139 (57%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSK--NC 978
I AH+D GKTTL + +L +G R N + A MDS E+E+E+GITI S NC
Sbjct: 49 ISAHIDAGKTTLTERILYYTGKIKSIHEVRGNDGVGAT-MDSMELEREKGITIQSATTNC 107
Query: 979 SIEYNGTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKL 1036
E N + INIIDTPGH DF EVER L ++D+ +L+I V G QT V R+ +
Sbjct: 108 VWEINNKKYNINIIDTPGHVDFTIEVERSLRVLDSAILVICGVSGVQSQTLTVNRQMDRY 167
Query: 1037 GFKPIVVVNKIDRSNARPE 1055
I+ +NK+DR A E
Sbjct: 168 HIPRILFINKLDRDGANVE 186
Score = 115 (45.5 bits), Expect = 4.9e-24, Sum P(3) = 4.9e-24
Identities = 55/206 (26%), Positives = 96/206 (46%)
Query: 1116 DNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVF 1175
DN N P+ + ++ + G++ RI G+IK + +I N +K K +++
Sbjct: 410 DN-NLPMVGFLFKIQEDNMYGQMSYFRIYQGKIKKKE--MITNMMTNKKEIVK-KIMKMH 465
Query: 1176 KGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSP 1235
+ + VNEA +GDIV I GI G+T + N L +LNI P I+ V
Sbjct: 466 SNMAKE-VNEASAGDIVAICGING-STGTTYTNGINTN-LHLLNIFIPKPVISVAVEIL- 521
Query: 1236 LAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE 1295
++G + N+ E ++ T + ++I+E G GEL L I E ++RE
Sbjct: 522 ---KKGDMTKLTKALNKFTKE-DPTFYVK-TDEQTKETIFE--GIGELQLEIYKERLKRE 574
Query: 1296 -GYELSVSRPRVIFKTLNGELYEPYE 1320
+++ P++ FK + +P+E
Sbjct: 575 FNINVNLKNPKINFKET---ITKPFE 597
Score = 110 (43.8 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 117 SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
+I +DTPGH FT R +V D +LV+ GV QT +P I+ IN
Sbjct: 117 NINIIDTPGHVDFTIEVERSLRVLDSAILVICGVSGVQSQTLTVNRQMDRYHIPRILFIN 176
Query: 177 KIDKLDINLDR 187
K+D+ N++R
Sbjct: 177 KLDRDGANVER 187
Score = 63 (27.2 bits), Expect = 4.9e-24, Sum P(3) = 4.9e-24
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 1330 NQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFE 1389
+Q I+ + R G + NI +N + + IP + + + NE +T+G G + F
Sbjct: 725 HQSNILTSITKRKGLVNNI-VNNLNIIYIYADIPLKHMFNYINEIRAITQGQGTYTMEFS 783
Query: 1390 EYAPFYNKSKYDL 1402
Y SK DL
Sbjct: 784 RYEQV---SKNDL 793
Score = 43 (20.2 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 47 IGISAHIDAGKTTLTERI 64
Score = 37 (18.1 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 351 KTENMFNDINKEKVKNLL 368
K ++++ I K +KNL+
Sbjct: 287 KKNDIYSSIRKSTIKNLV 304
>UNIPROTKB|Q8I592 [details] [associations]
symbol:PFL1590c "Elongation factor G, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
EMBL:AE014188 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HOGENOM:HOG000231585 KO:K02355 HSSP:P13551
OMA:FMGSAYK RefSeq:XP_001350724.1 ProteinModelPortal:Q8I592
IntAct:Q8I592 MINT:MINT-1692785 EnsemblProtists:PFL1590c:mRNA
GeneID:811370 KEGG:pfa:PFL1590c EuPathDB:PlasmoDB:PF3D7_1233000
ProtClustDB:CLSZ2514935 Uniprot:Q8I592
Length = 803
Score = 240 (89.5 bits), Expect = 4.9e-24, Sum P(3) = 4.9e-24
Identities = 61/139 (43%), Positives = 80/139 (57%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSK--NC 978
I AH+D GKTTL + +L +G R N + A MDS E+E+E+GITI S NC
Sbjct: 49 ISAHIDAGKTTLTERILYYTGKIKSIHEVRGNDGVGAT-MDSMELEREKGITIQSATTNC 107
Query: 979 SIEYNGTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKL 1036
E N + INIIDTPGH DF EVER L ++D+ +L+I V G QT V R+ +
Sbjct: 108 VWEINNKKYNINIIDTPGHVDFTIEVERSLRVLDSAILVICGVSGVQSQTLTVNRQMDRY 167
Query: 1037 GFKPIVVVNKIDRSNARPE 1055
I+ +NK+DR A E
Sbjct: 168 HIPRILFINKLDRDGANVE 186
Score = 115 (45.5 bits), Expect = 4.9e-24, Sum P(3) = 4.9e-24
Identities = 55/206 (26%), Positives = 96/206 (46%)
Query: 1116 DNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVF 1175
DN N P+ + ++ + G++ RI G+IK + +I N +K K +++
Sbjct: 410 DN-NLPMVGFLFKIQEDNMYGQMSYFRIYQGKIKKKE--MITNMMTNKKEIVK-KIMKMH 465
Query: 1176 KGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSP 1235
+ + VNEA +GDIV I GI G+T + N L +LNI P I+ V
Sbjct: 466 SNMAKE-VNEASAGDIVAICGING-STGTTYTNGINTN-LHLLNIFIPKPVISVAVEIL- 521
Query: 1236 LAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE 1295
++G + N+ E ++ T + ++I+E G GEL L I E ++RE
Sbjct: 522 ---KKGDMTKLTKALNKFTKE-DPTFYVK-TDEQTKETIFE--GIGELQLEIYKERLKRE 574
Query: 1296 -GYELSVSRPRVIFKTLNGELYEPYE 1320
+++ P++ FK + +P+E
Sbjct: 575 FNINVNLKNPKINFKET---ITKPFE 597
Score = 110 (43.8 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 117 SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
+I +DTPGH FT R +V D +LV+ GV QT +P I+ IN
Sbjct: 117 NINIIDTPGHVDFTIEVERSLRVLDSAILVICGVSGVQSQTLTVNRQMDRYHIPRILFIN 176
Query: 177 KIDKLDINLDR 187
K+D+ N++R
Sbjct: 177 KLDRDGANVER 187
Score = 63 (27.2 bits), Expect = 4.9e-24, Sum P(3) = 4.9e-24
Identities = 20/73 (27%), Positives = 33/73 (45%)
Query: 1330 NQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFE 1389
+Q I+ + R G + NI +N + + IP + + + NE +T+G G + F
Sbjct: 725 HQSNILTSITKRKGLVNNI-VNNLNIIYIYADIPLKHMFNYINEIRAITQGQGTYTMEFS 783
Query: 1390 EYAPFYNKSKYDL 1402
Y SK DL
Sbjct: 784 RYEQV---SKNDL 793
Score = 43 (20.2 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 47 IGISAHIDAGKTTLTERI 64
Score = 37 (18.1 bits), Expect = 1.3e-09, Sum P(5) = 1.3e-09
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 351 KTENMFNDINKEKVKNLL 368
K ++++ I K +KNL+
Sbjct: 287 KKNDIYSSIRKSTIKNLV 304
>POMBASE|SPAC1B3.04c [details] [associations]
symbol:SPAC1B3.04c "mitochondrial GTPase involved in
translation Guf1 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003924 "GTPase activity" evidence=ISO] [GO:0005525 "GTP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=ISO] [GO:0043022
"ribosome binding" evidence=ISO] [GO:0070131 "positive regulation
of mitochondrial translation" evidence=ISO] HAMAP:MF_00071
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 PomBase:SPAC1B3.04c InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005743 GO:GO:0005759 GO:GO:0006412
GO:GO:0003924 GO:GO:0043022 GO:GO:0070131 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0481 HOGENOM:HOG000020624
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 PIR:T38022 RefSeq:NP_594788.2 STRING:O13869
EnsemblFungi:SPAC1B3.04c.1 GeneID:2542529 OrthoDB:EOG4PCF1D
NextBio:20803582 Uniprot:O13869
Length = 652
Score = 235 (87.8 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 56/146 (38%), Positives = 83/146 (56%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSI--EYN 983
A+IAH+DHGK+TL D +L+ +G ++ N + +D E+E+ RGIT+ ++ CS+ Y+
Sbjct: 62 AVIAHIDHGKSTLSDCILKLTGVINEH-NFRNQFLDKLEVERRRGITVKAQTCSMIYYYH 120
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G +N+IDTPGH DF EV L+ + +LL+DA +G QT A I
Sbjct: 121 GQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQGIQAQTLSNFYMAFSQNLVII 180
Query: 1042 VVVNKIDRSNA---RPEWVVDATFDL 1064
V+NK+D A R V TFD+
Sbjct: 181 PVLNKVDLPTADVDRTLIQVQQTFDI 206
Score = 131 (51.2 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 59/237 (24%), Positives = 108/237 (45%)
Query: 1099 NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMN 1158
N+ + I++ +P K + N PL+ +I Y+SY G IG+ RI+ G IK V+ +N
Sbjct: 221 NVEQILPEIIQKIPPPKGSENAPLRCLLIDSWYNSYQGVIGLVRIMEGFIKKGGKVMSVN 280
Query: 1159 GPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLIT----GIEEICIGSTICD-PSKPN 1213
K ++ Q+ + D V+ +G + I I+E +G T S
Sbjct: 281 ----TGRKYEVQQVGIMYP-DMTEVSRLRAGQVGYIIWNMKNIDEAIVGDTYSTIGSNVE 335
Query: 1214 GLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDS 1273
LP +I + + + PL G + + ++ + ++ N+ + V Q ++ +
Sbjct: 336 ALPGFSIPQSMVYVGAF----PLDGSDYE-----RLNDNIEQLALNDRAINV-QKENSSA 385
Query: 1274 I---YEVSGRGELHLTILIENMRRE-GYELSVSRPRVIF--KTLNG-ELYEPYENLF 1323
+ + + G LHL++ I+ ++ E G EL ++ P V + K NG E NLF
Sbjct: 386 LGMGWRLGFLGTLHLSVFIDRLKDEYGKELLITSPTVPYRIKYKNGREEVISNPNLF 442
>UNIPROTKB|D4A6V2 [details] [associations]
symbol:Guf1 "Translation factor GUF1, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
RGD:1310774 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743
GO:GO:0005759 GO:GO:0006412 GO:GO:0003924 GO:GO:0006184
GO:GO:0043022 GO:GO:0045727 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 IPI:IPI00948053 Ensembl:ENSRNOT00000065548
ArrayExpress:D4A6V2 Uniprot:D4A6V2
Length = 651
Score = 285 (105.4 bits), Expect = 6.4e-24, Sum P(4) = 6.4e-24
Identities = 67/151 (44%), Positives = 92/151 (60%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
+IIAHVDHGK+TL D LL +GT K Q N +++D ++E+ERGIT+ ++ S+ Y+
Sbjct: 54 SIIAHVDHGKSTLADRLLELTGTIDKTQK-NKQVLDKLQVERERGITVKAQTASLFYSFG 112
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G + +N+IDTPGH DF EV R LS VLL++DA EG QT A + I
Sbjct: 113 GKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVI 172
Query: 1042 VVVNKIDRSNARPEWV---VDATFDLFDKLC 1069
V+NKID NA PE V ++ FD+ + C
Sbjct: 173 PVINKIDLKNADPERVGKQIEKVFDIPSEEC 203
Score = 153 (58.9 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 46/160 (28%), Positives = 78/160 (48%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R V+LVV A++G+ QT A + + +I INK
Sbjct: 118 LNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVIPVINK 177
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + + +R+ + + IP E I ISAK G ++ +L+ + I K
Sbjct: 178 IDLKNADPERVGKQIEKVFDIPSE-----ECIKISAKLGTNVDSVLQAVI--ERIPPPKV 230
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVA 277
P K ++ +S D+ +G VA++ + G L D +V+
Sbjct: 231 HRANPLKALVFDSTFDQYRGVVASIALFDGMLSKGDKIVS 270
Score = 64 (27.6 bits), Expect = 6.4e-24, Sum P(4) = 6.4e-24
Identities = 46/247 (18%), Positives = 105/247 (42%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G N+ + +A+++ +P K + NPL+ + + Y G + + G +
Sbjct: 208 AKLGTNVDSVLQAVIERIPPPKVHRANPLKALVFDSTFDQYRGVVASIALFDGMLSKGDK 267
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDP 1209
+V + ++NQ+ + ++ ++ +G + LI G++++ IG T+
Sbjct: 268 IVSAH----TKKTYEVNQVGILNPNEQP-THKLYAGQVGFLIAGMKDVTEAQIGDTLYLH 322
Query: 1210 SKP-NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQN 1268
+ P LP +P + P+ E +K+ ++ N+ + V +
Sbjct: 323 NHPVEPLPGFKSAKPMVFAGVY----PIDQSE-----YNNLKSAIEKLTLNDSSVTVHR- 372
Query: 1269 KHDDSI-----YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTL--NGELYEPY 1319
D S+ + + G LH+ + + + +E Y SV + P V +K + + +L + Y
Sbjct: 373 --DSSLALGAGWRLGFLGLLHMEVFNQRLEQE-YNASVILTTPTVPYKAVLSSAKLIKEY 429
Query: 1320 ENLFVDI 1326
+ + I
Sbjct: 430 KEKEITI 436
Score = 54 (24.1 bits), Expect = 6.4e-24, Sum P(4) = 6.4e-24
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ HVDHGK++L D
Sbjct: 54 SIIAHVDHGKSTLAD 68
Score = 48 (22.0 bits), Expect = 6.4e-24, Sum P(4) = 6.4e-24
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI-GFQNEFITLTRG 1380
G IM+ R KN+ ++ RV L+Y P ++ F + +L+ G
Sbjct: 468 GKIMELCQARRAIQKNMTFIDENRVMLKYLFPLNEIVVDFYDSLKSLSSG 517
Score = 45 (20.9 bits), Expect = 5.5e-22, Sum P(4) = 5.5e-22
Identities = 27/111 (24%), Positives = 53/111 (47%)
Query: 1111 VPVHKDNSNNPLQLQIISLEYSSYLGKIGI--GRILSGRIKSLQDV-VIMNGPDDKPNKA 1167
V VH+D+S ++L LG +G+ + + R++ + VI+ P P KA
Sbjct: 368 VTVHRDSS--------LALGAGWRLGFLGLLHMEVFNQRLEQEYNASVILTTPT-VPYKA 418
Query: 1168 KINQ---IRVFKGLDRVLVNEALSGDIVLITG-IEEICIGSTICDPSKPNG 1214
++ I+ +K + ++N A D +T +E + +G T+ P++ G
Sbjct: 419 VLSSAKLIKEYKEKEITIINPAQFPDKSKVTEYLEPVVLG-TVITPTEYTG 468
>TAIR|locus:2055611 [details] [associations]
symbol:AT2G45030 species:3702 "Arabidopsis thaliana"
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM;IDA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0008135
"translation factor activity, nucleic acid binding" evidence=ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0046686 EMBL:CP002685 GO:GO:0003924
GO:GO:0006184 GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 KO:K02355 HAMAP:MF_00054_B TIGRFAMs:TIGR00484
IPI:IPI00541299 RefSeq:NP_182029.1 UniGene:At.48592
ProteinModelPortal:F4IW10 SMR:F4IW10 PRIDE:F4IW10
EnsemblPlants:AT2G45030.1 GeneID:819110 KEGG:ath:AT2G45030
OMA:ADESIST ArrayExpress:F4IW10 Uniprot:F4IW10
Length = 754
Score = 224 (83.9 bits), Expect = 7.0e-24, Sum P(3) = 7.0e-24
Identities = 52/137 (37%), Positives = 77/137 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARI-----MDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G + + R MDS ++E+E+GITI S
Sbjct: 70 ISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCT 129
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ ++NIIDTPGH DF EVER L ++D +L++ +V G Q+ V R+ + +
Sbjct: 130 WKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRV 189
Query: 1042 VVVNKIDRSNARPEWVV 1058
+NK+DR A P W V
Sbjct: 190 AFINKLDRMGADP-WKV 205
Score = 135 (52.6 bits), Expect = 7.0e-24, Sum P(3) = 7.0e-24
Identities = 55/195 (28%), Positives = 89/195 (45%)
Query: 1119 NNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGL 1178
+ PL LE + G++ R+ G IK ++ +N + K+ ++
Sbjct: 363 DGPLVALAFKLEEGRF-GQLTYLRVYEGVIKKGDFIINVN----TGKRIKVPRLVRMHSN 417
Query: 1179 DRVLVNEALSGDIVLITGIEEICI-GSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLA 1237
D + EA +G IV + GIE C G T D S + +N+ EP +++ +
Sbjct: 418 DMEDIQEAHAGQIVAVFGIE--CASGDTFTDGSVKYTMTSMNVPEPVMSLAVQPVSKDSG 475
Query: 1238 GREGKFITTRQIKNRLDHEIKN-NIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREG 1296
G+ K + NR E +GL + +I +SG GELHL I +E MRRE
Sbjct: 476 GQFSKAL------NRFQKEDPTFRVGL---DPESGQTI--ISGMGELHLDIYVERMRRE- 523
Query: 1297 YEL--SVSRPRVIFK 1309
Y++ +V +PRV F+
Sbjct: 524 YKVDATVGKPRVNFR 538
Score = 98 (39.6 bits), Expect = 7.0e-11, Sum P(4) = 7.0e-11
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +DTPGH FT R +V D +LV+ + GV Q+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 161 IAHAKISGVPLIVAINKIDKL 181
+ VP + INK+D++
Sbjct: 178 DRQMRRYEVPRVAFINKLDRM 198
Score = 57 (25.1 bits), Expect = 7.0e-24, Sum P(3) = 7.0e-24
Identities = 17/98 (17%), Positives = 42/98 (42%)
Query: 1305 RVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPS 1364
R+ + + EP + + + QG + +N R G + + + V + +P
Sbjct: 647 RLCYTAARPVILEPVMLVELKVPTEFQGTVAGDINKRKGIIVGNDQEGDDSV-ITANVPL 705
Query: 1365 RGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
+ G+ ++T+G G + ++E++ N+ + L
Sbjct: 706 NNMFGYSTSLRSMTQGKGEFTMEYKEHSAVSNEVQAQL 743
Score = 47 (21.6 bits), Expect = 7.0e-11, Sum P(4) = 7.0e-11
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 64 ESLVRAPIVTIMGHVDHGKTSLLDYI 89
ES+ + + I H+D GKT+L + +
Sbjct: 60 ESMDKLRNIGISAHIDSGKTTLTERV 85
>RGD|1310774 [details] [associations]
symbol:Guf1 "GUF1 GTPase homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0043022 "ribosome
binding" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] HAMAP:MF_00071 InterPro:IPR000795
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 RGD:1310774
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743 GO:GO:0005759
GO:GO:0006412 GO:GO:0003924 GO:GO:0006184 GO:GO:0043022
GO:GO:0045727 Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 IPI:IPI00565316
Ensembl:ENSRNOT00000040246 UCSC:RGD:1310774 ArrayExpress:D4A8B4
Uniprot:D4A8B4
Length = 563
Score = 285 (105.4 bits), Expect = 1.1e-23, Sum P(4) = 1.1e-23
Identities = 67/151 (44%), Positives = 92/151 (60%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
+IIAHVDHGK+TL D LL +GT K Q N +++D ++E+ERGIT+ ++ S+ Y+
Sbjct: 54 SIIAHVDHGKSTLADRLLELTGTIDKTQK-NKQVLDKLQVERERGITVKAQTASLFYSFG 112
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G + +N+IDTPGH DF EV R LS VLL++DA EG QT A + I
Sbjct: 113 GKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVI 172
Query: 1042 VVVNKIDRSNARPEWV---VDATFDLFDKLC 1069
V+NKID NA PE V ++ FD+ + C
Sbjct: 173 PVINKIDLKNADPERVGKQIEKVFDIPSEEC 203
Score = 153 (58.9 bits), Expect = 2.5e-08, Sum P(4) = 2.5e-08
Identities = 46/160 (28%), Positives = 78/160 (48%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R V+LVV A++G+ QT A + + +I INK
Sbjct: 118 LNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVIPVINK 177
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + + +R+ + + IP E I ISAK G ++ +L+ + I K
Sbjct: 178 IDLKNADPERVGKQIEKVFDIPSE-----ECIKISAKLGTNVDSVLQAVI--ERIPPPKV 230
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVA 277
P K ++ +S D+ +G VA++ + G L D +V+
Sbjct: 231 HRANPLKALVFDSTFDQYRGVVASIALFDGMLSKGDKIVS 270
Score = 55 (24.4 bits), Expect = 1.1e-23, Sum P(4) = 1.1e-23
Identities = 13/62 (20%), Positives = 29/62 (46%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G N+ + +A+++ +P K + NPL+ + + Y G + + G +
Sbjct: 208 AKLGTNVDSVLQAVIERIPPPKVHRANPLKALVFDSTFDQYRGVVASIALFDGMLSKGDK 267
Query: 1154 VV 1155
+V
Sbjct: 268 IV 269
Score = 54 (24.1 bits), Expect = 1.1e-23, Sum P(4) = 1.1e-23
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ HVDHGK++L D
Sbjct: 54 SIIAHVDHGKSTLAD 68
Score = 48 (22.0 bits), Expect = 1.1e-23, Sum P(4) = 1.1e-23
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI-GFQNEFITLTRG 1380
G IM+ R KN+ ++ RV L+Y P ++ F + +L+ G
Sbjct: 380 GKIMELCQARRAIQKNMTFIDENRVMLKYLFPLNEIVVDFYDSLKSLSSG 429
Score = 48 (22.0 bits), Expect = 5.8e-23, Sum P(4) = 5.8e-23
Identities = 31/128 (24%), Positives = 61/128 (47%)
Query: 1101 IPLFEAIL----KYVPVHKDNSNNPLQLQIISL-EYSSY--LGKIGI--GRILSGRIKSL 1151
I LF+ +L K V H + Q+ I++ E ++ LG +G+ + + R++
Sbjct: 255 IALFDGMLSKGDKIVSAHTKKTYEVNQVGILNPNEQPTHKLLGFLGLLHMEVFNQRLEQE 314
Query: 1152 QDV-VIMNGPDDKPNKAKINQ---IRVFKGLDRVLVNEALSGDIVLITG-IEEICIGSTI 1206
+ VI+ P P KA ++ I+ +K + ++N A D +T +E + +G T+
Sbjct: 315 YNASVILTTPT-VPYKAVLSSAKLIKEYKEKEITIINPAQFPDKSKVTEYLEPVVLG-TV 372
Query: 1207 CDPSKPNG 1214
P++ G
Sbjct: 373 ITPTEYTG 380
>TIGR_CMR|SPO_3499 [details] [associations]
symbol:SPO_3499 "translation elongation factor G"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003924 GO:GO:0006184
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
HAMAP:MF_00054_B TIGRFAMs:TIGR00484 ProtClustDB:PRK00007
OMA:EEYTGGI RefSeq:YP_168694.1 ProteinModelPortal:Q5LMR4
PRIDE:Q5LMR4 GeneID:3195147 KEGG:sil:SPO3499 PATRIC:23380465
Uniprot:Q5LMR4
Length = 705
Score = 204 (76.9 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 58/142 (40%), Positives = 79/142 (55%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN-----ARIMDSNEIEKERGITIFSKNCSIE 981
I+AH+D GKTT + +L +G K+ NI A MD E E+ERGITI S +
Sbjct: 15 IMAHIDAGKTTCSERILYYTG---KSHNIGEVHDGAATMDWMEQEQERGITITSAATTTF 71
Query: 982 YNGT-----------RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVT 1030
+ T R+NIIDTPGH DF EVER L+++D + ++DA G PQT V
Sbjct: 72 WERTEDGATADTPKHRLNIIDTPGHVDFTIEVERSLAVLDGAVCVLDANAGVEPQTETVW 131
Query: 1031 RKALKLGFKPIVVVNKIDRSNA 1052
R+A + +V VNK+D+ A
Sbjct: 132 RQADRYKVPRMVFVNKMDKIGA 153
Score = 148 (57.2 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 49/189 (25%), Positives = 92/189 (48%)
Query: 1134 YLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVL 1193
++G + R+ SG +K D ++ + K K ++ ++ + +R ++EA +GDI+
Sbjct: 335 FVGSLTFTRVYSGVLKK-GDTMLNS---TKGKKERVGRMMMMHSNNREEIDEAFAGDIIA 390
Query: 1194 ITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRL 1253
+ G+++ G T+CD P L + +P + I G + K Q RL
Sbjct: 391 LAGLKDTTTGDTLCDAKDPVVLETMTFPDPVIEIAVEPKTK---GDQEKM---SQGLARL 444
Query: 1254 DHEIKNNIGLRV-TQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK-T 1310
E + RV T + +I + G GELHL IL++ ++RE E ++ P+V ++ T
Sbjct: 445 AAE---DPSFRVETDIESGQTI--MKGMGELHLDILVDRLKREFKVEANIGAPQVAYRET 499
Query: 1311 LNGELYEPY 1319
++ E+ Y
Sbjct: 500 ISKEVEHTY 508
Score = 116 (45.9 bits), Expect = 4.3e-14, Sum P(4) = 4.3e-14
Identities = 47/143 (32%), Positives = 66/143 (46%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH FT R V D V V+ A+ GV PQT A VP +V +NK
Sbjct: 88 LNIIDTPGHVDFTIEVERSLAVLDGAVCVLDANAGVEPQTETVWRQADRYKVPRMVFVNK 147
Query: 178 IDKLD---INLDRIKQDLISEQVIPEEYGGASPFISISAKTGV-GINKL--LENISLQAE 231
+DK+ N R+ +D + +P G I I A+T + G+ L +E Q E
Sbjct: 148 MDKIGADFFNCVRMIEDRTGARAVP--VG-----IPIGAETELEGLVDLVTMEEWLWQGE 200
Query: 232 ILE---LKAPVTTPAKGVIIESR 251
L +KAP+ K + E R
Sbjct: 201 DLGASWVKAPIRDSLKDMAEEWR 223
Score = 61 (26.5 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 19/85 (22%), Positives = 35/85 (41%)
Query: 1309 KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
K +L EP + V E G I+ L R G + E + + + +P +
Sbjct: 608 KKAGAKLLEPIMKVEVITPEEYTGGIIGDLTSRRGQVSGQE-SRGNAIAINAFVPLANMF 666
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAP 1393
G+ N +++ G + +F+ Y P
Sbjct: 667 GYINTLRSMSSGRAQFTMLFDHYDP 691
Score = 42 (19.8 bits), Expect = 4.3e-14, Sum P(4) = 4.3e-14
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 74 IMGHVDHGKTSLLDYI 89
IM H+D GKT+ + I
Sbjct: 15 IMAHIDAGKTTCSERI 30
Score = 38 (18.4 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 351 KTENMFNDINKEKVKNLLIIIKTDVYGS 378
+TE ++ ++ KV ++ + K D G+
Sbjct: 126 QTETVWRQADRYKVPRMVFVNKMDKIGA 153
>UNIPROTKB|F1NX95 [details] [associations]
symbol:GUF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924
GO:GO:0006184 Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393
GeneTree:ENSGT00550000074940 OMA:KCYGGDA EMBL:AADN02031260
IPI:IPI00572781 Ensembl:ENSGALT00000022989 ArrayExpress:F1NX95
Uniprot:F1NX95
Length = 661
Score = 284 (105.0 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 67/145 (46%), Positives = 87/145 (60%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
+IIAHVDHGK+TL D LL +GT K N +++D ++E+ERGIT+ +++ S+ YN
Sbjct: 64 SIIAHVDHGKSTLADRLLEITGTIAKTDR-NKQVLDKLQVERERGITVKAQSASLFYNYK 122
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G +N+IDTPGH DF EV R LS VLL++DA EG QT A + I
Sbjct: 123 GVNYLLNLIDTPGHVDFNYEVSRSLSACQGVLLVVDANEGIQAQTVANFYLAFEAQLAII 182
Query: 1042 VVVNKIDRSNARPEWVVDATFDLFD 1066
V+NKID NA PE V LFD
Sbjct: 183 PVINKIDLKNADPERVEKQIEKLFD 207
Score = 166 (63.5 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 66/241 (27%), Positives = 113/241 (46%)
Query: 56 EYNKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNH 115
++ K+ A+ L+ I + D K +LD ++ V E G IT + ++ N+
Sbjct: 70 DHGKSTLADRLLE--ITGTIAKTDRNK-QVLDKLQ----VERERG-ITVKAQSASLFYNY 121
Query: 116 GSITFL----DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPL 171
+ +L DTPGH F +R V+LVV A++G+ QT A + + +
Sbjct: 122 KGVNYLLNLIDTPGHVDFNYEVSRSLSACQGVLLVVDANEGIQAQTVANFYLAFEAQLAI 181
Query: 172 IVAINKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAE 231
I INKID + + +R+++ + IP + I ISAK G I+K+LE + +
Sbjct: 182 IPVINKIDLKNADPERVEKQIEKLFDIP-----VNECIRISAKQGTNIDKVLEKVI--EK 234
Query: 232 ILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNEN 291
I + T P K ++ +S D +G VA V + G ++ +V+ + R +NE
Sbjct: 235 IPPPQCNTTDPLKALVFDSTFDHYRGVVANVAVFGGEIQKGHRIVSAHTNKRYE--VNEV 292
Query: 292 G 292
G
Sbjct: 293 G 293
Score = 76 (31.8 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
Identities = 46/230 (20%), Positives = 102/230 (44%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+QG N+ + E +++ +P + N+ +PL+ + + Y G + + G I+
Sbjct: 218 AKQGTNIDKVLEKVIEKIPPPQCNTTDPLKALVFDSTFDHYRGVVANVAVFGGEIQKGHR 277
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDP 1209
+V + +K + ++N++ + ++ ++ +G + LI G++E+ IG T+
Sbjct: 278 IV--SAHTNK--RYEVNEVGILTPNEQP-THKLYAGQVGYLIAGMKEVTEAQIGDTLFMY 332
Query: 1210 SKP-NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQN 1268
+P LP +P + P+ E +K+ L+ N+ + V +
Sbjct: 333 KQPVEPLPGFKSAKPMVFAGMY----PVDQTE-----YNNLKSALERLTLNDSSVTVHR- 382
Query: 1269 KHDDSI-----YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTL 1311
D S+ + + G LH+ + + + +E Y SV + P V +K +
Sbjct: 383 --DSSLALGAGWRLGFLGLLHMEVFNQRLEQE-YNTSVILTAPTVPYKAV 429
>UNIPROTKB|B3MK91 [details] [associations]
symbol:ico "Elongation factor G, mitochondrial"
species:7217 "Drosophila ananassae" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 EMBL:CH902620
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 KO:K02355 TIGRFAMs:TIGR00484 OrthoDB:EOG40CFXZ
GO:GO:0070125 RefSeq:XP_001963254.1 STRING:B3MK91
EnsemblMetazoa:FBtr0118734 GeneID:6496862 KEGG:dan:Dana_GF14034
FlyBase:FBgn0091061 InParanoid:B3MK91 Uniprot:B3MK91
Length = 745
Score = 237 (88.5 bits), Expect = 1.5e-23, Sum P(4) = 1.5e-23
Identities = 56/134 (41%), Positives = 76/134 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 47 ISAHIDSGKTTLTERILFYTGRIVEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 105
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 106 LWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 165
Query: 1041 IVVVNKIDRSNARP 1054
+ +NK+DR + P
Sbjct: 166 LAFINKLDRMGSNP 179
Score = 125 (49.1 bits), Expect = 2.6e-12, Sum P(5) = 2.6e-12
Identities = 33/95 (34%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 95 GITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 154
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ N R+ + S+
Sbjct: 155 NRQMKRYNVPCLAFINKLDRMGSNPYRVLSQMRSK 189
Score = 101 (40.6 bits), Expect = 1.5e-23, Sum P(4) = 1.5e-23
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T K N + + + EP +++ NN+
Sbjct: 403 VNEVYAGDIFALFGVD--CASGDTFTTNPKNNLAMESIFVPEPVVSMAIKPNNTKDRDNF 460
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I ++ H +N ++ T VSG GELHL I + M RE G +
Sbjct: 461 SKAIARFTKEDPTFHFFFDN-DVKETL---------VSGMGELHLEIYAQRMEREYGCPV 510
Query: 1300 SVSRPRVIFK-TLNG 1313
++ +P+V F+ TL G
Sbjct: 511 TLGKPKVAFRETLVG 525
Score = 75 (31.5 bits), Expect = 1.5e-23, Sum P(4) = 1.5e-23
Identities = 22/87 (25%), Positives = 39/87 (44%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ N ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 631 VFQNGNWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 689
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G + + Y+P
Sbjct: 690 MFGYAGELRSSTQGKGEFTMEYSRYSP 716
Score = 52 (23.4 bits), Expect = 3.3e-21, Sum P(4) = 3.3e-21
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ ++ G+L SG ++ ++LQD G
Sbjct: 562 EFVDETVGT----NVPKQFVPGVEKGYREMAEK--GML----SGHKLSGIRFRLQDGGHH 611
Query: 1433 FINHNDLVY----EGMIIGIHSRDNDLLVNPIKEKQLT 1466
++ ++L + G I + N ++ PI ++T
Sbjct: 612 IVDSSELAFMLAAHGAIKEVFQNGNWQILEPIMLVEVT 649
Score = 48 (22.0 bits), Expect = 2.6e-12, Sum P(5) = 2.6e-12
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 295 ILEAGPSIPVEIQGLTKVPFSGEELF-VILN---EKKAREIGL-FR--QGKFRDV---KL 344
+LE P+ P E++ L V G++ ++LN + K +GL F+ G+F + +
Sbjct: 309 VLEYLPN-PGEVENLAFVEKEGQDPEKIVLNPARDGKDAFVGLAFKLEAGRFGQLTYLRC 367
Query: 345 SKQKLHKTENMFNDINKEKVK 365
+ L K +N+FN +KV+
Sbjct: 368 YQGVLRKGDNIFNARTNKKVR 388
Score = 44 (20.5 bits), Expect = 2.6e-12, Sum P(5) = 2.6e-12
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 45 IGISAHIDSGKTTLTERI 62
Score = 43 (20.2 bits), Expect = 1.5e-23, Sum P(4) = 1.5e-23
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +A+L+Y+P
Sbjct: 288 FTPVLVGTALKN-KGVQ----PLLDAVLEYLP 314
Score = 41 (19.5 bits), Expect = 1.5e-06, Sum P(5) = 1.5e-06
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 624 PILNFFYDNSIENAMM 639
P +FF+DN ++ ++
Sbjct: 472 PTFHFFFDNDVKETLV 487
>ASPGD|ASPL0000042106 [details] [associations]
symbol:AN10315 species:162425 "Emericella nidulans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0005761 "mitochondrial ribosome"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0045727 "positive
regulation of translation" evidence=IEA] HAMAP:MF_00071
InterPro:IPR000795 InterPro:IPR005225 InterPro:IPR006297
Pfam:PF00009 PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743
GO:GO:0006412 EMBL:BN001307 GO:GO:0003924 GO:GO:0006184
GO:GO:0043022 GO:GO:0045727 EMBL:AACD01000042 Gene3D:3.30.70.240
GO:GO:0005761 InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022
SUPFAM:SSF54980 eggNOG:COG0481 HOGENOM:HOG000020624
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 OMA:KCYGGDA RefSeq:XP_660116.1
ProteinModelPortal:C8VPJ1 EnsemblFungi:CADANIAT00009237
GeneID:2874683 KEGG:ani:AN2512.2 KO:K03018 OrthoDB:EOG4X3M8C
Uniprot:C8VPJ1
Length = 662
Score = 258 (95.9 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 56/144 (38%), Positives = 86/144 (59%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN--G 984
I+AHVDHGK+TL D LL +GT + +N +++D ++E+ERGIT+ ++ C++ YN G
Sbjct: 71 IVAHVDHGKSTLSDRLLELTGTIKPG--MNKQVLDKLDVERERGITVKAQTCTMIYNHKG 128
Query: 985 TR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
++++DTPGH DF EV R + LLL+DA +G QT A G + I
Sbjct: 129 EDYLLHLVDTPGHVDFRAEVSRSYASCGGALLLVDASQGIQAQTVANFYLAFSQGLELIP 188
Query: 1043 VVNKIDRSNARPEWVVDATFDLFD 1066
V+NK+D +A PE ++ F+
Sbjct: 189 VINKVDLPSAEPERALEQLEQSFE 212
Score = 148 (57.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 54/186 (29%), Positives = 85/186 (45%)
Query: 101 GITQHIGAYNVVTNHGSITFL----DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQ 156
GIT ++ NH +L DTPGH F A +R +L+V A G+ Q
Sbjct: 112 GITVKAQTCTMIYNHKGEDYLLHLVDTPGHVDFRAEVSRSYASCGGALLLVDASQGIQAQ 171
Query: 157 TREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTG 216
T A G+ LI INK+D +R + L EQ + A + +SAKTG
Sbjct: 172 TVANFYLAFSQGLELIPVINKVDLPSAEPERALEQL--EQSFELDTEDA---VLVSAKTG 226
Query: 217 VGINKLLENI--SLQAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDI 274
+ + +LL + + A I + K P+ + ++++S D KG + V + G +R
Sbjct: 227 LNVEQLLPTVVEKIPAPIGDCKRPL----RMLLVDSWYDSYKGVICLVRVFDGEVRAGQQ 282
Query: 275 VVAGAS 280
VV+ A+
Sbjct: 283 VVSFAT 288
Score = 103 (41.3 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 86/456 (18%), Positives = 185/456 (40%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G N+ L +++ +P + PL++ ++ Y SY G I + R+ G +++ Q
Sbjct: 223 AKTGLNVEQLLPTVVEKIPAPIGDCKRPLRMLLVDSWYDSYKGVICLVRVFDGEVRAGQQ 282
Query: 1154 VV-IMNGPDDKPNKAKINQIRVFKGLD--RVLVNEALSGDIVLITGIE---EICIGSTIC 1207
VV G K + ++ + L+ + ++ G I G++ E IG T
Sbjct: 283 VVSFATGI-----KYYVGEVGIQYPLETPQTVLRAGQVGYIFFNPGMKRSKEAKIGDTFT 337
Query: 1208 DPSKPNGL-PMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVT 1266
+ P+ +EP + V P+ F +++ ++ + N+ + V
Sbjct: 338 TVGSEKAVQPLPGFEEPKAMV--FVAAYPVDADH--F---EHLEDSINQLVLNDRSITV- 389
Query: 1267 QNKHDDSI---YEVSGRGELHLTILIENMRRE-GYELSVSRP----RVIFKT------LN 1312
Q + +++ + + G LH ++ + +R+E G + ++ P +V++K N
Sbjct: 390 QKESSEALGAGFRLGFLGTLHCSVFEDRLRQEHGASIIITPPSVPVKVVWKDGKEDIITN 449
Query: 1313 GELYEPYENLFVDIEEINQGIIMQKLN----YRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
+ +++ + + E+ + +M L Y G ++ E N E+ LEY P++ ++
Sbjct: 450 PNRFPDEDDVRMKVAELQEPYVMATLTFPDEYLGTVIELCEANRGEQKSLEYFTPTQVIL 509
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQD 1428
++ + L + L+ F GK + G Y+ S WK +
Sbjct: 510 KYE---LPLAQ---LVDDFF--------------GKLKGGT--KGYASLDYEESGWKPSN 547
Query: 1429 RGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLE 1488
+L + N + + +H D L K ++ + IQ KI
Sbjct: 548 IVKLQLLVNKAPVDAVARLVHYSQTDRLGRQWVTKFKEHVDRQLFEIIIQAAVGKKIVAR 607
Query: 1489 YAIEFINDDELVEITPKNIRLRKRFL-KENERKKKL 1523
++ D L ++ ++ R++ L K+ E +K+L
Sbjct: 608 ETVKPYRKDVLAKLHASDVSRRRKLLEKQKEGRKRL 643
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 267 GTLRCSDIVVAGASYGRIRSMLNENGKNILEAGPSIPVEI 306
GTL CS R+R E+G +I+ PS+PV++
Sbjct: 407 GTLHCS------VFEDRLRQ---EHGASIIITPPSVPVKV 437
>TAIR|locus:2145708 [details] [associations]
symbol:AT5G14460 species:3702 "Arabidopsis thaliana"
[GO:0001522 "pseudouridine synthesis" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005215 "transporter activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0009451 "RNA modification"
evidence=IEA;ISS] [GO:0009982 "pseudouridine synthase activity"
evidence=IEA;TAS] [GO:0019288 "isopentenyl diphosphate biosynthetic
process, mevalonate-independent pathway" evidence=RCA]
HAMAP:MF_01080 InterPro:IPR002501 InterPro:IPR014780
InterPro:IPR020103 Pfam:PF01509 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003723 GO:GO:0006396
eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
UniGene:At.31932 UniGene:At.54843 KO:K03177 PANTHER:PTHR13767
TIGRFAMs:TIGR00431 EMBL:AK226674 IPI:IPI00542969 RefSeq:NP_196950.2
ProteinModelPortal:Q0WVR7 SMR:Q0WVR7 STRING:Q0WVR7 PaxDb:Q0WVR7
PRIDE:Q0WVR7 EnsemblPlants:AT5G14460.1 GeneID:831297
KEGG:ath:AT5G14460 TAIR:At5g14460 HOGENOM:HOG000006019
InParanoid:Q0WVR7 OMA:IWQVPPM PhylomeDB:Q0WVR7
ProtClustDB:CLSN2708543 Genevestigator:Q0WVR7 Uniprot:Q0WVR7
Length = 540
Score = 304 (112.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 76/195 (38%), Positives = 100/195 (51%)
Query: 665 VLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSEAD 724
VLL++KP G +S K++ L+ KKVG+ GTLDP ATGLL +C G+ATK +
Sbjct: 323 VLLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMI 382
Query: 725 KYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALKYK 784
K Y + LG T T D + +I + I+K L +F G+I Q+PPM+SA+K
Sbjct: 383 KGYSGVFRLGEATSTLDADSPVIQRESWEHIKDDDIKKALTSFLGEIWQVPPMFSAIKVG 442
Query: 785 GIPLYKYARSGXXXXXX--XXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVLSEDIGKM 842
G +Y+ AR G L R+ CSKGTYIR L D+ K
Sbjct: 443 GEKMYEKARRGETVELSPRRISIFQFDIERSLDDRQNLIFRVICSKGTYIRSLCADLAKA 502
Query: 843 LGCGAHLKYLRRIGI 857
LG AHL LRR I
Sbjct: 503 LGSCAHLTALRRDSI 517
>TIGR_CMR|CHY_0961 [details] [associations]
symbol:CHY_0961 "translation elongation factor G"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0005622
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 KO:K02355 TIGRFAMs:TIGR00484
HOGENOM:HOG000231587 RefSeq:YP_359808.1 ProteinModelPortal:Q3ADH6
STRING:Q3ADH6 GeneID:3727644 KEGG:chy:CHY_0961 PATRIC:21275055
OMA:KGLRECI BioCyc:CHYD246194:GJCN-960-MONOMER Uniprot:Q3ADH6
Length = 672
Score = 197 (74.4 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 52/164 (31%), Positives = 81/164 (49%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I AH GKT+L + LL +G ++ + + D + E +R +TI + E+N
Sbjct: 14 IFAHSGAGKTSLTEALLYNTGVLKRMGRVEDGNTVSDYHPEEIKRKVTIHASLVPCEWNN 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
++N IDTPG+ADF GEV+ +L +V+ + ++ A G QT V A G V +
Sbjct: 74 HKLNFIDTPGYADFIGEVKSVLKVVEGAIFVVCAASGVEIQTEVVWNLADNAGLPRFVFI 133
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGY 1088
NKI+R NA E ++ ++ L A L P+ GY
Sbjct: 134 NKIERENANFEKTLNQIREI---LSAKVVPLHLPIGEGENFKGY 174
Score = 150 (57.9 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 53/208 (25%), Positives = 91/208 (43%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
L +A + +P + N ++P+ +L Y+G+I ++L G +K + + N D
Sbjct: 266 LLDASCELLPPPQKNYDHPVAYVFKTLA-DPYVGRINFVKVLGGSLKP--ETTLYNFKKD 322
Query: 1163 KPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDE 1222
KP K I I +G D+V E +GDI + + E G + KP + ++
Sbjct: 323 KPEK--IGHILFMRGKDQVQSQEVNAGDIACLIKLSETGTGDVLSLKDKPVEIEPVDYPT 380
Query: 1223 PTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGE 1282
P +TI + + E + T D + L QN +SG GE
Sbjct: 381 PNMTIAILPKSK---NDEDRLSTALHRALEEDPTLSLEKNLETRQNL-------LSGMGE 430
Query: 1283 LHLTILIENMRRE-GYELSVSRPRVIFK 1309
LHL I++E ++R+ G E+ RV ++
Sbjct: 431 LHLEIVLEAIKRKYGVEVVTEELRVPYR 458
Score = 123 (48.4 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
++T L ++ MG V+ G T + DY + + +T H N+ +
Sbjct: 24 SLTEALLYNTGVLKRMGRVEDGNT-VSDY--HPEEIKRK---VTIHASLVPCEWNNHKLN 77
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
F+DTPG+ F KV + + VV A GV QT A +G+P V INKI+
Sbjct: 78 FIDTPGYADFIGEVKSVLKVVEGAIFVVCAASGVEIQTEVVWNLADNAGLPRFVFINKIE 137
Query: 180 KLDINLDR-IKQ--DLISEQVIP 199
+ + N ++ + Q +++S +V+P
Sbjct: 138 RENANFEKTLNQIREILSAKVVP 160
Score = 76 (31.8 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 49/224 (21%), Positives = 100/224 (44%)
Query: 1284 HLTI-LIENMRREGYELSVSRPRVIFK--TLNGEL-YEPYENLFVDIEEINQGIIMQKLN 1339
++TI ++ + + LS + R + + TL+ E E +NL + E++ I+++ +
Sbjct: 382 NMTIAILPKSKNDEDRLSTALHRALEEDPTLSLEKNLETRQNLLSGMGELHLEIVLEAIK 441
Query: 1340 YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
+ G +E+ +E +R+ YR R + + ++ T G G HV+ P +K +
Sbjct: 442 RKYG----VEVVTEE-LRVPYRETIRKTVQVEGKYKKQTGGRGQYGHVWLRLEPLPDK-E 495
Query: 1400 YDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL----FINHNDLVYEGMIIGIHSRDNDL 1455
++ G+ G + + AV + + + G L +N ++Y+G H D+
Sbjct: 496 FEFGEEIFGGAVPKQYFPAVEKGIREALNEGVLAGYKVMNVRAVLYDG---SYHPVDSSE 552
Query: 1456 LVNPIKEKQLTNIRSSGSDEAIQ-LISPIKITLEYAI--EFIND 1496
L I Q G EA L+ P+ + +E + +F+ D
Sbjct: 553 LAFKIAASQAFK---KGVKEANPVLLEPVML-VEVTVPEQFMGD 592
Score = 62 (26.9 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 20/99 (20%), Positives = 42/99 (42%)
Query: 1309 KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
K N L EP + V + E G ++ N + G + +E + R++ +P ++
Sbjct: 568 KEANPVLLEPVMLVEVTVPEQFMGDVISDFNGKRGHVLGME-TQGRWARVKAYVPYAEML 626
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRN 1407
+ + +T+ G + F Y K + ++ K+ N
Sbjct: 627 KYNIDLKAMTQARGFYTMTFSHYQEVPPKLQEEIIKKAN 665
Score = 43 (20.2 bits), Expect = 2.5e-15, Sum P(4) = 2.5e-15
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 454 KEIKS-EITNL-IPLEKKENLLGLAEIRQVILVNKVSKIAGCYILEGLIRRDSKIRIL 509
+EI S ++ L +P+ + EN G ++ L NK G + EG I + + R+L
Sbjct: 151 REILSAKVVPLHLPIGEGENFKGYIDV----LKNKAYFFDGTNLTEGAIPAEYEERVL 204
Score = 37 (18.1 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 587 FTTFNKDISIKNILDNLSKAKNYIRFKLSKKL-HIHTLPI 625
F NK I +N N K N IR LS K+ +H LPI
Sbjct: 130 FVFINK-IERENA--NFEKTLNQIREILSAKVVPLH-LPI 165
>UNIPROTKB|B4JQM7 [details] [associations]
symbol:ico "Elongation factor G, mitochondrial"
species:7222 "Drosophila grimshawi" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 EMBL:CH916372
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 KO:K02355 TIGRFAMs:TIGR00484 OMA:QEPGKGY
OrthoDB:EOG40CFXZ GO:GO:0070125 RefSeq:XP_001993282.1 STRING:B4JQM7
EnsemblMetazoa:FBtr0148569 GeneID:6567084 KEGG:dgr:Dgri_GH13155
FlyBase:FBgn0120632 InParanoid:B4JQM7 Uniprot:B4JQM7
Length = 747
Score = 239 (89.2 bits), Expect = 3.9e-23, Sum P(4) = 3.9e-23
Identities = 57/138 (41%), Positives = 78/138 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 49 ISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 107
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 108 MWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 167
Query: 1041 IVVVNKIDRSNARPEWVV 1058
+ +NK+DR + P V+
Sbjct: 168 LAFINKLDRLGSNPNRVL 185
Score = 133 (51.9 bits), Expect = 5.9e-13, Sum P(5) = 5.9e-13
Identities = 35/95 (36%), Positives = 46/95 (48%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 97 GITIQSAATYTMWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 156
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D+L N +R+ L S+
Sbjct: 157 NRQMKRYNVPCLAFINKLDRLGSNPNRVLSQLRSK 191
Score = 101 (40.6 bits), Expect = 3.9e-23, Sum P(4) = 3.9e-23
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T K N + + + EP +++ NN+
Sbjct: 405 VNEVFAGDIFALFGVD--CASGDTFTTNPKNNMAMESIFVPEPVVSMAIKPNNTKDRDNF 462
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I ++ H +N ++ T VSG GELHL I + M RE G +
Sbjct: 463 SKAIARFTKEDPTFHFYFDN-DVKETL---------VSGMGELHLEIYAQRMEREYGCPV 512
Query: 1300 SVSRPRVIFK-TLNG 1313
++ +P+V F+ TL G
Sbjct: 513 TLGKPKVAFRETLVG 527
Score = 71 (30.1 bits), Expect = 3.9e-23, Sum P(4) = 3.9e-23
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 633 VFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 691
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ +E + T+G G + + Y+P
Sbjct: 692 MFGYASELRSSTQGKGEFTMEYSRYSP 718
Score = 48 (22.0 bits), Expect = 5.9e-13, Sum P(5) = 5.9e-13
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 64 ESLVRAPIVTIMGHVDHGKTSLLDYI 89
+S+ R + I H+D GKT+L + I
Sbjct: 39 KSIERIRNIGISAHIDSGKTTLTERI 64
Score = 47 (21.6 bits), Expect = 1.1e-20, Sum P(4) = 1.1e-20
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ +R G+L SG ++ ++LQD G
Sbjct: 564 EFVDETVGT----NVPKQFVPGVEKGYREMCER--GML----SGHKLSGIRFRLQDGGHH 613
Query: 1433 FINHNDLVY----EGMIIGIHSRDNDLLVNPIKEKQLT 1466
++ ++L + G I + + ++ PI ++T
Sbjct: 614 IVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVT 651
Score = 46 (21.3 bits), Expect = 5.9e-13, Sum P(5) = 5.9e-13
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 295 ILEAGPSIPVEIQGLTKVPFSGEELF-VILN---EKKAREIGL-FR--QGKFRDV---KL 344
I++ P+ P E++ L + G+E ++LN + K +GL F+ G+F + +
Sbjct: 311 IIDYLPN-PGEVENLAYIEHEGKEKQQIVLNPARDGKDPFMGLAFKLEAGRFGQLTYLRC 369
Query: 345 SKQKLHKTENMFNDINKEKVK 365
+ L K +N+FN +KV+
Sbjct: 370 YQGVLRKGDNIFNARTNKKVR 390
Score = 41 (19.5 bits), Expect = 3.9e-23, Sum P(4) = 3.9e-23
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGK 1137
+T L G A +N K Q PL +AI+ Y+P NP +++ +L Y + GK
Sbjct: 290 FTPVLVGTALKN-KGVQ----PLLDAIIDYLP-------NPGEVE--NLAYIEHEGK 332
Score = 38 (18.4 bits), Expect = 7.1e-07, Sum P(5) = 7.1e-07
Identities = 4/16 (25%), Positives = 11/16 (68%)
Query: 624 PILNFFYDNSIENAMM 639
P +F++DN ++ ++
Sbjct: 474 PTFHFYFDNDVKETLV 489
>UNIPROTKB|A6QLJ3 [details] [associations]
symbol:GUF1 "Translation factor GUF1, mitochondrial"
species:9913 "Bos taurus" [GO:0005743 "mitochondrial inner
membrane" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0481 HOGENOM:HOG000020624 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393
EMBL:BC147985 IPI:IPI00866884 RefSeq:NP_001095537.1
UniGene:Bt.103039 ProteinModelPortal:A6QLJ3 STRING:A6QLJ3
PRIDE:A6QLJ3 Ensembl:ENSBTAT00000000356 GeneID:522459
KEGG:bta:522459 CTD:60558 GeneTree:ENSGT00550000074940
HOVERGEN:HBG081580 InParanoid:A6QLJ3 OMA:KCYGGDA OrthoDB:EOG43JC4B
NextBio:20873534 Uniprot:A6QLJ3
Length = 669
Score = 283 (104.7 bits), Expect = 4.2e-23, Sum P(3) = 4.2e-23
Identities = 66/146 (45%), Positives = 90/146 (61%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
+IIAHVDHGK+TL D LL +G K +N N +++D ++E+ERGIT+ ++ S+ YN
Sbjct: 72 SIIAHVDHGKSTLADRLLELTGAIDKTKN-NKQVLDKLQVERERGITVKAQTASLFYNYE 130
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G + +N+IDTPGH DF EV R LS VLL++DA EG QT A + I
Sbjct: 131 GKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSII 190
Query: 1042 VVVNKIDRSNARPEWV---VDATFDL 1064
V+NKID NA PE V ++ FD+
Sbjct: 191 PVINKIDLKNADPERVEKQIEKVFDI 216
Score = 152 (58.6 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 46/169 (27%), Positives = 82/169 (48%)
Query: 109 YNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISG 168
YN + +DTPGH F+ +R V+LVV A++G+ QT A +
Sbjct: 127 YNYEGKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQ 186
Query: 169 VPLIVAINKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISL 228
+ +I INKID + + +R+++ + E+V + G I ISAK G + +L+ +
Sbjct: 187 LSIIPVINKIDLKNADPERVEKQI--EKVF--DIPG-DECIKISAKLGTNVESVLDAVIK 241
Query: 229 QAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVA 277
+ KA P + ++ +S D+ +G +A V + G + D +V+
Sbjct: 242 RIPFP--KAHCRNPLRALVFDSTFDQYRGVIANVALFDGVVSKGDKIVS 288
Score = 72 (30.4 bits), Expect = 4.2e-23, Sum P(3) = 4.2e-23
Identities = 30/135 (22%), Positives = 63/135 (46%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G N+ + +A++K +P K + NPL+ + + Y G I + G + S D
Sbjct: 226 AKLGTNVESVLDAVIKRIPFPKAHCRNPLRALVFDSTFDQYRGVIANVALFDG-VVSKGD 284
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDP 1209
++ + K + +N++ V ++ ++ +G + LI G++++ IG T+
Sbjct: 285 KIV-SAHTQKTYE--VNEVGVLNPNEQP-THKLYAGQVGYLIAGMKDVTEAQIGDTLYLH 340
Query: 1210 SKP-NGLPMLNIDEP 1223
+P LP +P
Sbjct: 341 KQPVEPLPGFKSAKP 355
Score = 54 (24.1 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ HVDHGK++L D
Sbjct: 72 SIIAHVDHGKSTLAD 86
Score = 47 (21.6 bits), Expect = 4.2e-23, Sum P(3) = 4.2e-23
Identities = 34/144 (23%), Positives = 60/144 (41%)
Query: 1288 LIENMRREGYELSVSRPRVI-FKTLNGELYEPYE-NLFVDIEEINQGIIMQKLNYRGGDL 1345
LI+ R + E+++ P K+ E EP + +E G IM R
Sbjct: 443 LIKEYREK--EITIINPAQFPDKSKVTEYLEPVVLGTIITPDEYT-GKIMMLCQARRAVQ 499
Query: 1346 KNIEINEKERVRLEYRIPSRGLI-GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
KN+ ++ RV L+Y P ++ F + +L+ +G S +E+ A + +
Sbjct: 500 KNMMYIDQNRVMLKYLFPLNEIVVDFYDSLKSLS--SGYASFDYED-AGYQTAELVKMDI 556
Query: 1405 RRNGVLISQYSG---KAVAYSLWK 1425
NG ++ + K AYS+ K
Sbjct: 557 LLNGSIVEELVTVVHKDKAYSVGK 580
>MGI|MGI:2140726 [details] [associations]
symbol:Guf1 "GUF1 GTPase homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
MGI:MGI:2140726 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005743 GO:GO:0006412 GO:GO:0003924 GO:GO:0006184
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 HSSP:P32324
eggNOG:COG0481 HOGENOM:HOG000020624 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393 CTD:60558
GeneTree:ENSGT00550000074940 HOVERGEN:HBG081580 OMA:KCYGGDA
OrthoDB:EOG43JC4B ChiTaRS:GUF1 EMBL:AK053420 EMBL:AK084627
EMBL:BC057962 IPI:IPI00225294 IPI:IPI00336569 RefSeq:NP_766299.1
UniGene:Mm.21105 ProteinModelPortal:Q8C3X4 SMR:Q8C3X4 STRING:Q8C3X4
PhosphoSite:Q8C3X4 PaxDb:Q8C3X4 PRIDE:Q8C3X4
Ensembl:ENSMUST00000031113 Ensembl:ENSMUST00000087228 GeneID:231279
KEGG:mmu:231279 UCSC:uc008xqm.1 UCSC:uc008xqn.1 InParanoid:Q8C3X4
NextBio:380480 Bgee:Q8C3X4 CleanEx:MM_GUF1 Genevestigator:Q8C3X4
GermOnline:ENSMUSG00000029208 Uniprot:Q8C3X4
Length = 651
Score = 281 (104.0 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 66/151 (43%), Positives = 92/151 (60%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
+IIAHVDHGK+TL D LL +GT K + N +++D ++E+ERGIT+ ++ S+ Y+
Sbjct: 54 SIIAHVDHGKSTLADRLLELTGTIDKTKK-NKQVLDKLQVERERGITVKAQTASLFYSFG 112
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G + +N+IDTPGH DF EV R LS VLL++DA EG QT A + I
Sbjct: 113 GKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVI 172
Query: 1042 VVVNKIDRSNARPEWV---VDATFDLFDKLC 1069
V+NKID NA PE V ++ FD+ + C
Sbjct: 173 PVINKIDLKNADPERVGKQIEKVFDIPSEEC 203
Score = 148 (57.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 44/160 (27%), Positives = 77/160 (48%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R V+LVV A++G+ QT A + + +I INK
Sbjct: 118 LNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVIPVINK 177
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + + +R+ + + IP E I ISAK G ++ +L+ + I K
Sbjct: 178 IDLKNADPERVGKQIEKVFDIPSE-----ECIKISAKLGTNVDSVLQAVI--ERIPPPKV 230
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVA 277
P K ++ +S D+ +G +A + + G + D +V+
Sbjct: 231 HRENPLKALVFDSTFDQYRGVIANIALFDGVVSKGDKIVS 270
Score = 66 (28.3 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 90/455 (19%), Positives = 182/455 (40%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G N+ + +A+++ +P K + NPL+ + + Y G I + G + S D
Sbjct: 208 AKLGTNVDSVLQAVIERIPPPKVHRENPLKALVFDSTFDQYRGVIANIALFDG-VVSKGD 266
Query: 1154 VVIMNGPDDKPNKA-KINQIRVFKGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICD 1208
++ KA ++N++ + ++ ++ +G + LI G++++ IG T+
Sbjct: 267 KIV----SAHTKKAYEVNEVGILNPNEQP-THKLYAGQVGFLIAGMKDVTEAQIGDTLYL 321
Query: 1209 PSKP-NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQ 1267
+ P LP +P + P+ E +K+ ++ N+ + V +
Sbjct: 322 HNHPVEPLPGFKSAKPMVFAGVY----PIDQSE-----YNNLKSAIEKLTLNDSSVTVHR 372
Query: 1268 NKHDDSI-----YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTL--NGELYEP 1318
D S+ + + G LH+ + + + +E Y SV + P V +K + + +L +
Sbjct: 373 ---DSSLALGAGWRLGFLGLLHMEVFNQRLEQE-YNASVILTTPTVPYKAVLSSAKLIKE 428
Query: 1319 YENLFVDIEEINQGIIMQK---LNYRGGDLKNIEINEKERV-RLEYRIPSRGLIGFQNEF 1374
Y+ + I IN +K Y + I E ++ +R I F
Sbjct: 429 YKEKEITI--INPAQFPEKSQVTEYLEPVVLGTVITPTEYTGKIMALCQARRAIQKNMTF 486
Query: 1375 ITLTRGTGLISHVF---EEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGR 1431
I R ++ ++F E FY+ K L +G Y Y +L
Sbjct: 487 IDENRV--MLKYLFPLNEIVVDFYDSLK-SLS---SGYASFDYED--AGYQTAELVKMD- 537
Query: 1432 LFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAI 1491
+ +N N + E ++ +H + I E+ ++ + AIQ K+ +
Sbjct: 538 ILLNGN--MVEELVTVVHREKAYTVGKSICERLKESLPRQLYEIAIQAAVGSKVIARETV 595
Query: 1492 EFINDDELVEITPKNIRLRKRFLK-ENERKKKLHK 1525
+ + L + +I + + LK ++E KKKL K
Sbjct: 596 KAYRKNVLAKCYGGDITRKMKLLKRQSEGKKKLRK 630
Score = 54 (24.1 bits), Expect = 4.5e-23, Sum P(3) = 4.5e-23
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ HVDHGK++L D
Sbjct: 54 SIIAHVDHGKSTLAD 68
>UNIPROTKB|Q7Q1K8 [details] [associations]
symbol:AGAP009737 "Elongation factor G, mitochondrial"
species:7165 "Anopheles gambiae" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 EMBL:AAAB01008980 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484
OrthoDB:EOG40CFXZ GO:GO:0070125 RefSeq:XP_318822.4 HSSP:P13551
ProteinModelPortal:Q7Q1K8 STRING:Q7Q1K8
EnsemblMetazoa:AGAP009737-RA GeneID:1279146
KEGG:aga:AgaP_AGAP009737 VectorBase:AGAP009737 CTD:1279146
OMA:FMGSAYK PhylomeDB:Q7Q1K8 Uniprot:Q7Q1K8
Length = 744
Score = 236 (88.1 bits), Expect = 6.6e-23, Sum P(6) = 6.6e-23
Identities = 53/133 (39%), Positives = 76/133 (57%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G ++ + + MDS E+E++RGITI S
Sbjct: 46 ISAHIDSGKTTLTERILFYTGRIKEMHEVKGKDNVGATMDSMELERQRGITIQSAATYTI 105
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ +V G QT V R+ + +
Sbjct: 106 WKDHNINIIDTPGHVDFTVEVERALRVLDGAVLVLCSVGGVQSQTLTVNRQMKRYNVPCL 165
Query: 1042 VVVNKIDRSNARP 1054
+NK+DRS A P
Sbjct: 166 AFINKLDRSGANP 178
Score = 126 (49.4 bits), Expect = 1.5e-11, Sum P(6) = 1.5e-11
Identities = 33/89 (37%), Positives = 44/89 (49%)
Query: 101 GIT-QHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTRE 159
GIT Q Y + +H +I +DTPGH FT R +V D VLV+ + GV QT
Sbjct: 94 GITIQSAATYTIWKDH-NINIIDTPGHVDFTVEVERALRVLDGAVLVLCSVGGVQSQTLT 152
Query: 160 AIAHAKISGVPLIVAINKIDKLDINLDRI 188
K VP + INK+D+ N R+
Sbjct: 153 VNRQMKRYNVPCLAFINKLDRSGANPYRV 181
Score = 90 (36.7 bits), Expect = 6.6e-23, Sum P(6) = 6.6e-23
Identities = 37/135 (27%), Positives = 61/135 (45%)
Query: 1183 VNEALSGDIVLITGIEEICI-GST-ICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T + +P + + + +P +++ NS
Sbjct: 402 VNEVYAGDIFALFGVD--CASGDTFVTNPKLELSMESIFVPDPVVSMAIKPTNSKDRDNF 459
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I R K + + ++ T VSG GELHL I + M RE +
Sbjct: 460 AKAIA-RFTKEDPTFHFEYDADVKETL---------VSGMGELHLEIYAQRMEREYNCPV 509
Query: 1300 SVSRPRVIFK-TLNG 1313
++ +P+V F+ TL G
Sbjct: 510 TLGKPKVAFRETLIG 524
Score = 76 (31.8 bits), Expect = 6.6e-23, Sum P(6) = 6.6e-23
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG ++ +LN R G + E + + +P
Sbjct: 630 VFENGSWQILEPIMMVEVTAPEEFQGTVIGQLNKRHGIITGTE-GAEGWFTVYAEVPLND 688
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G S + Y+P
Sbjct: 689 MFGYAGELRSSTQGKGEFSMEYSRYSP 715
Score = 47 (21.6 bits), Expect = 6.6e-23, Sum P(6) = 6.6e-23
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 50 ESFLLN--EYNKNIT-AE--SLVRAPIVTIMGHVDHGKTSLLDYI 89
+SFL N ++ + T AE L + + I H+D GKT+L + I
Sbjct: 17 KSFLENVKSFSSHATFAEHKQLEKIRNIGISAHIDSGKTTLTERI 61
Score = 46 (21.3 bits), Expect = 1.5e-11, Sum P(6) = 1.5e-11
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 1029 VTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFD 1063
+ R LK F P++V + +P ++DA D
Sbjct: 278 IRRSTLKRAFTPVLVGTALKNKGVQP--LLDAVLD 310
Score = 42 (19.8 bits), Expect = 6.6e-23, Sum P(6) = 6.6e-23
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNN 1120
+T L G A +N K Q PL +A+L Y+P H N
Sbjct: 287 FTPVLVGTALKN-KGVQ----PLLDAVLDYLP-HPGEVEN 320
Score = 42 (19.8 bits), Expect = 3.7e-11, Sum P(5) = 3.7e-11
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 311 KVPFS----GEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVK 365
KVP + G++ FV L K E G F G+ ++ + L K +N+FN + +K++
Sbjct: 333 KVPLNPARDGKDPFVGLAFKL--EAGRF--GQLTYLRCYQGVLRKGDNIFNTRSGKKIR 387
Score = 39 (18.8 bits), Expect = 6.6e-23, Sum P(6) = 6.6e-23
Identities = 6/23 (26%), Positives = 14/23 (60%)
Query: 1151 LQDVVIMNGPDDKPNKAKINQIR 1173
+++V ++ D++P K +N R
Sbjct: 318 VENVALVEKKDEEPQKVPLNPAR 340
>TIGR_CMR|CJE_1174 [details] [associations]
symbol:CJE_1174 "GTP-binding protein LepA" species:195099
"Campylobacter jejuni RM1221" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:YP_179165.1 ProteinModelPortal:Q5HU70
STRING:Q5HU70 GeneID:3231683 KEGG:cjr:CJE1174 PATRIC:20044141
BioCyc:CJEJ195099:GJC0-1201-MONOMER Uniprot:Q5HU70
Length = 598
Score = 255 (94.8 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 58/136 (42%), Positives = 85/136 (62%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--N 983
+IIAH+DHGK+TL D ++ + G Q +++++MD+ +IEKERGITI +++ + Y N
Sbjct: 10 SIIAHIDHGKSTLADRIISECGAISDRQ-MSSQVMDTMDIEKERGITIKAQSVRLNYKFN 68
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+N+IDTPGH DF EV R L+ + LL++DA +G QT AL+ + I
Sbjct: 69 NENFVLNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEII 128
Query: 1042 VVVNKIDRSNARPEWV 1057
V+NKID NA E V
Sbjct: 129 PVINKIDLPNADVEKV 144
Score = 184 (69.8 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 76/263 (28%), Positives = 133/263 (50%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R + +LVV A GV QT + A + + +I INK
Sbjct: 74 LNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINK 133
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + +++++K ++ E +I + A I +SAKTGVGI +L+E I I ++ A
Sbjct: 134 IDLPNADVEKVKHEI--EHIIGIDCKDA---ICVSAKTGVGIKELIETI-----ITKIPA 183
Query: 238 PVT---TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGR--IRSM----- 287
P T P K +I +S D G +A V I G++ +D V+ ++ + ++ +
Sbjct: 184 PKTDDEAPTKALIYDSWFDNYLGALALVRIYEGSIAKNDEVLVMSTDKKHIVQDLFYPHP 243
Query: 288 LNENGKNILEAGPSIPVEIQGLTKVPFS--GEELFVILNEKKARE-IGLFRQGK-FRDVK 343
L+ L++G + V + GL V G+ + ++ N KA+E IG F + K F
Sbjct: 244 LSPIKTQSLQSG-EVGVVVLGLKTVGDVQVGDTITLVKN--KAKEAIGGFEKAKAFVFAG 300
Query: 344 LSKQKLHKTENMFNDINKEKVKN 366
L + K E++ + ++K K+ +
Sbjct: 301 LYPIETDKFEDLRDALDKLKLND 323
Score = 97 (39.2 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 67/295 (22%), Positives = 127/295 (43%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
L E I+ +P K + P + I + +YLG + + RI G I +V++M+ D
Sbjct: 173 LIETIITKIPAPKTDDEAPTKALIYDSWFDNYLGALALVRIYEGSIAKNDEVLVMS--TD 230
Query: 1163 KPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIE---EICIGSTICDPSKPNGLPML 1218
K K + + L + SG++ V++ G++ ++ +G TI K +
Sbjct: 231 K--KHIVQDLFYPHPLSPIKTQSLQSGEVGVVVLGLKTVGDVQVGDTIT-LVKNKAKEAI 287
Query: 1219 NIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSI---Y 1275
E F P+ KF +++ LD ++K N + + ++ +
Sbjct: 288 GGFEKAKAFVF-AGLYPI--ETDKF---EDLRDALD-KLKLNDSSITYEPETSLALGFGF 340
Query: 1276 EVSGRGELHLTILIENMRRE-GYELSVSRPRV---IFKTLNGE---LYEPYENLFVD-IE 1327
V G LH+ ++ E + RE +L + P V I++T +GE + P E V+ I+
Sbjct: 341 RVGFLGLLHMEVIKERLEREFNLDLIATAPTVTYEIYQT-DGEFIKIQNPSELPPVNKID 399
Query: 1328 EINQGIIMQKLNYRGGDLKNIE--INEKE--RVRLEYRIPSRGLIGFQ---NEFI 1375
I + + + L N+ +N K +V+++Y P R L+ + NE +
Sbjct: 400 HIKEPYVKATIITPSEFLGNLITLLNRKRGVQVKMDYITPERVLLEYDVPLNEIV 454
Score = 56 (24.8 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 73 TIMGHVDHGKTSLLDYIRKTNVVFSEAGGIT 103
+I+ H+DHGK++L D I SE G I+
Sbjct: 10 SIIAHIDHGKSTLADRI------ISECGAIS 34
Score = 41 (19.5 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 1425 KLQDRGRLF-INHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPI 1483
K+Q+ L +N D + E + ++ L N I L N R G + I+P
Sbjct: 385 KIQNPSELPPVNKIDHIKEPYVKATIITPSEFLGNLIT---LLN-RKRGVQVKMDYITPE 440
Query: 1484 KITLEYAI---EFIND--DELVEIT 1503
++ LEY + E + D D+L +T
Sbjct: 441 RVLLEYDVPLNEIVMDFYDKLKSLT 465
>FB|FBgn0263133 [details] [associations]
symbol:ico "iconoclast" species:7227 "Drosophila
melanogaster" [GO:0003746 "translation elongation factor activity"
evidence=ISS;NAS] [GO:0006414 "translational elongation"
evidence=ISS;NAS] [GO:0005739 "mitochondrion" evidence=ISS;IDA;NAS]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
UniPathway:UPA00345 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005634 EMBL:AE014134
GO:GO:0003924 GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 KO:K02355 TIGRFAMs:TIGR00484
OMA:QEPGKGY OrthoDB:EOG40CFXZ GO:GO:0070125
GeneTree:ENSGT00550000074911 EMBL:BT023763 RefSeq:NP_609105.1
UniGene:Dm.18257 ProteinModelPortal:Q9VM33 SMR:Q9VM33 STRING:Q9VM33
PaxDb:Q9VM33 EnsemblMetazoa:FBtr0079413 GeneID:34004
KEGG:dme:Dmel_CG4567 UCSC:CG4567-RA CTD:34004 FlyBase:FBgn0263133
InParanoid:Q9VM33 PhylomeDB:Q9VM33 GenomeRNAi:34004 NextBio:786384
Bgee:Q9VM33 GermOnline:CG4567 Uniprot:Q9VM33
Length = 745
Score = 236 (88.1 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 56/134 (41%), Positives = 76/134 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 47 ISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 105
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 106 LWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 165
Query: 1041 IVVVNKIDRSNARP 1054
+ +NK+DR + P
Sbjct: 166 LAFINKLDRLGSNP 179
Score = 127 (49.8 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 95 GITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 154
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D+L N R+ + S+
Sbjct: 155 NRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSK 189
Score = 101 (40.6 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T K N + + + EP +++ NN+
Sbjct: 403 VNEVYAGDIFALFGVD--CASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNF 460
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I ++ H +N ++ T VSG GELHL I + M RE G +
Sbjct: 461 SKAIARFTKEDPTFHFFFDN-DVKETL---------VSGMGELHLEIYAQRMEREYGCPV 510
Query: 1300 SVSRPRVIFK-TLNG 1313
++ +P+V F+ TL G
Sbjct: 511 TLGKPKVAFRETLVG 525
Score = 70 (29.7 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 631 VFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 689
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G + + Y+P
Sbjct: 690 MFGYAGELRSSTQGKGEFTMEYSRYSP 716
Score = 47 (21.6 bits), Expect = 2.2e-20, Sum P(4) = 2.2e-20
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ ++ G+L SG ++ ++LQD G
Sbjct: 562 EFVDETVGT----NVPKQFVPGVEKGYREMAEK--GML----SGHKLSGIRFRLQDGGHH 611
Query: 1433 FINHNDLVY----EGMIIGIHSRDNDLLVNPIKEKQLT 1466
++ ++L + G I + + ++ PI ++T
Sbjct: 612 IVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVT 649
Score = 44 (20.5 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 45 IGISAHIDSGKTTLTERI 62
Score = 44 (20.5 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 16/81 (19%), Positives = 33/81 (40%)
Query: 333 LFRQGKFRDVKLSKQ-KLHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLST 391
+F + V++++ +LH N D+N+ ++ + D T NLS
Sbjct: 378 IFNARTNKKVRIARLVRLHS--NQMEDVNEVYAGDIFALFGVDCASGDTFTTNPKNNLSM 435
Query: 392 DKVKIQ--VIHNAVGNINESD 410
+ + + V+ A+ N D
Sbjct: 436 ESIFVPEPVVSMAIKPNNTKD 456
Score = 42 (19.8 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 295 ILEAGPSIPVEIQGLTKVPFSGEELF-VILN---EKKAREIGL-FR--QGKFRDV---KL 344
+L+ P+ P E++ L + G++ V+LN + K +GL F+ G+F + +
Sbjct: 309 VLDYLPN-PGEVENLGFIEKEGQDPEKVVLNPARDGKDPFVGLAFKLEAGRFGQLTYLRC 367
Query: 345 SKQKLHKTENMFNDINKEKVK 365
+ L K +N+FN +KV+
Sbjct: 368 YQGVLRKGDNIFNARTNKKVR 388
Score = 41 (19.5 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +A+L Y+P
Sbjct: 288 FTPVLVGTALKN-KGVQ----PLLDAVLDYLP 314
Score = 41 (19.5 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 624 PILNFFYDNSIENAMM 639
P +FF+DN ++ ++
Sbjct: 472 PTFHFFFDNDVKETLV 487
>UNIPROTKB|B4HY41 [details] [associations]
symbol:ico "Elongation factor G, mitochondrial"
species:7238 "Drosophila sechellia" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 KO:K02355
TIGRFAMs:TIGR00484 OrthoDB:EOG40CFXZ GO:GO:0070125 EMBL:CH480818
RefSeq:XP_002036048.1 EnsemblMetazoa:FBtr0196589 GeneID:6611507
KEGG:dse:Dsec_GM13604 FlyBase:FBgn0168535 Uniprot:B4HY41
Length = 745
Score = 236 (88.1 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 56/134 (41%), Positives = 76/134 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 47 ISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 105
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 106 LWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 165
Query: 1041 IVVVNKIDRSNARP 1054
+ +NK+DR + P
Sbjct: 166 LAFINKLDRLGSNP 179
Score = 127 (49.8 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 95 GITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 154
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D+L N R+ + S+
Sbjct: 155 NRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSK 189
Score = 101 (40.6 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T K N + + + EP +++ NN+
Sbjct: 403 VNEVYAGDIFALFGVD--CASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNF 460
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I ++ H +N ++ T VSG GELHL I + M RE G +
Sbjct: 461 SKAIARFTKEDPTFHFFFDN-DVKETL---------VSGMGELHLEIYAQRMEREYGCPV 510
Query: 1300 SVSRPRVIFK-TLNG 1313
++ +P+V F+ TL G
Sbjct: 511 TLGKPKVAFRETLVG 525
Score = 70 (29.7 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 631 VFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 689
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G + + Y+P
Sbjct: 690 MFGYAGELRSSTQGKGEFTMEYSRYSP 716
Score = 47 (21.6 bits), Expect = 2.2e-20, Sum P(4) = 2.2e-20
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ ++ G+L SG ++ ++LQD G
Sbjct: 562 EFVDETVGT----NVPKQFVPGVEKGYREMAEK--GML----SGHKLSGIRFRLQDGGHH 611
Query: 1433 FINHNDLVY----EGMIIGIHSRDNDLLVNPIKEKQLT 1466
++ ++L + G I + + ++ PI ++T
Sbjct: 612 IVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVT 649
Score = 44 (20.5 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 45 IGISAHIDSGKTTLTERI 62
Score = 44 (20.5 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 16/81 (19%), Positives = 33/81 (40%)
Query: 333 LFRQGKFRDVKLSKQ-KLHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLST 391
+F + V++++ +LH N D+N+ ++ + D T NLS
Sbjct: 378 IFNARTNKKVRIARLVRLHS--NQMEDVNEVYAGDIFALFGVDCASGDTFTTNPKNNLSM 435
Query: 392 DKVKIQ--VIHNAVGNINESD 410
+ + + V+ A+ N D
Sbjct: 436 ESIFVPEPVVSMAIKPNNTKD 456
Score = 42 (19.8 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 295 ILEAGPSIPVEIQGLTKVPFSGEELF-VILN---EKKAREIGL-FR--QGKFRDV---KL 344
+L+ P+ P E++ L + G++ V+LN + K +GL F+ G+F + +
Sbjct: 309 VLDYLPN-PGEVENLGFIEKEGQDPEKVVLNPARDGKDPFVGLAFKLEAGRFGQLTYLRC 367
Query: 345 SKQKLHKTENMFNDINKEKVK 365
+ L K +N+FN +KV+
Sbjct: 368 YQGVLRKGDNIFNARTNKKVR 388
Score = 41 (19.5 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +A+L Y+P
Sbjct: 288 FTPVLVGTALKN-KGVQ----PLLDAVLDYLP 314
Score = 41 (19.5 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 624 PILNFFYDNSIENAMM 639
P +FF+DN ++ ++
Sbjct: 472 PTFHFFFDNDVKETLV 487
>UNIPROTKB|B4NZM7 [details] [associations]
symbol:ico "Elongation factor G, mitochondrial"
species:7245 "Drosophila yakuba" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 EMBL:CM000157
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 KO:K02355 TIGRFAMs:TIGR00484 OrthoDB:EOG40CFXZ
GO:GO:0070125 RefSeq:XP_002088064.1 STRING:B4NZM7
EnsemblMetazoa:FBtr0264888 GeneID:6526968 KEGG:dya:Dyak_GE18370
FlyBase:FBgn0235790 Uniprot:B4NZM7
Length = 745
Score = 236 (88.1 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 56/134 (41%), Positives = 76/134 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 47 ISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 105
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 106 LWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 165
Query: 1041 IVVVNKIDRSNARP 1054
+ +NK+DR + P
Sbjct: 166 LAFINKLDRLGSNP 179
Score = 127 (49.8 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 95 GITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 154
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D+L N R+ + S+
Sbjct: 155 NRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSK 189
Score = 101 (40.6 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T K N + + + EP +++ NN+
Sbjct: 403 VNEVYAGDIFALFGVD--CASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNF 460
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I ++ H +N ++ T VSG GELHL I + M RE G +
Sbjct: 461 SKAIARFTKEDPTFHFFFDN-DVKETL---------VSGMGELHLEIYAQRMEREYGCPV 510
Query: 1300 SVSRPRVIFK-TLNG 1313
++ +P+V F+ TL G
Sbjct: 511 TLGKPKVAFRETLVG 525
Score = 70 (29.7 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 631 VFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 689
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G + + Y+P
Sbjct: 690 MFGYAGELRSSTQGKGEFTMEYSRYSP 716
Score = 47 (21.6 bits), Expect = 2.2e-20, Sum P(4) = 2.2e-20
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ ++ G+L SG ++ ++LQD G
Sbjct: 562 EFVDETVGT----NVPKQFVPGVEKGYREMAEK--GML----SGHKLSGIRFRLQDGGHH 611
Query: 1433 FINHNDLVY----EGMIIGIHSRDNDLLVNPIKEKQLT 1466
++ ++L + G I + + ++ PI ++T
Sbjct: 612 IVDSSELAFMLASHGAIKEVFQNGSWQILEPIMLVEVT 649
Score = 44 (20.5 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 45 IGISAHIDSGKTTLTERI 62
Score = 44 (20.5 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 16/81 (19%), Positives = 33/81 (40%)
Query: 333 LFRQGKFRDVKLSKQ-KLHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLST 391
+F + V++++ +LH N D+N+ ++ + D T NLS
Sbjct: 378 IFNARTNKKVRIARLVRLHS--NQMEDVNEVYAGDIFALFGVDCASGDTFTTNPKNNLSM 435
Query: 392 DKVKIQ--VIHNAVGNINESD 410
+ + + V+ A+ N D
Sbjct: 436 ESIFVPEPVVSMAIKPNNTKD 456
Score = 42 (19.8 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 295 ILEAGPSIPVEIQGLTKVPFSGEELF-VILN---EKKAREIGL-FR--QGKFRDV---KL 344
+L+ P+ P E++ L + G++ V+LN + K +GL F+ G+F + +
Sbjct: 309 VLDYLPN-PGEVENLGFIEKEGQDPEKVVLNPARDGKDPFVGLAFKLEAGRFGQLTYLRC 367
Query: 345 SKQKLHKTENMFNDINKEKVK 365
+ L K +N+FN +KV+
Sbjct: 368 YQGVLRKGDNIFNARTNKKVR 388
Score = 41 (19.5 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +A+L Y+P
Sbjct: 288 FTPVLVGTALKN-KGVQ----PLLDAVLDYLP 314
Score = 41 (19.5 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 624 PILNFFYDNSIENAMM 639
P +FF+DN ++ ++
Sbjct: 472 PTFHFFFDNDVKETLV 487
>UNIPROTKB|B4Q5D5 [details] [associations]
symbol:ico "Elongation factor G, mitochondrial"
species:7240 "Drosophila simulans" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:CM000361
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 KO:K02355
TIGRFAMs:TIGR00484 OrthoDB:EOG40CFXZ GO:GO:0070125
RefSeq:XP_002078483.1 EnsemblMetazoa:FBtr0222416 GeneID:6731327
KEGG:dsi:Dsim_GD22506 FlyBase:FBgn0193908 Uniprot:B4Q5D5
Length = 745
Score = 236 (88.1 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 56/134 (41%), Positives = 76/134 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 47 ISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 105
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 106 LWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 165
Query: 1041 IVVVNKIDRSNARP 1054
+ +NK+DR + P
Sbjct: 166 LAFINKLDRLGSNP 179
Score = 127 (49.8 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 95 GITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 154
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D+L N R+ + S+
Sbjct: 155 NRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSK 189
Score = 101 (40.6 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T K N + + + EP +++ NN+
Sbjct: 403 VNEVYAGDIFALFGVD--CASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNF 460
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I ++ H +N ++ T VSG GELHL I + M RE G +
Sbjct: 461 SKAIARFTKEDPTFHFFFDN-DVKETL---------VSGMGELHLEIYAQRMEREYGCPV 510
Query: 1300 SVSRPRVIFK-TLNG 1313
++ +P+V F+ TL G
Sbjct: 511 TLGKPKVAFRETLVG 525
Score = 70 (29.7 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 631 VFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 689
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G + + Y+P
Sbjct: 690 MFGYAGELRSSTQGKGEFTMEYSRYSP 716
Score = 47 (21.6 bits), Expect = 2.2e-20, Sum P(4) = 2.2e-20
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ ++ G+L SG ++ ++LQD G
Sbjct: 562 EFVDETVGT----NVPKQFVPGVEKGYREMAEK--GML----SGHKLSGIRFRLQDGGHH 611
Query: 1433 FINHNDLVY----EGMIIGIHSRDNDLLVNPIKEKQLT 1466
++ ++L + G I + + ++ PI ++T
Sbjct: 612 IVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVT 649
Score = 44 (20.5 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 45 IGISAHIDSGKTTLTERI 62
Score = 44 (20.5 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 16/81 (19%), Positives = 33/81 (40%)
Query: 333 LFRQGKFRDVKLSKQ-KLHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLST 391
+F + V++++ +LH N D+N+ ++ + D T NLS
Sbjct: 378 IFNARTNKKVRIARLVRLHS--NQMEDVNEVYAGDIFALFGVDCASGDTFTTNPKNNLSM 435
Query: 392 DKVKIQ--VIHNAVGNINESD 410
+ + + V+ A+ N D
Sbjct: 436 ESIFVPEPVVSMAIKPNNTKD 456
Score = 42 (19.8 bits), Expect = 1.9e-11, Sum P(5) = 1.9e-11
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 295 ILEAGPSIPVEIQGLTKVPFSGEELF-VILN---EKKAREIGL-FR--QGKFRDV---KL 344
+L+ P+ P E++ L + G++ V+LN + K +GL F+ G+F + +
Sbjct: 309 VLDYLPN-PGEVENLGFIEKEGQDPEKVVLNPARDGKDPFVGLAFKLEAGRFGQLTYLRC 367
Query: 345 SKQKLHKTENMFNDINKEKVK 365
+ L K +N+FN +KV+
Sbjct: 368 YQGVLRKGDNIFNARTNKKVR 388
Score = 41 (19.5 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +A+L Y+P
Sbjct: 288 FTPVLVGTALKN-KGVQ----PLLDAVLDYLP 314
Score = 41 (19.5 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 624 PILNFFYDNSIENAMM 639
P +FF+DN ++ ++
Sbjct: 472 PTFHFFFDNDVKETLV 487
>UNIPROTKB|B3N6A5 [details] [associations]
symbol:ico "Elongation factor G, mitochondrial"
species:7220 "Drosophila erecta" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 EMBL:CH954177
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
KO:K02355 TIGRFAMs:TIGR00484 OrthoDB:EOG40CFXZ GO:GO:0070125
RefSeq:XP_001970133.1 EnsemblMetazoa:FBtr0143598 GeneID:6542663
KEGG:der:Dere_GG23544 FlyBase:FBgn0115690 Uniprot:B3N6A5
Length = 745
Score = 236 (88.1 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 56/134 (41%), Positives = 76/134 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 47 ISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 105
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 106 LWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 165
Query: 1041 IVVVNKIDRSNARP 1054
+ +NK+DR + P
Sbjct: 166 LAFINKLDRLGSNP 179
Score = 127 (49.8 bits), Expect = 2.3e-11, Sum P(5) = 2.3e-11
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 95 GITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 154
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D+L N R+ + S+
Sbjct: 155 NRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSK 189
Score = 101 (40.6 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T K N + + + EP +++ NN+
Sbjct: 403 VNEVYAGDIFALFGVD--CASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNF 460
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I ++ H +N ++ T VSG GELHL I + M RE G +
Sbjct: 461 SKAIARFTKEDPTFHFFFDN-DVKETL---------VSGMGELHLEIYAQRMEREYGCPV 510
Query: 1300 SVSRPRVIFK-TLNG 1313
++ +P+V F+ TL G
Sbjct: 511 TLGKPKVAFRETLVG 525
Score = 70 (29.7 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 631 VFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 689
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G + + Y+P
Sbjct: 690 MFGYAGELRSSTQGKGEFTMEYSRYSP 716
Score = 47 (21.6 bits), Expect = 2.2e-20, Sum P(4) = 2.2e-20
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ ++ G+L SG ++ ++LQD G
Sbjct: 562 EFVDETVGT----NVPKQFVPGVEKGYREMAEK--GML----SGHKLSGIRFRLQDGGHH 611
Query: 1433 FINHNDLVY----EGMIIGIHSRDNDLLVNPIKEKQLT 1466
++ ++L + G I + + ++ PI ++T
Sbjct: 612 IVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVT 649
Score = 44 (20.5 bits), Expect = 2.3e-11, Sum P(5) = 2.3e-11
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 45 IGISAHIDSGKTTLTERI 62
Score = 44 (20.5 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 16/81 (19%), Positives = 33/81 (40%)
Query: 333 LFRQGKFRDVKLSKQ-KLHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLST 391
+F + V++++ +LH N D+N+ ++ + D T NLS
Sbjct: 378 IFNARTNKKVRIARLVRLHS--NQMEDVNEVYAGDIFALFGVDCASGDTFTTNPKNNLSM 435
Query: 392 DKVKIQ--VIHNAVGNINESD 410
+ + + V+ A+ N D
Sbjct: 436 ESIFVPEPVVSMAIKPNNTKD 456
Score = 41 (19.5 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +A+L Y+P
Sbjct: 288 FTPVLVGTALKN-KGVQ----PLLDAVLDYLP 314
Score = 41 (19.5 bits), Expect = 2.3e-11, Sum P(5) = 2.3e-11
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 316 GEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVK 365
G++ FV L K E G F G+ ++ + L K +N+FN +KV+
Sbjct: 343 GKDPFVGLAFKL--EAGRF--GQLTYLRCYQGVLRKGDNIFNARTNKKVR 388
Score = 41 (19.5 bits), Expect = 6.7e-06, Sum P(5) = 6.7e-06
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 624 PILNFFYDNSIENAMM 639
P +FF+DN ++ ++
Sbjct: 472 PTFHFFFDNDVKETLV 487
>UNIPROTKB|F1S3T1 [details] [associations]
symbol:GUF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924
GO:GO:0006184 Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393
GeneTree:ENSGT00550000074940 OMA:KCYGGDA EMBL:FP104561
Ensembl:ENSSSCT00000009637 Uniprot:F1S3T1
Length = 614
Score = 281 (104.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 66/151 (43%), Positives = 90/151 (59%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
+IIAHVDHGK+TL D L +G K +N N +++D ++E+ERGIT+ ++ S+ YN
Sbjct: 17 SIIAHVDHGKSTLADRFLELTGAIDKTKN-NKQVLDKLQVERERGITVKAQTASLFYNCE 75
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G + +N+IDTPGH DF EV R LS VLL++DA EG QT A + I
Sbjct: 76 GKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVI 135
Query: 1042 VVVNKIDRSNARPEWV---VDATFDLFDKLC 1069
V+NKID NA PE V ++ FD+ C
Sbjct: 136 PVINKIDLKNADPERVEKQIEKVFDIPSDEC 166
Score = 143 (55.4 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 45/169 (26%), Positives = 80/169 (47%)
Query: 109 YNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISG 168
YN + +DTPGH F+ +R V+LVV A++G+ QT A +
Sbjct: 72 YNCEGKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQ 131
Query: 169 VPLIVAINKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISL 228
+ +I INKID + + +R+++ + IP + I ISAK G + +L+ +
Sbjct: 132 LSVIPVINKIDLKNADPERVEKQIEKVFDIPSD-----ECIKISAKLGTNVESVLQAVIK 186
Query: 229 QAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVA 277
+ I KA + ++ +S D+ +G +A V + G + D +V+
Sbjct: 187 R--IPPPKAHRKNSLRALVFDSTYDQYRGVIANVALFDGVVSKGDKIVS 233
Score = 69 (29.3 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 51/247 (20%), Positives = 105/247 (42%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G N+ + +A++K +P K + N L+ + Y Y G I + G + S D
Sbjct: 171 AKLGTNVESVLQAVIKRIPPPKAHRKNSLRALVFDSTYDQYRGVIANVALFDG-VVSKGD 229
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDP 1209
++ + K + +N++ V ++ + +G + LI G++++ IG T+
Sbjct: 230 KIV-SAHTQKTYE--VNEVGVLNPNEQPAY-KLYAGQVGYLIAGMKDVTEAQIGDTLYLH 285
Query: 1210 SKP-NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQN 1268
+P LP +P + P+ E +KN ++ N+ + V +
Sbjct: 286 KQPVEPLPGFKSAKPMVFAGVY----PIDQSE-----YNNLKNAIEKLTLNDSSVTVHR- 335
Query: 1269 KHDDSI-----YEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTL--NGELYEPY 1319
D S+ + + G LH+ + + + +E Y SV + P V +K + + +L + Y
Sbjct: 336 --DSSLALGAGWRLGFLGLLHMEVFNQRLEQE-YNASVILTTPTVPYKAVLSSAKLIKEY 392
Query: 1320 ENLFVDI 1326
+ I
Sbjct: 393 REKEITI 399
Score = 56 (24.8 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 73 TIMGHVDHGKTSLLD-YIRKTNVV 95
+I+ HVDHGK++L D ++ T +
Sbjct: 17 SIIAHVDHGKSTLADRFLELTGAI 40
Score = 42 (19.8 bits), Expect = 7.6e-20, Sum P(2) = 7.6e-20
Identities = 34/144 (23%), Positives = 60/144 (41%)
Query: 1288 LIENMRREGYELSVSRPRVI-FKTLNGELYEPYE-NLFVDIEEINQGIIMQKLNYRGGDL 1345
LI+ R + E+++ P K+ E EP + +E IIM R
Sbjct: 388 LIKEYREK--EITIINPAQFPDKSKVTEYLEPIVLGTIITPDEYTGKIIML-CQARRAVQ 444
Query: 1346 KNIEINEKERVRLEYRIPSRGLI-GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGK 1404
KN+ ++ RV L+Y P ++ F + +L+ +G S +E+ A + +
Sbjct: 445 KNMMYIDQTRVMLKYLFPLNEIVVDFYDSLKSLS--SGYASFDYED-AGYQTAELVKMDI 501
Query: 1405 RRNGVLISQYSG---KAVAYSLWK 1425
NG ++ + K AYS+ K
Sbjct: 502 LLNGNIVEELVTVVHKDKAYSVGK 525
Score = 40 (19.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 1462 EKQLTNIRSSGSDEAIQLISPIKITLEYAIEFI 1494
EKQ+ + SDE I++ + + +E ++ +
Sbjct: 152 EKQIEKVFDIPSDECIKISAKLGTNVESVLQAV 184
>TIGR_CMR|CPS_0875 [details] [associations]
symbol:CPS_0875 "translation elongation factor G"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:CP000083
GenomeReviews:CP000083_GR Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 RefSeq:YP_267624.1
ProteinModelPortal:Q487Z1 STRING:Q487Z1 GeneID:3520129
KEGG:cps:CPS_0875 PATRIC:21465043 HOGENOM:HOG000231585 KO:K02355
OMA:WRYANDS ProtClustDB:PRK12740 BioCyc:CPSY167879:GI48-961-MONOMER
HAMAP:MF_00054_B TIGRFAMs:TIGR00484 Uniprot:Q487Z1
Length = 701
Score = 196 (74.1 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 51/128 (39%), Positives = 67/128 (52%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I AHVD GKTT + +L+ +G K ++ D E E ERGITI S S +N
Sbjct: 12 IFAHVDAGKTTTTERILKLTGQIHKTGEVHDGESTTDFMEQEAERGITIQSAAVSCFWND 71
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R N+IDTPGH DF EV R L ++D + + G PQ+ R A I++V
Sbjct: 72 HRFNVIDTPGHVDFTVEVYRSLKVLDGGVGVFCGSGGVEPQSETNWRYANDSKVARIIMV 131
Query: 1045 NKIDRSNA 1052
NK+DR A
Sbjct: 132 NKLDRLGA 139
Score = 136 (52.9 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 48/187 (25%), Positives = 88/187 (47%)
Query: 1136 GKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLIT 1195
G + RI SG +K D I+N K + + ++ + DR + A +GDI+ I
Sbjct: 321 GTLTFVRIYSGTLKK-GDT-ILNAATGKTER--VGRMCEMQADDRNELTSAQAGDIIAIV 376
Query: 1196 GIEE-ICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLD 1254
G++ + G T+CDP P L + +P ++I+ + + G I + +
Sbjct: 377 GMKSNVQTGHTLCDPKHPIVLEAMVFPKPVISISVTPKDKGSTEKMGLAIG-KMVAEDPT 435
Query: 1255 HEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK-TLN 1312
+++ +I D +SG GELHL I ++ ++R G EL V +P+V ++ T+
Sbjct: 436 FKVETDI---------DSGETILSGMGELHLDIKVDILKRTYGVELEVGKPQVAYRETIT 486
Query: 1313 GELYEPY 1319
+ + Y
Sbjct: 487 TAIEDSY 493
Score = 123 (48.4 bits), Expect = 7.3e-15, Sum P(3) = 7.3e-15
Identities = 46/153 (30%), Positives = 67/153 (43%)
Query: 40 VAHASKLNDPESFLLNEYNKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEA 99
+A SK + F + K T E +++ + G + H + D T+ + EA
Sbjct: 1 MADLSKYRNIGIFAHVDAGKTTTTERILK-----LTGQI-HKTGEVHDGESTTDFMEQEA 54
Query: 100 G-GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTR 158
GIT A + N +DTPGH FT R KV D V V GV PQ+
Sbjct: 55 ERGITIQSAAVSCFWNDHRFNVIDTPGHVDFTVEVYRSLKVLDGGVGVFCGSGGVEPQSE 114
Query: 159 EAIAHAKISGVPLIVAINKIDKLDINLDRI-KQ 190
+A S V I+ +NK+D+L + R+ KQ
Sbjct: 115 TNWRYANDSKVARIIMVNKLDRLGADFYRVCKQ 147
Score = 72 (30.4 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 23/83 (27%), Positives = 36/83 (43%)
Query: 1314 ELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNE 1373
+L EP + V + + G ++ LN R G + E VR++ +P + G+
Sbjct: 598 QLIEPIMKVDVFTPDDHVGDVIGDLNRRRGMIGGQEAGVSG-VRIKADVPLSEMFGYIGT 656
Query: 1374 FITLTRGTGLISHVFEEYAPFYN 1396
T+T G G S F Y P N
Sbjct: 657 LRTMTSGRGQFSMEFSHYMPCPN 679
Score = 55 (24.4 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 32/153 (20%), Positives = 61/153 (39%)
Query: 257 GPVATVLIQSGTLRCSDIVVAGAS-----YGRIRSMLNENGKNILEAGPSIPVEIQGLTK 311
G + V I SGTL+ D ++ A+ GR+ M ++ + A + I G+
Sbjct: 321 GTLTFVRIYSGTLKKGDTILNAATGKTERVGRMCEMQADDRNELTSAQAGDIIAIVGMKS 380
Query: 312 VPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKNLLIII 371
+G L E +F + + ++ + TE M I K ++ +
Sbjct: 381 NVQTGHTL-CDPKHPIVLEAMVFPKPVI-SISVTPKDKGSTEKMGLAIGKMVAEDPTFKV 438
Query: 372 KTDVYGSREVLTESLKNLSTDKVKIQVIHNAVG 404
+TD+ S E + + L D +K+ ++ G
Sbjct: 439 ETDI-DSGETILSGMGELHLD-IKVDILKRTYG 469
>UNIPROTKB|Q29N77 [details] [associations]
symbol:ico "Elongation factor G, mitochondrial"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 EMBL:CH379060
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 KO:K02355 TIGRFAMs:TIGR00484 OMA:QEPGKGY
OrthoDB:EOG40CFXZ GO:GO:0070125 RefSeq:XP_001356402.1
ProteinModelPortal:Q29N77 GeneID:4817299 KEGG:dpo:Dpse_GA18263
FlyBase:FBgn0078269 InParanoid:Q29N77 Uniprot:Q29N77
Length = 744
Score = 236 (88.1 bits), Expect = 1.3e-22, Sum P(4) = 1.3e-22
Identities = 55/134 (41%), Positives = 76/134 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 46 ISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 104
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ T +NIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 105 MWKDTNVNIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 164
Query: 1041 IVVVNKIDRSNARP 1054
+ +NK+DR + P
Sbjct: 165 LAFINKLDRLGSNP 178
Score = 126 (49.4 bits), Expect = 2.4e-11, Sum P(5) = 2.4e-11
Identities = 33/95 (34%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + ++ +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 94 GITIQSAATYTMWKDTNVNIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 153
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D+L N R+ + S+
Sbjct: 154 NRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSK 188
Score = 101 (40.6 bits), Expect = 1.3e-22, Sum P(4) = 1.3e-22
Identities = 40/135 (29%), Positives = 63/135 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T K N + + + EP +++ NN+
Sbjct: 402 VNEVYAGDIFALFGVD--CASGDTFTTNPKNNLAMESIFVPEPVVSMAIKPNNTKDRDNF 459
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I ++ H +N ++ T VSG GELHL I + M RE G +
Sbjct: 460 SKAIARFTKEDPTFHFFFDN-DVKETL---------VSGMGELHLEIYAQRMEREYGCPV 509
Query: 1300 SVSRPRVIFK-TLNG 1313
++ +P+V F+ TL G
Sbjct: 510 TLGKPKVAFRETLVG 524
Score = 71 (30.1 bits), Expect = 1.3e-22, Sum P(4) = 1.3e-22
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 630 VFQNGSWQILEPIMMVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 688
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G + + Y+P
Sbjct: 689 MFGYAGELRSSTQGKGEFTMEYSRYSP 715
Score = 51 (23.0 bits), Expect = 1.4e-20, Sum P(4) = 1.4e-20
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ +R G+L SG ++ ++LQD G
Sbjct: 561 EFVDETVGT----NVPKQFVPGVEKGYREMAER--GML----SGHRLSGIKFRLQDGGHH 610
Query: 1433 FINHNDLVY----EGMIIGIHSRDNDLLVNPIKEKQLT 1466
++ ++L + G I + + ++ PI ++T
Sbjct: 611 IVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMMVEVT 648
Score = 44 (20.5 bits), Expect = 2.4e-11, Sum P(5) = 2.4e-11
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 44 IGISAHIDSGKTTLTERI 61
Score = 41 (19.5 bits), Expect = 2.4e-11, Sum P(5) = 2.4e-11
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 316 GEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVK 365
G++ FV L K E G F G+ ++ + L K +N+FN +KV+
Sbjct: 342 GKDPFVGLAFKL--EAGRF--GQLTYLRCYQGVLRKGDNIFNARTNKKVR 387
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(5) = 1.3e-05
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 624 PILNFFYDNSIENAMM 639
P +FF+DN ++ ++
Sbjct: 471 PTFHFFFDNDVKETLV 486
Score = 39 (18.8 bits), Expect = 1.3e-22, Sum P(4) = 1.3e-22
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +A++ Y+P
Sbjct: 287 FTPVLVGTALKN-KGVQ----PLLDAVIDYLP 313
>POMBASE|SPAC513.01c [details] [associations]
symbol:eft201 "translation elongation factor 2 (EF-2)
Eft2,A" species:4896 "Schizosaccharomyces pombe" [GO:0002182
"cytoplasmic translational elongation" evidence=NAS] [GO:0003746
"translation elongation factor activity" evidence=TAS] [GO:0005525
"GTP binding" evidence=ISM] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005840 "ribosome" evidence=ISO] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 PomBase:SPCP31B10.07
PomBase:SPAC513.01c InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0005840 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0002182 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HOGENOM:HOG000231589 KO:K03234 EMBL:D83976
EMBL:D83975 EMBL:D89151 PIR:T41697 RefSeq:NP_587863.1
RefSeq:XP_001713073.1 ProteinModelPortal:O14460 SMR:O14460
DIP:DIP-57891N MINT:MINT-4672831 STRING:O14460 PRIDE:O14460
EnsemblFungi:SPAC513.01c.1 EnsemblFungi:SPCP31B10.07.1
GeneID:2539544 GeneID:3361483 KEGG:spo:SPAC513.01c
KEGG:spo:SPCP31B10.07 OMA:YVKAQPI OrthoDB:EOG4PZNFQ
NextBio:20800704 Uniprot:O14460
Length = 842
Score = 246 (91.7 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 58/141 (41%), Positives = 85/141 (60%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSI--EY- 982
++IAHVDHGK+TL D L++++G + +AR MD+ E+ERG+TI S S+ E
Sbjct: 23 SVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISLFAEMT 82
Query: 983 -----------NGTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFV 1029
+GT +N+ID+PGH DF EV L + D L+++D +EG QT V
Sbjct: 83 DDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETV 142
Query: 1030 TRKALKLGFKPIVVVNKIDRS 1050
R+AL +P+VVVNK+DR+
Sbjct: 143 LRQALGERIRPVVVVNKVDRA 163
Score = 99 (39.9 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 50/211 (23%), Positives = 99/211 (46%)
Query: 1111 VPVHKDNSNNPLQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMNGPDDKPNKA-- 1167
V + ++N PL + + + +S G+ GR+ SG ++S V I GP+ P K
Sbjct: 367 VGIRNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSGTVRSGLKVRIQ-GPNYVPGKKDD 425
Query: 1168 ---KINQIRVFKGLDRVL-VNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNID- 1221
K Q V R+ + + +G+I+ + G+++ + S T+ + + ++
Sbjct: 426 LFIKAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSV 485
Query: 1222 EPTLTINFMVNNSPLAGRE-GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
P + + V N G + K + +K RL K++ + T ++ + I V+G
Sbjct: 486 SPVVQVAVEVKN----GNDLPKLV--EGLK-RLS---KSDPCVLCTTSESGEHI--VAGA 533
Query: 1281 GELHLTILIENMRRE--GYELSVSRPRVIFK 1309
GELHL I +++++ + G L +S P V ++
Sbjct: 534 GELHLEICLKDLQEDHAGIPLKISPPVVSYR 564
Score = 98 (39.6 bits), Expect = 7.5e-07, Sum P(3) = 7.5e-07
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +D+PGH F++ +VTD ++VV +GV QT + A + +V +NK
Sbjct: 100 VNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNK 159
Query: 178 IDKLDINLDRIKQDL 192
+D+ + L +++L
Sbjct: 160 VDRALLELQISQEEL 174
Score = 59 (25.8 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 1283 LHLTILIENMRREGYELSVSRPRVIF-KTLNGE--LYEPYENLFVDIEEINQGIIMQKLN 1339
L + + + + R G ++ + RV++ TL + EP + + + E G I LN
Sbjct: 689 LDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLN 748
Query: 1340 YRGGDLKNIEINEKERV-----RLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G + +E++RV ++ +P GF E T G VF+ ++P
Sbjct: 749 KKRGHV----FSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSP 803
Score = 41 (19.5 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 1453 NDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLE 1488
N +++PI + + +S DE L+S +++T++
Sbjct: 274 NMFILDPIY-RIFDAVMNSRKDEVFTLLSKLEVTIK 308
Score = 37 (18.1 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 1151 LQDVVIMNGPDDKPNKAKINQIRVFKGLDRVL--VNEALS 1188
++ VV++N D + +I+Q +++ RV+ VN +S
Sbjct: 151 IRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVIS 190
>POMBASE|SPCP31B10.07 [details] [associations]
symbol:eft202 "translation elongation factor 2 (EF-2)
Eft2,B" species:4896 "Schizosaccharomyces pombe" [GO:0002182
"cytoplasmic translational elongation" evidence=NAS] [GO:0003746
"translation elongation factor activity" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005525 "GTP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005840 "ribosome" evidence=ISO]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 PomBase:SPCP31B10.07
PomBase:SPAC513.01c InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003924 GO:GO:0006184 GO:GO:0005840 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0002182 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HOGENOM:HOG000231589 KO:K03234 EMBL:D83976
EMBL:D83975 EMBL:D89151 PIR:T41697 RefSeq:NP_587863.1
RefSeq:XP_001713073.1 ProteinModelPortal:O14460 SMR:O14460
DIP:DIP-57891N MINT:MINT-4672831 STRING:O14460 PRIDE:O14460
EnsemblFungi:SPAC513.01c.1 EnsemblFungi:SPCP31B10.07.1
GeneID:2539544 GeneID:3361483 KEGG:spo:SPAC513.01c
KEGG:spo:SPCP31B10.07 OMA:YVKAQPI OrthoDB:EOG4PZNFQ
NextBio:20800704 Uniprot:O14460
Length = 842
Score = 246 (91.7 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 58/141 (41%), Positives = 85/141 (60%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSI--EY- 982
++IAHVDHGK+TL D L++++G + +AR MD+ E+ERG+TI S S+ E
Sbjct: 23 SVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISLFAEMT 82
Query: 983 -----------NGTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFV 1029
+GT +N+ID+PGH DF EV L + D L+++D +EG QT V
Sbjct: 83 DDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETV 142
Query: 1030 TRKALKLGFKPIVVVNKIDRS 1050
R+AL +P+VVVNK+DR+
Sbjct: 143 LRQALGERIRPVVVVNKVDRA 163
Score = 99 (39.9 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 50/211 (23%), Positives = 99/211 (46%)
Query: 1111 VPVHKDNSNNPLQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMNGPDDKPNKA-- 1167
V + ++N PL + + + +S G+ GR+ SG ++S V I GP+ P K
Sbjct: 367 VGIRNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSGTVRSGLKVRIQ-GPNYVPGKKDD 425
Query: 1168 ---KINQIRVFKGLDRVL-VNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNID- 1221
K Q V R+ + + +G+I+ + G+++ + S T+ + + ++
Sbjct: 426 LFIKAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEVAHNMKVMKFSV 485
Query: 1222 EPTLTINFMVNNSPLAGRE-GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGR 1280
P + + V N G + K + +K RL K++ + T ++ + I V+G
Sbjct: 486 SPVVQVAVEVKN----GNDLPKLV--EGLK-RLS---KSDPCVLCTTSESGEHI--VAGA 533
Query: 1281 GELHLTILIENMRRE--GYELSVSRPRVIFK 1309
GELHL I +++++ + G L +S P V ++
Sbjct: 534 GELHLEICLKDLQEDHAGIPLKISPPVVSYR 564
Score = 98 (39.6 bits), Expect = 7.5e-07, Sum P(3) = 7.5e-07
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +D+PGH F++ +VTD ++VV +GV QT + A + +V +NK
Sbjct: 100 VNLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNK 159
Query: 178 IDKLDINLDRIKQDL 192
+D+ + L +++L
Sbjct: 160 VDRALLELQISQEEL 174
Score = 59 (25.8 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 27/119 (22%), Positives = 51/119 (42%)
Query: 1283 LHLTILIENMRREGYELSVSRPRVIF-KTLNGE--LYEPYENLFVDIEEINQGIIMQKLN 1339
L + + + + R G ++ + RV++ TL + EP + + + E G I LN
Sbjct: 689 LDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLN 748
Query: 1340 YRGGDLKNIEINEKERV-----RLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G + +E++RV ++ +P GF E T G VF+ ++P
Sbjct: 749 KKRGHV----FSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAFPQLVFDHWSP 803
Score = 41 (19.5 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 9/36 (25%), Positives = 21/36 (58%)
Query: 1453 NDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLE 1488
N +++PI + + +S DE L+S +++T++
Sbjct: 274 NMFILDPIY-RIFDAVMNSRKDEVFTLLSKLEVTIK 308
Score = 37 (18.1 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 1151 LQDVVIMNGPDDKPNKAKINQIRVFKGLDRVL--VNEALS 1188
++ VV++N D + +I+Q +++ RV+ VN +S
Sbjct: 151 IRPVVVVNKVDRALLELQISQEELYQNFARVVESVNVVIS 190
>UNIPROTKB|B4MZW9 [details] [associations]
symbol:ico "Elongation factor G, mitochondrial"
species:7260 "Drosophila willistoni" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
KO:K02355 TIGRFAMs:TIGR00484 OMA:QEPGKGY OrthoDB:EOG40CFXZ
GO:GO:0070125 EMBL:CH963920 RefSeq:XP_002066918.1
ProteinModelPortal:B4MZW9 STRING:B4MZW9 EnsemblMetazoa:FBtr0255383
GeneID:6643963 KEGG:dwi:Dwil_GK24732 FlyBase:FBgn0226692
InParanoid:B4MZW9 Uniprot:B4MZW9
Length = 745
Score = 236 (88.1 bits), Expect = 1.6e-22, Sum P(4) = 1.6e-22
Identities = 56/134 (41%), Positives = 76/134 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 47 ISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 105
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 106 LWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 165
Query: 1041 IVVVNKIDRSNARP 1054
+ +NK+DR + P
Sbjct: 166 LAFINKLDRLGSNP 179
Score = 127 (49.8 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 95 GITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 154
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D+L N R+ + S+
Sbjct: 155 NRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSK 189
Score = 99 (39.9 bits), Expect = 1.6e-22, Sum P(4) = 1.6e-22
Identities = 42/138 (30%), Positives = 64/138 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTIC-DPSKPNGLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T +P + + + EP +++ NN+
Sbjct: 403 VNEVFAGDIFALFGVD--CASGDTFTTNPKNHLAMESIFVPEPVVSMAIKPNNTKDRDNF 460
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKH-DDSIYE--VSGRGELHLTILIENMRRE-G 1296
K I R E T + H D+ + E VSG GELHL I + M RE G
Sbjct: 461 SKAIA------RFTKEDP-------TFHFHFDNDVKETLVSGMGELHLEIYAQRMEREYG 507
Query: 1297 YELSVSRPRVIFK-TLNG 1313
+++ +P+V F+ TL G
Sbjct: 508 CPVTLGKPKVAFRETLVG 525
Score = 70 (29.7 bits), Expect = 1.6e-22, Sum P(4) = 1.6e-22
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 631 VFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 689
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G + + Y+P
Sbjct: 690 MFGYAGELRSSTQGKGEFTMEYSRYSP 716
Score = 49 (22.3 bits), Expect = 2.2e-20, Sum P(4) = 2.2e-20
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ +R G+L SG ++ ++LQD G
Sbjct: 562 EFVDETVGT----NVPKQFIPGVEKGYREMAER--GML----SGHKLSGIRFRLQDGGHH 611
Query: 1433 FINHNDLVY----EGMIIGIHSRDNDLLVNPIKEKQLT 1466
++ ++L + G I + + ++ PI ++T
Sbjct: 612 IVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVT 649
Score = 46 (21.3 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 295 ILEAGPSIPVEIQGLTKVPFSGEELF-VILN---EKKAREIGL-FR--QGKFRDV---KL 344
+L+ P+ P E++ L + G+E V+LN + K +GL F+ G+F + +
Sbjct: 309 VLDYLPN-PGEVENLAFIEHEGKEPEKVVLNPARDGKDPFMGLAFKLEAGRFGQLTYLRC 367
Query: 345 SKQKLHKTENMFNDINKEKVK 365
+ L K +N+FN +KV+
Sbjct: 368 YQGVLRKGDNIFNARTNKKVR 388
Score = 44 (20.5 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 45 IGISAHIDSGKTTLTERI 62
Score = 41 (19.5 bits), Expect = 1.6e-22, Sum P(4) = 1.6e-22
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +A+L Y+P
Sbjct: 288 FTPVLVGTALKN-KGVQ----PLLDAVLDYLP 314
>UNIPROTKB|B4LS49 [details] [associations]
symbol:ico "Elongation factor G, mitochondrial"
species:7244 "Drosophila virilis" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 EMBL:CH940649
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 KO:K02355 TIGRFAMs:TIGR00484 OMA:QEPGKGY
OrthoDB:EOG40CFXZ GO:GO:0070125 RefSeq:XP_002052580.1
ProteinModelPortal:B4LS49 STRING:B4LS49 EnsemblMetazoa:FBtr0233546
GeneID:6628624 KEGG:dvi:Dvir_GJ17621 FlyBase:FBgn0204790
InParanoid:B4LS49 Uniprot:B4LS49
Length = 747
Score = 236 (88.1 bits), Expect = 1.7e-22, Sum P(4) = 1.7e-22
Identities = 56/134 (41%), Positives = 76/134 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 49 ISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 107
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 108 LWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 167
Query: 1041 IVVVNKIDRSNARP 1054
+ +NK+DR + P
Sbjct: 168 LAFINKLDRLGSNP 181
Score = 127 (49.8 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 97 GITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 156
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D+L N R+ + S+
Sbjct: 157 NRQMKRYNVPCLAFINKLDRLGSNPYRVLSQMRSK 191
Score = 99 (39.9 bits), Expect = 1.7e-22, Sum P(4) = 1.7e-22
Identities = 39/135 (28%), Positives = 63/135 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTIC-DPSKPNGLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T +P + + + EP +++ NN+
Sbjct: 405 VNEVYAGDIFALFGVD--CASGDTFTTNPKNHMAMESIFVPEPVVSMAIKPNNTKDRDNF 462
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I ++ H +N ++ T VSG GELHL I + M RE G +
Sbjct: 463 SKAIARFTKEDPTFHFYFDN-DVKETL---------VSGMGELHLEIYAQRMEREYGCPV 512
Query: 1300 SVSRPRVIFK-TLNG 1313
++ +P+V F+ TL G
Sbjct: 513 TLGKPKVAFRETLVG 527
Score = 71 (30.1 bits), Expect = 1.7e-22, Sum P(4) = 1.7e-22
Identities = 21/87 (24%), Positives = 40/87 (45%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 633 VFQNGSWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 691
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ +E + T+G G + + Y+P
Sbjct: 692 MFGYASELRSSTQGKGEFTMEYSRYSP 718
Score = 49 (22.3 bits), Expect = 2.8e-20, Sum P(4) = 2.8e-20
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ +R G+L SG ++ ++LQD G
Sbjct: 564 EFVDETVGT----NVPKQFVPGVEKGFREMSER--GML----SGHKLSGVRFRLQDGGHH 613
Query: 1433 FINHNDLVY----EGMIIGIHSRDNDLLVNPIKEKQLT 1466
++ ++L + G I + + ++ PI ++T
Sbjct: 614 IVDSSELAFMLAAHGAIKEVFQNGSWQILEPIMLVEVT 651
Score = 45 (20.9 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 23/81 (28%), Positives = 42/81 (51%)
Query: 295 ILEAGPSIPVEIQGLTKVPFSGEELF-VILN---EKKAREIGL-FR--QGKFRDV---KL 344
I++ P+ P E++ L + G+E V+LN + K +GL F+ G+F + +
Sbjct: 311 IIDYLPN-PGEVENLAYIEQEGKEKQQVVLNPARDGKDPFMGLAFKLEAGRFGQLTYLRC 369
Query: 345 SKQKLHKTENMFNDINKEKVK 365
+ L K +N+FN +KV+
Sbjct: 370 YQGVLRKGDNIFNARTNKKVR 390
Score = 44 (20.5 bits), Expect = 1.2e-11, Sum P(5) = 1.2e-11
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 47 IGISAHIDSGKTTLTERI 64
Score = 40 (19.1 bits), Expect = 1.7e-22, Sum P(4) = 1.7e-22
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +AI+ Y+P
Sbjct: 290 FTPVLVGTALKN-KGVQ----PLLDAIIDYLP 316
Score = 38 (18.4 bits), Expect = 8.5e-06, Sum P(5) = 8.5e-06
Identities = 4/16 (25%), Positives = 11/16 (68%)
Query: 624 PILNFFYDNSIENAMM 639
P +F++DN ++ ++
Sbjct: 474 PTFHFYFDNDVKETLV 489
Score = 37 (18.1 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 1454 DLLVNPIKEKQLTNIRSSGSDEAIQLISPIK 1484
D L NP + + L I G ++ +++P +
Sbjct: 313 DYLPNPGEVENLAYIEQEGKEKQQVVLNPAR 343
>DICTYBASE|DDB_G0287685 [details] [associations]
symbol:cinC "vegetative specific protein H6"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IMP] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005840 "ribosome" evidence=ISS]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 SMART:SM00889 dictyBase:DDB_G0287685
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0006412 GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0005840 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
KO:K03234 ProtClustDB:PTZ00416 RefSeq:XP_637051.1
ProteinModelPortal:Q54JV1 SMR:Q54JV1 STRING:Q54JV1
EnsemblProtists:DDB0216236 GeneID:8626305 KEGG:ddi:DDB_G0287685
InParanoid:Q54JV1 OMA:SSHEFLI Uniprot:Q54JV1
Length = 853
Score = 240 (89.5 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 56/138 (40%), Positives = 78/138 (56%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
++IAHVDHGKTTL D L++++G + NA M E+ RGITI S + S+ +
Sbjct: 23 SVIAHVDHGKTTLTDSLIQRAGIIADKVSGNAGYMSCRPDEQLRGITIKSSSVSLHFEMP 82
Query: 986 R--------------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
+ IN+ID+PGH DF EV L + D L++ID VEG QT V R
Sbjct: 83 KDEKLPTGCSSHEFLINLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETVLR 142
Query: 1032 KALKLGFKPIVVVNKIDR 1049
+A+ KP++ VNK+DR
Sbjct: 143 QAMAERIKPVLFVNKVDR 160
Score = 115 (45.5 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 51/201 (25%), Positives = 91/201 (45%)
Query: 1119 NNPLQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMNGPDDKPNKA------KINQ 1171
N PL + + + +S G+ GR+ SG I++ Q V IM GPD P K I +
Sbjct: 388 NGPLMMYVSKMIPTSDKGRFYAFGRVFSGTIRTGQKVRIM-GPDYVPGKKDDLYLKSIQR 446
Query: 1172 IRVFKGLDRVLVNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNID-EPTLTINF 1229
+ G L+++ G+I+ + G+++ + S TI + + ++ P + +
Sbjct: 447 TVLMMGRKIELLDDCPCGNIIGLVGVDQFLVKSGTISTEETAHNIRVMKFSVSPVVRVAV 506
Query: 1230 MVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILI 1289
N P K I +I + D + L +T+ + + V+G GELHL I +
Sbjct: 507 QPKN-P--SELPKLIEGLKILAKADPCV-----LCITETSGE---HIVAGAGELHLEICL 555
Query: 1290 ENMRRE--GYELSVSRPRVIF 1308
+++ + G E+ S P V F
Sbjct: 556 KDLEEDHAGIEIITSDPVVSF 576
Score = 98 (39.6 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ +VTD ++V+ +GV QT + A + ++ +NK
Sbjct: 98 INLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETVLRQAMAERIKPVLFVNK 157
Query: 178 IDKLDINLDRIKQD 191
+D+ + L +D
Sbjct: 158 VDRFLLELQLNSED 171
Score = 66 (28.3 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGG 101
++++ HVDHGKT+L D I++ ++ + G
Sbjct: 22 MSVIAHVDHGKTTLTDSLIQRAGIIADKVSG 52
>UNIPROTKB|Q2GJV7 [details] [associations]
symbol:lepA "Elongation factor 4" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
RefSeq:YP_505344.1 ProteinModelPortal:Q2GJV7 STRING:Q2GJV7
GeneID:3930016 KEGG:aph:APH_0765 PATRIC:20950222
ProtClustDB:PRK05433 BioCyc:APHA212042:GHPM-781-MONOMER
Uniprot:Q2GJV7
Length = 598
Score = 246 (91.7 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAH+DHGK+TL D L+ + +++ +++DS +IE+ERGITI ++ ++Y
Sbjct: 10 AIIAHIDHGKSTLADRLIESCDALAE-RDMKEQVLDSMDIERERGITIKAQTVRLKYTSK 68
Query: 986 R-----INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+N++DTPGH DF EV R L+ + LL+ID+ +G QT KA++ +
Sbjct: 69 AGEVYYLNLVDTPGHVDFSYEVSRSLAACEGSLLVIDSSQGVEAQTLANVYKAIENNHEI 128
Query: 1041 IVVVNKIDRSNARPEWV 1057
I V+NK+D +A PE V
Sbjct: 129 ITVLNKVDLVSADPEKV 145
Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/156 (31%), Positives = 79/156 (50%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R + +LV+ + GV QT + A + +I +NK
Sbjct: 75 LNLVDTPGHVDFSYEVSRSLAACEGSLLVIDSSQGVEAQTLANVYKAIENNHEIITVLNK 134
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
+D + + +++K + E +I + AS + +SAKTG+GIN +LE I I L A
Sbjct: 135 VDLVSADPEKVKSQV--ETIIGLD---ASDALLVSAKTGIGINDVLEAI-----IERLPA 184
Query: 238 PV---TTPAKGVIIESRLDKGKGPVATVLIQSGTLR 270
P P K V+++S D G V V I+ G L+
Sbjct: 185 PEGDEEAPLKAVLVDSWYDPYLGIVILVRIKDGVLK 220
Score = 103 (41.3 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 71/320 (22%), Positives = 132/320 (41%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ EAI++ +P + + PL+ ++ Y YLG + + RI G +K + +M+
Sbjct: 174 VLEAIIERLPAPEGDEEAPLKAVLVDSWYDPYLGIVILVRIKDGVLKKGMKICMMS---- 229
Query: 1163 KPNKAKINQIRVFKGLDRVLVNEALS-GDIVLIT-GIEEI--C-IGSTICDPSK--PNGL 1215
++ + VF +++ +ALS G+I IT GI+E+ C +G T+ + ++ L
Sbjct: 230 TGAVYTVDNVGVFTPHKKMV--DALSVGEIGFITAGIKELLACKVGDTVTEDARRCAEAL 287
Query: 1216 PMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
P P + + P+ G F R+ +L + + + +
Sbjct: 288 PGFRATCPVVFCSLF----PVDA--GSFEHLREALGKLQLN-DASFTFDIESSTALGYGF 340
Query: 1276 EVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKTLN-----------GELYEPYENLF 1323
G LHL ++ E + RE +L+ + P V++K + +L E +E L
Sbjct: 341 RCGFLGMLHLEVVQERLEREFDLDLTATAPSVVYKVTDKRNVTRDIHNPNDLPEAHEILK 400
Query: 1324 VDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRL---------EYRIPSRGLI-GFQNE 1373
V+ E IM Y G L ERV L +YR+P ++ F +
Sbjct: 401 VE-EPWIMATIMVPDQYLGSMLALCNGKRGERVDLSYTGNMALLQYRLPLAEIVFDFYDR 459
Query: 1374 FITLTRGTGLISHVFEEYAP 1393
++++G + Y P
Sbjct: 460 LKSISKGYASFDWQMDGYMP 479
>TIGR_CMR|APH_0765 [details] [associations]
symbol:APH_0765 "GTP-binding protein LepA" species:212042
"Anaplasma phagocytophilum HZ" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
RefSeq:YP_505344.1 ProteinModelPortal:Q2GJV7 STRING:Q2GJV7
GeneID:3930016 KEGG:aph:APH_0765 PATRIC:20950222
ProtClustDB:PRK05433 BioCyc:APHA212042:GHPM-781-MONOMER
Uniprot:Q2GJV7
Length = 598
Score = 246 (91.7 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 54/137 (39%), Positives = 84/137 (61%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
AIIAH+DHGK+TL D L+ + +++ +++DS +IE+ERGITI ++ ++Y
Sbjct: 10 AIIAHIDHGKSTLADRLIESCDALAE-RDMKEQVLDSMDIERERGITIKAQTVRLKYTSK 68
Query: 986 R-----INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+N++DTPGH DF EV R L+ + LL+ID+ +G QT KA++ +
Sbjct: 69 AGEVYYLNLVDTPGHVDFSYEVSRSLAACEGSLLVIDSSQGVEAQTLANVYKAIENNHEI 128
Query: 1041 IVVVNKIDRSNARPEWV 1057
I V+NK+D +A PE V
Sbjct: 129 ITVLNKVDLVSADPEKV 145
Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/156 (31%), Positives = 79/156 (50%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R + +LV+ + GV QT + A + +I +NK
Sbjct: 75 LNLVDTPGHVDFSYEVSRSLAACEGSLLVIDSSQGVEAQTLANVYKAIENNHEIITVLNK 134
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
+D + + +++K + E +I + AS + +SAKTG+GIN +LE I I L A
Sbjct: 135 VDLVSADPEKVKSQV--ETIIGLD---ASDALLVSAKTGIGINDVLEAI-----IERLPA 184
Query: 238 PV---TTPAKGVIIESRLDKGKGPVATVLIQSGTLR 270
P P K V+++S D G V V I+ G L+
Sbjct: 185 PEGDEEAPLKAVLVDSWYDPYLGIVILVRIKDGVLK 220
Score = 103 (41.3 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 71/320 (22%), Positives = 132/320 (41%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ EAI++ +P + + PL+ ++ Y YLG + + RI G +K + +M+
Sbjct: 174 VLEAIIERLPAPEGDEEAPLKAVLVDSWYDPYLGIVILVRIKDGVLKKGMKICMMS---- 229
Query: 1163 KPNKAKINQIRVFKGLDRVLVNEALS-GDIVLIT-GIEEI--C-IGSTICDPSK--PNGL 1215
++ + VF +++ +ALS G+I IT GI+E+ C +G T+ + ++ L
Sbjct: 230 TGAVYTVDNVGVFTPHKKMV--DALSVGEIGFITAGIKELLACKVGDTVTEDARRCAEAL 287
Query: 1216 PMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
P P + + P+ G F R+ +L + + + +
Sbjct: 288 PGFRATCPVVFCSLF----PVDA--GSFEHLREALGKLQLN-DASFTFDIESSTALGYGF 340
Query: 1276 EVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKTLN-----------GELYEPYENLF 1323
G LHL ++ E + RE +L+ + P V++K + +L E +E L
Sbjct: 341 RCGFLGMLHLEVVQERLEREFDLDLTATAPSVVYKVTDKRNVTRDIHNPNDLPEAHEILK 400
Query: 1324 VDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRL---------EYRIPSRGLI-GFQNE 1373
V+ E IM Y G L ERV L +YR+P ++ F +
Sbjct: 401 VE-EPWIMATIMVPDQYLGSMLALCNGKRGERVDLSYTGNMALLQYRLPLAEIVFDFYDR 459
Query: 1374 FITLTRGTGLISHVFEEYAP 1393
++++G + Y P
Sbjct: 460 LKSISKGYASFDWQMDGYMP 479
>CGD|CAL0001544 [details] [associations]
symbol:EFT2 species:5476 "Candida albicans" [GO:0030445
"yeast-form cell wall" evidence=IDA] [GO:0003746 "translation
elongation factor activity" evidence=ISS;IMP] [GO:0005840
"ribosome" evidence=ISS] [GO:0006414 "translational elongation"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008144 "drug binding" evidence=IMP;IDA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0035690 "cellular response to drug" evidence=IDA] [GO:0005829
"cytosol" evidence=IEA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 CGD:CAL0001544
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0009986 GO:GO:0030445 GO:GO:0008144
GO:GO:0003924 GO:GO:0005840 GO:GO:0003746 GO:GO:0035690
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 EMBL:AACQ01000088 EMBL:AACQ01000087
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 KO:K03234
EMBL:Y09664 RefSeq:XP_715264.1 RefSeq:XP_715329.1
ProteinModelPortal:Q5A0M4 SMR:Q5A0M4 STRING:Q5A0M4 PRIDE:Q5A0M4
GeneID:3642998 GeneID:3643055 KEGG:cal:CaO19.13210
KEGG:cal:CaO19.5788 CGD:CAL0064595 Uniprot:Q5A0M4
Length = 842
Score = 253 (94.1 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 62/167 (37%), Positives = 93/167 (55%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSI----- 980
++IAHVDHGK+TL D L++++G + +AR MD+ + E+ERGITI S S+
Sbjct: 23 SVIAHVDHGKSTLSDSLVQKAGIISAAKAGDARFMDTRKDEQERGITIKSTAISLYASMT 82
Query: 981 -----------EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFV 1029
+ N +N+ID+PGH DF EV L + D L+++D VEG QT V
Sbjct: 83 DEDVKDIKQKTDGNSFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETV 142
Query: 1030 TRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLD 1076
R+AL KP+VV+NK+DR+ + + DL+ T E ++
Sbjct: 143 LRQALGERIKPVVVINKVDRALLELQTTKE---DLYQTFARTVESVN 186
Score = 111 (44.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +D+PGH F++ +VTD ++VV +GV QT + A + +V INK
Sbjct: 100 VNLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVVINK 159
Query: 178 IDKLDINLDRIKQDL 192
+D+ + L K+DL
Sbjct: 160 VDRALLELQTTKEDL 174
Score = 100 (40.3 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 1119 NNPLQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMNGPDDKPNKAK------INQ 1171
N L L + + +S G+ GR+ +G +KS Q V I GP+ + K + I +
Sbjct: 375 NADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQ-GPNYQVGKKEDLFLKSIQR 433
Query: 1172 IRVFKGLDRVLVNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNID-EPTLTINF 1229
+ G +++ +G+I+ + GI++ + S TI + + ++ P + +
Sbjct: 434 TVLMMGRSVEQIDDCPAGNIIGLVGIDQFLLKSGTITTNEAAHNMKVMKFSVSPVVQVAV 493
Query: 1230 MVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILI 1289
V N A K + +K RL K++ + ++ + I V+G GELHL I +
Sbjct: 494 EVKN---ANDLPKLV--EGLK-RLS---KSDPCVLTYMSESGEHI--VAGTGELHLEICL 542
Query: 1290 ENMRRE--GYELSVSRPRVIFK-TLNGE 1314
+++ + G L +S P V ++ T+ GE
Sbjct: 543 QDLENDHAGVPLRISPPVVSYRETVEGE 570
>UNIPROTKB|Q5A0M4 [details] [associations]
symbol:EFT2 "Elongation factor 2" species:237561 "Candida
albicans SC5314" [GO:0003746 "translation elongation factor
activity" evidence=ISS;IMP] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0005840 "ribosome" evidence=ISS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006414 "translational elongation" evidence=ISS]
[GO:0008144 "drug binding" evidence=IDA;IMP] [GO:0009986 "cell
surface" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030445 "yeast-form cell wall" evidence=IDA] [GO:0035690
"cellular response to drug" evidence=IDA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 CGD:CAL0001544 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009986 GO:GO:0030445 GO:GO:0008144 GO:GO:0003924
GO:GO:0005840 GO:GO:0003746 GO:GO:0035690 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
EMBL:AACQ01000088 EMBL:AACQ01000087 InterPro:IPR009022
SMART:SM00838 SUPFAM:SSF54980 KO:K03234 EMBL:Y09664
RefSeq:XP_715264.1 RefSeq:XP_715329.1 ProteinModelPortal:Q5A0M4
SMR:Q5A0M4 STRING:Q5A0M4 PRIDE:Q5A0M4 GeneID:3642998 GeneID:3643055
KEGG:cal:CaO19.13210 KEGG:cal:CaO19.5788 CGD:CAL0064595
Uniprot:Q5A0M4
Length = 842
Score = 253 (94.1 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 62/167 (37%), Positives = 93/167 (55%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSI----- 980
++IAHVDHGK+TL D L++++G + +AR MD+ + E+ERGITI S S+
Sbjct: 23 SVIAHVDHGKSTLSDSLVQKAGIISAAKAGDARFMDTRKDEQERGITIKSTAISLYASMT 82
Query: 981 -----------EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFV 1029
+ N +N+ID+PGH DF EV L + D L+++D VEG QT V
Sbjct: 83 DEDVKDIKQKTDGNSFLVNLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETV 142
Query: 1030 TRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLD 1076
R+AL KP+VV+NK+DR+ + + DL+ T E ++
Sbjct: 143 LRQALGERIKPVVVINKVDRALLELQTTKE---DLYQTFARTVESVN 186
Score = 111 (44.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +D+PGH F++ +VTD ++VV +GV QT + A + +V INK
Sbjct: 100 VNLIDSPGHVDFSSEVTAALRVTDGALVVVDTVEGVCVQTETVLRQALGERIKPVVVINK 159
Query: 178 IDKLDINLDRIKQDL 192
+D+ + L K+DL
Sbjct: 160 VDRALLELQTTKEDL 174
Score = 100 (40.3 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 51/208 (24%), Positives = 97/208 (46%)
Query: 1119 NNPLQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMNGPDDKPNKAK------INQ 1171
N L L + + +S G+ GR+ +G +KS Q V I GP+ + K + I +
Sbjct: 375 NADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQ-GPNYQVGKKEDLFLKSIQR 433
Query: 1172 IRVFKGLDRVLVNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNID-EPTLTINF 1229
+ G +++ +G+I+ + GI++ + S TI + + ++ P + +
Sbjct: 434 TVLMMGRSVEQIDDCPAGNIIGLVGIDQFLLKSGTITTNEAAHNMKVMKFSVSPVVQVAV 493
Query: 1230 MVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILI 1289
V N A K + +K RL K++ + ++ + I V+G GELHL I +
Sbjct: 494 EVKN---ANDLPKLV--EGLK-RLS---KSDPCVLTYMSESGEHI--VAGTGELHLEICL 542
Query: 1290 ENMRRE--GYELSVSRPRVIFK-TLNGE 1314
+++ + G L +S P V ++ T+ GE
Sbjct: 543 QDLENDHAGVPLRISPPVVSYRETVEGE 570
>UNIPROTKB|B4KKD5 [details] [associations]
symbol:ico "Elongation factor G, mitochondrial"
species:7230 "Drosophila mojavensis" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 EMBL:CH933807
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
KO:K02355 TIGRFAMs:TIGR00484 OrthoDB:EOG40CFXZ GO:GO:0070125
RefSeq:XP_002003224.1 ProteinModelPortal:B4KKD5
EnsemblMetazoa:FBtr0168522 GeneID:6577257 KEGG:dmo:Dmoj_GI17797
FlyBase:FBgn0140538 InParanoid:B4KKD5 Uniprot:B4KKD5
Length = 747
Score = 233 (87.1 bits), Expect = 2.8e-22, Sum P(4) = 2.8e-22
Identities = 55/134 (41%), Positives = 75/134 (55%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + +L +G R N+ A MDS E+E++RGITI S
Sbjct: 49 ISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGAT-MDSMELERQRGITIQSAATYT 107
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 108 VWKDVNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 167
Query: 1041 IVVVNKIDRSNARP 1054
+ +NK+DR + P
Sbjct: 168 LAFINKLDRMGSNP 181
Score = 127 (49.8 bits), Expect = 3.9e-12, Sum P(5) = 3.9e-12
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A V +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 97 GITIQSAATYTVWKDVNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 156
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ N R+ + S+
Sbjct: 157 NRQMKRYNVPCLAFINKLDRMGSNPYRVLSQMRSK 191
Score = 105 (42.0 bits), Expect = 2.8e-22, Sum P(4) = 2.8e-22
Identities = 42/137 (30%), Positives = 63/137 (45%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T K N + + + EP +++ NN+
Sbjct: 405 VNEVFAGDIFALFGVD--CASGDTFTTNPKNNMSMESIFVPEPVVSMAIKPNNTKDRDNF 462
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYE--VSGRGELHLTILIENMRRE-GY 1297
K I ++ H K D+ I E VSG GELHL I + M RE G
Sbjct: 463 SKAIARFTKEDPTFHF------------KFDNDIKETLVSGMGELHLEIYAQRMEREYGC 510
Query: 1298 ELSVSRPRVIFK-TLNG 1313
+++ +P+V F+ TL G
Sbjct: 511 PVTLGKPKVAFRETLVG 527
Score = 68 (29.0 bits), Expect = 2.8e-22, Sum P(4) = 2.8e-22
Identities = 21/87 (24%), Positives = 39/87 (44%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ ++ EP + V E QG +M L+ R G + E E + +P
Sbjct: 633 VFQNGAWQILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEGW-FTVYAEVPLND 691
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ +E + T+G G + + Y+P
Sbjct: 692 MFGYASELRSSTQGKGEFTMEYSRYSP 718
Score = 47 (21.6 bits), Expect = 3.9e-12, Sum P(5) = 3.9e-12
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 303 PVEIQGLTKVPFSGEELF-VILN---EKKAREIGL-FR--QGKFRDV---KLSKQKLHKT 352
P E++ L + G+E ++LN + K +GL F+ G+F + + + L K
Sbjct: 318 PGEVENLAYIEQEGQEKQQIVLNPARDGKDPFMGLAFKLEAGRFGQLTYLRCYQGALRKG 377
Query: 353 ENMFNDINKEKVK 365
+N++N N +KV+
Sbjct: 378 DNIYNARNHKKVR 390
Score = 46 (21.3 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 1373 EFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRL 1432
EF+ T GT +V +++ P K ++ +R G+L SG ++ ++LQD G
Sbjct: 564 EFVDETVGT----NVPKQFVPGVEKGYREMCER--GML----SGHKLSGIRFRLQDGGHH 613
Query: 1433 FINHNDLVY 1441
++ ++L +
Sbjct: 614 IVDSSELAF 622
Score = 44 (20.5 bits), Expect = 3.9e-12, Sum P(5) = 3.9e-12
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + I
Sbjct: 47 IGISAHIDSGKTTLTERI 64
Score = 41 (19.5 bits), Expect = 1.5e-11, Sum P(5) = 1.5e-11
Identities = 5/22 (22%), Positives = 16/22 (72%)
Query: 601 DNLSKAKNYIRFKLSKKLHIHT 622
DN+ A+N+ + ++++ + +H+
Sbjct: 378 DNIYNARNHKKVRIARLVRLHS 399
Score = 38 (18.4 bits), Expect = 2.8e-22, Sum P(4) = 2.8e-22
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +A++ Y+P
Sbjct: 290 FTPVLVGTALKN-KGVQ----PLLDAVVDYLP 316
>UNIPROTKB|Q81LR7 [details] [associations]
symbol:lepA "Elongation factor 4" species:1392 "Bacillus
anthracis" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0481 HOGENOM:HOG000020624 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA
KO:K03596 ProtClustDB:PRK05433 RefSeq:NP_846767.1
RefSeq:YP_021190.1 RefSeq:YP_030466.1 ProteinModelPortal:Q81LR7
SMR:Q81LR7 IntAct:Q81LR7 PRIDE:Q81LR7 DNASU:1088274
EnsemblBacteria:EBBACT00000012792 EnsemblBacteria:EBBACT00000013686
EnsemblBacteria:EBBACT00000019695 GeneID:1088274 GeneID:2818996
GeneID:2847940 KEGG:ban:BA_4544 KEGG:bar:GBAA_4544 KEGG:bat:BAS4218
BioCyc:BANT260799:GJAJ-4274-MONOMER
BioCyc:BANT261594:GJ7F-4420-MONOMER Uniprot:Q81LR7
Length = 607
Score = 237 (88.5 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 58/155 (37%), Positives = 90/155 (58%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
+IIAH+DHGK+TL D +L ++ + + + A+++DS ++E+ERGITI + Y
Sbjct: 17 SIIAHIDHGKSTLADRILEKTNALTQRE-MKAQLLDSMDLERERGITIKLNAIQLNYKAK 75
Query: 983 NGTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+G +++IDTPGH DF EV R L+ + +L++DA +G QT AL +
Sbjct: 76 DGEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEI 135
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQL 1075
+ V+NKID +A PE V D+ L A+E L
Sbjct: 136 LPVINKIDLPSADPERVRQEVEDVIG-LDASEAVL 169
Score = 165 (63.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 49/158 (31%), Positives = 83/158 (52%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH FT +R + +LVV A G+ QT + A + + ++ INKID
Sbjct: 85 IDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKIDL 144
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV- 239
+ +R++Q++ E VI + AS + SAK G+GI ++LE I + ++ AP
Sbjct: 145 PSADPERVRQEV--EDVIGLD---ASEAVLASAKAGIGIEEILEQI-----VEKVPAPTG 194
Query: 240 --TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIV 275
P + +I +S D +G +A + + +GT++ D V
Sbjct: 195 DSEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVKVGDKV 232
Score = 110 (43.8 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 72/322 (22%), Positives = 129/322 (40%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ E I++ VP +S PLQ I Y Y G I R+++G +K + D V M
Sbjct: 181 ILEQIVEKVPAPTGDSEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVK-VGDKVRMMATG- 238
Query: 1163 KPNKAKINQIRVF--KGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDPSKPNGLP 1216
+ ++ ++ VF K R +E GD+ L I+ + +G TI +P P
Sbjct: 239 --KEFEVTEVGVFTPKTTQR---DELTVGDVGFLAASIKNVGDTRVGDTITHAKRPAAEP 293
Query: 1217 MLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSI-- 1274
+ + +N MV ++ R +L+ N+ L + + ++
Sbjct: 294 LAGYRK----LNPMVFCGLYPIDSARYNDLRDALEKLE---LNDSALEF-EPETSQALGF 345
Query: 1275 -YEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKTL--NGE---------------- 1314
+ G LH+ IL E + RE +L + P VI+K NGE
Sbjct: 346 GFRCGFLGLLHMEILQERIEREFKIDLITTAPSVIYKVFLTNGEDMIVDNPSNMPDPQTI 405
Query: 1315 --LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI-GFQ 1371
+ EP+ + + G +M+ + G +++ ++ RV L Y IP ++ F
Sbjct: 406 DRVEEPFVKAAIMVPNDYVGAVMEICQGKRGTFIDMQYLDETRVTLTYEIPLSEIVYDFF 465
Query: 1372 NEFITLTRGTGLISHVFEEYAP 1393
++ + T+G + Y P
Sbjct: 466 DQLKSNTKGYASFDYELIGYKP 487
Score = 65 (27.9 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 58 NKNITAESLVRAPIVTIMGHVDHGKTSLLDYI-RKTNVV 95
NK A+ + +I+ H+DHGK++L D I KTN +
Sbjct: 2 NKEERAKRQSKIRNFSIIAHIDHGKSTLADRILEKTNAL 40
Score = 55 (24.4 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 27/97 (27%), Positives = 44/97 (45%)
Query: 311 KVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKNLLII 370
++P S E ++ ++ K+ G F D +L K K M +N E+V L I
Sbjct: 454 EIPLS-EIVYDFFDQLKSNTKGY---ASF-DYELIGYKPSKLVKMDILLNSEQVDALSFI 508
Query: 371 IKTD-VYGSREVLTESLKNLSTDKVKIQV-IHNAVGN 405
+ D Y +V+ E LK L + + +V I +GN
Sbjct: 509 VHRDSAYDRGKVIVEKLKEL-IPRQQFEVPIQATIGN 544
>TIGR_CMR|BA_4544 [details] [associations]
symbol:BA_4544 "GTP-binding protein LepA" species:198094
"Bacillus anthracis str. Ames" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0481 HOGENOM:HOG000020624 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA
KO:K03596 ProtClustDB:PRK05433 RefSeq:NP_846767.1
RefSeq:YP_021190.1 RefSeq:YP_030466.1 ProteinModelPortal:Q81LR7
SMR:Q81LR7 IntAct:Q81LR7 PRIDE:Q81LR7 DNASU:1088274
EnsemblBacteria:EBBACT00000012792 EnsemblBacteria:EBBACT00000013686
EnsemblBacteria:EBBACT00000019695 GeneID:1088274 GeneID:2818996
GeneID:2847940 KEGG:ban:BA_4544 KEGG:bar:GBAA_4544 KEGG:bat:BAS4218
BioCyc:BANT260799:GJAJ-4274-MONOMER
BioCyc:BANT261594:GJ7F-4420-MONOMER Uniprot:Q81LR7
Length = 607
Score = 237 (88.5 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 58/155 (37%), Positives = 90/155 (58%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
+IIAH+DHGK+TL D +L ++ + + + A+++DS ++E+ERGITI + Y
Sbjct: 17 SIIAHIDHGKSTLADRILEKTNALTQRE-MKAQLLDSMDLERERGITIKLNAIQLNYKAK 75
Query: 983 NGTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+G +++IDTPGH DF EV R L+ + +L++DA +G QT AL +
Sbjct: 76 DGEEYILHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEI 135
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQL 1075
+ V+NKID +A PE V D+ L A+E L
Sbjct: 136 LPVINKIDLPSADPERVRQEVEDVIG-LDASEAVL 169
Score = 165 (63.1 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 49/158 (31%), Positives = 83/158 (52%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH FT +R + +LVV A G+ QT + A + + ++ INKID
Sbjct: 85 IDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKIDL 144
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPV- 239
+ +R++Q++ E VI + AS + SAK G+GI ++LE I + ++ AP
Sbjct: 145 PSADPERVRQEV--EDVIGLD---ASEAVLASAKAGIGIEEILEQI-----VEKVPAPTG 194
Query: 240 --TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIV 275
P + +I +S D +G +A + + +GT++ D V
Sbjct: 195 DSEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVKVGDKV 232
Score = 110 (43.8 bits), Expect = 3.9e-22, Sum P(2) = 3.9e-22
Identities = 72/322 (22%), Positives = 129/322 (40%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ E I++ VP +S PLQ I Y Y G I R+++G +K + D V M
Sbjct: 181 ILEQIVEKVPAPTGDSEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVK-VGDKVRMMATG- 238
Query: 1163 KPNKAKINQIRVF--KGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDPSKPNGLP 1216
+ ++ ++ VF K R +E GD+ L I+ + +G TI +P P
Sbjct: 239 --KEFEVTEVGVFTPKTTQR---DELTVGDVGFLAASIKNVGDTRVGDTITHAKRPAAEP 293
Query: 1217 MLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSI-- 1274
+ + +N MV ++ R +L+ N+ L + + ++
Sbjct: 294 LAGYRK----LNPMVFCGLYPIDSARYNDLRDALEKLE---LNDSALEF-EPETSQALGF 345
Query: 1275 -YEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKTL--NGE---------------- 1314
+ G LH+ IL E + RE +L + P VI+K NGE
Sbjct: 346 GFRCGFLGLLHMEILQERIEREFKIDLITTAPSVIYKVFLTNGEDMIVDNPSNMPDPQTI 405
Query: 1315 --LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI-GFQ 1371
+ EP+ + + G +M+ + G +++ ++ RV L Y IP ++ F
Sbjct: 406 DRVEEPFVKAAIMVPNDYVGAVMEICQGKRGTFIDMQYLDETRVTLTYEIPLSEIVYDFF 465
Query: 1372 NEFITLTRGTGLISHVFEEYAP 1393
++ + T+G + Y P
Sbjct: 466 DQLKSNTKGYASFDYELIGYKP 487
Score = 65 (27.9 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 58 NKNITAESLVRAPIVTIMGHVDHGKTSLLDYI-RKTNVV 95
NK A+ + +I+ H+DHGK++L D I KTN +
Sbjct: 2 NKEERAKRQSKIRNFSIIAHIDHGKSTLADRILEKTNAL 40
Score = 55 (24.4 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 27/97 (27%), Positives = 44/97 (45%)
Query: 311 KVPFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKNLLII 370
++P S E ++ ++ K+ G F D +L K K M +N E+V L I
Sbjct: 454 EIPLS-EIVYDFFDQLKSNTKGY---ASF-DYELIGYKPSKLVKMDILLNSEQVDALSFI 508
Query: 371 IKTD-VYGSREVLTESLKNLSTDKVKIQV-IHNAVGN 405
+ D Y +V+ E LK L + + +V I +GN
Sbjct: 509 VHRDSAYDRGKVIVEKLKEL-IPRQQFEVPIQATIGN 544
>UNIPROTKB|E1C8K7 [details] [associations]
symbol:EIF5B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
InterPro:IPR009000 SUPFAM:SSF50447 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 GeneTree:ENSGT00690000102102
EMBL:AADN02017695 EMBL:AADN02017696 IPI:IPI00591303
Ensembl:ENSGALT00000036588 ArrayExpress:E1C8K7 Uniprot:E1C8K7
Length = 1220
Score = 160 (61.4 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 56 EYNKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNV 111
E +KN E L RAP++ ++GHVD GKT +LD +R T+V SEAGGITQ IGA NV
Sbjct: 619 ENSKNANTEKL-RAPVICVLGHVDTGKTKILDKLRHTHVQDSEAGGITQQIGATNV 673
Score = 151 (58.2 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGHE+F+ +R RG+ + DI +LVV G+ PQT E+I K P IVA+NKID+
Sbjct: 701 IDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDR 760
Query: 181 L 181
L
Sbjct: 761 L 761
Score = 98 (39.6 bits), Expect = 4.7e-22, Sum P(3) = 4.7e-22
Identities = 65/250 (26%), Positives = 109/250 (43%)
Query: 208 FISI---SAKTGVGINKLLEN-ISLQAEILELKAPVTTPAKGVIIESRLDKGKGPVATVL 263
F+S+ SA TG G+ L+ + L +L + + ++E + G G V+
Sbjct: 817 FVSLVPTSAHTGDGMGSLIALLVELTQTMLTKRLAECQELRAQVMEVKALPGMGTTIDVI 876
Query: 264 IQSGTLRCSD-IVVAGAS---YGRIRSML-----NE-NGKNILEAGPSIPVEIQGLTKVP 313
+ +G LR D I+V G +IR +L E KN E + V QG V
Sbjct: 877 LINGRLREGDTIIVPGVEGPIVTQIRGLLLPPPMKELRVKNQYEKHKEV-VAAQG---VK 932
Query: 314 FSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKL-HKTENMFNDINKEKVKNLLIIIK 372
G++L EK + L K +V + K +L H+ + N I E+ K + ++
Sbjct: 933 ILGKDL-----EKTLAGLPLLVAHKEDEVPVLKDELIHELKQTLNAIKLEE-KG--VYVQ 984
Query: 373 TDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIA------SKAIIIGFNV 426
GS E L E LK T +V I+ +G +++ D+ A A+I+ F+V
Sbjct: 985 ASTLGSLEALLEFLK---TSEVPYAGIN--IGPVHKKDVMKASVMLEHDPQYAVILAFDV 1039
Query: 427 RADASTRKLA 436
R + +++A
Sbjct: 1040 RIERDAQEMA 1049
Score = 43 (20.2 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 18/85 (21%), Positives = 39/85 (45%)
Query: 293 KNILEAGPSIPVEIQGL-TKVPFSGEELFVILNEKKAREIGLF-RQGKFRDV---KLSKQ 347
KN ++ G +EI +V G+E+ V + ++ R + D+ K+S+Q
Sbjct: 1130 KNFVDIGIVTSIEINHKPVEVAKKGQEVCVKIEPIPGESPKMYGRHFEATDILVSKISRQ 1189
Query: 348 KLHKTENMFNDINKEKVKNLLIIIK 372
+ ++ F D ++ L++ +K
Sbjct: 1190 SIDALKDWFRDEMQKSDWQLIVELK 1214
>UNIPROTKB|E1BVP1 [details] [associations]
symbol:EIF5B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
InterPro:IPR009000 SUPFAM:SSF50447 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 OMA:VMGVIVE
GeneTree:ENSGT00690000102102 EMBL:AADN02017695 EMBL:AADN02017696
IPI:IPI00821637 Ensembl:ENSGALT00000027066 ArrayExpress:E1BVP1
Uniprot:E1BVP1
Length = 1226
Score = 160 (61.4 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 33/56 (58%), Positives = 41/56 (73%)
Query: 56 EYNKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNV 111
E +KN E L RAP++ ++GHVD GKT +LD +R T+V SEAGGITQ IGA NV
Sbjct: 625 ENSKNANTEKL-RAPVICVLGHVDTGKTKILDKLRHTHVQDSEAGGITQQIGATNV 679
Score = 151 (58.2 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGHE+F+ +R RG+ + DI +LVV G+ PQT E+I K P IVA+NKID+
Sbjct: 707 IDTPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINLLKSKKCPFIVALNKIDR 766
Query: 181 L 181
L
Sbjct: 767 L 767
Score = 98 (39.6 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 65/250 (26%), Positives = 109/250 (43%)
Query: 208 FISI---SAKTGVGINKLLEN-ISLQAEILELKAPVTTPAKGVIIESRLDKGKGPVATVL 263
F+S+ SA TG G+ L+ + L +L + + ++E + G G V+
Sbjct: 823 FVSLVPTSAHTGDGMGSLIALLVELTQTMLTKRLAECQELRAQVMEVKALPGMGTTIDVI 882
Query: 264 IQSGTLRCSD-IVVAGAS---YGRIRSML-----NE-NGKNILEAGPSIPVEIQGLTKVP 313
+ +G LR D I+V G +IR +L E KN E + V QG V
Sbjct: 883 LINGRLREGDTIIVPGVEGPIVTQIRGLLLPPPMKELRVKNQYEKHKEV-VAAQG---VK 938
Query: 314 FSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQKL-HKTENMFNDINKEKVKNLLIIIK 372
G++L EK + L K +V + K +L H+ + N I E+ K + ++
Sbjct: 939 ILGKDL-----EKTLAGLPLLVAHKEDEVPVLKDELIHELKQTLNAIKLEE-KG--VYVQ 990
Query: 373 TDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIA------SKAIIIGFNV 426
GS E L E LK T +V I+ +G +++ D+ A A+I+ F+V
Sbjct: 991 ASTLGSLEALLEFLK---TSEVPYAGIN--IGPVHKKDVMKASVMLEHDPQYAVILAFDV 1045
Query: 427 RADASTRKLA 436
R + +++A
Sbjct: 1046 RIERDAQEMA 1055
Score = 43 (20.2 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 18/85 (21%), Positives = 39/85 (45%)
Query: 293 KNILEAGPSIPVEIQGL-TKVPFSGEELFVILNEKKAREIGLF-RQGKFRDV---KLSKQ 347
KN ++ G +EI +V G+E+ V + ++ R + D+ K+S+Q
Sbjct: 1136 KNFVDIGIVTSIEINHKPVEVAKKGQEVCVKIEPIPGESPKMYGRHFEATDILVSKISRQ 1195
Query: 348 KLHKTENMFNDINKEKVKNLLIIIK 372
+ ++ F D ++ L++ +K
Sbjct: 1196 SIDALKDWFRDEMQKSDWQLIVELK 1220
>UNIPROTKB|A7RR04 [details] [associations]
symbol:v1g236547 "Elongation factor G, mitochondrial"
species:45351 "Nematostella vectensis" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484 OMA:QEPGKGY
GO:GO:0070125 EMBL:DS469530 RefSeq:XP_001638091.1 UniGene:Nve.12467
ProteinModelPortal:A7RR04 STRING:A7RR04
EnsemblMetazoa:NEMVEDRAFT_v1g236547-RA GeneID:5518112
KEGG:nve:NEMVE_v1g236547 Uniprot:A7RR04
Length = 735
Score = 235 (87.8 bits), Expect = 4.9e-22, Sum P(4) = 4.9e-22
Identities = 63/159 (39%), Positives = 83/159 (52%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKNCSI 980
I AH+D GKTTL + LL +G + N+ A MDS E+E++RGITI S +
Sbjct: 45 ISAHIDSGKTTLTERLLFYTGRISHMHEVKGKDNVGAT-MDSMELERQRGITIQSAATYV 103
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 104 NWKDHNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPC 163
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
I +NK+DR A V+ L KL L PV
Sbjct: 164 IAFINKLDRMGANHNRVLS---QLRAKLNHNAALLQLPV 199
Score = 132 (51.5 bits), Expect = 4.9e-11, Sum P(5) = 4.9e-11
Identities = 35/92 (38%), Positives = 44/92 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A V +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 93 GITIQSAATYVNWKDHNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTV 152
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDL 192
K VP I INK+D++ N +R+ L
Sbjct: 153 NRQMKRYNVPCIAFINKLDRMGANHNRVLSQL 184
Score = 92 (37.4 bits), Expect = 4.9e-22, Sum P(4) = 4.9e-22
Identities = 54/193 (27%), Positives = 82/193 (42%)
Query: 1129 LEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQI-RVFKGLDRVLVNEAL 1187
LE Y G++ R+ G +K + I+N K + K+ +I R+ + + E
Sbjct: 350 LEAGRY-GQLTYLRVYQGALK--RGGFIVNTRTGK--RVKVPRIVRMHSDIMED-IQEGY 403
Query: 1188 SGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGREGKFIT 1245
+GDI + GIE C G T P + + + EP +++ N + K I
Sbjct: 404 AGDICALFGIE--CASGDTFTAEGAPLVSMESIFVPEPVISLAVEPKNKNDLDQFSKAI- 460
Query: 1246 TRQIKNRLDHEIKNNIGLRVTQNKHDDSIYE--VSGRGELHLTILIENMRREGYELSV-- 1301
NR E RV + DD E +SG GELHL + E MR E Y V
Sbjct: 461 -----NRFTREDPT---FRV---RFDDESKETIISGMGELHLDVYTERMRLE-YNCPVIC 508
Query: 1302 SRPRVIFKTLNGE 1314
+P+V F+ G+
Sbjct: 509 GKPKVAFRETIGK 521
Score = 72 (30.4 bits), Expect = 4.9e-22, Sum P(4) = 4.9e-22
Identities = 22/93 (23%), Positives = 42/93 (45%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
+ EP ++ V+ + QG ++ +N R G + + NE L +P + G+ E
Sbjct: 635 ILEPIMSVEVNAPQEFQGTVIAGVNRRHGQVTGTDANEGY-FTLFAEVPLNDMFGYATEL 693
Query: 1375 ITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRN 1407
+ T+G G + + Y P + + +L R N
Sbjct: 694 RSQTQGKGEFTMEYCRYLPALAQVQAELMDRFN 726
Score = 42 (19.8 bits), Expect = 4.9e-22, Sum P(4) = 4.9e-22
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 72 VTIMGHVDHGKTSLLD 87
+ I H+D GKT+L +
Sbjct: 43 IGISAHIDSGKTTLTE 58
Score = 41 (19.5 bits), Expect = 4.9e-11, Sum P(5) = 4.9e-11
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 663 HGVLLLDKPYGLSSNN 678
H LL P GL NN
Sbjct: 190 HNAALLQLPVGLEGNN 205
Score = 38 (18.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 1354 ERVRLEYRIP 1363
ER+RLEY P
Sbjct: 496 ERMRLEYNCP 505
>UNIPROTKB|B0WGM1 [details] [associations]
symbol:CPIJ005834 "Elongation factor G, mitochondrial"
species:7176 "Culex quinquefasciatus" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484 OMA:QEPGKGY
OrthoDB:EOG40CFXZ GO:GO:0070125 EMBL:DS231927 RefSeq:XP_001847855.1
UniGene:Cpi.12418 ProteinModelPortal:B0WGM1 STRING:B0WGM1
EnsemblMetazoa:CPIJ801426-RA GeneID:6038008
KEGG:cqu:CpipJ_CPIJ005834 VectorBase:CPIJ005834 PhylomeDB:B0WGM1
Uniprot:B0WGM1
Length = 744
Score = 235 (87.8 bits), Expect = 5.3e-22, Sum P(4) = 5.3e-22
Identities = 61/172 (35%), Positives = 93/172 (54%)
Query: 895 IIYLSDLLSKRFL-HGQNLFLSD----ENIYI-LIKS-AIIAHVDHGKTTLIDHLLRQSG 947
++ + L+K F +GQ F S E+ + I++ I AH+D GKTTL + +L +G
Sbjct: 6 LLRIRPALAKSFFENGQRAFASHAAFAEHAKLERIRNIGISAHIDSGKTTLTERILFYTG 65
Query: 948 TFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEV 1002
++ + + MDS E+E++RGITI S + INIIDTPGH DF EV
Sbjct: 66 RIKEMHEVKGKDNVGATMDSMELERQRGITIQSAATYTVWKDHNINIIDTPGHVDFTVEV 125
Query: 1003 ERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARP 1054
ER L ++D +L++ +V G QT V R+ + + +NK+DR A P
Sbjct: 126 ERALRVLDGAVLVLCSVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRMGANP 177
Score = 131 (51.2 bits), Expect = 1.9e-12, Sum P(5) = 1.9e-12
Identities = 34/89 (38%), Positives = 45/89 (50%)
Query: 101 GIT-QHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTRE 159
GIT Q Y V +H +I +DTPGH FT R +V D VLV+ + GV QT
Sbjct: 93 GITIQSAATYTVWKDH-NINIIDTPGHVDFTVEVERALRVLDGAVLVLCSVGGVQSQTLT 151
Query: 160 AIAHAKISGVPLIVAINKIDKLDINLDRI 188
K VP + INK+D++ N R+
Sbjct: 152 VNRQMKRYNVPCLAFINKLDRMGANPYRV 180
Score = 87 (35.7 bits), Expect = 5.3e-22, Sum P(4) = 5.3e-22
Identities = 35/132 (26%), Positives = 59/132 (44%)
Query: 1183 VNEALSGDIVLITGIEEICI-GST-ICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T + DP + + + +P +++ N+
Sbjct: 401 VNEVYAGDIFALFGVD--CASGDTFVTDPKLELSMESIFVPDPVVSMAIKPTNTKDRDNF 458
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYE--VSGRGELHLTILIENMRRE-GY 1297
K + R K + R +D + E VSG GELHL I + M RE
Sbjct: 459 SKAVA------RFT---KEDPTFRFA---YDPDVKETLVSGMGELHLEIYAQRMEREYNC 506
Query: 1298 ELSVSRPRVIFK 1309
+++ +P+V F+
Sbjct: 507 PVTLGKPKVAFR 518
Score = 78 (32.5 bits), Expect = 5.3e-22, Sum P(4) = 5.3e-22
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG ++ +LN R G + E E + +P
Sbjct: 629 VFENGSWQILEPVMMVEVTAPEEFQGTVIGQLNKRHGIITGTEGTEGW-FTIYAEVPLND 687
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G S + Y+P
Sbjct: 688 MFGYAGELRSSTQGKGEFSMEYSRYSP 714
Score = 53 (23.7 bits), Expect = 1.9e-12, Sum P(5) = 1.9e-12
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 1006 LSMVDNVL--LLIDAVEGPMPQTRF--VTRKALKLGFKPIVVVNKIDRSNARPEWVVDAT 1061
LS VD+ + L ++ + P PQ + R LK F P++V + +P ++DA
Sbjct: 251 LSNVDDAIGELFLEE-KTPTPQDLMGAIRRSTLKRTFTPVLVGTALKNKGVQP--LLDAV 307
Query: 1062 FD 1063
D
Sbjct: 308 LD 309
Score = 45 (20.9 bits), Expect = 1.9e-12, Sum P(5) = 1.9e-12
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 66 LVRAPIVTIMGHVDHGKTSLLDYI 89
L R + I H+D GKT+L + I
Sbjct: 37 LERIRNIGISAHIDSGKTTLTERI 60
Score = 41 (19.5 bits), Expect = 5.3e-22, Sum P(4) = 5.3e-22
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP 1112
+T L G A +N K Q PL +A+L Y+P
Sbjct: 286 FTPVLVGTALKN-KGVQ----PLLDAVLDYLP 312
>UNIPROTKB|Q83BK3 [details] [associations]
symbol:lepA "Elongation factor 4" species:227377 "Coxiella
burnetii RSA 493" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:NP_820488.1 ProteinModelPortal:Q83BK3
SMR:Q83BK3 PRIDE:Q83BK3 GeneID:1209415 KEGG:cbu:CBU_1505
PATRIC:17931775 BioCyc:CBUR227377:GJ7S-1490-MONOMER Uniprot:Q83BK3
Length = 602
Score = 252 (93.8 bits), Expect = 6.5e-22, Sum P(2) = 6.5e-22
Identities = 54/144 (37%), Positives = 86/144 (59%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+IIAH+DHGK+TL D ++ G + + + A+++DS +IE+ERGITI +++ ++ +
Sbjct: 13 SIIAHIDHGKSTLADRFIQLCGGLSERE-MKAQVLDSMDIERERGITIKAQSVTLNFKSQ 71
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
++N IDTPGH DF EV R L+ + LL++DA +G QT A++ G
Sbjct: 72 DGHFYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVATCYTAIEQGLVV 131
Query: 1041 IVVVNKIDRSNARPEWVVDATFDL 1064
+ V+NKID A PE + D+
Sbjct: 132 LPVLNKIDLPQADPERAIQEIEDV 155
Score = 168 (64.2 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 55/170 (32%), Positives = 85/170 (50%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ F+DTPGH F+ +R + +LVV A GV QT A G+ ++ +NK
Sbjct: 78 LNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVATCYTAIEQGLVVLPVLNK 137
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + +R Q++ E VI E A I +SAK G G+ +LLE + ++ +
Sbjct: 138 IDLPQADPERAIQEI--EDVIGIE---AHDAIRVSAKEGRGVKELLEQL-----VVAIPP 187
Query: 238 PV---TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD---IVVAGASY 281
PV P + +II+S D G V+ V +++GTLR D ++ G Y
Sbjct: 188 PVGDPEAPLQALIIDSWFDSYLGVVSLVRVKAGTLRKGDKIRVMSTGKDY 237
Score = 92 (37.4 bits), Expect = 6.5e-22, Sum P(2) = 6.5e-22
Identities = 73/327 (22%), Positives = 136/327 (41%)
Query: 1095 ARQGNMIP-LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A++G + L E ++ +P + PLQ II + SYLG + + R+ +G ++
Sbjct: 168 AKEGRGVKELLEQLVVAIPPPVGDPEAPLQALIIDSWFDSYLGVVSLVRVKAGTLRKGDK 227
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIV--LITGIEEIC---IGSTICD 1208
+ +M+ D +QI F + L E LS V ++ GI++I +G T+
Sbjct: 228 IRVMSTGKDY----YADQIGHFTPKRQPL--EELSAGAVGFVVAGIKDIFGAPVGDTLTH 281
Query: 1209 PSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQN 1268
+ G P+ + + P+ E + K RL N+ L +
Sbjct: 282 AKQSAGSPLPGFKQVKPQV--FAGLFPINSEEYEPFREALAKLRL-----NDAAL-FYEP 333
Query: 1269 KHDDSI---YEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKTL--NGE-LYEPYEN 1321
+ +++ + G LH+ I+ E + RE EL + P V ++ L GE LY +
Sbjct: 334 ESSEALGFGFRCGFLGMLHMEIVQERLEREYNLELITTAPTVSYEILAKQGEMLYVDNPS 393
Query: 1322 LFVD---IEEINQGIIMQKL----NYRGGDLKN-IE---INEK-----ERVRLEYRIP-S 1364
+ I EI + I + + Y G + +E + +K +V + Y IP S
Sbjct: 394 HLPEPGKIGEIREPIAVANILVPPTYLGAVITLCVEKRGVQKKLLYLSNQVSMTYEIPLS 453
Query: 1365 RGLIGFQNEFITLTRGTGLISHVFEEY 1391
++ F + + +RG + + F +
Sbjct: 454 EVVLDFFDRLKSASRGYASLDYSFNHF 480
Score = 53 (23.7 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ H+DHGK++L D
Sbjct: 13 SIIAHIDHGKSTLAD 27
Score = 40 (19.1 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 8/39 (20%), Positives = 19/39 (48%)
Query: 498 GLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAG 536
G +R+ KIR++ + ++ + ++E+ AG
Sbjct: 220 GTLRKGDKIRVMSTGKDYYADQIGHFTPKRQPLEELSAG 258
>TIGR_CMR|CBU_1505 [details] [associations]
symbol:CBU_1505 "GTP-binding protein LepA" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0005525 "GTP binding" evidence=ISS] HAMAP:MF_00071
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412 GO:GO:0003924
GO:GO:0006184 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:NP_820488.1 ProteinModelPortal:Q83BK3
SMR:Q83BK3 PRIDE:Q83BK3 GeneID:1209415 KEGG:cbu:CBU_1505
PATRIC:17931775 BioCyc:CBUR227377:GJ7S-1490-MONOMER Uniprot:Q83BK3
Length = 602
Score = 252 (93.8 bits), Expect = 6.5e-22, Sum P(2) = 6.5e-22
Identities = 54/144 (37%), Positives = 86/144 (59%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+IIAH+DHGK+TL D ++ G + + + A+++DS +IE+ERGITI +++ ++ +
Sbjct: 13 SIIAHIDHGKSTLADRFIQLCGGLSERE-MKAQVLDSMDIERERGITIKAQSVTLNFKSQ 71
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
++N IDTPGH DF EV R L+ + LL++DA +G QT A++ G
Sbjct: 72 DGHFYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVATCYTAIEQGLVV 131
Query: 1041 IVVVNKIDRSNARPEWVVDATFDL 1064
+ V+NKID A PE + D+
Sbjct: 132 LPVLNKIDLPQADPERAIQEIEDV 155
Score = 168 (64.2 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 55/170 (32%), Positives = 85/170 (50%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ F+DTPGH F+ +R + +LVV A GV QT A G+ ++ +NK
Sbjct: 78 LNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQTVATCYTAIEQGLVVLPVLNK 137
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + +R Q++ E VI E A I +SAK G G+ +LLE + ++ +
Sbjct: 138 IDLPQADPERAIQEI--EDVIGIE---AHDAIRVSAKEGRGVKELLEQL-----VVAIPP 187
Query: 238 PV---TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD---IVVAGASY 281
PV P + +II+S D G V+ V +++GTLR D ++ G Y
Sbjct: 188 PVGDPEAPLQALIIDSWFDSYLGVVSLVRVKAGTLRKGDKIRVMSTGKDY 237
Score = 92 (37.4 bits), Expect = 6.5e-22, Sum P(2) = 6.5e-22
Identities = 73/327 (22%), Positives = 136/327 (41%)
Query: 1095 ARQGNMIP-LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A++G + L E ++ +P + PLQ II + SYLG + + R+ +G ++
Sbjct: 168 AKEGRGVKELLEQLVVAIPPPVGDPEAPLQALIIDSWFDSYLGVVSLVRVKAGTLRKGDK 227
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIV--LITGIEEIC---IGSTICD 1208
+ +M+ D +QI F + L E LS V ++ GI++I +G T+
Sbjct: 228 IRVMSTGKDY----YADQIGHFTPKRQPL--EELSAGAVGFVVAGIKDIFGAPVGDTLTH 281
Query: 1209 PSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQN 1268
+ G P+ + + P+ E + K RL N+ L +
Sbjct: 282 AKQSAGSPLPGFKQVKPQV--FAGLFPINSEEYEPFREALAKLRL-----NDAAL-FYEP 333
Query: 1269 KHDDSI---YEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKTL--NGE-LYEPYEN 1321
+ +++ + G LH+ I+ E + RE EL + P V ++ L GE LY +
Sbjct: 334 ESSEALGFGFRCGFLGMLHMEIVQERLEREYNLELITTAPTVSYEILAKQGEMLYVDNPS 393
Query: 1322 LFVD---IEEINQGIIMQKL----NYRGGDLKN-IE---INEK-----ERVRLEYRIP-S 1364
+ I EI + I + + Y G + +E + +K +V + Y IP S
Sbjct: 394 HLPEPGKIGEIREPIAVANILVPPTYLGAVITLCVEKRGVQKKLLYLSNQVSMTYEIPLS 453
Query: 1365 RGLIGFQNEFITLTRGTGLISHVFEEY 1391
++ F + + +RG + + F +
Sbjct: 454 EVVLDFFDRLKSASRGYASLDYSFNHF 480
Score = 53 (23.7 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ H+DHGK++L D
Sbjct: 13 SIIAHIDHGKSTLAD 27
Score = 40 (19.1 bits), Expect = 3.2e-08, Sum P(3) = 3.2e-08
Identities = 8/39 (20%), Positives = 19/39 (48%)
Query: 498 GLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAG 536
G +R+ KIR++ + ++ + ++E+ AG
Sbjct: 220 GTLRKGDKIRVMSTGKDYYADQIGHFTPKRQPLEELSAG 258
>GENEDB_PFALCIPARUM|PF13_0069 [details] [associations]
symbol:PF13_0069 "translation initiation factor
if-2, putative" species:5833 "Plasmodium falciparum" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000795
InterPro:IPR005225 Pfam:PF00009 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0003743 EMBL:AL844509
InterPro:IPR009000 SUPFAM:SSF50447 HSSP:O26359 Gene3D:3.40.50.10050
InterPro:IPR023115 Pfam:PF11987 SUPFAM:SSF52156
RefSeq:XP_001349852.1 ProteinModelPortal:Q8IEJ7
EnsemblProtists:PF13_0069:mRNA GeneID:814047 KEGG:pfa:PF13_0069
EuPathDB:PlasmoDB:PF3D7_1312400 HOGENOM:HOG000280826 OMA:VVHAEVE
ProtClustDB:CLSZ2433386 Uniprot:Q8IEJ7
Length = 1128
Score = 263 (97.6 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 62/187 (33%), Positives = 101/187 (54%)
Query: 58 NKNITAESLVRA-PIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHG 116
NK I E +++++GH++HGKT+LLD I N+ +EAG ITQ+I +
Sbjct: 200 NKKINDEKKKNYYTVISVIGHINHGKTTLLDKITNNNLALNEAGCITQNIKPIHFEYAPF 259
Query: 117 SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
TFLDTPGH+ F R R A ++DI++++++ + G QT EAI +A +P+I +N
Sbjct: 260 KFTFLDTPGHKVFQIFRGRAAFLSDILIILISLEVGAEIQTEEAIKYADKFDIPVIFVLN 319
Query: 177 KIDKLDINLDRIKQDL-------ISEQVIPEEYGGA-SPFISISAKTGVGINKLLENISL 228
K D N +K +L EQ++ + I+IS+ TG ++KL+ I
Sbjct: 320 KADIYGSNESIVKAELKNQCRKMYDEQILKHNFSNEIDKAITISSLTGYNLHKLINRIYF 379
Query: 229 QAEILEL 235
++ + L
Sbjct: 380 LSQHMNL 386
Score = 97 (39.2 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 36/165 (21%), Positives = 79/165 (47%)
Query: 245 GVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSM--LNENGK-NILEAGPS 301
G++++ + KG + V+I++G + + G++YGRI+ M N N K N A
Sbjct: 476 GIVVDISKNSSKGTILNVIIRNGFFIEGNYFICGSAYGRIQKMYKFNTNFKENCTYASVG 535
Query: 302 IPVEIQGLTKVP-FSGEELFVILNEKKAREIGLFRQ--GKFRDVKLSKQKLHKTENMFND 358
+ ++I G+ K + ++L L + A + +R K +++S +++ + + ND
Sbjct: 536 MAIQIAGIRKYGNATTDDLIFTLPQNNAFRLCQYRLMVEKLSTLQVSGKEI--SVSWEND 593
Query: 359 INKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAV 403
+ K + D+Y +R +++ K + V+ + I N +
Sbjct: 594 MKKNEYH------AEDIYENRLEMSDKRKAIEEFGVQNEPIFNDI 632
Score = 83 (34.3 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 352 TENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTD-KVKIQVIHNAVGNINESD 410
T++ FN + K+ + III+T+ G ++ + +NL VKI V+H +G I +D
Sbjct: 991 TDDKFN-LPKKNCPVIPIIIRTNYVGIFDIFLDEFENLQKKYNVKISVVHGGIGPITPND 1049
Query: 411 I 411
+
Sbjct: 1050 V 1050
Score = 45 (20.9 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 954 NINARIMDSNEIEKERGITIFSKNCSIEYNGTRINI 989
NIN ++SN I+ KN I N INI
Sbjct: 390 NINNDNINSNNIDNNLAYESMKKNFLIPQNKDDINI 425
Score = 44 (20.5 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 1210 SKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQ---IK-NRLDHEIKNNIG--L 1263
S+ LP NI+ + N + NN + F+ + I N LD+ NN +
Sbjct: 381 SQHMNLPYNNINNDNINSNNIDNNLAYESMKKNFLIPQNKDDININHLDNNDNNNNNNNI 440
Query: 1264 RVTQNK--HDDS 1273
+++N HD+S
Sbjct: 441 HLSKNNPTHDNS 452
Score = 42 (19.8 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLD-HEIKNNIGLRVTQNKHDDSIYEVS 1278
D T NN E + K L+ + ++ I R +NK+ +IY+++
Sbjct: 801 DNETNEAQVNTNNIYNINNEENSTNSNSYKEYLETYNVETTIPRRGRKNKYSKNIYKIN 859
Score = 42 (19.8 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 17/42 (40%), Positives = 18/42 (42%)
Query: 581 SYAKIFFTTFNKD-ISIKNILDNLSKAKNYIRFKLSKKLHIH 621
S K F NKD I+I N LDN N LSK H
Sbjct: 409 SMKKNFLIPQNKDDINI-NHLDNNDNNNNNNNIHLSKNNPTH 449
Score = 41 (19.5 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 342 VKLSK-QKLHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKV 394
+K SK +++H +++ I+ N I+ T + E + E + ++ TDK+
Sbjct: 697 LKTSKNEEMHVSKHA--QISSLNNTNEAILNDTQMCQQNEQMKEEMDSIYTDKI 748
>UNIPROTKB|Q8IEJ7 [details] [associations]
symbol:PF13_0069 "Translation initiation factor IF-2,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000795
InterPro:IPR005225 Pfam:PF00009 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0003743 EMBL:AL844509
InterPro:IPR009000 SUPFAM:SSF50447 HSSP:O26359 Gene3D:3.40.50.10050
InterPro:IPR023115 Pfam:PF11987 SUPFAM:SSF52156
RefSeq:XP_001349852.1 ProteinModelPortal:Q8IEJ7
EnsemblProtists:PF13_0069:mRNA GeneID:814047 KEGG:pfa:PF13_0069
EuPathDB:PlasmoDB:PF3D7_1312400 HOGENOM:HOG000280826 OMA:VVHAEVE
ProtClustDB:CLSZ2433386 Uniprot:Q8IEJ7
Length = 1128
Score = 263 (97.6 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 62/187 (33%), Positives = 101/187 (54%)
Query: 58 NKNITAESLVRA-PIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHG 116
NK I E +++++GH++HGKT+LLD I N+ +EAG ITQ+I +
Sbjct: 200 NKKINDEKKKNYYTVISVIGHINHGKTTLLDKITNNNLALNEAGCITQNIKPIHFEYAPF 259
Query: 117 SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
TFLDTPGH+ F R R A ++DI++++++ + G QT EAI +A +P+I +N
Sbjct: 260 KFTFLDTPGHKVFQIFRGRAAFLSDILIILISLEVGAEIQTEEAIKYADKFDIPVIFVLN 319
Query: 177 KIDKLDINLDRIKQDL-------ISEQVIPEEYGGA-SPFISISAKTGVGINKLLENISL 228
K D N +K +L EQ++ + I+IS+ TG ++KL+ I
Sbjct: 320 KADIYGSNESIVKAELKNQCRKMYDEQILKHNFSNEIDKAITISSLTGYNLHKLINRIYF 379
Query: 229 QAEILEL 235
++ + L
Sbjct: 380 LSQHMNL 386
Score = 97 (39.2 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 36/165 (21%), Positives = 79/165 (47%)
Query: 245 GVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSM--LNENGK-NILEAGPS 301
G++++ + KG + V+I++G + + G++YGRI+ M N N K N A
Sbjct: 476 GIVVDISKNSSKGTILNVIIRNGFFIEGNYFICGSAYGRIQKMYKFNTNFKENCTYASVG 535
Query: 302 IPVEIQGLTKVP-FSGEELFVILNEKKAREIGLFRQ--GKFRDVKLSKQKLHKTENMFND 358
+ ++I G+ K + ++L L + A + +R K +++S +++ + + ND
Sbjct: 536 MAIQIAGIRKYGNATTDDLIFTLPQNNAFRLCQYRLMVEKLSTLQVSGKEI--SVSWEND 593
Query: 359 INKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAV 403
+ K + D+Y +R +++ K + V+ + I N +
Sbjct: 594 MKKNEYH------AEDIYENRLEMSDKRKAIEEFGVQNEPIFNDI 632
Score = 83 (34.3 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 352 TENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTD-KVKIQVIHNAVGNINESD 410
T++ FN + K+ + III+T+ G ++ + +NL VKI V+H +G I +D
Sbjct: 991 TDDKFN-LPKKNCPVIPIIIRTNYVGIFDIFLDEFENLQKKYNVKISVVHGGIGPITPND 1049
Query: 411 I 411
+
Sbjct: 1050 V 1050
Score = 45 (20.9 bits), Expect = 1.8e-16, Sum P(3) = 1.8e-16
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 954 NINARIMDSNEIEKERGITIFSKNCSIEYNGTRINI 989
NIN ++SN I+ KN I N INI
Sbjct: 390 NINNDNINSNNIDNNLAYESMKKNFLIPQNKDDINI 425
Score = 44 (20.5 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 19/72 (26%), Positives = 32/72 (44%)
Query: 1210 SKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQ---IK-NRLDHEIKNNIG--L 1263
S+ LP NI+ + N + NN + F+ + I N LD+ NN +
Sbjct: 381 SQHMNLPYNNINNDNINSNNIDNNLAYESMKKNFLIPQNKDDININHLDNNDNNNNNNNI 440
Query: 1264 RVTQNK--HDDS 1273
+++N HD+S
Sbjct: 441 HLSKNNPTHDNS 452
Score = 42 (19.8 bits), Expect = 8.1e-22, Sum P(3) = 8.1e-22
Identities = 13/59 (22%), Positives = 24/59 (40%)
Query: 1221 DEPTLTINFMVNNSPLAGREGKFITTRQIKNRLD-HEIKNNIGLRVTQNKHDDSIYEVS 1278
D T NN E + K L+ + ++ I R +NK+ +IY+++
Sbjct: 801 DNETNEAQVNTNNIYNINNEENSTNSNSYKEYLETYNVETTIPRRGRKNKYSKNIYKIN 859
Score = 42 (19.8 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 17/42 (40%), Positives = 18/42 (42%)
Query: 581 SYAKIFFTTFNKD-ISIKNILDNLSKAKNYIRFKLSKKLHIH 621
S K F NKD I+I N LDN N LSK H
Sbjct: 409 SMKKNFLIPQNKDDINI-NHLDNNDNNNNNNNIHLSKNNPTH 449
Score = 41 (19.5 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 342 VKLSK-QKLHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKV 394
+K SK +++H +++ I+ N I+ T + E + E + ++ TDK+
Sbjct: 697 LKTSKNEEMHVSKHA--QISSLNNTNEAILNDTQMCQQNEQMKEEMDSIYTDKI 748
>UNIPROTKB|F1PF69 [details] [associations]
symbol:GUF1 "Translation factor GUF1, mitochondrial"
species:9615 "Canis lupus familiaris" [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743 GO:GO:0005759
GO:GO:0006412 GO:GO:0003924 GO:GO:0006184 GO:GO:0043022
GO:GO:0045727 Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393
GeneTree:ENSGT00550000074940 OMA:KCYGGDA EMBL:AAEX03009029
Ensembl:ENSCAFT00000002935 Uniprot:F1PF69
Length = 610
Score = 284 (105.0 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 66/146 (45%), Positives = 90/146 (61%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
+IIAHVDHGK+TL D LL +G K +N N +++D ++E+ERGIT+ ++ S+ YN
Sbjct: 13 SIIAHVDHGKSTLADRLLELTGAIDKTKN-NKQVLDKLQVERERGITVKAQTASLFYNCE 71
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G + +N+IDTPGH DF EV R LS VLL++DA EG QT A + I
Sbjct: 72 GKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQLSVI 131
Query: 1042 VVVNKIDRSNARPEWV---VDATFDL 1064
V+NKID NA PE V ++ FD+
Sbjct: 132 PVINKIDLKNADPERVEKQIEKVFDI 157
Score = 143 (55.4 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 45/169 (26%), Positives = 79/169 (46%)
Query: 109 YNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISG 168
YN + +DTPGH F+ +R V+LVV A++G+ QT A +
Sbjct: 68 YNCEGKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEGIQAQTVANFFLAFEAQ 127
Query: 169 VPLIVAINKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISL 228
+ +I INKID + + +R+++ + IP + I ISAK G + ++L+ +
Sbjct: 128 LSVIPVINKIDLKNADPERVEKQIEKVFDIPR-----NECIKISAKLGTNVERVLQAVI- 181
Query: 229 QAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVA 277
I K K ++ +S D+ +G +A V + G + D +V+
Sbjct: 182 -ERIPPPKVHRKNSLKALVFDSTFDQYRGVIANVALFDGMVSKGDKIVS 229
Score = 57 (25.1 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 26/135 (19%), Positives = 59/135 (43%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G N+ + +A+++ +P K + N L+ + + Y G I + G +
Sbjct: 167 AKLGTNVERVLQAVIERIPPPKVHRKNSLKALVFDSTFDQYRGVIANVALFDGMVSKGDK 226
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDP 1209
+V + ++N++ V ++ ++ +G + LI G++++ IG T+
Sbjct: 227 IVSAH----TKKTYEVNEVGVLNPNEQP-THKLYAGQVGYLIAGMKDVTEAQIGDTLYLH 281
Query: 1210 SKP-NGLPMLNIDEP 1223
+P LP +P
Sbjct: 282 KQPVEPLPGFKSAKP 296
Score = 54 (24.1 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ HVDHGK++L D
Sbjct: 13 SIIAHVDHGKSTLAD 27
Score = 43 (20.2 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI-GFQNEFITLTRG 1380
G +M R KN+ ++ RV L+Y P ++ F + +L+ G
Sbjct: 427 GKVMMLCQARRAVQKNMMYIDQNRVMLKYLFPLNEIVVDFYDSLKSLSSG 476
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 317 EELFVILNEKKAREIG 332
EEL I+++ KA +G
Sbjct: 505 EELVTIVHKDKAHSVG 520
>SGD|S000005659 [details] [associations]
symbol:EFT1 "Elongation factor 2 (EF-2), also encoded by
EFT2" species:4932 "Saccharomyces cerevisiae" [GO:0006412
"translation" evidence=IEA] [GO:0003746 "translation elongation
factor activity" evidence=IEA;TAS] [GO:0006414 "translational
elongation" evidence=IEA;TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005840 "ribosome" evidence=TAS] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345 SGD:S000002793
SGD:S000005659 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:BK006948 GO:GO:0003924
GO:GO:0006184 EMBL:BK006938 GO:GO:0003746 EMBL:U28373 EMBL:X90518
EMBL:X94335 GO:GO:0019843 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U32274 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 GeneTree:ENSGT00620000088029
HOGENOM:HOG000231589 KO:K03234 OMA:NRHNRFY OrthoDB:EOG4PZNFQ
EMBL:M59369 EMBL:M59370 EMBL:Z75041 EMBL:AY497635 PIR:A41778
RefSeq:NP_010673.1 RefSeq:NP_014776.1 PDB:1N0U PDB:1N0V PDB:1S1H
PDB:1U2R PDB:1ZM2 PDB:1ZM3 PDB:1ZM4 PDB:1ZM9 PDB:2E1R PDB:2NPF
PDB:2P8W PDB:2P8X PDB:2P8Y PDB:2P8Z PDB:2ZIT PDB:3B78 PDB:3B82
PDB:3B8H PDB:3DNY PDBsum:1N0U PDBsum:1N0V PDBsum:1S1H PDBsum:1U2R
PDBsum:1ZM2 PDBsum:1ZM3 PDBsum:1ZM4 PDBsum:1ZM9 PDBsum:2E1R
PDBsum:2NPF PDBsum:2P8W PDBsum:2P8X PDBsum:2P8Y PDBsum:2P8Z
PDBsum:2ZIT PDBsum:3B78 PDBsum:3B82 PDBsum:3B8H PDBsum:3DNY
ProteinModelPortal:P32324 SMR:P32324 DIP:DIP-4911N IntAct:P32324
MINT:MINT-516631 STRING:P32324 SWISS-2DPAGE:P32324 PaxDb:P32324
PRIDE:P32324 EnsemblFungi:YDR385W EnsemblFungi:YOR133W
GeneID:851993 GeneID:854301 KEGG:sce:YDR385W KEGG:sce:YOR133W
CYGD:YDR385w CYGD:YOR133w GeneTree:ENSGT00620000088065
ChEMBL:CHEMBL3376 EvolutionaryTrace:P32324 NextBio:970163
Genevestigator:P32324 GermOnline:YDR385W GermOnline:YOR133W
Uniprot:P32324
Length = 842
Score = 249 (92.7 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 66/175 (37%), Positives = 95/175 (54%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSI----- 980
++IAHVDHGK+TL D L++++G + AR D+ + E+ERGITI S S+
Sbjct: 23 SVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMS 82
Query: 981 -----------EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFV 1029
+ N IN+ID+PGH DF EV L + D L+++D +EG QT V
Sbjct: 83 DEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETV 142
Query: 1030 TRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSA 1084
R+AL KP+VV+NK+DR A E V DL+ T E ++ ++ T A
Sbjct: 143 LRQALGERIKPVVVINKVDR--ALLELQVSKE-DLYQTFARTVESVNV-IVSTYA 193
Score = 109 (43.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ +VTD ++VV +GV QT + A + +V INK
Sbjct: 100 INLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINK 159
Query: 178 IDKLDINLDRIKQDL 192
+D+ + L K+DL
Sbjct: 160 VDRALLELQVSKEDL 174
Score = 97 (39.2 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 51/205 (24%), Positives = 97/205 (47%)
Query: 1122 LQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMNGPDDKPNKAK---INQI-RVFK 1176
L L + + +S G+ GR+ +G +KS Q V I GP+ P K I I RV
Sbjct: 378 LMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQ-GPNYVPGKKDDLFIKAIQRVVL 436
Query: 1177 GLDRVL--VNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNID-EPTLTINFMVN 1232
+ R + +++ +G+I+ + GI++ + + T+ + + ++ P + + V
Sbjct: 437 MMGRFVEPIDDCPAGNIIGLVGIDQFLLKTGTLTTSETAHNMKVMKFSVSPVVQVAVEVK 496
Query: 1233 NSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENM 1292
N A K + +K RL K++ + ++ + I V+G GELHL I ++++
Sbjct: 497 N---ANDLPKLV--EGLK-RLS---KSDPCVLTYMSESGEHI--VAGTGELHLEICLQDL 545
Query: 1293 RRE--GYELSVSRPRVIFK-TLNGE 1314
+ G L +S P V ++ T+ E
Sbjct: 546 EHDHAGVPLKISPPVVAYRETVESE 570
>SGD|S000002793 [details] [associations]
symbol:EFT2 "Elongation factor 2 (EF-2), also encoded by
EFT1" species:4932 "Saccharomyces cerevisiae" [GO:0006414
"translational elongation" evidence=IEA;IMP] [GO:0045901 "positive
regulation of translational elongation" evidence=IMP] [GO:0006412
"translation" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0003746 "translation elongation factor activity"
evidence=IEA;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0005840 "ribosome" evidence=TAS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
SGD:S000002793 SGD:S000005659 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:BK006948
GO:GO:0003924 GO:GO:0006184 EMBL:BK006938 GO:GO:0003746 EMBL:U28373
EMBL:X90518 EMBL:X94335 GO:GO:0019843 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U32274
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
GeneTree:ENSGT00620000088029 HOGENOM:HOG000231589 KO:K03234
OMA:NRHNRFY OrthoDB:EOG4PZNFQ EMBL:M59369 EMBL:M59370 EMBL:Z75041
EMBL:AY497635 PIR:A41778 RefSeq:NP_010673.1 RefSeq:NP_014776.1
PDB:1N0U PDB:1N0V PDB:1S1H PDB:1U2R PDB:1ZM2 PDB:1ZM3 PDB:1ZM4
PDB:1ZM9 PDB:2E1R PDB:2NPF PDB:2P8W PDB:2P8X PDB:2P8Y PDB:2P8Z
PDB:2ZIT PDB:3B78 PDB:3B82 PDB:3B8H PDB:3DNY PDBsum:1N0U
PDBsum:1N0V PDBsum:1S1H PDBsum:1U2R PDBsum:1ZM2 PDBsum:1ZM3
PDBsum:1ZM4 PDBsum:1ZM9 PDBsum:2E1R PDBsum:2NPF PDBsum:2P8W
PDBsum:2P8X PDBsum:2P8Y PDBsum:2P8Z PDBsum:2ZIT PDBsum:3B78
PDBsum:3B82 PDBsum:3B8H PDBsum:3DNY ProteinModelPortal:P32324
SMR:P32324 DIP:DIP-4911N IntAct:P32324 MINT:MINT-516631
STRING:P32324 SWISS-2DPAGE:P32324 PaxDb:P32324 PRIDE:P32324
EnsemblFungi:YDR385W EnsemblFungi:YOR133W GeneID:851993
GeneID:854301 KEGG:sce:YDR385W KEGG:sce:YOR133W CYGD:YDR385w
CYGD:YOR133w GeneTree:ENSGT00620000088065 ChEMBL:CHEMBL3376
EvolutionaryTrace:P32324 NextBio:970163 Genevestigator:P32324
GermOnline:YDR385W GermOnline:YOR133W Uniprot:P32324
Length = 842
Score = 249 (92.7 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 66/175 (37%), Positives = 95/175 (54%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSI----- 980
++IAHVDHGK+TL D L++++G + AR D+ + E+ERGITI S S+
Sbjct: 23 SVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMS 82
Query: 981 -----------EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFV 1029
+ N IN+ID+PGH DF EV L + D L+++D +EG QT V
Sbjct: 83 DEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETV 142
Query: 1030 TRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSA 1084
R+AL KP+VV+NK+DR A E V DL+ T E ++ ++ T A
Sbjct: 143 LRQALGERIKPVVVINKVDR--ALLELQVSKE-DLYQTFARTVESVNV-IVSTYA 193
Score = 109 (43.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ +VTD ++VV +GV QT + A + +V INK
Sbjct: 100 INLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIKPVVVINK 159
Query: 178 IDKLDINLDRIKQDL 192
+D+ + L K+DL
Sbjct: 160 VDRALLELQVSKEDL 174
Score = 97 (39.2 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 51/205 (24%), Positives = 97/205 (47%)
Query: 1122 LQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMNGPDDKPNKAK---INQI-RVFK 1176
L L + + +S G+ GR+ +G +KS Q V I GP+ P K I I RV
Sbjct: 378 LMLYVSKMVPTSDKGRFYAFGRVFAGTVKSGQKVRIQ-GPNYVPGKKDDLFIKAIQRVVL 436
Query: 1177 GLDRVL--VNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNID-EPTLTINFMVN 1232
+ R + +++ +G+I+ + GI++ + + T+ + + ++ P + + V
Sbjct: 437 MMGRFVEPIDDCPAGNIIGLVGIDQFLLKTGTLTTSETAHNMKVMKFSVSPVVQVAVEVK 496
Query: 1233 NSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENM 1292
N A K + +K RL K++ + ++ + I V+G GELHL I ++++
Sbjct: 497 N---ANDLPKLV--EGLK-RLS---KSDPCVLTYMSESGEHI--VAGTGELHLEICLQDL 545
Query: 1293 RRE--GYELSVSRPRVIFK-TLNGE 1314
+ G L +S P V ++ T+ E
Sbjct: 546 EHDHAGVPLKISPPVVAYRETVESE 570
>CGD|CAL0006276 [details] [associations]
symbol:orf19.4932 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032543 "mitochondrial
translation" evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345 CGD:CAL0006276
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
EMBL:AACQ01000010 EMBL:AACQ01000009 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
KO:K02355 TIGRFAMs:TIGR00484 HSSP:P13551 RefSeq:XP_722143.1
RefSeq:XP_722257.1 ProteinModelPortal:Q5AL45 STRING:Q5AL45
GeneID:3636106 GeneID:3636123 KEGG:cal:CaO19.12398
KEGG:cal:CaO19.4932 Uniprot:Q5AL45
Length = 761
Score = 210 (79.0 bits), Expect = 1.8e-21, Sum P(4) = 1.8e-21
Identities = 60/174 (34%), Positives = 87/174 (50%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKN--C 978
I AH+D GKTT + +L +G R ++ A+ MD ++E+E+GITI S C
Sbjct: 73 ISAHIDSGKTTFTERVLFYTGRIKAIHEVRGKDSVGAK-MDHMDLEREKGITIQSAATYC 131
Query: 979 SIEYNGT--RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKL 1036
S + + N+IDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 132 SWDKDDKSYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVAGVQSQTVTVDRQMRRY 191
Query: 1037 GFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYAN 1090
+ +NK+DR A P W A + KL + P+ L G N
Sbjct: 192 NVPRVTFINKMDRMGANP-W--RAIEQINAKLKIPAAAIQVPIGAEENLQGVVN 242
Score = 123 (48.4 bits), Expect = 3.5e-12, Sum P(4) = 3.5e-12
Identities = 42/137 (30%), Positives = 66/137 (48%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH FT R +V D VLVV A GV QT + VP + INK+D+
Sbjct: 145 IDTPGHIDFTIEVERALRVLDGAVLVVCAVAGVQSQTVTVDRQMRRYNVPRVTFINKMDR 204
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGV-GINKLLENISL-----QAEILE 234
+ N R + + ++ IP A+ + I A+ + G+ +++ ++L Q E +
Sbjct: 205 MGANPWRAIEQINAKLKIP----AAAIQVPIGAEENLQGVVNIIDRVALYNEGEQGETIR 260
Query: 235 LKAPVTTPAKGVIIESR 251
KA V K ++ E R
Sbjct: 261 -KAEVPEDLKELVEEKR 276
Score = 106 (42.4 bits), Expect = 1.8e-21, Sum P(4) = 1.8e-21
Identities = 50/201 (24%), Positives = 85/201 (42%)
Query: 1112 PVH-KDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKIN 1170
PVH +++ P LE Y G++ R+ G++K + + + K K K++
Sbjct: 364 PVHLTPSTSEPFVGLAFKLEEGPY-GQLTYIRVYQGKLK--KGAYMTHVKTGK--KVKVS 418
Query: 1171 QIRVFKGLDRVLVNEALSGDIVLITGIEEICI-GSTICDPSKPNGLPMLNIDEPTLTINF 1229
++ D V E +G+I GI+ C G T + M ++ P I+
Sbjct: 419 RLVRMHSNDMEDVAEVGAGEICATFGID--CASGDTFIGQGTQQQITMSSMFVPEAVISL 476
Query: 1230 MVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILI 1289
+ SP G F + NR K + RV + +SG GELHL I +
Sbjct: 477 SI--SPKTKDNGAF---SKAMNRFQ---KEDPTFRVHYDSESKETI-ISGMGELHLEIYV 527
Query: 1290 ENMRRE-GYELSVSRPRVIFK 1309
E ++RE G + +P+V ++
Sbjct: 528 ERIKREYGVDCVTGKPQVSYR 548
Score = 61 (26.5 bits), Expect = 1.8e-21, Sum P(4) = 1.8e-21
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 48 DPESFLLNEYNKNITAESL---VRAPIVTIMGHVDHGKTSLLDYI 89
D E +++E NK++ + L R + I H+D GKT+ + +
Sbjct: 44 DEEKVIIDEINKSLKPDDLQASTRLRNIGISAHIDSGKTTFTERV 88
Score = 61 (26.5 bits), Expect = 1.8e-21, Sum P(4) = 1.8e-21
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 1311 LNGE--LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
LN + + EP ++ V QG ++ +N GG + N +N + + +
Sbjct: 657 LNAQPVILEPIMSVEVTAPNEFQGSVVGLINKLGGMI-NDTVNGPDDFTVTAECSLNSMF 715
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAP 1393
GF T+G G S F +Y+P
Sbjct: 716 GFSTSLRASTQGKGEFSLEFLKYSP 740
Score = 40 (19.1 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 922 LIKSAIIAHVDHGKTTLIDHLLR 944
L K A + HV GK + L+R
Sbjct: 400 LKKGAYMTHVKTGKKVKVSRLVR 422
>UNIPROTKB|P60789 [details] [associations]
symbol:lepA "Elongation factor 4" species:243231 "Geobacter
sulfurreducens PCA" [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:NP_952319.1 ProteinModelPortal:P60789
SMR:P60789 GeneID:2685825 KEGG:gsu:GSU1266 PATRIC:22025303
BioCyc:GSUL243231:GH27-1219-MONOMER Uniprot:P60789
Length = 600
Score = 234 (87.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 54/137 (39%), Positives = 79/137 (57%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
+IIAH+DHGK+TL D LL +G + + + + +D ++E+ERGITI ++ + Y
Sbjct: 10 SIIAHIDHGKSTLADRLLEYTGALTERE-MQDQFLDKMDLERERGITIKAQTVRLTYRAD 68
Query: 983 --NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
N +N+IDTPGH DF EV R L+ + LL++DA +G QT A+ +
Sbjct: 69 DGNDYILNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAIDNNLEV 128
Query: 1041 IVVVNKIDRSNARPEWV 1057
V+NKID A PE V
Sbjct: 129 FPVLNKIDLPAAEPERV 145
Score = 156 (60.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 48/171 (28%), Positives = 83/171 (48%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH FT +R + +LVV A GV QT + A + + + +NK
Sbjct: 75 LNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAIDNNLEVFPVLNK 134
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID +R+K ++ E++I + A + SAK G+G ++LE I +I +
Sbjct: 135 IDLPAAEPERVKHEI--EEIIGLD---AHDAVMASAKEGIGTREILEEIV--KKIPPPEG 187
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD---IVVAGASYGRIR 285
P K ++ +S D+ +G + V + GT++ D +V G SY ++
Sbjct: 188 DPAAPLKALLFDSWYDQYQGVIILVRVIDGTVKKGDKIQLVSTGRSYEALK 238
Score = 106 (42.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 106/459 (23%), Positives = 191/459 (41%)
Query: 1093 SKARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ A++G + E I+K +P + + PL+ + Y Y G I + R++ G +K
Sbjct: 163 ASAKEGIGTREILEEIVKKIPPPEGDPAAPLKALLFDSWYDQYQGVIILVRVIDGTVKKG 222
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIEEIC---IGSTIC 1207
+ +++ + +A ++ VF + R V + +G++ LI GI+++ IG T+
Sbjct: 223 DKIQLVS--TGRSYEAL--KVGVFAPVMRE-VPQLAAGEVGFLIAGIKDVADAKIGDTVT 277
Query: 1208 DPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKF-ITTRQIKNRLDHEIKNNIGLRVT 1266
KP P+ E + MV + G + I T Q + D K +
Sbjct: 278 HALKPCVTPLGGFKE----VKPMVFS-------GLYPIDTAQYEQLRDALAKLKLNDSSF 326
Query: 1267 QNKHDDSI-----YEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKT--LNGELY-- 1316
+ + S+ + G LH+ I+ E + RE +L + P V++K + G++
Sbjct: 327 SFEPETSLALGFGFRCGFLGLLHMEIIQERLEREFNLDLITTAPTVVYKVHRIKGDVITI 386
Query: 1317 EPYENL--FVDIEEINQGIIMQKLN----YRGGDLKNIEINEKERVRLEYRIPSRGLIGF 1370
E L +I+ I + I+ ++ + GG L E + ++Y P+R +I +
Sbjct: 387 ESANQLPPLQEIDYIEEPFILASIHTPNEFVGGILSLCEEKRGVQREIKYLTPTRVMIIY 446
Query: 1371 Q---NEFITLTRGTGLISHVFEEYAPF-YNKSKYDLGKR-RNGVLISQYSGKAVAYSLWK 1425
+ NE + L L S + + YA Y Y R +LI+ G+AV
Sbjct: 447 ELPLNE-VVLDFYDRLKS-ITKGYASLDYEHLNYRRSDLVRMNILIN---GEAV------ 495
Query: 1426 LQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKI 1485
D L I+ + Y G RD LV+ +KE I + IQ K+
Sbjct: 496 --DALSLIIHRDKAYYRG-------RD---LVSKMKEL----IPRQMFEVVIQAAIGAKV 539
Query: 1486 TLEYAIEFINDDELVEITPKNI-RLRKRFLKENERKKKL 1523
++ + D L + +I R RK K+ E KK++
Sbjct: 540 IARETVKALRKDVLAKCYGGDITRKRKLLEKQKEGKKRM 578
>TIGR_CMR|GSU_1266 [details] [associations]
symbol:GSU_1266 "GTP-binding protein LepA" species:243231
"Geobacter sulfurreducens PCA" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:NP_952319.1 ProteinModelPortal:P60789
SMR:P60789 GeneID:2685825 KEGG:gsu:GSU1266 PATRIC:22025303
BioCyc:GSUL243231:GH27-1219-MONOMER Uniprot:P60789
Length = 600
Score = 234 (87.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 54/137 (39%), Positives = 79/137 (57%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
+IIAH+DHGK+TL D LL +G + + + + +D ++E+ERGITI ++ + Y
Sbjct: 10 SIIAHIDHGKSTLADRLLEYTGALTERE-MQDQFLDKMDLERERGITIKAQTVRLTYRAD 68
Query: 983 --NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
N +N+IDTPGH DF EV R L+ + LL++DA +G QT A+ +
Sbjct: 69 DGNDYILNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAIDNNLEV 128
Query: 1041 IVVVNKIDRSNARPEWV 1057
V+NKID A PE V
Sbjct: 129 FPVLNKIDLPAAEPERV 145
Score = 156 (60.0 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 48/171 (28%), Positives = 83/171 (48%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH FT +R + +LVV A GV QT + A + + + +NK
Sbjct: 75 LNLIDTPGHVDFTYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAIDNNLEVFPVLNK 134
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID +R+K ++ E++I + A + SAK G+G ++LE I +I +
Sbjct: 135 IDLPAAEPERVKHEI--EEIIGLD---AHDAVMASAKEGIGTREILEEIV--KKIPPPEG 187
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD---IVVAGASYGRIR 285
P K ++ +S D+ +G + V + GT++ D +V G SY ++
Sbjct: 188 DPAAPLKALLFDSWYDQYQGVIILVRVIDGTVKKGDKIQLVSTGRSYEALK 238
Score = 106 (42.4 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 106/459 (23%), Positives = 191/459 (41%)
Query: 1093 SKARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ A++G + E I+K +P + + PL+ + Y Y G I + R++ G +K
Sbjct: 163 ASAKEGIGTREILEEIVKKIPPPEGDPAAPLKALLFDSWYDQYQGVIILVRVIDGTVKKG 222
Query: 1152 QDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIEEIC---IGSTIC 1207
+ +++ + +A ++ VF + R V + +G++ LI GI+++ IG T+
Sbjct: 223 DKIQLVS--TGRSYEAL--KVGVFAPVMRE-VPQLAAGEVGFLIAGIKDVADAKIGDTVT 277
Query: 1208 DPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKF-ITTRQIKNRLDHEIKNNIGLRVT 1266
KP P+ E + MV + G + I T Q + D K +
Sbjct: 278 HALKPCVTPLGGFKE----VKPMVFS-------GLYPIDTAQYEQLRDALAKLKLNDSSF 326
Query: 1267 QNKHDDSI-----YEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKT--LNGELY-- 1316
+ + S+ + G LH+ I+ E + RE +L + P V++K + G++
Sbjct: 327 SFEPETSLALGFGFRCGFLGLLHMEIIQERLEREFNLDLITTAPTVVYKVHRIKGDVITI 386
Query: 1317 EPYENL--FVDIEEINQGIIMQKLN----YRGGDLKNIEINEKERVRLEYRIPSRGLIGF 1370
E L +I+ I + I+ ++ + GG L E + ++Y P+R +I +
Sbjct: 387 ESANQLPPLQEIDYIEEPFILASIHTPNEFVGGILSLCEEKRGVQREIKYLTPTRVMIIY 446
Query: 1371 Q---NEFITLTRGTGLISHVFEEYAPF-YNKSKYDLGKR-RNGVLISQYSGKAVAYSLWK 1425
+ NE + L L S + + YA Y Y R +LI+ G+AV
Sbjct: 447 ELPLNE-VVLDFYDRLKS-ITKGYASLDYEHLNYRRSDLVRMNILIN---GEAV------ 495
Query: 1426 LQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKI 1485
D L I+ + Y G RD LV+ +KE I + IQ K+
Sbjct: 496 --DALSLIIHRDKAYYRG-------RD---LVSKMKEL----IPRQMFEVVIQAAIGAKV 539
Query: 1486 TLEYAIEFINDDELVEITPKNI-RLRKRFLKENERKKKL 1523
++ + D L + +I R RK K+ E KK++
Sbjct: 540 IARETVKALRKDVLAKCYGGDITRKRKLLEKQKEGKKRM 578
>UNIPROTKB|Q16S14 [details] [associations]
symbol:AAEL010742 "Elongation factor G, mitochondrial"
species:7159 "Aedes aegypti" [GO:0003746 "translation elongation
factor activity" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0070125 "mitochondrial translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
UniPathway:UPA00345 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484
OMA:QEPGKGY EMBL:CH477689 RefSeq:XP_001661064.1 UniGene:Aae.11146
ProteinModelPortal:Q16S14 STRING:Q16S14
EnsemblMetazoa:AAEL010742-RA GeneID:5573819
KEGG:aag:AaeL_AAEL010742 VectorBase:AAEL010742 OrthoDB:EOG40CFXZ
PhylomeDB:Q16S14 GO:GO:0070125 Uniprot:Q16S14
Length = 748
Score = 235 (87.8 bits), Expect = 2.2e-21, Sum P(4) = 2.2e-21
Identities = 52/133 (39%), Positives = 76/133 (57%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G ++ + + MDS E+E++RGITI S
Sbjct: 47 ISAHIDSGKTTLTERILFYTGRIKQMHEVKGKDNVGATMDSMELERQRGITIQSAATYTM 106
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ +V G QT V R+ + +
Sbjct: 107 WKDHNINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLTVNRQMKRYNVPCL 166
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR+ A P
Sbjct: 167 AFINKLDRTGANP 179
Score = 124 (48.7 bits), Expect = 6.1e-10, Sum P(5) = 6.1e-10
Identities = 32/89 (35%), Positives = 44/89 (49%)
Query: 101 GIT-QHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTRE 159
GIT Q Y + +H +I +DTPGH FT R +V D +LV+ + GV QT
Sbjct: 95 GITIQSAATYTMWKDH-NINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQTLT 153
Query: 160 AIAHAKISGVPLIVAINKIDKLDINLDRI 188
K VP + INK+D+ N R+
Sbjct: 154 VNRQMKRYNVPCLAFINKLDRTGANPYRV 182
Score = 79 (32.9 bits), Expect = 2.2e-21, Sum P(4) = 2.2e-21
Identities = 37/133 (27%), Positives = 58/133 (43%)
Query: 1183 VNEALSGDIVLITGIEEICI-GST-ICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGRE 1240
VNE +GDI + G++ C G T + +P + + + +P +++ N+
Sbjct: 403 VNEVYAGDIFALFGVD--CASGDTFVTNPDLELSMESIFVPDPVVSMAIKPANNKDRDNF 460
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYE--VSGRGELHLTILIENMRREGYE 1298
K + R K + R +D I E VSG GELHL I + M RE Y
Sbjct: 461 SKAVA------RFT---KEDPTFRFA---YDTDIKETLVSGMGELHLEIYAQRMERE-YN 507
Query: 1299 LSV--SRPRVIFK 1309
V +P+V F+
Sbjct: 508 CPVILGKPKVAFR 520
Score = 78 (32.5 bits), Expect = 2.2e-21, Sum P(4) = 2.2e-21
Identities = 22/87 (25%), Positives = 41/87 (47%)
Query: 1307 IFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRG 1366
+F+ + ++ EP + V E QG ++ +LN R G + E +E + +P
Sbjct: 631 VFENGSWQILEPIMMVEVTAPEEFQGTVIGQLNKRHGIITGTEGSEGW-FTVYAEVPLND 689
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ E + T+G G S + Y+P
Sbjct: 690 MFGYAGELRSSTQGKGEFSMEYSRYSP 716
Score = 45 (20.9 bits), Expect = 6.1e-10, Sum P(5) = 6.1e-10
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 66 LVRAPIVTIMGHVDHGKTSLLDYI 89
L R + I H+D GKT+L + I
Sbjct: 39 LERIRNIGISAHIDSGKTTLTERI 62
Score = 43 (20.2 bits), Expect = 2.2e-21, Sum P(4) = 2.2e-21
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNN 1120
+T L G A +N K Q PL +A+L Y+P H N
Sbjct: 288 FTPVLVGTALKN-KGVQ----PLLDAVLNYLP-HPGEVEN 321
Score = 43 (20.2 bits), Expect = 6.1e-10, Sum P(5) = 6.1e-10
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 1029 VTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFD 1063
+ R ALK F P++V + +P ++DA +
Sbjct: 279 IRRSALKRTFTPVLVGTALKNKGVQP--LLDAVLN 311
>UNIPROTKB|Q5R9V1 [details] [associations]
symbol:GFM1 "Elongation factor G, mitochondrial"
species:9601 "Pongo abelii" [GO:0003746 "translation elongation
factor activity" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0070125 "mitochondrial translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
UniPathway:UPA00345 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484 GO:GO:0070125
CTD:85476 EMBL:CR859281 EMBL:CR860873 RefSeq:NP_001126761.1
UniGene:Pab.18620 ProteinModelPortal:Q5R9V1 PRIDE:Q5R9V1
GeneID:100173763 KEGG:pon:100173763 Uniprot:Q5R9V1
Length = 751
Score = 236 (88.1 bits), Expect = 3.6e-21, Sum P(4) = 3.6e-21
Identities = 53/133 (39%), Positives = 75/133 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G K + + +MDS E+E++RGITI S
Sbjct: 51 ISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTM 110
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ + +
Sbjct: 111 WKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFL 170
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR + P
Sbjct: 171 TFINKLDRMGSNP 183
Score = 125 (49.1 bits), Expect = 1.5e-09, Sum P(5) = 1.5e-09
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 99 GITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTV 158
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ N R Q + S+
Sbjct: 159 NRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSK 193
Score = 105 (42.0 bits), Expect = 3.6e-21, Sum P(4) = 3.6e-21
Identities = 55/198 (27%), Positives = 86/198 (43%)
Query: 1114 HKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIR 1173
++DNS+ P LE + G++ R G +K D + K ++ ++
Sbjct: 346 NRDNSH-PFVGLAFKLEVGRF-GQLTYVRSYQGELKK-GDTIYNTRTGKKVRLQRLARMH 402
Query: 1174 VFKGLDRVLVNEALSGDIVLITGIEEICI-GSTICDPSKPNGLPMLNIDEPTLTINFMVN 1232
D V +A +GDI + GI+ C G T D + +GL M +I P I+ +
Sbjct: 403 ADMMED---VEKAYAGDICALFGID--CASGDTFTDKAN-SGLSMESIHVPDPVISIAMK 456
Query: 1233 NSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENM 1292
S E KF R D K + T+NK ++I +SG GELHL I + +
Sbjct: 457 PSNKNDLE-KFSKGIGRFTREDPTFKVHFD---TENK--ETI--ISGMGELHLEIYAQRL 508
Query: 1293 RRE-GYELSVSRPRVIFK 1309
RE G +P+V F+
Sbjct: 509 EREYGCPCITGKPKVAFR 526
Score = 52 (23.4 bits), Expect = 3.6e-21, Sum P(4) = 3.6e-21
Identities = 15/72 (20%), Positives = 31/72 (43%)
Query: 1331 QGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEE 1390
QG ++ +N R G + + ++ L +P + G+ E + T G G + +
Sbjct: 661 QGQVIAGINRRHGVITGQD-GVEDYFTLYADVPLNDMFGYSTELRSCTEGKGEYTMEYGR 719
Query: 1391 YAPFYNKSKYDL 1402
Y P ++ D+
Sbjct: 720 YQPCLPSTQEDV 731
Score = 43 (20.2 bits), Expect = 1.5e-09, Sum P(5) = 1.5e-09
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 49 IGISAHIDSGKTTLTERV 66
Score = 40 (19.1 bits), Expect = 3.6e-21, Sum P(4) = 3.6e-21
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 1102 PLFEAILKYVP 1112
PL +A+L+Y+P
Sbjct: 308 PLLDAVLEYLP 318
Score = 40 (19.1 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1151 LQDVVIMNGPDDKPNKAKI 1169
+Q+ I+N DD K KI
Sbjct: 323 VQNYAILNKEDDSKEKTKI 341
Score = 37 (18.1 bits), Expect = 2.8e-09, Sum P(5) = 2.8e-09
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 1029 VTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFD 1063
+ R LK F P+ + + + +P ++DA +
Sbjct: 283 IRRATLKRSFTPVFLGSALKNKGVQP--LLDAVLE 315
>TAIR|locus:2030116 [details] [associations]
symbol:AT1G76810 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GO:GO:0005886 GO:GO:0003924 GO:GO:0006184 GO:GO:0003743
InterPro:IPR009000 SUPFAM:SSF50447 Gene3D:3.40.50.10050
InterPro:IPR015760 InterPro:IPR023115 PANTHER:PTHR23115:SF41
Pfam:PF11987 SUPFAM:SSF52156 KO:K03243 IPI:IPI00523691
RefSeq:NP_177807.3 UniGene:At.34607 UniGene:At.69067
ProteinModelPortal:F4I420 SMR:F4I420 PRIDE:F4I420
EnsemblPlants:AT1G76810.1 GeneID:844015 KEGG:ath:AT1G76810
OMA:RTHGKAE Uniprot:F4I420
Length = 1294
Score = 253 (94.1 bits), Expect = 4.0e-21, Sum P(3) = 4.0e-21
Identities = 62/140 (44%), Positives = 83/140 (59%)
Query: 58 NKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA-YNVVTNHG 116
+++I E +R+PI IMGHVD GKT LLD IR TNV EAGGITQ IGA Y N
Sbjct: 694 SESIEGEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIR 753
Query: 117 SIT---------------FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAI 161
T +DTPGHE+FT +R+RG+ + D+ +LVV G+ PQT E++
Sbjct: 754 ERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIMHGLEPQTIESL 813
Query: 162 AHAKISGVPLIVAINKIDKL 181
++ IVA+NK+D+L
Sbjct: 814 NLLRMRNTEFIVALNKVDRL 833
Score = 108 (43.1 bits), Expect = 4.0e-21, Sum P(3) = 4.0e-21
Identities = 77/357 (21%), Positives = 146/357 (40%)
Query: 200 EEYGGASPFISISAKTGVGI-NKLLENISLQAEILELKAPVTTPAKGVIIESRLDKGKGP 258
++ G + SA +G G+ + LL + + + K + ++E ++ +G G
Sbjct: 884 KDMGDTFSIVPTSAISGEGVPDLLLWLVQWAQKTMVEKLTYVDEVQCTVLEVKVIEGHGT 943
Query: 259 VATVLIQSGTLRCSD-IVVAGAS---YGRIRSMLNENG-KNILEAGPSIPV-EIQGLTKV 312
V++ +G L D IVV G IR++L + K + G + EI+ +
Sbjct: 944 TIDVVLVNGELHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGTYLHYKEIKAAQGI 1003
Query: 313 PFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQK-LHKTENMFNDINKEKVKNLLIII 371
+ + L E L G D++ K+ + E++ + I+K + +
Sbjct: 1004 KITAQGL-----EHAIAGTALHVVGPDDDIEAIKESAMEDMESVLSRIDKSGEG---VYV 1055
Query: 372 KTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLA---IASK---AIIIGFN 425
+ GS E L E LK+ + VKI V +G +++ D+ A + K A I+ F+
Sbjct: 1056 QASTLGSLEALLEYLKSPA---VKIPVSGIGIGPVHKKDVMKAGVMLERKKEYATILAFD 1112
Query: 426 VRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENL--LGLAEIRQVI- 482
V+ R+LA K+ I N+ +KKE+ + Q++
Sbjct: 1113 VKVTTEARELADEMGVKIFCADIIYHLFDLFKAYIENIKEEKKKESADEAVFPCVLQILP 1172
Query: 483 --LVNKVSKIA-GCYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAG 536
+ NK I G ++EG+++ + I + + I G + S++ V K G
Sbjct: 1173 NCVFNKKDPIVLGVDVIEGILKIGTPICV-PGREFIDIGRIASIENNHKPVDYAKKG 1228
Score = 41 (19.5 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 951 KNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVD 1010
K + + EI+ +GI I ++ GT ++++ P D E + ++
Sbjct: 983 KELRVKGTYLHYKEIKAAQGIKITAQGLEHAIAGTALHVVG-PDD-DIEAIKESAMEDME 1040
Query: 1011 NVLLLID 1017
+VL ID
Sbjct: 1041 SVLSRID 1047
Score = 37 (18.1 bits), Expect = 4.0e-21, Sum P(3) = 4.0e-21
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1442 EGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDE 1475
E + G H D LV+ I + + ++S+ DE
Sbjct: 1242 EQKMFGRHFDMEDELVSHISRRSIDILKSNYRDE 1275
>UNIPROTKB|F1PQD0 [details] [associations]
symbol:GFM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0003746 "translation elongation factor
activity" evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HAMAP:MF_00054_B TIGRFAMs:TIGR00484 OMA:QEPGKGY
GeneTree:ENSGT00550000074911 EMBL:AAEX03013724 EMBL:AAEX03013723
Ensembl:ENSCAFT00000014349 Uniprot:F1PQD0
Length = 751
Score = 236 (88.1 bits), Expect = 4.5e-21, Sum P(3) = 4.5e-21
Identities = 53/133 (39%), Positives = 75/133 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G K + + +MDS E+E++RGITI S
Sbjct: 51 ISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTM 110
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ + +
Sbjct: 111 WKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFL 170
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR + P
Sbjct: 171 TFINKLDRMGSNP 183
Score = 125 (49.1 bits), Expect = 3.7e-09, Sum P(4) = 3.7e-09
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 99 GITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTV 158
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ N R Q + S+
Sbjct: 159 NRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSK 193
Score = 100 (40.3 bits), Expect = 4.5e-21, Sum P(3) = 4.5e-21
Identities = 60/208 (28%), Positives = 91/208 (43%)
Query: 1117 NSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFK 1176
NS++P LE + G++ R G +K D I N K K ++ ++ V
Sbjct: 348 NSSHPFVGLAFKLEAGRF-GQLTYVRNYQGELKK-GDT-IYNTRTGK--KVRVQRL-VRM 401
Query: 1177 GLDRVL-VNEALSGDIVLITGIEEICI-GSTICDPSKPNGLPMLNIDEPTLTINFMVNNS 1234
D + V E +GDI + GI+ C G T + + +GL M +I P I+ + S
Sbjct: 402 HADMMEDVEEVYAGDICALFGID--CASGDTFTNRNN-SGLSMESIHVPDPVISIAMKPS 458
Query: 1235 PLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRR 1294
E KF R D K + N+ ++I VSG GELHL I + M R
Sbjct: 459 NKNDLE-KFSKGIGRFTREDPTFKVHF-----DNESKETI--VSGMGELHLEIYAQRMER 510
Query: 1295 E-GYELSVSRPRVIFK-TLNGELYEPYE 1320
E G +P+V F+ T+ + P+E
Sbjct: 511 EYGCPCVTGKPKVAFRETITAPV--PFE 536
Score = 52 (23.4 bits), Expect = 4.5e-21, Sum P(3) = 4.5e-21
Identities = 20/88 (22%), Positives = 37/88 (42%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
+ EP ++ V QG ++ +N R G + + E + L +P + G+ E
Sbjct: 645 ILEPIMSVEVIAPNEFQGQVIAGINRRHGVITGQDGIE-DYFTLYADVPLNEMFGYSTEL 703
Query: 1375 ITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
+ T G G + + Y P ++ DL
Sbjct: 704 RSCTEGKGEYTMEYCRYQPCSPSTQEDL 731
Score = 43 (20.2 bits), Expect = 3.7e-09, Sum P(4) = 3.7e-09
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 49 IGISAHIDSGKTTLTERV 66
>UNIPROTKB|A5PKR8 [details] [associations]
symbol:gfm1 "Elongation factor G, mitochondrial"
species:8355 "Xenopus laevis" [GO:0003746 "translation elongation
factor activity" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0070125 "mitochondrial translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
UniPathway:UPA00345 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
KO:K02355 TIGRFAMs:TIGR00484 GO:GO:0070125 CTD:85476 EMBL:BC142588
RefSeq:NP_001093367.1 UniGene:Xl.33960 ProteinModelPortal:A5PKR8
PRIDE:A5PKR8 GeneID:100101315 KEGG:xla:100101315
Xenbase:XB-GENE-983075 Uniprot:A5PKR8
Length = 748
Score = 238 (88.8 bits), Expect = 5.4e-21, Sum P(4) = 5.4e-21
Identities = 60/166 (36%), Positives = 84/166 (50%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G + + +MDS E+E++RGITI S
Sbjct: 49 ISAHIDSGKTTLTERVLYYTGRIAHMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTM 108
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ + +
Sbjct: 109 WKDTNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFL 168
Query: 1042 VVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
+NK+DR + P A L KL + P+ S G
Sbjct: 169 TFINKLDRMGSNPS---RAVLQLRSKLNHNAAFIQIPIGVESKFKG 211
Score = 123 (48.4 bits), Expect = 1.6e-08, Sum P(5) = 1.6e-08
Identities = 34/95 (35%), Positives = 44/95 (46%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 97 GITIQSAATYTMWKDTNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTV 156
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ N R L S+
Sbjct: 157 NRQMKRYNVPFLTFINKLDRMGSNPSRAVLQLRSK 191
Score = 102 (41.0 bits), Expect = 5.4e-21, Sum P(4) = 5.4e-21
Identities = 63/255 (24%), Positives = 111/255 (43%)
Query: 1080 IYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGK-- 1137
++T L G A +N K Q PL +A+L+Y+P + N + S E S L K
Sbjct: 289 LFTPVLVGSALKN-KGVQ----PLLDAVLEYLPNPSEVQNFAILNHENSEETSRILMKSD 343
Query: 1138 -------IGIG-RILSGRIKSLQDVVIMNGPDDKPN---------KAKINQIRVFKGLDR 1180
+G+ ++ +GR L V + G K + K ++ ++
Sbjct: 344 RDSSQPFVGLAFKLEAGRFGQLTYVRVYQGMLRKSDYIYNTRTGKKVRVQRLVCLHADIM 403
Query: 1181 VLVNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAG 1238
+ EA +GDI + GI+ C G T S N + +++ +P ++++ N
Sbjct: 404 EDIEEAYAGDICALFGID--CASGDTFTSKSNDNLSMESIHVPDPVISVSMKPTNKNDLD 461
Query: 1239 REGKFIT--TRQIKN-RLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE 1295
+ K I+ TR+ R+ +E+++ ++I VSG GELHL I + M RE
Sbjct: 462 KFSKGISRFTREDPTFRVHYEVESK-----------ETI--VSGMGELHLEIYAQRMERE 508
Query: 1296 -GYELSVSRPRVIFK 1309
+ +P+V F+
Sbjct: 509 YACPCVMGKPKVAFR 523
Score = 48 (22.0 bits), Expect = 5.4e-21, Sum P(4) = 5.4e-21
Identities = 17/88 (19%), Positives = 38/88 (43%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
+ EP ++ + QG ++ +N R G + + ++ L +P + G+ +E
Sbjct: 642 ILEPIMSVEIVAPSEFQGPVIAGINRRHGVIVGQDGSDGY-FTLYADVPLNDMFGYASEL 700
Query: 1375 ITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
+ T G G + + Y P ++ +L
Sbjct: 701 RSCTEGKGEYTMDYSRYQPCLPSTQEEL 728
Score = 43 (20.2 bits), Expect = 5.4e-21, Sum P(4) = 5.4e-21
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 47 IGISAHIDSGKTTLTERV 64
Score = 38 (18.4 bits), Expect = 1.6e-08, Sum P(5) = 1.6e-08
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 1029 VTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFD 1063
+ R LK F P++V + + +P ++DA +
Sbjct: 281 IRRATLKRLFTPVLVGSALKNKGVQP--LLDAVLE 313
>TAIR|locus:2030126 [details] [associations]
symbol:AT1G76820 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GO:GO:0003924 GO:GO:0006184
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156 KO:K03243
IPI:IPI00521768 RefSeq:NP_565140.4 UniGene:At.19105
ProteinModelPortal:F4I421 SMR:F4I421 PRIDE:F4I421
EnsemblPlants:AT1G76820.1 GeneID:844016 KEGG:ath:AT1G76820
OMA:DDEYSIC Uniprot:F4I421
Length = 1166
Score = 242 (90.2 bits), Expect = 6.7e-21, Sum P(2) = 6.7e-21
Identities = 69/172 (40%), Positives = 93/172 (54%)
Query: 28 ETAMI-LVEEMGHVAHASKLNDPESFLL-NEYNKNITAESLVRAPIVTIMGHVDHGKTSL 85
ETA + + E+ A +K L NE+ + E L R+ I IMGHVD GKT L
Sbjct: 536 ETAAVKAISEVEDAATQTKRAKKGKCLAPNEFIEE-GGEKL-RSIICCIMGHVDSGKTKL 593
Query: 86 LDYIRKTNVVFSEAGGITQHIGA-YNVVTNHGSIT---------------FLDTPGHEAF 129
LD IR TNV EAGGITQ IGA Y N T +DTPGHE+F
Sbjct: 594 LDCIRGTNVQEGEAGGITQQIGATYFPAKNIRERTRELKADAKLKVPGLLVIDTPGHESF 653
Query: 130 TAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKL 181
T +R+RG+ + D+ +LVV G+ PQT E++ ++ I+A+NK+D+L
Sbjct: 654 TNLRSRGSSLCDLAILVVDITHGLQPQTIESLNLLRMRNTEFIIALNKVDRL 705
Score = 102 (41.0 bits), Expect = 6.7e-21, Sum P(2) = 6.7e-21
Identities = 73/327 (22%), Positives = 134/327 (40%)
Query: 170 PLIVAI---NK--IDKLDINLDRIKQDLISEQVIPEEY------GGASPFISISAKTGVG 218
P++ A+ NK I++ ++ L +I + + + E Y G + SA +G G
Sbjct: 715 PIVKAMKQQNKDVINEFNLRLKKIINEFQEQGLNTELYYKNKDMGETFSIVPTSAISGEG 774
Query: 219 I-NKLLENISLQAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD-IVV 276
+ + LL + + + K + ++E ++ +G G V++ +G L D IVV
Sbjct: 775 VPDLLLWLVQWAQKTMVEKLTYVDEVQCTVLEVKVIEGHGTTIDVVLVNGELHEGDQIVV 834
Query: 277 AGAS---YGRIRSMLNENG-KNILEAGPSIP-VEIQGLTKVPFSGEELFVILNEKKAREI 331
G IR++L + K + G + EI+ + + + L E
Sbjct: 835 CGLQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITAQGL-----EHAIAGT 889
Query: 332 GLFRQGKFRDVKLSKQK-LHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLS 390
L G D++ K+ + E++ + I+K + ++T GS E L E LK
Sbjct: 890 SLHVVGPDDDIEAMKESAMEDMESVLSRIDKSGEG---VYVQTSTLGSLEALLEFLK--- 943
Query: 391 TDKVKIQVIHNAVGNINESDINLA---IASK---AIIIGFNVRADASTRKLAQXXXXXXX 444
T V I V +G +++ DI A + K A I+ F+V+ R+LA
Sbjct: 944 TPAVNIPVSGIGIGPVHKKDIMKAGVMLEKKKEYATILAFDVKVTTEARELADEMGVKIF 1003
Query: 445 XXXXXXXXXKEIKSEITNLIPLEKKEN 471
+ + I N+ +KKE+
Sbjct: 1004 CADIIYQLFNQFQVYIENIKEEKKKES 1030
Score = 49 (22.3 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 23/96 (23%), Positives = 39/96 (40%)
Query: 951 KNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVD 1010
K + + EI+ +GI I ++ GT ++++ P D E + ++
Sbjct: 855 KELRVKGTYLHHKEIKAAQGIKITAQGLEHAIAGTSLHVVG-PDD-DIEAMKESAMEDME 912
Query: 1011 NVLLLID-AVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+VL ID + EG QT + L F VN
Sbjct: 913 SVLSRIDKSGEGVYVQTSTLGSLEALLEFLKTPAVN 948
>UNIPROTKB|F1S2J6 [details] [associations]
symbol:GFM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032790 "ribosome disassembly" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0003924 GO:GO:0032543 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0032790 InterPro:IPR009022
SMART:SM00838 SUPFAM:SSF54980 OMA:EEYTGGI
GeneTree:ENSGT00550000074890 EMBL:CU928749 EMBL:CU657963
Ensembl:ENSSSCT00000015375 Uniprot:F1S2J6
Length = 777
Score = 233 (87.1 bits), Expect = 7.5e-21, Sum P(4) = 7.5e-21
Identities = 61/172 (35%), Positives = 92/172 (53%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L SG R +++ + D E+ERGITI S + ++ G
Sbjct: 75 IMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDWKG 134
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RIN+IDTPGH DF EVER L ++D + + DA G QT V R+A K I +
Sbjct: 135 YRINLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKIPRICFL 194
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKAR 1096
NK+D++ A + V++ + +KL A L P+ G + +K +
Sbjct: 195 NKMDKTGASFNYAVES---IREKLKAKPLLLQLPIGEAKTFKGVVDVVNKEK 243
Score = 106 (42.4 bits), Expect = 3.6e-07, Sum P(5) = 3.6e-07
Identities = 54/195 (27%), Positives = 82/195 (42%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G VD G T + D++ + GIT A I +DTPGH FT
Sbjct: 100 LGDVDDGDT-VTDFMAQ-----ERERGITIQSAAVTFDWKGYRINLIDTPGHVDFTLEVE 153
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDIN----LDRIKQ 190
R +V D V V A GV QT A +P I +NK+DK + ++ I++
Sbjct: 154 RCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKIPRICFLNKMDKTGASFNYAVESIRE 213
Query: 191 DLISEQVIPE-EYGGASPFISISAKTGVGINKLLENISL-------QAEILELKAPV--- 239
L ++ ++ + G A F + V KLL N++ + +LE+ P
Sbjct: 214 KLKAKPLLLQLPIGEAKTFKGVVDV--VNKEKLLWNLNSDDGKNFERKPLLEVSDPQLLK 271
Query: 240 -TTPAKGVIIESRLD 253
TT A+ +IE D
Sbjct: 272 ETTEARNALIEQVAD 286
Score = 81 (33.6 bits), Expect = 7.5e-21, Sum P(4) = 7.5e-21
Identities = 22/101 (21%), Positives = 46/101 (45%)
Query: 1309 KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
K + ++ EP NL V + ++ L R G+++ I+ + +V + + +P ++
Sbjct: 677 KKADKQILEPLMNLEVTVPRDYLSPVLADLAQRRGNIQEIQTRQDNKVVIGF-VPLAEIM 735
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
G+ TLT G+ + Y + + L RR+G+
Sbjct: 736 GYSTVLRTLTSGSATFALELSNYQAMNPQDQSTLLSRRSGL 776
Score = 67 (28.6 bits), Expect = 7.5e-21, Sum P(4) = 7.5e-21
Identities = 48/191 (25%), Positives = 80/191 (41%)
Query: 1136 GKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLIT 1195
G + RI SG IK + +NG + +I+++ + V + +G+I L
Sbjct: 381 GPLVFMRIYSGMIKPQLAIHNINGNCTE----RISRLLLPFADQHVEIPSLTAGNIALTV 436
Query: 1196 GIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSP----LAG---REGKFITTRQ 1248
G++ G TI SK + L E NN LAG E F T +
Sbjct: 437 GLKHTATGDTIVS-SKSSALAAARRAERKGEKKHRENNEAERLLLAGVEIPEPVFFCTIE 495
Query: 1249 ---IKNR--LDHEIK----NNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYE 1298
+ + LDH +K + L+V + D + G GELH+ I+ + ++RE G E
Sbjct: 496 PPSVAKQPDLDHALKCLQREDPSLKVKLDP-DSGQTILCGMGELHIEIIHDRIKREYGLE 554
Query: 1299 LSVSRPRVIFK 1309
+ +V ++
Sbjct: 555 TYLGPLQVAYR 565
Score = 60 (26.2 bits), Expect = 3.9e-20, Sum P(4) = 3.9e-20
Identities = 30/121 (24%), Positives = 53/121 (43%)
Query: 1102 PLFEAILKYVPVHKDNSNNPLQL---QIISLEYS----SYLGKIGIGRILSGRIKSLQDV 1154
PL +AI Y+P ++ + LQ + +L + G + RI SG IK +
Sbjct: 340 PLLDAITMYLPSPEERNYEFLQWYKGDLCALAFKVLHDKQRGPLVFMRIYSGMIKPQLAI 399
Query: 1155 VIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNG 1214
+NG + +I+++ + V + +G+I L G++ G TI SK +
Sbjct: 400 HNINGNCTE----RISRLLLPFADQHVEIPSLTAGNIALTVGLKHTATGDTIVS-SKSSA 454
Query: 1215 L 1215
L
Sbjct: 455 L 455
Score = 50 (22.7 bits), Expect = 7.5e-21, Sum P(4) = 7.5e-21
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 39 HVAHASKLNDPESFLLNEYNK--NITAESLVRAPIVTIMGHVDHGKTSLLDYI 89
H+ H + + N+ +I + + + + IM H+D GKT+ + I
Sbjct: 38 HLPHGRNYSSLPGIIGNDVKSLHSIISPPITKIRNIGIMAHIDAGKTTTTERI 90
Score = 38 (18.4 bits), Expect = 3.6e-07, Sum P(5) = 3.6e-07
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 253 DKGKGPVATVLIQSGTLR 270
DK +GP+ + I SG ++
Sbjct: 377 DKQRGPLVFMRIYSGMIK 394
Score = 37 (18.1 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 1341 RGGDLKNIEINEKERVRL 1358
R G+ K+ E NE ER+ L
Sbjct: 463 RKGEKKHRENNEAERLLL 480
>UNIPROTKB|F1P0J0 [details] [associations]
symbol:GFM1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0070125 "mitochondrial translational elongation"
evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HAMAP:MF_00054_B TIGRFAMs:TIGR00484 OMA:QEPGKGY
GO:GO:0070125 GeneTree:ENSGT00550000074911 EMBL:AADN02021077
IPI:IPI00684447 Ensembl:ENSGALT00000015688 ArrayExpress:F1P0J0
Uniprot:F1P0J0
Length = 722
Score = 234 (87.4 bits), Expect = 7.7e-21, Sum P(3) = 7.7e-21
Identities = 54/137 (39%), Positives = 77/137 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G + + + +MDS E+E++RGITI S
Sbjct: 23 ISAHIDSGKTTLTERVLFYTGRIAQMHEVRGKDGVGAVMDSMELERQRGITIQSAATYTM 82
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ + +
Sbjct: 83 WKDTNINIIDTPGHVDFTIEVERSLRVLDGAILVLCAVGGVQCQTITVNRQMKRYNVPFL 142
Query: 1042 VVVNKIDRSNARPEWVV 1058
+NK+DR + P V
Sbjct: 143 TFINKLDRMGSSPSRAV 159
Score = 120 (47.3 bits), Expect = 8.7e-09, Sum P(5) = 8.7e-09
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D +LV+ A GV QT
Sbjct: 71 GITIQSAATYTMWKDTNINIIDTPGHVDFTIEVERSLRVLDGAILVLCAVGGVQCQTITV 130
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ + R Q + S+
Sbjct: 131 NRQMKRYNVPFLTFINKLDRMGSSPSRAVQQMRSK 165
Score = 97 (39.2 bits), Expect = 7.7e-21, Sum P(3) = 7.7e-21
Identities = 64/253 (25%), Positives = 109/253 (43%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGK--- 1137
+T L G A +N K Q PL +A+L+Y+P + N + Q S + + +L
Sbjct: 264 FTPVLVGSALKN-KGVQ----PLLDAVLEYLPNPSEVENYAILNQGDSEDKAKFLLNSAR 318
Query: 1138 ------IGIG-RILSGRIKSLQDVVIMNGPDDKP----NKAKINQIRVFKGL----DRVL 1182
+G+ ++ +GR L + + G K N ++RV + + D +
Sbjct: 319 DNSQPFVGLAFKLEAGRFGQLTYIRVYQGMLKKSDYIYNTRTGKRVRVQRLVRMHSDNME 378
Query: 1183 -VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGR 1239
VNE +GDI + GI+ C G T D + + + +++ +P +++ +N
Sbjct: 379 DVNEVYAGDICALFGID--CASGDTFTDKTSTDISMESIHVPDPVISVAMKPSNK---ND 433
Query: 1240 EGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYE--VSGRGELHLTILIENMRRE-G 1296
KF L + + RV DD E VSG GELHL I + M RE
Sbjct: 434 FDKF------SKGLSRFTREDPTFRV---HFDDESKETIVSGMGELHLEIYSQRMEREYS 484
Query: 1297 YELSVSRPRVIFK 1309
++ +P+V F+
Sbjct: 485 CPCTMGKPKVAFR 497
Score = 54 (24.1 bits), Expect = 7.7e-21, Sum P(3) = 7.7e-21
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 1331 QGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEE 1390
QG ++ +N R G + + E L +P + G+ +E + T G G + + +
Sbjct: 632 QGAVIAGINRRHGVITGQDGTEGY-FTLYAEVPLNDMFGYASELRSCTEGKGEYTMEYSK 690
Query: 1391 YAP 1393
Y P
Sbjct: 691 YHP 693
Score = 43 (20.2 bits), Expect = 8.7e-09, Sum P(5) = 8.7e-09
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 21 IGISAHIDSGKTTLTERV 38
Score = 42 (19.8 bits), Expect = 8.7e-09, Sum P(5) = 8.7e-09
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 1029 VTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFD 1063
+ R LK F P++V + + +P ++DA +
Sbjct: 255 IRRATLKKSFTPVLVGSALKNKGVQP--LLDAVLE 287
>UNIPROTKB|Q96RP9 [details] [associations]
symbol:GFM1 "Elongation factor G, mitochondrial"
species:9606 "Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0070125 "mitochondrial translational
elongation" evidence=IDA] [GO:0003746 "translation elongation
factor activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 EMBL:CH471052 GO:GO:0003924 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484
GO:GO:0070125 OMA:FMGSAYK CTD:85476 OrthoDB:EOG4D52X3 EMBL:AF309777
EMBL:AF367998 EMBL:AK092293 EMBL:AK315031 EMBL:AC080013
EMBL:BC049210 IPI:IPI00154473 IPI:IPI00945964 RefSeq:NP_079272.4
UniGene:Hs.518355 ProteinModelPortal:Q96RP9 SMR:Q96RP9
IntAct:Q96RP9 STRING:Q96RP9 PhosphoSite:Q96RP9 DMDM:116241346
PaxDb:Q96RP9 PRIDE:Q96RP9 Ensembl:ENST00000264263
Ensembl:ENST00000486715 GeneID:85476 KEGG:hsa:85476 UCSC:uc003fce.3
UCSC:uc003fcg.3 GeneCards:GC03P158362 HGNC:HGNC:13780 HPA:HPA034765
MIM:606639 MIM:609060 neXtProt:NX_Q96RP9 Orphanet:137681
PharmGKB:PA134971637 InParanoid:Q96RP9 ChiTaRS:GFM1
GenomeRNAi:85476 NextBio:76132 ArrayExpress:Q96RP9 Bgee:Q96RP9
CleanEx:HS_GFM1 Genevestigator:Q96RP9 GermOnline:ENSG00000168827
Uniprot:Q96RP9
Length = 751
Score = 236 (88.1 bits), Expect = 9.2e-21, Sum P(4) = 9.2e-21
Identities = 53/133 (39%), Positives = 75/133 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G K + + +MDS E+E++RGITI S
Sbjct: 51 ISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTM 110
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ + +
Sbjct: 111 WKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFL 170
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR + P
Sbjct: 171 TFINKLDRMGSNP 183
Score = 125 (49.1 bits), Expect = 4.9e-09, Sum P(6) = 4.9e-09
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 99 GITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTV 158
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ N R Q + S+
Sbjct: 159 NRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSK 193
Score = 99 (39.9 bits), Expect = 9.2e-21, Sum P(4) = 9.2e-21
Identities = 54/197 (27%), Positives = 83/197 (42%)
Query: 1115 KDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRV 1174
+DNS+ P LE + G++ R G +K D + K ++ ++
Sbjct: 347 RDNSH-PFVGLAFKLEVGRF-GQLTYVRSYQGELKK-GDTIYNTRTRKKVRLQRLARMHA 403
Query: 1175 FKGLDRVLVNEALSGDIVLITGIEEICI-GSTICDPSKPNGLPMLNIDEPTLTINFMVNN 1233
D V E +GDI + GI+ C G T D + +GL M +I P I+ +
Sbjct: 404 DMMED---VEEVYAGDICALFGID--CASGDTFTDKAN-SGLSMESIHVPDPVISIAMKP 457
Query: 1234 SPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMR 1293
S E KF R D K T+NK +++ +SG GELHL I + +
Sbjct: 458 SNKNDLE-KFSKGIGRFTREDPTFKVYFD---TENK--ETV--ISGMGELHLEIYAQRLE 509
Query: 1294 RE-GYELSVSRPRVIFK 1309
RE G +P+V F+
Sbjct: 510 REYGCPCITGKPKVAFR 526
Score = 54 (24.1 bits), Expect = 9.2e-21, Sum P(4) = 9.2e-21
Identities = 15/72 (20%), Positives = 31/72 (43%)
Query: 1331 QGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEE 1390
QG ++ +N R G + + ++ L +P + G+ E + T G G + +
Sbjct: 661 QGQVIAGINRRHGVITGQD-GVEDYFTLYADVPLNDMFGYSTELRSCTEGKGEYTMEYSR 719
Query: 1391 YAPFYNKSKYDL 1402
Y P ++ D+
Sbjct: 720 YQPCLPSTQEDV 731
Score = 45 (20.9 bits), Expect = 0.00035, Sum P(5) = 0.00035
Identities = 22/83 (26%), Positives = 42/83 (50%)
Query: 295 ILEAGPSIPVEIQG---LTKVPFSGEELFVILNEKKARE---IGL-FRQ--GKFRD---V 342
+LE P+ P E+Q L K S E+ +++N + +GL F+ G+F V
Sbjct: 313 VLEYLPN-PSEVQNYAILNKEDDSKEKTKILMNSSRDNSHPFVGLAFKLEVGRFGQLTYV 371
Query: 343 KLSKQKLHKTENMFNDINKEKVK 365
+ + +L K + ++N ++KV+
Sbjct: 372 RSYQGELKKGDTIYNTRTRKKVR 394
Score = 43 (20.2 bits), Expect = 4.9e-09, Sum P(6) = 4.9e-09
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 49 IGISAHIDSGKTTLTERV 66
Score = 41 (19.5 bits), Expect = 0.00035, Sum P(5) = 0.00035
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 467 EKKENLL-GLAEIRQVILVNKVSKIAGCYILEG 498
E KE ++ G+ E+ I ++ + GC + G
Sbjct: 487 ENKETVISGMGELHLEIYAQRLEREYGCPCITG 519
Score = 40 (19.1 bits), Expect = 9.2e-21, Sum P(4) = 9.2e-21
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 1102 PLFEAILKYVP 1112
PL +A+L+Y+P
Sbjct: 308 PLLDAVLEYLP 318
Score = 40 (19.1 bits), Expect = 8.2e-15, Sum P(4) = 8.2e-15
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1151 LQDVVIMNGPDDKPNKAKI 1169
+Q+ I+N DD K KI
Sbjct: 323 VQNYAILNKEDDSKEKTKI 341
Score = 37 (18.1 bits), Expect = 4.9e-09, Sum P(6) = 4.9e-09
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 752 NIPNSIEIIEKILINFHGKISQI 774
N +++IE+ I F G QI
Sbjct: 210 NFKGIVDLIEERAIYFDGDFGQI 232
Score = 37 (18.1 bits), Expect = 9.3e-09, Sum P(6) = 9.3e-09
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 1029 VTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFD 1063
+ R LK F P+ + + + +P ++DA +
Sbjct: 283 IRRATLKRSFTPVFLGSALKNKGVQP--LLDAVLE 315
>WB|WBGene00021857 [details] [associations]
symbol:iffb-1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003924 GO:GO:0006184
GO:GO:0000003 GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156 KO:K03243
GeneTree:ENSGT00690000102102 EMBL:FO081808 EMBL:DQ867020
RefSeq:NP_497536.2 UniGene:Cel.9695 ProteinModelPortal:G5EGT7
SMR:G5EGT7 EnsemblMetazoa:Y54F10BM.2 GeneID:175353
KEGG:cel:CELE_Y54F10BM.2 CTD:175353 WormBase:Y54F10BM.2 OMA:ESELEDW
NextBio:887780 Uniprot:G5EGT7
Length = 1074
Score = 145 (56.1 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNV 111
N + ++L R+P++ ++GHVD GKT +LD IR+TNV EAGGITQ IGA V
Sbjct: 476 NRSTDNL-RSPVICVLGHVDTGKTKMLDTIRRTNVQQGEAGGITQQIGATEV 526
Score = 139 (54.0 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISG-VPLIVAINKID 179
+DTPGHE+F+ +R RG+ + D +LVV G+ PQT E++ I G P ++A+NKID
Sbjct: 554 IDTPGHESFSNLRTRGSSLCDFAILVVDIMHGLEPQTIESLK-LLIKGKTPFVIALNKID 612
Query: 180 KL 181
+L
Sbjct: 613 RL 614
Score = 131 (51.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 45/129 (34%), Positives = 66/129 (51%)
Query: 927 IIAHVDHGKTTLIDHLLR---QSGTFRK-NQNINARIMDSNEI-EKERGITIFSKNCSIE 981
++ HVD GKT ++D + R Q G Q I A + + I E+ R + F ++ ++
Sbjct: 489 VLGHVDTGKTKMLDTIRRTNVQQGEAGGITQQIGATEVPAEAIKERCRQVRGFLQD-QMK 547
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G IIDTPGH F R S+ D +L++D + G PQT + K L G P
Sbjct: 548 IPG--FLIIDTPGHESFSNLRTRGSSLCDFAILVVDIMHGLEPQT-IESLKLLIKGKTPF 604
Query: 1042 VV-VNKIDR 1049
V+ +NKIDR
Sbjct: 605 VIALNKIDR 613
Score = 110 (43.8 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 70/360 (19%), Positives = 140/360 (38%)
Query: 209 ISISAKTGVGINKLLENISLQAEI-LELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSG 267
+ SA G GI L+ I Q + K + ++E + G G V++ +G
Sbjct: 675 VPTSAFLGDGIGNLMAFIINQTQTKYAQKLAFSEELDATVMEVKAIPGLGTTIDVILVNG 734
Query: 268 TLRCSDIVVAGASYGRIRSMLNENGKNILEAGP--SIPVEIQGLTKVPFSGEELFVILNE 325
T+R D++V S G I + + E +L P + V+ + + G +L +
Sbjct: 735 TMRAGDVIVLTGSDGAITTQVRE----LLMPKPLKELRVKNEYIHYKEVKGARGVKVLAK 790
Query: 326 KKAREI-GLFRQGKFRDVKLSKQKLHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLTE 384
+ + GL R+ ++ + + N ++ + K + ++ GS E L E
Sbjct: 791 NLEKVLAGLPIYITDREDEVDYLRHEADRQLANALHAIRKKPEGVYVQASTLGSLEALLE 850
Query: 385 SLKNLSTDKVKIQVIHNAVGNINESDINLAIASK------AIIIGFNVRADASTRKLAQX 438
LK+ + + + G +++ D+ A A K A ++ F+V+ + + A
Sbjct: 851 FLKSQNIPYSNVNI-----GPVHKKDVQKASAMKEHKAEYACVLAFDVKVEREAQIFADH 905
Query: 439 XXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENL-LGLAEIRQVILVNKVSK-----IAG 492
L +++N L + + +L N V + G
Sbjct: 906 EGVKVFQADIIYHLQDAFLKYREELKEKARRDNEHLAIFPCKLRVLPNHVYNTRNPIVCG 965
Query: 493 CYILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAGFE-CERLSRIENQIQR 551
I G+++R + I + +K I+ G + S++R + V K G E C ++ + R
Sbjct: 966 VSIEAGIVKRGTPICV-PSKEGIFLGTISSVQRNNEEVPSAKQGEEVCIKIENTTGEAPR 1024
Score = 52 (23.4 bits), Expect = 4.4e-15, Sum P(4) = 4.4e-15
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 1079 VIY--TSALHGYANE-NSKARQGNM-IPLFEAILKYVPVHKDNSNNPL 1122
+IY A Y E KAR+ N + +F L+ +P H N+ NP+
Sbjct: 915 IIYHLQDAFLKYREELKEKARRDNEHLAIFPCKLRVLPNHVYNTRNPI 962
Score = 50 (22.7 bits), Expect = 4.4e-15, Sum P(4) = 4.4e-15
Identities = 19/82 (23%), Positives = 32/82 (39%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++ D TT + LL K + + E++ RG+ + +KN G
Sbjct: 743 VLTGSDGAITTQVRELLMPKPL--KELRVKNEYIHYKEVKGARGVKVLAKNLEKVLAGLP 800
Query: 987 INIIDTPGHADF-GGEVERILS 1007
I I D D+ E +R L+
Sbjct: 801 IYITDREDEVDYLRHEADRQLA 822
>UNIPROTKB|I3LKJ6 [details] [associations]
symbol:GFM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070125 "mitochondrial translational elongation"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HAMAP:MF_00054_B TIGRFAMs:TIGR00484 OMA:QEPGKGY
GO:GO:0070125 GeneTree:ENSGT00550000074911 EMBL:FP236433
Ensembl:ENSSSCT00000028063 Uniprot:I3LKJ6
Length = 756
Score = 236 (88.1 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 53/133 (39%), Positives = 75/133 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G K + + +MDS E+E++RGITI S
Sbjct: 55 ISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTL 114
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ + +
Sbjct: 115 WKDVNINIIDTPGHVDFTIEVERALRVLDGAILVLCAVGGVQCQTMTVNRQMQRYSVPFL 174
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR + P
Sbjct: 175 TFINKLDRMGSNP 187
Score = 121 (47.7 bits), Expect = 1.7e-08, Sum P(5) = 1.7e-08
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D +LV+ A GV QT
Sbjct: 103 GITIQSAATYTLWKDVNINIIDTPGHVDFTIEVERALRVLDGAILVLCAVGGVQCQTMTV 162
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
+ VP + INK+D++ N R Q + S+
Sbjct: 163 NRQMQRYSVPFLTFINKLDRMGSNPTRALQQMRSK 197
Score = 96 (38.9 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 43/140 (30%), Positives = 63/140 (45%)
Query: 1183 VNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGK 1242
V E +GDI + GI+ C + +GL M +I P I+ + S E K
Sbjct: 412 VEEVFAGDICALFGID--CASGDTFTNKENSGLSMESIHVPDPVISIAMKPSNKNDLE-K 468
Query: 1243 FITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSV 1301
F R D K + T++K ++I VSG GELHL I + M RE G
Sbjct: 469 FSKGIGRFTREDPTFKVHFD---TESK--ETI--VSGMGELHLEIYAQRMEREYGCPCIT 521
Query: 1302 SRPRVIFK-TLNGELYEPYE 1320
+P+V F+ T+ + P+E
Sbjct: 522 GKPKVAFRETITAPV--PFE 539
Score = 52 (23.4 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 18/88 (20%), Positives = 37/88 (42%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
+ EP ++ V QG ++ +N R G + + ++ + +P + G+ E
Sbjct: 650 ILEPIMSVEVIAPNEFQGPVIAGINRRHGVITGQD-GVEDYFTVYAEVPLNDMFGYSTEL 708
Query: 1375 ITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
+ T G G + + Y P ++ DL
Sbjct: 709 RSCTEGKGEYTMEYCRYQPCSPATQEDL 736
Score = 43 (20.2 bits), Expect = 1.7e-08, Sum P(5) = 1.7e-08
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 53 IGISAHIDSGKTTLTERV 70
Score = 42 (19.8 bits), Expect = 1.7e-08, Sum P(5) = 1.7e-08
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 674 LSSNNALKKIKYLLNAKKVG---YTGTLDPFATGLLPLCFGEATKFSNYLSEADK 725
L+ +++ +K K L+N+K+ + G G FG+ T NY E K
Sbjct: 333 LNQDDSQEKTKILMNSKRDDSHPFVGLAFKLEAGR----FGQLTYVRNYQGELKK 383
Score = 39 (18.8 bits), Expect = 3.4e-08, Sum P(5) = 3.4e-08
Identities = 20/82 (24%), Positives = 42/82 (51%)
Query: 295 ILEAGPSIPVEIQG--LTKVPFSGEELFVILNEKKARE---IGL-FR--QGKFRD---VK 343
++E P+ P E+Q + S E+ +++N K+ +GL F+ G+F V+
Sbjct: 317 VVEYLPN-PSEVQNYAILNQDDSQEKTKILMNSKRDDSHPFVGLAFKLEAGRFGQLTYVR 375
Query: 344 LSKQKLHKTENMFNDINKEKVK 365
+ +L K + ++N ++KV+
Sbjct: 376 NYQGELKKGDTIYNTRTRKKVR 397
>DICTYBASE|DDB_G0278815 [details] [associations]
symbol:eIF5b "eukaryotic translation initiation
factor 5B" species:44689 "Dictyostelium discoideum" [GO:0006184
"GTP catabolic process" evidence=IEA;ISS] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA;ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA;ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 dictyBase:DDB_G0278815
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GenomeReviews:CM000152_GR GO:GO:0006446 GO:GO:0003924
EMBL:AAFI02000024 GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
HSSP:O26359 eggNOG:COG0532 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 RefSeq:XP_641984.1 ProteinModelPortal:Q54XP6
STRING:Q54XP6 EnsemblProtists:DDB0234259 GeneID:8621716
KEGG:ddi:DDB_G0278815 KO:K03243 OMA:TRNANIR Uniprot:Q54XP6
Length = 1045
Score = 142 (55.0 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 30/46 (65%), Positives = 34/46 (73%)
Query: 63 AESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA 108
A+ R+PI+ I+GHVD GKTSLLD IR TNV EA GITQ IGA
Sbjct: 454 ADKSYRSPIICILGHVDTGKTSLLDKIRNTNVQGGEARGITQQIGA 499
Score = 141 (54.7 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGHE+F +R+RG+ + D+ +LV+ G+ QT E+I ++ P IVA+NK
Sbjct: 527 LLLIDTPGHESFNNLRSRGSGLCDLAILVIDIMHGLQAQTLESINLLRMRKTPFIVALNK 586
Query: 178 IDKL 181
+D++
Sbjct: 587 VDRI 590
Score = 136 (52.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 40/128 (31%), Positives = 65/128 (50%)
Query: 927 IIAHVDHGKTTLIDHLLR---QSGTFRK-NQNINARIMDSNEIEKERGITIFSKNCSIEY 982
I+ HVD GKT+L+D + Q G R Q I A + + I+++ F++ +++
Sbjct: 465 ILGHVDTGKTSLLDKIRNTNVQGGEARGITQQIGASFIPVDAIKEQT--KSFAEKIKMDF 522
Query: 983 NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP-I 1041
+ +IDTPGH F R + D +L+ID + G QT + L++ P I
Sbjct: 523 KLPGLLLIDTPGHESFNNLRSRGSGLCDLAILVIDIMHGLQAQT-LESINLLRMRKTPFI 581
Query: 1042 VVVNKIDR 1049
V +NK+DR
Sbjct: 582 VALNKVDR 589
Score = 109 (43.4 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 57/241 (23%), Positives = 107/241 (44%)
Query: 209 ISISAKTGVGINKL-LENISLQAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSG 267
+ SA TG GI+ L L I L +++ K T + ++E ++ +G G V++ +G
Sbjct: 650 VPTSANTGEGISDLMLVVIQLMQKLMLDKVEFTNQLQCTLLEVKVIEGFGTTIDVVLVNG 709
Query: 268 TLRCSDIVVAGASYGRIRSMLNENGKNILEAGP--SIPVEIQGLTKVPFS---GEELFVI 322
TL D +V G I + + +++L P V+ Q + G ++
Sbjct: 710 TLNEGDKIVVSGFNGPIETSI----RSLLTPPPLRESRVKSQFINHKSIRAAMGIKIVAP 765
Query: 323 LNEKKAREIGLFRQGKFRDV-KLSKQKLHKTENMFNDINKEKVKNLLIIIKTDVYGSREV 381
EK L G D+ K+ + + +++ ND+ + + + ++ GS E
Sbjct: 766 GLEKAVPGTSLHVVGPNDDIEKIRAEAKREVDSVLNDV---ETSGIGVSVQASTLGSLEA 822
Query: 382 LTESLKNLSTDKVKIQVIHNAVGNINESDI-NLAIA-SK----AIIIGFNVRADASTRKL 435
LK K+KI V + A+G +++ I N +I K AI++ F+V+ + S +
Sbjct: 823 FLNFLK-----KIKIPVANVAIGPVHKKHIMNASIMLDKDPKYAILLAFDVKIEESAIQA 877
Query: 436 A 436
A
Sbjct: 878 A 878
Score = 47 (21.6 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 32/176 (18%), Positives = 69/176 (39%)
Query: 1129 LEYSSYLGKIGIGRILSGRIKSLQDVVI-MNGPDDKPNKAKINQIRVFKGLDRVLVNEAL 1187
+ + S +GI + G K++ + + GP+D K + R +D VL +
Sbjct: 749 INHKSIRAAMGIKIVAPGLEKAVPGTSLHVVGPNDDIEKIRAEAKRE---VDSVLNDVET 805
Query: 1188 SGDIVLITGIEEICIGS--TICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFIT 1245
SG + ++ +GS + K +P+ N+ + ++N S + ++ K+
Sbjct: 806 SG---IGVSVQASTLGSLEAFLNFLKKIKIPVANVAIGPVHKKHIMNASIMLDKDPKYAI 862
Query: 1246 TRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSV 1301
+++ Q D++IY + + H + E +R E + V
Sbjct: 863 LLAFDVKIEESAIQAANEMKVQVLSDETIYLFEEKLKKHFGAIKEKLRAETASICV 918
>DICTYBASE|DDB_G0267766 [details] [associations]
symbol:gfm2 "mitochondrial translation elongation
factor G" species:44689 "Dictyostelium discoideum" [GO:0006414
"translational elongation" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0003746 "translation elongation factor
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 dictyBase:DDB_G0267766
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GenomeReviews:CM000150_GR GO:GO:0003924 GO:GO:0006184
EMBL:AAFI02000003 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
TIGRFAMs:TIGR00484 RefSeq:XP_647292.1 ProteinModelPortal:Q55G92
STRING:Q55G92 EnsemblProtists:DDB0234170 GeneID:8616098
KEGG:ddi:DDB_G0267766 InParanoid:Q55G92 OMA:INRNSTE
ProtClustDB:CLSZ2729357 Uniprot:Q55G92
Length = 765
Score = 243 (90.6 bits), Expect = 1.9e-20, Sum P(4) = 1.9e-20
Identities = 58/156 (37%), Positives = 88/156 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
IIAHVD GKTT + +L SG ++ ++ IMD ++E+ERGITI + +I +N
Sbjct: 44 IIAHVDAGKTTTCERMLYYSGLIKRIGEVHKGDTIMDYMKLERERGITIGAATVTIPWND 103
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RINI+DTPGH DF EVER + ++D + + D V G Q+ V +A + I +
Sbjct: 104 HRINIVDTPGHVDFTVEVERSVRVIDGGVAIFDGVAGVQAQSITVWNQAERYKVPRIAFI 163
Query: 1045 NKIDRSNARPEWVVDATFDLF-DKLCATEEQLDFPV 1079
NK+DR + +D T + D+L A + +P+
Sbjct: 164 NKMDREGSS----IDKTLKMMTDRLGANPLPIQWPL 195
Score = 121 (47.7 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 54/194 (27%), Positives = 88/194 (45%)
Query: 59 KNITAESLVR-APIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVT--NH 115
K T E ++ + ++ +G V G T ++DY++ GIT IGA V N
Sbjct: 52 KTTTCERMLYYSGLIKRIGEVHKGDT-IMDYMK-----LERERGIT--IGAATVTIPWND 103
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH FT R +V D V + GV Q+ A+ VP I I
Sbjct: 104 HRINIVDTPGHVDFTVEVERSVRVIDGGVAIFDGVAGVQAQSITVWNQAERYKVPRIAFI 163
Query: 176 NKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILEL 235
NK+D+ ++D+ + ++++++ GA+P + I G G S +++E+
Sbjct: 164 NKMDREGSSIDKTLK-MMTDRL------GANP-LPIQWPLGTGAK-----FSTVVDLIEM 210
Query: 236 KAPVTTPAKGVIIE 249
+ KG IIE
Sbjct: 211 NLISWSGEKGEIIE 224
Score = 73 (30.8 bits), Expect = 1.9e-20, Sum P(4) = 1.9e-20
Identities = 52/235 (22%), Positives = 93/235 (39%)
Query: 1111 VPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKA-KI 1169
+P+ D + L + + G I R+ SG +K+ + I N +A K+
Sbjct: 348 IPIKSDTKGELVALAF-KVVHDPRRGLIVYTRVYSGILKAGTN--IYNSTRKSRERATKL 404
Query: 1170 NQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTIC-DPSKPNGLPMLNIDEPTLTIN 1228
Q+ + D + E +GDI I G++ + G T+ D K + + I P +
Sbjct: 405 LQVSASEMDD---IQELKAGDIGAILGLKNVSTGDTLVRDFDKAPKIILNGIKTPP-PVF 460
Query: 1229 FMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTIL 1288
F + + I I + D +VT DD +SG GELHL I+
Sbjct: 461 FCTLEANSESEIPQLIDALTILQKEDPSFH----FQVT----DDQNILISGMGELHLEII 512
Query: 1289 IENMRREGYELSVSRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGG 1343
+ + +++ SR + G + ++ F +E + GI + N + G
Sbjct: 513 KDRLDNH-FKVD-SRMGKMQVQYRGSISYSSQSTF---DEADDGINQSEFNIQTG 562
Score = 65 (27.9 bits), Expect = 1.9e-20, Sum P(4) = 1.9e-20
Identities = 18/95 (18%), Positives = 41/95 (43%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLN-YRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNE 1373
+ EP + + ++E G ++ L+ R G + ++ + + + + +P + +IG+ +
Sbjct: 671 ILEPLMKIEITVDEKYLGNVLSDLSRQRRGTILDVGMEKNTHI-ISAIVPLKEMIGYSTQ 729
Query: 1374 FITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNG 1408
+ T G S F Y + K + K G
Sbjct: 730 LRSFTSGNASFSMEFSSYGKVSSSEKDKVLKEIRG 764
Score = 45 (20.9 bits), Expect = 1.9e-20, Sum P(4) = 1.9e-20
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 386 LKNLSTDKVKIQVIHNAVGN 405
LKNL +K++ +I N++ N
Sbjct: 2 LKNLCNNKIRKNLIQNSIRN 21
Score = 42 (19.8 bits), Expect = 3.7e-20, Sum P(4) = 3.7e-20
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 51 SFLLNEYNKNITAESLVRAPIVTIMGHVDHGKTS 84
S LN+ KN++ + + + I+ HVD GKT+
Sbjct: 23 SSFLNQ-TKNVSNQ-INNYRNIGIIAHVDAGKTT 54
>DICTYBASE|DDB_G0288373 [details] [associations]
symbol:efbA "elongation factor 2" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0009617 "response to bacterium" evidence=IEP]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003746 "translation elongation factor activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 dictyBase:DDB_G0288373
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0045335 GO:GO:0009617 GO:GO:0003924 GO:GO:0006184
GenomeReviews:CM000154_GR GO:GO:0003746 EMBL:AAFI02000111
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 KO:K03234 EMBL:M26017 PIR:A34347 RefSeq:XP_636721.1
ProteinModelPortal:P15112 SMR:P15112 STRING:P15112 PRIDE:P15112
EnsemblProtists:DDB0191363 GeneID:8626597 KEGG:ddi:DDB_G0288373
OMA:ITAPENA ProtClustDB:PTZ00416 Uniprot:P15112
Length = 839
Score = 243 (90.6 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 56/138 (40%), Positives = 79/138 (57%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
++IAHVDHGKTTL D L++++G + + R M E+ERGITI S + S+ +
Sbjct: 23 SVIAHVDHGKTTLSDSLIQRAGIIADKVSGDMRYMSCRADEQERGITIKSSSVSLHFEMP 82
Query: 986 R--------------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTR 1031
+ IN+ID+PGH DF EV L + D L++ID VEG QT V R
Sbjct: 83 KEDKLPAGCTSHEFLINLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETVLR 142
Query: 1032 KALKLGFKPIVVVNKIDR 1049
+A+ KP++ VNK+DR
Sbjct: 143 QAVAERIKPVLFVNKVDR 160
Score = 95 (38.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 113 TNHGS-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPL 171
T+H I +D+PGH F++ +VTD ++V+ +GV QT + A +
Sbjct: 92 TSHEFLINLIDSPGHVDFSSEVTAALRVTDGALVVIDCVEGVCVQTETVLRQAVAERIKP 151
Query: 172 IVAINKIDKLDINL 185
++ +NK+D+ + L
Sbjct: 152 VLFVNKVDRFLLEL 165
Score = 92 (37.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 50/210 (23%), Positives = 92/210 (43%)
Query: 1111 VPVHKDNSNNPLQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMN-----GPDDKP 1164
V + K + N PL + + + +S G+ GR+ SG I++ Q V IM G D
Sbjct: 365 VAIQKCDPNGPLMMYVSKMVPTSDKGRFYAFGRVFSGIIRTGQKVRIMGVNYVPGKKDDL 424
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNID-E 1222
I + + G + + G+IV + G+++ + S TI + + ++
Sbjct: 425 FLKSIQRTVLMMGRKTEQIEDCPCGNIVGLVGVDQFLVKSGTITTSEVAHNIRVMKFSVS 484
Query: 1223 PTLTINFMVNN-SPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
P + + N S L K + +K RL K++ + + + I V+G G
Sbjct: 485 PVVRVAVEPKNPSDLP----KLV--EGLK-RL---AKSDPCVLCYSEESGEHI--VAGAG 532
Query: 1282 ELHLTILIENMRRE--GYELSVSRPRVIFK 1309
ELHL I ++++ + G E+ + P V F+
Sbjct: 533 ELHLEICLKDLAEDHAGIEIKTTDPVVSFR 562
>UNIPROTKB|C9IZ01 [details] [associations]
symbol:GFM1 "Elongation factor G, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924
GO:GO:0006184 GO:GO:0005622 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022
SUPFAM:SSF54980 HOGENOM:HOG000231585 TIGRFAMs:TIGR00484
EMBL:AC080013 HGNC:HGNC:13780 ChiTaRS:GFM1 EMBL:AC025033
IPI:IPI00788871 ProteinModelPortal:C9IZ01 SMR:C9IZ01 STRING:C9IZ01
Ensembl:ENST00000478576 UCSC:uc003fcd.3 ArrayExpress:C9IZ01
Bgee:C9IZ01 Uniprot:C9IZ01
Length = 591
Score = 236 (88.1 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 53/133 (39%), Positives = 75/133 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G K + + +MDS E+E++RGITI S
Sbjct: 51 ISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTM 110
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ + +
Sbjct: 111 WKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFL 170
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR + P
Sbjct: 171 TFINKLDRMGSNP 183
Score = 125 (49.1 bits), Expect = 3.3e-08, Sum P(5) = 3.3e-08
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 99 GITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTV 158
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ N R Q + S+
Sbjct: 159 NRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSK 193
Score = 99 (39.9 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 54/197 (27%), Positives = 83/197 (42%)
Query: 1115 KDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRV 1174
+DNS+ P LE + G++ R G +K D + K ++ ++
Sbjct: 347 RDNSH-PFVGLAFKLEVGRF-GQLTYVRSYQGELKK-GDTIYNTRTRKKVRLQRLARMHA 403
Query: 1175 FKGLDRVLVNEALSGDIVLITGIEEICI-GSTICDPSKPNGLPMLNIDEPTLTINFMVNN 1233
D V E +GDI + GI+ C G T D + +GL M +I P I+ +
Sbjct: 404 DMMED---VEEVYAGDICALFGID--CASGDTFTDKAN-SGLSMESIHVPDPVISIAMKP 457
Query: 1234 SPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMR 1293
S E KF R D K T+NK +++ +SG GELHL I + +
Sbjct: 458 SNKNDLE-KFSKGIGRFTREDPTFKVYFD---TENK--ETV--ISGMGELHLEIYAQRLE 509
Query: 1294 RE-GYELSVSRPRVIFK 1309
RE G +P+V F+
Sbjct: 510 REYGCPCITGKPKVAFR 526
Score = 43 (20.2 bits), Expect = 3.3e-08, Sum P(5) = 3.3e-08
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 49 IGISAHIDSGKTTLTERV 66
Score = 40 (19.1 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 1102 PLFEAILKYVP 1112
PL +A+L+Y+P
Sbjct: 308 PLLDAVLEYLP 318
Score = 40 (19.1 bits), Expect = 2.8e-14, Sum P(3) = 2.8e-14
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 1151 LQDVVIMNGPDDKPNKAKI 1169
+Q+ I+N DD K KI
Sbjct: 323 VQNYAILNKEDDSKEKTKI 341
Score = 37 (18.1 bits), Expect = 3.3e-08, Sum P(5) = 3.3e-08
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 752 NIPNSIEIIEKILINFHGKISQI 774
N +++IE+ I F G QI
Sbjct: 210 NFKGIVDLIEERAIYFDGDFGQI 232
Score = 37 (18.1 bits), Expect = 6.4e-08, Sum P(5) = 6.4e-08
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 1029 VTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFD 1063
+ R LK F P+ + + + +P ++DA +
Sbjct: 283 IRRATLKRSFTPVFLGSALKNKGVQP--LLDAVLE 315
>UNIPROTKB|A8WTI8 [details] [associations]
symbol:CBG02783 "Elongation factor G, mitochondrial"
species:6238 "Caenorhabditis briggsae" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0006184 "GTP catabolic process"
evidence=ISS] [GO:0070125 "mitochondrial translational elongation"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0003746 EMBL:HE601438
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231585 TIGRFAMs:TIGR00484
GO:GO:0070125 STRING:A8WTI8 EnsemblMetazoa:CBG02783
WormBase:CBG02783 Uniprot:A8WTI8
Length = 724
Score = 244 (91.0 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 61/166 (36%), Positives = 89/166 (53%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTT+ + +L +G + + MD E+E++RGITI S ++
Sbjct: 48 ISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMELERQRGITIQSAATYVD 107
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
++GT INIIDTPGH DF EVER L ++D +L++ V G QT V R+ + I
Sbjct: 108 WHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNRQLARYNVPFI 167
Query: 1042 VVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
VNK+DR+ A P +D L +KL + P+ S +G
Sbjct: 168 CFVNKMDRNGASPLKALDG---LRNKLNHNAALVHLPIGKDSNFNG 210
Score = 108 (43.1 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 32/82 (39%), Positives = 39/82 (47%)
Query: 101 GIT-QHIGAYNVVTNHGS-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTR 158
GIT Q Y V HG+ I +DTPGH FT R +V D VLV+ GV QT
Sbjct: 96 GITIQSAATY--VDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTF 153
Query: 159 EAIAHAKISGVPLIVAINKIDK 180
VP I +NK+D+
Sbjct: 154 TVNRQLARYNVPFICFVNKMDR 175
Score = 85 (35.0 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 50/204 (24%), Positives = 86/204 (42%)
Query: 1117 NSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFK 1176
N++ P LE Y G++ R+ G++ S D V + D + K ++ ++
Sbjct: 343 NNDKPFVGLAFKLEAGKY-GQLTYFRVYQGQL-SKGDTVYASR-DGR--KVRVQRLVRMH 397
Query: 1177 GLDRVLVNEALSGDIVLITGIEEIC-IGSTIC-DPSKPNGLPMLNIDEPTLTINFMVNNS 1234
D + A +GDI G++ C G T D + ++I EP +++ N
Sbjct: 398 AADMEEITTAYAGDICATFGLD--CHSGETFSTDQNLAPHCESMHIPEPVISMAIKPVNR 455
Query: 1235 PLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRR 1294
A K +T R K D + R + ++I VSG GELHL I + M+
Sbjct: 456 KDADNFIKALT-RFTKE--DPTFR-----REYNQEAKETI--VSGMGELHLEIYAQRMKS 505
Query: 1295 E-GYELSVSRPRVIFKTLNGELYE 1317
E + + +P V ++ G Y+
Sbjct: 506 EYNCPVELGKPSVAYRECLGAPYK 529
Score = 52 (23.4 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAP 1393
+ G+ +E +LT G G S + YAP
Sbjct: 667 MFGYTSELRSLTEGKGEFSMEYSRYAP 693
Score = 41 (19.5 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT++ + I
Sbjct: 46 IGISAHIDSGKTTVTERI 63
>POMBASE|SPAC56F8.03 [details] [associations]
symbol:SPAC56F8.03 "translation initiation factor IF2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0003924
"GTPase activity" evidence=ISO] [GO:0005525 "GTP binding"
evidence=IC] [GO:0005829 "cytosol" evidence=IDA] [GO:0006413
"translational initiation" evidence=ISO] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISO] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS01176 PomBase:SPAC56F8.03 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 EMBL:CU329670 GO:GO:0003924
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0002183
eggNOG:COG0532 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 KO:K03243 HOGENOM:HOG000105770 OMA:VMGVIVE
PIR:T38913 RefSeq:NP_593218.1 ProteinModelPortal:Q10251
STRING:Q10251 PRIDE:Q10251 EnsemblFungi:SPAC56F8.03.1
GeneID:2543241 KEGG:spo:SPAC56F8.03 OrthoDB:EOG40311D
NextBio:20804263 Uniprot:Q10251
Length = 1079
Score = 152 (58.6 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 114 NHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
N + +DTPGHE+FT +R+RG + +I +LV+ G+ PQT E+I + P +V
Sbjct: 547 NIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVIDIMHGLEPQTIESIRLLRDQKTPFVV 606
Query: 174 AINKIDKL----DINLDRIKQDLISEQ 196
A+NK+D+L I D QD +S+Q
Sbjct: 607 ALNKVDRLYGWHSIK-DNAIQDSLSKQ 632
Score = 146 (56.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 45/128 (35%), Positives = 66/128 (51%)
Query: 927 IIAHVDHGKTTLIDHLLR---QSGTFRK-NQNINARIMDSNEIEKERGITIFSKNCSIEY 982
I+ HVD GKT L+D+L R Q G Q I A I+++ + +K ++Y
Sbjct: 489 ILGHVDTGKTKLLDNLRRSNVQEGEAGGITQQIGATYFPIESIKQKTKVV--NKKGKLQY 546
Query: 983 NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
N + IIDTPGH F R S+ + +L+ID + G PQT + + L+ P V
Sbjct: 547 NIPGLLIIDTPGHESFTNLRSRGTSLCNIAILVIDIMHGLEPQT-IESIRLLRDQKTPFV 605
Query: 1043 V-VNKIDR 1049
V +NK+DR
Sbjct: 606 VALNKVDR 613
Score = 142 (55.0 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 29/46 (63%), Positives = 36/46 (78%)
Query: 63 AESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA 108
+ES +R+PI I+GHVD GKT LLD +R++NV EAGGITQ IGA
Sbjct: 478 SESDLRSPICCILGHVDTGKTKLLDNLRRSNVQEGEAGGITQQIGA 523
Score = 95 (38.5 bits), Expect = 3.7e-20, Sum P(3) = 3.7e-20
Identities = 76/352 (21%), Positives = 141/352 (40%)
Query: 209 ISISAKTGVGINKLLEN-ISLQAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSG 267
+ SA++G G+ L+ ISL + + T + ++E ++ +G G V++ +G
Sbjct: 674 VPTSAQSGEGVPDLVALLISLTQTRMSDRIKYITTLECTVLEVKVIEGLGATIDVILSNG 733
Query: 268 TLRCSDIVV----AGASYGRIRSMLNENGKNILEAGPSIP--VEIQGLTKVPFSGEELFV 321
L D +V G +R++L + + EI+ V +L
Sbjct: 734 VLHEGDRIVLCGMGGPIITTVRALLTPQPLKEMRVKSAYVHHKEIKAAMGVKICANDL-- 791
Query: 322 ILNEKKAREIGLFRQGKFRDVK-LSKQKLHKTENMFNDINKEKVKNLLIIIKTDVYGSRE 380
EK L G D + L+++ + EN+ I+ + + ++ GS E
Sbjct: 792 ---EKAVAGSRLLVVGPDDDEEDLAEEIMEDLENLLGRIDTSGIG---VSVQASTLGSLE 845
Query: 381 VLTESLKNLSTDKVKIQVIHNAVGNINESDIN-----LAIASK-AIIIGFNVRADASTRK 434
L E LK + KI V +G + + D+ L A + A+++ F+V+ D
Sbjct: 846 ALLEFLKQM-----KIPVASVNIGPVYKKDVMRCATMLEKAKEYALMLCFDVKVDRDAED 900
Query: 435 LAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKENLLGLAE----IRQVILVNKVSKI 490
LA+ + ++ +K+E +A ++ V NK I
Sbjct: 901 LAEQLGVKIFSANVIYHLFDAFTAHQKKILE-QKREESSDVAVFPCVLKTVAAFNKRDPI 959
Query: 491 A-GCYILEGLIRRDSKI---RILRN--KNIIWTGELDSLKRFKDNVKEVKAG 536
G ++EG++R ++ I + L N II G + SL+ V +VK G
Sbjct: 960 ILGVDVVEGVLRINTPIVAVKQLPNGEPQIIELGRVASLEMNHKPVDKVKKG 1011
Score = 51 (23.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 13/54 (24%), Positives = 31/54 (57%)
Query: 141 DIVVLVVAADDGVMPQTREAIAHAKI-SGVPLIVAINKIDKLDIN---LDRIKQ 190
D ++L V +GV+ +A ++ +G P I+ + ++ L++N +D++K+
Sbjct: 957 DPIILGVDVVEGVLRINTPIVAVKQLPNGEPQIIELGRVASLEMNHKPVDKVKK 1010
Score = 43 (20.2 bits), Expect = 7.7e-15, Sum P(3) = 7.7e-15
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 951 KNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVD 1010
K + + + EI+ G+ I + + G+R+ ++ P D E I+ ++
Sbjct: 764 KEMRVKSAYVHHKEIKAAMGVKICANDLEKAVAGSRLLVVG-PDD-DEEDLAEEIMEDLE 821
Query: 1011 NVLLLID 1017
N+L ID
Sbjct: 822 NLLGRID 828
Score = 40 (19.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 673 GLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLL 706
GLS+ +K Y N KK +GT ++G+L
Sbjct: 341 GLSNGEKKQKPVYT-NKKKSNRSGTSSISSSGIL 373
Score = 38 (18.4 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 961 DSNEIEKERGITIFSKN 977
D+ ++ ++ G+ IFS N
Sbjct: 897 DAEDLAEQLGVKIFSAN 913
>UNIPROTKB|E2R4T4 [details] [associations]
symbol:GFM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
KO:K02355 OMA:EEYTGGI CTD:84340 GeneTree:ENSGT00550000074890
EMBL:AAEX03001537 EMBL:AAEX03001538 RefSeq:XP_535276.2
Ensembl:ENSCAFT00000013183 GeneID:478101 KEGG:cfa:478101
Uniprot:E2R4T4
Length = 780
Score = 236 (88.1 bits), Expect = 3.8e-20, Sum P(4) = 3.8e-20
Identities = 62/172 (36%), Positives = 94/172 (54%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L SG R +++ + D E+ERGITI S + ++ G
Sbjct: 75 IMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDWKG 134
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R+N+IDTPGH DF EVER L ++D + + DA G QT V R+A K I +
Sbjct: 135 YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKVPRICFL 194
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKAR 1096
NK+D++ A ++ V++ + +KL A L P+ A G + SK +
Sbjct: 195 NKMDKTGASFKYAVES---IREKLKAKPLLLQLPLGEGKAFEGVVDVVSKEK 243
Score = 101 (40.6 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 35/106 (33%), Positives = 45/106 (42%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G VD G T + D++ + GIT A + +DTPGH FT
Sbjct: 100 LGDVDDGDT-VTDFMAQ-----ERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVE 153
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
R +V D V V A GV QT A VP I +NK+DK
Sbjct: 154 RCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKVPRICFLNKMDK 199
Score = 76 (31.8 bits), Expect = 3.8e-20, Sum P(4) = 3.8e-20
Identities = 27/128 (21%), Positives = 54/128 (42%)
Query: 1283 LHLTILIENMRREGYELSVSR-PRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYR 1341
LH I+ VSR + K + ++ EP NL V + ++ L R
Sbjct: 650 LHSLIIHPGTSTTMISACVSRCVQKALKKADKQVLEPLMNLEVTVPGDYLSPVLADLAQR 709
Query: 1342 GGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
G ++ I+ ++ ++ + + +P ++G+ TLT G+ + Y + +
Sbjct: 710 RGTIQEIQTRQENKIVIGF-VPLAEIMGYSTVLRTLTSGSATFALELSNYQAMNPQDQSI 768
Query: 1402 LGKRRNGV 1409
L RR+G+
Sbjct: 769 LLSRRSGL 776
Score = 67 (28.6 bits), Expect = 3.8e-20, Sum P(4) = 3.8e-20
Identities = 30/121 (24%), Positives = 54/121 (44%)
Query: 1102 PLFEAILKYVPVHKDNSNNPLQ-----LQIISLE--YSSYLGKIGIGRILSGRIKSLQDV 1154
PL +AI Y+P ++ + LQ L +S + + G + RI SG IK +
Sbjct: 340 PLLDAITMYLPSPEERNYEFLQWYKGDLCALSFKVLHDKQRGPLVFMRIYSGTIKPQSAI 399
Query: 1155 VIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNG 1214
+NG + +I+++ + + + +G+I L G++ G TI SK +
Sbjct: 400 YNINGNCTE----RISRLLLPFADQHIEIPSLTAGNIALTVGLKHTATGDTIAS-SKSSA 454
Query: 1215 L 1215
L
Sbjct: 455 L 455
Score = 60 (26.2 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 45/191 (23%), Positives = 80/191 (41%)
Query: 1136 GKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLIT 1195
G + RI SG IK + +NG + +I+++ + + + +G+I L
Sbjct: 381 GPLVFMRIYSGTIKPQSAIYNINGNCTE----RISRLLLPFADQHIEIPSLTAGNIALTV 436
Query: 1196 GIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSP----LAG---REGKFITTRQ 1248
G++ G TI SK + L E N+ LAG E F T +
Sbjct: 437 GLKHTATGDTIAS-SKSSALAAARRAEREGEKKHRQNSEAERLLLAGVEIPEPVFFCTIE 495
Query: 1249 ---IKNR--LDHEIK----NNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYE 1298
+ + LD+ +K + L+V + D + G GELH+ I+ + ++RE G E
Sbjct: 496 PPSVAKQPDLDYALKCLQREDPSLKVKLDP-DSGQTILCGMGELHIEIIHDRIKREYGLE 554
Query: 1299 LSVSRPRVIFK 1309
+ +V ++
Sbjct: 555 TYLGPLQVAYR 565
Score = 45 (20.9 bits), Expect = 3.8e-20, Sum P(4) = 3.8e-20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 65 SLVRAPI-----VTIMGHVDHGKTSLLDYI 89
S++ PI + IM H+D GKT+ + I
Sbjct: 61 SIISPPIAKIRNIGIMAHIDAGKTTTTERI 90
>TIGR_CMR|CJE_1245 [details] [associations]
symbol:CJE_1245 "tRNA pseudouridine synthase B"
species:195099 "Campylobacter jejuni RM1221" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0009982 "pseudouridine synthase
activity" evidence=ISS] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR020103 Pfam:PF01509 GO:GO:0003723
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0008033
eggNOG:COG0130 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
KO:K03177 PANTHER:PTHR13767 TIGRFAMs:TIGR00431 HOGENOM:HOG000231225
RefSeq:YP_179233.1 ProteinModelPortal:Q5HU02 STRING:Q5HU02
GeneID:3231752 KEGG:cjr:CJE1245 PATRIC:20044286 OMA:KKSFRNE
ProtClustDB:PRK04099 BioCyc:CJEJ195099:GJC0-1271-MONOMER
Uniprot:Q5HU02
Length = 272
Score = 253 (94.1 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 70/208 (33%), Positives = 100/208 (48%)
Query: 670 KPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSEADKYYEA 729
KP GLSSN L +K KK GY+GTLDPFA G+L + FG+ TK +L + K Y+A
Sbjct: 9 KPKGLSSNAFLSTLKKKYKNKKAGYSGTLDPFAKGVLIVAFGQYTKLFRFLKKTPKTYKA 68
Query: 730 IIHLGITTETGDIEGKIIDFNKNIPN-SIEIIEKILINFHGKISQIPPMYSALKYKGIPL 788
+ LG+ + + D + I +NI + +++I+ G IS PP +SA + G
Sbjct: 69 TLWLGVYSLSLDDQN--IKEIQNIKEFDLANLKQIIDQMQGIISYTPPQFSAKRINGTRA 126
Query: 789 YKYARSGXXXXXXXXXXXXXXXXXXXXXXPYLTLRIHCSKGTYIRVLSEDIGKMLGCGAH 848
Y+ A+ G P+L + I S+G YIR E + LG A
Sbjct: 127 YELAKKGIEANLKPCQMEVFDCKILSYNHPFLNIEITVSEGAYIRSYCELFARKLGINAT 186
Query: 849 LKYLRRIGIDKLTL--DKCLNIDTIIKY 874
L L RI K +K LN+ +KY
Sbjct: 187 LSSLERIKEGKFVYNNEKSLNV---LKY 211
>SGD|S000004059 [details] [associations]
symbol:MEF1 "Mitochondrial elongation factor involved in
translational elongation" species:4932 "Saccharomyces cerevisiae"
[GO:0006414 "translational elongation" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=IMP] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IMP;IDA]
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0070125
"mitochondrial translational elongation" evidence=ISA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
UniPathway:UPA00345 SGD:S000004059 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924
GO:GO:0006184 EMBL:BK006945 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484 OMA:QEPGKGY
GO:GO:0070125 GeneTree:ENSGT00550000074911 OrthoDB:EOG4VT95B
EMBL:X58378 EMBL:X94607 EMBL:Z73241 EMBL:AY692944 PIR:S61642
RefSeq:NP_013170.1 ProteinModelPortal:P25039 SMR:P25039
IntAct:P25039 MINT:MINT-2788695 STRING:P25039 PaxDb:P25039
PeptideAtlas:P25039 EnsemblFungi:YLR069C GeneID:850758
KEGG:sce:YLR069C CYGD:YLR069c NextBio:966903 Genevestigator:P25039
GermOnline:YLR069C Uniprot:P25039
Length = 761
Score = 217 (81.4 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 60/171 (35%), Positives = 88/171 (51%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTF------RKNQNINARIMDSNEIEKERGITIFSKN--C 978
I AH+D GKTT + +L + R N+ A+ MDS ++E+E+GITI S C
Sbjct: 75 ISAHIDSGKTTFTERVLYYTKRIKAIHEVRGRDNVGAK-MDSMDLEREKGITIQSAATYC 133
Query: 979 SIEYNGTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKL 1036
S + G N+IDTPGH DF EVER L ++D +L++ AV G QT V R+ +
Sbjct: 134 SWDKEGKNYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRY 193
Query: 1037 GFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
+ +NK+DR + P ++ L KL + P+ S+L G
Sbjct: 194 NVPRVTFINKMDRMGSDPFRAIE---QLNSKLKIPAAAVQIPIGSESSLSG 241
Score = 132 (51.5 bits), Expect = 9.8e-12, Sum P(4) = 9.8e-12
Identities = 47/134 (35%), Positives = 65/134 (48%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH FT R +V D VLVV A GV QT + VP + INK+D+
Sbjct: 147 IDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDR 206
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVG--INKL-LENISLQAEILELKA 237
+ + R + L S+ IP P S S+ +GV IN++ + N EI+E K
Sbjct: 207 MGSDPFRAIEQLNSKLKIPAA-AVQIPIGSESSLSGVVDLINRVAIYNKGDNGEIIE-KG 264
Query: 238 PVTTPAKGVIIESR 251
PV K ++ E R
Sbjct: 265 PVPENLKPLMEEKR 278
Score = 102 (41.0 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 63/250 (25%), Positives = 106/250 (42%)
Query: 1081 YTSALHGYANENSKARQGNMIPLFEAILKYVP-------VHKDNSNNPLQLQIISLEYSS 1133
+T L G A N+ + P+ +AI+ Y+P D SNN ++ ++
Sbjct: 320 FTPVLMGSALANTGIQ-----PVLDAIVDYLPNPSEVLNTALDVSNNEAKVNLVPAVQQP 374
Query: 1134 YLG---KIGIG--------RILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVL 1182
++G K+ G R+ GR++ + I N K K K+ ++ +
Sbjct: 375 FVGLAFKLEEGKYGQLTYVRVYQGRLR--KGNYITNVKTGK--KVKVARLVRMHSSEMED 430
Query: 1183 VNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGK 1242
V+E SG+I GI+ G T D S + + + + ++++ + NS A K
Sbjct: 431 VDEVGSGEICATFGID-CASGDTFTDGSVQYSMSSMYVPDAVVSLS-ITPNSKDASNFSK 488
Query: 1243 FITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYE--VSGRGELHLTILIENMRRE-GYEL 1299
+ NR K + RV K D E +SG GELHL I +E MRRE +
Sbjct: 489 AL------NRFQ---KEDPTFRV---KFDPESKETIISGMGELHLEIYVERMRREYNVDC 536
Query: 1300 SVSRPRVIFK 1309
+P+V ++
Sbjct: 537 VTGKPQVSYR 546
Score = 61 (26.5 bits), Expect = 4.0e-20, Sum P(3) = 4.0e-20
Identities = 21/79 (26%), Positives = 32/79 (40%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
+ EP N+ V QG ++ LN +++ E N + L+ + GF
Sbjct: 664 IMEPIMNVSVTSPNEFQGNVIGLLNKLQAVIQDTE-NGHDEFTLKAECALSTMFGFATSL 722
Query: 1375 ITLTRGTGLISHVFEEYAP 1393
T+G G S F YAP
Sbjct: 723 RASTQGKGEFSLEFSHYAP 741
Score = 51 (23.0 bits), Expect = 9.8e-12, Sum P(4) = 9.8e-12
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 48 DPESFLLNEYNKNITAESLVRAPIVTIMG---HVDHGKTSLLD---YIRKTNVVFSEAGG 101
+ E L++E + +T + + R + +G H+D GKT+ + Y K E G
Sbjct: 46 EEEKVLVDEIKQKLTPDDIGRCNKLRNIGISAHIDSGKTTFTERVLYYTKRIKAIHEVRG 105
Query: 102 ITQHIGA 108
++GA
Sbjct: 106 -RDNVGA 111
>UNIPROTKB|Q969S9 [details] [associations]
symbol:GFM2 "Ribosome-releasing factor 2, mitochondrial"
species:9606 "Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003746 "translation
elongation factor activity" evidence=IDA] [GO:0070125
"mitochondrial translational elongation" evidence=IDA] [GO:0032790
"ribosome disassembly" evidence=IDA] [GO:0032543 "mitochondrial
translation" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0003924 EMBL:CH471084 GO:GO:0032543 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0032790
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
HOGENOM:HOG000231585 KO:K02355 OMA:RKATINM CTD:84340
OrthoDB:EOG4NKBV3 EMBL:AF367997 EMBL:AY453587 EMBL:AK025314
EMBL:AF111808 EMBL:BC015712 EMBL:BC030612 IPI:IPI00071703
IPI:IPI00172648 IPI:IPI00216419 IPI:IPI00945410 IPI:IPI00946969
RefSeq:NP_115756.2 RefSeq:NP_733781.1 RefSeq:NP_733792.1
UniGene:Hs.277154 ProteinModelPortal:Q969S9 SMR:Q969S9
IntAct:Q969S9 STRING:Q969S9 PhosphoSite:Q969S9 DMDM:28201798
PaxDb:Q969S9 PRIDE:Q969S9 Ensembl:ENST00000296805
Ensembl:ENST00000345239 Ensembl:ENST00000427854
Ensembl:ENST00000509430 GeneID:84340 KEGG:hsa:84340 UCSC:uc003kdh.1
UCSC:uc003kdi.1 UCSC:uc003kdj.1 GeneCards:GC05M074052
HGNC:HGNC:29682 HPA:HPA036863 MIM:606544 neXtProt:NX_Q969S9
PharmGKB:PA134949527 InParanoid:Q969S9 PhylomeDB:Q969S9
ChiTaRS:GFM2 GenomeRNAi:84340 NextBio:74121 ArrayExpress:Q969S9
Bgee:Q969S9 CleanEx:HS_GFM2 Genevestigator:Q969S9
GermOnline:ENSG00000164347 Uniprot:Q969S9
Length = 779
Score = 234 (87.4 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 58/155 (37%), Positives = 88/155 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L SG R +++ + D E+ERGITI S + ++ G
Sbjct: 75 IMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDWKG 134
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R+N+IDTPGH DF EVER L ++D + + DA G QT V R+A K I +
Sbjct: 135 YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHNIPRICFL 194
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
NK+D++ A ++ V++ + +KL A L P+
Sbjct: 195 NKMDKTGASFKYAVES---IREKLKAKPLLLQLPI 226
Score = 102 (41.0 bits), Expect = 6.0e-06, Sum P(4) = 6.0e-06
Identities = 34/106 (32%), Positives = 45/106 (42%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G VD G T + D++ + GIT A + +DTPGH FT
Sbjct: 100 LGDVDDGDT-VTDFMAQ-----ERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVE 153
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
R +V D V V A GV QT A +P I +NK+DK
Sbjct: 154 RCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHNIPRICFLNKMDK 199
Score = 79 (32.9 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 22/101 (21%), Positives = 46/101 (45%)
Query: 1309 KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
K + ++ EP NL V + ++ L R G+++ I+ + +V + + +P ++
Sbjct: 679 KKADKQVLEPLMNLEVTVARDYLSPVLADLAQRRGNIQEIQTRQDNKVVIGF-VPLAEIM 737
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
G+ TLT G+ + Y + + L RR+G+
Sbjct: 738 GYSTVLRTLTSGSATFALELSTYQAMNPQDQNTLLNRRSGL 778
Score = 64 (27.6 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 47/191 (24%), Positives = 80/191 (41%)
Query: 1136 GKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLIT 1195
G + RI SG IK + +NG + +I+++ + V + +G+I L
Sbjct: 381 GPLVFMRIYSGTIKPQLAIHNINGNCTE----RISRLLLPFADQHVEIPSLTAGNIALTV 436
Query: 1196 GIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSP----LAG---REGKFITTRQ 1248
G++ G TI SK + L E NN LAG E F T +
Sbjct: 437 GLKHTATGDTIVS-SKSSALAAARRAEREGEKKHRQNNEAERLLLAGVEIPEPVFFCTIE 495
Query: 1249 ---IKNR--LDHEIK----NNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYE 1298
+ + L+H +K + L+V + D + G GELH+ I+ + ++RE G E
Sbjct: 496 PPSLSKQPDLEHALKCLQREDPSLKVRLDP-DSGQTVLCGMGELHIEIIHDRIKREYGLE 554
Query: 1299 LSVSRPRVIFK 1309
+ +V ++
Sbjct: 555 TYLGPLQVAYR 565
Score = 59 (25.8 bits), Expect = 1.6e-19, Sum P(4) = 1.6e-19
Identities = 29/121 (23%), Positives = 53/121 (43%)
Query: 1102 PLFEAILKYVPVHKDNSNNPLQL---QIISLEYS----SYLGKIGIGRILSGRIKSLQDV 1154
PL +A+ Y+P ++ + LQ + +L + G + RI SG IK +
Sbjct: 340 PLLDAVTMYLPSPEERNYEFLQWYKDDLCALAFKVLHDKQRGPLVFMRIYSGTIKPQLAI 399
Query: 1155 VIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNG 1214
+NG + +I+++ + V + +G+I L G++ G TI SK +
Sbjct: 400 HNINGNCTE----RISRLLLPFADQHVEIPSLTAGNIALTVGLKHTATGDTIVS-SKSSA 454
Query: 1215 L 1215
L
Sbjct: 455 L 455
Score = 46 (21.3 bits), Expect = 4.8e-20, Sum P(4) = 4.8e-20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 65 SLVRAPI-----VTIMGHVDHGKTSLLDYI 89
S++ PI + IM H+D GKT+ + I
Sbjct: 61 SIINPPIAKIRNIGIMAHIDAGKTTTTERI 90
Score = 44 (20.5 bits), Expect = 6.0e-06, Sum P(4) = 6.0e-06
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 253 DKGKGPVATVLIQSGTLR 270
DK +GP+ + I SGT++
Sbjct: 377 DKQRGPLVFMRIYSGTIK 394
>UNIPROTKB|P60785 [details] [associations]
symbol:lepA "elongation factor 4" species:83333
"Escherichia coli K-12" [GO:0006412 "translation" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009651 "response to salt stress"
evidence=IMP] [GO:0009409 "response to cold" evidence=IMP]
[GO:0009268 "response to pH" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IEA;IDA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IDA] [GO:0003746 "translation elongation
factor activity" evidence=IDA] HAMAP:MF_00071 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006297
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0009651
GO:GO:0009409 GO:GO:0003924 GO:GO:0009268 GO:GO:0003746 EMBL:D64044
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 EMBL:K00426 PIR:H65034 RefSeq:NP_417064.1
RefSeq:YP_490797.1 PDB:3CB4 PDB:3DEG PDBsum:3CB4 PDBsum:3DEG
ProteinModelPortal:P60785 SMR:P60785 DIP:DIP-29868N IntAct:P60785
MINT:MINT-1225739 PaxDb:P60785 PRIDE:P60785
EnsemblBacteria:EBESCT00000000357 EnsemblBacteria:EBESCT00000016683
GeneID:12931602 GeneID:947051 KEGG:ecj:Y75_p2522 KEGG:eco:b2569
PATRIC:32120537 EchoBASE:EB0524 EcoGene:EG10529
BioCyc:EcoCyc:EG10529-MONOMER BioCyc:ECOL316407:JW2553-MONOMER
EvolutionaryTrace:P60785 Genevestigator:P60785 Uniprot:P60785
Length = 599
Score = 256 (95.2 bits), Expect = 4.9e-20, Sum P(3) = 4.9e-20
Identities = 54/144 (37%), Positives = 91/144 (63%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+IIAH+DHGK+TL D +++ G ++ + A+++DS ++E+ERGITI +++ +++Y +
Sbjct: 8 SIIAHIDHGKSTLSDRIIQICGGL-SDREMEAQVLDSMDLERERGITIKAQSVTLDYKAS 66
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
++N IDTPGH DF EV R L+ + LL++DA +G QT A+++ +
Sbjct: 67 DGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEV 126
Query: 1041 IVVVNKIDRSNARPEWVVDATFDL 1064
+ V+NKID A PE V + D+
Sbjct: 127 VPVLNKIDLPAADPERVAEEIEDI 150
Score = 166 (63.5 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 51/171 (29%), Positives = 86/171 (50%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ F+DTPGH F+ +R + +LVV A GV QT A + ++ +NK
Sbjct: 73 LNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEVVPVLNK 132
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID + +R+ +++ E ++ + A+ + SAKTGVG+ +LE L +I +
Sbjct: 133 IDLPAADPERVAEEI--EDIVGID---ATDAVRCSAKTGVGVQDVLER--LVRDIPPPEG 185
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD---IVVAGASYGRIR 285
P + +II+S D G V+ + I++GTLR D ++ G +Y R
Sbjct: 186 DPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDKVKVMSTGQTYNADR 236
Score = 75 (31.5 bits), Expect = 4.9e-20, Sum P(3) = 4.9e-20
Identities = 50/219 (22%), Positives = 96/219 (43%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDD 1162
+ E +++ +P + + PLQ II + +YLG + + RI +G ++ V +M+
Sbjct: 172 VLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDKVKVMS-TGQ 230
Query: 1163 KPNKAKINQIRVFKGLDRVLVNEALSGDIV-LITGIEEIC---IGSTICDPSKP--NGLP 1216
N ++ I K +DR E G++ L+ I++I +G T+ P LP
Sbjct: 231 TYNADRLG-IFTPKQVDRT---ELKCGEVGWLVCAIKDIHGAPVGDTLTLARNPAEKALP 286
Query: 1217 MLNIDEPTLTIN-FMVNNSPL-AGRE--GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDD 1272
+P + F V++ A R+ GK ++ + E + +G
Sbjct: 287 GFKKVKPQVYAGLFPVSSDDYEAFRDALGK-LSLNDASLFYEPESSSALGFG-------- 337
Query: 1273 SIYEVSGRGELHLTILIENMRREGYELSV--SRPRVIFK 1309
+ G LH+ I+ E + RE Y+L + + P V+++
Sbjct: 338 --FRCGFLGLLHMEIIQERLERE-YDLDLITTAPTVVYE 373
Score = 54 (24.1 bits), Expect = 4.0e-08, Sum P(3) = 4.0e-08
Identities = 9/17 (52%), Positives = 14/17 (82%)
Query: 73 TIMGHVDHGKTSLLDYI 89
+I+ H+DHGK++L D I
Sbjct: 8 SIIAHIDHGKSTLSDRI 24
Score = 40 (19.1 bits), Expect = 4.9e-20, Sum P(3) = 4.9e-20
Identities = 24/112 (21%), Positives = 45/112 (40%)
Query: 1414 YSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDL-LVNPIKEKQLTNIRSSG 1472
Y+ + ++ D R+ + N + + + H RDN + EK I
Sbjct: 465 YASLDYNFKRFQASDMVRVDVLINGERVDALALITH-RDNSQNRGRELVEKMKDLIPRQQ 523
Query: 1473 SDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFL-KENERKKKL 1523
D AIQ I ++ + + L + +I +K+ L K+ E KK++
Sbjct: 524 FDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQKQKEGKKRM 575
>UNIPROTKB|E1BEJ3 [details] [associations]
symbol:GFM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070125 "mitochondrial translational elongation"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HAMAP:MF_00054_B TIGRFAMs:TIGR00484 OMA:QEPGKGY
GO:GO:0070125 GeneTree:ENSGT00550000074911 EMBL:DAAA02002456
IPI:IPI00693563 Ensembl:ENSBTAT00000040085 Uniprot:E1BEJ3
Length = 756
Score = 235 (87.8 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 53/133 (39%), Positives = 75/133 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G K + + +MDS E+E++RGITI S
Sbjct: 54 ISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTM 113
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ + +
Sbjct: 114 WKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMRRYNVPFL 173
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR + P
Sbjct: 174 TFINKLDRVGSNP 186
Score = 121 (47.7 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 33/95 (34%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 102 GITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTV 161
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
+ VP + INK+D++ N R Q + S+
Sbjct: 162 NRQMRRYNVPFLTFINKLDRVGSNPARALQQMRSK 196
Score = 95 (38.5 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 64/229 (27%), Positives = 98/229 (42%)
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGK---------IGIG-RILSGRIKSL 1151
PL +A+L+Y+P + N + Q S E + L +G+ ++ +GR L
Sbjct: 311 PLLDAVLEYLPNPSEVQNYAILNQDDSQEKTKILMNPKRDSSHPFVGLAFKLEAGRFGQL 370
Query: 1152 QDVVIMNGP----DDKPNKAKINQIRVFKGL----DRVL-VNEALSGDIVLITGIEEICI 1202
V G D+ N ++RV + + D + V E +GDI + GI+ C
Sbjct: 371 TYVRNYQGELKKGDNIYNTRTRKKVRVQRLVRMHADMMEDVEEVFAGDICALFGID--CA 428
Query: 1203 -GSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNI 1261
G T + +GL M +I P I+ + S E KF R D K +
Sbjct: 429 SGDTFTNKDN-SGLSMESIHVPDPVISIAMKPSNKNDLE-KFSKGIGRFTREDPTFKVHF 486
Query: 1262 GLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK 1309
T +K ++I VSG GELHL I + M RE G +P+V F+
Sbjct: 487 D---TDSK--ETI--VSGMGELHLEIYAQRMEREYGCPCITGKPKVAFR 528
Score = 43 (20.2 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 52 IGISAHIDSGKTTLTERV 69
>UNIPROTKB|F1NDP6 [details] [associations]
symbol:GFM1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] InterPro:IPR000795 InterPro:IPR005225
Pfam:PF00009 PRINTS:PR00315 PROSITE:PS00301 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
GeneTree:ENSGT00550000074911 EMBL:AADN02021077 IPI:IPI00591900
Ensembl:ENSGALT00000032988 ArrayExpress:F1NDP6 Uniprot:F1NDP6
Length = 218
Score = 234 (87.4 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 54/137 (39%), Positives = 77/137 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G + + + +MDS E+E++RGITI S
Sbjct: 39 ISAHIDSGKTTLTERVLFYTGRIAQMHEVRGKDGVGAVMDSMELERQRGITIQSAATYTM 98
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ T INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ + +
Sbjct: 99 WKDTNINIIDTPGHVDFTIEVERSLRVLDGAILVLCAVGGVQCQTITVNRQMKRYNVPFL 158
Query: 1042 VVVNKIDRSNARPEWVV 1058
+NK+DR + P V
Sbjct: 159 TFINKLDRMGSSPSRAV 175
Score = 120 (47.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/95 (33%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D +LV+ A GV QT
Sbjct: 87 GITIQSAATYTMWKDTNINIIDTPGHVDFTIEVERSLRVLDGAILVLCAVGGVQCQTITV 146
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ + R Q + S+
Sbjct: 147 NRQMKRYNVPFLTFINKLDRMGSSPSRAVQQMRSK 181
Score = 46 (21.3 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 37 MGHVAHASKLNDPESFLLNEYNKNITAE-SLVRAPIVTIMGHVDHGKTSLLDYI 89
M A++ FLLN + +A R + I H+D GKT+L + +
Sbjct: 1 MLRAVRAARGRGQRQFLLNACRRCSSAVLPNERIRNIGISAHIDSGKTTLTERV 54
>DICTYBASE|DDB_G0270482 [details] [associations]
symbol:gfm1 "mitochondrial translation elongation
factor G" species:44689 "Dictyostelium discoideum" [GO:0006414
"translational elongation" evidence=IEA;ISS] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0003746 "translation elongation
factor activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
dictyBase:DDB_G0270482 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 KO:K02355 TIGRFAMs:TIGR00484 OMA:QEPGKGY
RefSeq:XP_645887.1 HSSP:Q5SHN5 ProteinModelPortal:Q55E94
STRING:Q55E94 PRIDE:Q55E94 EnsemblProtists:DDB0234169
GeneID:8616829 KEGG:ddi:DDB_G0270482 ProtClustDB:CLSZ2729275
Uniprot:Q55E94
Length = 734
Score = 249 (92.7 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 69/204 (33%), Positives = 106/204 (51%)
Query: 893 FGIIYLSDLLSKRFLHGQNLF----LSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGT 948
FG + L ++++ + +G N F S ++ L I AH+D GKTTL + +L +G
Sbjct: 9 FGGLALRNVMNNK--NGINSFGLRCFSTNSVSGLRNIGISAHIDSGKTTLTERILYYTGR 66
Query: 949 FRKNQNINARI-----MDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVE 1003
++ + + MDS ++E+E+GITI S ++ INIIDTPGH DF EVE
Sbjct: 67 IKEIHEVRGKDGVGAKMDSMDLEREKGITIQSAATYCKWGENHINIIDTPGHVDFTIEVE 126
Query: 1004 RILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFD 1063
R L ++D +L++ V G QT V R+ + +V +NK+DR+ A P V++
Sbjct: 127 RALRVLDGAVLVMCGVSGVQSQTITVDRQMRRYNVPRVVFINKLDRTGANPWNVIE---Q 183
Query: 1064 LFDKLCATEEQLDFPVIYTSALHG 1087
L KL L P+ S L G
Sbjct: 184 LRKKLNLNAIALQVPIGKESNLEG 207
Score = 112 (44.5 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 30/84 (35%), Positives = 37/84 (44%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A I +DTPGH FT R +V D VLV+ GV QT
Sbjct: 93 GITIQSAATYCKWGENHINIIDTPGHVDFTIEVERALRVLDGAVLVMCGVSGVQSQTITV 152
Query: 161 IAHAKISGVPLIVAINKIDKLDIN 184
+ VP +V INK+D+ N
Sbjct: 153 DRQMRRYNVPRVVFINKLDRTGAN 176
Score = 95 (38.5 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 64/311 (20%), Positives = 125/311 (40%)
Query: 1020 EGPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATF--DLFDK--LCATEEQL 1075
E P FV K ++L + + +D + EW+++ F ++ D+ L A +
Sbjct: 230 EIPSNFVEFVKEKKMEL----VETIANVD--DELGEWMIENDFPNNMPDEKTLTAAIRRT 283
Query: 1076 DFPVIYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQI------ISL 1129
+ G A +N+ + PL + ++KY+P + L + + L
Sbjct: 284 TIARKVVPVMMGSAFKNTGVQ-----PLLDGVIKYLPSPNEKKIIALDTSVKDKETEVEL 338
Query: 1130 EYSSYLGKIGIG-RILSGRIKSLQDVVIMNGPDDKPNKAK-INQIRVFKGLDRVLVNEAL 1187
E +G+ ++ GR L + + G + + K +N + K + R++ A
Sbjct: 339 ESDPKKPFVGLAFKLEEGRFGQLTYMRVYQGTLKRGDTIKNVNLGKTIK-VPRLVKMHAS 397
Query: 1188 SGDIVLITGIEEICI--------GSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGR 1239
+ V G EIC G+T + + +++ EP ++++ + +
Sbjct: 398 EMEEVSEVGPGEICAMFGVDCYSGNTFTHQNCSYTMTSMHVPEPVMSLSIQPKS-----K 452
Query: 1240 EGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYE 1298
+G+ L K + RV ++ I +SG GELHL I +E M+RE E
Sbjct: 453 DGQ----ANFSKALSKFQKEDPTFRVKSDQESGQII-ISGMGELHLEIYVERMKREYNVE 507
Query: 1299 LSVSRPRVIFK 1309
+P V ++
Sbjct: 508 TVTGKPLVAYR 518
Score = 79 (32.9 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 23/90 (25%), Positives = 42/90 (46%)
Query: 1312 NGE--LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIG 1369
+GE + EP + + + + QG ++ +N R G + N + E + E +P + G
Sbjct: 630 DGEPTILEPIMKVEISLPQEFQGTVISGVNRRKGAIVNTT-TQGESLTFECEVPLNNMFG 688
Query: 1370 FQNEFITLTRGTGLISHVFEEYAPFYNKSK 1399
+ E ++T+G G S EY N S+
Sbjct: 689 YSTELRSMTQGKGEFSM---EYLKHTNVSR 715
Score = 46 (21.3 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 33 LVEEMGHVAHASKLNDPESFLLNEYN-KNITAESLVRAPIVTIMGHVDHGKTSLLDYI 89
L G +A + +N+ +N + + + S+ + I H+D GKT+L + I
Sbjct: 5 LTSRFGGLALRNVMNNKNG--INSFGLRCFSTNSVSGLRNIGISAHIDSGKTTLTERI 60
>UNIPROTKB|A6QNM2 [details] [associations]
symbol:GFM2 "Ribosome-releasing factor 2, mitochondrial"
species:9913 "Bos taurus" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0032790 "ribosome disassembly" evidence=ISS]
[GO:0032543 "mitochondrial translation" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0032543 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0032790
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
HOGENOM:HOG000231585 KO:K02355 OMA:EEYTGGI EMBL:BC148895
IPI:IPI00867463 RefSeq:NP_001095579.1 UniGene:Bt.62475
ProteinModelPortal:A6QNM2 STRING:A6QNM2 PRIDE:A6QNM2
Ensembl:ENSBTAT00000054796 GeneID:527467 KEGG:bta:527467 CTD:84340
GeneTree:ENSGT00550000074890 InParanoid:A6QNM2 OrthoDB:EOG4NKBV3
NextBio:20874601 ArrayExpress:A6QNM2 Uniprot:A6QNM2
Length = 777
Score = 229 (85.7 bits), Expect = 1.0e-19, Sum P(4) = 1.0e-19
Identities = 61/163 (37%), Positives = 88/163 (53%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L SG R +++ + D E+ERGITI S + ++ G
Sbjct: 75 IMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDWKG 134
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RIN+IDTPGH DF EVER L ++D + + DA G QT V R+A K I +
Sbjct: 135 YRINLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKVPRICFL 194
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
NK+D+ A + V++ + +KL A L P+ A G
Sbjct: 195 NKMDKIGASFNYAVES---IREKLKAKPLLLQLPIGEGKAFKG 234
Score = 104 (41.7 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 36/107 (33%), Positives = 46/107 (42%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G VD G T + D++ + GIT A I +DTPGH FT
Sbjct: 100 LGDVDDGDT-VTDFMAQ-----ERERGITIQSAAVTFDWKGYRINLIDTPGHVDFTLEVE 153
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKL 181
R +V D V V A GV QT A VP I +NK+DK+
Sbjct: 154 RCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKVPRICFLNKMDKI 200
Score = 81 (33.6 bits), Expect = 1.0e-19, Sum P(4) = 1.0e-19
Identities = 22/101 (21%), Positives = 46/101 (45%)
Query: 1309 KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
K + ++ EP NL V + ++ L R G+++ I+ + +V + Y +P ++
Sbjct: 677 KKADKQILEPLMNLEVTVSREYLSPVLADLAQRRGNIQEIQSRQDNKVVIGY-VPLAEIM 735
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
G+ TLT G+ + Y + + L +R+G+
Sbjct: 736 GYSTVLRTLTSGSATFALELSNYQAMNPQDQSTLLSQRHGL 776
Score = 64 (27.6 bits), Expect = 1.0e-19, Sum P(4) = 1.0e-19
Identities = 52/232 (22%), Positives = 96/232 (41%)
Query: 1102 PLFEAILKYVPVHKDNSNNPLQL---QIISLEYS----SYLGKIGIGRILSGRIKSLQDV 1154
PL +AI Y+P ++ + LQ + +L + G + RI SG +K +
Sbjct: 340 PLLDAITMYLPSPEERNYEFLQWYKGDLCALAFKVLHDKQRGPLVFMRIYSGMLKPQTAI 399
Query: 1155 VIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNG 1214
+NG + +++++ + + + +G+I L G++ G TI S+ +
Sbjct: 400 HNINGNCTE----RVSRLLLPFADQHIEIPLLTAGNIALTVGLKHTATGDTIVS-SRSSA 454
Query: 1215 LPMLNIDEPTLTINFMVNNSP----LAG---REGKFITTRQIKNR-----LDHEIK---- 1258
L + NN LAG E F T + + LDH +K
Sbjct: 455 LAASRRAKREGEKKQKENNEAERLLLAGVEIPEPVFFCTIEPPSMAKQPDLDHALKCLQR 514
Query: 1259 NNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK 1309
+ L+V + D + G GELH+ I+ + ++RE G E + +V ++
Sbjct: 515 EDPSLKVKLDP-DSGQTVLCGMGELHIEIIHDRIKREYGLETYLGPLQVAYR 565
Score = 46 (21.3 bits), Expect = 1.0e-19, Sum P(4) = 1.0e-19
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 65 SLVRAPI-----VTIMGHVDHGKTSLLDYI 89
S++ PI + IM H+D GKT+ + I
Sbjct: 61 SIINPPIAKIRNIGIMAHIDAGKTTTTERI 90
Score = 40 (19.1 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 253 DKGKGPVATVLIQSGTLR 270
DK +GP+ + I SG L+
Sbjct: 377 DKQRGPLVFMRIYSGMLK 394
>UNIPROTKB|Q9KPB0 [details] [associations]
symbol:lepA "Elongation factor 4" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006184
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596 ProtClustDB:PRK05433
PIR:D82073 RefSeq:NP_232092.1 ProteinModelPortal:Q9KPB0 SMR:Q9KPB0
DNASU:2613005 GeneID:2613005 KEGG:vch:VC2463 PATRIC:20083947
Uniprot:Q9KPB0
Length = 597
Score = 251 (93.4 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 53/144 (36%), Positives = 89/144 (61%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+IIAH+DHGK+TL D L++ G ++ + +++DS ++E+ERGITI +++ +++Y
Sbjct: 8 SIIAHIDHGKSTLSDRLIQVCGGL-SDREMAEQVLDSMDLERERGITIKAQSVTLDYTAK 66
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
++N IDTPGH DF EV R L+ + LL++DA +G QT A+++ +
Sbjct: 67 DGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMDLEV 126
Query: 1041 IVVVNKIDRSNARPEWVVDATFDL 1064
+ ++NKID A PE V + D+
Sbjct: 127 VPILNKIDLPAAEPERVAEEIEDI 150
Score = 157 (60.3 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 49/168 (29%), Positives = 86/168 (51%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ F+DTPGH F +R + +LVV A GV QT A + ++ +NK
Sbjct: 73 LNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMDLEVVPILNK 132
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID +R+ +++ E ++ + A + SAKTGVG++++LE I + I +
Sbjct: 133 IDLPAAEPERVAEEI--EDIVGID---AIDAVRCSAKTGVGVDEVLEKIV--SAIPAPQG 185
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD---IVVAGASYG 282
P + +II+S D G V+ V I++G+L+ +D ++ G ++G
Sbjct: 186 DPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDKIKVMSTGQTWG 233
Score = 78 (32.5 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMN 1158
+ E I+ +P + + + PLQ II + +YLG + + RI +G +K + +M+
Sbjct: 172 VLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDKIKVMS 227
Score = 52 (23.4 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ H+DHGK++L D
Sbjct: 8 SIIAHIDHGKSTLSD 22
Score = 39 (18.8 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 46/248 (18%), Positives = 96/248 (38%)
Query: 1281 GELHLTILIENMRREGYELSV--SRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKL 1338
G LH+ I+ E + RE Y+L + + P V+++ L Y + + IN +++
Sbjct: 344 GMLHMEIIQERLERE-YDLDLITTAPTVVYEVLKTNKEIVYVDSPAKLPAINDIEEIREP 402
Query: 1339 NYRGGDLKNIE-INEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNK 1397
R L + + + +E R ++ N+ + LT + V + F+++
Sbjct: 403 IARCNILVPADYLGNVITLCIEKRGTQVDMVYHGNQ-VALTYDIPMAEVVLD----FFDR 457
Query: 1398 SKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLV 1457
K G Y+ + +++ R+ + N + + I H ++
Sbjct: 458 LK----STSRG-----YASLDYGFQRFEMSHMVRVDVLLNGDKVDALAIITHRDNSQTRG 508
Query: 1458 NPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKEN 1517
+ EK I D AIQ I ++ + + L + ++ +K+ LK+
Sbjct: 509 RQLVEKMKEFIPRQMFDIAIQAAIGNHIIARSTVKQLRKNVLAKCYGGDVSRKKKLLKKQ 568
Query: 1518 ERKKKLHK 1525
+ KK K
Sbjct: 569 KEGKKRMK 576
>TIGR_CMR|VC_2463 [details] [associations]
symbol:VC_2463 "GTP-binding protein LepA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003924 GO:GO:0006184
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596 ProtClustDB:PRK05433
PIR:D82073 RefSeq:NP_232092.1 ProteinModelPortal:Q9KPB0 SMR:Q9KPB0
DNASU:2613005 GeneID:2613005 KEGG:vch:VC2463 PATRIC:20083947
Uniprot:Q9KPB0
Length = 597
Score = 251 (93.4 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 53/144 (36%), Positives = 89/144 (61%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+IIAH+DHGK+TL D L++ G ++ + +++DS ++E+ERGITI +++ +++Y
Sbjct: 8 SIIAHIDHGKSTLSDRLIQVCGGL-SDREMAEQVLDSMDLERERGITIKAQSVTLDYTAK 66
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
++N IDTPGH DF EV R L+ + LL++DA +G QT A+++ +
Sbjct: 67 DGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMDLEV 126
Query: 1041 IVVVNKIDRSNARPEWVVDATFDL 1064
+ ++NKID A PE V + D+
Sbjct: 127 VPILNKIDLPAAEPERVAEEIEDI 150
Score = 157 (60.3 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 49/168 (29%), Positives = 86/168 (51%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ F+DTPGH F +R + +LVV A GV QT A + ++ +NK
Sbjct: 73 LNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAIEMDLEVVPILNK 132
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID +R+ +++ E ++ + A + SAKTGVG++++LE I + I +
Sbjct: 133 IDLPAAEPERVAEEI--EDIVGID---AIDAVRCSAKTGVGVDEVLEKIV--SAIPAPQG 185
Query: 238 PVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD---IVVAGASYG 282
P + +II+S D G V+ V I++G+L+ +D ++ G ++G
Sbjct: 186 DPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDKIKVMSTGQTWG 233
Score = 78 (32.5 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMN 1158
+ E I+ +P + + + PLQ II + +YLG + + RI +G +K + +M+
Sbjct: 172 VLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDKIKVMS 227
Score = 52 (23.4 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 73 TIMGHVDHGKTSLLD 87
+I+ H+DHGK++L D
Sbjct: 8 SIIAHIDHGKSTLSD 22
Score = 39 (18.8 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 46/248 (18%), Positives = 96/248 (38%)
Query: 1281 GELHLTILIENMRREGYELSV--SRPRVIFKTLNGELYEPYENLFVDIEEINQGIIMQKL 1338
G LH+ I+ E + RE Y+L + + P V+++ L Y + + IN +++
Sbjct: 344 GMLHMEIIQERLERE-YDLDLITTAPTVVYEVLKTNKEIVYVDSPAKLPAINDIEEIREP 402
Query: 1339 NYRGGDLKNIE-INEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNK 1397
R L + + + +E R ++ N+ + LT + V + F+++
Sbjct: 403 IARCNILVPADYLGNVITLCIEKRGTQVDMVYHGNQ-VALTYDIPMAEVVLD----FFDR 457
Query: 1398 SKYDLGKRRNGVLISQYSGKAVAYSLWKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLV 1457
K G Y+ + +++ R+ + N + + I H ++
Sbjct: 458 LK----STSRG-----YASLDYGFQRFEMSHMVRVDVLLNGDKVDALAIITHRDNSQTRG 508
Query: 1458 NPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKEN 1517
+ EK I D AIQ I ++ + + L + ++ +K+ LK+
Sbjct: 509 RQLVEKMKEFIPRQMFDIAIQAAIGNHIIARSTVKQLRKNVLAKCYGGDVSRKKKLLKKQ 568
Query: 1518 ERKKKLHK 1525
+ KK K
Sbjct: 569 KEGKKRMK 576
>TAIR|locus:2030041 [details] [associations]
symbol:AT1G76720 "AT1G76720" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006413 "translational initiation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GO:GO:0003924 GO:GO:0006184
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156 KO:K03243
OMA:NESNGDK IPI:IPI01020587 RefSeq:NP_177798.3 UniGene:At.70343
ProteinModelPortal:F4I410 SMR:F4I410 PRIDE:F4I410
EnsemblPlants:AT1G76720.1 GeneID:844006 KEGG:ath:AT1G76720
ArrayExpress:F4I410 Uniprot:F4I410
Length = 1191
Score = 237 (88.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 58/131 (44%), Positives = 77/131 (58%)
Query: 67 VRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA-YNVVTNHGSIT------ 119
+R+ I IMGHVD GKT LLD IR TNV EAGGITQ IGA Y N T
Sbjct: 626 LRSIICCIMGHVDSGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAKNIRERTRELKAD 685
Query: 120 ---------FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
+DTPGHE+FT +R+RG+ + D+ +LVV G+ PQT E++ ++
Sbjct: 686 AKLKVPGLLVIDTPGHESFTNLRSRGSSLCDLAILVVDIKHGLEPQTIESLNLLRMRNTE 745
Query: 171 LIVAINKIDKL 181
I+A+NK+D+L
Sbjct: 746 FIIALNKVDRL 756
Score = 95 (38.5 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 64/280 (22%), Positives = 110/280 (39%)
Query: 200 EEYGGASPFISISAKTGVGI-NKLLENISLQAEILELKAPVTTPAKGVIIESRLDKGKGP 258
+E G + SAK+G G+ + LL + + + K + ++E ++ +G G
Sbjct: 807 KEMGETFSIVPTSAKSGEGVPDLLLWLVQWAQKTMVEKLTYVDEVQCTVLEVKVIEGHGT 866
Query: 259 VATVLIQSGTLRCSD-IVVAGAS---YGRIRSMLNENG-KNILEAGPSIP-VEIQGLTKV 312
V++ +G L D IVV G IR++L + K + G + EI+ +
Sbjct: 867 TIDVVLVNGELHEGDQIVVCGLQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGI 926
Query: 313 PFSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQK-LHKTENMFNDINKEKVKNLLIII 371
+ + L E L G D++ K+ + E++ + I+K + +
Sbjct: 927 KITAQGL-----EHAIAGTSLHVVGPDDDIEAMKESAMEDMESVLSRIDKSGEG---VYV 978
Query: 372 KTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDINLAIASKAIIIGFNVRADAS 431
+T GS E L E LK T V I V N SD A I+ F+V+
Sbjct: 979 QTSTLGSLEALLEFLK---TPAVNIPVSEGY--NEGWSDAREE-KEYATILAFDVKVTTE 1032
Query: 432 TRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIPLEKKEN 471
R+LA + + I N+ +KKE+
Sbjct: 1033 ARELADEMGVKIFCADIIYQLFNQFQVYIENIKEEKKKES 1072
Score = 49 (22.3 bits), Expect = 7.9e-15, Sum P(2) = 7.9e-15
Identities = 23/96 (23%), Positives = 39/96 (40%)
Query: 951 KNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVD 1010
K + + EI+ +GI I ++ GT ++++ P D E + ++
Sbjct: 906 KELRVKGTYLHHKEIKAAQGIKITAQGLEHAIAGTSLHVVG-PDD-DIEAMKESAMEDME 963
Query: 1011 NVLLLID-AVEGPMPQTRFVTRKALKLGFKPIVVVN 1045
+VL ID + EG QT + L F VN
Sbjct: 964 SVLSRIDKSGEGVYVQTSTLGSLEALLEFLKTPAVN 999
>RGD|631396 [details] [associations]
symbol:Gfm1 "G elongation factor, mitochondrial 1" species:10116
"Rattus norvegicus" [GO:0003746 "translation elongation factor
activity" evidence=IEA;ISO;ISS] [GO:0003924 "GTPase activity"
evidence=IEA;ISO;ISS] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0006184 "GTP catabolic
process" evidence=ISO] [GO:0070125 "mitochondrial translational
elongation" evidence=ISO;ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 RGD:631396 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484
GO:GO:0070125 GeneTree:ENSGT00550000074911 CTD:85476
OrthoDB:EOG4D52X3 EMBL:L14684 EMBL:CH473976 EMBL:BC085721
IPI:IPI00200610 PIR:S40780 RefSeq:NP_446077.1 UniGene:Rn.10913
ProteinModelPortal:Q07803 STRING:Q07803 PRIDE:Q07803
Ensembl:ENSRNOT00000042079 GeneID:114017 KEGG:rno:114017
UCSC:RGD:631396 InParanoid:Q5U347 NextBio:618156
ArrayExpress:Q07803 Genevestigator:Q07803
GermOnline:ENSRNOG00000012873 Uniprot:Q07803
Length = 751
Score = 231 (86.4 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 52/133 (39%), Positives = 75/133 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G + + +MDS E+E++RGITI S
Sbjct: 52 ISAHIDSGKTTLTERVLYYTGRIATMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTM 111
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V+R+ + +
Sbjct: 112 WRDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVSRQMKRYNVPFL 171
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR + P
Sbjct: 172 TFINKLDRMGSNP 184
Score = 126 (49.4 bits), Expect = 1.2e-08, Sum P(5) = 1.2e-08
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 100 GITIQSAATYTMWRDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTV 159
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ N R Q + S+
Sbjct: 160 SRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSK 194
Score = 88 (36.0 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
V E +GDI + GI+ C G T + + + +++ +P +++ +N +
Sbjct: 409 VEEVYAGDICALFGID--CASGDTFTNKDNSDLSMESIHVPDPVISVAMKPSNKNDLEKF 466
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I R D K + T++K ++I VSG GELHL I + M RE G
Sbjct: 467 SKGIARF---TREDPTFKVHFD---TESK--ETI--VSGMGELHLEIYAQRMEREYGCPC 516
Query: 1300 SVSRPRVIFK 1309
+P+V F+
Sbjct: 517 ITGKPKVAFR 526
Score = 55 (24.4 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
+ EP ++ V QG + +N R G + + E + L +P + G+ E
Sbjct: 645 IIEPIMSVEVIAPNEFQGAVFAGINRRHGVITGQDGIE-DYFTLYADVPLNNMFGYSTEL 703
Query: 1375 ITLTRGTGLISHVFEEYAP 1393
+ T G G + + Y P
Sbjct: 704 RSCTEGKGEYTMEYNRYQP 722
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(5) = 1.2e-08
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 50 IGISAHIDSGKTTLTERV 67
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(5) = 1.2e-08
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 674 LSSNNALKKIKYLLNAKKVG---YTGTLDPFATGLLPLCFGEATKFSNYLSEADK 725
L+ N++ +K K L+N K+ + G G FG+ T NY E K
Sbjct: 330 LNQNDSKEKNKILMNPKRDDSHPFVGLAFKLEAGR----FGQLTYVRNYQGELKK 380
>UNIPROTKB|Q07803 [details] [associations]
symbol:Gfm1 "Elongation factor G, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 RGD:631396 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484
GO:GO:0070125 GeneTree:ENSGT00550000074911 CTD:85476
OrthoDB:EOG4D52X3 EMBL:L14684 EMBL:CH473976 EMBL:BC085721
IPI:IPI00200610 PIR:S40780 RefSeq:NP_446077.1 UniGene:Rn.10913
ProteinModelPortal:Q07803 STRING:Q07803 PRIDE:Q07803
Ensembl:ENSRNOT00000042079 GeneID:114017 KEGG:rno:114017
UCSC:RGD:631396 InParanoid:Q5U347 NextBio:618156
ArrayExpress:Q07803 Genevestigator:Q07803
GermOnline:ENSRNOG00000012873 Uniprot:Q07803
Length = 751
Score = 231 (86.4 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 52/133 (39%), Positives = 75/133 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G + + +MDS E+E++RGITI S
Sbjct: 52 ISAHIDSGKTTLTERVLYYTGRIATMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTM 111
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V+R+ + +
Sbjct: 112 WRDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVSRQMKRYNVPFL 171
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR + P
Sbjct: 172 TFINKLDRMGSNP 184
Score = 126 (49.4 bits), Expect = 1.2e-08, Sum P(5) = 1.2e-08
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 100 GITIQSAATYTMWRDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTV 159
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ N R Q + S+
Sbjct: 160 SRQMKRYNVPFLTFINKLDRMGSNPARALQQMRSK 194
Score = 88 (36.0 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
V E +GDI + GI+ C G T + + + +++ +P +++ +N +
Sbjct: 409 VEEVYAGDICALFGID--CASGDTFTNKDNSDLSMESIHVPDPVISVAMKPSNKNDLEKF 466
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I R D K + T++K ++I VSG GELHL I + M RE G
Sbjct: 467 SKGIARF---TREDPTFKVHFD---TESK--ETI--VSGMGELHLEIYAQRMEREYGCPC 516
Query: 1300 SVSRPRVIFK 1309
+P+V F+
Sbjct: 517 ITGKPKVAFR 526
Score = 55 (24.4 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 18/79 (22%), Positives = 32/79 (40%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
+ EP ++ V QG + +N R G + + E + L +P + G+ E
Sbjct: 645 IIEPIMSVEVIAPNEFQGAVFAGINRRHGVITGQDGIE-DYFTLYADVPLNNMFGYSTEL 703
Query: 1375 ITLTRGTGLISHVFEEYAP 1393
+ T G G + + Y P
Sbjct: 704 RSCTEGKGEYTMEYNRYQP 722
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(5) = 1.2e-08
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 50 IGISAHIDSGKTTLTERV 67
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(5) = 1.2e-08
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 674 LSSNNALKKIKYLLNAKKVG---YTGTLDPFATGLLPLCFGEATKFSNYLSEADK 725
L+ N++ +K K L+N K+ + G G FG+ T NY E K
Sbjct: 330 LNQNDSKEKNKILMNPKRDDSHPFVGLAFKLEAGR----FGQLTYVRNYQGELKK 380
>ZFIN|ZDB-GENE-060201-3 [details] [associations]
symbol:gfm2 "G elongation factor, mitochondrial 2"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0032543
"mitochondrial translation" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0032790 "ribosome
disassembly" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 ZFIN:ZDB-GENE-060201-3 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0032543
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0032790 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
CTD:84340 GeneTree:ENSGT00550000074890 OrthoDB:EOG4NKBV3
EMBL:BX571730 EMBL:BC095886 EMBL:BC125896 IPI:IPI00513000
RefSeq:NP_001071013.1 UniGene:Dr.22910 ProteinModelPortal:A0JMI9
STRING:A0JMI9 PRIDE:A0JMI9 Ensembl:ENSDART00000016314 GeneID:558184
KEGG:dre:558184 InParanoid:A0JMI9 OMA:ELHLEVA NextBio:20882360
Bgee:A0JMI9 Uniprot:A0JMI9
Length = 762
Score = 218 (81.8 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 57/155 (36%), Positives = 84/155 (54%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L SG R +++ + D E+ERGITI S + ++
Sbjct: 61 IMAHIDAGKTTTTERMLYYSGYTRALGDVDDGDTVTDYMAQERERGITIQSAAVTFDWKD 120
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RIN+IDTPGH DF EVER L ++D + + DA G QT V R+A K + +
Sbjct: 121 YRINLIDTPGHVDFTLEVERALRVLDGAVAVFDASAGVEAQTMTVWRQAEKHQIPCVCFL 180
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
NK+D+ A + +D+ + KL A L P+
Sbjct: 181 NKMDKPAASLRYSLDS---IKAKLKANPVLLQIPI 212
Score = 126 (49.4 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 68/250 (27%), Positives = 103/250 (41%)
Query: 59 KNITAESLVRAPIVT-IMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGS 117
K T E ++ T +G VD G T + DY+ + GIT A
Sbjct: 69 KTTTTERMLYYSGYTRALGDVDDGDT-VTDYMAQ-----ERERGITIQSAAVTFDWKDYR 122
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +DTPGH FT R +V D V V A GV QT A+ +P + +NK
Sbjct: 123 INLIDTPGHVDFTLEVERALRVLDGAVAVFDASAGVEAQTMTVWRQAEKHQIPCVCFLNK 182
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASP-FISISAKTGVGINKLLENISLQAEILELK 236
+DK +L R D I ++ A+P + I +G L++ I+ Q + +
Sbjct: 183 MDKPAASL-RYSLDSIKAKL------KANPVLLQIPIGSGKSFTGLVDLITRQKMMWQGN 235
Query: 237 APVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIV-VAGASYGRIRSMLNENGKNI 295
A +T + I S L P VL+ R + I VA +L E G+N
Sbjct: 236 A-LTNDGRSFEINS-LQPSDDP--NVLLAVSEARAALIEQVADLDDDFAELLLGEYGENF 291
Query: 296 LEAGPSIPVE 305
+A P++ ++
Sbjct: 292 -DAVPAVKLQ 300
Score = 83 (34.3 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 31/129 (24%), Positives = 58/129 (44%)
Query: 1288 LIENMRRE-GYE---LSVSRPRVIFKTLN---GELYEPYENLFVDIEEINQGIIMQKLNY 1340
+I+N+R E G +S R + K L G++ EP L V + E + ++ L+
Sbjct: 634 VIQNVRLESGTSAAMVSACVSRCMLKALKQAGGQVLEPVMALEVTVGEEHLSSVLADLSQ 693
Query: 1341 RGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKY 1400
R G + +I+ + ++ L +P ++G+ TLT G S Y P ++ +
Sbjct: 694 RRGTICDIQSRQDNKILLA-DVPLAEMMGYSTVLRTLTSGNATFSLELSSYEPMNSQDQN 752
Query: 1401 DLGKRRNGV 1409
L + G+
Sbjct: 753 ILLNKMAGL 761
Score = 76 (31.8 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 47/226 (20%), Positives = 97/226 (42%)
Query: 1093 SKARQGNMIPLFEAILKYVPVHKDNSN-------NPLQLQIISLEYSSYLGKIGIGRILS 1145
S + + PL +AI Y+P + ++ N L + + G + RI S
Sbjct: 319 SSLKNKGVQPLLDAITAYLPAPNERNHDLVRWYKNDLCALAFKVVHDKQRGPLVFVRIYS 378
Query: 1146 GRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGST 1205
G +K+ V +N + + K++++ + ++ + +G+I L G+++ G T
Sbjct: 379 GSMKAQSSVHNINRNETE----KMSRLLLPFADQQIEIPSLSAGNIALTVGLKQTVTGDT 434
Query: 1206 ICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGK----FIT----TRQIKNRLDHEI 1257
I SK + + + +++ LAG E F + T + L+H +
Sbjct: 435 IVS-SKASAAAAIRRAQAEAESRSNSHSAALAGVEVPEPVFFCSIEPPTMAKQADLEHAL 493
Query: 1258 ----KNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYEL 1299
+ + L+V + D + G GELH+ I+ + ++RE Y++
Sbjct: 494 NCLQREDPSLKVRIDP-DSGQTVLCGMGELHIEIIHDRIKRE-YKI 537
Score = 42 (19.8 bits), Expect = 1.4e-19, Sum P(4) = 1.4e-19
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 72 VTIMGHVDHGKTS 84
+ IM H+D GKT+
Sbjct: 59 IGIMAHIDAGKTT 71
>POMBASE|SPBC660.10 [details] [associations]
symbol:SPBC660.10 "mitochondrial translation elongation
factor G (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=ISS;IDA] [GO:0006414 "translational elongation"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
PomBase:SPBC660.10 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 EMBL:CU329671 GO:GO:0003924
GO:GO:0006184 GenomeReviews:CU329671_GR GO:GO:0003746 GO:GO:0032543
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
KO:K02355 HOGENOM:HOG000231587 OrthoDB:EOG4GQTD4 PIR:T40622
RefSeq:NP_595089.1 ProteinModelPortal:O94429 STRING:O94429
EnsemblFungi:SPBC660.10.1 GeneID:2541108 KEGG:spo:SPBC660.10
OMA:DGASFKR NextBio:20802221 Uniprot:O94429
Length = 813
Score = 252 (93.8 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 63/175 (36%), Positives = 94/175 (53%)
Query: 913 FLSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERG 970
+ S+ +I + IIAH+D GKTTL + +L G N++ +MD E++RG
Sbjct: 19 YQSNISINSIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRG 78
Query: 971 ITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVT 1030
ITI S S + RIN+IDTPGHADF EVER ++++D + +ID G QT+ V
Sbjct: 79 ITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAGVEAQTKVVW 138
Query: 1031 RKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSAL 1085
++A K G ++ VNK+DR + + + + D C L PV Y+ L
Sbjct: 139 KQATKRGIPKVIFVNKMDRVGSSLGSTIRSIYTNLD--CPYPLVLQLPV-YSDGL 190
Score = 132 (51.5 bits), Expect = 7.9e-07, Sum P(3) = 7.9e-07
Identities = 36/125 (28%), Positives = 58/125 (46%)
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+T + L + G+VD G T ++DY+ GIT + A + + I
Sbjct: 44 LTEKMLYYGGFTSHFGNVDTGDT-VMDYLPA-----ERQRGITINSAAISFTWRNQRINL 97
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH FT R V D V ++ GV QT+ A G+P ++ +NK+D+
Sbjct: 98 IDTPGHADFTFEVERSVAVLDGAVAIIDGSAGVEAQTKVVWKQATKRGIPKVIFVNKMDR 157
Query: 181 LDINL 185
+ +L
Sbjct: 158 VGSSL 162
Score = 76 (31.8 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 60/275 (21%), Positives = 115/275 (41%)
Query: 1055 EWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANE---NSKARQGNMIPLFEAILKYV 1111
E + D + D L T ++L F +I + G S + + P+ +AI+ Y+
Sbjct: 252 ETLCDEYLENEDSLAFTNDRL-FKIIKQKTISGNVVPVLCGSSLKNIAVQPIMDAIIDYL 310
Query: 1112 P-----VHKDNSNNPLQLQIISLEYSSYLGKI-------GIGRILSGRIK--SLQDVVIM 1157
P K+ S +IISL+ L KI G + R+ +L ++M
Sbjct: 311 PSPVEFYEKNASKETSSDKIISLDKRPLLAKIFKVIHHASRGILTYVRVNEGTLSRGMMM 370
Query: 1158 NGPDDKPNKAKINQIRVFKGLDRVLVNEALS-GDIVLITGIEEICIGSTICDP-SKPNGL 1215
P K ++ I VF D+ + +S G+I +I+GI++ G I + + N
Sbjct: 371 FNPRTKKSERAIRLYNVFA--DQTQEVDCISAGNIGVISGIKQFHTGDIIINKENSKNFH 428
Query: 1216 PMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIY 1275
L+ ++ ++I V + + K + L + + + R TQ+ + +
Sbjct: 429 EYLSGNQSVISIPEPVCIASIEPYSLK--DEPALLEALANMNREDPSFRYTQDLENGQLL 486
Query: 1276 EVSGRGELHLTILIENMRRE-GYELSVSRPRVIFK 1309
+ G G +HL + E + E G S+ + +V ++
Sbjct: 487 -IQGMGIMHLQVSYERLVSEFGARASLGKVQVGYR 520
Score = 51 (23.0 bits), Expect = 5.6e-17, Sum P(3) = 5.6e-17
Identities = 31/125 (24%), Positives = 54/125 (43%)
Query: 1184 NEALSGDIVLITGIEEICIGS----TICD-PSKPNGLPMLNIDEPTLTINFMVNNSPLAG 1238
+E LSG+ +I+ E +CI S ++ D P+ L +N ++P+ + N L
Sbjct: 428 HEYLSGNQSVISIPEPVCIASIEPYSLKDEPALLEALANMNREDPSFRYTQDLENGQLL- 486
Query: 1239 REGKFITTRQIK-NRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGY 1297
+G I Q+ RL E L Q + +++ +VS T EN+ Y
Sbjct: 487 IQGMGIMHLQVSYERLVSEFGARASLGKVQVGYRETLIDVSFNSVTLSTENKENLIINVY 546
Query: 1298 ELSVS 1302
+ +S
Sbjct: 547 LIPIS 551
Score = 46 (21.3 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 1435 NHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAI 1477
N +L+ +I I ++ L E ++ +RS G ++ +
Sbjct: 537 NKENLIINVYLIPISDEGDETLKKYFSEGEIQKVRSKGQEDGV 579
Score = 38 (18.4 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 1213 NGLPMLNIDEPTLTINFMVNNSPLA 1237
+G P+ N+ +F+ N+ PL+
Sbjct: 619 HGFPLTNLQSFCTISSFLSNDFPLS 643
>GENEDB_PFALCIPARUM|PFF0115c [details] [associations]
symbol:PFF0115c "elongation factor G, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=IDA] [GO:0003746 "translation elongation factor activity"
evidence=ISS] [GO:0006414 "translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924
GO:GO:0006184 GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240 EMBL:AL844505
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0020011 InterPro:IPR009022
SMART:SM00838 SUPFAM:SSF54980 KO:K02355 OMA:GEICAFV
HOGENOM:HOG000231587 RefSeq:XP_966014.1 ProteinModelPortal:C6KSM4
EnsemblProtists:PFF0115c:mRNA GeneID:3885741 KEGG:pfa:PFF0115c
EuPathDB:PlasmoDB:PF3D7_0602400 ProtClustDB:CLSZ2433470
Uniprot:C6KSM4
Length = 937
Score = 218 (81.8 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 51/142 (35%), Positives = 83/142 (58%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARI--MDSNEIEKERGITIFSKNCSIEYNG 984
IIAH+D GKTT + +L + +K ++ + MD +IE+E+GITI + + +NG
Sbjct: 106 IIAHIDAGKTTTTERILYYTNVIKKIGEVHEGLSTMDYLDIEREKGITINAAVTTCYWNG 165
Query: 985 T-------RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLG 1037
+ RINIIDTPGH DF EVE+ L ++D +++ D+ EG Q+ V ++A +
Sbjct: 166 SEKNLEDYRINIIDTPGHVDFTAEVEKSLRVLDGGVVVFDSSEGVESQSETVWKQANQYN 225
Query: 1038 FKPIVVVNKIDRSNARPEWVVD 1059
I+ +NK+D+ A E ++
Sbjct: 226 ISRIIFLNKLDKVGANFEGCIE 247
Score = 114 (45.2 bits), Expect = 5.6e-09, Sum P(5) = 5.6e-09
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 59 KNITAESLVR-APIVTIMGHVDHGKTSL--LDYIRKTNVVFSEAGGITQHIGAYNVVTNH 115
K T E ++ ++ +G V G +++ LD R+ + + A G+ + ++
Sbjct: 114 KTTTTERILYYTNVIKKIGEVHEGLSTMDYLDIEREKGITINAAVTTCYWNGSEKNLEDY 173
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH FTA + +V D V+V + +GV Q+ A + I+ +
Sbjct: 174 -RINIIDTPGHVDFTAEVEKSLRVLDGGVVVFDSSEGVESQSETVWKQANQYNISRIIFL 232
Query: 176 NKIDKLDINLD 186
NK+DK+ N +
Sbjct: 233 NKLDKVGANFE 243
Score = 104 (41.7 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 47/185 (25%), Positives = 81/185 (43%)
Query: 1126 IISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNE 1185
I + +LG I RI G+I + I N K K I++I ++ +
Sbjct: 512 IYKIMNDQHLGNINYVRIYEGQIN--RGEFIYNNRTKKSEK--ISKIFFIHSSEKYELEN 567
Query: 1186 ALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFIT 1245
A +GDIV + G+++ IG T+ + L + D P + I++ + N E
Sbjct: 568 AKAGDIVGLVGLKDTQIGDTLSNVFLRAELKRIK-DIPPI-ISYYIYNKNKNEYEKLINA 625
Query: 1246 TRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRP 1304
+IK DH +I Q+ D +SG GELHL I+I + ++ + +P
Sbjct: 626 LIKIKKE-DHSFFYHIN----QDTKD---LLISGVGELHLQIIINKIEKDFNIPIIYGKP 677
Query: 1305 RVIFK 1309
++ +K
Sbjct: 678 QISYK 682
Score = 66 (28.3 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 16/78 (20%), Positives = 38/78 (48%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
L EP NL V + G ++ L + G +++I+ +++ + R P ++ + ++
Sbjct: 845 LLEPIMNLNVTVPTEYLGDVISDLVKKRGKIQHIDESDEFTKEITARAPMASVLSYVSDL 904
Query: 1375 ITLTRGTGLISHVFEEYA 1392
+T+G G + +Y+
Sbjct: 905 RKITKGRGNYTMTLHKYS 922
Score = 44 (20.5 bits), Expect = 3.8e-11, Sum P(4) = 3.8e-11
Identities = 36/166 (21%), Positives = 71/166 (42%)
Query: 1248 QIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH--------LTILIENMRREGYEL 1299
+++N +I +GL+ TQ D++ V R EL ++ I N + YE
Sbjct: 564 ELENAKAGDIVGLVGLKDTQI--GDTLSNVFLRAELKRIKDIPPIISYYIYNKNKNEYEK 621
Query: 1300 SVSRPRVIFKTLNGELY---EPYENLFVD-IEEINQGIIMQKLNYRGGDLKNIEINEKER 1355
++ I K + Y + ++L + + E++ II+ K+ D NI I +
Sbjct: 622 LINALIKIKKEDHSFFYHINQDTKDLLISGVGELHLQIIINKIEK---DF-NIPIIYG-K 676
Query: 1356 VRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
++ Y+ + + ++I + G G V E P YN ++ +
Sbjct: 677 PQISYKETFVESVKARGKYIKQSGGRGQYGDVHIEIEPMYNYNEQE 722
Score = 42 (19.8 bits), Expect = 5.6e-09, Sum P(5) = 5.6e-09
Identities = 17/83 (20%), Positives = 39/83 (46%)
Query: 454 KEIKSEITNL-IPLEKKENLLGLAEIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNK 512
+++ +I L +P+ + + +I + ++ V K A +I E + + + L+ K
Sbjct: 251 RKLNKKILILYVPVFEMSKFISTIDILKEKMI--VYKNAHDFIFEDIPKEHYNL-FLKYK 307
Query: 513 NIIWTGELDSLKRFKDNVKEVKA 535
N+++ ++ F DN KA
Sbjct: 308 NLLFEQIAENFNSFLDNYLNDKA 330
Score = 39 (18.8 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 1093 SKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQII 1127
S + N+ L + ++KY+P D+ N + QII
Sbjct: 356 SALKNKNVQMLLDMVVKYLPSPIDSIKN-YKKQII 389
Score = 39 (18.8 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 648 KYCMQFHIKKNKNIIHGVLLLDKPYGLSSNNALKKIK 684
+Y IK +KNII + L G + N L+ +
Sbjct: 66 RYVRNDIIKPHKNIIKNIFRLKLVNGSTKNVELENYR 102
Score = 38 (18.4 bits), Expect = 2.0e-19, Sum P(5) = 2.0e-19
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 1079 VIYTSALHGYANENSKARQGNMIP-----LFEAILKYVPVHKDNSNNPLQLQIISLEYSS 1133
++Y +A H + E+ N+ LFE I + DN N + I +EY
Sbjct: 282 IVYKNA-HDFIFEDIPKEHYNLFLKYKNLLFEQIAENFNSFLDNYLNDKAMNIQEIEY-- 338
Query: 1134 YLGKI 1138
Y+ K+
Sbjct: 339 YIRKL 343
>UNIPROTKB|C6KSM4 [details] [associations]
symbol:PFF0115c "Elongation factor G, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=IDA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 EMBL:AL844505 InterPro:IPR009000 SUPFAM:SSF50447
GO:GO:0020011 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
KO:K02355 OMA:GEICAFV HOGENOM:HOG000231587 RefSeq:XP_966014.1
ProteinModelPortal:C6KSM4 EnsemblProtists:PFF0115c:mRNA
GeneID:3885741 KEGG:pfa:PFF0115c EuPathDB:PlasmoDB:PF3D7_0602400
ProtClustDB:CLSZ2433470 Uniprot:C6KSM4
Length = 937
Score = 218 (81.8 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 51/142 (35%), Positives = 83/142 (58%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARI--MDSNEIEKERGITIFSKNCSIEYNG 984
IIAH+D GKTT + +L + +K ++ + MD +IE+E+GITI + + +NG
Sbjct: 106 IIAHIDAGKTTTTERILYYTNVIKKIGEVHEGLSTMDYLDIEREKGITINAAVTTCYWNG 165
Query: 985 T-------RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLG 1037
+ RINIIDTPGH DF EVE+ L ++D +++ D+ EG Q+ V ++A +
Sbjct: 166 SEKNLEDYRINIIDTPGHVDFTAEVEKSLRVLDGGVVVFDSSEGVESQSETVWKQANQYN 225
Query: 1038 FKPIVVVNKIDRSNARPEWVVD 1059
I+ +NK+D+ A E ++
Sbjct: 226 ISRIIFLNKLDKVGANFEGCIE 247
Score = 114 (45.2 bits), Expect = 5.6e-09, Sum P(5) = 5.6e-09
Identities = 34/131 (25%), Positives = 62/131 (47%)
Query: 59 KNITAESLVR-APIVTIMGHVDHGKTSL--LDYIRKTNVVFSEAGGITQHIGAYNVVTNH 115
K T E ++ ++ +G V G +++ LD R+ + + A G+ + ++
Sbjct: 114 KTTTTERILYYTNVIKKIGEVHEGLSTMDYLDIEREKGITINAAVTTCYWNGSEKNLEDY 173
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAI 175
I +DTPGH FTA + +V D V+V + +GV Q+ A + I+ +
Sbjct: 174 -RINIIDTPGHVDFTAEVEKSLRVLDGGVVVFDSSEGVESQSETVWKQANQYNISRIIFL 232
Query: 176 NKIDKLDINLD 186
NK+DK+ N +
Sbjct: 233 NKLDKVGANFE 243
Score = 104 (41.7 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 47/185 (25%), Positives = 81/185 (43%)
Query: 1126 IISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNE 1185
I + +LG I RI G+I + I N K K I++I ++ +
Sbjct: 512 IYKIMNDQHLGNINYVRIYEGQIN--RGEFIYNNRTKKSEK--ISKIFFIHSSEKYELEN 567
Query: 1186 ALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFIT 1245
A +GDIV + G+++ IG T+ + L + D P + I++ + N E
Sbjct: 568 AKAGDIVGLVGLKDTQIGDTLSNVFLRAELKRIK-DIPPI-ISYYIYNKNKNEYEKLINA 625
Query: 1246 TRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYELSVSRP 1304
+IK DH +I Q+ D +SG GELHL I+I + ++ + +P
Sbjct: 626 LIKIKKE-DHSFFYHIN----QDTKD---LLISGVGELHLQIIINKIEKDFNIPIIYGKP 677
Query: 1305 RVIFK 1309
++ +K
Sbjct: 678 QISYK 682
Score = 66 (28.3 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 16/78 (20%), Positives = 38/78 (48%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
L EP NL V + G ++ L + G +++I+ +++ + R P ++ + ++
Sbjct: 845 LLEPIMNLNVTVPTEYLGDVISDLVKKRGKIQHIDESDEFTKEITARAPMASVLSYVSDL 904
Query: 1375 ITLTRGTGLISHVFEEYA 1392
+T+G G + +Y+
Sbjct: 905 RKITKGRGNYTMTLHKYS 922
Score = 44 (20.5 bits), Expect = 3.8e-11, Sum P(4) = 3.8e-11
Identities = 36/166 (21%), Positives = 71/166 (42%)
Query: 1248 QIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELH--------LTILIENMRREGYEL 1299
+++N +I +GL+ TQ D++ V R EL ++ I N + YE
Sbjct: 564 ELENAKAGDIVGLVGLKDTQI--GDTLSNVFLRAELKRIKDIPPIISYYIYNKNKNEYEK 621
Query: 1300 SVSRPRVIFKTLNGELY---EPYENLFVD-IEEINQGIIMQKLNYRGGDLKNIEINEKER 1355
++ I K + Y + ++L + + E++ II+ K+ D NI I +
Sbjct: 622 LINALIKIKKEDHSFFYHINQDTKDLLISGVGELHLQIIINKIEK---DF-NIPIIYG-K 676
Query: 1356 VRLEYRIPSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYD 1401
++ Y+ + + ++I + G G V E P YN ++ +
Sbjct: 677 PQISYKETFVESVKARGKYIKQSGGRGQYGDVHIEIEPMYNYNEQE 722
Score = 42 (19.8 bits), Expect = 5.6e-09, Sum P(5) = 5.6e-09
Identities = 17/83 (20%), Positives = 39/83 (46%)
Query: 454 KEIKSEITNL-IPLEKKENLLGLAEIRQVILVNKVSKIAGCYILEGLIRRDSKIRILRNK 512
+++ +I L +P+ + + +I + ++ V K A +I E + + + L+ K
Sbjct: 251 RKLNKKILILYVPVFEMSKFISTIDILKEKMI--VYKNAHDFIFEDIPKEHYNL-FLKYK 307
Query: 513 NIIWTGELDSLKRFKDNVKEVKA 535
N+++ ++ F DN KA
Sbjct: 308 NLLFEQIAENFNSFLDNYLNDKA 330
Score = 39 (18.8 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 1093 SKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQII 1127
S + N+ L + ++KY+P D+ N + QII
Sbjct: 356 SALKNKNVQMLLDMVVKYLPSPIDSIKN-YKKQII 389
Score = 39 (18.8 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 648 KYCMQFHIKKNKNIIHGVLLLDKPYGLSSNNALKKIK 684
+Y IK +KNII + L G + N L+ +
Sbjct: 66 RYVRNDIIKPHKNIIKNIFRLKLVNGSTKNVELENYR 102
Score = 38 (18.4 bits), Expect = 2.0e-19, Sum P(5) = 2.0e-19
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 1079 VIYTSALHGYANENSKARQGNMIP-----LFEAILKYVPVHKDNSNNPLQLQIISLEYSS 1133
++Y +A H + E+ N+ LFE I + DN N + I +EY
Sbjct: 282 IVYKNA-HDFIFEDIPKEHYNLFLKYKNLLFEQIAENFNSFLDNYLNDKAMNIQEIEY-- 338
Query: 1134 YLGKI 1138
Y+ K+
Sbjct: 339 YIRKL 343
>UNIPROTKB|Q71ZJ1 [details] [associations]
symbol:lepA "Elongation factor 4" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00071 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006297
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0006412 GO:GO:0003924 GO:GO:0006184
EMBL:AE017262 GenomeReviews:AE017262_GR Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0481 HOGENOM:HOG000020624
InterPro:IPR013842 PANTHER:PTHR23115:SF40 Pfam:PF06421
TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596 ProtClustDB:PRK05433
RefSeq:YP_014096.1 ProteinModelPortal:Q71ZJ1 SMR:Q71ZJ1
STRING:Q71ZJ1 GeneID:2797755 KEGG:lmf:LMOf2365_1498 PATRIC:20324235
Uniprot:Q71ZJ1
Length = 608
Score = 236 (88.1 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 57/144 (39%), Positives = 84/144 (58%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG- 984
+IIAH+DHGK+TL D +L Q+G + N +++DS ++E+ERGITI ++Y
Sbjct: 17 SIIAHIDHGKSTLADRILEQTGALTHREMKN-QLLDSMDLERERGITIKLNAVQLKYKAK 75
Query: 985 ---TRI-NIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
T I ++IDTPGH DF EV R L+ + +L++DA +G QT AL +
Sbjct: 76 DGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEI 135
Query: 1041 IVVVNKIDRSNARPEWVVDATFDL 1064
+ V+NKID A PE V + D+
Sbjct: 136 LPVINKIDLPAADPERVREEIEDV 159
Score = 177 (67.4 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 55/183 (30%), Positives = 88/183 (48%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH FT +R + +LVV A G+ QT + A + + ++ INKID
Sbjct: 85 IDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDL 144
Query: 181 LDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAPVT 240
+ +R+++++ E VI + AS + SAK+G+GI +LE I ++ E V
Sbjct: 145 PAADPERVREEI--EDVIGLD---ASDAVLASAKSGIGIEDILEQIV--EKVPEPSGDVN 197
Query: 241 TPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNENGKNILEAGP 300
P K +I +S D +G +A + I G ++ D RI+ M N + E G
Sbjct: 198 KPLKALIFDSVFDAYRGVIANIRIMDGVVKAGD---------RIKMMSNGKEFEVTEVGV 248
Query: 301 SIP 303
P
Sbjct: 249 FSP 251
Score = 86 (35.3 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 70/321 (21%), Positives = 131/321 (40%)
Query: 1093 SKARQGNMIP-LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSL 1151
+ A+ G I + E I++ VP + N PL+ I + +Y G I RI+ G +K+
Sbjct: 170 ASAKSGIGIEDILEQIVEKVPEPSGDVNKPLKALIFDSVFDAYRGVIANIRIMDGVVKAG 229
Query: 1152 QDVVIM-NGPDDKPNKAKINQIRVF--KGLDRVLVNEALSGDIVLITG----IEEICIGS 1204
+ +M NG + ++ ++ VF K R +E L GD+ +T + + +G
Sbjct: 230 DRIKMMSNGKE-----FEVTEVGVFSPKATPR---DELLVGDVGYLTAAIKNVGDTRVGD 281
Query: 1205 TICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLR 1264
TI + P + + +N MV K+ R +L+ N+ L+
Sbjct: 282 TITLANNPAEEAL----DGYRKLNPMVYCGLYPIDSSKYNDLRDALEKLE---LNDSALQ 334
Query: 1265 VTQNKHDDSI---YEVSGRGELHLTILIENMRRE-GYELSVSRPRVIFKT--LNGE---- 1314
+ + ++ + G LH+ I+ E + RE +L + P VI+ +G
Sbjct: 335 F-EAETSQALGFGFRCGFLGLLHMEIIQERIEREFNIDLITTAPSVIYHVNLTDGSNIVV 393
Query: 1315 --------------LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEY 1360
+ EPY V + G +M+ + G+ +E + RV + Y
Sbjct: 394 DNPAEMPEPGVIESVEEPYVKATVMVPNDYVGAVMELAQNKRGNFITMEYLDDIRVSIVY 453
Query: 1361 RIPSRGLI-GFQNEFITLTRG 1380
IP ++ F ++ + T+G
Sbjct: 454 EIPLSEIVYDFFDQLKSSTKG 474
>WB|WBGene00009246 [details] [associations]
symbol:F29C12.4 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0003746 "translation elongation factor
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
UniPathway:UPA00345 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003924
GO:GO:0000003 GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
TIGRFAMs:TIGR00484 OMA:QEPGKGY GO:GO:0070125 EMBL:Z81519 PIR:T21534
RefSeq:NP_496787.1 ProteinModelPortal:Q9XV52 SMR:Q9XV52
DIP:DIP-26845N MINT:MINT-1104667 STRING:Q9XV52 PaxDb:Q9XV52
EnsemblMetazoa:F29C12.4.1 EnsemblMetazoa:F29C12.4.2 GeneID:174956
KEGG:cel:CELE_F29C12.4 UCSC:F29C12.4 CTD:174956 WormBase:F29C12.4
GeneTree:ENSGT00550000074911 InParanoid:Q9XV52 NextBio:886180
Uniprot:Q9XV52
Length = 750
Score = 242 (90.2 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 60/166 (36%), Positives = 89/166 (53%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTT+ + +L +G + + MD ++E++RGITI S ++
Sbjct: 49 ISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGITIQSAATYVD 108
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
++GT INIIDTPGH DF EVER L ++D +L++ V G QT V R+ + I
Sbjct: 109 WHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNRQLARYNVPFI 168
Query: 1042 VVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
VNK+DR+ A P +D L +KL + P+ S +G
Sbjct: 169 CFVNKMDRNGATPLKALDG---LRNKLNHNAALIHLPIGKDSNFNG 211
Score = 108 (43.1 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 32/82 (39%), Positives = 39/82 (47%)
Query: 101 GIT-QHIGAYNVVTNHGS-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTR 158
GIT Q Y V HG+ I +DTPGH FT R +V D VLV+ GV QT
Sbjct: 97 GITIQSAATY--VDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTF 154
Query: 159 EAIAHAKISGVPLIVAINKIDK 180
VP I +NK+D+
Sbjct: 155 TVNRQLARYNVPFICFVNKMDR 176
Score = 89 (36.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 51/206 (24%), Positives = 87/206 (42%)
Query: 1115 KDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRV 1174
K N++ P LE Y G++ R+ G++ S D V + D + K ++ ++
Sbjct: 343 KRNNDKPFVGLAFKLEAGKY-GQLTYFRVYQGQL-SKGDTVYASR-DGR--KVRVQRLVR 397
Query: 1175 FKGLDRVLVNEALSGDIVLITGIEEIC-IGSTIC-DPSKPNGLPMLNIDEPTLTINFMVN 1232
D + A +GDI G++ C G T D + ++I EP +++
Sbjct: 398 MHAADMEEITTAYAGDICATFGLD--CHSGETFSTDQNLAPHCESMHIPEPVISMAIKPV 455
Query: 1233 NSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENM 1292
N A K +T R K D + R + ++I VSG GELHL I + M
Sbjct: 456 NRKDADNFIKALT-RFTKE--DPTFR-----REYNQEAKETI--VSGMGELHLEIYAQRM 505
Query: 1293 RRE-GYELSVSRPRVIFKTLNGELYE 1317
+ E + + +P V ++ G Y+
Sbjct: 506 KSEYNCPVELGKPTVAYRECLGSPYK 531
Score = 71 (30.1 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 34/138 (24%), Positives = 55/138 (39%)
Query: 1257 IKNNI-GLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGEL 1315
IK+ I G+ V D S + V E+ + ++NM RE +E + N L
Sbjct: 597 IKSRIAGIHV--RIQDGSTHAVDST-EIAMINTMQNMMRESFEKA-----------NWLL 642
Query: 1316 YEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFI 1375
EP + + QG ++ L R + + E + P + G+ +E
Sbjct: 643 LEPIMKVEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVI-CEAPLSDMFGYTSELR 701
Query: 1376 TLTRGTGLISHVFEEYAP 1393
+LT G G S + YAP
Sbjct: 702 SLTEGKGEFSMEYSRYAP 719
Score = 41 (19.5 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT++ + I
Sbjct: 47 IGISAHIDSGKTTVTERI 64
>UNIPROTKB|Q9XV52 [details] [associations]
symbol:F29C12.4 "Elongation factor G, mitochondrial"
species:6239 "Caenorhabditis elegans" [GO:0006184 "GTP catabolic
process" evidence=ISS] [GO:0070125 "mitochondrial translational
elongation" evidence=ISS] [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0003746 "translation elongation factor activity"
evidence=ISS] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR004540 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003924 GO:GO:0000003
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
TIGRFAMs:TIGR00484 OMA:QEPGKGY GO:GO:0070125 EMBL:Z81519 PIR:T21534
RefSeq:NP_496787.1 ProteinModelPortal:Q9XV52 SMR:Q9XV52
DIP:DIP-26845N MINT:MINT-1104667 STRING:Q9XV52 PaxDb:Q9XV52
EnsemblMetazoa:F29C12.4.1 EnsemblMetazoa:F29C12.4.2 GeneID:174956
KEGG:cel:CELE_F29C12.4 UCSC:F29C12.4 CTD:174956 WormBase:F29C12.4
GeneTree:ENSGT00550000074911 InParanoid:Q9XV52 NextBio:886180
Uniprot:Q9XV52
Length = 750
Score = 242 (90.2 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 60/166 (36%), Positives = 89/166 (53%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTT+ + +L +G + + MD ++E++RGITI S ++
Sbjct: 49 ISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGITIQSAATYVD 108
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
++GT INIIDTPGH DF EVER L ++D +L++ V G QT V R+ + I
Sbjct: 109 WHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNRQLARYNVPFI 168
Query: 1042 VVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHG 1087
VNK+DR+ A P +D L +KL + P+ S +G
Sbjct: 169 CFVNKMDRNGATPLKALDG---LRNKLNHNAALIHLPIGKDSNFNG 211
Score = 108 (43.1 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 32/82 (39%), Positives = 39/82 (47%)
Query: 101 GIT-QHIGAYNVVTNHGS-ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTR 158
GIT Q Y V HG+ I +DTPGH FT R +V D VLV+ GV QT
Sbjct: 97 GITIQSAATY--VDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTF 154
Query: 159 EAIAHAKISGVPLIVAINKIDK 180
VP I +NK+D+
Sbjct: 155 TVNRQLARYNVPFICFVNKMDR 176
Score = 89 (36.4 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 51/206 (24%), Positives = 87/206 (42%)
Query: 1115 KDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRV 1174
K N++ P LE Y G++ R+ G++ S D V + D + K ++ ++
Sbjct: 343 KRNNDKPFVGLAFKLEAGKY-GQLTYFRVYQGQL-SKGDTVYASR-DGR--KVRVQRLVR 397
Query: 1175 FKGLDRVLVNEALSGDIVLITGIEEIC-IGSTIC-DPSKPNGLPMLNIDEPTLTINFMVN 1232
D + A +GDI G++ C G T D + ++I EP +++
Sbjct: 398 MHAADMEEITTAYAGDICATFGLD--CHSGETFSTDQNLAPHCESMHIPEPVISMAIKPV 455
Query: 1233 NSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENM 1292
N A K +T R K D + R + ++I VSG GELHL I + M
Sbjct: 456 NRKDADNFIKALT-RFTKE--DPTFR-----REYNQEAKETI--VSGMGELHLEIYAQRM 505
Query: 1293 RRE-GYELSVSRPRVIFKTLNGELYE 1317
+ E + + +P V ++ G Y+
Sbjct: 506 KSEYNCPVELGKPTVAYRECLGSPYK 531
Score = 71 (30.1 bits), Expect = 1.3e-17, Sum P(3) = 1.3e-17
Identities = 34/138 (24%), Positives = 55/138 (39%)
Query: 1257 IKNNI-GLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSVSRPRVIFKTLNGEL 1315
IK+ I G+ V D S + V E+ + ++NM RE +E + N L
Sbjct: 597 IKSRIAGIHV--RIQDGSTHAVDST-EIAMINTMQNMMRESFEKA-----------NWLL 642
Query: 1316 YEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEFI 1375
EP + + QG ++ L R + + E + P + G+ +E
Sbjct: 643 LEPIMKVEATVPTEFQGNVVTSLTQRNALITTTDSTEGYATVI-CEAPLSDMFGYTSELR 701
Query: 1376 TLTRGTGLISHVFEEYAP 1393
+LT G G S + YAP
Sbjct: 702 SLTEGKGEFSMEYSRYAP 719
Score = 41 (19.5 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT++ + I
Sbjct: 47 IGISAHIDSGKTTVTERI 64
>TAIR|locus:2205235 [details] [associations]
symbol:LOS1 "AT1G56070" species:3702 "Arabidopsis
thaliana" [GO:0003746 "translation elongation factor activity"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISS] [GO:0009409 "response to cold"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005507
"copper ion binding" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005774 GO:GO:0009507
GO:GO:0005730 GO:GO:0048046 GO:GO:0009409 GO:GO:0003924
GO:GO:0006184 GO:GO:0005507 GO:GO:0003746 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 KO:K03234
OMA:NRHNRFY HSSP:P32324 EMBL:AF367331 EMBL:AY054461 EMBL:BT000661
EMBL:BT000722 EMBL:BT002714 IPI:IPI00517335 RefSeq:NP_849818.1
UniGene:At.47544 ProteinModelPortal:Q9ASR1 SMR:Q9ASR1 STRING:Q9ASR1
PRIDE:Q9ASR1 ProMEX:Q9ASR1 EnsemblPlants:AT1G56070.1 GeneID:842058
KEGG:ath:AT1G56070 TAIR:At1g56070 InParanoid:Q9ASR1
PhylomeDB:Q9ASR1 ProtClustDB:PLN00116 Genevestigator:Q9ASR1
Uniprot:Q9ASR1
Length = 843
Score = 235 (87.8 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 56/140 (40%), Positives = 78/140 (55%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
++IAHVDHGK+TL D L+ +G + + R+ D+ E ERGITI S S+ Y
Sbjct: 23 SVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMT 82
Query: 984 --------GTR------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFV 1029
G R IN+ID+PGH DF EV L + D L+++D +EG QT V
Sbjct: 83 DESLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETV 142
Query: 1030 TRKALKLGFKPIVVVNKIDR 1049
R+AL +P++ VNK+DR
Sbjct: 143 LRQALGERIRPVLTVNKMDR 162
Score = 93 (37.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 21/75 (28%), Positives = 40/75 (53%)
Query: 114 NHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
N I +D+PGH F++ ++TD ++VV +GV QT + A + ++
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVL 155
Query: 174 AINKIDK--LDINLD 186
+NK+D+ L++ +D
Sbjct: 156 TVNKMDRCFLELQVD 170
Score = 90 (36.7 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 46/202 (22%), Positives = 94/202 (46%)
Query: 1119 NNPLQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMNGPDDKPNKAK------INQ 1171
N PL L + + +S G+ GR+ +G++ + V IM GP+ P + K + +
Sbjct: 373 NGPLMLYVSKMIPASDKGRFFAFGRVFAGKVSTGMKVRIM-GPNYIPGEKKDLYTKSVQR 431
Query: 1172 IRVFKGLDRVLVNEALSGDIVLITGIEE-ICIGSTICDPSKPNGLPMLNIDEPTLTINFM 1230
++ G + V + G+ V + G+++ I +T+ + + + P+ + + +
Sbjct: 432 TVIWMGKRQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRV 491
Query: 1231 VNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIE 1290
+A K + +K RL K++ + T + + I V+G GELHL I ++
Sbjct: 492 AVQCKVASDLPKLV--EGLK-RL---AKSDPMVVCTMEESGEHI--VAGAGELHLEICLK 543
Query: 1291 NMRRE---GYELSVSRPRVIFK 1309
+++ + G E+ S P V F+
Sbjct: 544 DLQDDFMGGAEIIKSDPVVSFR 565
>TIGR_CMR|CHY_2327 [details] [associations]
symbol:CHY_2327 "translation elongation factor Tu"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004160 InterPro:IPR004161
InterPro:IPR004541 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03143
Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
InterPro:IPR009001 InterPro:IPR009000 SUPFAM:SSF50465
SUPFAM:SSF50447 eggNOG:COG0050 HOGENOM:HOG000229290 KO:K02358
OMA:SSYSISH TIGRFAMs:TIGR00485 HSSP:P0A6N1 HAMAP:MF_00118_B
ProtClustDB:PRK12735 RefSeq:YP_361136.1 ProteinModelPortal:Q3A9P8
SMR:Q3A9P8 STRING:Q3A9P8 PRIDE:Q3A9P8 GeneID:3728307
KEGG:chy:CHY_2327 PATRIC:21277721
BioCyc:CHYD246194:GJCN-2326-MONOMER Uniprot:Q3A9P8
Length = 400
Score = 260 (96.6 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 91/301 (30%), Positives = 151/301 (50%)
Query: 928 IAHVDHGKTTL---IDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
I HVDHGKTTL I +L + G ++ + +D+ E+ERGITI + + E
Sbjct: 18 IGHVDHGKTTLTAAITTVLAKKGLAQQKRYDE---IDNAPEERERGITINTAHVEYETEK 74
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV- 1043
+D PGHAD+ + + +D +L++ A +GPMPQTR A ++G IVV
Sbjct: 75 RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVF 134
Query: 1044 VNKIDRSNARPEWVVDATFDLFDKLCATEEQLD-FPVIYTSALH----GYANENSKARQG 1098
+NK D + PE + ++ D L E D PV+ SAL G E+ G
Sbjct: 135 LNKADMVDD-PELMELVEMEVRDLLSTYEFPGDEVPVVAGSALKALECGCGKEDCPWC-G 192
Query: 1099 NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMN 1158
++ L + + +Y+P + + + P + + + + G + GR+ GRI ++V I+
Sbjct: 193 KILELMDKVDEYIPTPQRDVDKPFLMPVEDVFTITGRGTVATGRVERGRITIGEEVEIV- 251
Query: 1159 GPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIV--LITGIE--EICIGSTICDPS--KP 1212
G D P K + + +F+ +VL +EA++GD + L+ G++ EI G + P KP
Sbjct: 252 GLMDAPRKTVVTGLEMFR---KVL-DEAVAGDNIGALLRGVDRKEIERGQVLAKPGTIKP 307
Query: 1213 N 1213
+
Sbjct: 308 H 308
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 72/234 (30%), Positives = 100/234 (42%)
Query: 75 MGHVDHGKTSLLDYI-----RK-----------TNVVFSEAGGITQHIGAYNVVTNHGSI 118
+GHVDHGKT+L I +K N GIT + T
Sbjct: 18 IGHVDHGKTTLTAAITTVLAKKGLAQQKRYDEIDNAPEERERGITINTAHVEYETEKRHY 77
Query: 119 TFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA-INK 177
+D PGH + GA D +LVV+A DG MPQTRE I A+ GVP IV +NK
Sbjct: 78 AHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNK 137
Query: 178 IDKLD----INLDRIK-QDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEI 232
D +D + L ++ +DL+S P G P ++ SA + E+ +I
Sbjct: 138 ADMVDDPELMELVEMEVRDLLSTYEFP---GDEVPVVAGSALKALECGCGKEDCPWCGKI 194
Query: 233 LELKAPVT----TPAKGVI------IESRLD-KGKGPVATVLIQSGTLRCSDIV 275
LEL V TP + V +E G+G VAT ++ G + + V
Sbjct: 195 LELMDKVDEYIPTPQRDVDKPFLMPVEDVFTITGRGTVATGRVERGRITIGEEV 248
>TAIR|locus:2829525 [details] [associations]
symbol:AT3G12915 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002686
GO:GO:0003924 GO:GO:0006184 GO:GO:0005840 GO:GO:0003746
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
KO:K03234 IPI:IPI00938927 RefSeq:NP_001154611.1 UniGene:At.74672
ProteinModelPortal:F4JB05 SMR:F4JB05 PRIDE:F4JB05
EnsemblPlants:AT3G12915.1 GeneID:3768815 KEGG:ath:AT3G12915
OMA:QMISTAR Uniprot:F4JB05
Length = 820
Score = 233 (87.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 55/140 (39%), Positives = 78/140 (55%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
++IAHVDHGK+TL D L+ +G + + R+ D+ E ERGITI S S+ Y
Sbjct: 2 SVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRMTDTRADEAERGITIKSTGISLYYEMT 61
Query: 984 --------GTR------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFV 1029
G R IN+ID+PGH DF EV L + D L+++D +EG QT V
Sbjct: 62 DASLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETV 121
Query: 1030 TRKALKLGFKPIVVVNKIDR 1049
R++L +P++ VNK+DR
Sbjct: 122 LRQSLGERIRPVLTVNKMDR 141
Score = 90 (36.7 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 50/217 (23%), Positives = 99/217 (45%)
Query: 1103 LFEAIL--KYVPVHKD-NSNNPLQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMN 1158
L+E L KY ++ + + PL L + + +S G+ GR+ SG + + V IM
Sbjct: 332 LYEGPLDDKYAAAIRNCDPDGPLMLYVSKMIPASDKGRFFAFGRVFSGTVSTGMKVRIM- 390
Query: 1159 GPDDKPNKAK------INQIRVFKGLDRVLVNEALSGDIVLITGIEE-ICIGSTICDPSK 1211
GP+ P + K + + ++ G + V + G+ V + G+++ I T+ + +
Sbjct: 391 GPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNGTLTNEKE 450
Query: 1212 PNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHD 1271
+ P+ + + + LA K + +K RL K++ + T +
Sbjct: 451 VDAHPLRAMKFSVSPVVRVAVKCKLASDLPKLV--EGLK-RL---AKSDPMVLCTMEESG 504
Query: 1272 DSIYEVSGRGELHLTILIENMR--REGYELSVSRPRV 1306
+ I V+G GELH+ I +++++ G ++ VS P V
Sbjct: 505 EHI--VAGAGELHIEICVKDLQDFMGGADIIVSDPVV 539
Score = 90 (36.7 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 114 NHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIV 173
N I +D+PGH F++ ++TD ++VV +GV QT + + + ++
Sbjct: 75 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQSLGERIRPVL 134
Query: 174 AINKIDK--LDINLD 186
+NK+D+ L++ +D
Sbjct: 135 TVNKMDRCFLELKVD 149
Score = 60 (26.2 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGG 101
++++ HVDHGK++L D + ++ E G
Sbjct: 1 MSVIAHVDHGKSTLTDSLVAAAGIIAQETAG 31
>TIGR_CMR|CHY_2312 [details] [associations]
symbol:CHY_2312 "translation elongation factor Tu"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR004160 InterPro:IPR004161
InterPro:IPR004541 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03143
Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
InterPro:IPR009001 InterPro:IPR009000 SUPFAM:SSF50465
SUPFAM:SSF50447 eggNOG:COG0050 HOGENOM:HOG000229290 KO:K02358
TIGRFAMs:TIGR00485 RefSeq:YP_361121.1 HSSP:P0A6N1
ProteinModelPortal:Q3A9R3 SMR:Q3A9R3 STRING:Q3A9R3 PRIDE:Q3A9R3
GeneID:3728290 KEGG:chy:CHY_2312 PATRIC:21277693
ProtClustDB:PRK00049 BioCyc:CHYD246194:GJCN-2311-MONOMER
HAMAP:MF_00118_B Uniprot:Q3A9R3
Length = 400
Score = 259 (96.2 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 91/301 (30%), Positives = 151/301 (50%)
Query: 928 IAHVDHGKTTL---IDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNG 984
I HVDHGKTTL I +L + G ++ + +D+ E+ERGITI + + E
Sbjct: 18 IGHVDHGKTTLTAAITTVLAKRGLAQQKRYDE---IDNAPEERERGITINTAHVEYETEK 74
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV- 1043
+D PGHAD+ + + +D +L++ A +GPMPQTR A ++G IVV
Sbjct: 75 RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVF 134
Query: 1044 VNKIDRSNARPEWVVDATFDLFDKLCATEEQLD-FPVIYTSALH----GYANENSKARQG 1098
+NK D + PE + ++ D L E D PV+ SAL G E+ G
Sbjct: 135 LNKADMVDD-PELMELVEMEVRDLLSTYEFPGDEVPVVAGSALKALECGCGKEDCPWC-G 192
Query: 1099 NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMN 1158
++ L + + +Y+P + + + P + + + + G + GR+ GRI ++V I+
Sbjct: 193 KILELMDKVDEYIPTPQRDVDKPFLMPVEDVFTITGRGTVATGRVERGRITIGEEVEIV- 251
Query: 1159 GPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIV--LITGIE--EICIGSTICDPS--KP 1212
G D P K + + +F+ +VL +EA++GD + L+ G++ EI G + P KP
Sbjct: 252 GLMDAPRKTVVTGLEMFR---KVL-DEAVAGDNIGALLRGVDRKEIERGQVLAKPGTIKP 307
Query: 1213 N 1213
+
Sbjct: 308 H 308
Score = 153 (58.9 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 71/234 (30%), Positives = 98/234 (41%)
Query: 75 MGHVDHGKTSLLDYIRKT----------------NVVFSEAGGITQHIGAYNVVTNHGSI 118
+GHVDHGKT+L I N GIT + T
Sbjct: 18 IGHVDHGKTTLTAAITTVLAKRGLAQQKRYDEIDNAPEERERGITINTAHVEYETEKRHY 77
Query: 119 TFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA-INK 177
+D PGH + GA D +LVV+A DG MPQTRE I A+ GVP IV +NK
Sbjct: 78 AHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNK 137
Query: 178 IDKLD----INLDRIK-QDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEI 232
D +D + L ++ +DL+S P G P ++ SA + E+ +I
Sbjct: 138 ADMVDDPELMELVEMEVRDLLSTYEFP---GDEVPVVAGSALKALECGCGKEDCPWCGKI 194
Query: 233 LELKAPVT----TPAKGVI------IESRLD-KGKGPVATVLIQSGTLRCSDIV 275
LEL V TP + V +E G+G VAT ++ G + + V
Sbjct: 195 LELMDKVDEYIPTPQRDVDKPFLMPVEDVFTITGRGTVATGRVERGRITIGEEV 248
>RGD|1306521 [details] [associations]
symbol:Eftud1 "elongation factor Tu GTP binding domain
containing 1" species:10116 "Rattus norvegicus" [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0042256
"mature ribosome assembly" evidence=ISO] [GO:0043022 "ribosome
binding" evidence=ISO] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
RGD:1306521 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924
GO:GO:0043022 GO:GO:0042256 InterPro:IPR009000 SUPFAM:SSF50447
GeneTree:ENSGT00550000074806 OrthoDB:EOG4JHCF0 IPI:IPI00368186
Ensembl:ENSRNOT00000047408 UCSC:RGD:1306521 Uniprot:D3ZXJ5
Length = 629
Score = 266 (98.7 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 56/127 (44%), Positives = 78/127 (61%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY-NGT 985
++AHVDHGKTTL D L+ +G R MDS E E+ RGIT+ S S+ Y G+
Sbjct: 24 VLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSREDEQVRGITMKSSAISLHYAEGS 83
Query: 986 R---INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
IN+ID+PGH DF EV + + D ++++DAVEG PQT+ V +A +P++
Sbjct: 84 EEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLXQAXLENIRPVL 143
Query: 1043 VVNKIDR 1049
V+NKIDR
Sbjct: 144 VINKIDR 150
Score = 130 (50.8 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 101 GITQHIGAYNVVTNHGS----ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQ 156
GIT A ++ GS I +D+PGH F++ + ++ D ++VV A +GV PQ
Sbjct: 67 GITMKSSAISLHYAEGSEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQ 126
Query: 157 TREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLIS 194
T+ + A + + ++ INKID+L + L Q+ S
Sbjct: 127 TQAVLXQAXLENIRPVLVINKIDRLIVELKFTPQEAYS 164
Score = 67 (28.6 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS 97
+ ++ HVDHGKT+L D + +N + S
Sbjct: 22 ICVLAHVDHGKTTLADCLISSNGIIS 47
Score = 42 (19.8 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 280 SYGRIRSMLNENGKNILEAGPSI-PVEIQGLTKVP 313
++ R+ S + GK I GP PV+ L +VP
Sbjct: 507 AFARVFSGVARRGKKIFVLGPKYSPVDF--LQRVP 539
>GENEDB_PFALCIPARUM|PF14_0486 [details] [associations]
symbol:PF14_0486 "elongation factor 2"
species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
GO:GO:0003746 EMBL:AE014187 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HOGENOM:HOG000231589 KO:K03234 ProtClustDB:PTZ00416
OMA:YVKAQPI HSSP:P32324 RefSeq:XP_001348660.1
ProteinModelPortal:Q8IKW5 SMR:Q8IKW5 IntAct:Q8IKW5
MINT:MINT-1659271 PRIDE:Q8IKW5 EnsemblProtists:PF14_0486:mRNA
GeneID:812068 KEGG:pfa:PF14_0486 EuPathDB:PlasmoDB:PF3D7_1451100
Uniprot:Q8IKW5
Length = 832
Score = 247 (92.0 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 62/173 (35%), Positives = 94/173 (54%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
++IAHVDHGK+TL D L+ ++G +AR D+ + E+ER ITI S S+ +
Sbjct: 23 SVIAHVDHGKSTLTDSLVSKAGIISSKNAGDARFTDTRQDEQERCITIKSTGISMYFEHD 82
Query: 984 -----GTR---INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALK 1035
G + IN+ID+PGH DF EV L + D L+++D +EG QT V +AL
Sbjct: 83 LEDGEGKKPFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLYQALG 142
Query: 1036 LGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV-IYTSALHG 1087
KP++ VNK+DR+ + V+ D++ T E ++ + YT L G
Sbjct: 143 ERIKPVLHVNKVDRALLELQMEVE---DIYQTFARTIESVNVIISTYTDKLMG 192
Score = 94 (38.1 bits), Expect = 3.0e-05, Sum P(5) = 3.0e-05
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ +VTD ++VV +GV QT + A + ++ +NK
Sbjct: 94 INLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLYQALGERIKPVLHVNK 153
Query: 178 IDKLDINLDRIKQDL 192
+D+ + L +D+
Sbjct: 154 VDRALLELQMEVEDI 168
Score = 75 (31.5 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 44/200 (22%), Positives = 94/200 (47%)
Query: 1119 NNPLQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMNG---PDDKPNKAKINQIRV 1174
N PL + I + +S G+ GR+ SG + + Q V I P +K + + N R
Sbjct: 365 NGPLMMYISKMVPTSDKGRFYAFGRVFSGTVATGQKVRIQGPHYVPGEKTDLYEKNIQRT 424
Query: 1175 FKGLDRVL--VNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNIDEPTLTINFMV 1231
+ R V + G+ + G+++ + S TI + + NI + +++ +V
Sbjct: 425 VLMMGRYTEQVQDVPCGNTCCLVGVDQYIVKSGTITTFKEAH-----NIADMKYSVSPVV 479
Query: 1232 NNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIEN 1291
+ + ++ K + ++ + L K++ + T ++ + I +SG GELH+ I +++
Sbjct: 480 RVA-VKPKDSKQLP--KLVDGLKKLAKSDPLVLCTTDESGEHI--ISGCGELHIEICLKD 534
Query: 1292 MRREGYELS--VSRPRVIFK 1309
++ E ++ VS P V ++
Sbjct: 535 LKDEYAQIDFIVSDPVVSYR 554
Score = 64 (27.6 bits), Expect = 3.0e-05, Sum P(5) = 3.0e-05
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGG 101
++++ HVDHGK++L D + K ++ S+ G
Sbjct: 22 MSVIAHVDHGKSTLTDSLVSKAGIISSKNAG 52
Score = 48 (22.0 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 26/120 (21%), Positives = 52/120 (43%)
Query: 1315 LYEPYENLFVDI---EEINQGIIMQKLNYRGGDLKNIEINEKERV-----RLEYRIPSRG 1366
L EP VDI +++ G+ LN R G I I+E++++ +++ +P
Sbjct: 714 LVEPI--YLVDISCPQDVVSGVY-GVLNKRRG----IVISEEQKLGTPLLKIQSHLPVSE 766
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKL 1426
GF + T G VF+ ++ Y+ +D K ++++ K + + +L
Sbjct: 767 SFGFTSALRAATSGQAFPQCVFDHWSVLYD-DPFDSNKNSYKIIMNIRERKGIKVEMPQL 825
Score = 43 (20.2 bits), Expect = 3.0e-05, Sum P(5) = 3.0e-05
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 349 LHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLT 383
L+ +++ ND +KEK +L I ++ G ++LT
Sbjct: 272 LNLCQSIMND-DKEKYTKMLTNIGVELKGDDKLLT 305
Score = 37 (18.1 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 1156 IMNGPDDKPNKAK-INQIRV-FKGLDRVLVNEAL 1187
IMN DDK K + I V KG D++L + L
Sbjct: 278 IMN--DDKEKYTKMLTNIGVELKGDDKLLTGKQL 309
>UNIPROTKB|Q8IKW5 [details] [associations]
symbol:PF14_0486 "Elongation factor 2" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 GO:GO:0003746 EMBL:AE014187
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HOGENOM:HOG000231589 KO:K03234 ProtClustDB:PTZ00416 OMA:YVKAQPI
HSSP:P32324 RefSeq:XP_001348660.1 ProteinModelPortal:Q8IKW5
SMR:Q8IKW5 IntAct:Q8IKW5 MINT:MINT-1659271 PRIDE:Q8IKW5
EnsemblProtists:PF14_0486:mRNA GeneID:812068 KEGG:pfa:PF14_0486
EuPathDB:PlasmoDB:PF3D7_1451100 Uniprot:Q8IKW5
Length = 832
Score = 247 (92.0 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 62/173 (35%), Positives = 94/173 (54%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYN-- 983
++IAHVDHGK+TL D L+ ++G +AR D+ + E+ER ITI S S+ +
Sbjct: 23 SVIAHVDHGKSTLTDSLVSKAGIISSKNAGDARFTDTRQDEQERCITIKSTGISMYFEHD 82
Query: 984 -----GTR---INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALK 1035
G + IN+ID+PGH DF EV L + D L+++D +EG QT V +AL
Sbjct: 83 LEDGEGKKPFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLYQALG 142
Query: 1036 LGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV-IYTSALHG 1087
KP++ VNK+DR+ + V+ D++ T E ++ + YT L G
Sbjct: 143 ERIKPVLHVNKVDRALLELQMEVE---DIYQTFARTIESVNVIISTYTDKLMG 192
Score = 94 (38.1 bits), Expect = 3.0e-05, Sum P(5) = 3.0e-05
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ +VTD ++VV +GV QT + A + ++ +NK
Sbjct: 94 INLIDSPGHVDFSSEVTAALRVTDGALVVVDTIEGVCVQTETVLYQALGERIKPVLHVNK 153
Query: 178 IDKLDINLDRIKQDL 192
+D+ + L +D+
Sbjct: 154 VDRALLELQMEVEDI 168
Score = 75 (31.5 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 44/200 (22%), Positives = 94/200 (47%)
Query: 1119 NNPLQLQIISLEYSSYLGKI-GIGRILSGRIKSLQDVVIMNG---PDDKPNKAKINQIRV 1174
N PL + I + +S G+ GR+ SG + + Q V I P +K + + N R
Sbjct: 365 NGPLMMYISKMVPTSDKGRFYAFGRVFSGTVATGQKVRIQGPHYVPGEKTDLYEKNIQRT 424
Query: 1175 FKGLDRVL--VNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNIDEPTLTINFMV 1231
+ R V + G+ + G+++ + S TI + + NI + +++ +V
Sbjct: 425 VLMMGRYTEQVQDVPCGNTCCLVGVDQYIVKSGTITTFKEAH-----NIADMKYSVSPVV 479
Query: 1232 NNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIEN 1291
+ + ++ K + ++ + L K++ + T ++ + I +SG GELH+ I +++
Sbjct: 480 RVA-VKPKDSKQLP--KLVDGLKKLAKSDPLVLCTTDESGEHI--ISGCGELHIEICLKD 534
Query: 1292 MRREGYELS--VSRPRVIFK 1309
++ E ++ VS P V ++
Sbjct: 535 LKDEYAQIDFIVSDPVVSYR 554
Score = 64 (27.6 bits), Expect = 3.0e-05, Sum P(5) = 3.0e-05
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 72 VTIMGHVDHGKTSLLD-YIRKTNVVFSEAGG 101
++++ HVDHGK++L D + K ++ S+ G
Sbjct: 22 MSVIAHVDHGKSTLTDSLVSKAGIISSKNAG 52
Score = 48 (22.0 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 26/120 (21%), Positives = 52/120 (43%)
Query: 1315 LYEPYENLFVDI---EEINQGIIMQKLNYRGGDLKNIEINEKERV-----RLEYRIPSRG 1366
L EP VDI +++ G+ LN R G I I+E++++ +++ +P
Sbjct: 714 LVEPI--YLVDISCPQDVVSGVY-GVLNKRRG----IVISEEQKLGTPLLKIQSHLPVSE 766
Query: 1367 LIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGVLISQYSGKAVAYSLWKL 1426
GF + T G VF+ ++ Y+ +D K ++++ K + + +L
Sbjct: 767 SFGFTSALRAATSGQAFPQCVFDHWSVLYD-DPFDSNKNSYKIIMNIRERKGIKVEMPQL 825
Score = 43 (20.2 bits), Expect = 3.0e-05, Sum P(5) = 3.0e-05
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 349 LHKTENMFNDINKEKVKNLLIIIKTDVYGSREVLT 383
L+ +++ ND +KEK +L I ++ G ++LT
Sbjct: 272 LNLCQSIMND-DKEKYTKMLTNIGVELKGDDKLLT 305
Score = 37 (18.1 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 1156 IMNGPDDKPNKAK-INQIRV-FKGLDRVLVNEAL 1187
IMN DDK K + I V KG D++L + L
Sbjct: 278 IMN--DDKEKYTKMLTNIGVELKGDDKLLTGKQL 309
>MGI|MGI:107339 [details] [associations]
symbol:Gfm1 "G elongation factor, mitochondrial 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003746 "translation elongation factor activity"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006184
"GTP catabolic process" evidence=ISO] [GO:0006412 "translation"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0070125 "mitochondrial translational elongation" evidence=ISO]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR004540
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
UniPathway:UPA00345 InterPro:IPR000640 Pfam:PF00679 MGI:MGI:107339
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
TIGRFAMs:TIGR00484 OMA:QEPGKGY GO:GO:0070125
GeneTree:ENSGT00550000074911 CTD:85476 OrthoDB:EOG4D52X3
EMBL:AF315511 EMBL:BC013093 EMBL:BC031772 IPI:IPI00230283
RefSeq:NP_613057.2 UniGene:Mm.122466 ProteinModelPortal:Q8K0D5
SMR:Q8K0D5 STRING:Q8K0D5 PhosphoSite:Q8K0D5 PaxDb:Q8K0D5
PRIDE:Q8K0D5 Ensembl:ENSMUST00000077271 GeneID:28030 KEGG:mmu:28030
UCSC:uc008plm.2 InParanoid:Q8K0D5 NextBio:306550 Bgee:Q8K0D5
CleanEx:MM_GFM1 Genevestigator:Q8K0D5 GermOnline:ENSMUSG00000027774
Uniprot:Q8K0D5
Length = 751
Score = 230 (86.0 bits), Expect = 7.0e-19, Sum P(3) = 7.0e-19
Identities = 52/133 (39%), Positives = 75/133 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G + + +MDS E+E++RGITI S
Sbjct: 52 ISAHIDSGKTTLTERVLYYTGRIATMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTM 111
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V+R+ + +
Sbjct: 112 WKDININIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVSRQMKRYNVPFL 171
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR + P
Sbjct: 172 TFINKLDRMGSNP 184
Score = 127 (49.8 bits), Expect = 5.7e-08, Sum P(5) = 5.7e-08
Identities = 34/95 (35%), Positives = 45/95 (47%)
Query: 101 GITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREA 160
GIT A + +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 100 GITIQSAATYTMWKDININIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTV 159
Query: 161 IAHAKISGVPLIVAINKIDKLDINLDRIKQDLISE 195
K VP + INK+D++ N R Q + S+
Sbjct: 160 SRQMKRYNVPFLTFINKLDRMGSNPSRALQQMRSK 194
Score = 84 (34.6 bits), Expect = 7.0e-19, Sum P(3) = 7.0e-19
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
V E +GDI + GI+ C G T + + + +++ EP ++I +N +
Sbjct: 409 VEEVYAGDICALFGID--CASGDTFTNKDNSDLSMESIHVPEPVISIAMRPSNKNDLEKF 466
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYEL 1299
K I R D K + ++K ++I VSG GELHL I + M RE G
Sbjct: 467 SKGIGRF---TREDPTFKVHFD---PESK--ETI--VSGMGELHLEIYAQRMEREYGCPC 516
Query: 1300 SVSRPRVIFK 1309
+P+V F+
Sbjct: 517 ITGKPKVAFR 526
Score = 53 (23.7 bits), Expect = 7.0e-19, Sum P(3) = 7.0e-19
Identities = 21/84 (25%), Positives = 34/84 (40%)
Query: 1312 NGEL--YEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIG 1369
NG L EP ++ V QG + +N R G + + E + L +P + G
Sbjct: 640 NGTLCIIEPIMSVEVIAPNEFQGTVFAGINRRHGVITGQDGIE-DYFTLYADVPLNNMFG 698
Query: 1370 FQNEFITLTRGTGLISHVFEEYAP 1393
+ E + T G G + + Y P
Sbjct: 699 YSTELRSCTEGKGEYTMEYCRYQP 722
Score = 43 (20.2 bits), Expect = 5.7e-08, Sum P(5) = 5.7e-08
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ I H+D GKT+L + +
Sbjct: 50 IGISAHIDSGKTTLTERV 67
Score = 41 (19.5 bits), Expect = 5.7e-08, Sum P(5) = 5.7e-08
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 674 LSSNNALKKIKYLLNAKKVG---YTGTLDPFATGLLPLCFGEATKFSNYLSEADK 725
L+ N++ +K K L+N ++ + G G FG+ T NY E K
Sbjct: 330 LNQNDSKEKTKILMNPQRDDSHPFVGLAFKLEAGR----FGQLTYVRNYQGELKK 380
Score = 41 (19.5 bits), Expect = 0.00092, Sum P(4) = 0.00092
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 467 EKKENLL-GLAEIRQVILVNKVSKIAGCYILEG 498
E KE ++ G+ E+ I ++ + GC + G
Sbjct: 487 ESKETIVSGMGELHLEIYAQRMEREYGCPCITG 519
>UNIPROTKB|Q5R600 [details] [associations]
symbol:GFM2 "Ribosome-releasing factor 2, mitochondrial"
species:9601 "Pongo abelii" [GO:0003924 "GTPase activity"
evidence=ISS] [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0032543 "mitochondrial translation" evidence=ISS] [GO:0032790
"ribosome disassembly" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR005517
Pfam:PF00009 Pfam:PF03144 Pfam:PF03764 PRINTS:PR00315
PROSITE:PS00301 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924
GO:GO:0032543 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0032790 InterPro:IPR009022
SMART:SM00838 SUPFAM:SSF54980 HOGENOM:HOG000231585 KO:K02355
HSSP:P13551 CTD:84340 EMBL:CR860700 RefSeq:NP_001126644.1
UniGene:Pab.18679 ProteinModelPortal:Q5R600 GeneID:100173642
KEGG:pon:100173642 InParanoid:Q5R600 Uniprot:Q5R600
Length = 777
Score = 235 (87.8 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 60/172 (34%), Positives = 93/172 (54%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L SG R +++ + D E+ERGITI S + ++ G
Sbjct: 75 IMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDWKG 134
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R+N+IDTPGH DF EVER L ++D + + DA G QT V R+A K I +
Sbjct: 135 YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHNIPRICFL 194
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKAR 1096
NK+D++ A ++ V++ + +KL A L P+ G + +K +
Sbjct: 195 NKMDKTGASFKYAVES---IREKLKAKPLLLQLPIGEAKTFKGVVDVVTKEK 243
Score = 103 (41.3 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 53/195 (27%), Positives = 81/195 (41%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G VD G T + D++ + GIT A + +DTPGH FT
Sbjct: 100 LGDVDDGDT-VTDFMAQ-----ERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVE 153
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDIN----LDRIKQ 190
R +V D V V A GV QT A +P I +NK+DK + ++ I++
Sbjct: 154 RCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHNIPRICFLNKMDKTGASFKYAVESIRE 213
Query: 191 DLISEQVIPE-EYGGASPFISISAKTGVGINKLLENISL-------QAEILELKAPV--- 239
L ++ ++ + G A F + V KLL N + + +LE+ P
Sbjct: 214 KLKAKPLLLQLPIGEAKTFKGVVDV--VTKEKLLWNCNSNDGKDFERKPLLEMNDPELLK 271
Query: 240 -TTPAKGVIIESRLD 253
TT A+ +IE D
Sbjct: 272 ETTEARNALIEQVAD 286
Score = 70 (29.7 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 21/101 (20%), Positives = 45/101 (44%)
Query: 1309 KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
K + ++ EP NL V + ++ L R G+++ I+ + +V + + +P ++
Sbjct: 677 KKADKQVLEPLMNLEVTVARDYLSPVLADLAQRRGNIQEIQTRQDNKVVIGF-VPLAEIM 735
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
G+ TLT G+ + + + L RR+G+
Sbjct: 736 GYSTVLRTLTSGSATFALELSTNQAMNPQDQNTLLNRRSGL 776
Score = 60 (26.2 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 46/191 (24%), Positives = 80/191 (41%)
Query: 1136 GKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLIT 1195
G + RI SG IK + +NG + +I+++ + V + +G+I L
Sbjct: 381 GPLVFMRIYSGTIKPQLAIHNINGNCTE----RISRLLLPFADQHVEIPSLTAGNIALTV 436
Query: 1196 GIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVNNSP----LAG---REGKFITTRQ 1248
G++ G TI SK + L E N+ LAG E F T +
Sbjct: 437 GLKHTATGDTIVS-SKSSALAAARRAEREGEKKHRQNSEAERLVLAGVEIPEPVFFCTIE 495
Query: 1249 ---IKNR--LDHEIK----NNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYE 1298
+ + L+H +K + L+V + D + G GELH+ I+ + ++RE G E
Sbjct: 496 PPSVSKQPDLEHALKCLQREDPSLKVRLDP-DSGQTVLCGMGELHIEIIHDRIKREYGLE 554
Query: 1299 LSVSRPRVIFK 1309
+ +V ++
Sbjct: 555 AYLGPLQVAYR 565
Score = 46 (21.3 bits), Expect = 7.7e-19, Sum P(4) = 7.7e-19
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 65 SLVRAPI-----VTIMGHVDHGKTSLLDYI 89
S++ PI + IM H+D GKT+ + I
Sbjct: 61 SIINPPIAKIRNIGIMAHIDAGKTTTTERI 90
Score = 44 (20.5 bits), Expect = 2.3e-05, Sum P(5) = 2.3e-05
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 253 DKGKGPVATVLIQSGTLR 270
DK +GP+ + I SGT++
Sbjct: 377 DKQRGPLVFMRIYSGTIK 394
>CGD|CAL0001783 [details] [associations]
symbol:FUN12 species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISO;IGI]
[GO:0006413 "translational initiation" evidence=ISO;IGI]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0022627 "cytosolic
small ribosomal subunit" evidence=IEA] [GO:0006446 "regulation of
translational initiation" evidence=IEA] [GO:0043022 "ribosome
binding" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 CGD:CAL0001783 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 EMBL:AACQ01000053 EMBL:AACQ01000052
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156 KO:K03243
RefSeq:XP_717545.1 RefSeq:XP_717619.1 STRING:Q5A782 GeneID:3640713
GeneID:3640802 KEGG:cal:CaO19.12547 KEGG:cal:CaO19.5081
Uniprot:Q5A782
Length = 1017
Score = 143 (55.4 bits), Expect = 8.7e-19, Sum P(3) = 8.7e-19
Identities = 30/46 (65%), Positives = 35/46 (76%)
Query: 63 AESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA 108
+E +R+PI I+GHVD GKT LLD IR+TNV EAGGITQ IGA
Sbjct: 414 SEKDLRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGA 459
Score = 142 (55.0 bits), Expect = 8.7e-19, Sum P(3) = 8.7e-19
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGHE+FT +R+RG+ + +I +LV+ G+ QT E+I + P +VA+NK
Sbjct: 487 LLIIDTPGHESFTNLRSRGSSLCNIAILVIDIMHGLEQQTLESIRLLRDRKAPFVVALNK 546
Query: 178 IDKL 181
ID+L
Sbjct: 547 IDRL 550
Score = 90 (36.7 bits), Expect = 8.7e-19, Sum P(3) = 8.7e-19
Identities = 82/393 (20%), Positives = 157/393 (39%)
Query: 183 INLDRIKQDLISEQVIPEEYGGASPFISI---SAKTGVGINKLLENI-SLQAEILELKAP 238
I L +Q L SE + S ++SI SA TG G+ LL + L + + +
Sbjct: 583 IKLALAEQGLNSELYFQNK--NMSKYVSIVPTSAVTGEGVPDLLWLLLELTQKRMSKQLM 640
Query: 239 VTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYG----RIRSMLNENGKN 294
+ I+E ++ +G G V++ +G LR D VV G IR++L
Sbjct: 641 YLSKVAATILEVKVVEGFGYTIDVVLSNGILREGDRVVLCGLNGPIATNIRALLTPPPSR 700
Query: 295 ILEAGPSIP--VEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDV-KLSKQKLHK 351
L E++ V + +L EK L G+ D +L + +
Sbjct: 701 ELRIKSEYVHHKEVKAALGVKIAANDL-----EKAVAGSRLLVVGEDDDEDELMDEVMDD 755
Query: 352 TENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDI 411
+ + ++ K ++++ GS E L + LK++ KI V+ +G + + D+
Sbjct: 756 LTGLLDSVDTSG-KG--VVVQASTLGSLEALLDFLKDM-----KIPVMSIGLGPVYKRDV 807
Query: 412 NLAIA------SKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIP 465
A A+++ F+V+ D + A + L+
Sbjct: 808 MKASTMLERAPELAVMLCFDVKVDKEAEQYADEQNIKIFNADIIYHLFDSFTAYQAKLLE 867
Query: 466 LEKKENL---LGLAEIRQVILVNKVSK-IAGCYILEGLIRRDSKIRILRNK------NII 515
+KE + + ++ + ++NK + I G ++EG +R + I +R NI+
Sbjct: 868 ARRKEFMEYAVFPCVLKTIQIINKRNPMIIGVDVVEGAVRVGTPICAVRTDPTTKQPNIM 927
Query: 516 WTGELDSLKRFKDNVKEVKAGFECERLS-RIEN 547
G++ SL+ ++ VK G ++ R++N
Sbjct: 928 VLGKVVSLEVNHKPLESVKKGQTAAGVAMRLDN 960
>UNIPROTKB|Q5A782 [details] [associations]
symbol:FUN12 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=IGI] [GO:0006413
"translational initiation" evidence=IGI] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 CGD:CAL0001783 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 EMBL:AACQ01000053 EMBL:AACQ01000052
GO:GO:0003743 InterPro:IPR009000 SUPFAM:SSF50447 eggNOG:COG0532
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156 KO:K03243
RefSeq:XP_717545.1 RefSeq:XP_717619.1 STRING:Q5A782 GeneID:3640713
GeneID:3640802 KEGG:cal:CaO19.12547 KEGG:cal:CaO19.5081
Uniprot:Q5A782
Length = 1017
Score = 143 (55.4 bits), Expect = 8.7e-19, Sum P(3) = 8.7e-19
Identities = 30/46 (65%), Positives = 35/46 (76%)
Query: 63 AESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA 108
+E +R+PI I+GHVD GKT LLD IR+TNV EAGGITQ IGA
Sbjct: 414 SEKDLRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGA 459
Score = 142 (55.0 bits), Expect = 8.7e-19, Sum P(3) = 8.7e-19
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGHE+FT +R+RG+ + +I +LV+ G+ QT E+I + P +VA+NK
Sbjct: 487 LLIIDTPGHESFTNLRSRGSSLCNIAILVIDIMHGLEQQTLESIRLLRDRKAPFVVALNK 546
Query: 178 IDKL 181
ID+L
Sbjct: 547 IDRL 550
Score = 90 (36.7 bits), Expect = 8.7e-19, Sum P(3) = 8.7e-19
Identities = 82/393 (20%), Positives = 157/393 (39%)
Query: 183 INLDRIKQDLISEQVIPEEYGGASPFISI---SAKTGVGINKLLENI-SLQAEILELKAP 238
I L +Q L SE + S ++SI SA TG G+ LL + L + + +
Sbjct: 583 IKLALAEQGLNSELYFQNK--NMSKYVSIVPTSAVTGEGVPDLLWLLLELTQKRMSKQLM 640
Query: 239 VTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYG----RIRSMLNENGKN 294
+ I+E ++ +G G V++ +G LR D VV G IR++L
Sbjct: 641 YLSKVAATILEVKVVEGFGYTIDVVLSNGILREGDRVVLCGLNGPIATNIRALLTPPPSR 700
Query: 295 ILEAGPSIP--VEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDV-KLSKQKLHK 351
L E++ V + +L EK L G+ D +L + +
Sbjct: 701 ELRIKSEYVHHKEVKAALGVKIAANDL-----EKAVAGSRLLVVGEDDDEDELMDEVMDD 755
Query: 352 TENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDI 411
+ + ++ K ++++ GS E L + LK++ KI V+ +G + + D+
Sbjct: 756 LTGLLDSVDTSG-KG--VVVQASTLGSLEALLDFLKDM-----KIPVMSIGLGPVYKRDV 807
Query: 412 NLAIA------SKAIIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIP 465
A A+++ F+V+ D + A + L+
Sbjct: 808 MKASTMLERAPELAVMLCFDVKVDKEAEQYADEQNIKIFNADIIYHLFDSFTAYQAKLLE 867
Query: 466 LEKKENL---LGLAEIRQVILVNKVSK-IAGCYILEGLIRRDSKIRILRNK------NII 515
+KE + + ++ + ++NK + I G ++EG +R + I +R NI+
Sbjct: 868 ARRKEFMEYAVFPCVLKTIQIINKRNPMIIGVDVVEGAVRVGTPICAVRTDPTTKQPNIM 927
Query: 516 WTGELDSLKRFKDNVKEVKAGFECERLS-RIEN 547
G++ SL+ ++ VK G ++ R++N
Sbjct: 928 VLGKVVSLEVNHKPLESVKKGQTAAGVAMRLDN 960
>ZFIN|ZDB-GENE-030131-4289 [details] [associations]
symbol:guf1 "GUF1 GTPase homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0043022
"ribosome binding" evidence=IEA] HAMAP:MF_00071 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006297
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 ZFIN:ZDB-GENE-030131-4289
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005743 GO:GO:0005759
GO:GO:0006412 GO:GO:0003924 GO:GO:0006184 GO:GO:0043022
GO:GO:0045727 Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393 CTD:60558
GeneTree:ENSGT00550000074940 EMBL:BX088718 IPI:IPI00961493
RefSeq:XP_002664348.1 UniGene:Dr.156462 UniGene:Dr.79836
Ensembl:ENSDART00000042672 GeneID:553030 KEGG:dre:553030
NextBio:20879922 Bgee:E7FFK6 Uniprot:E7FFK6
Length = 672
Score = 270 (100.1 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 62/151 (41%), Positives = 90/151 (59%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--N 983
+IIAH+DHGK+TL D LL +G K + N +++D ++E+ERGIT+ ++ S+ Y +
Sbjct: 78 SIIAHIDHGKSTLADRLLEMTGAIAKTAS-NKQVLDKLQVERERGITVKAQTASLFYQHH 136
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
G +N+IDTPGH DF EV R +S VLL++DA +G QT A + I
Sbjct: 137 GQTYLLNLIDTPGHVDFSYEVSRSISACQGVLLIVDANQGIQAQTVANFYLAFEAQLAII 196
Query: 1042 VVVNKIDRSNARPEWV---VDATFDLFDKLC 1069
V+NKID NA PE V ++ FD+ + C
Sbjct: 197 PVINKIDLKNADPERVEKQIETVFDIPKEEC 227
Score = 159 (61.0 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 51/182 (28%), Positives = 91/182 (50%)
Query: 114 NHGS---ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP 170
+HG + +DTPGH F+ +R V+L+V A+ G+ QT A + +
Sbjct: 135 HHGQTYLLNLIDTPGHVDFSYEVSRSISACQGVLLIVDANQGIQAQTVANFYLAFEAQLA 194
Query: 171 LIVAINKIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQA 230
+I INKID + + +R+++ + + IP+E I ISAK G + ++L+ + +
Sbjct: 195 IIPVINKIDLKNADPERVEKQIETVFDIPKE-----ECIRISAKLGTNVEQVLQEVVKRI 249
Query: 231 EILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNE 290
++ V P KG++ +S D +G VA + + G + D +V+ A G+ + NE
Sbjct: 250 PPPAVR--VEDPFKGLVFDSTFDHYRGVVANIALFGGRVSRGDRIVS-AHLGKSFEV-NE 305
Query: 291 NG 292
G
Sbjct: 306 LG 307
Score = 54 (24.1 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 73 TIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHG 116
+I+ H+DHGK++L D + + ++ Q + V G
Sbjct: 78 SIIAHIDHGKSTLADRLLEMTGAIAKTASNKQVLDKLQVERERG 121
Score = 47 (21.6 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 39/235 (16%), Positives = 97/235 (41%)
Query: 1095 ARQG-NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQD 1153
A+ G N+ + + ++K +P +P + + + Y G + + GR+
Sbjct: 232 AKLGTNVEQVLQEVVKRIPPPAVRVEDPFKGLVFDSTFDHYRGVVANIALFGGRVSRGDR 291
Query: 1154 VVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDI-VLITGIEEIC---IGSTICDP 1209
+V + ++N++ + + D+ +G + +I G++E+ IG T+
Sbjct: 292 IVSAH----LGKSFEVNELGILRP-DQHPTETLYAGQVGYVIAGMKEVKEAQIGDTLYLH 346
Query: 1210 SKP-NGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQN 1268
+P LP +P + P+ + ++ R +L +++ ++ +
Sbjct: 347 KQPVEALPGFKPAKPMVFAGMY----PMD--QSEYTALRSALEKLTLN-DSSVSIQKDSS 399
Query: 1269 KHDDSIYEVSGRGELHLTILIENMRREGYELSV--SRPRVIFKTL--NGELYEPY 1319
+ + + G LH+ + + + +E Y SV + P V +K + + +L + Y
Sbjct: 400 LALGAGWRLGFLGLLHMEVFNQRLEQE-YNASVIITAPTVPYKAVLASAKLIKEY 453
Score = 43 (20.2 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI-GFQNEFITLTRG 1380
G IM R G KN+ + RV ++Y P ++ F ++ +++ G
Sbjct: 492 GKIMTLCQGRRGIQKNMVYIDDHRVMMKYVFPLNEIVVDFYDQLKSMSSG 541
>TIGR_CMR|BA_3042 [details] [associations]
symbol:BA_3042 "GTP-binding elongation factor protein,
TetM/TetO family" species:198094 "Bacillus anthracis str. Ames"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS]
InterPro:IPR000795 InterPro:IPR002127 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PRINTS:PR01037 PROSITE:PS00301
SMART:SM00889 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003924 GO:GO:0006184 GO:GO:0046677
GO:GO:0005622 GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022
SUPFAM:SSF54980 HSSP:P13551 RefSeq:NP_845373.1 RefSeq:YP_019683.1
RefSeq:YP_029086.1 ProteinModelPortal:Q81NX9 DNASU:1088193
EnsemblBacteria:EBBACT00000012776 EnsemblBacteria:EBBACT00000017569
EnsemblBacteria:EBBACT00000020592 GeneID:1088193 GeneID:2817493
GeneID:2852110 KEGG:ban:BA_3042 KEGG:bar:GBAA_3042 KEGG:bat:BAS2828
HOGENOM:HOG000231588 OMA:IFKIERG ProtClustDB:CLSK916905
BioCyc:BANT260799:GJAJ-2891-MONOMER
BioCyc:BANT261594:GJ7F-2995-MONOMER Uniprot:Q81NX9
Length = 647
Score = 262 (97.3 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 57/138 (41%), Positives = 85/138 (61%)
Query: 923 IKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIM--DSNEIEKERGITIFSKNCSI 980
I I+AHVD GKT+L + +L ++ ++ +++ DS E+E++RGITI + S
Sbjct: 4 INIEIVAHVDAGKTSLTERILYETNVIKEVGRVDSGSTQTDSMELERQRGITIKASVVSF 63
Query: 981 EYNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+ ++N+IDTPGHADF EVER ++D +L+I AVEG QT+ + + KL
Sbjct: 64 FIDDIKVNVIDTPGHADFIAEVERSFRVLDGAILVISAVEGVQAQTKILMQTLQKLNIPT 123
Query: 1041 IVVVNKIDRSNARPEWVV 1058
I+ VNKIDR+ A E VV
Sbjct: 124 ILFVNKIDRTGANTEKVV 141
Score = 143 (55.4 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 44/179 (24%), Positives = 83/179 (46%)
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSIT 119
++T L ++ +G VD G T + ++ GIT + + +
Sbjct: 18 SLTERILYETNVIKEVGRVDSGST------QTDSMELERQRGITIKASVVSFFIDDIKVN 71
Query: 120 FLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
+DTPGH F A R +V D +LV++A +GV QT+ + + +P I+ +NKID
Sbjct: 72 VIDTPGHADFIAEVERSFRVLDGAILVISAVEGVQAQTKILMQTLQKLNIPTILFVNKID 131
Query: 180 KLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAP 238
+ N +++ + + + ++ E PF S+ + G +++E S + +E AP
Sbjct: 132 RTGANTEKVVKQI--KTILSNE---TFPFYSVQNE-GTKEARIIEYKSYD-DCIERLAP 183
>MGI|MGI:2141969 [details] [associations]
symbol:Eftud1 "elongation factor Tu GTP binding domain
containing 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003746 "translation elongation factor
activity" evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006184 "GTP catabolic
process" evidence=ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043022 "ribosome binding"
evidence=ISO] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 MGI:MGI:2141969
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0043022
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0042256 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 CTD:79631 HOGENOM:HOG000231586
HOVERGEN:HBG101597 KO:K14536 OMA:MYTCEIM EMBL:AK028676
EMBL:AK031647 EMBL:BC031852 EMBL:BC045616 IPI:IPI00453532
RefSeq:NP_001153144.1 RefSeq:NP_780526.2 UniGene:Mm.238020
HSSP:O26359 ProteinModelPortal:Q8C0D5 SMR:Q8C0D5 STRING:Q8C0D5
PhosphoSite:Q8C0D5 PaxDb:Q8C0D5 PRIDE:Q8C0D5
Ensembl:ENSMUST00000039881 Ensembl:ENSMUST00000179489 GeneID:101592
KEGG:mmu:101592 UCSC:uc009ide.2 GeneTree:ENSGT00550000074806
InParanoid:Q8C0D5 OrthoDB:EOG4JHCF0 NextBio:355030 Bgee:Q8C0D5
Genevestigator:Q8C0D5 Uniprot:Q8C0D5
Length = 1127
Score = 268 (99.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 57/127 (44%), Positives = 78/127 (61%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY-NGT 985
++AHVDHGKTTL D L+ +G R MDS E E+ RGIT+ S S+ Y G
Sbjct: 24 VLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSREDEQVRGITMKSSAISLHYAEGH 83
Query: 986 R---INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
IN+ID+PGH DF EV + + D ++++DAVEG PQT+ V R+A +P++
Sbjct: 84 EEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVL 143
Query: 1043 VVNKIDR 1049
V+NKIDR
Sbjct: 144 VINKIDR 150
Score = 122 (48.0 bits), Expect = 5.9e-05, Sum P(4) = 5.9e-05
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ + ++ D ++VV A +GV PQT+ + A + + ++ INK
Sbjct: 88 INLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVLVINK 147
Query: 178 IDKLDINLDRIKQDLIS 194
ID+L + L Q+ S
Sbjct: 148 IDRLIVELKFTPQEAYS 164
Score = 67 (28.6 bits), Expect = 5.9e-05, Sum P(4) = 5.9e-05
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 72 VTIMGHVDHGKTSLLDYIRKTNVVFS 97
+ ++ HVDHGKT+L D + +N + S
Sbjct: 22 ICVLAHVDHGKTTLADCLISSNGIIS 47
Score = 53 (23.7 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 32/132 (24%), Positives = 63/132 (47%)
Query: 1183 VNEALSGDIVLITGIEEICIGS-TICD-PSKPNGLPMLNIDEPTLTINFMVNNSPLAGRE 1240
+ E G+++ I G+++ + S T+C PS P +P LN E T + V P E
Sbjct: 574 LEEVPPGNVLGIGGLQDFVLKSATLCSLPSCPPFIP-LNF-EATPIVRVAVE--PKHPSE 629
Query: 1241 -GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE--GY 1297
+ + ++ N+ D ++ + ++ T +H + GE+HL ++++R
Sbjct: 630 MPQLVKGMKLLNQADPCVQ--VLIQET-GEH-----VLVTAGEVHLQRCLDDLRERFAKI 681
Query: 1298 ELSVSRPRVIFK 1309
+SVS P + F+
Sbjct: 682 HISVSEPIIPFR 693
Score = 46 (21.3 bits), Expect = 0.00027, Sum P(4) = 0.00027
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 512 KNIIWTG----ELDSLKRFKDNVKEVKAGFECERLS 543
+N +W+G E RF+D + +GF+ LS
Sbjct: 844 QNSVWSGPAGRESKEASRFRDFGNSIVSGFQLATLS 879
Score = 43 (20.2 bits), Expect = 5.9e-05, Sum P(4) = 5.9e-05
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 280 SYGRIRSMLNENGKNILEAGPSI-PVEIQGLTKVP 313
++ R+ S + GK I GP PV+ L +VP
Sbjct: 507 AFARVFSGIARRGKKIFVLGPKYSPVDF--LQRVP 539
Score = 42 (19.8 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 24/82 (29%), Positives = 33/82 (40%)
Query: 1205 TICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLR 1264
TI P+K L + I P + NS L R + +T+ + R I
Sbjct: 741 TIPTPNKLATLSVRAIPLPEEVTRILEENSDLI-RSMELLTSSLNEGRNTQAIHQK---- 795
Query: 1265 VTQNKHDDSIYEVSGRGELHLT 1286
TQ K I+E G+ E HLT
Sbjct: 796 -TQEK----IWEFKGKLEKHLT 812
Score = 42 (19.8 bits), Expect = 0.00065, Sum P(4) = 0.00065
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 484 VNKVSKIAGCYILEGLIRRDSKIRIL-RNK 512
+N V K G Y+ E ++ K R L +NK
Sbjct: 1098 MNAVRKRKGLYVEEKIVEHAEKQRTLSKNK 1127
Score = 38 (18.4 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 758 EIIEKILINFHGKISQIPPMYSALK 782
E +EK+L +PP ALK
Sbjct: 372 ERVEKLLCTGSQTFESLPPETQALK 396
>RGD|1309854 [details] [associations]
symbol:Gfm2 "G elongation factor, mitochondrial 2" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA;ISO;ISS] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006184 "GTP
catabolic process" evidence=ISO;ISS] [GO:0032543 "mitochondrial
translation" evidence=ISO;ISS] [GO:0032790 "ribosome disassembly"
evidence=ISO;ISS] [GO:0003746 "translation elongation factor
activity" evidence=ISO] [GO:0070125 "mitochondrial translational
elongation" evidence=ISO] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 RGD:1309854 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0032543
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 EMBL:CH473955 GO:GO:0032790 InterPro:IPR009022
SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585
HSSP:P13551 EMBL:BC091392 IPI:IPI00360287 UniGene:Rn.231903
ProteinModelPortal:Q5BJP6 STRING:Q5BJP6 UCSC:RGD:1309854
NextBio:638383 ArrayExpress:Q5BJP6 Genevestigator:Q5BJP6
Uniprot:Q5BJP6
Length = 779
Score = 232 (86.7 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 58/155 (37%), Positives = 88/155 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L SG R +++ + D E+ERGITI S ++++ G
Sbjct: 75 IMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTLDWKG 134
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R+N+IDTPGH DF EVER L ++D + + DA G QT V R+A K I +
Sbjct: 135 YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKIPRICFL 194
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
NK+D++ A + V++ + +KL A L P+
Sbjct: 195 NKMDKTGASFNYAVES---IREKLKAKPLILQLPI 226
Score = 102 (41.0 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 34/106 (32%), Positives = 46/106 (43%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G VD G T + D++ + GIT A + + +DTPGH FT
Sbjct: 100 LGDVDDGDT-VTDFMAQ-----ERERGITIQSAAVTLDWKGYRVNLIDTPGHVDFTLEVE 153
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
R +V D V V A GV QT A +P I +NK+DK
Sbjct: 154 RCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKIPRICFLNKMDK 199
Score = 73 (30.8 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 21/101 (20%), Positives = 46/101 (45%)
Query: 1309 KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
K + ++ EP +L V + ++ L R G+++ I+ + +V L + +P ++
Sbjct: 676 KKADKQVLEPLMSLEVTVSREYLSPVLADLAQRRGNIQEIQTRQDNKVVLGF-VPLAEIM 734
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
G+ TLT G+ + Y + + L +R+G+
Sbjct: 735 GYSTVLRTLTSGSATFALELSTYQAMSPQDQRTLLSQRSGL 775
Score = 57 (25.1 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 61/273 (22%), Positives = 112/273 (41%)
Query: 1062 FDLF--DKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSN 1119
FDL +KL A ++ L G A +N K Q PL +A+ Y+P ++ +
Sbjct: 303 FDLVPAEKLQAAIHRVTLAQAAVPVLCGSALKN-KGVQ----PLLDAVTTYLPSPEEREH 357
Query: 1120 NPLQL---QIISLEYS----SYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQI 1172
LQ + +L + G + RI SG + V +N + +++++
Sbjct: 358 GFLQWYKGDLCALAFKVLHDKQRGPLVFLRIYSGTLTPQSAVHNVN----RNCTERMSRL 413
Query: 1173 RVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVN 1232
+ V + +G+I L G+++ G TI SK + L ++
Sbjct: 414 LLPFADQHVEIPSLTAGNIALTVGLKQTATGDTIVS-SKSSALAAARRAGKGERKPGRIS 472
Query: 1233 NSP---LAG---REGKFITT-------RQ--IKNRLDHEIKNNIGLRVTQNKHDDSIYEV 1277
+ LAG E F T +Q + + L+H + + L+V + D +
Sbjct: 473 EAESVLLAGVEIPEPVFFCTIEPPSAAKQPDLDHALEHLQREDPSLKVKLDP-DSGQTVL 531
Query: 1278 SGRGELHLTILIENMRRE-GYELSVSRPRVIFK 1309
G GELH+ I+ + ++RE G E + +V ++
Sbjct: 532 CGMGELHIEIIHDRIKREYGLETYLGPLQVAYR 564
Score = 47 (21.6 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 47 NDPESFLLNEYNKNITAESLVRAPI-----VTIMGHVDHGKTSLLDYI 89
+ P + NE K++ S++ P+ + IM H+D GKT+ + I
Sbjct: 46 SSPPGIVGNEV-KSL--HSIINPPVAKIRNIGIMAHIDAGKTTTTERI 90
Score = 42 (19.8 bits), Expect = 4.3e-17, Sum P(4) = 4.3e-17
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 1135 LGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKI-NQIRVFKGLDRVLVNEALSGDIVL 1193
+G++ I I+ RIK + GP + I N +R LDRVL ++ L
Sbjct: 534 MGELHI-EIIHDRIKREYGLETYLGPLQVAYRETILNSVRATDTLDRVLGDKRHFARAEL 592
Query: 1194 -ITGIEEICIGSTI 1206
+ EE C +TI
Sbjct: 593 EVRPAEEPCGVATI 606
>UNIPROTKB|Q5BJP6 [details] [associations]
symbol:Gfm2 "Ribosome-releasing factor 2, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 RGD:1309854 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0032543
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 EMBL:CH473955 GO:GO:0032790 InterPro:IPR009022
SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585
HSSP:P13551 EMBL:BC091392 IPI:IPI00360287 UniGene:Rn.231903
ProteinModelPortal:Q5BJP6 STRING:Q5BJP6 UCSC:RGD:1309854
NextBio:638383 ArrayExpress:Q5BJP6 Genevestigator:Q5BJP6
Uniprot:Q5BJP6
Length = 779
Score = 232 (86.7 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 58/155 (37%), Positives = 88/155 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L SG R +++ + D E+ERGITI S ++++ G
Sbjct: 75 IMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTLDWKG 134
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R+N+IDTPGH DF EVER L ++D + + DA G QT V R+A K I +
Sbjct: 135 YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKIPRICFL 194
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPV 1079
NK+D++ A + V++ + +KL A L P+
Sbjct: 195 NKMDKTGASFNYAVES---IREKLKAKPLILQLPI 226
Score = 102 (41.0 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 34/106 (32%), Positives = 46/106 (43%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G VD G T + D++ + GIT A + + +DTPGH FT
Sbjct: 100 LGDVDDGDT-VTDFMAQ-----ERERGITIQSAAVTLDWKGYRVNLIDTPGHVDFTLEVE 153
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
R +V D V V A GV QT A +P I +NK+DK
Sbjct: 154 RCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKIPRICFLNKMDK 199
Score = 73 (30.8 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 21/101 (20%), Positives = 46/101 (45%)
Query: 1309 KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
K + ++ EP +L V + ++ L R G+++ I+ + +V L + +P ++
Sbjct: 676 KKADKQVLEPLMSLEVTVSREYLSPVLADLAQRRGNIQEIQTRQDNKVVLGF-VPLAEIM 734
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
G+ TLT G+ + Y + + L +R+G+
Sbjct: 735 GYSTVLRTLTSGSATFALELSTYQAMSPQDQRTLLSQRSGL 775
Score = 57 (25.1 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 61/273 (22%), Positives = 112/273 (41%)
Query: 1062 FDLF--DKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSN 1119
FDL +KL A ++ L G A +N K Q PL +A+ Y+P ++ +
Sbjct: 303 FDLVPAEKLQAAIHRVTLAQAAVPVLCGSALKN-KGVQ----PLLDAVTTYLPSPEEREH 357
Query: 1120 NPLQL---QIISLEYS----SYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQI 1172
LQ + +L + G + RI SG + V +N + +++++
Sbjct: 358 GFLQWYKGDLCALAFKVLHDKQRGPLVFLRIYSGTLTPQSAVHNVN----RNCTERMSRL 413
Query: 1173 RVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFMVN 1232
+ V + +G+I L G+++ G TI SK + L ++
Sbjct: 414 LLPFADQHVEIPSLTAGNIALTVGLKQTATGDTIVS-SKSSALAAARRAGKGERKPGRIS 472
Query: 1233 NSP---LAG---REGKFITT-------RQ--IKNRLDHEIKNNIGLRVTQNKHDDSIYEV 1277
+ LAG E F T +Q + + L+H + + L+V + D +
Sbjct: 473 EAESVLLAGVEIPEPVFFCTIEPPSAAKQPDLDHALEHLQREDPSLKVKLDP-DSGQTVL 531
Query: 1278 SGRGELHLTILIENMRRE-GYELSVSRPRVIFK 1309
G GELH+ I+ + ++RE G E + +V ++
Sbjct: 532 CGMGELHIEIIHDRIKREYGLETYLGPLQVAYR 564
Score = 47 (21.6 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 47 NDPESFLLNEYNKNITAESLVRAPI-----VTIMGHVDHGKTSLLDYI 89
+ P + NE K++ S++ P+ + IM H+D GKT+ + I
Sbjct: 46 SSPPGIVGNEV-KSL--HSIINPPVAKIRNIGIMAHIDAGKTTTTERI 90
Score = 42 (19.8 bits), Expect = 4.3e-17, Sum P(4) = 4.3e-17
Identities = 22/74 (29%), Positives = 33/74 (44%)
Query: 1135 LGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKI-NQIRVFKGLDRVLVNEALSGDIVL 1193
+G++ I I+ RIK + GP + I N +R LDRVL ++ L
Sbjct: 534 MGELHI-EIIHDRIKREYGLETYLGPLQVAYRETILNSVRATDTLDRVLGDKRHFARAEL 592
Query: 1194 -ITGIEEICIGSTI 1206
+ EE C +TI
Sbjct: 593 EVRPAEEPCGVATI 606
>ZFIN|ZDB-GENE-061013-79 [details] [associations]
symbol:gfm1 "G elongation factor, mitochondrial 1"
species:7955 "Danio rerio" [GO:0003746 "translation elongation
factor activity" evidence=IEA;ISS] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] [GO:0070125 "mitochondrial
translational elongation" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=IEA;ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 ZFIN:ZDB-GENE-061013-79
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
TIGRFAMs:TIGR00484 GO:GO:0070125 OMA:FMGSAYK
GeneTree:ENSGT00550000074911 EMBL:BC124798 IPI:IPI00803402
RefSeq:NP_001073463.1 UniGene:Dr.76563 ProteinModelPortal:Q08BB1
STRING:Q08BB1 PRIDE:Q08BB1 Ensembl:ENSDART00000093152 GeneID:561840
KEGG:dre:561840 CTD:85476 InParanoid:Q08BB1 OrthoDB:EOG4D52X3
NextBio:20884118 Bgee:Q08BB1 Uniprot:Q08BB1
Length = 745
Score = 231 (86.4 bits), Expect = 1.6e-18, Sum P(4) = 1.6e-18
Identities = 54/133 (40%), Positives = 75/133 (56%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINAR-----IMDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTTL + +L +G + + + IMDS E+E++RGITI S
Sbjct: 46 ISAHIDSGKTTLTERVLYYTGRIAEMHEVRGKDGVGAIMDSMELERQRGITIQSAATYTM 105
Query: 982 YNGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPI 1041
+ INIIDTPGH DF EVER L ++D +L++ AV G QT V R+ + +
Sbjct: 106 WKNHNINIIDTPGHVDFTIEVERSLRVLDGAVLVLCAVGGVQCQTVTVNRQMKRYSVPFL 165
Query: 1042 VVVNKIDRSNARP 1054
+NK+DR A P
Sbjct: 166 TFINKLDRLGANP 178
Score = 142 (55.0 bits), Expect = 1.4e-09, Sum P(5) = 1.4e-09
Identities = 38/93 (40%), Positives = 47/93 (50%)
Query: 101 GIT-QHIGAYNVVTNHGSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTRE 159
GIT Q Y + NH +I +DTPGH FT R +V D VLV+ A GV QT
Sbjct: 94 GITIQSAATYTMWKNH-NINIIDTPGHVDFTIEVERSLRVLDGAVLVLCAVGGVQCQTVT 152
Query: 160 AIAHAKISGVPLIVAINKIDKLDINLDRIKQDL 192
K VP + INK+D+L N +R Q L
Sbjct: 153 VNRQMKRYSVPFLTFINKLDRLGANPNRALQQL 185
Score = 85 (35.0 bits), Expect = 1.6e-18, Sum P(4) = 1.6e-18
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 1183 VNEALSGDIVLITGIEEICI-GSTICDPSKPN-GLPMLNIDEPTLTINFMVNNSPLAGRE 1240
V A +GDI + GI+ C G T + N + +++ EP +++ +N +
Sbjct: 403 VEVAYAGDICALFGID--CASGDTFTARNNANLSMESIHVPEPVISMAIRPSNKNDTDKL 460
Query: 1241 GKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELS 1300
K I+ R D + + T++K ++I +SG GELHL I + M RE Y
Sbjct: 461 SKGISRF---TREDPTFRVHFD---TESK--ETI--ISGMGELHLEIYSQRMERE-YSCP 509
Query: 1301 --VSRPRVIFK-TLNGELYEPYE 1320
+ +P+V F+ TL + P+E
Sbjct: 510 CVMGKPKVAFRETLTSAV--PFE 530
Score = 51 (23.0 bits), Expect = 1.6e-18, Sum P(4) = 1.6e-18
Identities = 19/88 (21%), Positives = 34/88 (38%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
+ EP ++ + QG ++ +N R G + + L IP + G+ E
Sbjct: 639 ILEPVMSVEIVAPNEFQGAVIAGVNRRHGVISGQD-GADGYFTLYADIPLNDMFGYATEL 697
Query: 1375 ITLTRGTGLISHVFEEYAPFYNKSKYDL 1402
+ T G G + + Y P + DL
Sbjct: 698 RSCTEGKGEYTMEYSRYQPCAASVQEDL 725
Score = 45 (20.9 bits), Expect = 1.4e-09, Sum P(5) = 1.4e-09
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 58 NKNITAESLVRAPIVTIMGHVDHGKTSLLDYI 89
+ IT +R + I H+D GKT+L + +
Sbjct: 32 SNGITPNERIRN--IGISAHIDSGKTTLTERV 61
Score = 41 (19.5 bits), Expect = 1.4e-09, Sum P(5) = 1.4e-09
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 1029 VTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFD 1063
V R +K F P++V + + +P ++DA +
Sbjct: 278 VRRATVKRSFSPVLVGSALKNKGVQP--LLDAVLE 310
Score = 40 (19.1 bits), Expect = 1.6e-18, Sum P(4) = 1.6e-18
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 1102 PLFEAILKYVP 1112
PL +A+L+Y+P
Sbjct: 303 PLLDAVLEYLP 313
>UNIPROTKB|F1RID1 [details] [associations]
symbol:EFTUD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR000795 InterPro:IPR005225
Pfam:PF00009 PRINTS:PR00315 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0043022 GO:GO:0042256
GeneTree:ENSGT00550000074806 EMBL:CU466453
Ensembl:ENSSSCT00000002008 OMA:VIVCISK Uniprot:F1RID1
Length = 493
Score = 264 (98.0 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 56/127 (44%), Positives = 77/127 (60%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY---- 982
++AHVDHGKTTL D L+ +G R MDS E E+ RGIT+ S S+ Y
Sbjct: 24 VLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSREDEQIRGITMKSSAISLHYAKDD 83
Query: 983 NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
IN+ID+PGH DF EV + + D ++++DAVEG PQT+ V R+A +P++
Sbjct: 84 EEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVL 143
Query: 1043 VVNKIDR 1049
V+NKIDR
Sbjct: 144 VINKIDR 150
Score = 122 (48.0 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ + ++ D ++VV A +GV PQT+ + A + + ++ INK
Sbjct: 88 INLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVLVINK 147
Query: 178 IDKLDINLDRIKQDLIS 194
ID+L + L Q+ S
Sbjct: 148 IDRLIVELKFTPQEAYS 164
Score = 70 (29.7 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 53 LLNEYNKNITAE-SLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFS 97
+LN +K I + + + ++ HVDHGKT+L D + +N + S
Sbjct: 2 VLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIIS 47
Score = 41 (19.5 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 1098 GNMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIM 1157
GN+ L++A+LK D L L+I + E K+ I I S + Q V+ M
Sbjct: 299 GNIWSLYDAVLKKDKEKIDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISQAVLAM 358
>SGD|S000000033 [details] [associations]
symbol:FUN12 "GTPase required for general translation
initiation" species:4932 "Saccharomyces cerevisiae" [GO:0003924
"GTPase activity" evidence=IEA;ISS;IDA;IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0003743 "translation initiation
factor activity" evidence=IEA;IDA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0006446 "regulation of translational initiation" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA;IDA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS01176 SGD:S000000033 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 EMBL:BK006935 GO:GO:0006446
GO:GO:0003924 GO:GO:0043022 EMBL:U12980 GO:GO:0003743
InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0000462 GO:GO:0022627
eggNOG:COG0532 Gene3D:3.40.50.10050 InterPro:IPR015760
InterPro:IPR023115 PANTHER:PTHR23115:SF41 Pfam:PF11987
SUPFAM:SSF52156 KO:K03243 OMA:TRNANIR HOGENOM:HOG000105770
GeneTree:ENSGT00690000102102 OrthoDB:EOG40311D EMBL:L29389
PIR:S70292 RefSeq:NP_009365.1 ProteinModelPortal:P39730 SMR:P39730
DIP:DIP-3790N IntAct:P39730 MINT:MINT-508011 STRING:P39730
PaxDb:P39730 PeptideAtlas:P39730 EnsemblFungi:YAL035W GeneID:851196
KEGG:sce:YAL035W CYGD:YAL035w NextBio:968046 Genevestigator:P39730
GermOnline:YAL035W Uniprot:P39730
Length = 1002
Score = 141 (54.7 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 67 VRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGA 108
+R+PI I+GHVD GKT LLD IR+TNV EAGGITQ IGA
Sbjct: 403 LRSPICCILGHVDTGKTKLLDKIRQTNVQGGEAGGITQQIGA 444
Score = 136 (52.9 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 26/61 (42%), Positives = 42/61 (68%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGHE+F+ +R+RG+ + +I +LV+ G+ QT E+I + P +VA+NKID+
Sbjct: 475 IDTPGHESFSNLRSRGSSLCNIAILVIDIMHGLEQQTIESIKLLRDRKAPFVVALNKIDR 534
Query: 181 L 181
L
Sbjct: 535 L 535
Score = 94 (38.1 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 83/382 (21%), Positives = 156/382 (40%)
Query: 183 INLDRIKQDLISEQVIPEEYGGASPFISI---SAKTGVGINKLLENI-SLQAEILELKAP 238
I L+ +Q L SE + S ++SI SA TG G+ LL + L + + +
Sbjct: 568 IQLELAEQGLNSELYFQNK--NMSKYVSIVPTSAVTGEGVPDLLWLLLELTQKRMSKQLM 625
Query: 239 VTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD-IVVAGAS---YGRIRSMLNENGKN 294
+ + I+E ++ +G G V++ +G LR D IV+ G + IR++L
Sbjct: 626 YLSHVEATILEVKVVEGFGTTIDVILSNGYLREGDRIVLCGMNGPIVTNIRALLTPQPLR 685
Query: 295 ILEAGPSIP--VEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGKFRDV-KLSKQKLHK 351
L E++ V + +L EK L G D +L +
Sbjct: 686 ELRLKSEYVHHKEVKAALGVKIAANDL-----EKAVSGSRLLVVGPEDDEDELMDDVMDD 740
Query: 352 TENMFNDINKEKVKNLLIIIKTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGNINESDI 411
+ + ++ K ++++ GS E L + LK++ KI V+ +G + + D+
Sbjct: 741 LTGLLDSVDTTG-KG--VVVQASTLGSLEALLDFLKDM-----KIPVMSIGLGPVYKRDV 792
Query: 412 NLA--IASKA----IIIGFNVRADASTRKLAQXXXXXXXXXXXXXXXXKEIKSEITNLIP 465
A + KA +++ F+V+ D + A+ + L+
Sbjct: 793 MKASTMLEKAPEYAVMLCFDVKVDKEAEQYAEQEGIKIFNADVIYHLFDSFTAYQEKLLE 852
Query: 466 LEKKENLLGLAEIRQVI----LVNKVSK-IAGCYILEGLIRRDSKIRILRN------KNI 514
E++++ L A V+ ++NK I G +LEG +R + I ++ +
Sbjct: 853 -ERRKDFLDYAIFPCVLQTLQIINKRGPMIIGVDVLEGTLRVGTPICAVKTDPTTKERQT 911
Query: 515 IWTGELDSLKRFKDNVKEVKAG 536
+ G++ SL+ V+EVK G
Sbjct: 912 LILGKVISLEINHQPVQEVKKG 933
Score = 38 (18.4 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 13/59 (22%), Positives = 21/59 (35%)
Query: 685 YLLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSEADKYYEAIIHLGITTETGDIE 743
YL ++ G P T + L + + SE + E LG+ D+E
Sbjct: 655 YLREGDRIVLCGMNGPIVTNIRALLTPQPLRELRLKSEYVHHKEVKAALGVKIAANDLE 713
>MGI|MGI:2444783 [details] [associations]
symbol:Gfm2 "G elongation factor, mitochondrial 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006412 "translation" evidence=IEA] [GO:0032543 "mitochondrial
translation" evidence=ISO] [GO:0032790 "ribosome disassembly"
evidence=ISO] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889
InterPro:IPR000640 Pfam:PF00679 MGI:MGI:2444783 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0003924 GO:GO:0032543
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 GO:GO:0032790 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585 KO:K02355
OMA:EEYTGGI CTD:84340 GeneTree:ENSGT00550000074890
OrthoDB:EOG4NKBV3 ChiTaRS:GFM2 EMBL:AK044371 EMBL:BC027341
EMBL:BC138233 EMBL:BC145208 IPI:IPI00269240 IPI:IPI00338876
IPI:IPI00928146 RefSeq:NP_001139515.1 RefSeq:NP_001258392.1
RefSeq:NP_001258393.1 RefSeq:NP_001258394.1 RefSeq:NP_796240.3
UniGene:Mm.219675 ProteinModelPortal:Q8R2Q4 SMR:Q8R2Q4
STRING:Q8R2Q4 PhosphoSite:Q8R2Q4 PaxDb:Q8R2Q4 PRIDE:Q8R2Q4
Ensembl:ENSMUST00000022170 Ensembl:ENSMUST00000042084
Ensembl:ENSMUST00000161639 GeneID:320806 KEGG:mmu:320806
UCSC:uc007rnu.2 UCSC:uc011zdh.1 UCSC:uc011zdi.1 InParanoid:B2RR55
NextBio:397475 Bgee:Q8R2Q4 CleanEx:MM_GFM2 Genevestigator:Q8R2Q4
GermOnline:ENSMUSG00000021666 Uniprot:Q8R2Q4
Length = 779
Score = 233 (87.1 bits), Expect = 2.6e-18, Sum P(4) = 2.6e-18
Identities = 60/172 (34%), Positives = 93/172 (54%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH+D GKTT + +L SG R +++ + D E+ERGITI S ++++ G
Sbjct: 75 IMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTLDWKG 134
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
R+N+IDTPGH DF EVER L ++D + + DA G QT V R+A K I +
Sbjct: 135 YRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKIPRICFL 194
Query: 1045 NKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKAR 1096
NK+D++ A + V++ + +KL A L P+ G + +K +
Sbjct: 195 NKMDKTGASFNYAVES---IREKLKAKPLILQLPIGEARTFQGVVDVVNKEK 243
Score = 102 (41.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 34/106 (32%), Positives = 46/106 (43%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G VD G T + D++ + GIT A + + +DTPGH FT
Sbjct: 100 LGDVDDGDT-VTDFMAQ-----ERERGITIQSAAVTLDWKGYRVNLIDTPGHVDFTLEVE 153
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
R +V D V V A GV QT A +P I +NK+DK
Sbjct: 154 RCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKIPRICFLNKMDK 199
Score = 75 (31.5 bits), Expect = 2.6e-18, Sum P(4) = 2.6e-18
Identities = 22/101 (21%), Positives = 46/101 (45%)
Query: 1309 KTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI 1368
K + ++ EP +L V + ++ L R G+++ I+ + RV L + +P ++
Sbjct: 676 KKADKQVLEPLMSLEVTVSREYLSPVLADLAQRRGNIQEIQTRQDNRVVLGF-VPLAEIM 734
Query: 1369 GFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRRNGV 1409
G+ TLT G+ + Y + + L +R+G+
Sbjct: 735 GYSTVLRTLTSGSATFALELSTYQAMSPQDQSALLNQRSGL 775
Score = 54 (24.1 bits), Expect = 2.6e-18, Sum P(4) = 2.6e-18
Identities = 62/273 (22%), Positives = 111/273 (40%)
Query: 1062 FDLF--DKLCATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSN 1119
FDL +KL A ++ L G A +N K Q PL +A+ Y+P ++ +
Sbjct: 303 FDLVPAEKLQAAVHRVTLAQAAVPVLCGSALKN-KGVQ----PLLDAVTTYLPSPEERED 357
Query: 1120 NPLQL---QIISLEYS----SYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQI 1172
LQ + +L + G + RI SG + V +N + +++++
Sbjct: 358 RFLQWYEGDLCALAFKVLHDKQRGPLVFLRIYSGTLTPQLAVHNIN----RNCTERMSRL 413
Query: 1173 RVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNI---DEPTLTINF 1229
+ V + +G+I L G+++ G TI SK + L E
Sbjct: 414 LLPFADQHVEIPSLTAGNIALTVGLKQTATGDTIVS-SKSSALAAARRAGRGEREHGKKR 472
Query: 1230 MVNNSPLAG---REGKFITTRQ---IKNR--LDHEI----KNNIGLRVTQNKHDDSIYEV 1277
+ LAG E F T + + + LDH + + + L+V + D +
Sbjct: 473 EAESLLLAGVEVPEPVFFCTIEPPSVAKQPDLDHALERLQREDPSLKVKLDP-DSGQTVL 531
Query: 1278 SGRGELHLTILIENMRRE-GYELSVSRPRVIFK 1309
G GELH+ I+ + ++RE G E + +V ++
Sbjct: 532 CGMGELHIEIIHDRIKREYGLETYLGPLQVAYR 564
Score = 44 (20.5 bits), Expect = 2.6e-18, Sum P(4) = 2.6e-18
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 72 VTIMGHVDHGKTSLLDYI 89
+ IM H+D GKT+ + I
Sbjct: 73 IGIMAHIDAGKTTTTERI 90
Score = 41 (19.5 bits), Expect = 5.3e-17, Sum P(4) = 5.3e-17
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 1135 LGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKI-NQIRVFKGLDRVL 1182
+G++ I I+ RIK + GP + I N +R LDRVL
Sbjct: 534 MGELHI-EIIHDRIKREYGLETYLGPLQVAYRETILNSVRATDTLDRVL 581
>ASPGD|ASPL0000014795 [details] [associations]
symbol:AN3832 species:162425 "Emericella nidulans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003746 "translation
elongation factor activity" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=IEA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PROSITE:PS00301 SMART:SM00889 UniPathway:UPA00345
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0003924 GO:GO:0006184 EMBL:BN001302
GO:GO:0003746 GO:GO:0032543 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AACD01000062
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
HOGENOM:HOG000231585 KO:K02355 TIGRFAMs:TIGR00484 OMA:QEPGKGY
HSSP:P13551 RefSeq:XP_661436.1 ProteinModelPortal:Q5B6J8
STRING:Q5B6J8 EnsemblFungi:CADANIAT00004875 GeneID:2873256
KEGG:ani:AN3832.2 OrthoDB:EOG4VT95B Uniprot:Q5B6J8
Length = 799
Score = 201 (75.8 bits), Expect = 3.1e-18, Sum P(4) = 3.1e-18
Identities = 54/147 (36%), Positives = 78/147 (53%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARI-----MDSNEIEKERGITIFSKNCSIE 981
I AH+D GKTT + +L +G + + R MDS ++E+E+GITI S +
Sbjct: 104 IAAHIDSGKTTCTERVLFYTGRIKAIHEVRGRDSVGAKMDSMDLEREKGITIQSAATFCD 163
Query: 982 Y-----NGTR----INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRK 1032
+ +G +N+IDTPGH DF EVER L ++D ++++ AV G QT V R+
Sbjct: 164 WVKKDEDGKEQKYHMNLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQ 223
Query: 1033 ALKLGFKPIVVVNKIDRSNARPEWVVD 1059
+ I VNK+DR A P VD
Sbjct: 224 MRRYNVPRISFVNKMDRMGANPFKSVD 250
Score = 119 (46.9 bits), Expect = 7.1e-11, Sum P(4) = 7.1e-11
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH FT R +V D V+++ A GV QT + VP I +NK
Sbjct: 178 MNLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNK 237
Query: 178 IDKLDIN----LDRI--KQDLISEQV-IP----EEYGGASPFISISAKTGVGINKLLENI 226
+D++ N +D+I K L + V +P +E+ G + + A G N ENI
Sbjct: 238 MDRMGANPFKSVDQINTKLKLPAAAVQVPIGAEDEFEGVVDLVRMKAIYNQGSNG--ENI 295
Query: 227 SLQAEILELKAPVTTPAKGVIIESRLD 253
++ EI E + + ++IE+ D
Sbjct: 296 VVKDEIPEKVRELAEERRRMLIETLAD 322
Score = 103 (41.3 bits), Expect = 3.1e-18, Sum P(4) = 3.1e-18
Identities = 48/191 (25%), Positives = 83/191 (43%)
Query: 1121 PLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDR 1180
PL LE SS+ G++ R+ G ++ + + N DK K +I +I +
Sbjct: 409 PLVCLAFKLEESSF-GQLTYIRVYQGTLR--KGSYVFNARTDK--KVRIPRIVRMHSNEM 463
Query: 1181 VLVNEALSGDIVLITGIEEICI-GSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGR 1239
V+E +G+I + G+E C G + D + + + EP ++++ +S
Sbjct: 464 EDVSEIGAGEICAVFGVE--CASGDSFTDGQLGYTMSSMFVPEPVISLSIKPKHSKDYAN 521
Query: 1240 EGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE-GYE 1298
K + Q R D RV+ + + +SG GELHL I +E MRRE +
Sbjct: 522 FSKAMARFQ---REDPTF------RVSFDPESEQTL-ISGMGELHLDIYVERMRREYRVD 571
Query: 1299 LSVSRPRVIFK 1309
P+V ++
Sbjct: 572 CETGPPQVAYR 582
Score = 67 (28.6 bits), Expect = 3.1e-18, Sum P(4) = 3.1e-18
Identities = 25/102 (24%), Positives = 42/102 (41%)
Query: 1305 RVIFKTLNGELYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKE-RVRLEYRIP 1363
R F+ N + EP V QG ++ LN RG + + E+ E V + +
Sbjct: 689 RKAFQEGNPAVLEPMMKTVVTAPAEFQGDVIGLLNKRGATINDSEVGVDEFTVYADCSL- 747
Query: 1364 SRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKR 1405
G+ GF + T+G G + F Y + + +L K+
Sbjct: 748 -NGMFGFSSHLRAATQGKGEYTMEFSHYEKAPPQEQRELVKK 788
Score = 50 (22.7 bits), Expect = 7.1e-11, Sum P(4) = 7.1e-11
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYI 89
+ AE L R + I H+D GKT+ + +
Sbjct: 91 VEAERLSRVRNIGIAAHIDSGKTTCTERV 119
Score = 37 (18.1 bits), Expect = 3.1e-18, Sum P(4) = 3.1e-18
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 538 ECERLSRIEN 547
E ERLSR+ N
Sbjct: 92 EAERLSRVRN 101
>UNIPROTKB|Q0C5X0 [details] [associations]
symbol:lepA "Elongation factor 4" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR006297 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 EMBL:CP000158 GenomeReviews:CP000158_GR
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0481
HOGENOM:HOG000020624 InterPro:IPR013842 PANTHER:PTHR23115:SF40
Pfam:PF06421 TIGRFAMs:TIGR01393 OMA:KCYGGDA KO:K03596
ProtClustDB:PRK05433 RefSeq:YP_758873.1 ProteinModelPortal:Q0C5X0
SMR:Q0C5X0 STRING:Q0C5X0 GeneID:4288718 KEGG:hne:HNE_0139
PATRIC:32213064 BioCyc:HNEP228405:GI69-186-MONOMER Uniprot:Q0C5X0
Length = 604
Score = 254 (94.5 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 71/237 (29%), Positives = 118/237 (49%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGT 985
+IIAH+DHGK+TL D L++ G ++ ++ +++DS +IEKERGITI ++ + Y +
Sbjct: 14 SIIAHIDHGKSTLADRLIQACGGLT-DREMSEQVLDSMDIEKERGITIKAQTVRLSYTAS 72
Query: 986 -----RINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKP 1040
+N++DTPGH DF EV R L+ + LL++DA +G QT +A+ +
Sbjct: 73 DGETYTLNLMDTPGHVDFAYEVSRCLAACEGSLLVVDASQGVEAQTLANVYQAIDQNHEI 132
Query: 1041 IVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLDFPVIYTSALHGYANENSKARQGNM 1100
+ V+NKID P VD + +++ + + SA G + N
Sbjct: 133 VPVLNKIDL----PAADVDRVKEQIEEIIGLDAS---DAVQISAKTGLGIPDVLEAIVNR 185
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIM 1157
+P P + PL+ ++ Y YLG + I R+ G +K Q + +M
Sbjct: 186 LP---------PPRGGDHTAPLKAALVDAYYDPYLGVVVIVRVHEGILKKKQTIRMM 233
Score = 154 (59.3 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 49/158 (31%), Positives = 77/158 (48%)
Query: 117 SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
++ +DTPGH F +R + +LVV A GV QT + A ++ +N
Sbjct: 78 TLNLMDTPGHVDFAYEVSRCLAACEGSLLVVDASQGVEAQTLANVYQAIDQNHEIVPVLN 137
Query: 177 KIDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELK 236
KID ++DR+K+ + E++I + AS + ISAKTG+GI +LE I + L
Sbjct: 138 KIDLPAADVDRVKEQI--EEIIGLD---ASDAVQISAKTGLGIPDVLEAI-----VNRLP 187
Query: 237 APV----TTPAKGVIIESRLDKGKGPVATVLIQSGTLR 270
P T P K ++++ D G V V + G L+
Sbjct: 188 PPRGGDHTAPLKAALVDAYYDPYLGVVVIVRVHEGILK 225
Score = 54 (24.1 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 27/102 (26%), Positives = 46/102 (45%)
Query: 1281 GELHLTILIENMRRE-GYELSVSRPRVIFKT--LNG---ELYEPYENL-FVDIEEINQGI 1333
G LHL I+ E + RE +L + P V+++ +G EL+ P + V I EI +
Sbjct: 351 GLLHLEIIQERLSREFDLDLIATAPSVVYEMSMTDGTEIELHNPADMPDVVRITEIREPW 410
Query: 1334 IMQKL----NYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQ 1371
I + Y G LK + ++ L Y + R + ++
Sbjct: 411 IAATIYTPDEYLGSILKLCQDRRGIQIELSY-VGGRACVKYE 451
Score = 47 (21.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 1169 INQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSK 1211
+ ++ + G + L N A D+V IT I E I +TI P +
Sbjct: 378 VYEMSMTDGTEIELHNPADMPDVVRITEIREPWIAATIYTPDE 420
Score = 45 (20.9 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 497 EGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKA 535
EG++++ IR++R + E+D + F + E A
Sbjct: 221 EGILKKKQTIRMMRTGGVY---EIDKVGTFNPKLTEADA 256
>CGD|CAL0002600 [details] [associations]
symbol:PUS4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0009982 "pseudouridine synthase activity" evidence=IEA]
[GO:0006400 "tRNA modification" evidence=IEA] HAMAP:MF_01080
InterPro:IPR002501 InterPro:IPR014780 InterPro:IPR020103
Pfam:PF01509 CGD:CAL0002600 GO:GO:0003723 GO:GO:0006396
EMBL:AACQ01000081 GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120
KO:K03177 PANTHER:PTHR13767 RefSeq:XP_715717.1
ProteinModelPortal:Q5A1U9 STRING:Q5A1U9 GeneID:3642661
KEGG:cal:CaO19.1954 Uniprot:Q5A1U9
Length = 394
Score = 236 (88.1 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 55/118 (46%), Positives = 74/118 (62%)
Query: 681 KKI-KYLLNAK-KVGYTGTLDPFATGLLPLCFGEATK-FSNYLSEADKYYEAIIHLGITT 737
+KI K + + K K+G+ GTLDP A+G+L + G TK YL+E K YE LGI+T
Sbjct: 64 QKIEKKIASTKVKIGHGGTLDPLASGILVVGVGLGTKKLQYYLAECQKTYETKALLGIST 123
Query: 738 ETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALKYKGIPLYKYARSG 795
TGD EG+I+ NK + E+I+ + F G I Q PP++SALK G PLY+YAR G
Sbjct: 124 TTGDSEGEIVSKNKIDHITSELIDSTVEKFIGDIKQTPPIFSALKVNGKPLYEYARKG 181
Score = 63 (27.2 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 827 SKGTYIRVLSEDIGKMLGCGAHLKYLRRIGIDKLTLDKCLNIDTIIKYSEYER 879
S GTYIR L DIG+ + A++ L R + L K + K+ ++E+
Sbjct: 286 SSGTYIRSLISDIGRAMESSAYMVELIRTKQSEWELGK-----NVFKFEDFEK 333
Score = 39 (18.8 bits), Expect = 3.7e-18, Sum P(3) = 3.7e-18
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 659 KNI-IHGVLLLDKPYGLSSNNALKKIK 684
K+I ++GV + KP G++S +++I+
Sbjct: 5 KSIKMNGVFAVYKPSGITSAKFIERIQ 31
>CGD|CAL0000430 [details] [associations]
symbol:MEF2 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0006412 GO:GO:0003924
GO:GO:0006184 Gene3D:3.30.70.240 EMBL:AACQ01000038
EMBL:AACQ01000037 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
KO:K02355 HSSP:Q5SHN5 RefSeq:XP_718715.1 RefSeq:XP_718798.1
ProteinModelPortal:Q5AAV3 STRING:Q5AAV3 GeneID:3639564
GeneID:3639639 KEGG:cal:CaO19.13589 KEGG:cal:CaO19.6208
CGD:CAL0068067 Uniprot:Q5AAV3
Length = 807
Score = 243 (90.6 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 55/128 (42%), Positives = 78/128 (60%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
IIAH+D GKTT + ++ SG ++ N++ + D E+ERGITI S ++ +N
Sbjct: 34 IIAHIDAGKTTTTERMIYYSGRTKRIGNVDEGDTVTDYLPSERERGITIQSAAITLPWNQ 93
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
+INIIDTPGHADF EV R L ++D + ++DAV G QT V ++A L +V V
Sbjct: 94 HKINIIDTPGHADFTFEVIRSLRVLDGAVTILDAVAGVEAQTEKVWKQASALNLPKVVYV 153
Query: 1045 NKIDRSNA 1052
NK+DR A
Sbjct: 154 NKMDRPGA 161
Score = 138 (53.6 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 38/121 (31%), Positives = 56/121 (46%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G+VD G T + DY+ GIT A + N I +DTPGH FT
Sbjct: 59 IGNVDEGDT-VTDYLPS-----ERERGITIQSAAITLPWNQHKINIIDTPGHADFTFEVI 112
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLIS 194
R +V D V ++ A GV QT + A +P +V +NK+D+ R Q++I
Sbjct: 113 RSLRVLDGAVTILDAVAGVEAQTEKVWKQASALNLPKVVYVNKMDRPGAGFSRTVQEVIQ 172
Query: 195 E 195
+
Sbjct: 173 K 173
Score = 75 (31.5 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 47/186 (25%), Positives = 80/186 (43%)
Query: 1117 NSNN-PLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVF 1175
N NN L L + +S+ G + R+ SG++ + +++ N K K I ++ V
Sbjct: 343 NDNNLTLALAFKVMTHSTR-GPMTFVRVYSGKLNAASNLI--NTRTGK--KLLIRKLLVM 397
Query: 1176 KGLDRVLVNEALSGDIVLITGIE-EICIGSTICDPS--------KPNGLPMLNIDEPTLT 1226
G V +G+I +I G E + G T+ + K + +L ID P
Sbjct: 398 HGDSPEEVKSISAGNIGVIPGYETDFQTGDTLVSSAVAKRNFTAKDSAYRLLPIDIPPPL 457
Query: 1227 INFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLT 1286
N + AG E +K ++ I+ + L+V +K + +SG GELHL
Sbjct: 458 FNAAIEPHT-AGDEA------YMKQCVETLIREDPSLKVHLDKEMGQVV-LSGMGELHLD 509
Query: 1287 ILIENM 1292
I+ E +
Sbjct: 510 IVRERL 515
Score = 41 (19.5 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 54 LNEYNKNITAESLVRAPIVTIMGHVDHGKTS 84
L+ + + + + + I+ H+D GKT+
Sbjct: 14 LSRFYSTVNSIGAAKTRNIGIIAHIDAGKTT 44
>UNIPROTKB|Q5AAV3 [details] [associations]
symbol:MEF2 "Ribosome-releasing factor 2, mitochondrial"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 Gene3D:3.30.70.240 EMBL:AACQ01000038
EMBL:AACQ01000037 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480
KO:K02355 HSSP:Q5SHN5 RefSeq:XP_718715.1 RefSeq:XP_718798.1
ProteinModelPortal:Q5AAV3 STRING:Q5AAV3 GeneID:3639564
GeneID:3639639 KEGG:cal:CaO19.13589 KEGG:cal:CaO19.6208
CGD:CAL0068067 Uniprot:Q5AAV3
Length = 807
Score = 243 (90.6 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 55/128 (42%), Positives = 78/128 (60%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
IIAH+D GKTT + ++ SG ++ N++ + D E+ERGITI S ++ +N
Sbjct: 34 IIAHIDAGKTTTTERMIYYSGRTKRIGNVDEGDTVTDYLPSERERGITIQSAAITLPWNQ 93
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
+INIIDTPGHADF EV R L ++D + ++DAV G QT V ++A L +V V
Sbjct: 94 HKINIIDTPGHADFTFEVIRSLRVLDGAVTILDAVAGVEAQTEKVWKQASALNLPKVVYV 153
Query: 1045 NKIDRSNA 1052
NK+DR A
Sbjct: 154 NKMDRPGA 161
Score = 138 (53.6 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 38/121 (31%), Positives = 56/121 (46%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITFLDTPGHEAFTAMRA 134
+G+VD G T + DY+ GIT A + N I +DTPGH FT
Sbjct: 59 IGNVDEGDT-VTDYLPS-----ERERGITIQSAAITLPWNQHKINIIDTPGHADFTFEVI 112
Query: 135 RGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLIS 194
R +V D V ++ A GV QT + A +P +V +NK+D+ R Q++I
Sbjct: 113 RSLRVLDGAVTILDAVAGVEAQTEKVWKQASALNLPKVVYVNKMDRPGAGFSRTVQEVIQ 172
Query: 195 E 195
+
Sbjct: 173 K 173
Score = 75 (31.5 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 47/186 (25%), Positives = 80/186 (43%)
Query: 1117 NSNN-PLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVF 1175
N NN L L + +S+ G + R+ SG++ + +++ N K K I ++ V
Sbjct: 343 NDNNLTLALAFKVMTHSTR-GPMTFVRVYSGKLNAASNLI--NTRTGK--KLLIRKLLVM 397
Query: 1176 KGLDRVLVNEALSGDIVLITGIE-EICIGSTICDPS--------KPNGLPMLNIDEPTLT 1226
G V +G+I +I G E + G T+ + K + +L ID P
Sbjct: 398 HGDSPEEVKSISAGNIGVIPGYETDFQTGDTLVSSAVAKRNFTAKDSAYRLLPIDIPPPL 457
Query: 1227 INFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLT 1286
N + AG E +K ++ I+ + L+V +K + +SG GELHL
Sbjct: 458 FNAAIEPHT-AGDEA------YMKQCVETLIREDPSLKVHLDKEMGQVV-LSGMGELHLD 509
Query: 1287 ILIENM 1292
I+ E +
Sbjct: 510 IVRERL 515
Score = 41 (19.5 bits), Expect = 5.6e-18, Sum P(3) = 5.6e-18
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 54 LNEYNKNITAESLVRAPIVTIMGHVDHGKTS 84
L+ + + + + + I+ H+D GKT+
Sbjct: 14 LSRFYSTVNSIGAAKTRNIGIIAHIDAGKTT 44
>CGD|CAL0005131 [details] [associations]
symbol:TUF1 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=IEA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR000795 InterPro:IPR004160 InterPro:IPR004161
InterPro:IPR004541 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03143
Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301 CGD:CAL0005131
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 GO:GO:0003746 EMBL:AACQ01000036 EMBL:AACQ01000035
InterPro:IPR009001 InterPro:IPR009000 SUPFAM:SSF50465
SUPFAM:SSF50447 KO:K02358 TIGRFAMs:TIGR00485 HAMAP:MF_00118_B
PANTHER:PTHR23115:SF31 RefSeq:XP_718907.1 RefSeq:XP_719009.1
ProteinModelPortal:Q5ABC3 SMR:Q5ABC3 STRING:Q5ABC3 GeneID:3639360
GeneID:3639485 KEGG:cal:CaO19.13468 KEGG:cal:CaO19.6047
Uniprot:Q5ABC3
Length = 426
Score = 250 (93.1 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 85/292 (29%), Positives = 144/292 (49%)
Query: 928 IAHVDHGKTTL---IDHLLRQSGTFRKNQN-INARIMDSNEIEKERGITIFSKNCSIEYN 983
I HVDHGKTTL I +L + G N ++ +D E+ RGITI + + E
Sbjct: 42 IGHVDHGKTTLTAAITKVLAEQG----GANFLDYGSIDRAPEERARGITISTAHVEYETK 97
Query: 984 GTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVV 1043
+D PGHAD+ + + +D ++++ A +G MPQTR A ++G + +VV
Sbjct: 98 NRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGQMPQTREHLLLARQVGVQDLVV 157
Query: 1044 -VNKIDRSNARPEWVVDATFDLFDKLCATEEQLD-FPVIYTSALHGYANENSKARQGNMI 1101
VNK+D + PE + ++ + L D PVI SAL ++ + + ++
Sbjct: 158 FVNKVDTIDD-PEMLELVEMEMRELLSTYGFDGDNTPVIMGSALMALEDKKPEIGKEAIL 216
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPD 1161
L +A+ +++P + P L + + S G + GR+ G +K +++ I+ G
Sbjct: 217 KLLDAVDEHIPTPSRDLEQPFLLPVEDVFSISGRGTVVTGRVERGVLKKGEEIEIVGG-F 275
Query: 1162 DKPNKAKINQIRVFKGLDRVLVNEALSGDI--VLITGI--EEICIGSTICDP 1209
DKP K + I +FK + L + A++GD VL+ G+ +EI G + P
Sbjct: 276 DKPYKTTVTGIEMFK---KEL-DSAMAGDNCGVLLRGVKRDEIKRGMVLAKP 323
Score = 163 (62.4 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 71/237 (29%), Positives = 105/237 (44%)
Query: 75 MGHVDHGKTSL----------------LDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSI 118
+GHVDHGKT+L LDY A GIT T +
Sbjct: 42 IGHVDHGKTTLTAAITKVLAEQGGANFLDYGSIDRAPEERARGITISTAHVEYETKNRHY 101
Query: 119 TFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP-LIVAINK 177
+D PGH + GA D ++VVAA DG MPQTRE + A+ GV L+V +NK
Sbjct: 102 AHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGQMPQTREHLLLARQVGVQDLVVFVNK 161
Query: 178 IDKLDIN--LDRIKQDLISEQVIPEEYGGAS-PFISISA-------KTGVG---INKLLE 224
+D +D L+ ++ ++ E + + G + P I SA K +G I KLL+
Sbjct: 162 VDTIDDPEMLELVEMEM-RELLSTYGFDGDNTPVIMGSALMALEDKKPEIGKEAILKLLD 220
Query: 225 NIS--LQAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSD-IVVAG 278
+ + +L+ P P + V S G+G V T ++ G L+ + I + G
Sbjct: 221 AVDEHIPTPSRDLEQPFLLPVEDVFSIS----GRGTVVTGRVERGVLKKGEEIEIVG 273
Score = 53 (23.7 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 28/116 (24%), Positives = 50/116 (43%)
Query: 657 KNKNIIHGVLLLDKPYGLSSNNALKKIKYLLNAKKVGYTGTLDPFATGLLPLCFGEATKF 716
K I G++L KP +S+ Y+L +++ G + PF G P CF
Sbjct: 310 KRDEIKRGMVLA-KPGTATSHKKFLASLYILTSEEGGRS---TPFGEGYKPQCFFRTNDV 365
Query: 717 SNYLSEADKYYEAIIHLGITTETGDIE--GKIIDFNKNIPNSIEIIEKILINFHGK 770
+ S + E + H + +IE G++I K+ P +E+ ++ + GK
Sbjct: 366 TTTFSFPEG--EGVDHSQMIMPGDNIEMVGELI---KSCP--LEVNQRFNLREGGK 414
>ZFIN|ZDB-GENE-080723-73 [details] [associations]
symbol:trub1 "TruB pseudouridine (psi) synthase
homolog 1 (E. coli)" species:7955 "Danio rerio" [GO:0003723 "RNA
binding" evidence=IEA] [GO:0009451 "RNA modification" evidence=IEA]
[GO:0001522 "pseudouridine synthesis" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_01080 InterPro:IPR002501 InterPro:IPR014780
InterPro:IPR020103 Pfam:PF01509 ZFIN:ZDB-GENE-080723-73
GO:GO:0003723 GO:GO:0006396 eggNOG:COG0130 GO:GO:0009982
GO:GO:0001522 SUPFAM:SSF55120 KO:K03177 PANTHER:PTHR13767
GeneTree:ENSGT00530000063611 CTD:142940 HOGENOM:HOG000063679
HOVERGEN:HBG094094 OMA:PFFTLDV OrthoDB:EOG4S4PGQ TIGRFAMs:TIGR00431
EMBL:CU464184 EMBL:BC162751 EMBL:BC163177 EMBL:BC163184
IPI:IPI00488585 RefSeq:NP_001122159.1 UniGene:Dr.76382
STRING:B3DHG0 Ensembl:ENSDART00000075889 GeneID:556642
KEGG:dre:556642 NextBio:20881584 Uniprot:B3DHG0
Length = 290
Score = 230 (86.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 71/240 (29%), Positives = 112/240 (46%)
Query: 632 NSIENAMMISKLIDGIKYCMQFHIKKNK------NIIHGVLLLDKPYGLSSNNALKKIKY 685
++++N+ + SKL + H KK NI+ LL K G+++ N K+ +
Sbjct: 5 STVQNSSL-SKL-QSLHGIFAIHKKKGPTSADVLNILKKTLL--KEAGVTNFNPRKRKQP 60
Query: 686 LLNAKKVGYTGTLDPFATGLLPLCFGEATKFSNYLSEADKYYEAIIHLGITTETGDIEGK 745
K+G+ GTLD A+G+L + GE TK + K Y A LG T+T D+ G
Sbjct: 61 F----KIGHGGTLDSNASGVLVVGIGEGTKMLTTMLAGSKKYTAFGELGKATDTLDVTGN 116
Query: 746 IIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALKYKGIPLYKYARSGXXXXXXXXXX 805
+++ + E E+ + F G+I Q+PP+YSALK G + + G
Sbjct: 117 VVEEKSYDHITKEAFEEKMKQFTGEIMQVPPLYSALKKDGKRMSVLLKQGQEVEAKPARP 176
Query: 806 XXXXXXXXXXXXPYL-TLRIHCSKGTYIRVLSEDIGKMLGCGAHLKYLRRIGIDKLTLDK 864
P L T+ + C G Y+R L +D+GK L AH+K L R + TL++
Sbjct: 177 VTVYNLSLEDFSPPLFTIDVECGGGFYVRSLIDDLGKALSSCAHIKELTRTKQGQFTLEE 236
>TIGR_CMR|GSU_1933 [details] [associations]
symbol:GSU_1933 "translation elongation factor G"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR004540 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 SMART:SM00889 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0006184
GO:GO:0005622 GO:GO:0003746 GenomeReviews:AE017180_GR
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
ProtClustDB:PRK12740 HAMAP:MF_00054_B TIGRFAMs:TIGR00484
HOGENOM:HOG000231587 HSSP:P13551 EMBL:AF546867
ProteinModelPortal:Q840M1 PATRIC:22026731 Uniprot:Q840M1
Length = 697
Score = 149 (57.5 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 39/128 (30%), Positives = 64/128 (50%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNIN--ARIMDSNEIEKERGITIFSKNCSIEYNG 984
I+AH GKT+L + +L +G + ++ MD E +R ITI S E+NG
Sbjct: 14 IVAHGGAGKTSLTEAILYTAGMIDRLGRVDDGTSTMDFEPEEIKRKITISSSLDHCEWNG 73
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
++I+DTPG+ +F + + + ++++ A+ G QT V A + I V
Sbjct: 74 HSLHIVDTPGYGNFIADTRACMRALGGCVVILSAISGVKVQTEEVWEWANEFELPRIAFV 133
Query: 1045 NKIDRSNA 1052
NK+DR A
Sbjct: 134 NKMDREYA 141
Score = 129 (50.5 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 44/185 (23%), Positives = 86/185 (46%)
Query: 1112 PVHK-DNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKIN 1170
P+ + + P + Y GKI I R+ SG + S D I N P + + +I
Sbjct: 296 PIERRPEESEPFSALVFKTTSDPYTGKISIFRVYSGVLNS--DSTIYN-PV-RECEERIG 351
Query: 1171 QIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTICDPSKPNGLPMLNIDEPTLTINFM 1230
QI +G + + +A++GDIV + ++E G T+CD P I EP + +
Sbjct: 352 QIYELEGKKQKPIKQAVAGDIVAVAKLKETLTGDTLCDKDHPI------IYEPAKPLQPV 405
Query: 1231 VNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIE 1290
++ + + +I L ++ + ++V +++ + +SG G++HL + IE
Sbjct: 406 ISYAVQPKTKND---EDKIHGALQRLMEEDQTIQVRRDEKTRELI-LSGMGQVHLEVTIE 461
Query: 1291 NMRRE 1295
++R+
Sbjct: 462 KLKRK 466
Score = 92 (37.4 bits), Expect = 3.2e-11, Sum P(4) = 3.2e-11
Identities = 38/136 (27%), Positives = 61/136 (44%)
Query: 60 NITAESLVRAPIVTIMGHVDHGKTSLLDYIR---KTNVVFSEAGGITQHIGAYNVVTNHG 116
++T L A ++ +G VD G TS +D+ K + S + H +N H
Sbjct: 24 SLTEAILYTAGMIDRLGRVDDG-TSTMDFEPEEIKRKITISSS---LDHC-EWN---GH- 74
Query: 117 SITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAIN 176
S+ +DTPG+ F A + V++++A GV QT E A +P I +N
Sbjct: 75 SLHIVDTPGYGNFIADTRACMRALGGCVVILSAISGVKVQTEEVWEWANEFELPRIAFVN 134
Query: 177 KIDKLDINLDRIKQDL 192
K+D+ N R D+
Sbjct: 135 KMDREYANFLRAIDDM 150
Score = 80 (33.2 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 1315 LYEPYENLFVDIEEINQGIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLIGFQNEF 1374
L EP N+ V + E G ++ LN R G + +E ++ + +P ++ + N+
Sbjct: 598 LLEPMMNMKVTVPEETMGDVIGDLNSRRGKVVGVEPKANSQI-IRAVVPMSEVLAYANDL 656
Query: 1375 ITLTRGTGLISHVFEEY 1391
++T GL + F Y
Sbjct: 657 KSMTSDRGLFTMEFSHY 673
Score = 38 (18.4 bits), Expect = 3.2e-11, Sum P(4) = 3.2e-11
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 578 LDYSYAKIFFTTFNKDISIKNILD 601
L Y++ +F + +I ++++LD
Sbjct: 248 LRYTFTPVFCGSATMNIGVRHLLD 271
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 74 IMGHVDHGKTSLLDYIRKTNVVFSEAGGI 102
I+ H GKTSL + I T + G +
Sbjct: 14 IVAHGGAGKTSLTEAILYTAGMIDRLGRV 42
>FB|FBgn0024182 [details] [associations]
symbol:waw "waclaw" species:7227 "Drosophila melanogaster"
[GO:0006412 "translation" evidence=ISS] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0003746 "translation elongation factor
activity" evidence=ISS] [GO:0005525 "GTP binding" evidence=IEA]
HAMAP:MF_00071 InterPro:IPR000795 InterPro:IPR005225
InterPro:IPR006297 Pfam:PF00009 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005743 GO:GO:0006412 EMBL:AE014298 GO:GO:0003924
GO:GO:0006184 HOGENOM:HOG000220179 EMBL:AF017777 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 HSSP:P32324 eggNOG:COG0481 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393
GeneTree:ENSGT00550000074940 OMA:KCYGGDA PIR:T08430
RefSeq:NP_001027089.1 UniGene:Dm.2637 ProteinModelPortal:Q9VRH6
SMR:Q9VRH6 STRING:Q9VRH6 PaxDb:Q9VRH6 EnsemblMetazoa:FBtr0100536
GeneID:3771960 KEGG:dme:Dmel_CG1410 UCSC:CG1410-RA CTD:3771960
FlyBase:FBgn0024182 InParanoid:Q9VRH6 OrthoDB:EOG4VMCWC
PhylomeDB:Q9VRH6 NextBio:851923 Uniprot:Q9VRH6
Length = 696
Score = 255 (94.8 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 59/138 (42%), Positives = 85/138 (61%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSI--EYN 983
+IIAHVDHGK+TL D LL +G +N + +++D+ ++E+ERGIT+ ++ SI +
Sbjct: 103 SIIAHVDHGKSTLADRLLELTGAIARNGGQH-QVLDNLQVERERGITVKAQTASIFHRHK 161
Query: 984 GTR--INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQT--RFVTRKALKLGFK 1039
G +N+IDTPGH DF EV R L+ D V+LL+DA G QT + K +L
Sbjct: 162 GQLYLLNLIDTPGHVDFSNEVSRSLAACDGVVLLVDACHGVQAQTVANYHLAKQRQLAVV 221
Query: 1040 PIVVVNKIDRSNARPEWV 1057
P V+NKID +A P+ V
Sbjct: 222 P--VLNKIDIKHANPDQV 237
Score = 148 (57.2 bits), Expect = 9.3e-06, Sum P(4) = 9.3e-06
Identities = 65/271 (23%), Positives = 123/271 (45%)
Query: 6 SVVIKNLMKLGQMVTINQVLDQETAMILVEEMGHVAHASKLNDPESFLLNEYNKNITAES 65
S++++NL Q + ++ + L+ E H+ ++ + ++ K+ A+
Sbjct: 63 SLLVRNLSTTNQ---VKGETEEPSQADLLREFAHMP-VERIRNFSIIAHVDHGKSTLADR 118
Query: 66 LVRAPIVTIMGHV--DHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNH-GSITFL- 121
L+ + G + + G+ +LD N+ GIT ++ H G + L
Sbjct: 119 LLE-----LTGAIARNGGQHQVLD-----NLQVERERGITVKAQTASIFHRHKGQLYLLN 168
Query: 122 --DTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKID 179
DTPGH F+ +R D VVL+V A GV QT AK + ++ +NKID
Sbjct: 169 LIDTPGHVDFSNEVSRSLAACDGVVLLVDACHGVQAQTVANYHLAKQRQLAVVPVLNKID 228
Query: 180 KLDINLDRIKQDL-ISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKAP 238
N D++ QDL + + P+E + +SAK G G++++LE + +++
Sbjct: 229 IKHANPDQVCQDLKLLFGIDPDEV------LRVSAKLGTGVSEVLERVIETVPPPQVQRD 282
Query: 239 VTTPAKGVIIESRLDKGKGPVATVLIQSGTL 269
+ + +I +S DK +G + + + +G L
Sbjct: 283 --SDFRALIFDSWFDKYRGALNLIYVLNGKL 311
Score = 52 (23.4 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 10/52 (19%), Positives = 27/52 (51%)
Query: 1103 LFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDV 1154
+ E +++ VP + ++ + I + Y G + + +L+G+++ QD+
Sbjct: 266 VLERVIETVPPPQVQRDSDFRALIFDSWFDKYRGALNLIYVLNGKLEQNQDI 317
Score = 46 (21.3 bits), Expect = 9.3e-06, Sum P(4) = 9.3e-06
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 494 YILEGLIRRDSKIRILRNKNIIWTGELDSLKRFKDNVKEVKAG 536
Y+L G + ++ I+ L K + + L+ + V +V AG
Sbjct: 305 YVLNGKLEQNQDIQSLATKKVYSVKSISVLRPAECPVPDVSAG 347
Score = 44 (20.5 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 1476 AIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKRFLKEN-ERKKKLHKF 1526
AIQ K+ I+ D ++ ++ R + LK+ E KKK+ F
Sbjct: 629 AIQACVGSKVLARETIKAYRKDVTAKLYGGDVTRRMKLLKQQAEGKKKMRMF 680
Score = 44 (20.5 bits), Expect = 9.3e-06, Sum P(4) = 9.3e-06
Identities = 7/38 (18%), Positives = 21/38 (55%)
Query: 747 IDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALKYK 784
ID + + + + +I+++FH ++ + Y++ Y+
Sbjct: 536 IDDTRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSYE 573
>UNIPROTKB|Q7Z2Z2 [details] [associations]
symbol:EFTUD1 "Elongation factor Tu GTP-binding
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0003746 "translation elongation factor activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0042256 "mature ribosome assembly" evidence=IMP]
[GO:0043022 "ribosome binding" evidence=IMP] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924 GO:GO:0043022
GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0042256 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 eggNOG:COG0480 EMBL:AK023181 EMBL:AK300348
EMBL:BX538332 EMBL:AC026624 EMBL:AC026956 IPI:IPI00293026
IPI:IPI00759768 RefSeq:NP_001035700.1 RefSeq:NP_078856.4
UniGene:Hs.459114 HSSP:P32324 ProteinModelPortal:Q7Z2Z2 SMR:Q7Z2Z2
IntAct:Q7Z2Z2 STRING:Q7Z2Z2 PhosphoSite:Q7Z2Z2 DMDM:166232397
PaxDb:Q7Z2Z2 PRIDE:Q7Z2Z2 DNASU:79631 Ensembl:ENST00000268206
Ensembl:ENST00000359445 GeneID:79631 KEGG:hsa:79631 UCSC:uc002bgt.1
UCSC:uc002bgu.1 CTD:79631 GeneCards:GC15M082422 H-InvDB:HIX0038366
HGNC:HGNC:25789 neXtProt:NX_Q7Z2Z2 PharmGKB:PA134902221
HOGENOM:HOG000231586 HOVERGEN:HBG101597 InParanoid:Q7Z2Z2 KO:K14536
OMA:MYTCEIM GenomeRNAi:79631 NextBio:68729 PMAP-CutDB:Q7Z2Z2
Bgee:Q7Z2Z2 CleanEx:HS_EFTUD1 Genevestigator:Q7Z2Z2 Uniprot:Q7Z2Z2
Length = 1120
Score = 269 (99.8 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 57/127 (44%), Positives = 78/127 (61%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY-NGT 985
++AHVDHGKTTL D L+ +G R MDS E E+ RGIT+ S S+ Y G
Sbjct: 24 VLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSREDEQIRGITMKSSAISLHYATGN 83
Query: 986 R---INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
IN+ID+PGH DF EV + + D ++++DAVEG PQT+ V R+A +P++
Sbjct: 84 EEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVL 143
Query: 1043 VVNKIDR 1049
V+NKIDR
Sbjct: 144 VINKIDR 150
Score = 122 (48.0 bits), Expect = 8.9e-05, Sum P(4) = 8.9e-05
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ + ++ D ++VV A +GV PQT+ + A + + ++ INK
Sbjct: 88 INLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVLVINK 147
Query: 178 IDKLDINLDRIKQDLIS 194
ID+L + L Q+ S
Sbjct: 148 IDRLIVELKFTPQEAYS 164
Score = 70 (29.7 bits), Expect = 8.9e-05, Sum P(4) = 8.9e-05
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 53 LLNEYNKNITAE-SLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFS 97
+LN +K I + + + ++ HVDHGKT+L D + +N + S
Sbjct: 2 VLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIIS 47
Score = 49 (22.3 bits), Expect = 8.9e-05, Sum P(4) = 8.9e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 512 KNIIWTGELDSLK----RFKDNVKEVKAGFECERLS 543
+N +WTG D R++D + +GF+ LS
Sbjct: 844 QNSVWTGPADKASKEASRYRDLGNSIVSGFQLATLS 879
Score = 42 (19.8 bits), Expect = 8.9e-05, Sum P(4) = 8.9e-05
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 280 SYGRIRSMLNENGKNILEAGPSI-PVEIQGLTKVP 313
++ R+ S + GK I GP P+E L +VP
Sbjct: 507 AFARVFSGVARRGKKIFVLGPKYSPLEF--LRRVP 539
Score = 42 (19.8 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 484 VNKVSKIAGCYILEGLIRRDSKIRIL-RNK 512
+N V K G Y+ E ++ K R L +NK
Sbjct: 1091 MNAVRKRKGLYVEEKIVEHAEKQRTLSKNK 1120
Score = 41 (19.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 20/89 (22%), Positives = 33/89 (37%)
Query: 1208 DPSK-PNGLP-----MLNIDEPTLTINFMVNNSPLAGREGKFITTRQ--IKN--RLDHEI 1257
D SK P G+ ++ I P V PL + + I++ +L +
Sbjct: 724 DQSKIPEGIQVDSDGLITITTPNKLATLSVRAMPLPEEVTQILEENSDLIRSMEQLTSSL 783
Query: 1258 KNNIGLRVTQNKHDDSIYEVSGRGELHLT 1286
+ K + I+E G+ E HLT
Sbjct: 784 NEGENTHMIHQKTQEKIWEFKGKLEQHLT 812
Score = 38 (18.4 bits), Expect = 0.00021, Sum P(4) = 0.00021
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 284 IRSM-LNENGKNILEAGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIGLFRQGK 338
+R+M L E ILE + ++ LT GE +I ++K +I F+ GK
Sbjct: 753 VRAMPLPEEVTQILEENSDLIRSMEQLTSSLNEGENTHMI-HQKTQEKIWEFK-GK 806
Score = 38 (18.4 bits), Expect = 0.00098, Sum P(4) = 0.00098
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 273 DIVVAGASYGRIRSMLNENGKNILEAGPSIPVEIQGLTKVPFSGEELFVILNEKKAREIG 332
DI+ G GR+ ++L++ +L+ ++ + K E F +E + R G
Sbjct: 988 DIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMF-IIKAVLPVAESFGFADEIRKRTSG 1046
Query: 333 L 333
L
Sbjct: 1047 L 1047
>TIGR_CMR|GSU_2859 [details] [associations]
symbol:GSU_2859 "translation elongation factor Tu"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004160 InterPro:IPR004161 InterPro:IPR004541
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03143 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR009001
InterPro:IPR009000 SUPFAM:SSF50465 SUPFAM:SSF50447 eggNOG:COG0050
HOGENOM:HOG000229290 KO:K02358 TIGRFAMs:TIGR00485
ProtClustDB:PRK00049 HAMAP:MF_00118_B OMA:CEFVGYN HSSP:P49410
RefSeq:NP_953902.1 RefSeq:NP_953913.1 ProteinModelPortal:Q748X8
SMR:Q748X8 PRIDE:Q748X8 GeneID:2686182 GeneID:2688703
KEGG:gsu:GSU2859 KEGG:gsu:GSU2871 PATRIC:22028565
BioCyc:GSUL243231:GH27-2840-MONOMER
BioCyc:GSUL243231:GH27-2852-MONOMER Uniprot:Q748X8
Length = 396
Score = 244 (91.0 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 85/293 (29%), Positives = 140/293 (47%)
Query: 928 IAHVDHGKTTL---IDHLLRQSGT--FRKNQNINARIMDSNEIEKERGITIFSKNCSIEY 982
I HVDHGKTTL I +L + G FR I D+ E+ERGITI + + E
Sbjct: 18 IGHVDHGKTTLTAAITKVLAERGQAEFRGFDQI-----DNAPEERERGITIATSHVEYET 72
Query: 983 NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
+D PGHAD+ + + +D +L++ A +GPMPQTR A ++G IV
Sbjct: 73 EKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIV 132
Query: 1043 V-VNKIDRSNARPEWVVDATFDLFDKLCATE-EQLDFPVIYTSALHGYANENSKARQGNM 1100
V +NK D + E + ++ + L + + D P+I SAL G + + + +
Sbjct: 133 VFLNKADMVDDE-ELLELVELEIRELLSSYDFPGDDIPIIKGSALKGLNGDKDELGEEAI 191
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
+ L EA+ Y+P + + P + + + S G + GR+ G +K ++V I+
Sbjct: 192 LKLMEAVDNYIPEPERAVDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGEEVEIVG-- 249
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIV--LITGI--EEICIGSTICDP 1209
K + + +F R L++E +GD + L+ G+ E+I G + P
Sbjct: 250 IKATAKTTVTGVEMF----RKLLDEGRAGDNIGALLRGVKREDIERGQVLAKP 298
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 91/296 (30%), Positives = 131/296 (44%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAG--GITQHIGA-------YNVVTNHGSI------- 118
+GHVDHGKT+L I K +A G Q A + T+H
Sbjct: 18 IGHVDHGKTTLTAAITKVLAERGQAEFRGFDQIDNAPEERERGITIATSHVEYETEKRHY 77
Query: 119 TFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA-INK 177
+D PGH + GA D +LVV+A DG MPQTRE I A+ GVP IV +NK
Sbjct: 78 AHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNK 137
Query: 178 IDKLD----INLDRIK-QDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEI 232
D +D + L ++ ++L+S P G P I SA G+ +K + + +A I
Sbjct: 138 ADMVDDEELLELVELEIRELLSSYDFP---GDDIPIIKGSALKGLNGDK--DELGEEA-I 191
Query: 233 LELKAPVTTPAKGVIIESRLDKG-KGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNEN 291
L+L V E +DK PV V SG + GR+ E
Sbjct: 192 LKLMEAVDNYIPEP--ERAVDKPFLMPVEDVFSISGR--------GTVATGRV-----ER 236
Query: 292 GKNILEAGPSIP-VEIQGLTKVPFSGEELF-VILNEKKARE-IGLFRQG-KFRDVK 343
G I++ G + V I+ K +G E+F +L+E +A + IG +G K D++
Sbjct: 237 G--IVKVGEEVEIVGIKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIE 290
>TIGR_CMR|GSU_2871 [details] [associations]
symbol:GSU_2871 "translation elongation factor Tu"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] InterPro:IPR000795
InterPro:IPR004160 InterPro:IPR004161 InterPro:IPR004541
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03143 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005737 GO:GO:0003924 GO:GO:0006184 GO:GO:0003746
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR009001
InterPro:IPR009000 SUPFAM:SSF50465 SUPFAM:SSF50447 eggNOG:COG0050
HOGENOM:HOG000229290 KO:K02358 TIGRFAMs:TIGR00485
ProtClustDB:PRK00049 HAMAP:MF_00118_B OMA:CEFVGYN HSSP:P49410
RefSeq:NP_953902.1 RefSeq:NP_953913.1 ProteinModelPortal:Q748X8
SMR:Q748X8 PRIDE:Q748X8 GeneID:2686182 GeneID:2688703
KEGG:gsu:GSU2859 KEGG:gsu:GSU2871 PATRIC:22028565
BioCyc:GSUL243231:GH27-2840-MONOMER
BioCyc:GSUL243231:GH27-2852-MONOMER Uniprot:Q748X8
Length = 396
Score = 244 (91.0 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 85/293 (29%), Positives = 140/293 (47%)
Query: 928 IAHVDHGKTTL---IDHLLRQSGT--FRKNQNINARIMDSNEIEKERGITIFSKNCSIEY 982
I HVDHGKTTL I +L + G FR I D+ E+ERGITI + + E
Sbjct: 18 IGHVDHGKTTLTAAITKVLAERGQAEFRGFDQI-----DNAPEERERGITIATSHVEYET 72
Query: 983 NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
+D PGHAD+ + + +D +L++ A +GPMPQTR A ++G IV
Sbjct: 73 EKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIV 132
Query: 1043 V-VNKIDRSNARPEWVVDATFDLFDKLCATE-EQLDFPVIYTSALHGYANENSKARQGNM 1100
V +NK D + E + ++ + L + + D P+I SAL G + + + +
Sbjct: 133 VFLNKADMVDDE-ELLELVELEIRELLSSYDFPGDDIPIIKGSALKGLNGDKDELGEEAI 191
Query: 1101 IPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIMNGP 1160
+ L EA+ Y+P + + P + + + S G + GR+ G +K ++V I+
Sbjct: 192 LKLMEAVDNYIPEPERAVDKPFLMPVEDVFSISGRGTVATGRVERGIVKVGEEVEIVG-- 249
Query: 1161 DDKPNKAKINQIRVFKGLDRVLVNEALSGDIV--LITGI--EEICIGSTICDP 1209
K + + +F R L++E +GD + L+ G+ E+I G + P
Sbjct: 250 IKATAKTTVTGVEMF----RKLLDEGRAGDNIGALLRGVKREDIERGQVLAKP 298
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 91/296 (30%), Positives = 131/296 (44%)
Query: 75 MGHVDHGKTSLLDYIRKTNVVFSEAG--GITQHIGA-------YNVVTNHGSI------- 118
+GHVDHGKT+L I K +A G Q A + T+H
Sbjct: 18 IGHVDHGKTTLTAAITKVLAERGQAEFRGFDQIDNAPEERERGITIATSHVEYETEKRHY 77
Query: 119 TFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVA-INK 177
+D PGH + GA D +LVV+A DG MPQTRE I A+ GVP IV +NK
Sbjct: 78 AHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNK 137
Query: 178 IDKLD----INLDRIK-QDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEI 232
D +D + L ++ ++L+S P G P I SA G+ +K + + +A I
Sbjct: 138 ADMVDDEELLELVELEIRELLSSYDFP---GDDIPIIKGSALKGLNGDK--DELGEEA-I 191
Query: 233 LELKAPVTTPAKGVIIESRLDKG-KGPVATVLIQSGTLRCSDIVVAGASYGRIRSMLNEN 291
L+L V E +DK PV V SG + GR+ E
Sbjct: 192 LKLMEAVDNYIPEP--ERAVDKPFLMPVEDVFSISGR--------GTVATGRV-----ER 236
Query: 292 GKNILEAGPSIP-VEIQGLTKVPFSGEELF-VILNEKKARE-IGLFRQG-KFRDVK 343
G I++ G + V I+ K +G E+F +L+E +A + IG +G K D++
Sbjct: 237 G--IVKVGEEVEIVGIKATAKTTVTGVEMFRKLLDEGRAGDNIGALLRGVKREDIE 290
>CGD|CAL0001869 [details] [associations]
symbol:RIA1 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0042256 "mature ribosome assembly" evidence=IEA]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 CGD:CAL0001869
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0006184 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AACQ01000115
EMBL:AACQ01000111 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 KO:K14536 RefSeq:XP_713895.1 RefSeq:XP_714097.1
STRING:Q59WB7 GeneID:3644280 GeneID:3644478 KEGG:cal:CaO19.11931
KEGG:cal:CaO19.4451 Uniprot:Q59WB7
Length = 1044
Score = 221 (82.9 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 59/164 (35%), Positives = 85/164 (51%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
I+AHVDHGKT+L D LL +G + R +DS E E+ RGIT+ S S+ + R
Sbjct: 23 ILAHVDHGKTSLSDSLLATNGIISQRMAGKVRYLDSREDEQLRGITMESSAISLYFKVMR 82
Query: 987 --------------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRK 1032
IN+ID+PGH DF EV + D ++L+D VEG QT V R+
Sbjct: 83 LQQGSQEPEVHEHLINLIDSPGHIDFSSEVSTSSRLCDGAVVLVDVVEGVCSQTVNVLRQ 142
Query: 1033 ALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLD 1076
KP++V+NKIDR EW + + + + + EQ++
Sbjct: 143 CWIDKLKPLLVINKIDRLIT--EWKL-SPLEAYQHISRIIEQVN 183
Score = 90 (36.7 bits), Expect = 6.3e-06, Sum P(4) = 6.3e-06
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ + +++ D V++V +GV QT + I + ++ INK
Sbjct: 97 INLIDSPGHIDFSSEVSTSSRLCDGAVVLVDVVEGVCSQTVNVLRQCWIDKLKPLLVINK 156
Query: 178 IDKL 181
ID+L
Sbjct: 157 IDRL 160
Score = 88 (36.0 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 45/193 (23%), Positives = 85/193 (44%)
Query: 1138 IGIGRILSGRIKSLQDVVIMNGPDDKP--------------NKAKINQIRVFKGLDRVLV 1183
+G RI SG + Q + ++ GP P N+ +I + + G + V +
Sbjct: 516 VGFTRIYSGSLSRGQKLTVI-GPKYDPSLPRDHQTNFEQITNEVEIKDLFLIMGRELVRM 574
Query: 1184 NEALSGDIVLITGIEEICI-GSTICDPSKPNGLPMLNIDEPTLTINFMVNNSPL---AGR 1239
+ +G+IV + G++ + +TIC P P P +N+ T T+ ++N P+ A
Sbjct: 575 EKVPAGNIVGVVGLDNAVLKNATICSPL-PEDKPYINLAS-TSTL---IHNKPIMKIAVE 629
Query: 1240 EGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRR---EG 1296
I +++ LD K + L + + V GELHL ++++ +G
Sbjct: 630 PTNPIKLAKLERGLDLLAKADPVLEWYVDDESGELI-VCVAGELHLERCLKDLEERFAKG 688
Query: 1297 YELSVSRPRVIFK 1309
E++V P + F+
Sbjct: 689 CEVTVKEPVIPFR 701
Score = 77 (32.2 bits), Expect = 6.3e-06, Sum P(4) = 6.3e-06
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 58 NKNITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSE 98
NK + S +R + I+ HVDHGKTSL D + TN + S+
Sbjct: 9 NKLQSDASCIRN--ICILAHVDHGKTSLSDSLLATNGIISQ 47
Score = 40 (19.1 bits), Expect = 6.3e-06, Sum P(4) = 6.3e-06
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 314 FSGEELFVILNEKKAREIGLFRQGKFRDVKLSKQK 348
F+G+ L LN ++A +G F + D+ + +K
Sbjct: 190 FAGDRLEDDLNWREAGSVGEFIEKSDEDLYFTPEK 224
Score = 38 (18.4 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 20/75 (26%), Positives = 36/75 (48%)
Query: 1443 GMIIGIHSRDNDLLVN-----PIKE-KQLTNIRSSGS--------DEAIQLISPIKIT-L 1487
G I+G+ DN +L N P+ E K N+ S+ + A++ +PIK+ L
Sbjct: 580 GNIVGVVGLDNAVLKNATICSPLPEDKPYINLASTSTLIHNKPIMKIAVEPTNPIKLAKL 639
Query: 1488 EYAIEFI-NDDELVE 1501
E ++ + D ++E
Sbjct: 640 ERGLDLLAKADPVLE 654
>TAIR|locus:2178042 [details] [associations]
symbol:AT5G39900 "AT5G39900" species:3702 "Arabidopsis
thaliana" [GO:0003746 "translation elongation factor activity"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] HAMAP:MF_00071 InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006297
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 PROSITE:PS00301
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0006412
GO:GO:0003924 GO:GO:0006184 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HSSP:P32324 EMBL:AB010077 EMBL:BT020385 EMBL:BT020455
IPI:IPI00527062 RefSeq:NP_198806.2 UniGene:At.43683
ProteinModelPortal:Q9FLE4 SMR:Q9FLE4 STRING:Q9FLE4 PaxDb:Q9FLE4
PRIDE:Q9FLE4 EnsemblPlants:AT5G39900.1 GeneID:833987
KEGG:ath:AT5G39900 TAIR:At5g39900 eggNOG:COG0481
HOGENOM:HOG000020624 InParanoid:Q9FLE4 OMA:RMKRVGS PhylomeDB:Q9FLE4
ProtClustDB:CLSN2690140 Genevestigator:Q9FLE4 InterPro:IPR013842
PANTHER:PTHR23115:SF40 Pfam:PF06421 TIGRFAMs:TIGR01393
Uniprot:Q9FLE4
Length = 663
Score = 250 (93.1 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 57/150 (38%), Positives = 84/150 (56%)
Query: 926 AIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY--- 982
+IIAH+DHGK+TL D L+ +GT +K + +D ++E+ERGIT+ ++ ++ Y
Sbjct: 70 SIIAHIDHGKSTLADRLMELTGTIKKGHG-QPQYLDKLQVERERGITVKAQTATMFYENK 128
Query: 983 ------NGTRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKL 1036
+G +N+IDTPGH DF EV R LS LL++DA +G QT A +
Sbjct: 129 VEDQEASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQGVQAQTVANFYLAFEA 188
Query: 1037 GFKPIVVVNKIDRSNARPEWVVDATFDLFD 1066
+ V+NKID+ A PE V +FD
Sbjct: 189 NLTIVPVINKIDQPTADPERVKAQLKSMFD 218
Score = 131 (51.2 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 49/166 (29%), Positives = 78/166 (46%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
+ +DTPGH F+ +R +LVV A GV QT A + + ++ INK
Sbjct: 139 LNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQGVQAQTVANFYLAFEANLTIVPVINK 198
Query: 178 IDKLDINLDRIKQDLISEQVIPEEYGGASPFISISAKTGVGINKLLENISLQAEILELKA 237
ID+ + +R+K L S + E + +SAKTG+G LE++ L A I +
Sbjct: 199 IDQPTADPERVKAQLKSMFDLDTE-----DVLLVSAKTGLG----LEHV-LPAVIERIPP 248
Query: 238 PV---TTPAKGVIIESRLDKGKGPVATVLIQSGTLRCSDIVVAGAS 280
P +P + ++ +S ++ KG + V + G L D V AS
Sbjct: 249 PPGISESPLRMLLFDSFFNEYKGVICYVSVVDGMLSKGDKVSFAAS 294
Score = 63 (27.2 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 73 TIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHG 116
+I+ H+DHGK++L D + + + G Q++ V G
Sbjct: 70 SIIAHIDHGKSTLADRLMELTGTIKKGHGQPQYLDKLQVERERG 113
Score = 56 (24.8 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 1332 GIIMQKLNYRGGDLKNIEINEKERVRLEYRIPSRGLI-GFQNEFITLTRGTGLISHVFEE 1390
G ++ + R G + +RV L+Y++P R ++ F +E ++T G + E
Sbjct: 483 GAVINLCSDRRGQQLEYTFIDAQRVFLKYQLPLREIVVDFYDELKSITSGYASFDYEDAE 542
Query: 1391 Y 1391
Y
Sbjct: 543 Y 543
Score = 43 (20.2 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 9/43 (20%), Positives = 22/43 (51%)
Query: 1106 AILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRI 1148
A+++ +P S +PL++ + ++ Y G I ++ G +
Sbjct: 241 AVIERIPPPPGISESPLRMLLFDSFFNEYKGVICYVSVVDGML 283
Score = 43 (20.2 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 12/60 (20%), Positives = 28/60 (46%)
Query: 725 KYYEAIIHLGITTETGDIEGKIIDFNKNIPNSIEIIEKILINFHGKISQIPPMYSALKYK 784
+Y A+I+L +E ID + + +I+++F+ ++ I Y++ Y+
Sbjct: 480 EYVGAVINLCSDRRGQQLEYTFIDAQRVFLKYQLPLREIVVDFYDELKSITSGYASFDYE 539
Score = 41 (19.5 bits), Expect = 2.5e-17, Sum P(4) = 2.5e-17
Identities = 21/103 (20%), Positives = 41/103 (39%)
Query: 1424 WKLQDRGRLFINHNDLVYEGMIIGIHSRDNDLLVNPIKEKQLTNIRSSGSDEAIQLISPI 1483
++ D +L I N + + +H + + + EK I + IQ
Sbjct: 543 YQASDLVKLDILLNGQAVDALATIVHKQKAYRVGKELVEKLKNYIERQMFEVMIQAAIGS 602
Query: 1484 KITLEYAIEFINDDELVEITPKNIRLRKRFL-KENERKKKLHK 1525
KI I + + L + +I +K+ L K+ E KK++ +
Sbjct: 603 KIIARDTISAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKR 645
Score = 40 (19.1 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 359 INKEKVKNLLIII-KTDVYGSREVLTESLKNLSTDKVKIQVIHNAVGN 405
+N + V L I+ K Y + L E LKN ++ +I A+G+
Sbjct: 555 LNGQAVDALATIVHKQKAYRVGKELVEKLKNYIERQMFEVMIQAAIGS 602
>WB|WBGene00022491 [details] [associations]
symbol:Y119D3B.14 species:6239 "Caenorhabditis elegans"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 PROSITE:PS00301 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924
GO:GO:0006184 GO:GO:0003746 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 EMBL:FO081827 InterPro:IPR009022
SMART:SM00838 SUPFAM:SSF54980 eggNOG:COG0480 HOGENOM:HOG000231585
OMA:IMRIRDD GeneTree:ENSGT00550000074890 EMBL:AB432986
RefSeq:NP_497345.2 UniGene:Cel.24885 ProteinModelPortal:Q95Y73
SMR:Q95Y73 EnsemblMetazoa:Y119D3B.14 GeneID:191043
KEGG:cel:CELE_Y119D3B.14 UCSC:Y119D3B.14 CTD:191043
WormBase:Y119D3B.14 InParanoid:Q95Y73 NextBio:947762 Uniprot:Q95Y73
Length = 731
Score = 247 (92.0 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 54/136 (39%), Positives = 83/136 (61%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINA--RIMDSNEIEKERGITIFSKNCSIEYNG 984
+IAHVD GKTT+ + LL +G +++ + D +IE+ERGIT+ S ++++ G
Sbjct: 30 VIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERERGITVQSAAVNLDWKG 89
Query: 985 TRINIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIVVV 1044
RIN+IDTPGH DF EVER + ++D ++++ID G PQT V R++ K +
Sbjct: 90 HRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQSSKFKLPAHFFI 149
Query: 1045 NKIDRSNARPEWVVDA 1060
NK+D+ A E VD+
Sbjct: 150 NKMDKLAANFENSVDS 165
Score = 145 (56.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 57/186 (30%), Positives = 82/186 (44%)
Query: 61 ITAESLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFSEAGGITQHIGAYNVVTNHGSITF 120
+T L A + + GHVD G T + D++ GIT A N+ I
Sbjct: 41 VTERLLYLAGAIHVAGHVDKGNT-VTDFLD-----IERERGITVQSAAVNLDWKGHRINL 94
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH F R +V D +V+V+ GV PQT + +P INK+DK
Sbjct: 95 IDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQSSKFKLPAHFFINKMDK 154
Query: 181 LDIN----LDRIKQDLISEQV-----IPEEYGGASPFISI-SAKTGVGINKLLENI---S 227
L N +D ++Q L V +PE G F+ I +K G +K +N S
Sbjct: 155 LAANFENSVDSVEQKLGVRAVKLVVPLPENRGFNRGFLDILHSKMLPGNSKNWQNPPKNS 214
Query: 228 LQAEIL 233
+AE+L
Sbjct: 215 PEAELL 220
Score = 53 (23.7 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 34/154 (22%), Positives = 64/154 (41%)
Query: 1063 DLF-DKL-CATEEQLDFPVIYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNN 1120
D+F KL A E L + YT+ + +E + + E ++P K
Sbjct: 501 DVFIGKLQVAYREMLTEELSYTAKVEDGLSEKKRPEFVQLTMRLEPTQAHIPFKKIELEL 560
Query: 1121 PLQLQIISLEYSSYLGKIGIGRILSGRIKSLQ-DVVIMNGPDDKPNKAKINQIRVFKGLD 1179
P + + L++ + + + +G + S V + + + KIN +
Sbjct: 561 PQTARPVRLDWQKAVNEGCSNALQNGPLASYPVHAVRVVLTECIVSGGKINPA-LLSACA 619
Query: 1180 RVLVNEALS-GDIVLITGIEEICIGSTICDPSKP 1212
+ V+EALS G++VL + E+ I DP++P
Sbjct: 620 QKCVSEALSSGEMVLTEPVMEVQIEIRNDDPTQP 653
Score = 52 (23.4 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 29/114 (25%), Positives = 47/114 (41%)
Query: 1299 LSVSRPRVIFKTLN-GE--LYEPYENLFVDI--EEINQGIIMQKLNYRGGDLKNIEINEK 1353
LS + + + L+ GE L EP + ++I ++ Q I+ + L R ++ + E
Sbjct: 615 LSACAQKCVSEALSSGEMVLTEPVMEVQIEIRNDDPTQPILNELLRRRA-HFEHSDATES 673
Query: 1354 ERVRLEYRI-PSRGLIGFQNEFITLTRGTGLISHVFEEYAPFYNKSKYDLGKRR 1406
+R I P TLT G G IS F Y K ++ K+R
Sbjct: 674 TEIRRICAILPLSETENLSKTVRTLTSGFGDISVQFRGYQQVTEHEKMEILKKR 727
Score = 51 (23.0 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 42/221 (19%), Positives = 89/221 (40%)
Query: 1102 PLFEAILKYVPV-------HKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDV 1154
P+ +A++ + P +D L + + + G++ RI +G + + +
Sbjct: 288 PVLDAVVDFFPAPEMRNREFRDVFGEDLSGLVFKITHDKRRGQLSYMRIYTGSLHN--NS 345
Query: 1155 VIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGSTIC--DPSKP 1212
I N ++ + + R LV + +G+I ++ G++ G T+ S
Sbjct: 346 TIFN-TSQMTSEGPLKLFTPYADELR-LVEQVSAGNITVVAGLQTTVTGDTVVASSASAE 403
Query: 1213 NGLPMLNIDEPTLTINFMVNNSPLAGREGK---FI------TTRQIK--NRLDHEI-KNN 1260
L E +L N+ +G E F + RQ+ N+ E+ + +
Sbjct: 404 KACQKLAGSESSLLSPKDGNSVVFSGIESPDAVFFCCIEPPSNRQLNQFNKALEELTRED 463
Query: 1261 IGLRVTQNKHDDSIYEVSGRGELHLTILIENMRREGYELSV 1301
+++ ++ D V +GELHL + + ++R Y+L V
Sbjct: 464 PSMKIRFDR-DTGQTIVETQGELHLEAIKDRLKRN-YKLDV 502
Score = 49 (22.3 bits), Expect = 5.5e-17, Sum P(3) = 5.5e-17
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 1453 NDLLVNPIKEKQLTNIRSSGSDEAIQLISPIKITLEYAIEFINDDELVEITPKNIRLRKR 1512
N L++ +K ++ SSG E + L P+ +E IE NDD I + +R R
Sbjct: 611 NPALLSACAQKCVSEALSSG--EMV-LTEPV---MEVQIEIRNDDPTQPILNELLRRRAH 664
Query: 1513 F 1513
F
Sbjct: 665 F 665
>SGD|S000005713 [details] [associations]
symbol:TUF1 "Mitochondrial translation elongation factor Tu"
species:4932 "Saccharomyces cerevisiae" [GO:0032543 "mitochondrial
translation" evidence=IGI] [GO:0003746 "translation elongation
factor activity" evidence=IEA;IGI;ISS;IDA] [GO:0006184 "GTP
catabolic process" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA;IGI;IDA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0070125 "mitochondrial
translational elongation" evidence=ISA] InterPro:IPR000795
InterPro:IPR004160 InterPro:IPR004161 InterPro:IPR004541
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03143 Pfam:PF03144
PRINTS:PR00315 PROSITE:PS00301 UniPathway:UPA00345 SGD:S000005713
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:BK006948 GO:GO:0005759
GO:GO:0003924 GO:GO:0003746 GO:GO:0032543 InterPro:IPR009001
InterPro:IPR009000 SUPFAM:SSF50465 SUPFAM:SSF50447 eggNOG:COG0050
HOGENOM:HOG000229290 KO:K02358 TIGRFAMs:TIGR00485 OMA:CEFVGYN
GeneTree:ENSGT00550000074682 PANTHER:PTHR23115:SF31
OrthoDB:EOG42RHGS EMBL:K00428 EMBL:Z75095 PIR:A03520
RefSeq:NP_014830.1 ProteinModelPortal:P02992 SMR:P02992
DIP:DIP-4130N IntAct:P02992 MINT:MINT-497322 STRING:P02992
PaxDb:P02992 PeptideAtlas:P02992 PRIDE:P02992 EnsemblFungi:YOR187W
GeneID:854359 KEGG:sce:YOR187W CYGD:YOR187w NextBio:976464
Genevestigator:P02992 GermOnline:YOR187W Uniprot:P02992
Length = 437
Score = 245 (91.3 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 83/324 (25%), Positives = 153/324 (47%)
Query: 895 IIYLSDLLSKRFLHGQNLFLSD-ENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQ 953
++ LS ++S+ F + + + + I HVDHGKTTL + +
Sbjct: 20 LLRLSSVISRTFSQTTTSYAAAFDRSKPHVNIGTIGHVDHGKTTLTAAITKTLAAKGGAN 79
Query: 954 NINARIMDSNEIEKERGITIFSKNCSIEYNGTRINIIDTPGHADFGGEVERILSMVDNVL 1013
++ +D E+ RGITI + + E + +D PGHAD+ + + +D +
Sbjct: 80 FLDYAAIDKAPEERARGITISTAHVEYETAKRHYSHVDCPGHADYIKNMITGAAQMDGAI 139
Query: 1014 LLIDAVEGPMPQTRFVTRKALKLGFKPIVV-VNKIDRSNARPEWVVDATFDLFDKLCATE 1072
+++ A +G MPQTR A ++G + IVV VNK+D + PE + ++ + L E
Sbjct: 140 IVVAATDGQMPQTREHLLLARQVGVQHIVVFVNKVDTIDD-PEMLELVEMEMRELL--NE 196
Query: 1073 EQLD---FPVIYTSALHGYANENSKARQGNMIPLFEAILKYVPVHKDNSNNPLQLQIISL 1129
D P+I SAL + + ++ L +A+ +Y+P + + N P + + +
Sbjct: 197 YGFDGDNAPIIMGSALCALEGRQPEIGEQAIMKLLDAVDEYIPTPERDLNKPFLMPVEDI 256
Query: 1130 EYSSYLGKIGIGRILSGRIKSLQDVVIMNGPDDKPNKAKINQIRVFKGLDRVLVNEALSG 1189
S G + GR+ G +K +++ I+ G + P K + I +F R ++ A++G
Sbjct: 257 FSISGRGTVVTGRVERGNLKKGEELEIV-GHNSTPLKTTVTGIEMF----RKELDSAMAG 311
Query: 1190 DI--VLITGI--EEICIGSTICDP 1209
D VL+ GI +++ G + P
Sbjct: 312 DNAGVLLRGIRRDQLKRGMVLAKP 335
Score = 164 (62.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 71/233 (30%), Positives = 104/233 (44%)
Query: 75 MGHVDHGKTSL----------------LDYIRKTNVVFSEAGGIT---QHIGAYNVVTNH 115
+GHVDHGKT+L LDY A GIT H+ Y H
Sbjct: 54 IGHVDHGKTTLTAAITKTLAAKGGANFLDYAAIDKAPEERARGITISTAHV-EYETAKRH 112
Query: 116 GSITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVP-LIVA 174
S +D PGH + GA D ++VVAA DG MPQTRE + A+ GV ++V
Sbjct: 113 YS--HVDCPGHADYIKNMITGAAQMDGAIIVVAATDGQMPQTREHLLLARQVGVQHIVVF 170
Query: 175 INKIDKLDINLDRIKQDLISEQV--IPEEYG---GASPFI---SISAKTG----VG---I 219
+NK+D +D D +L+ ++ + EYG +P I ++ A G +G I
Sbjct: 171 VNKVDTID---DPEMLELVEMEMRELLNEYGFDGDNAPIIMGSALCALEGRQPEIGEQAI 227
Query: 220 NKLLENIS--LQAEILELKAPVTTPAKGVIIESRLDKGKGPVATVLIQSGTLR 270
KLL+ + + +L P P + + S G+G V T ++ G L+
Sbjct: 228 MKLLDAVDEYIPTPERDLNKPFLMPVEDIFSIS----GRGTVVTGRVERGNLK 276
Score = 40 (19.1 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 1272 DSIYEVSGRGELHLTILIE--NMRREGYELSV 1301
+ I+ +SGRG + +T +E N+++ G EL +
Sbjct: 254 EDIFSISGRGTV-VTGRVERGNLKK-GEELEI 283
>UNIPROTKB|E2R2G9 [details] [associations]
symbol:EFTUD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0042256 "mature ribosome assembly" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0003924 GO:GO:0043022 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0042256 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 CTD:79631 KO:K14536 OMA:MYTCEIM
GeneTree:ENSGT00550000074806 EMBL:AAEX03002362 EMBL:AAEX03002363
RefSeq:XP_850111.1 Ensembl:ENSCAFT00000021731 GeneID:479061
KEGG:cfa:479061 NextBio:20854304 Uniprot:E2R2G9
Length = 1128
Score = 264 (98.0 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 55/127 (43%), Positives = 77/127 (60%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEYNGTR 986
++AHVDHGKTTL D L+ +G R MDS E E+ RGIT+ S S+ Y
Sbjct: 24 VLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSREDEQVRGITMKSSAISLHYAKDN 83
Query: 987 ----INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
IN+ID+PGH DF EV + + D ++++DAVEG PQT+ V R+A +P++
Sbjct: 84 EDYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVL 143
Query: 1043 VVNKIDR 1049
V+NK+DR
Sbjct: 144 VINKLDR 150
Score = 120 (47.3 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ + ++ D ++VV A +GV PQT+ + A + + ++ INK
Sbjct: 88 INLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVLVINK 147
Query: 178 IDKLDINLDRIKQDLIS 194
+D+L + L Q+ S
Sbjct: 148 LDRLIVELKFTPQEAYS 164
Score = 68 (29.0 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 53 LLNEYNKNITAE-SLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFS 97
+LN K I + + + ++ HVDHGKT+L D + +N + S
Sbjct: 2 VLNSLEKMIHLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIIS 47
Score = 49 (22.3 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 236 KAPVTTPAKGVIIES--RLDKGKGP---VATVLIQSGTLRCSDIVVAGASYGRIRSMLNE 290
+AP+ P G +E+ + ++ KG + TV ++S ++ + ++ R+ S +
Sbjct: 459 QAPMERPQGGSALETSPQAEEPKGDEHQLETVTLKSLPQEGNN-QESFIAFARVFSGVAR 517
Query: 291 NGKNILEAGPSI-PVEIQGLTKVP 313
GK I GP PVE L +VP
Sbjct: 518 RGKKIFVLGPKYSPVEF--LQRVP 539
Score = 44 (20.5 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 29/125 (23%), Positives = 49/125 (39%)
Query: 1163 KPNKAKINQIRVFKGLDRVLVNEALSGDIVLITGIEEICIGS-TICDPSKPNGLPMLNID 1221
KP K + + K ++++ + GI+ G TI P+K L + +
Sbjct: 698 KPPKVDMVNEEIGKQQKVAVIHQTKEDQSKIPEGIQVDSDGLITITTPNKLATLSVRAMP 757
Query: 1222 EPTLTINFMVNNSPLAGREGKFITTRQIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRG 1281
P + NS L + Q+ + L+ N + + TQ K ++E GR
Sbjct: 758 LPEEVTQILEENSDLIR------SMEQLTSSLNEGRHNQMMHQKTQEK----MWEFKGRL 807
Query: 1282 ELHLT 1286
E HLT
Sbjct: 808 EQHLT 812
Score = 42 (19.8 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 484 VNKVSKIAGCYILEGLIRRDSKIRIL-RNK 512
+N V K G Y+ E ++ K R L +NK
Sbjct: 1099 MNAVRKRKGLYVEEKIVEHAEKQRTLSKNK 1128
Score = 39 (18.8 bits), Expect = 0.00026, Sum P(5) = 0.00026
Identities = 4/21 (19%), Positives = 13/21 (61%)
Query: 757 IEIIEKILINFHGKISQIPPM 777
+E ++++ + F + +PP+
Sbjct: 532 VEFLQRVPLGFSAPLEDLPPV 552
>FB|FBgn0053158 [details] [associations]
symbol:CG33158 species:7227 "Drosophila melanogaster"
[GO:0006414 "translational elongation" evidence=ISS] [GO:0005850
"eukaryotic translation initiation factor 2 complex" evidence=ISS]
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315
InterPro:IPR000640 Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231
EMBL:AE014296 GO:GO:0003924 GO:GO:0006184 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
Gene3D:3.30.70.240 InterPro:IPR009000 SUPFAM:SSF50447
InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980 HSSP:P32324
KO:K14536 OMA:MYTCEIM GeneTree:ENSGT00550000074806
FlyBase:FBgn0053158 RefSeq:NP_788515.1 UniGene:Dm.4225
ProteinModelPortal:Q9VV61 SMR:Q9VV61 IntAct:Q9VV61 STRING:Q9VV61
EnsemblMetazoa:FBtr0075390 GeneID:39834 KEGG:dme:Dmel_CG33158
UCSC:CG33158-RB InParanoid:Q9VV61 PhylomeDB:Q9VV61 GenomeRNAi:39834
NextBio:815624 ArrayExpress:Q9VV61 Bgee:Q9VV61 Uniprot:Q9VV61
Length = 1033
Score = 259 (96.2 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 62/179 (34%), Positives = 94/179 (52%)
Query: 907 LHGQNLFLSDENIYILIKSAIIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIE 966
+ G +L L + I+AHVDHGKTTL D L+ +G + R +D+ E
Sbjct: 4 VEGSDLVLLQRRRQQVRNICILAHVDHGKTTLADSLVASNGIISQRMAGKLRYLDNRSDE 63
Query: 967 KERGITIFSKNCSIEYNGTR---------INIIDTPGHADFGGEVERILSMVDNVLLLID 1017
+ERGIT+ S + S+ Y IN+ID+PGH DF EV + + D ++++D
Sbjct: 64 QERGITMKSSSISLYYQEAEEMAGNPDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVD 123
Query: 1018 AVEGPMPQTRFVTRKALKLGFKPIVVVNKIDRSNARPEWVVDATFDLFDKLCATEEQLD 1076
VEG PQTR R+ + KP++V+NK+DR + +D D + LC EQ++
Sbjct: 124 VVEGVGPQTRACLRQIYEEQLKPVLVLNKLDRLILEKQ--MDP-LDAYFHLCQVLEQVN 179
Score = 47 (21.6 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 1165 NKAKINQIRVFKGLDRVLVNEALSGDIVLITGIE 1198
++ I + +F G + L++E +G+IV I G+E
Sbjct: 527 SRVTIGDLYMFMGGELQLLDEVPAGNIVGIGGLE 560
>POMBASE|SPCC553.08c [details] [associations]
symbol:SPCC553.08c "GTPase Ria1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=ISO] [GO:0005525 "GTP binding" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=ISO]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144 Pfam:PF03764
PRINTS:PR00315 PomBase:SPCC553.08c InterPro:IPR000640 Pfam:PF00679
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003924 GO:GO:0042254
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
eggNOG:COG0480 HOGENOM:HOG000231586 KO:K14536 OMA:MYTCEIM
HSSP:O26359 PIR:T41396 RefSeq:NP_587766.1 ProteinModelPortal:O74945
STRING:O74945 EnsemblFungi:SPCC553.08c.1 GeneID:2539293
KEGG:spo:SPCC553.08c OrthoDB:EOG4W11NB NextBio:20800460
Uniprot:O74945
Length = 1000
Score = 216 (81.1 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 56/135 (41%), Positives = 71/135 (52%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCS-----IE 981
++AHVDHGKTTL D LL +G R +D E E RGIT+ S S I
Sbjct: 24 LLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSAISLFFKVIS 83
Query: 982 YNGTR-------INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKAL 1034
N + IN+ID+PGH DF EV + D +L+DAVEG QT V R+A
Sbjct: 84 QNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQAW 143
Query: 1035 KLGFKPIVVVNKIDR 1049
K I+V+NK+DR
Sbjct: 144 IDRIKVILVINKMDR 158
Score = 98 (39.6 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 118 ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINK 177
I +D+PGH F++ + +++ D ++V A +GV QT + A I + +I+ INK
Sbjct: 96 INLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEGVCSQTITVLRQAWIDRIKVILVINK 155
Query: 178 IDKL 181
+D+L
Sbjct: 156 MDRL 159
Score = 89 (36.4 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 41/182 (22%), Positives = 79/182 (43%)
Query: 1138 IGIGRILSGRIKSLQDVVIMN------GPDDKPNKAKINQIRVFKGLDRVLVNEALSGDI 1191
IG RI SG I Q+V + P+ K + + + G + V + +G++
Sbjct: 469 IGFARIYSGTISVGQEVYVYGPKYDPVNPEKHITKVTVESLYLMMGQELVYLETVPAGNV 528
Query: 1192 VLITGIEEICIGS-TICDPSKPNGLPMLNIDEPTLTINFMVNNSPLAGRE-GKFITTRQI 1249
I G+ + + T+C S PNG ++ + + I V P+ E K +T +
Sbjct: 529 FAIGGLAGTVLRTATLC--SSPNGPNLVGVTQQMEPI-VRVALEPVRPFEMNKLVTGLDM 585
Query: 1250 KNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLTILIENMRRE--GYELSVSRPRVI 1307
N+ D ++ + V +N + + GE+HL ++++R E+ S+P V
Sbjct: 586 LNQADPCVQ----IAVEENGE----HVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVP 637
Query: 1308 FK 1309
++
Sbjct: 638 YR 639
Score = 71 (30.1 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 73 TIMGHVDHGKTSLLDYIRKTN-VVFSEAGGITQHI 106
T++ HVDHGKT+L D + +N ++ S+ G + +
Sbjct: 23 TLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFL 57
Score = 37 (18.1 bits), Expect = 4.9e-06, Sum P(4) = 4.9e-06
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 851 YLRRIGIDKLTLDKCL 866
Y +++G+ + L KCL
Sbjct: 237 YEKKLGLKQKALTKCL 252
>ASPGD|ASPL0000051985 [details] [associations]
symbol:AN0072 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=RCA] [GO:0004730 "pseudouridylate synthase activity"
evidence=RCA] [GO:0006400 "tRNA modification" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0001522
"pseudouridine synthesis" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] HAMAP:MF_01080 InterPro:IPR002501
InterPro:IPR014780 InterPro:IPR020103 Pfam:PF01509 EMBL:BN001308
GO:GO:0003723 GO:GO:0006396 EMBL:AACD01000003 eggNOG:COG0130
GO:GO:0009982 GO:GO:0001522 SUPFAM:SSF55120 KO:K03177 OMA:FAIEKPS
OrthoDB:EOG4V9Z0D PANTHER:PTHR13767 HOGENOM:HOG000176412
RefSeq:XP_657676.1 ProteinModelPortal:Q5BHA8 STRING:Q5BHA8
EnsemblFungi:CADANIAT00002680 GeneID:2875850 KEGG:ani:AN0072.2
Uniprot:Q5BHA8
Length = 392
Score = 209 (78.6 bits), Expect = 6.3e-17, Sum P(3) = 6.3e-17
Identities = 47/105 (44%), Positives = 62/105 (59%)
Query: 691 KVGYTGTLDPFATGLLPLCFGEATKFSNYLSEADKYYEAIIHLGITTETGDIEGKIIDFN 750
K+G+ GTLDP ATG+L G+ TKF N K YE ++ G T++ D GKI+
Sbjct: 68 KIGHGGTLDPLATGVLVTGVGKGTKFLNDFLGCTKTYETVVIFGAETDSYDRLGKIVRRA 127
Query: 751 KNIPNSIEIIEKILINFHGKISQIPPMYSALKYKGIPLYKYARSG 795
+ E +EK L F GKI Q PP++SALK +G LY+YAR G
Sbjct: 128 PYEHITREAVEKALEQFRGKIMQRPPIFSALKVQGKKLYEYAREG 172
Score = 69 (29.3 bits), Expect = 6.3e-17, Sum P(3) = 6.3e-17
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 818 PYLTLRIHCSKGTYIRVLSEDIGKMLG-CGAHLKYLRRIGIDKLTLDKCLNIDTIIKYSE 876
P + + + S G Y+R L+ D+GK LG CG +R D TL+ D I++Y +
Sbjct: 308 PAVKITMTVSSGFYVRSLAHDLGKALGSCGLMSALVRSRQAD-YTLEP----DKILEYKD 362
Query: 877 YE 878
+
Sbjct: 363 LD 364
Score = 53 (23.7 bits), Expect = 6.3e-17, Sum P(3) = 6.3e-17
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 659 KNIIHGVLLLDKPYGLSSNNALKKIKYLLNAKKV 692
+ I GV + KP G++S + ++K+++ N ++
Sbjct: 4 EKIYEGVFAVHKPQGVTSADVIRKLQHHFNPSEL 37
>TAIR|locus:2038555 [details] [associations]
symbol:MEE5 "AT1G06220" species:3702 "Arabidopsis
thaliana" [GO:0003746 "translation elongation factor activity"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISS] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IMP] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016607 "nuclear speck" evidence=IDA] [GO:0045694 "regulation
of embryo sac egg cell differentiation" evidence=IMP] [GO:0005829
"cytosol" evidence=RCA] InterPro:IPR000795 InterPro:IPR004161
InterPro:IPR005225 InterPro:IPR005517 Pfam:PF00009 Pfam:PF03144
Pfam:PF03764 PRINTS:PR00315 SMART:SM00889 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GO:GO:0005886 GO:GO:0005618 GO:GO:0016607 GO:GO:0003924
GO:GO:0006184 GO:GO:0009793 GO:GO:0003746 GO:GO:0030529
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AC025290 Gene3D:3.30.70.240 InterPro:IPR009000
SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838 SUPFAM:SSF54980
HOGENOM:HOG000231589 HSSP:P32324 KO:K12852 OMA:LGNVCFA
UniGene:At.15476 GO:GO:0045694 EMBL:AK226591 IPI:IPI00521033
PIR:H86197 RefSeq:NP_172112.1 RefSeq:NP_849600.1 UniGene:At.67274
ProteinModelPortal:Q9LNC5 SMR:Q9LNC5 IntAct:Q9LNC5 STRING:Q9LNC5
PRIDE:Q9LNC5 EnsemblPlants:AT1G06220.1 EnsemblPlants:AT1G06220.2
GeneID:837131 KEGG:ath:AT1G06220 TAIR:At1g06220 InParanoid:Q9LNC5
PhylomeDB:Q9LNC5 ProtClustDB:CLSN2682296 Genevestigator:Q9LNC5
Uniprot:Q9LNC5
Length = 987
Score = 198 (74.8 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 46/137 (33%), Positives = 75/137 (54%)
Query: 922 LIKS-AIIAHVDHGKTTLIDHLLRQS---GTFRKNQNINARIMDSNEIEKERGITIFSKN 977
L+++ A++ H+ HGKT +D L+ Q+ TF + + D+ E+ER I+I +
Sbjct: 137 LVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDEQERNISIKAVP 196
Query: 978 CSIEYNGTR-----INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRK 1032
S+ +R NI+DTPGH +F E+ L + D +L++DA EG M T R
Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRH 256
Query: 1033 ALKLGFKPIVVVNKIDR 1049
A++ +VV+NK+DR
Sbjct: 257 AIQDHLPIVVVINKVDR 273
Score = 128 (50.1 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 121 LDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQTREAIAHAKISGVPLIVAINKIDK 180
+DTPGH F+ ++ D VL+V A +GVM T AI HA +P++V INK+D+
Sbjct: 214 MDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKVDR 273
Query: 181 L 181
L
Sbjct: 274 L 274
Score = 107 (42.7 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 45/218 (20%), Positives = 103/218 (47%)
Query: 1102 PLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGI-GRILSGRIKSLQDVVIMN-- 1158
P++E++++ P + PL + + L S + GR+ SGR+++ Q V ++
Sbjct: 474 PIYESMVECDP------SGPLMVNVTKLYPKSDTSVFDVFGRVYSGRLQTGQSVRVLGEG 527
Query: 1159 -GPDDKPNKA--KINQIRVFKGLDRVLVNEALSGDIVLITGIE-EICIGSTICDPSKPNG 1214
P+D+ + ++ ++ +++ R+ V+ A G VLI G++ I +T+C+ S
Sbjct: 528 YSPEDEEDMTIKEVTKLWIYQARYRIPVSSAPPGSWVLIEGVDASIMKTATLCNASYDED 587
Query: 1215 LPMLNIDEPTLTINFMVNNSPLAGREGKFITTRQIKNRLD--HEIKNNIGLRVTQNKHDD 1272
+ + + F N P+ + + ++ ++ +I + L +T+ +
Sbjct: 588 VYIFR------ALQF--NTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESG 639
Query: 1273 SIYEVSGRGELHLTILIENMRR--EGYELSVSRPRVIF 1308
+ + G GEL+L +++++R E+ V+ P V F
Sbjct: 640 E-HTILGTGELYLDSIMKDLRELYSEVEVKVADPVVSF 676
Score = 54 (24.1 bits), Expect = 5.0e-10, Sum P(3) = 5.0e-10
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 65 SLVRAPIVTIMGHVDHGKTSLLDYI 89
+LVR V ++GH+ HGKT +D +
Sbjct: 136 ALVRN--VALVGHLQHGKTVFMDML 158
>UNIPROTKB|E1BH79 [details] [associations]
symbol:EFTUD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043022 "ribosome binding" evidence=IEA] [GO:0042256
"mature ribosome assembly" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR000795 InterPro:IPR004161 InterPro:IPR005225
Pfam:PF00009 Pfam:PF03144 PRINTS:PR00315 InterPro:IPR000640
Pfam:PF00679 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924
GO:GO:0043022 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0042256 Gene3D:3.30.70.240
InterPro:IPR009000 SUPFAM:SSF50447 InterPro:IPR009022 SMART:SM00838
SUPFAM:SSF54980 CTD:79631 KO:K14536 OMA:MYTCEIM
GeneTree:ENSGT00550000074806 EMBL:DAAA02052248 EMBL:DAAA02052249
IPI:IPI00839494 RefSeq:XP_002696652.1 Ensembl:ENSBTAT00000047037
GeneID:527607 KEGG:bta:527607 NextBio:20874634 Uniprot:E1BH79
Length = 1129
Score = 271 (100.5 bits), Expect = 8.1e-17, Sum P(3) = 8.1e-17
Identities = 57/127 (44%), Positives = 79/127 (62%)
Query: 927 IIAHVDHGKTTLIDHLLRQSGTFRKNQNINARIMDSNEIEKERGITIFSKNCSIEY-NGT 985
++AHVDHGKTTL D L+ +G R MDS E E+ RGIT+ S S+ Y G
Sbjct: 24 VLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSREDEQVRGITMKSSAISLHYAEGD 83
Query: 986 R---INIIDTPGHADFGGEVERILSMVDNVLLLIDAVEGPMPQTRFVTRKALKLGFKPIV 1042
+ IN+ID+PGH DF EV + + D ++++DAVEG PQT+ V R+A +P++
Sbjct: 84 KEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQTQAVLRQAWLENIRPVL 143
Query: 1043 VVNKIDR 1049
V+NKIDR
Sbjct: 144 VINKIDR 150
Score = 123 (48.4 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 101 GITQHIGAYNVVTNHGS----ITFLDTPGHEAFTAMRARGAKVTDIVVLVVAADDGVMPQ 156
GIT A ++ G I +D+PGH F++ + ++ D ++VV A +GV PQ
Sbjct: 67 GITMKSSAISLHYAEGDKEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQ 126
Query: 157 TREAIAHAKISGVPLIVAINKIDKLDINLDRIKQDLIS 194
T+ + A + + ++ INKID+L + L Q+ S
Sbjct: 127 TQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYS 164
Score = 70 (29.7 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 53 LLNEYNKNITAE-SLVRAPIVTIMGHVDHGKTSLLDYIRKTNVVFS 97
+LN +K I + + + ++ HVDHGKT+L D + +N + S
Sbjct: 2 VLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIIS 47
Score = 45 (20.9 bits), Expect = 8.1e-17, Sum P(3) = 8.1e-17
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1248 QIKNRLDHEIKNNIGLRVTQNKHDDSIYEVSGRGELHLT 1286
Q+ + L+ E KNN ++ K + I+E G+ E HLT
Sbjct: 778 QLTSSLN-EGKNNP--QMIHQKTQEKIWEFKGKLEHHLT 813
Score = 42 (19.8 bits), Expect = 0.00042, Sum P(4) = 0.00042
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 484 VNKVSKIAGCYILEGLIRRDSKIRIL-RNK 512
+N V K G Y+ E ++ K R L +NK
Sbjct: 1100 MNAVRKRKGLYVEEKIVEHAEKQRTLSKNK 1129
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(4) = 0.00022
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 280 SYGRIRSMLNENGKNILEAGPSI-PVEIQGLTKVP 313
++ R+ S + GK I GP P+E L +VP
Sbjct: 507 AFARVFSGVARKGKRIFVLGPKYSPLEF--LQQVP 539
Score = 37 (18.1 bits), Expect = 8.1e-17, Sum P(3) = 8.1e-17
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 1099 NMIPLFEAILKYVPVHKDNSNNPLQLQIISLEYSSYLGKIGIGRILSGRIKSLQDVVIM 1157
N+ L++A+LK D L L+I + E K+ I I S + Q V+ M
Sbjct: 300 NIWSLYDAVLKKDKEKTDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISQAVLAM 358
Score = 37 (18.1 bits), Expect = 0.00053, Sum P(4) = 0.00053
Identities = 4/21 (19%), Positives = 13/21 (61%)
Query: 757 IEIIEKILINFHGKISQIPPM 777
+E ++++ + F + +PP+
Sbjct: 532 LEFLQQVPLGFSAPLEDLPPV 552
WARNING: HSPs involving 331 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1527 1454 0.00094 124 3 11 22 0.40 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 581
No. of states in DFA: 617 (66 KB)
Total size of DFA: 511 KB (2236 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 125.54u 0.13s 125.67t Elapsed: 00:00:26
Total cpu time: 125.67u 0.13s 125.80t Elapsed: 00:00:28
Start: Thu Aug 15 11:49:35 2013 End: Thu Aug 15 11:50:03 2013
WARNINGS ISSUED: 2