Query psy17586
Match_columns 106
No_of_seqs 103 out of 574
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 17:26:13 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17586.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17586hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ggt_A SCO1 protein homolog, m 98.5 5.1E-08 1.8E-12 65.8 3.6 57 22-79 107-163 (164)
2 2rli_A SCO2 protein homolog, m 98.4 2.3E-07 7.8E-12 63.1 4.3 58 22-80 110-167 (171)
3 4hde_A SCO1/SENC family lipopr 98.4 3.7E-07 1.3E-11 64.3 5.0 42 35-76 126-169 (170)
4 2b7k_A SCO1 protein; metalloch 98.3 1.3E-07 4.3E-12 67.9 1.9 68 22-89 124-196 (200)
5 3me7_A Putative uncharacterize 97.4 0.00027 9.4E-09 49.1 5.7 40 37-76 121-161 (170)
6 2r37_A Glutathione peroxidase 97.2 0.00056 1.9E-08 50.0 5.3 44 40-83 156-199 (207)
7 1xzo_A BSSCO, hypothetical pro 96.9 0.0011 3.8E-08 44.7 4.6 41 36-76 129-171 (174)
8 3ixr_A Bacterioferritin comigr 96.9 0.0012 4.2E-08 46.1 4.7 51 22-77 124-174 (179)
9 3kij_A Probable glutathione pe 96.8 0.0014 4.9E-08 45.3 4.5 39 42-80 135-173 (180)
10 2vup_A Glutathione peroxidase- 96.8 0.0013 4.6E-08 46.0 4.2 39 40-78 148-186 (190)
11 3gkn_A Bacterioferritin comigr 96.6 0.0024 8.2E-08 42.9 4.3 52 22-78 108-159 (163)
12 2v1m_A Glutathione peroxidase; 96.4 0.003 1E-07 42.2 3.9 38 40-77 130-167 (169)
13 3dwv_A Glutathione peroxidase- 96.4 0.0038 1.3E-07 43.6 4.3 38 40-77 146-183 (187)
14 2k6v_A Putative cytochrome C o 96.4 0.0015 5.1E-08 43.8 2.1 40 35-75 130-171 (172)
15 2f8a_A Glutathione peroxidase 96.3 0.0023 7.9E-08 46.3 3.2 39 39-77 169-207 (208)
16 2p5q_A Glutathione peroxidase 96.1 0.0037 1.3E-07 41.8 3.1 40 38-77 129-168 (170)
17 3cmi_A Peroxiredoxin HYR1; thi 96.1 0.0032 1.1E-07 43.0 2.8 40 38-77 123-168 (171)
18 3lor_A Thiol-disulfide isomera 96.1 0.0045 1.5E-07 41.0 3.2 42 37-78 115-156 (160)
19 2i3y_A Epididymal secretory gl 96.0 0.0048 1.6E-07 45.5 3.6 35 44-78 178-212 (215)
20 3lwa_A Secreted thiol-disulfid 96.0 0.0081 2.8E-07 41.1 4.4 40 38-77 142-181 (183)
21 2gs3_A PHGPX, GPX-4, phospholi 95.9 0.0031 1.1E-07 43.9 1.9 38 39-76 148-185 (185)
22 3or5_A Thiol:disulfide interch 95.9 0.0099 3.4E-07 39.3 4.3 42 39-80 113-154 (165)
23 3eyt_A Uncharacterized protein 95.8 0.0073 2.5E-07 40.0 3.5 41 37-77 112-152 (158)
24 2p31_A CL683, glutathione pero 95.6 0.0067 2.3E-07 42.0 2.6 39 38-76 135-180 (181)
25 3kh7_A Thiol:disulfide interch 95.6 0.015 5.2E-07 40.1 4.5 44 37-80 127-170 (176)
26 4evm_A Thioredoxin family prot 95.6 0.012 4.2E-07 36.9 3.6 38 37-74 99-136 (138)
27 2f9s_A Thiol-disulfide oxidore 95.6 0.012 4.1E-07 38.7 3.7 42 37-78 98-139 (151)
28 2b1k_A Thiol:disulfide interch 95.5 0.017 5.8E-07 38.7 4.4 45 37-81 120-164 (168)
29 3fw2_A Thiol-disulfide oxidore 95.5 0.019 6.5E-07 37.9 4.5 39 37-78 111-149 (150)
30 2b5x_A YKUV protein, TRXY; thi 95.5 0.014 4.9E-07 37.5 3.8 41 37-77 105-145 (148)
31 2l5o_A Putative thioredoxin; s 95.5 0.014 4.8E-07 38.2 3.7 43 37-79 101-143 (153)
32 2obi_A PHGPX, GPX-4, phospholi 95.4 0.0037 1.3E-07 43.2 0.8 37 39-75 146-182 (183)
33 2h30_A Thioredoxin, peptide me 95.3 0.0065 2.2E-07 40.3 1.7 42 37-78 116-157 (164)
34 3drn_A Peroxiredoxin, bacterio 95.2 0.04 1.4E-06 37.1 5.4 40 41-80 109-148 (161)
35 1zzo_A RV1677; thioredoxin fol 95.2 0.019 6.5E-07 36.3 3.6 40 37-77 96-135 (136)
36 1kng_A Thiol:disulfide interch 94.9 0.037 1.2E-06 36.2 4.4 41 38-78 113-153 (156)
37 3raz_A Thioredoxin-related pro 94.9 0.022 7.6E-07 37.6 3.4 40 40-79 103-142 (151)
38 2yzh_A Probable thiol peroxida 94.9 0.029 9.8E-07 38.2 4.0 35 42-76 132-171 (171)
39 3hcz_A Possible thiol-disulfid 94.9 0.034 1.2E-06 35.8 4.2 40 37-76 106-145 (148)
40 3fkf_A Thiol-disulfide oxidore 94.8 0.025 8.6E-07 36.4 3.4 38 37-77 109-146 (148)
41 1lu4_A Soluble secreted antige 94.7 0.028 9.5E-07 35.7 3.5 39 37-76 94-135 (136)
42 2lja_A Putative thiol-disulfid 94.7 0.032 1.1E-06 36.4 3.7 41 37-77 103-143 (152)
43 3ia1_A THIO-disulfide isomeras 94.5 0.032 1.1E-06 36.6 3.5 41 36-76 103-143 (154)
44 3f9u_A Putative exported cytoc 94.2 0.047 1.6E-06 37.1 3.8 44 38-81 126-170 (172)
45 2jsy_A Probable thiol peroxida 94.1 0.067 2.3E-06 35.9 4.4 34 43-76 128-166 (167)
46 2ywi_A Hypothetical conserved 94.0 0.055 1.9E-06 37.1 3.8 42 37-78 125-175 (196)
47 3ewl_A Uncharacterized conserv 93.8 0.06 2.1E-06 34.8 3.6 37 37-76 104-140 (142)
48 1we0_A Alkyl hydroperoxide red 93.7 0.075 2.6E-06 36.6 4.2 37 42-78 118-158 (187)
49 1n8j_A AHPC, alkyl hydroperoxi 93.6 0.14 4.8E-06 35.7 5.5 36 42-77 117-156 (186)
50 3ztl_A Thioredoxin peroxidase; 93.5 0.042 1.4E-06 39.7 2.7 39 42-80 159-197 (222)
51 3id6_A NOP5, PRE mRNA splicing 93.5 0.16 5.4E-06 39.7 6.0 38 38-75 5-42 (268)
52 3p7x_A Probable thiol peroxida 93.4 0.075 2.6E-06 36.0 3.7 33 42-74 128-165 (166)
53 3erw_A Sporulation thiol-disul 93.3 0.088 3E-06 33.6 3.7 36 37-72 109-144 (145)
54 2bmx_A Alkyl hydroperoxidase C 93.3 0.078 2.7E-06 36.9 3.7 41 37-77 121-170 (195)
55 1psq_A Probable thiol peroxida 92.8 0.12 4.1E-06 34.9 4.0 33 42-74 125-162 (163)
56 2lrn_A Thiol:disulfide interch 92.6 0.091 3.1E-06 34.6 3.2 38 37-77 104-141 (152)
57 1jfu_A Thiol:disulfide interch 92.6 0.11 3.8E-06 35.3 3.6 37 42-78 143-181 (186)
58 1zof_A Alkyl hydroperoxide-red 92.5 0.1 3.5E-06 36.4 3.4 41 37-77 112-161 (198)
59 3kcm_A Thioredoxin family prot 92.2 0.088 3E-06 34.3 2.6 43 37-79 101-145 (154)
60 2i81_A 2-Cys peroxiredoxin; st 91.9 0.26 8.8E-06 35.4 5.0 40 38-77 132-180 (213)
61 2hyx_A Protein DIPZ; thioredox 91.5 0.2 6.9E-06 39.5 4.5 44 37-80 159-202 (352)
62 3ha9_A Uncharacterized thiored 91.5 0.13 4.3E-06 34.2 2.8 39 37-76 125-163 (165)
63 2kuc_A Putative disulphide-iso 91.3 0.33 1.1E-05 30.9 4.6 40 37-76 81-120 (130)
64 2cvb_A Probable thiol-disulfid 91.2 0.12 4E-06 35.3 2.5 40 37-77 111-159 (188)
65 3qpm_A Peroxiredoxin; oxidored 91.1 0.14 4.9E-06 37.7 3.0 34 42-75 167-204 (240)
66 3u5r_E Uncharacterized protein 91.0 0.22 7.7E-06 35.5 3.9 42 37-78 138-188 (218)
67 1prx_A HORF6; peroxiredoxin, h 90.9 0.55 1.9E-05 34.2 6.0 36 42-77 130-169 (224)
68 2pn8_A Peroxiredoxin-4; thiore 90.8 0.56 1.9E-05 33.5 5.9 36 42-77 138-177 (211)
69 4gqc_A Thiol peroxidase, perox 90.7 0.53 1.8E-05 32.3 5.5 35 44-78 122-161 (164)
70 1uul_A Tryparedoxin peroxidase 90.6 0.33 1.1E-05 34.0 4.4 36 42-77 126-165 (202)
71 2c0d_A Thioredoxin peroxidase 90.5 0.43 1.5E-05 34.7 5.1 37 42-78 145-185 (221)
72 3gl3_A Putative thiol:disulfid 90.5 0.28 9.5E-06 31.8 3.7 40 37-76 100-141 (152)
73 2h01_A 2-Cys peroxiredoxin; th 90.3 0.37 1.3E-05 33.2 4.4 36 42-77 120-159 (192)
74 1xcc_A 1-Cys peroxiredoxin; un 90.3 0.56 1.9E-05 34.1 5.5 36 42-77 127-166 (220)
75 3pla_A NOP5, PRE mRNA splicing 90.3 0.48 1.6E-05 38.9 5.6 38 38-75 5-42 (388)
76 2ju5_A Thioredoxin disulfide i 90.1 0.4 1.4E-05 32.3 4.3 40 37-77 111-152 (154)
77 2v2g_A Peroxiredoxin 6; oxidor 89.3 0.82 2.8E-05 33.8 5.9 36 42-77 126-165 (233)
78 1zye_A Thioredoxin-dependent p 89.2 0.22 7.7E-06 35.8 2.7 35 42-76 146-184 (220)
79 1xvw_A Hypothetical protein RV 89.2 0.28 9.6E-06 32.3 2.9 32 45-76 124-155 (160)
80 2l57_A Uncharacterized protein 88.4 0.54 1.8E-05 29.8 3.8 40 37-76 77-116 (126)
81 3tjj_A Peroxiredoxin-4; thiore 88.2 0.29 9.8E-06 36.7 2.7 33 42-74 181-217 (254)
82 1q98_A Thiol peroxidase, TPX; 87.3 0.44 1.5E-05 32.1 3.0 19 42-60 129-147 (165)
83 3zrd_A Thiol peroxidase; oxido 87.2 0.64 2.2E-05 33.0 3.9 18 42-59 164-181 (200)
84 2lrt_A Uncharacterized protein 87.0 0.54 1.9E-05 31.2 3.3 34 37-70 108-141 (152)
85 4g2e_A Peroxiredoxin; redox pr 86.7 1 3.5E-05 30.4 4.6 30 44-73 120-154 (157)
86 4fo5_A Thioredoxin-like protei 86.6 0.36 1.2E-05 31.3 2.2 33 37-72 108-140 (143)
87 2a4v_A Peroxiredoxin DOT5; yea 86.2 0.79 2.7E-05 30.4 3.8 34 45-79 120-156 (159)
88 1qmv_A Human thioredoxin perox 86.2 0.91 3.1E-05 31.4 4.2 35 42-76 124-162 (197)
89 1sen_A Thioredoxin-like protei 86.2 0.91 3.1E-05 31.0 4.2 50 37-86 96-157 (164)
90 1xvq_A Thiol peroxidase; thior 85.6 0.65 2.2E-05 31.7 3.2 19 42-60 128-146 (175)
91 4eo3_A Bacterioferritin comigr 83.6 1.3 4.5E-05 34.2 4.5 32 45-76 104-138 (322)
92 3eur_A Uncharacterized protein 83.5 1.3 4.5E-05 28.5 3.8 32 36-70 107-138 (142)
93 2dlx_A UBX domain-containing p 83.4 1.2 4.2E-05 31.1 3.9 43 37-80 96-139 (153)
94 3hdc_A Thioredoxin family prot 83.4 0.97 3.3E-05 29.7 3.2 37 37-73 110-148 (158)
95 3a2v_A Probable peroxiredoxin; 82.8 1.6 5.5E-05 32.8 4.6 46 42-87 123-174 (249)
96 3hxs_A Thioredoxin, TRXP; elec 82.7 0.71 2.4E-05 29.7 2.3 40 37-77 100-139 (141)
97 2l5l_A Thioredoxin; structural 81.5 1.8 6.2E-05 28.0 3.9 39 37-76 87-125 (136)
98 3tco_A Thioredoxin (TRXA-1); d 79.9 1.6 5.5E-05 26.2 3.1 39 37-76 70-108 (109)
99 1thx_A Thioredoxin, thioredoxi 79.7 1.8 6.1E-05 26.4 3.2 40 37-77 74-113 (115)
100 3fk8_A Disulphide isomerase; A 79.4 2.6 8.7E-05 26.8 4.1 39 37-75 83-131 (133)
101 2e0q_A Thioredoxin; electron t 77.8 3.1 0.00011 24.5 3.9 39 37-76 64-102 (104)
102 2l6o_A Uncharacterized protein 77.7 6.8 0.00023 26.9 6.0 54 35-91 47-101 (114)
103 3tue_A Tryparedoxin peroxidase 77.7 1.5 5.1E-05 32.8 2.9 32 44-75 148-183 (219)
104 2fwh_A Thiol:disulfide interch 77.4 1.3 4.4E-05 28.7 2.2 38 37-74 86-125 (134)
105 2trx_A Thioredoxin; electron t 76.4 3.4 0.00012 24.9 3.8 39 37-76 69-107 (108)
106 3keb_A Probable thiol peroxida 76.2 5.9 0.0002 29.5 5.8 36 42-77 136-176 (224)
107 3sbc_A Peroxiredoxin TSA1; alp 75.6 1.7 5.9E-05 32.4 2.7 32 44-75 144-179 (216)
108 2lst_A Thioredoxin; structural 76.9 0.6 2.1E-05 29.7 0.0 44 36-79 72-118 (130)
109 2ls5_A Uncharacterized protein 76.3 0.65 2.2E-05 30.5 0.0 35 40-75 112-146 (159)
110 1x5d_A Protein disulfide-isome 73.3 5.9 0.0002 24.7 4.5 42 37-79 78-119 (133)
111 3hvz_A Uncharacterized protein 73.3 5.1 0.00017 25.4 4.1 34 44-78 6-39 (78)
112 2lus_A Thioredoxion; CR-Trp16, 74.7 0.77 2.6E-05 29.2 0.0 27 36-62 102-128 (143)
113 2dml_A Protein disulfide-isome 71.6 5.1 0.00017 25.1 3.9 42 37-78 84-125 (130)
114 3gnj_A Thioredoxin domain prot 71.4 4.3 0.00015 24.5 3.4 40 37-77 71-110 (111)
115 2ec4_A FAS-associated factor 1 71.3 9.1 0.00031 27.3 5.6 45 38-82 126-173 (178)
116 2i4a_A Thioredoxin; acidophIle 70.5 3.1 0.00011 24.9 2.6 37 37-74 69-105 (107)
117 2o8v_B Thioredoxin 1; disulfid 70.4 5.5 0.00019 25.6 3.9 40 36-76 88-127 (128)
118 3hz4_A Thioredoxin; NYSGXRC, P 69.3 7.9 0.00027 25.0 4.5 43 37-80 73-115 (140)
119 1dby_A Chloroplast thioredoxin 68.8 5.8 0.0002 23.8 3.6 39 37-76 68-106 (107)
120 1nsw_A Thioredoxin, TRX; therm 68.0 2 6.8E-05 25.9 1.3 38 37-75 66-103 (105)
121 1w4v_A Thioredoxin, mitochondr 67.7 6.8 0.00023 24.5 3.8 39 37-76 80-118 (119)
122 2yzu_A Thioredoxin; redox prot 67.5 3 0.0001 24.8 2.0 39 37-76 67-105 (109)
123 3die_A Thioredoxin, TRX; elect 64.8 4.4 0.00015 24.1 2.4 38 37-75 68-105 (106)
124 3p2a_A Thioredoxin 2, putative 63.8 9.8 0.00034 24.6 4.1 40 37-77 104-143 (148)
125 1fb6_A Thioredoxin M; electron 63.0 5.6 0.00019 23.6 2.6 38 37-75 67-104 (105)
126 1t00_A Thioredoxin, TRX; redox 62.8 7.8 0.00027 23.5 3.3 39 37-76 72-110 (112)
127 2pu9_C TRX-F, thioredoxin F-ty 61.7 12 0.00041 22.7 4.1 38 37-76 73-110 (111)
128 1tp9_A Peroxiredoxin, PRX D (t 60.0 6.2 0.00021 26.3 2.7 22 39-61 124-145 (162)
129 4euy_A Uncharacterized protein 59.9 8 0.00028 23.4 3.0 40 36-76 65-104 (105)
130 3d22_A TRXH4, thioredoxin H-ty 59.6 11 0.00037 23.9 3.7 39 37-77 94-132 (139)
131 3qfa_C Thioredoxin; protein-pr 59.6 9.9 0.00034 23.7 3.5 37 37-75 79-115 (116)
132 1ep7_A Thioredoxin CH1, H-type 59.4 12 0.0004 22.5 3.7 38 37-76 73-110 (112)
133 1oaz_A Thioredoxin 1; immune s 58.7 4.6 0.00016 25.9 1.8 39 36-75 83-121 (123)
134 3m9j_A Thioredoxin; oxidoreduc 57.4 9.3 0.00032 22.6 2.9 37 37-75 68-104 (105)
135 1v98_A Thioredoxin; oxidoreduc 57.2 13 0.00045 23.7 3.8 39 37-76 99-137 (140)
136 3ey7_A Biphenyl-2,3-DIOL 1,2-d 56.8 9.5 0.00032 23.3 3.0 19 44-62 113-131 (133)
137 2dj1_A Protein disulfide-isome 54.9 14 0.00048 23.2 3.7 38 37-76 86-123 (140)
138 1r9c_A Glutathione transferase 54.2 9 0.00031 24.2 2.6 22 42-63 103-124 (139)
139 3m2o_A Glyoxalase/bleomycin re 54.1 9 0.00031 25.4 2.7 27 44-70 127-153 (164)
140 1ti3_A Thioredoxin H, PTTRXH1; 54.1 11 0.00039 22.6 2.9 39 37-77 74-112 (113)
141 1f9z_A Glyoxalase I; beta-alph 53.7 9.8 0.00034 23.4 2.7 19 45-63 110-128 (135)
142 2ppt_A Thioredoxin-2; thiredox 53.7 15 0.00053 24.4 3.8 40 37-77 113-152 (155)
143 3sk2_A EHPR; antibiotic resist 53.5 11 0.00037 23.7 2.9 18 44-61 114-131 (132)
144 2vim_A Thioredoxin, TRX; thior 52.6 14 0.00048 21.7 3.2 37 37-75 67-103 (104)
145 3r6a_A Uncharacterized protein 52.5 9 0.00031 25.2 2.5 22 44-65 101-122 (144)
146 3ph9_A Anterior gradient prote 52.2 3.7 0.00013 28.3 0.5 42 37-78 95-146 (151)
147 4gym_A Glyoxalase/bleomycin re 51.9 10 0.00035 24.4 2.6 16 45-60 117-132 (149)
148 2nnw_A NOP5/NOP56 related prot 51.6 12 0.0004 30.4 3.4 36 37-72 13-48 (376)
149 3kol_A Oxidoreductase, glyoxal 51.3 13 0.00044 23.4 3.0 20 44-63 134-153 (156)
150 2za0_A Glyoxalase I; lyase, la 51.2 8.4 0.00029 25.8 2.2 22 44-65 160-181 (184)
151 3rhe_A NAD-dependent benzaldeh 51.2 9.3 0.00032 25.1 2.4 24 44-67 106-129 (148)
152 3fhk_A UPF0403 protein YPHP; d 51.0 20 0.00068 25.8 4.2 36 43-79 107-146 (147)
153 2vm1_A Thioredoxin, thioredoxi 51.0 19 0.00066 21.6 3.7 39 37-77 76-114 (118)
154 1xwb_A Thioredoxin; dimerizati 50.4 13 0.00045 21.9 2.8 37 37-75 69-105 (106)
155 2es7_A Q8ZP25_salty, putative 50.2 13 0.00044 25.0 3.0 41 37-78 86-126 (142)
156 3itw_A Protein TIOX; bleomycin 50.1 12 0.0004 23.6 2.6 25 44-68 105-131 (137)
157 3dml_A Putative uncharacterize 49.9 34 0.0012 22.8 5.1 43 36-79 70-112 (116)
158 3f3q_A Thioredoxin-1; His TAG, 49.9 16 0.00054 22.4 3.2 37 37-75 72-108 (109)
159 2voc_A Thioredoxin; electron t 49.7 9.6 0.00033 23.4 2.1 37 37-74 66-102 (112)
160 2yj7_A LPBCA thioredoxin; oxid 55.0 3.5 0.00012 24.3 0.0 39 36-75 67-105 (106)
161 1r26_A Thioredoxin; redox-acti 49.3 16 0.00054 23.4 3.2 39 37-77 85-123 (125)
162 3g12_A Putative lactoylglutath 48.8 12 0.00041 23.8 2.6 20 45-64 104-123 (128)
163 2vlu_A Thioredoxin, thioredoxi 48.6 21 0.00072 21.8 3.6 38 37-76 82-119 (122)
164 3uvt_A Thioredoxin domain-cont 47.3 25 0.00085 20.8 3.8 37 37-74 73-109 (111)
165 2p7o_A Glyoxalase family prote 47.0 18 0.0006 22.3 3.1 21 43-63 104-124 (133)
166 2wz9_A Glutaredoxin-3; protein 46.8 18 0.00062 23.7 3.3 39 37-77 80-118 (153)
167 3huh_A Virulence protein STM31 46.1 15 0.00051 23.5 2.7 20 44-63 126-145 (152)
168 2p25_A Glyoxalase family prote 45.9 15 0.00053 22.0 2.6 16 44-59 110-125 (126)
169 3lqn_A CBS domain protein; csg 45.8 23 0.00079 22.5 3.6 38 38-80 112-149 (150)
170 3emx_A Thioredoxin; structural 45.8 20 0.00069 22.9 3.3 42 37-79 87-128 (135)
171 3apq_A DNAJ homolog subfamily 45.5 24 0.00083 24.3 3.9 40 37-77 163-202 (210)
172 3kzq_A Putative uncharacterize 45.4 22 0.00074 24.6 3.7 36 44-79 170-205 (208)
173 1faa_A Thioredoxin F; electron 45.4 23 0.0008 21.7 3.5 37 37-75 86-122 (124)
174 3l7t_A SMU.1112C, putative unc 45.2 16 0.00055 22.0 2.6 17 43-59 117-133 (134)
175 1x5e_A Thioredoxin domain cont 45.2 10 0.00034 23.7 1.7 49 37-88 72-120 (126)
176 3d6i_A Monothiol glutaredoxin- 45.1 34 0.0012 20.5 4.2 39 37-77 71-109 (112)
177 2pjs_A AGR_C_3564P, uncharacte 44.7 17 0.00057 22.0 2.7 18 44-61 101-118 (119)
178 3uh9_A Metallothiol transferas 44.6 18 0.00063 22.8 3.0 21 42-62 100-120 (145)
179 3rri_A Glyoxalase/bleomycin re 44.5 13 0.00046 23.0 2.2 19 44-62 111-129 (135)
180 3zw5_A Glyoxalase domain-conta 44.2 17 0.00057 23.4 2.7 16 45-60 131-146 (147)
181 3ghj_A Putative integron gene 44.1 17 0.00057 23.3 2.7 18 43-60 123-140 (141)
182 1mek_A Protein disulfide isome 44.1 7.9 0.00027 23.3 1.0 38 37-75 76-115 (120)
183 1nki_A Probable fosfomycin res 43.7 31 0.0011 21.5 4.0 21 42-62 95-115 (135)
184 3e5d_A Putative glyoxalase I; 43.6 17 0.00058 22.0 2.6 16 44-59 111-126 (127)
185 3cxg_A Putative thioredoxin; m 43.6 19 0.00065 23.1 2.9 39 37-76 87-128 (133)
186 2xc2_A Thioredoxinn; oxidoredu 43.0 24 0.00082 21.5 3.3 37 37-75 80-116 (117)
187 2qqz_A Glyoxalase family prote 42.7 17 0.00057 22.4 2.5 18 44-61 107-124 (126)
188 2o16_A Acetoin utilization pro 42.7 44 0.0015 21.8 4.7 41 44-89 110-150 (160)
189 1yav_A Hypothetical protein BS 42.4 29 0.00099 22.4 3.7 40 41-85 114-153 (159)
190 2l6c_A Thioredoxin; oxidoreduc 42.4 27 0.00094 21.3 3.4 38 37-75 67-104 (110)
191 1syr_A Thioredoxin; SGPP, stru 41.8 16 0.00055 22.2 2.3 37 37-75 74-110 (112)
192 3ul3_B Thioredoxin, thioredoxi 41.8 18 0.00063 22.7 2.6 36 37-73 91-126 (128)
193 3ct8_A Protein BH2160, putativ 41.6 20 0.0007 23.1 2.9 17 44-60 129-145 (146)
194 1xqa_A Glyoxalase/bleomycin re 41.5 17 0.00059 21.8 2.3 17 43-59 96-112 (113)
195 1ecs_A Bleomycin resistance pr 41.3 23 0.00078 21.9 3.0 21 44-64 102-122 (126)
196 1j2r_A Hypothetical isochorism 41.1 25 0.00086 24.5 3.4 47 43-89 19-65 (199)
197 1xrk_A Bleomycin resistance pr 40.6 21 0.00072 22.1 2.7 18 44-61 104-121 (124)
198 2a67_A Isochorismatase family 40.0 40 0.0014 23.0 4.3 46 43-88 4-49 (167)
199 2rk0_A Glyoxalase/bleomycin re 39.6 21 0.00072 22.3 2.6 18 44-61 110-127 (136)
200 3ira_A Conserved protein; meth 39.5 31 0.0011 24.3 3.7 42 39-80 101-147 (173)
201 3s9f_A Tryparedoxin; thioredox 39.2 13 0.00045 24.8 1.6 23 37-59 123-146 (165)
202 3aps_A DNAJ homolog subfamily 39.0 8.3 0.00028 23.8 0.6 43 37-79 70-115 (122)
203 1qto_A Bleomycin-binding prote 38.8 25 0.00084 21.7 2.8 18 44-61 104-121 (122)
204 2j23_A Thioredoxin; immune pro 38.3 28 0.00096 21.6 3.0 38 37-76 83-120 (121)
205 2i5i_A UPF0249 protein EF_3048 37.8 19 0.00064 27.0 2.4 38 48-86 84-124 (263)
206 2p9r_A Alpha-2-M, alpha-2-macr 37.7 65 0.0022 20.0 4.8 45 8-58 4-52 (102)
207 1xiy_A Peroxiredoxin, pfaop; a 37.7 41 0.0014 23.7 4.1 16 44-60 137-152 (182)
208 1npb_A Fosfomycin-resistance p 37.4 27 0.00092 22.0 2.9 20 43-62 99-118 (141)
209 3gix_A Thioredoxin-like protei 37.3 42 0.0015 22.1 4.0 42 37-79 72-123 (149)
210 3fcd_A Lyase, ORF125EGC139; la 37.1 22 0.00075 22.4 2.4 21 44-64 107-127 (134)
211 3e0r_A C3-degrading proteinase 36.9 25 0.00085 27.0 3.0 25 38-62 101-125 (244)
212 2rk9_A Glyoxalase/bleomycin re 36.7 26 0.00088 22.2 2.7 19 44-62 118-136 (145)
213 3r4q_A Lactoylglutathione lyas 35.6 21 0.00072 23.4 2.2 20 43-62 114-133 (160)
214 1xfl_A Thioredoxin H1; AT3G510 35.3 31 0.0011 21.7 2.9 38 37-76 86-123 (124)
215 2vlg_A Sporulation kinase A; h 35.3 47 0.0016 20.8 3.8 29 40-68 5-39 (111)
216 3hdp_A Glyoxalase-I; glutathio 35.3 25 0.00086 21.6 2.4 17 44-60 116-132 (133)
217 1i5g_A Tryparedoxin II; electr 35.1 17 0.00058 23.0 1.6 23 37-59 103-126 (144)
218 2qnt_A AGR_C_3434P, uncharacte 34.8 32 0.0011 21.4 2.9 19 44-62 110-128 (141)
219 3mng_A Peroxiredoxin-5, mitoch 34.0 35 0.0012 23.5 3.2 19 44-63 139-157 (173)
220 3bqx_A Glyoxalase-related enzy 33.9 32 0.0011 22.0 2.8 19 44-62 109-127 (150)
221 4hc5_A Glyoxalase/bleomycin re 33.3 30 0.001 20.9 2.5 17 44-60 116-132 (133)
222 2rbb_A Glyoxalase/bleomycin re 33.0 30 0.001 21.7 2.6 20 43-62 114-133 (141)
223 3bt3_A Glyoxalase-related enzy 33.0 26 0.00091 22.3 2.3 18 44-61 127-144 (148)
224 1gh2_A Thioredoxin-like protei 32.7 54 0.0019 19.4 3.6 38 37-76 69-106 (107)
225 1o73_A Tryparedoxin; electron 32.7 19 0.00065 22.6 1.5 23 37-59 103-126 (144)
226 3vw9_A Lactoylglutathione lyas 32.6 27 0.00093 23.1 2.4 18 45-62 164-181 (187)
227 3h5i_A Response regulator/sens 32.4 81 0.0028 19.4 4.6 33 55-87 101-133 (140)
228 2i1u_A Thioredoxin, TRX, MPT46 32.4 13 0.00044 22.7 0.6 38 37-75 79-116 (121)
229 2r6u_A Uncharacterized protein 32.3 29 0.001 22.5 2.5 19 44-62 127-145 (148)
230 1o8x_A Tryparedoxin, TRYX, TXN 32.0 21 0.0007 22.7 1.6 23 37-59 103-126 (146)
231 4g6x_A Glyoxalase/bleomycin re 31.5 33 0.0011 22.2 2.6 18 44-61 134-151 (155)
232 3txy_A Isochorismatase family 31.4 25 0.00087 24.8 2.2 50 40-89 10-59 (199)
233 2a4x_A Mitomycin-binding prote 30.4 37 0.0013 21.2 2.6 19 44-62 111-129 (138)
234 2i7r_A Conserved domain protei 29.6 28 0.00096 21.0 1.9 17 44-60 100-116 (118)
235 4ghg_A Homoprotocatechuate 2,3 29.6 32 0.0011 26.6 2.6 23 41-63 251-273 (365)
236 1ss4_A Glyoxalase family prote 29.2 21 0.00071 22.4 1.2 18 44-61 132-149 (153)
237 1nm3_A Protein HI0572; hybrid, 28.8 58 0.002 22.8 3.7 29 44-73 126-163 (241)
238 3v67_A Sensor protein CPXA; PA 28.1 45 0.0015 23.1 2.9 44 44-90 56-101 (138)
239 1twu_A Hypothetical protein YY 28.0 42 0.0014 21.0 2.6 16 46-61 118-133 (139)
240 2kzb_A Autophagy-related prote 27.9 85 0.0029 21.5 4.2 52 4-64 39-104 (118)
241 2kjz_A ATC0852; protein of unk 27.7 31 0.0011 22.2 1.9 18 43-60 124-141 (144)
242 2w3g_A DOSS, two component sen 27.5 77 0.0026 19.1 3.7 26 43-68 26-51 (153)
243 4h17_A Hydrolase, isochorismat 27.1 57 0.002 23.0 3.4 46 43-88 23-68 (197)
244 3lif_A Putative diguanylate cy 26.8 45 0.0015 23.0 2.8 23 40-62 163-185 (254)
245 1wlx_A Alpha-actinin 4; three- 26.7 37 0.0013 23.6 2.3 32 65-96 3-36 (129)
246 1p0z_A Sensor kinase CITA; tra 26.7 39 0.0013 21.8 2.3 16 43-58 50-65 (131)
247 3c8c_A Methyl-accepting chemot 26.5 40 0.0014 22.4 2.4 17 42-58 158-174 (240)
248 2r78_A Sensor protein; sensory 26.4 46 0.0016 19.8 2.5 14 45-58 23-36 (117)
249 2djj_A PDI, protein disulfide- 26.2 39 0.0013 20.5 2.1 37 39-75 78-115 (121)
250 4dah_A Sporulation kinase D; a 26.0 1E+02 0.0035 20.7 4.5 37 36-74 122-158 (217)
251 3kht_A Response regulator; PSI 26.0 96 0.0033 19.0 4.1 29 55-83 104-133 (144)
252 3mcw_A Putative hydrolase; iso 25.9 30 0.001 24.4 1.7 46 43-88 12-57 (198)
253 3t12_B Gliding protein MGLB; G 25.8 1.3E+02 0.0046 20.5 5.1 36 44-79 27-67 (136)
254 3eeq_A Putative cobalamin bios 25.7 90 0.0031 24.5 4.6 34 44-77 82-116 (336)
255 2dj3_A Protein disulfide-isome 25.7 61 0.0021 19.9 3.1 41 36-76 75-117 (133)
256 3a0s_A Sensor protein; PAS-fol 25.7 53 0.0018 17.2 2.4 14 44-57 3-16 (96)
257 3hcy_A Putative two-component 25.5 70 0.0024 19.8 3.3 24 43-66 23-46 (151)
258 1zma_A Bacterocin transport ac 25.5 66 0.0022 19.5 3.1 35 37-72 82-116 (118)
259 3hpy_A Catechol 2,3-dioxygenas 25.3 44 0.0015 24.1 2.6 21 43-63 253-273 (309)
260 3hb7_A Isochorismatase hydrola 25.2 21 0.0007 25.4 0.7 44 44-88 8-57 (204)
261 1yac_A Ycacgp, YCAC gene produ 25.2 69 0.0024 22.7 3.6 45 43-88 12-56 (208)
262 2yh5_A DAPX protein, BAMC; lip 25.0 1E+02 0.0036 20.8 4.3 32 43-78 88-119 (127)
263 2c21_A Trypanothione-dependent 24.9 48 0.0016 20.8 2.4 16 45-60 110-126 (144)
264 3lqy_A Putative isochorismatas 24.8 66 0.0023 22.3 3.4 46 43-88 7-56 (190)
265 3tg2_A Vibriobactin-specific i 24.4 42 0.0014 24.4 2.3 51 37-87 21-73 (223)
266 2ky6_A Mediator of RNA polymer 24.4 1.8E+02 0.0061 21.2 5.7 42 44-87 123-165 (166)
267 4gqw_A CBS domain-containing p 24.3 86 0.003 19.4 3.6 29 44-76 117-145 (152)
268 1je5_A Helix-destabilizing pro 24.0 39 0.0013 25.3 2.1 41 50-90 33-76 (206)
269 3f1p_A Endothelial PAS domain- 23.9 50 0.0017 19.1 2.3 19 40-58 6-24 (117)
270 3hu5_A Isochorismatase family 23.9 41 0.0014 23.8 2.1 46 43-88 8-55 (204)
271 1mpy_A Catechol 2,3-dioxygenas 23.7 58 0.002 23.3 3.0 20 44-63 252-271 (307)
272 3olo_A Two-component sensor hi 23.6 58 0.002 18.3 2.5 14 45-58 25-38 (118)
273 3eef_A N-carbamoylsarcosine am 23.4 25 0.00084 24.4 0.9 46 44-89 3-48 (182)
274 1im5_A 180AA long hypothetical 23.3 61 0.0021 22.2 2.9 44 44-87 4-48 (180)
275 1lgt_A Biphenyl-2,3-DIOL 1,2-d 23.1 57 0.002 23.2 2.8 19 45-63 247-265 (297)
276 3uma_A Hypothetical peroxiredo 23.1 70 0.0024 22.1 3.2 18 44-62 150-167 (184)
277 3lm4_A Catechol 2,3-dioxygenas 23.1 52 0.0018 24.5 2.7 18 44-61 256-273 (339)
278 3oaj_A Putative ring-cleaving 22.7 20 0.00068 27.3 0.2 52 40-97 247-302 (335)
279 3hrz_A Cobra venom factor; ser 22.4 83 0.0028 26.3 4.0 46 7-58 105-153 (627)
280 3by9_A Sensor protein; histidi 22.4 58 0.002 22.2 2.6 18 41-58 161-178 (260)
281 2xhf_A Peroxiredoxin 5; oxidor 22.2 60 0.0021 22.7 2.7 19 44-63 135-153 (171)
282 2hr0_A Complement C3 beta chai 22.1 1.1E+02 0.0038 25.1 4.7 45 8-58 108-155 (645)
283 3bwl_A Sensor protein; structu 21.9 66 0.0022 18.7 2.5 14 45-58 29-42 (126)
284 3cwf_A Alkaline phosphatase sy 21.8 53 0.0018 20.6 2.2 16 44-59 49-64 (122)
285 1ryp_G 20S proteasome; multica 21.6 2.3E+02 0.0079 20.4 6.0 16 42-57 140-155 (244)
286 3kxr_A Magnesium transporter, 21.5 57 0.002 22.8 2.5 19 42-60 87-105 (205)
287 1a8l_A Protein disulfide oxido 21.5 1.1E+02 0.0037 20.7 3.9 39 37-76 187-225 (226)
288 2e67_A Hypothetical protein TT 21.4 24 0.00084 26.4 0.5 35 48-82 81-118 (264)
289 1f1u_A Homoprotocatechuate 2,3 21.4 70 0.0024 23.5 3.0 21 43-63 253-273 (323)
290 3dxb_A Thioredoxin N-terminall 21.2 94 0.0032 21.5 3.6 41 36-77 78-118 (222)
291 3no2_A Uncharacterized protein 21.2 1.2E+02 0.0041 21.7 4.2 28 35-62 47-74 (276)
292 3fc7_A HTR-like protein, senso 21.2 64 0.0022 18.4 2.3 20 39-58 24-44 (125)
293 2hz5_A Dynein light chain 2A, 21.2 1.1E+02 0.0038 20.2 3.8 37 44-80 28-64 (106)
294 2qv0_A Protein MRKE; structura 21.1 1.1E+02 0.0039 18.6 3.6 28 56-83 105-132 (143)
295 3fbz_A ORF140, putative unchar 21.0 50 0.0017 23.2 2.0 40 63-102 29-71 (140)
296 2l7q_A Conserved protein found 20.7 1E+02 0.0035 21.5 3.6 32 20-58 78-109 (124)
297 4dvc_A Thiol:disulfide interch 20.6 1E+02 0.0036 19.9 3.5 37 38-77 146-182 (184)
298 2oe3_A Thioredoxin-3; electron 20.5 60 0.0021 20.0 2.2 35 37-73 78-112 (114)
299 2zay_A Response regulator rece 20.5 98 0.0033 19.0 3.2 28 56-83 106-133 (147)
300 3ot4_A Putative isochorismatas 20.4 49 0.0017 24.3 2.0 49 40-88 41-90 (236)
301 4fxk_A Complement C4 beta chai 20.4 1.3E+02 0.0046 24.2 4.7 46 8-59 122-170 (656)
302 2ef7_A Hypothetical protein ST 20.2 1.4E+02 0.0046 18.2 3.9 29 44-76 99-127 (133)
303 2b34_A F35G2.2, MAR1 ribonucle 20.2 76 0.0026 22.4 2.9 43 43-88 14-56 (199)
304 3hv2_A Response regulator/HD d 20.2 1.4E+02 0.0046 18.6 3.9 27 55-81 110-136 (153)
305 3qil_A Clathrin heavy chain 1; 20.1 41 0.0014 23.5 1.4 20 82-101 29-48 (125)
306 2l3b_A Conserved protein found 20.1 1.5E+02 0.0052 20.8 4.4 31 20-58 79-109 (130)
No 1
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.53 E-value=5.1e-08 Score=65.76 Aligned_cols=57 Identities=44% Similarity=0.666 Sum_probs=48.0
Q ss_pred EEEEEecccccCCCCceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHH
Q psy17586 22 YSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 22 y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~ 79 (106)
|+|.+.+.. ....++|+++|+..+||+||+|+++..+....++++|.+.|+.+|+++
T Consensus 107 ~~v~~~p~~-~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 163 (164)
T 2ggt_A 107 YRVYYSPGP-KDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMRPY 163 (164)
T ss_dssp TTCCEEEEE-ECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHGGG
T ss_pred cCeEEEecC-CCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHhc
Confidence 777666533 223568999999999999999999999988889999999999998765
No 2
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.41 E-value=2.3e-07 Score=63.10 Aligned_cols=58 Identities=33% Similarity=0.639 Sum_probs=49.0
Q ss_pred EEEEEecccccCCCCceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 22 YSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 22 y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
|+|.+.+.. ....++|.++|+..+||+||+|+++..+....+++++.+.|++++++++
T Consensus 110 ~~v~~~p~~-~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~~ 167 (171)
T 2rli_A 110 YRVYYNAGP-KDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAAFR 167 (171)
T ss_dssp SCCCCEECC-CCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHHHC
T ss_pred hCeEEEecC-CCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 888776533 2335689999999999999999999999888899999999999997664
No 3
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.38 E-value=3.7e-07 Score=64.30 Aligned_cols=42 Identities=26% Similarity=0.219 Sum_probs=36.0
Q ss_pred CCceeEecceeEEEEcCCCcEEEeecC--CCCHHHHHHHHHHHH
Q psy17586 35 IFWFQVDHTIIMYLIDPEGLFVDYYGQ--NKKPEEVSNSIIVNM 76 (106)
Q Consensus 35 ~~dY~VDHSa~iYLmDPdGrfv~~f~~--~~speeiAe~Ir~~l 76 (106)
..+|.|+||..+|||||+|+++..+.. ..+.++|+++|+.++
T Consensus 126 ~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 126 PENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp CTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred CCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 356899999999999999999998863 446789999999876
No 4
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.35 E-value=1.3e-07 Score=67.90 Aligned_cols=68 Identities=32% Similarity=0.579 Sum_probs=40.4
Q ss_pred EEEEEecccccCCCCceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH----hhh-cCCcch
Q psy17586 22 YSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE----NLK-KKSWFE 89 (106)
Q Consensus 22 y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~----~~~-~~~~~~ 89 (106)
|+|.+..++...++.+|+++|+..+||+||+|+++..+....+++++.+.|+++|+... +++ ...||+
T Consensus 124 ~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~~l~~~~~~~~~~~~~~~ 196 (200)
T 2b7k_A 124 YRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVKSYVPAEQRAKQKEAWYS 196 (200)
T ss_dssp TTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHHHCCCC------------
T ss_pred cCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHHHhhhhhhcchhHHHHHH
Confidence 77764333211224579999999999999999999999888888999999999997652 455 567875
No 5
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.41 E-value=0.00027 Score=49.09 Aligned_cols=40 Identities=23% Similarity=0.234 Sum_probs=32.3
Q ss_pred ceeEecceeEEEEcCCCcEEEee-cCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYY-GQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f-~~~~speeiAe~Ir~~l 76 (106)
+|.+.|+..+|||||+|+++..+ +...++++|.+.|+++.
T Consensus 121 ~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~ 161 (170)
T 3me7_A 121 GNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLAR 161 (170)
T ss_dssp TTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHT
T ss_pred CCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhh
Confidence 47899999999999999999765 44456788887777654
No 6
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.17 E-value=0.00056 Score=49.99 Aligned_cols=44 Identities=16% Similarity=0.320 Sum_probs=38.4
Q ss_pred EecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhh
Q psy17586 40 VDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLK 83 (106)
Q Consensus 40 VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~ 83 (106)
|.|....||||++|+++..+....+++++.+.|+.+|++.+..+
T Consensus 156 i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll~~~~~~~ 199 (207)
T 2r37_A 156 IRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQAALG 199 (207)
T ss_dssp CCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhhccccc
Confidence 56777899999999999999988899999999999998776544
No 7
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=96.92 E-value=0.0011 Score=44.68 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=34.3
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCCC--CHHHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQNK--KPEEVSNSIIVNM 76 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~~--speeiAe~Ir~~l 76 (106)
++|.+.|+..+||+|++|+++..+.... +++++.+.|++++
T Consensus 129 ~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 129 GEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAS 171 (174)
T ss_dssp SCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHT
T ss_pred CCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 4588999999999999999999876554 4788988888776
No 8
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=96.88 E-value=0.0012 Score=46.13 Aligned_cols=51 Identities=12% Similarity=0.184 Sum_probs=33.1
Q ss_pred EEEEEecccccCCCCceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 22 YSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 22 y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
|++++.+.. .+.+.++|+..+|||||+|+++..+ .+..++..++.|.+.|+
T Consensus 124 ~gv~~~~~~----~g~~~~~~~p~~~lID~~G~I~~~~-~~~~~~~~~~~il~~l~ 174 (179)
T 3ixr_A 124 FDVIKEKTM----YGRQVIGIERSTFLIGPTHRIVEAW-RQVKVPGHAEEVLNKLK 174 (179)
T ss_dssp TTCEEEECC----C--CEEEECCEEEEECTTSBEEEEE-CSCCSTTHHHHHHHHHH
T ss_pred cCCcccccc----cCcccCCcceEEEEECCCCEEEEEE-cCCCCCCCHHHHHHHHH
Confidence 777665321 3456678999999999999999988 44444444444444444
No 9
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=96.80 E-value=0.0014 Score=45.34 Aligned_cols=39 Identities=21% Similarity=0.376 Sum_probs=33.5
Q ss_pred cceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
|+..+||+|++|+++..+....+++++.+.|+++|++..
T Consensus 135 ~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~~~~ 173 (180)
T 3kij_A 135 WNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVI 173 (180)
T ss_dssp STTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHHHHH
T ss_pred ccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 444499999999999999988999999999999887654
No 10
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=96.77 E-value=0.0013 Score=45.97 Aligned_cols=39 Identities=15% Similarity=0.389 Sum_probs=33.5
Q ss_pred EecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 40 VDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 40 VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
++|...+||+|++|+++..+....+++++.+.|+.+|++
T Consensus 148 i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 186 (190)
T 2vup_A 148 IKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLES 186 (190)
T ss_dssp CCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHHC
T ss_pred ccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhh
Confidence 455558999999999999998888899999999998853
No 11
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=96.60 E-value=0.0024 Score=42.93 Aligned_cols=52 Identities=13% Similarity=0.233 Sum_probs=34.3
Q ss_pred EEEEEecccccCCCCceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 22 YSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 22 y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
|+++..... .+.+...|+..+||||++|+++..+ .+..++..++.|.+.|++
T Consensus 108 ~~v~~~~~~----~~~~~~~~~p~~~lid~~G~i~~~~-~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 108 FDVIKEKNM----YGKQVLGIERSTFLLSPEGQVVQAW-RKVKVAGHADAVLAALKA 159 (163)
T ss_dssp TTCEEEEEE----TTEEEEEECCEEEEECTTSCEEEEE-CSCCSTTHHHHHHHHHHH
T ss_pred hCCcccccc----ccccccCcceEEEEECCCCeEEEEE-cCCCcccCHHHHHHHHHH
Confidence 666554221 3446677899999999999999998 555554444555555543
No 12
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=96.44 E-value=0.003 Score=42.24 Aligned_cols=38 Identities=18% Similarity=0.392 Sum_probs=33.3
Q ss_pred EecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 40 VDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 40 VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
|.|...+||+|++|+++..+....+++++.+.|+++++
T Consensus 130 i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 130 IKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp CCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred ccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 56667899999999999999888889999999988875
No 13
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=96.37 E-value=0.0038 Score=43.64 Aligned_cols=38 Identities=16% Similarity=0.386 Sum_probs=32.5
Q ss_pred EecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 40 VDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 40 VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
|.|+..+||||++|+++..+....+++++.+.|+.+|+
T Consensus 146 iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 146 IKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp CCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred cccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 44555899999999999999988899999999998885
No 14
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=96.36 E-value=0.0015 Score=43.84 Aligned_cols=40 Identities=25% Similarity=0.357 Sum_probs=33.8
Q ss_pred CCceeEecceeEEEEcCCCcEEEeecCCC--CHHHHHHHHHHH
Q psy17586 35 IFWFQVDHTIIMYLIDPEGLFVDYYGQNK--KPEEVSNSIIVN 75 (106)
Q Consensus 35 ~~dY~VDHSa~iYLmDPdGrfv~~f~~~~--speeiAe~Ir~~ 75 (106)
...|.|.|...+||+| +|+++..+.... +++++.+.|+++
T Consensus 130 ~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 130 PGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp TTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred CCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 3569999999999999 999999887666 788888887764
No 15
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=96.34 E-value=0.0023 Score=46.30 Aligned_cols=39 Identities=15% Similarity=0.330 Sum_probs=34.8
Q ss_pred eEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 39 QVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 39 ~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|.|+..+||||++|+++..+....+++++.+.|+.+|+
T Consensus 169 ~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ll~ 207 (208)
T 2f8a_A 169 DVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLS 207 (208)
T ss_dssp CCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHC
T ss_pred ccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHHhh
Confidence 378888999999999999999888899999999988874
No 16
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=96.13 E-value=0.0037 Score=41.81 Aligned_cols=40 Identities=18% Similarity=0.311 Sum_probs=33.5
Q ss_pred eeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 38 FQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 38 Y~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
+.+.|+..+||+|++|+++..+....+++++.+.|+.+++
T Consensus 129 ~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 129 DDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp SCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 3456666899999999999999888889999998888764
No 17
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=96.11 E-value=0.0032 Score=42.95 Aligned_cols=40 Identities=20% Similarity=0.230 Sum_probs=33.3
Q ss_pred eeEecce------eEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 38 FQVDHTI------IMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 38 Y~VDHSa------~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
|-|.+.. .+||+|++|+++..+....+++++.+.|..+++
T Consensus 123 ~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 123 SGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp CCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred CCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4455555 899999999999998877889999999988874
No 18
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=96.06 E-value=0.0045 Score=40.96 Aligned_cols=42 Identities=10% Similarity=-0.024 Sum_probs=37.1
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
.|-|.....+||+|++|+++..+....+++++.+.|+.+|++
T Consensus 115 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 115 KYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp HTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred hcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 477888899999999999999988888999999999888853
No 19
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.05 E-value=0.0048 Score=45.46 Aligned_cols=35 Identities=17% Similarity=0.391 Sum_probs=31.1
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
-..||||++|+++..+....++++|.+.|+.+|++
T Consensus 178 pttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 178 FEKFLVGPDGIPVMRWSHRATVSSVKTDILAYLKQ 212 (215)
T ss_dssp TCEEEECTTSCEEEEECTTSCHHHHHHHHHHHGGG
T ss_pred ceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 46899999999999998888999999999988853
No 20
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=95.99 E-value=0.0081 Score=41.12 Aligned_cols=40 Identities=5% Similarity=-0.004 Sum_probs=35.6
Q ss_pred eeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 38 FQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 38 Y~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
|.|.+...+||+|++|+++..+....+++++.+.|+.+++
T Consensus 142 ~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 142 VPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp CCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 5678888899999999999998888899999999998875
No 21
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=95.89 E-value=0.0031 Score=43.91 Aligned_cols=38 Identities=21% Similarity=0.420 Sum_probs=32.3
Q ss_pred eEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 39 QVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 39 ~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.+.|...+||+|++|+++..+....+++++.+.|+++|
T Consensus 148 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 185 (185)
T 2gs3_A 148 AIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 185 (185)
T ss_dssp SCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHHC
T ss_pred cccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHhC
Confidence 36677799999999999999988888898888887653
No 22
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=95.88 E-value=0.0099 Score=39.34 Aligned_cols=42 Identities=7% Similarity=0.086 Sum_probs=35.5
Q ss_pred eEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 39 QVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 39 ~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
-|.+...+||+|++|+++..+....+++++.+.|+.++++..
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAKA 154 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC---
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhhc
Confidence 578889999999999999999888899999999999986553
No 23
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=95.85 E-value=0.0073 Score=39.97 Aligned_cols=41 Identities=17% Similarity=0.042 Sum_probs=36.4
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|.....+||+|++|+++..+....+++++.+.|..+++
T Consensus 112 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 112 AYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp HTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 47888899999999999999998888889999998888874
No 24
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=95.59 E-value=0.0067 Score=42.04 Aligned_cols=39 Identities=23% Similarity=0.358 Sum_probs=32.1
Q ss_pred eeEecce-------eEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 38 FQVDHTI-------IMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 38 Y~VDHSa-------~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
|.+.... .+||+|++|+++..+....+++++.+.|+++|
T Consensus 135 ~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 135 YLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp HHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred hhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 5566655 89999999999999988888999888887654
No 25
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=95.59 E-value=0.015 Score=40.11 Aligned_cols=44 Identities=14% Similarity=0.015 Sum_probs=38.4
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
.|-|.....+||+|++|+++..+....+++++.+.|..++++..
T Consensus 127 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~l~ 170 (176)
T 3kh7_A 127 DLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQLL 170 (176)
T ss_dssp HHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHHHHH
T ss_pred HcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 47777888899999999999998888899999999999987654
No 26
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=95.57 E-value=0.012 Score=36.91 Aligned_cols=38 Identities=16% Similarity=0.120 Sum_probs=32.9
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIV 74 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~ 74 (106)
.|-|.+...+||+|++|+.+..+....+++++.+.|+.
T Consensus 99 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 99 TYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp HTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred HcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 47788999999999999999998887888888887764
No 27
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=95.57 E-value=0.012 Score=38.71 Aligned_cols=42 Identities=17% Similarity=0.198 Sum_probs=36.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
.|-|.+...+||+|++|+.+..+....+++++.+.|+.++..
T Consensus 98 ~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 98 AYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp HTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred hcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhh
Confidence 478999999999999999999887777889998888887743
No 28
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=95.52 E-value=0.017 Score=38.74 Aligned_cols=45 Identities=20% Similarity=0.148 Sum_probs=38.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHh
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYEN 81 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~ 81 (106)
.|-|.....+||+|++|+.+..+....+++++.+.|+.++++.++
T Consensus 120 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~~ 164 (168)
T 2b1k_A 120 DLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYSK 164 (168)
T ss_dssp HHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHHHHHH
T ss_pred HcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 477778888999999999998887778899999999999977653
No 29
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=95.47 E-value=0.019 Score=37.89 Aligned_cols=39 Identities=13% Similarity=0.124 Sum_probs=33.7
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
.|-|.+...+||+|++|+++..+. +++++.+.|..++++
T Consensus 111 ~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~~ 149 (150)
T 3fw2_A 111 QYSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIVEE 149 (150)
T ss_dssp HTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHHHH
T ss_pred HcCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHHhc
Confidence 478889999999999999998874 788899988888754
No 30
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=95.47 E-value=0.014 Score=37.51 Aligned_cols=41 Identities=10% Similarity=0.162 Sum_probs=35.6
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|.....++|+|++|+.+..+....+++++.+.|+.+++
T Consensus 105 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 105 AFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp HTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred HhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 48888999999999999999988777788899988888774
No 31
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=95.45 E-value=0.014 Score=38.22 Aligned_cols=43 Identities=14% Similarity=0.044 Sum_probs=37.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~ 79 (106)
.|-|.....+||+|++|+++..+....+++++.+.|+.++...
T Consensus 101 ~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 101 AFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp HHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCC
T ss_pred HcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 4778889999999999999988887788999999999888654
No 32
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=95.42 E-value=0.0037 Score=43.22 Aligned_cols=37 Identities=22% Similarity=0.417 Sum_probs=30.7
Q ss_pred eEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 39 QVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 39 ~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|.|...+||+|++|+++..+....+++++.+.|+++
T Consensus 146 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 146 AIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp SCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred cccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 4777789999999999999998878888887766553
No 33
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=95.29 E-value=0.0065 Score=40.31 Aligned_cols=42 Identities=10% Similarity=-0.069 Sum_probs=34.9
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
.|-|...-.+||+|++|+.+..+....+.+++.+.|+.++.+
T Consensus 116 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 116 NLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp HTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTCC
T ss_pred HcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 477888899999999999999887777888888877776643
No 34
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=95.18 E-value=0.04 Score=37.13 Aligned_cols=40 Identities=18% Similarity=0.353 Sum_probs=29.0
Q ss_pred ecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 41 DHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 41 DHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
.|...+||+|++|+++..+.....+++.++.+.+.|++-+
T Consensus 109 ~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l~ 148 (161)
T 3drn_A 109 LPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQIK 148 (161)
T ss_dssp SCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHHH
T ss_pred cccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHhh
Confidence 3488899999999999998775555555555555665444
No 35
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=95.17 E-value=0.019 Score=36.27 Aligned_cols=40 Identities=15% Similarity=0.183 Sum_probs=32.8
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|...-.+||+|++|+.+ .+....+++++.+.|.++++
T Consensus 96 ~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 96 NFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTS 135 (136)
T ss_dssp HTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC-
T ss_pred HcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHhc
Confidence 47788889999999999999 66666788888888887764
No 36
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=94.87 E-value=0.037 Score=36.18 Aligned_cols=41 Identities=17% Similarity=0.238 Sum_probs=35.1
Q ss_pred eeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 38 FQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 38 Y~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
|-|.....+||+|++|+.+..+.-..+++++.+.|+.+|++
T Consensus 113 ~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 153 (156)
T 1kng_A 113 WGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEK 153 (156)
T ss_dssp TTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHHH
T ss_pred cCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 66777788999999999999887777899999988888864
No 37
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=94.87 E-value=0.022 Score=37.59 Aligned_cols=40 Identities=8% Similarity=0.064 Sum_probs=34.0
Q ss_pred EecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHH
Q psy17586 40 VDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 40 VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~ 79 (106)
|.....+||+|++|+.+..+....+++++.+.|+.+....
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC-
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 7778889999999999999988889999988888776443
No 38
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=94.86 E-value=0.029 Score=38.22 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=27.2
Q ss_pred cceeEEEEcCCCcEEEeec-----CCCCHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYG-----QNKKPEEVSNSIIVNM 76 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~-----~~~speeiAe~Ir~~l 76 (106)
|+..+||+||+|+++..+. ...+++++.+.|+++|
T Consensus 132 ~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 132 LARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKELI 171 (171)
T ss_dssp BCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC-
T ss_pred eeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhhC
Confidence 5788999999999999884 2345688888887654
No 39
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=94.85 E-value=0.034 Score=35.78 Aligned_cols=40 Identities=8% Similarity=0.157 Sum_probs=30.8
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|...-.+||+|++|+.+..+......+++.+.|...+
T Consensus 106 ~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 106 TYDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp HHCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred hcCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 4788899999999999999988765555566666665554
No 40
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=94.77 E-value=0.025 Score=36.44 Aligned_cols=38 Identities=11% Similarity=0.097 Sum_probs=32.7
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|.+...+||+|++|+.+..+. +++++.+.|+.+|+
T Consensus 109 ~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 109 QYAILTLPTNILLSPTGKILARDI---QGEALTGKLKELLK 146 (148)
T ss_dssp HTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC-
T ss_pred hcCCCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHHc
Confidence 588999999999999999998876 78888888888774
No 41
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=94.74 E-value=0.028 Score=35.71 Aligned_cols=39 Identities=10% Similarity=0.185 Sum_probs=31.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeec---CCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYG---QNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~---~~~speeiAe~Ir~~l 76 (106)
.|-|.....+||+|++|+.+ .+. ...+++++.+.|++++
T Consensus 94 ~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 94 RYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp HTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred hcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 37788889999999999999 666 5567888888887765
No 42
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=94.65 E-value=0.032 Score=36.43 Aligned_cols=41 Identities=7% Similarity=0.075 Sum_probs=34.3
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|.+...+||+|++|+++..+....+++++.+.|+.++.
T Consensus 103 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~ 143 (152)
T 2lja_A 103 AYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLG 143 (152)
T ss_dssp HTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHT
T ss_pred HcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhc
Confidence 47788999999999999999988776778888887777653
No 43
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=94.54 E-value=0.032 Score=36.62 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=35.0
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
..|-|.....+||+|++|+++..+....+++++.+.|+++.
T Consensus 103 ~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 103 ARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAG 143 (154)
T ss_dssp TTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTT
T ss_pred HHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhcc
Confidence 35788889999999999999999988888888888777665
No 44
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=94.17 E-value=0.047 Score=37.07 Aligned_cols=44 Identities=18% Similarity=0.189 Sum_probs=36.7
Q ss_pred eeEecceeEEEEcCCCcEEEeecCCCC-HHHHHHHHHHHHHHHHh
Q psy17586 38 FQVDHTIIMYLIDPEGLFVDYYGQNKK-PEEVSNSIIVNMMKYEN 81 (106)
Q Consensus 38 Y~VDHSa~iYLmDPdGrfv~~f~~~~s-peeiAe~Ir~~l~~~~~ 81 (106)
|.|.-.-.++|+|++|+.+..+.-..+ ++++.+.|...++++++
T Consensus 126 ~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~~~~ 170 (172)
T 3f9u_A 126 FGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLENYRK 170 (172)
T ss_dssp HSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHHhhc
Confidence 666777889999999999887765556 99999999999988765
No 45
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=94.07 E-value=0.067 Score=35.89 Aligned_cols=34 Identities=12% Similarity=0.050 Sum_probs=26.3
Q ss_pred ceeEEEEcCCCcEEEeecC-----CCCHHHHHHHHHHHH
Q psy17586 43 TIIMYLIDPEGLFVDYYGQ-----NKKPEEVSNSIIVNM 76 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~-----~~speeiAe~Ir~~l 76 (106)
+..+||+|++|+++..+.. ..+.+++.+.|++++
T Consensus 128 ~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 128 ARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp CCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHHH
T ss_pred eeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHhh
Confidence 4679999999999998842 224588888888775
No 46
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=93.97 E-value=0.055 Score=37.08 Aligned_cols=42 Identities=14% Similarity=0.087 Sum_probs=33.9
Q ss_pred ceeEecceeEEEEcCCCcEEEe---------ecCCCCHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDY---------YGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~---------f~~~~speeiAe~Ir~~l~~ 78 (106)
.|-|.+.-.+||+|++|+++.. +....+++++.+.|+.+++.
T Consensus 125 ~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 125 AYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp HHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred HhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 4778888899999999999987 33445788999999888753
No 47
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=93.79 E-value=0.06 Score=34.78 Aligned_cols=37 Identities=14% Similarity=0.292 Sum_probs=28.6
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.+...+||+|++|+++. ...+.+++.+.|..+.
T Consensus 104 ~~~v~~~P~~~lid~~G~i~~---~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 104 LYDIRATPTIYLLDGRKRVIL---KDTSMEQLIDYLATQA 140 (142)
T ss_dssp CSCCCSSSEEEEECTTCBEEE---CSCCHHHHHHHHHC--
T ss_pred HcCCCCCCeEEEECCCCCEEe---cCCCHHHHHHHHHHHc
Confidence 688999999999999999987 3466777777665543
No 48
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=93.71 E-value=0.075 Score=36.60 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=30.2
Q ss_pred cceeEEEEcCCCcEEEeecCCC----CHHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQNK----KPEEVSNSIIVNMMK 78 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~~----speeiAe~Ir~~l~~ 78 (106)
+...+||+|++|+++..+.... +++++.+.|+.+...
T Consensus 118 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~ 158 (187)
T 1we0_A 118 ADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQYV 158 (187)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHHH
T ss_pred eeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhh
Confidence 8889999999999999875433 678888888887753
No 49
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=93.60 E-value=0.14 Score=35.70 Aligned_cols=36 Identities=11% Similarity=0.247 Sum_probs=28.7
Q ss_pred cceeEEEEcCCCcEEEeecCCC----CHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQNK----KPEEVSNSIIVNMM 77 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~~----speeiAe~Ir~~l~ 77 (106)
++..+||+|++|+++..+.... +.+++.+.|+.+..
T Consensus 117 ~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~~ 156 (186)
T 1n8j_A 117 ADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQY 156 (186)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred eeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 6789999999999999875433 57888888887664
No 50
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=93.50 E-value=0.042 Score=39.69 Aligned_cols=39 Identities=13% Similarity=0.244 Sum_probs=26.5
Q ss_pred cceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
....+||||++|+++..+....+.+..++.+.+.|++.+
T Consensus 159 ~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~l~ 197 (222)
T 3ztl_A 159 AFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDAFQ 197 (222)
T ss_dssp BCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 567899999999999998665544444444445554443
No 51
>3id6_A NOP5, PRE mRNA splicing protein; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus}
Probab=93.45 E-value=0.16 Score=39.70 Aligned_cols=38 Identities=21% Similarity=0.430 Sum_probs=34.4
Q ss_pred eeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 38 FQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 38 Y~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
|+++|.+.+|++|.+|+++++.+...+++++++.+..+
T Consensus 5 yl~~~~~G~~a~de~g~lv~f~pF~~s~~~ale~~~~i 42 (268)
T 3id6_A 5 YLIEHVIGAVAYDENGNIVDYITNPRDLGKITEELLNN 42 (268)
T ss_dssp EEEEETTEEEEECTTSCEEEEEECCSCHHHHHHHHHHH
T ss_pred EEEecceeeEEECCCCCeeeecCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999988898888877654
No 52
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=93.44 E-value=0.075 Score=36.02 Aligned_cols=33 Identities=6% Similarity=-0.052 Sum_probs=23.7
Q ss_pred cceeEEEEcCCCcEEEeec-----CCCCHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYG-----QNKKPEEVSNSIIV 74 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~-----~~~speeiAe~Ir~ 74 (106)
|+..+||+|++|+++..+. ...+.+++.+.|++
T Consensus 128 ~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 128 LARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp ECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred eeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 5889999999999998742 22345677766653
No 53
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=93.31 E-value=0.088 Score=33.56 Aligned_cols=36 Identities=8% Similarity=0.065 Sum_probs=31.1
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSI 72 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~I 72 (106)
.|-|.+.-.+||+|++|+.+..+.-..+++++.+.|
T Consensus 109 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 109 EYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp HTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred hcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 478889999999999999999888888888877654
No 54
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=93.28 E-value=0.078 Score=36.93 Aligned_cols=41 Identities=12% Similarity=0.037 Sum_probs=32.7
Q ss_pred ceeEe-----cceeEEEEcCCCcEEEeecCCC----CHHHHHHHHHHHHH
Q psy17586 37 WFQVD-----HTIIMYLIDPEGLFVDYYGQNK----KPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VD-----HSa~iYLmDPdGrfv~~f~~~~----speeiAe~Ir~~l~ 77 (106)
.|-|. +...+||+|++|+++..+.... +++++.+.|+.++.
T Consensus 121 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 121 AAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp HHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred HhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 36677 8899999999999999874433 67888888887764
No 55
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=92.83 E-value=0.12 Score=34.86 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=24.3
Q ss_pred cceeEEEEcCCCcEEEeecC---CC--CHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQ---NK--KPEEVSNSIIV 74 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~---~~--speeiAe~Ir~ 74 (106)
|+..+||+|++|+++..+.. .. +.+++.+.|++
T Consensus 125 ~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 125 LARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp BCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred eEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 45789999999999998842 22 33777777664
No 56
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=92.65 E-value=0.091 Score=34.59 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=30.7
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|...-.+||+|++|+.+..+ .+++++.+.|+.+++
T Consensus 104 ~~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 104 SYCIVGFPHIILVDPEGKIVAKE---LRGDDLYNTVEKFVN 141 (152)
T ss_dssp HTTCCSSCEEEEECTTSEEEEEC---CCTTHHHHHHHHHHT
T ss_pred HhCCCcCCeEEEECCCCeEEEee---CCHHHHHHHHHHHHh
Confidence 47788889999999999999886 356777777777764
No 57
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=92.59 E-value=0.11 Score=35.28 Aligned_cols=37 Identities=19% Similarity=0.165 Sum_probs=29.3
Q ss_pred cceeEEEEcCCCcEEEeecCCCC--HHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQNKK--PEEVSNSIIVNMMK 78 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~~s--peeiAe~Ir~~l~~ 78 (106)
+.-.+||+|++|+++..+....+ ++++.+.|+.++++
T Consensus 143 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 143 GMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATGK 181 (186)
T ss_dssp SSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC-
T ss_pred CCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhcc
Confidence 67789999999999988755443 78888888888753
No 58
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=92.52 E-value=0.1 Score=36.35 Aligned_cols=41 Identities=12% Similarity=-0.012 Sum_probs=31.0
Q ss_pred ceeEe-----cceeEEEEcCCCcEEEeecCCC----CHHHHHHHHHHHHH
Q psy17586 37 WFQVD-----HTIIMYLIDPEGLFVDYYGQNK----KPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VD-----HSa~iYLmDPdGrfv~~f~~~~----speeiAe~Ir~~l~ 77 (106)
.|-|. |...+||+|++|+++..+.... +++++.+.|+.+..
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 161 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALLH 161 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 36666 8899999999999999875433 56777777776653
No 59
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=92.16 E-value=0.088 Score=34.32 Aligned_cols=43 Identities=14% Similarity=0.125 Sum_probs=31.6
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCC--CHHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNK--KPEEVSNSIIVNMMKY 79 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~--speeiAe~Ir~~l~~~ 79 (106)
.|-|.....+||+|++|+++..+.... +.+++.+.|+.+....
T Consensus 101 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 101 LYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp HHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC----
T ss_pred HhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHHh
Confidence 377888899999999999998876554 5668888777766544
No 60
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=91.88 E-value=0.26 Score=35.39 Aligned_cols=40 Identities=20% Similarity=0.200 Sum_probs=31.0
Q ss_pred eeEe-----cceeEEEEcCCCcEEEeecCC----CCHHHHHHHHHHHHH
Q psy17586 38 FQVD-----HTIIMYLIDPEGLFVDYYGQN----KKPEEVSNSIIVNMM 77 (106)
Q Consensus 38 Y~VD-----HSa~iYLmDPdGrfv~~f~~~----~speeiAe~Ir~~l~ 77 (106)
|-|. +...+||||++|+++..+... .+.+++.+.|+.+..
T Consensus 132 ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l~~ 180 (213)
T 2i81_A 132 YNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQH 180 (213)
T ss_dssp TTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHH
T ss_pred hCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHh
Confidence 5565 788899999999999987433 347888888887763
No 61
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=91.54 E-value=0.2 Score=39.55 Aligned_cols=44 Identities=11% Similarity=-0.028 Sum_probs=38.0
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
.|-|...-.+||+|++|+++..+....+.+++.+.|++++++..
T Consensus 159 ~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e~~ 202 (352)
T 2hyx_A 159 NYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDAK 202 (352)
T ss_dssp HTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHHHS
T ss_pred HcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhhcc
Confidence 37788889999999999999998777789999999999986553
No 62
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=91.51 E-value=0.13 Score=34.25 Aligned_cols=39 Identities=15% Similarity=0.122 Sum_probs=30.3
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|...-.+||+|++|+++. .+...+.+++.+.|+.++
T Consensus 125 ~~~v~~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 125 KFNVRSIDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp HTTCCSSSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC-
T ss_pred HhCCCCceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHh
Confidence 477889999999999999998 443336888888777665
No 63
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=91.25 E-value=0.33 Score=30.86 Aligned_cols=40 Identities=13% Similarity=0.158 Sum_probs=33.1
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|...-.++++|++|+.+..+.-..+++++.+.|+.++
T Consensus 81 ~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 81 KYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGV 120 (130)
T ss_dssp HTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 4778888999999999999987776677888888777765
No 64
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=91.19 E-value=0.12 Score=35.33 Aligned_cols=40 Identities=15% Similarity=0.216 Sum_probs=31.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecC---------CCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQ---------NKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~---------~~speeiAe~Ir~~l~ 77 (106)
.|-|...-.+||+|++|+++.. .. ..+++++.+.|+.+++
T Consensus 111 ~~~v~~~P~~~lid~~G~i~~~-g~~~~~~~~~g~~~~~~l~~~i~~ll~ 159 (188)
T 2cvb_A 111 AYRALRTPEVFLFDERRLLRYH-GRVNDNPKDPSKVQSHDLEAAIEALLR 159 (188)
T ss_dssp HTTCCEESEEEEECTTCBEEEE-ECSSSCTTCGGGCCCCHHHHHHHHHHT
T ss_pred HcCCCCCCeEEEECCCCcEEEE-EecCCccccccccCHHHHHHHHHHHHc
Confidence 4777788889999999998877 22 2367888888888774
No 65
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=91.10 E-value=0.14 Score=37.74 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=23.8
Q ss_pred cceeEEEEcCCCcEEEeecCCC----CHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQNK----KPEEVSNSIIVN 75 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~~----speeiAe~Ir~~ 75 (106)
+...+|||||+|+++..+.... +.+++.+.|+.+
T Consensus 167 ~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 167 TLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred ccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 5678999999999998876543 345555555443
No 66
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=90.98 E-value=0.22 Score=35.51 Aligned_cols=42 Identities=12% Similarity=0.032 Sum_probs=32.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecC---------CCCHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQ---------NKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~---------~~speeiAe~Ir~~l~~ 78 (106)
.|-|.++..+||+|++|+++..... ..+.+++.+.|+.++..
T Consensus 138 ~~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 138 AYGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp HHTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred HcCCCCCCeEEEECCCCcEEEeccccccccccccccCHHHHHHHHHHHHcC
Confidence 4889999999999999998854321 23468888888888753
No 67
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=90.87 E-value=0.55 Score=34.20 Aligned_cols=36 Identities=8% Similarity=0.146 Sum_probs=28.7
Q ss_pred cceeEEEEcCCCcEEEeecCC----CCHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQN----KKPEEVSNSIIVNMM 77 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~----~speeiAe~Ir~~l~ 77 (106)
+...+|||||+|+++..+... .+.+++...|+.+..
T Consensus 130 ~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l~~ 169 (224)
T 1prx_A 130 TARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISLQL 169 (224)
T ss_dssp TCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHHHH
T ss_pred cceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHh
Confidence 467899999999999998543 367888888887764
No 68
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=90.84 E-value=0.56 Score=33.53 Aligned_cols=36 Identities=11% Similarity=0.152 Sum_probs=28.5
Q ss_pred cceeEEEEcCCCcEEEeecC----CCCHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQ----NKKPEEVSNSIIVNMM 77 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~----~~speeiAe~Ir~~l~ 77 (106)
....+||||++|+++..+.. +.+.+++.+.|+.+..
T Consensus 138 ~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l~~ 177 (211)
T 2pn8_A 138 TLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQY 177 (211)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhhh
Confidence 57899999999999998732 2467888888887764
No 69
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=90.70 E-value=0.53 Score=32.29 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=24.4
Q ss_pred eeEEEEcCCCcEEEeecC----C-CCHHHHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQ----N-KKPEEVSNSIIVNMMK 78 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~----~-~speeiAe~Ir~~l~~ 78 (106)
-.+||||++|+++..+-. + .+.+++.+.|+++..+
T Consensus 122 p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l~~e 161 (164)
T 4gqc_A 122 RAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKIAGE 161 (164)
T ss_dssp CEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHHhcc
Confidence 357999999998865421 1 2567888888776543
No 70
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=90.62 E-value=0.33 Score=33.96 Aligned_cols=36 Identities=11% Similarity=0.124 Sum_probs=28.2
Q ss_pred cceeEEEEcCCCcEEEeecC----CCCHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQ----NKKPEEVSNSIIVNMM 77 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~----~~speeiAe~Ir~~l~ 77 (106)
+...+||+|++|+++..+.. +.+.+++.+.|+.+..
T Consensus 126 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~~ 165 (202)
T 1uul_A 126 AYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQF 165 (202)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred eeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhhh
Confidence 78889999999999988643 2356888888887763
No 71
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=90.48 E-value=0.43 Score=34.72 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=29.2
Q ss_pred cceeEEEEcCCCcEEEeecC----CCCHHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQ----NKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~----~~speeiAe~Ir~~l~~ 78 (106)
....+||||++|+++..+.. ..+.+++.+.|+.+...
T Consensus 145 ~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L~~~ 185 (221)
T 2c0d_A 145 ALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSIIHV 185 (221)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHHH
T ss_pred ccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhh
Confidence 57899999999999998733 34678888888887643
No 72
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=90.46 E-value=0.28 Score=31.79 Aligned_cols=40 Identities=18% Similarity=0.227 Sum_probs=29.6
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCC--HHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKK--PEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~s--peeiAe~Ir~~l 76 (106)
.|-|...-.+||+|++|+.+..+....+ .+++.+.|++++
T Consensus 100 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 100 LYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp HTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred HcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 3778888999999999999987755433 356666666554
No 73
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=90.29 E-value=0.37 Score=33.23 Aligned_cols=36 Identities=19% Similarity=0.134 Sum_probs=26.9
Q ss_pred cceeEEEEcCCCcEEEeecCCC----CHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQNK----KPEEVSNSIIVNMM 77 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~~----speeiAe~Ir~~l~ 77 (106)
....+||+|++|+++..+.... +.+++.+.|+.+..
T Consensus 120 ~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 159 (192)
T 2h01_A 120 ALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDALQH 159 (192)
T ss_dssp ECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHHHH
T ss_pred eeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Confidence 6778999999999998875432 46777777776653
No 74
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=90.27 E-value=0.56 Score=34.06 Aligned_cols=36 Identities=11% Similarity=0.141 Sum_probs=28.3
Q ss_pred cceeEEEEcCCCcEEEeecC----CCCHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQ----NKKPEEVSNSIIVNMM 77 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~----~~speeiAe~Ir~~l~ 77 (106)
+...+|||||+|+++..+.. +.+.+++...|+.+..
T Consensus 127 ~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~lq~ 166 (220)
T 1xcc_A 127 TCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSLQL 166 (220)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHh
Confidence 46789999999999998853 3467888888877653
No 75
>3pla_A NOP5, PRE mRNA splicing protein; RNA-binding, SAM, box C/D RNA; HET: SAH; 3.15A {Sulfolobus solfataricus} PDB: 3id5_A*
Probab=90.26 E-value=0.48 Score=38.91 Aligned_cols=38 Identities=21% Similarity=0.430 Sum_probs=34.6
Q ss_pred eeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 38 FQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 38 Y~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
|+++|...+|++|.+|+++.+.+...++++.++.+..+
T Consensus 5 yl~~~~~G~~a~de~~~l~~~~~f~~s~~~ale~~~~i 42 (388)
T 3pla_A 5 YLIEHVIGAVAYDENGNIVDYITNPRDLGKITEELLNN 42 (388)
T ss_dssp EEEEETTEEEEECSSSCEEEEEECCSCHHHHHHHHHHH
T ss_pred EEEecceeeEEECCCCCeEeecCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999988899888877654
No 76
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=90.12 E-value=0.4 Score=32.28 Aligned_cols=40 Identities=13% Similarity=0.090 Sum_probs=32.1
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCC--CHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNK--KPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~--speeiAe~Ir~~l~ 77 (106)
.|-|.-.-.++|+|++|+.+..+ -.. +++++.+.|..+++
T Consensus 111 ~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 111 QYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp HTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred HcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 47788889999999999999988 434 67888888777663
No 77
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=89.35 E-value=0.82 Score=33.77 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=28.1
Q ss_pred cceeEEEEcCCCcEEEeecC----CCCHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQ----NKKPEEVSNSIIVNMM 77 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~----~~speeiAe~Ir~~l~ 77 (106)
+...+|||||+|+++..+.. +.+.++|...|+.+..
T Consensus 126 ~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~Lq~ 165 (233)
T 2v2g_A 126 TCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSLQL 165 (233)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHHh
Confidence 47789999999999998843 2357888888877653
No 78
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=89.24 E-value=0.22 Score=35.80 Aligned_cols=35 Identities=17% Similarity=0.249 Sum_probs=26.7
Q ss_pred cceeEEEEcCCCcEEEeecCC----CCHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQN----KKPEEVSNSIIVNM 76 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~----~speeiAe~Ir~~l 76 (106)
....+||+|++|+++..+... .+.+++.+.|+.+.
T Consensus 146 ~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 146 ALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred ccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 678999999999999876433 35577777777665
No 79
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=89.20 E-value=0.28 Score=32.34 Aligned_cols=32 Identities=6% Similarity=-0.043 Sum_probs=21.5
Q ss_pred eEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 45 IMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 45 ~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.+||+|++|+++..+....+.+...+.+.+.|
T Consensus 124 ~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l 155 (160)
T 1xvw_A 124 GTFVVDRSGIIRFAEMKQPGEVRDQRLWTDAL 155 (160)
T ss_dssp EEEEECTTSBEEEEEECCTTCCCCHHHHHHHH
T ss_pred eEEEECCCCeEEEEEecCCCCCCCHHHHHHHH
Confidence 69999999999998865554333334444444
No 80
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=88.35 E-value=0.54 Score=29.84 Aligned_cols=40 Identities=8% Similarity=-0.027 Sum_probs=32.3
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|...-.++++|++|+.+..+.-..+.+++.+.|..++
T Consensus 77 ~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 77 KYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp HTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred HcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 4778888999999999999988776677888777666554
No 81
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=88.22 E-value=0.29 Score=36.66 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=22.9
Q ss_pred cceeEEEEcCCCcEEEeecCCC----CHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQNK----KPEEVSNSIIV 74 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~~----speeiAe~Ir~ 74 (106)
....+|||||+|+++..+.... +.+++.+.|+.
T Consensus 181 ~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 181 TLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred ccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 4567999999999998876543 34555555443
No 82
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=87.29 E-value=0.44 Score=32.14 Aligned_cols=19 Identities=5% Similarity=0.022 Sum_probs=17.3
Q ss_pred cceeEEEEcCCCcEEEeec
Q psy17586 42 HTIIMYLIDPEGLFVDYYG 60 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~ 60 (106)
|+..+||+|++|+++..+.
T Consensus 129 ~~p~~~liD~~G~i~~~~~ 147 (165)
T 1q98_A 129 TSRAVIVLDEQNNVLHSQL 147 (165)
T ss_dssp BCCEEEEECTTSBEEEEEE
T ss_pred cceeEEEEcCCCEEEEEEe
Confidence 7889999999999999884
No 83
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=87.20 E-value=0.64 Score=32.96 Aligned_cols=18 Identities=6% Similarity=0.001 Sum_probs=16.4
Q ss_pred cceeEEEEcCCCcEEEee
Q psy17586 42 HTIIMYLIDPEGLFVDYY 59 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f 59 (106)
|+..+||||++|+++...
T Consensus 164 ~~p~~~lID~~G~I~~~~ 181 (200)
T 3zrd_A 164 TARAVVVLDGQDNVIYSE 181 (200)
T ss_dssp BCCEEEEECTTSBEEEEE
T ss_pred cccEEEEECCCCeEEEEE
Confidence 788999999999999875
No 84
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=87.02 E-value=0.54 Score=31.16 Aligned_cols=34 Identities=12% Similarity=0.163 Sum_probs=27.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSN 70 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe 70 (106)
.|.|.....+||+|++|+++..+....+.++...
T Consensus 108 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~~~ 141 (152)
T 2lrt_A 108 LYNVTNLPSVFLVNRNNELSARGENIKDLDEAIK 141 (152)
T ss_dssp HHTCCSCSEEEEEETTTEEEEETTTCSCHHHHHH
T ss_pred HcCcccCceEEEECCCCeEEEecCCHHHHHHHHH
Confidence 4777788899999999999998877666665444
No 85
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=86.74 E-value=1 Score=30.38 Aligned_cols=30 Identities=17% Similarity=0.262 Sum_probs=18.9
Q ss_pred eeEEEEcCCCcEEEeec-C----CCCHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYG-Q----NKKPEEVSNSII 73 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~-~----~~speeiAe~Ir 73 (106)
-.+||+|++|+++..+- . ..+.+++.+.|+
T Consensus 120 p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~ 154 (157)
T 4g2e_A 120 RAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVK 154 (157)
T ss_dssp EEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHH
T ss_pred eeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHH
Confidence 35899999999876542 1 123456555544
No 86
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=86.65 E-value=0.36 Score=31.31 Aligned_cols=33 Identities=18% Similarity=0.435 Sum_probs=25.3
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSI 72 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~I 72 (106)
.|-|.+.-.+||+|++|+++... .+++++.+.|
T Consensus 108 ~~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l 140 (143)
T 4fo5_A 108 KYDLRKGFKNFLINDEGVIIAAN---VTPEKLTEIL 140 (143)
T ss_dssp HTTGGGCCCEEEECTTSBEEEES---CCHHHHHHHH
T ss_pred HcCCCCCCcEEEECCCCEEEEcc---CCHHHHHHHH
Confidence 47788889999999999998864 3466655544
No 87
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=86.23 E-value=0.79 Score=30.39 Aligned_cols=34 Identities=6% Similarity=0.085 Sum_probs=24.7
Q ss_pred eEEEEcCCCcEEEeecCCCC---HHHHHHHHHHHHHHH
Q psy17586 45 IMYLIDPEGLFVDYYGQNKK---PEEVSNSIIVNMMKY 79 (106)
Q Consensus 45 ~iYLmDPdGrfv~~f~~~~s---peeiAe~Ir~~l~~~ 79 (106)
.+||+ ++|+++..+....+ .+++++.|++++++.
T Consensus 120 ~~~li-~~G~i~~~~~g~~~~~~~~~~~~~l~~~l~~l 156 (159)
T 2a4v_A 120 SHFIF-VDGKLKFKRVKISPEVSVNDAKKEVLEVAEKF 156 (159)
T ss_dssp EEEEE-ETTEEEEEEESCCHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEE-cCCEEEEEEccCCccccHHHHHHHHHHHHHHh
Confidence 68999 99999998754332 356777777777654
No 88
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=86.20 E-value=0.91 Score=31.42 Aligned_cols=35 Identities=11% Similarity=0.158 Sum_probs=26.2
Q ss_pred cceeEEEEcCCCcEEEeecCC----CCHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQN----KKPEEVSNSIIVNM 76 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~----~speeiAe~Ir~~l 76 (106)
+...+||+|++|+++..+... .+.+++.+.|+.+.
T Consensus 124 ~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 124 AYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred eeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 567899999999999887443 34677777776654
No 89
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=86.18 E-value=0.91 Score=30.98 Aligned_cols=50 Identities=14% Similarity=0.076 Sum_probs=35.7
Q ss_pred ceeEe--cceeEEEEcCCCcEEEeecC----------CCCHHHHHHHHHHHHHHHHhhhcCC
Q psy17586 37 WFQVD--HTIIMYLIDPEGLFVDYYGQ----------NKKPEEVSNSIIVNMMKYENLKKKS 86 (106)
Q Consensus 37 dY~VD--HSa~iYLmDPdGrfv~~f~~----------~~speeiAe~Ir~~l~~~~~~~~~~ 86 (106)
.|.+. -...++++|++|+.+..+.- ..+++++.+.|++++.+.+...+..
T Consensus 96 ~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~ 157 (164)
T 1sen_A 96 DFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERLTGDAFRK 157 (164)
T ss_dssp GGCTTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHHGGGCC--
T ss_pred HhcccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHhccHhhhcc
Confidence 45553 36688999999998875543 3678999999999987776554443
No 90
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=85.60 E-value=0.65 Score=31.67 Aligned_cols=19 Identities=11% Similarity=-0.036 Sum_probs=16.6
Q ss_pred cceeEEEEcCCCcEEEeec
Q psy17586 42 HTIIMYLIDPEGLFVDYYG 60 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~ 60 (106)
|+..+||+|++|+++..+.
T Consensus 128 ~~p~~~lid~~G~I~~~~~ 146 (175)
T 1xvq_A 128 LARAIVVIGADGNVAYTEL 146 (175)
T ss_dssp BCSEEEEECTTSBEEEEEE
T ss_pred ccceEEEECCCCeEEEEEE
Confidence 4578999999999999884
No 91
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=83.64 E-value=1.3 Score=34.20 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=21.8
Q ss_pred eEEEEcCCCcEEEeecCCC---CHHHHHHHHHHHH
Q psy17586 45 IMYLIDPEGLFVDYYGQNK---KPEEVSNSIIVNM 76 (106)
Q Consensus 45 ~iYLmDPdGrfv~~f~~~~---speeiAe~Ir~~l 76 (106)
.+|||||+|+++..+..-. .++++.+.|.++.
T Consensus 104 ~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~~ 138 (322)
T 4eo3_A 104 STFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLI 138 (322)
T ss_dssp EEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHHH
T ss_pred EEEEECCCCEEEEEEeCCCccccHHHHHHHHhhhc
Confidence 5799999999998875433 2355555555554
No 92
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=83.55 E-value=1.3 Score=28.49 Aligned_cols=32 Identities=13% Similarity=0.185 Sum_probs=24.6
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCCCCHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSN 70 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe 70 (106)
..|-|.+.-.+||+|++|+.+.... +.+++.+
T Consensus 107 ~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~ 138 (142)
T 3eur_A 107 NLYDLRAIPTLYLLDKNKTVLLKDA---TLQKVEQ 138 (142)
T ss_dssp TCSCCTTCSEEEEECTTCBEEEEEE---CHHHHHH
T ss_pred hhcCCCcCCeEEEECCCCcEEecCC---CHHHHHH
Confidence 4688999999999999999987653 3444444
No 93
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=83.44 E-value=1.2 Score=31.06 Aligned_cols=43 Identities=9% Similarity=0.152 Sum_probs=34.9
Q ss_pred ceeEecceeEEEEcCC-CcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPE-GLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 37 dY~VDHSa~iYLmDPd-Grfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
.|-|.-.-.+.++||+ |+.+..+.. .+++++.+.|+.++.++.
T Consensus 96 ~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l~~~~ 139 (153)
T 2dlx_A 96 FYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFLGEHG 139 (153)
T ss_dssp HHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHHHHTC
T ss_pred HcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHHHhcC
Confidence 3677778899999999 866666654 899999999999987764
No 94
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=83.36 E-value=0.97 Score=29.74 Aligned_cols=37 Identities=8% Similarity=0.182 Sum_probs=28.1
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCC--HHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKK--PEEVSNSII 73 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~s--peeiAe~Ir 73 (106)
.|-|.....+||+|++|+++..+.-..+ .+++.+.++
T Consensus 110 ~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~ 148 (158)
T 3hdc_A 110 RYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLK 148 (158)
T ss_dssp HTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHH
Confidence 4788899999999999999988866554 345555444
No 95
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=82.84 E-value=1.6 Score=32.77 Aligned_cols=46 Identities=9% Similarity=0.174 Sum_probs=32.3
Q ss_pred cceeEEEEcCCCcEEEeecCCC----CHHHHHHHHHHHHH--HHHhhhcCCc
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQNK----KPEEVSNSIIVNMM--KYENLKKKSW 87 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~~----speeiAe~Ir~~l~--~~~~~~~~~~ 87 (106)
+.-.+|||||+|+++..+.... +.++|...|..+.. +....---.|
T Consensus 123 ~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~~~~~~~~~Pa~W 174 (249)
T 3a2v_A 123 TVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADW 174 (249)
T ss_dssp CCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHHHHHHTCBBCTTT
T ss_pred ccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHHhccccCccCCCCC
Confidence 5678999999999999875443 67888887777653 2234444456
No 96
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=82.67 E-value=0.71 Score=29.75 Aligned_cols=40 Identities=10% Similarity=0.044 Sum_probs=32.1
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|...-.++++|++|+.+. +.-..+.+++.+.|..+|.
T Consensus 100 ~~~v~~~Pt~~~~~~~g~~~~-~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 100 DFGIQSIPTIWFVPMKGEPQV-NMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HTTCCSSSEEEEECSSSCCEE-EESCCCHHHHHHHHHHTTC
T ss_pred HcCCCCcCEEEEEeCCCCEEE-EeCCCCHHHHHHHHHHHHc
Confidence 588899999999999999884 4555678888888877663
No 97
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=81.54 E-value=1.8 Score=28.00 Aligned_cols=39 Identities=13% Similarity=-0.015 Sum_probs=30.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|...-.++++|++|+.+. +.-..+++++.+.|++++
T Consensus 87 ~~~v~~~Pt~~~~~~~G~~~~-~~G~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 87 AFGIRSIPSILFIPMEGKPEM-AQGAMPKASFKKAIDEFL 125 (136)
T ss_dssp HTTCCSSCEEEEECSSSCCEE-EESCCCHHHHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCCcEEE-EeCCCCHHHHHHHHHHHh
Confidence 488899999999999999884 444567787777766654
No 98
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=79.94 E-value=1.6 Score=26.21 Aligned_cols=39 Identities=10% Similarity=0.129 Sum_probs=33.0
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.....++++ ++|+.+..+.-..+++++.+.|+.+|
T Consensus 70 ~~~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 70 KYSVLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred hcCcccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 4778888888888 99999998887788999988887765
No 99
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=79.66 E-value=1.8 Score=26.36 Aligned_cols=40 Identities=8% Similarity=0.071 Sum_probs=32.6
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|.|.....++++ ++|+.+..+.-..+.+++.+.|.+++.
T Consensus 74 ~~~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 74 KYKVEGVPALRLV-KGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HcCCCceeEEEEE-cCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 4788888899999 999999877766788888888877663
No 100
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=79.38 E-value=2.6 Score=26.82 Aligned_cols=39 Identities=5% Similarity=-0.019 Sum_probs=29.2
Q ss_pred ceeE---ecceeEEEEcCCCcEEEeecC-------CCCHHHHHHHHHHH
Q psy17586 37 WFQV---DHTIIMYLIDPEGLFVDYYGQ-------NKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~V---DHSa~iYLmDPdGrfv~~f~~-------~~speeiAe~Ir~~ 75 (106)
.|-| .-.-.++|+|++|+.+..+.- ..+.+++.+-|+.+
T Consensus 83 ~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 83 AYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp HTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred HhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 4778 778899999999999987765 35666666655543
No 101
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=77.82 E-value=3.1 Score=24.47 Aligned_cols=39 Identities=18% Similarity=0.061 Sum_probs=31.7
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.....++++ ++|+.+..+.-..+.+++.+.|+.++
T Consensus 64 ~~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 64 RYGVMSLPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp HTTCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred hCCccccCEEEEE-ECCeEhhhccCCCCHHHHHHHHHHHh
Confidence 4778888888888 89999888777778888888887766
No 102
>2l6o_A Uncharacterized protein YP_926445.1; structural genomics, PSI-biology, protein structure initiati center for structural genomics, JCSG; NMR {Shewanella amazonensis}
Probab=77.73 E-value=6.8 Score=26.95 Aligned_cols=54 Identities=9% Similarity=0.059 Sum_probs=38.9
Q ss_pred CCceeEecceeEEEEcCCC-cEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcchhh
Q psy17586 35 IFWFQVDHTIIMYLIDPEG-LFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWFEDT 91 (106)
Q Consensus 35 ~~dY~VDHSa~iYLmDPdG-rfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~~~~ 91 (106)
..+|+||-....|.+.++. .+.. .+ .+.+++.+-||.+......-=..|...++
T Consensus 47 ~~d~LIDs~G~~y~L~~~~~~l~~--~~-lsl~ev~~LIq~H~~~~g~cC~~KI~f~s 101 (114)
T 2l6o_A 47 YGDKLVDSNFHCFVLEEDAHWHPA--AP-LPPEGLNDLIRAHCATLGHCCTSKMHLHS 101 (114)
T ss_dssp TTCCEEETTCEEEEECTTSSEEEE--EE-CCHHHHHHHHHHHHHHHTCCCSSSSSCSS
T ss_pred CCCEEEeCCCCEEEecCCCccccc--Cc-ccHHHHHHHHHHHHHhhCceehhhhCCCC
Confidence 5689999999999999999 4444 55 89999999888877544333333333333
No 103
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=77.72 E-value=1.5 Score=32.76 Aligned_cols=32 Identities=22% Similarity=0.322 Sum_probs=22.9
Q ss_pred eeEEEEcCCCcEEEeecC----CCCHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQ----NKKPEEVSNSIIVN 75 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~----~~speeiAe~Ir~~ 75 (106)
-.+|||||+|+++..+-+ +.+.+++...|+.+
T Consensus 148 R~tFiIDp~g~Ir~~~~~~~~~gr~~~EvLr~l~aL 183 (219)
T 3tue_A 148 RGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAF 183 (219)
T ss_dssp EEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred EEEEEECCCCeEEEEEEecCCCCCCHHHHHHHHHHh
Confidence 467999999998876633 33567777766654
No 104
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=77.42 E-value=1.3 Score=28.74 Aligned_cols=38 Identities=13% Similarity=-0.010 Sum_probs=28.5
Q ss_pred ceeEecceeEEEEcCCCcEE--EeecCCCCHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFV--DYYGQNKKPEEVSNSIIV 74 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv--~~f~~~~speeiAe~Ir~ 74 (106)
.|-|.-.-.++|+|++|+.+ ..+.-..+++++.+.|..
T Consensus 86 ~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~ 125 (134)
T 2fwh_A 86 HLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp HTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHh
Confidence 47788888999999999997 445555677777765543
No 105
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=76.41 E-value=3.4 Score=24.90 Aligned_cols=39 Identities=8% Similarity=0.049 Sum_probs=31.6
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.....++++ ++|+.+..+.-..+++++.+.|++++
T Consensus 69 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 69 KYGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HcCCcccCEEEEE-eCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 4778888888888 89999888776778888888777665
No 106
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=76.17 E-value=5.9 Score=29.46 Aligned_cols=36 Identities=6% Similarity=-0.094 Sum_probs=26.5
Q ss_pred cceeEEEEcCCCcEEEeecC-----CCCHHHHHHHHHHHHH
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQ-----NKKPEEVSNSIIVNMM 77 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~-----~~speeiAe~Ir~~l~ 77 (106)
+.-.+||||++|+++..... ..+.+++.+.|+.+.+
T Consensus 136 ~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~~ 176 (224)
T 3keb_A 136 TSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGEQ 176 (224)
T ss_dssp BCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHHH
T ss_pred ccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhhh
Confidence 36789999999999876432 2346888888877653
No 107
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=75.56 E-value=1.7 Score=32.37 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=22.4
Q ss_pred eeEEEEcCCCcEEEeecC----CCCHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQ----NKKPEEVSNSIIVN 75 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~----~~speeiAe~Ir~~ 75 (106)
-.+|||||+|+++...-+ +.+.+|+...|..+
T Consensus 144 R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~Al 179 (216)
T 3sbc_A 144 RGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEAF 179 (216)
T ss_dssp EEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred eEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHHh
Confidence 579999999988765533 33567777666554
No 108
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=76.93 E-value=0.6 Score=29.68 Aligned_cols=44 Identities=16% Similarity=0.149 Sum_probs=34.1
Q ss_pred CceeEecceeEEEEcCC-CcE--EEeecCCCCHHHHHHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPE-GLF--VDYYGQNKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPd-Grf--v~~f~~~~speeiAe~Ir~~l~~~ 79 (106)
..|-|.-.-.++|+||+ |+. +..+.-..+++++.+.|++++.+.
T Consensus 72 ~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 72 RRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 35888899999999985 887 666655567788888888877654
No 109
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=76.26 E-value=0.65 Score=30.48 Aligned_cols=35 Identities=23% Similarity=0.095 Sum_probs=24.0
Q ss_pred EecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 40 VDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 40 VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
+.....+||+|++|+++..+. +.+++++.+.|..+
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~-g~~~~~l~~~l~~l 146 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTR-LYNEEEFASLVQQI 146 (159)
Confidence 445678999999999988774 45566655544443
No 110
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.32 E-value=5.9 Score=24.72 Aligned_cols=42 Identities=5% Similarity=0.056 Sum_probs=34.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~ 79 (106)
.|-|...-.++++++ |+.+..+.-..+.+++.+.|.+++...
T Consensus 78 ~~~v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 78 RYGIRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp HHTCCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred hCCCCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHHHhhcc
Confidence 478888889999988 887777777778899999888888654
No 111
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=73.25 E-value=5.1 Score=25.37 Aligned_cols=34 Identities=9% Similarity=0.147 Sum_probs=28.3
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
-.+|++-|+|..+. ++.+.++.++|..|..-+.+
T Consensus 6 ~~i~v~tP~G~~~~-lp~GaT~~D~A~~Ih~~lg~ 39 (78)
T 3hvz_A 6 EEVFVFTPKGDVIS-LPIGSTVIDFAYAIHSAVGN 39 (78)
T ss_dssp CEEEEECTTSCEEE-EETTCBHHHHHHHHCHHHHH
T ss_pred ceEEEECCCCCEEE-ecCCCCHHHHHHHhhhhhhc
Confidence 46899999999765 69999999999988776644
No 112
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=74.67 E-value=0.77 Score=29.20 Aligned_cols=27 Identities=7% Similarity=0.298 Sum_probs=22.1
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCC
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~ 62 (106)
..|-|.....+||+|++|+.+......
T Consensus 102 ~~~~v~~~P~~~lid~~G~i~~~~~~~ 128 (143)
T 2lus_A 102 AKYGITGIPALVIVKKDGTLISMNGRG 128 (143)
Confidence 358888899999999999998875443
No 113
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=71.58 E-value=5.1 Score=25.09 Aligned_cols=42 Identities=7% Similarity=0.109 Sum_probs=32.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
.|-|...-.+++++++|+.+..+.-..+++++.+.|.+.+.+
T Consensus 84 ~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~~ 125 (130)
T 2dml_A 84 QYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRS 125 (130)
T ss_dssp HHTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHhc
Confidence 478888999999999998455555566788888888777643
No 114
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=71.45 E-value=4.3 Score=24.46 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=32.6
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|.....++++ .+|+.+..+.-..+++++.+.|+.++.
T Consensus 71 ~~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 71 RFSLKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp HTTCCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred hcCCCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHHhc
Confidence 4778888888888 799998888777888999888887764
No 115
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.26 E-value=9.1 Score=27.26 Aligned_cols=45 Identities=11% Similarity=0.144 Sum_probs=37.5
Q ss_pred eeEecceeEEEEcCCC---cEEEeecCCCCHHHHHHHHHHHHHHHHhh
Q psy17586 38 FQVDHTIIMYLIDPEG---LFVDYYGQNKKPEEVSNSIIVNMMKYENL 82 (106)
Q Consensus 38 Y~VDHSa~iYLmDPdG---rfv~~f~~~~speeiAe~Ir~~l~~~~~~ 82 (106)
|.++.--++.+++|.| +.+..+.-..+++++.+.|+..+.+++..
T Consensus 126 ~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e~~~~~ 173 (178)
T 2ec4_A 126 QKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIFTAQ 173 (178)
T ss_dssp SCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHHHhhHh
Confidence 6678888999998875 56777777889999999999999888743
No 116
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=70.48 E-value=3.1 Score=24.87 Aligned_cols=37 Identities=14% Similarity=0.134 Sum_probs=29.4
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIV 74 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~ 74 (106)
.|-|.....++++ ++|+.+..+.-..+++++.+.|++
T Consensus 69 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 105 (107)
T 2i4a_A 69 AYQVRSIPTLMLV-RDGKVIDKKVGALPKSQLKAWVES 105 (107)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHH
T ss_pred hcCCCccCEEEEE-eCCEEEEEecCCCCHHHHHHHHHh
Confidence 4778888888888 999999877766778887776654
No 117
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=70.39 E-value=5.5 Score=25.60 Aligned_cols=40 Identities=8% Similarity=0.016 Sum_probs=32.8
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
..|-|...-.++++ ++|+.+..+.-..+.+++.+.|.+++
T Consensus 88 ~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 88 PKYGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp GGGTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCCccCEEEEE-eCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 35889988899999 99999887776778888888777665
No 118
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=69.26 E-value=7.9 Score=25.02 Aligned_cols=43 Identities=16% Similarity=-0.007 Sum_probs=33.9
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
.|-|...-.++++ ++|+.+..+.-..+++++.+.|..++.+..
T Consensus 73 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 115 (140)
T 3hz4_A 73 KYGVQGTPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDMLQHGE 115 (140)
T ss_dssp HHTCCEESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred HCCCCcCCEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHhcccc
Confidence 4667766766666 899999888777889999999999996543
No 119
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=68.79 E-value=5.8 Score=23.76 Aligned_cols=39 Identities=3% Similarity=-0.004 Sum_probs=29.4
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.....++++ ++|+.+..+.-..+.+++.+.|+.++
T Consensus 68 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 68 EYGIRSIPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp HHTCCSSCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred HCCCCcCCEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 4777777776666 89999887777778888888777654
No 120
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=67.97 E-value=2 Score=25.86 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=29.6
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|.....++++ ++|+.+..+.-..+++++.+.|.++
T Consensus 66 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 66 QFGIMSIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTT
T ss_pred HcCCccccEEEEE-eCCeEEEEEecCCCHHHHHHHHHHH
Confidence 4778888889999 8999888777667777777766543
No 121
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=67.74 E-value=6.8 Score=24.48 Aligned_cols=39 Identities=13% Similarity=0.150 Sum_probs=30.8
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.-.-.++++ ++|+.+..+.-..+++++.+.|++++
T Consensus 80 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 80 EYEVSAVPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HcCCCcccEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 4778888888888 89999887776668888888777665
No 122
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=67.53 E-value=3 Score=24.84 Aligned_cols=39 Identities=13% Similarity=0.131 Sum_probs=30.9
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.....++++ ++|+.+..+.-..+.+++.+.|..++
T Consensus 67 ~~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 67 RYRVMSIPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred hCCCCcCCEEEEE-eCCcEeeeEeCCCCHHHHHHHHHHHh
Confidence 4778888888888 89999887776677888888777655
No 123
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=64.78 E-value=4.4 Score=24.15 Aligned_cols=38 Identities=13% Similarity=0.113 Sum_probs=29.8
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|.....+++++ +|+.+..+.-..+.+++.+.|.++
T Consensus 68 ~~~v~~~Pt~~~~~-~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 68 KYEVMSIPTLIVFK-DGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp HTTCCSBSEEEEEE-TTEEEEEEESCCCHHHHHHHHHTT
T ss_pred hCCCcccCEEEEEe-CCeEEEEEeCCCCHHHHHHHHHHh
Confidence 47788888888885 999998887777888888776653
No 124
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=63.76 E-value=9.8 Score=24.57 Aligned_cols=40 Identities=13% Similarity=0.177 Sum_probs=33.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|...-.++|+ .+|+.+..+.-..+.+++.+.|+.++.
T Consensus 104 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 104 RFRIRSIPTIMLY-RNGKMIDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred HCCCCccCEEEEE-ECCeEEEEEeCCCCHHHHHHHHHHHhc
Confidence 4778888887777 699999988877889999998888775
No 125
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=63.00 E-value=5.6 Score=23.61 Aligned_cols=38 Identities=8% Similarity=0.030 Sum_probs=28.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|.....++++ ++|+.+..+.-..+++++.+.|.++
T Consensus 67 ~~~v~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 67 QYNIRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHH
T ss_pred hCCCCcccEEEEE-eCCeEEEEEecCCCHHHHHHHHHhh
Confidence 3667777776666 7999988777667788888777654
No 126
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=62.83 E-value=7.8 Score=23.46 Aligned_cols=39 Identities=8% Similarity=-0.020 Sum_probs=29.4
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.....++++ ++|+.+..+.-..+++++.+.|..+|
T Consensus 72 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 72 KYGVMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHHH
T ss_pred hCCCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 3667766666665 89999888777777888888777765
No 127
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=61.67 E-value=12 Score=22.69 Aligned_cols=38 Identities=13% Similarity=0.019 Sum_probs=25.9
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|..... ++++++|+.+..+.-. .++++.+.|..++
T Consensus 73 ~~~v~~~Pt-~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 73 ELGIRVVPT-FKILKENSVVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp HHCCSBSSE-EEEESSSSEEEEEESS-CHHHHHHHHHHHH
T ss_pred HcCCCeeeE-EEEEeCCcEEEEEcCC-CHHHHHHHHHHhh
Confidence 377776665 6778999988766543 4777776665543
No 128
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=59.98 E-value=6.2 Score=26.35 Aligned_cols=22 Identities=9% Similarity=-0.059 Sum_probs=17.4
Q ss_pred eEecceeEEEEcCCCcEEEeecC
Q psy17586 39 QVDHTIIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 39 ~VDHSa~iYLmDPdGrfv~~f~~ 61 (106)
.+.|...+||+| +|+++..+..
T Consensus 124 ~~~~~p~~~vid-~G~i~~~~~~ 145 (162)
T 1tp9_A 124 GTRSRRFALLVD-DLKVKAANIE 145 (162)
T ss_dssp EEEECCEEEEEE-TTEEEEEEEC
T ss_pred CccceeEEEEEE-CCEEEEEEee
Confidence 345788899999 9999887743
No 129
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=59.90 E-value=8 Score=23.40 Aligned_cols=40 Identities=13% Similarity=-0.048 Sum_probs=28.0
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
..|-|.....+++++ +|+.+..+.-..+++++.+.|.+++
T Consensus 65 ~~~~v~~~Pt~~~~~-~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 65 GRYAVFTGPTVLLFY-NGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp -----CCCCEEEEEE-TTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred HhcCCCCCCEEEEEe-CCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 458888888888885 9999988877778888888776543
No 130
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=59.61 E-value=11 Score=23.94 Aligned_cols=39 Identities=15% Similarity=0.237 Sum_probs=28.7
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|...-.++++ ++|+.+..+.-. +++++.+.|..++.
T Consensus 94 ~~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 94 SWEIKATPTFFFL-RDGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp HTTCCEESEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred HcCCCcccEEEEE-cCCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 4777777777777 999998876544 77887777776664
No 131
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=59.55 E-value=9.9 Score=23.71 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=28.1
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|...-.++++ ++|+.+..+.-. +++++.+.|.++
T Consensus 79 ~~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 79 ECEVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp HTTCCSSSEEEEE-SSSSEEEEEESC-CHHHHHHHHHHH
T ss_pred HcCCccccEEEEE-eCCeEEEEEcCC-CHHHHHHHHHHh
Confidence 4777777777777 899988877655 888888877765
No 132
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=59.38 E-value=12 Score=22.54 Aligned_cols=38 Identities=5% Similarity=0.012 Sum_probs=27.0
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.....++++ ++|+.+..+.-. +++++.+.|..++
T Consensus 73 ~~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 73 AAGITAMPTFHVY-KDGVKADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp HHTCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred HcCCCcccEEEEE-ECCeEEEEEcCC-CHHHHHHHHHHHh
Confidence 4667777665554 899988776544 7888887777665
No 133
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=58.74 E-value=4.6 Score=25.90 Aligned_cols=39 Identities=8% Similarity=-0.008 Sum_probs=31.3
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
..|-|.....++++ ++|+.+..+.-..+++++.+.|..+
T Consensus 83 ~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 83 PKYGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp GGGTCCBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTT
T ss_pred HHcCCCccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHH
Confidence 35889999999999 9999998777667788887766543
No 134
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=57.42 E-value=9.3 Score=22.63 Aligned_cols=37 Identities=14% Similarity=0.085 Sum_probs=28.4
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|.....++++ ++|+.+..+.-. +++++.+.|.++
T Consensus 68 ~~~v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 68 ESEVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp HTTCCBSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred HcCCCcCcEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHh
Confidence 4778888888888 789888777655 888888777664
No 135
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=57.15 E-value=13 Score=23.68 Aligned_cols=39 Identities=10% Similarity=0.092 Sum_probs=30.9
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|...-.++++ ++|+.+..+.-..+.+++.+.|..++
T Consensus 99 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 99 RYGVRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HCCCCccCEEEEE-eCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 4777777777777 79999888777778888888887766
No 136
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=56.79 E-value=9.5 Score=23.32 Aligned_cols=19 Identities=21% Similarity=0.494 Sum_probs=16.6
Q ss_pred eeEEEEcCCCcEEEeecCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~ 62 (106)
..+|+.||+|..+.++.+.
T Consensus 113 ~~~~~~DPdG~~iel~~~~ 131 (133)
T 3ey7_A 113 TSFYFRDPDGNLIEVSTYS 131 (133)
T ss_dssp EEEEEECTTCCEEEEEESC
T ss_pred EEEEEECCCCCEEEEEecC
Confidence 6899999999999988764
No 137
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=54.94 E-value=14 Score=23.25 Aligned_cols=38 Identities=16% Similarity=0.199 Sum_probs=28.9
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|...-.++|+ ++|+ +..+.-..+.+++.+.|.+++
T Consensus 86 ~~~v~~~Pt~~~~-~~G~-~~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 86 KFDVSGYPTIKIL-KKGQ-AVDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp HTTCCSSSEEEEE-ETTE-EEECCSCCCHHHHHHHHHHHH
T ss_pred HCCCCccCeEEEE-ECCc-EEEcCCCCCHHHHHHHHHHhc
Confidence 4778888888888 7899 555555677888888777766
No 138
>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2
Probab=54.25 E-value=9 Score=24.25 Aligned_cols=22 Identities=9% Similarity=0.160 Sum_probs=17.7
Q ss_pred cceeEEEEcCCCcEEEeecCCC
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~~ 63 (106)
....+|+.||+|..+.++....
T Consensus 103 ~~~~~~~~DPdG~~iel~~~~~ 124 (139)
T 1r9c_A 103 EGRSIYFYDDDNHMFELHTGTL 124 (139)
T ss_dssp -CCEEEEECTTSCEEEEECCCH
T ss_pred CeEEEEEECCCCCEEEEEeCCh
Confidence 3567899999999999987544
No 139
>3m2o_A Glyoxalase/bleomycin resistance protein; unknown function, structural genomics, putative glyoxylase/B resistance protein; HET: PG4; 1.35A {Rhodopseudomonas palustris} PDB: 3vcx_A*
Probab=54.15 E-value=9 Score=25.42 Aligned_cols=27 Identities=15% Similarity=0.247 Sum_probs=15.4
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEEVSN 70 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~speeiAe 70 (106)
..+|+.||+|..+.++.+....++.++
T Consensus 127 ~~~~~~DPdG~~iel~~~~~~~~~~~~ 153 (164)
T 3m2o_A 127 RHFITADPNGVLIDIIKPIPPSANYAA 153 (164)
T ss_dssp EEEEEECTTCCEEEEEC----------
T ss_pred EEEEEECCCCCEEEEEEECCCChHHHH
Confidence 468999999999999887654444433
No 140
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=54.05 E-value=11 Score=22.57 Aligned_cols=39 Identities=10% Similarity=0.157 Sum_probs=28.9
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|.....++++ ++|+.+..+.- .+++++.+.|++++.
T Consensus 74 ~~~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 74 EWNVEAMPTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp HHHCSSTTEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHHHH
T ss_pred hCCCCcccEEEEE-eCCEEEEEEec-CCHHHHHHHHHHhhc
Confidence 4777777777776 79998877654 577888888877663
No 141
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=53.72 E-value=9.8 Score=23.39 Aligned_cols=19 Identities=21% Similarity=0.581 Sum_probs=15.2
Q ss_pred eEEEEcCCCcEEEeecCCC
Q psy17586 45 IMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 45 ~iYLmDPdGrfv~~f~~~~ 63 (106)
.+|+.||+|..+.++....
T Consensus 110 ~~~~~DPdG~~iel~~~~~ 128 (135)
T 1f9z_A 110 IAFVEDPDGYKIELIEEKD 128 (135)
T ss_dssp EEEEECTTSCEEEEEEC--
T ss_pred EEEEECCCCCEEEEEecCC
Confidence 5789999999999987654
No 142
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=53.70 E-value=15 Score=24.40 Aligned_cols=40 Identities=8% Similarity=0.033 Sum_probs=32.4
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|...-.++|+ ++|+.+..+.-..+.+++.+.|++++.
T Consensus 113 ~~~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 113 RHRIQGIPAFILF-HKGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HcCCCcCCEEEEE-eCCeEEEEecCCCCHHHHHHHHHHHhc
Confidence 4778888888888 799999888777788888888877763
No 143
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=53.52 E-value=11 Score=23.74 Aligned_cols=18 Identities=17% Similarity=0.340 Sum_probs=15.5
Q ss_pred eeEEEEcCCCcEEEeecC
Q psy17586 44 IIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~ 61 (106)
-.+|+.||+|..+.++.+
T Consensus 114 ~~~~~~DPdGn~iel~~~ 131 (132)
T 3sk2_A 114 RTFLISDPDGHIIRVCPL 131 (132)
T ss_dssp EEEEEECTTCCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeC
Confidence 568999999999998764
No 144
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=52.56 E-value=14 Score=21.67 Aligned_cols=37 Identities=16% Similarity=0.256 Sum_probs=26.0
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|.....++++ .+|+.+..+.- .+++++.+.|+++
T Consensus 67 ~~~v~~~Pt~~~~-~~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 67 KYSVTAMPTFVFI-KDGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred HcCCccccEEEEE-eCCcEEEEEeC-CCHHHHHHHHHhh
Confidence 4777777776666 49998877654 5777777766654
No 145
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=52.50 E-value=9 Score=25.21 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=17.3
Q ss_pred eeEEEEcCCCcEEEeecCCCCH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKP 65 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~sp 65 (106)
..+|+.||+|..+.++.+...+
T Consensus 101 ~~~~~~DPdG~~iel~~~~~~~ 122 (144)
T 3r6a_A 101 RNMTVRHSDGSVIEYVEHSKIE 122 (144)
T ss_dssp EEEEEECTTSCEEEEEEECC--
T ss_pred eEEEEECCCCCEEEEEEcCCcc
Confidence 4689999999999999776544
No 146
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=52.17 E-value=3.7 Score=28.34 Aligned_cols=42 Identities=5% Similarity=-0.115 Sum_probs=27.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCC-------CC---HHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQN-------KK---PEEVSNSIIVNMMK 78 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~-------~s---peeiAe~Ir~~l~~ 78 (106)
.|.|.-...++++||+|+.+.-+.-. .. .+++.+.++..+++
T Consensus 95 ~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al~~ 146 (151)
T 3ph9_A 95 SPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKALRL 146 (151)
T ss_dssp CTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHHSC
T ss_pred hcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHHHH
Confidence 46677778899999999987755333 33 34556655555443
No 147
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=51.87 E-value=10 Score=24.35 Aligned_cols=16 Identities=13% Similarity=-0.033 Sum_probs=13.9
Q ss_pred eEEEEcCCCcEEEeec
Q psy17586 45 IMYLIDPEGLFVDYYG 60 (106)
Q Consensus 45 ~iYLmDPdGrfv~~f~ 60 (106)
.+|+-||||..+.++-
T Consensus 117 ~~~f~DPDGn~iEi~~ 132 (149)
T 4gym_A 117 GRSFHDLDGHLWEVMW 132 (149)
T ss_dssp EEEEECTTCCEEEEEE
T ss_pred EEEEEcCCCCEEEEEE
Confidence 5799999999998873
No 148
>2nnw_A NOP5/NOP56 related protein; box C/D; 2.70A {Pyrococcus furiosus} PDB: 3nvi_A 3nmu_A 3nvk_A* 3nvm_A
Probab=51.55 E-value=12 Score=30.43 Aligned_cols=36 Identities=22% Similarity=0.341 Sum_probs=31.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSI 72 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~I 72 (106)
-|++.|...+|.+|.+|+++.+.+...+++++++.+
T Consensus 13 ~~l~~~~~G~~~~~e~g~~~~~~~f~~~~~al~~~~ 48 (376)
T 2nnw_A 13 AFISENVRGIYAFDENGNLIEKRYFTDKPEKVLDQL 48 (376)
T ss_dssp -CEEECSSEEEEBCSSSCBCCCEECSSCHHHHHHHH
T ss_pred HHHHhccceeEEEcCCCceEeeeeCCChHHHHHHHH
Confidence 399999999999999999999999999888866553
No 149
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=51.30 E-value=13 Score=23.38 Aligned_cols=20 Identities=20% Similarity=0.526 Sum_probs=16.9
Q ss_pred eeEEEEcCCCcEEEeecCCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~ 63 (106)
..+|+.||+|..+.++....
T Consensus 134 ~~~~~~DPdG~~iel~~~~~ 153 (156)
T 3kol_A 134 RGVYFYDPDGFMIEIRCDPE 153 (156)
T ss_dssp EEEEEECTTSCEEEEEECCC
T ss_pred cEEEEECCCCCEEEEEecCC
Confidence 47899999999999987654
No 150
>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*
Probab=51.24 E-value=8.4 Score=25.79 Aligned_cols=22 Identities=23% Similarity=0.596 Sum_probs=17.9
Q ss_pred eeEEEEcCCCcEEEeecCCCCH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKP 65 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~sp 65 (106)
..+|+.||+|..+.++....-|
T Consensus 160 ~~~~~~DPdG~~iel~~~~~~~ 181 (184)
T 2za0_A 160 GLAFIQDPDGYWIEILNPNKIA 181 (184)
T ss_dssp TCEEEECTTCCEEEEECTTTGG
T ss_pred eEEEEECCCCCEEEEEecCccc
Confidence 3689999999999998765544
No 151
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=51.18 E-value=9.3 Score=25.12 Aligned_cols=24 Identities=13% Similarity=0.248 Sum_probs=17.0
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEE 67 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~spee 67 (106)
..+|+.||+|..+.++....++++
T Consensus 106 ~~~~~~DPdG~~iel~~~~~~a~~ 129 (148)
T 3rhe_A 106 YTFVGVDPDEHRLRIFCLKRTAEN 129 (148)
T ss_dssp EEEEEECTTCCEEEEEEEC-----
T ss_pred cEEEEECCCCCEEEEEEcChhHhh
Confidence 568999999999999987766554
No 152
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=51.01 E-value=20 Score=25.85 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=27.7
Q ss_pred ceeEEEEcCCCcEEEeecCC----CCHHHHHHHHHHHHHHH
Q psy17586 43 TIIMYLIDPEGLFVDYYGQN----KKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~----~speeiAe~Ir~~l~~~ 79 (106)
|..+-|+ .||+++-+++.. .++++|++.|.....++
T Consensus 107 SPS~ALf-KdGelVh~ieRh~IEGr~a~~Ia~~L~~afd~~ 146 (147)
T 3fhk_A 107 SPSMALL-KGKEVVHFIPRHEIEGHDMEEIMKNLTAAFDAH 146 (147)
T ss_dssp SSEEEEE-ETTEEEEEECGGGTTTSCHHHHHHHHHHHHHHH
T ss_pred Cchheee-eCCEEEEEeehhhcCCCCHHHHHHHHHHHHHhh
Confidence 4444455 899999999764 48899999998877654
No 153
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=51.00 E-value=19 Score=21.64 Aligned_cols=39 Identities=18% Similarity=0.255 Sum_probs=28.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|.|.....++++ ++|+.+..+.- .+++++.+.|.+++.
T Consensus 76 ~~~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 76 AYNVEAMPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp HTTCCSBSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHHC
T ss_pred HcCCCcCcEEEEE-eCCeEEEEecC-CCHHHHHHHHHHHhc
Confidence 4777777776666 89998877654 578888887777663
No 154
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=50.40 E-value=13 Score=21.90 Aligned_cols=37 Identities=11% Similarity=0.282 Sum_probs=24.8
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|.....++++ ++|+.+..+.- .+++++.+.|+++
T Consensus 69 ~~~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 69 EYNISSMPTFVFL-KNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred HcCCCcccEEEEE-cCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 3667766665554 79998887655 6777776666543
No 155
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=50.16 E-value=13 Score=24.96 Aligned_cols=41 Identities=10% Similarity=0.002 Sum_probs=29.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
.|-|.---.++++ .+|+.+..+.-..+.+++.+.|..++..
T Consensus 86 ~~~V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 86 RFNVRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp TTTCCSSSEEEEE-SCC----CEESCCCHHHHHHHHHHHHC-
T ss_pred hcCCCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 5888888888999 8999998887677888888888877743
No 156
>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}
Probab=50.11 E-value=12 Score=23.58 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=16.6
Q ss_pred eeEEEEcCCCcEEEeecCCC--CHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNK--KPEEV 68 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~--speei 68 (106)
-.+|+.||+|..+.++.+.. +++++
T Consensus 105 ~~~~~~DPdG~~iel~~~~~~~~~~e~ 131 (137)
T 3itw_A 105 RQYLVRDLEGHLWEFTRHLRDVPPREW 131 (137)
T ss_dssp EEEEEECSSSCEEEEEECC--------
T ss_pred EEEEEECCCCCEEEEEEEcCCCCHHHH
Confidence 57899999999999987643 34444
No 157
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=49.91 E-value=34 Score=22.79 Aligned_cols=43 Identities=7% Similarity=-0.137 Sum_probs=36.5
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~ 79 (106)
..|-|.-+-.+.|++ +|+-+.-+.--.+++++.+.|..++.+.
T Consensus 70 ~~~~V~g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~~l~~~ 112 (116)
T 3dml_A 70 LARPVTFTPTFVLMA-GDVESGRLEGYPGEDFFWPMLARLIGQA 112 (116)
T ss_dssp CSSCCCSSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHHHHhhc
Confidence 358888888999999 9999999887888999999998887654
No 158
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=49.88 E-value=16 Score=22.39 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=26.9
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|.-.-.+++++ +|+.+..+.-. +++++.+.|+++
T Consensus 72 ~~~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 72 KNEVSAMPTLLLFK-NGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp HTTCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHH
T ss_pred HcCCCccCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHhh
Confidence 47787788888887 99988876544 677777666554
No 159
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=49.68 E-value=9.6 Score=23.39 Aligned_cols=37 Identities=14% Similarity=0.095 Sum_probs=29.0
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIV 74 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~ 74 (106)
.|-|.-.-.++++ ++|+.+..+.-..+.+++.+.|..
T Consensus 66 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 102 (112)
T 2voc_A 66 KYGVMSIPTLLVL-KDGEVVETSVGFKPKEALQELVNK 102 (112)
T ss_dssp HTTCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHT
T ss_pred HcCCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHH
Confidence 4778888889999 999998888777777777665544
No 160
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=55.03 E-value=3.5 Score=24.32 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=28.0
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
..|-|.....++++ ++|+.+..+.-..+.+++.+.|.++
T Consensus 67 ~~~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 67 AQYGIRSIPTLLLF-KNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 35778888888888 8999887666555666666666544
No 161
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=49.28 E-value=16 Score=23.38 Aligned_cols=39 Identities=8% Similarity=-0.014 Sum_probs=28.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|.-.-.++++ ++|+.+..+.- .+++++.+.|..++.
T Consensus 85 ~~~v~~~Pt~~i~-~~G~~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 85 KCRVLQLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHHH
T ss_pred HcCCCcccEEEEE-eCCeEEEEEeC-CCHHHHHHHHHHHhc
Confidence 3667777765555 89998877654 578888887777764
No 162
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=48.81 E-value=12 Score=23.80 Aligned_cols=20 Identities=15% Similarity=0.356 Sum_probs=14.6
Q ss_pred eEEEEcCCCcEEEeecCCCC
Q psy17586 45 IMYLIDPEGLFVDYYGQNKK 64 (106)
Q Consensus 45 ~iYLmDPdGrfv~~f~~~~s 64 (106)
.+|+.||+|..+.+...+.+
T Consensus 104 ~~~~~DPdGn~iel~~~~~~ 123 (128)
T 3g12_A 104 KAIVLDPDGHSIELCELEGH 123 (128)
T ss_dssp EEEEECTTCCEEEEEC----
T ss_pred EEEEECCCCCEEEEEEeccc
Confidence 48999999999999876653
No 163
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=48.64 E-value=21 Score=21.83 Aligned_cols=38 Identities=18% Similarity=0.193 Sum_probs=26.9
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|...-.++++ ++|+.+..+.-.. ++++.+.|+.++
T Consensus 82 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~l 119 (122)
T 2vlu_A 82 QFSVEAMPTFLFM-KEGDVKDRVVGAI-KEELTAKVGLHA 119 (122)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred HcCCCcccEEEEE-eCCEEEEEEeCcC-HHHHHHHHHHHh
Confidence 4777777765555 8999887765555 777777776665
No 164
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=47.34 E-value=25 Score=20.80 Aligned_cols=37 Identities=11% Similarity=0.113 Sum_probs=28.4
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIV 74 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~ 74 (106)
.|-|.....++++ ++|+.+..+.-..+.+++.+.|++
T Consensus 73 ~~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 73 KYSVRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHH
T ss_pred hcCCCcccEEEEE-eCCcEEEeccCCcCHHHHHHHHHh
Confidence 4777777776666 899998888777788888776654
No 165
>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A
Probab=46.99 E-value=18 Score=22.34 Aligned_cols=21 Identities=10% Similarity=0.143 Sum_probs=17.4
Q ss_pred ceeEEEEcCCCcEEEeecCCC
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~ 63 (106)
...+|+.||+|..+.++....
T Consensus 104 ~~~~~~~DPdG~~iel~~~~~ 124 (133)
T 2p7o_A 104 GRSIYFYDFDNHLFELHAGTL 124 (133)
T ss_dssp CCEEEEECSSSCEEEEECSSC
T ss_pred eeEEEEECCCCCEEEEEcCCh
Confidence 356899999999999987654
No 166
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=46.76 E-value=18 Score=23.67 Aligned_cols=39 Identities=5% Similarity=0.141 Sum_probs=29.8
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|.-.-.+++++ +|+.+..+.- .+++++.+.|++++.
T Consensus 80 ~~~v~~~Pt~~~~~-~G~~~~~~~G-~~~~~l~~~i~~~l~ 118 (153)
T 2wz9_A 80 KYEISSVPTFLFFK-NSQKIDRLDG-AHAPELTKKVQRHAS 118 (153)
T ss_dssp HTTCCSSSEEEEEE-TTEEEEEEES-SCHHHHHHHHHHHSC
T ss_pred HcCCCCCCEEEEEE-CCEEEEEEeC-CCHHHHHHHHHHHhc
Confidence 47788889999999 9999887654 467777776666653
No 167
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=46.09 E-value=15 Score=23.46 Aligned_cols=20 Identities=20% Similarity=0.526 Sum_probs=15.9
Q ss_pred eeEEEEcCCCcEEEeecCCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~ 63 (106)
..+|+.||+|..+.+.....
T Consensus 126 ~~~~~~DPdG~~iEl~~~~~ 145 (152)
T 3huh_A 126 MSIYIRDPDGNLIEISQYVE 145 (152)
T ss_dssp EEEEEECTTCCEEEEEEC--
T ss_pred EEEEEECCCCCEEEEEeccc
Confidence 57899999999999986554
No 168
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=45.91 E-value=15 Score=22.00 Aligned_cols=16 Identities=25% Similarity=0.667 Sum_probs=13.6
Q ss_pred eeEEEEcCCCcEEEee
Q psy17586 44 IIMYLIDPEGLFVDYY 59 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f 59 (106)
..+|+.||+|..+.++
T Consensus 110 ~~~~~~DPdG~~iel~ 125 (126)
T 2p25_A 110 KMTFFFDPDGLPLELH 125 (126)
T ss_dssp EEEEEECTTCCEEEEE
T ss_pred EEEEEECCCCCEEEee
Confidence 5689999999988875
No 169
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=45.79 E-value=23 Score=22.55 Aligned_cols=38 Identities=11% Similarity=0.293 Sum_probs=25.2
Q ss_pred eeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 38 FQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 38 Y~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
...+|.. +.++|.+|++++.+. ..++...+...+.+.+
T Consensus 112 ~~~~~~~-l~Vvd~~g~~~Giit----~~dil~~l~~~~~~~~ 149 (150)
T 3lqn_A 112 MTIDHPF-ICAVNEDGYFEGILT----RRAILKLLNKKVRQHN 149 (150)
T ss_dssp HHHHCSE-EEEECTTCBEEEEEE----HHHHHHHHHHHC----
T ss_pred HHHhCCE-EEEECCCCcEEEEEE----HHHHHHHHHHHhHhhc
Confidence 3344554 889999999999965 6777777766665443
No 170
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=45.75 E-value=20 Score=22.91 Aligned_cols=42 Identities=14% Similarity=-0.109 Sum_probs=30.4
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~ 79 (106)
.|-|.-.-.+.+++ +|+.+..+.-..+++.+.+.|++++...
T Consensus 87 ~~~v~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 87 KAGVEGTPTLVFYK-EGRIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp HHTCCSSSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHC---
T ss_pred HcCCceeCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 46777777555555 9999998887788888888888877543
No 171
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=45.46 E-value=24 Score=24.28 Aligned_cols=40 Identities=10% Similarity=0.180 Sum_probs=32.3
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|...-.++++ ++|+.+..+.-..+++++.+.|..++.
T Consensus 163 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~l~ 202 (210)
T 3apq_A 163 MKGVNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQHVR 202 (210)
T ss_dssp HTTCCSSSEEEEE-CTTSCCEECCSCCCHHHHHHHHHHHHH
T ss_pred HcCCCcCCeEEEE-ECCCceeEecCCCCHHHHHHHHHHhCc
Confidence 4778888888888 999988887777788888888887763
No 172
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=45.45 E-value=22 Score=24.64 Aligned_cols=36 Identities=6% Similarity=-0.017 Sum_probs=27.1
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~ 79 (106)
+=.++++.+|+++....--.+++++.+.|+.++++.
T Consensus 170 ~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~~~~ 205 (208)
T 3kzq_A 170 YPSLVLQINDAYFPIEVDYLSTEPTLKLIRERIIEN 205 (208)
T ss_dssp SSEEEEEETTEEEEECCCSSCSHHHHHHHHHHHHHT
T ss_pred ccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHHhcc
Confidence 345667778888777666667899999999988654
No 173
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=45.40 E-value=23 Score=21.74 Aligned_cols=37 Identities=14% Similarity=0.035 Sum_probs=24.7
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|..... ++++++|+.+..+.-. .++++.+.|..+
T Consensus 86 ~~~v~~~Pt-~~~~~~G~~~~~~~G~-~~~~l~~~i~~~ 122 (124)
T 1faa_A 86 ELGIRVVPT-FKILKENSVVGEVTGA-KYDKLLEAIQAA 122 (124)
T ss_dssp HHCCSSSSE-EEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred HcCCCeeeE-EEEEeCCcEEEEEcCC-CHHHHHHHHHHh
Confidence 377776665 5666999998776543 367766665543
No 174
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=45.21 E-value=16 Score=22.03 Aligned_cols=17 Identities=24% Similarity=0.628 Sum_probs=14.3
Q ss_pred ceeEEEEcCCCcEEEee
Q psy17586 43 TIIMYLIDPEGLFVDYY 59 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f 59 (106)
...+|+.||+|..+.++
T Consensus 117 ~~~~~~~DPdG~~iel~ 133 (134)
T 3l7t_A 117 KKMAFFFDPDGLPLELH 133 (134)
T ss_dssp CEEEEEECTTCCEEEEE
T ss_pred eEEEEEECCCCCEEEEe
Confidence 45789999999998875
No 175
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.18 E-value=10 Score=23.68 Aligned_cols=49 Identities=20% Similarity=0.292 Sum_probs=33.0
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcc
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWF 88 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~ 88 (106)
.|-|.-.-.++++ ++|+. ..+.-..+.+++.+.|.+++. ....+++.|.
T Consensus 72 ~~~v~~~Pt~~~~-~~G~~-~~~~G~~~~~~l~~~l~~~~~-~~~~~~~~~~ 120 (126)
T 1x5e_A 72 RFIINALPTIYHC-KDGEF-RRYQGPRTKKDFINFISDKEW-KSIEPVSSWF 120 (126)
T ss_dssp HTTCCSSSEEEEE-ETTEE-EECCSCCCHHHHHHHHHTCGG-GGSCEECCCC
T ss_pred HcCCcccCEEEEE-eCCeE-EEeecCCCHHHHHHHHHHHhh-ccCCCchhhh
Confidence 4778888888888 89995 444445677777777666552 2344556676
No 176
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=45.06 E-value=34 Score=20.48 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=27.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
.|-|...-.++++ .+|+.+..+.-. .++++.+.|..++.
T Consensus 71 ~~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 71 LFEISAVPYFIII-HKGTILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEECSC-CHHHHHHHHHHHHH
T ss_pred HcCCCcccEEEEE-ECCEEEEEecCC-CHHHHHHHHHHHHh
Confidence 4777777777777 799988876543 56667777776664
No 177
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=44.71 E-value=17 Score=21.98 Aligned_cols=18 Identities=22% Similarity=0.488 Sum_probs=15.3
Q ss_pred eeEEEEcCCCcEEEeecC
Q psy17586 44 IIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~ 61 (106)
..+|+.||+|..+.++.+
T Consensus 101 ~~~~~~DPdG~~iel~~~ 118 (119)
T 2pjs_A 101 QRLFLRDPFGKLINILSH 118 (119)
T ss_dssp EEEEEECTTSCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEec
Confidence 578999999999988753
No 178
>3uh9_A Metallothiol transferase FOSB 2; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: MSE; 1.60A {Bacillus anthracis}
Probab=44.58 E-value=18 Score=22.83 Aligned_cols=21 Identities=19% Similarity=0.456 Sum_probs=17.5
Q ss_pred cceeEEEEcCCCcEEEeecCC
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~ 62 (106)
....+|+.||+|..+.++...
T Consensus 100 ~~~~~~~~DPdG~~iel~~~~ 120 (145)
T 3uh9_A 100 DQRSLYFTDPDGHKFEFHTGT 120 (145)
T ss_dssp GCCEEEEECTTCCEEEEESSC
T ss_pred CeeEEEEEcCCCCEEEEEcCc
Confidence 346789999999999998754
No 179
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=44.47 E-value=13 Score=23.05 Aligned_cols=19 Identities=21% Similarity=0.387 Sum_probs=16.0
Q ss_pred eeEEEEcCCCcEEEeecCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~ 62 (106)
..+|+.||+|..+.+..+.
T Consensus 111 ~~~~~~DPdGn~iel~~~~ 129 (135)
T 3rri_A 111 ETFFLIDPSNNLLEFKYYF 129 (135)
T ss_dssp EEEEEECTTCCEEEEEEES
T ss_pred EEEEEECCCCCEEEEEEEC
Confidence 4689999999999987654
No 180
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=44.19 E-value=17 Score=23.39 Aligned_cols=16 Identities=19% Similarity=0.507 Sum_probs=13.9
Q ss_pred eEEEEcCCCcEEEeec
Q psy17586 45 IMYLIDPEGLFVDYYG 60 (106)
Q Consensus 45 ~iYLmDPdGrfv~~f~ 60 (106)
.+|+.||+|..+.+..
T Consensus 131 ~~~~~DPdGn~iEl~~ 146 (147)
T 3zw5_A 131 SIYFRDPDRNLIEVSN 146 (147)
T ss_dssp EEEEECTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEec
Confidence 6899999999988764
No 181
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=44.13 E-value=17 Score=23.35 Aligned_cols=18 Identities=22% Similarity=0.695 Sum_probs=15.1
Q ss_pred ceeEEEEcCCCcEEEeec
Q psy17586 43 TIIMYLIDPEGLFVDYYG 60 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~ 60 (106)
...+|+.||+|..+.++.
T Consensus 123 ~~~~~~~DPdG~~iel~~ 140 (141)
T 3ghj_A 123 AVSLYFADPNGHALEFTA 140 (141)
T ss_dssp EEEEEEECTTCCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEE
Confidence 357999999999998864
No 182
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=44.11 E-value=7.9 Score=23.32 Aligned_cols=38 Identities=11% Similarity=0.161 Sum_probs=28.1
Q ss_pred ceeEecceeEEEEcCCCcEE--EeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFV--DYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv--~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|...-.++++ ++|+.+ ..+.-..+++++.+.|+.+
T Consensus 76 ~~~v~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 76 QYGVRGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKR 115 (120)
T ss_dssp HHTCCSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTT
T ss_pred HCCCCcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhc
Confidence 4788888899999 688876 5665566778877766544
No 183
>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A
Probab=43.70 E-value=31 Score=21.47 Aligned_cols=21 Identities=19% Similarity=0.357 Sum_probs=17.3
Q ss_pred cceeEEEEcCCCcEEEeecCC
Q psy17586 42 HTIIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~~~ 62 (106)
....+|+.||+|..+.++...
T Consensus 95 ~~~~~~~~DPdG~~iel~~~~ 115 (135)
T 1nki_A 95 EGDSFYFLDPDGHRLEAHVGD 115 (135)
T ss_dssp SSCEEEEECTTCCEEEEESCC
T ss_pred CeEEEEEECCCCCEEEEEECC
Confidence 346789999999999998654
No 184
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=43.63 E-value=17 Score=21.99 Aligned_cols=16 Identities=25% Similarity=0.380 Sum_probs=13.4
Q ss_pred eeEEEEcCCCcEEEee
Q psy17586 44 IIMYLIDPEGLFVDYY 59 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f 59 (106)
..+|+.||+|..+.++
T Consensus 111 ~~~~~~DPdG~~iel~ 126 (127)
T 3e5d_A 111 YESVVLDPEGNRIEIT 126 (127)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred EEEEEECCCCCEEEEe
Confidence 3689999999988765
No 185
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=43.60 E-value=19 Score=23.09 Aligned_cols=39 Identities=3% Similarity=0.003 Sum_probs=26.7
Q ss_pred ceeEecceeEEEE-cCCCc--EEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLI-DPEGL--FVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLm-DPdGr--fv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.-.-.++++ |++|+ .+..+.-. +++++.+.|..++
T Consensus 87 ~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l 128 (133)
T 3cxg_A 87 QHNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYC 128 (133)
T ss_dssp HTTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHS
T ss_pred hcCCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHH
Confidence 4778888888888 56666 66665433 6777777666554
No 186
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=43.04 E-value=24 Score=21.52 Aligned_cols=37 Identities=14% Similarity=0.011 Sum_probs=25.0
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|...-.++++ ++|+.+..+.- .+++++.+.|+.+
T Consensus 80 ~~~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 80 KYNISAMPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred HcCCCccceEEEE-eCCcEEEEEeC-CCHHHHHHHHHHh
Confidence 3667766665555 79998877654 5777777766554
No 187
>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}
Probab=42.74 E-value=17 Score=22.38 Aligned_cols=18 Identities=28% Similarity=0.563 Sum_probs=15.2
Q ss_pred eeEEEEcCCCcEEEeecC
Q psy17586 44 IIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~ 61 (106)
..+|+.||+|..+.++.+
T Consensus 107 ~~~~~~DPdG~~iel~~~ 124 (126)
T 2qqz_A 107 IRFYVSDPFGNRIEFMEN 124 (126)
T ss_dssp EEEEEECTTSCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEeC
Confidence 468999999999988754
No 188
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=42.69 E-value=44 Score=21.76 Aligned_cols=41 Identities=10% Similarity=0.003 Sum_probs=25.9
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcch
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWFE 89 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~~ 89 (106)
..+.++|. |++++++. ..++...+...+...++..+..|++
T Consensus 110 ~~lpVvd~-g~lvGiit----~~dil~~~~~~~~~~~~~~~~~~~~ 150 (160)
T 2o16_A 110 GCLPVVAK-DVLVGIIT----DSDFVTIAINLLELQEESEPDELDE 150 (160)
T ss_dssp SCEEEEET-TEEEEEEC----HHHHHHHHHHHHHHHHC--------
T ss_pred CEEEEEEC-CEEEEEEE----HHHHHHHHHHHhccccccCCcccch
Confidence 46778888 99999965 6788888888776666655555554
No 189
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=42.37 E-value=29 Score=22.45 Aligned_cols=40 Identities=8% Similarity=0.127 Sum_probs=23.0
Q ss_pred ecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcC
Q psy17586 41 DHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKK 85 (106)
Q Consensus 41 DHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~ 85 (106)
++.. +.++|.+|++++.+. ..++...+...+.+..+...+
T Consensus 114 ~~~~-lpVvd~~g~~vGiit----~~dil~~~~~~~~~~~~~~~~ 153 (159)
T 1yav_A 114 NNGF-VCVENDEQVFEGIFT----RRVVLKELNKHIRSLNKEGGS 153 (159)
T ss_dssp TCSE-EEEECTTCBEEEEEE----HHHHHHHHHHHC---------
T ss_pred hCCE-EEEEeCCCeEEEEEE----HHHHHHHHHHHHHhhcccccc
Confidence 3444 889999999999976 567777666655444443333
No 190
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=42.36 E-value=27 Score=21.27 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=29.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|.-.-.++++ ++|+.+..+.-..+++++.+.|...
T Consensus 67 ~~~v~~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 67 ELGFERVPTLVFI-RDGKVAKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp HTTCCSSCEEEEE-ESSSEEEEEESCCCHHHHHHHHHTC
T ss_pred HcCCcccCEEEEE-ECCEEEEEEcCCCCHHHHHHHHHHH
Confidence 4778888888888 8999998887667888877766543
No 191
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=41.82 E-value=16 Score=22.24 Aligned_cols=37 Identities=11% Similarity=-0.047 Sum_probs=25.4
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|...-.++++ ++|+.+..+.-. +++++.+.|.++
T Consensus 74 ~~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 74 KENITSMPTFKVY-KNGSSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHTT
T ss_pred HcCCCcccEEEEE-ECCcEEEEEeCC-CHHHHHHHHHHh
Confidence 3667766665555 699988776555 788877766554
No 192
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=41.77 E-value=18 Score=22.67 Aligned_cols=36 Identities=11% Similarity=0.083 Sum_probs=29.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSII 73 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir 73 (106)
.|-|...-.++++ ++|+.+..+.-..+++++.+.|+
T Consensus 91 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~ 126 (128)
T 3ul3_B 91 KFSVKSLPTIILL-KNKTMLARKDHFVSSNDLIALIK 126 (128)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHT
T ss_pred HcCCCCcCEEEEE-ECCEEEEEecCCCCHHHHHHHHH
Confidence 4778888888888 79999988877788888877654
No 193
>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}
Probab=41.58 E-value=20 Score=23.13 Aligned_cols=17 Identities=18% Similarity=0.344 Sum_probs=14.5
Q ss_pred eeEEEEcCCCcEEEeec
Q psy17586 44 IIMYLIDPEGLFVDYYG 60 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~ 60 (106)
-.+|+.||+|..+.++.
T Consensus 129 ~~~~~~DPdG~~iel~~ 145 (146)
T 3ct8_A 129 YAVFCEDPNRIKVEIVA 145 (146)
T ss_dssp CEEEEECTTCCEEEEEC
T ss_pred EEEEEECCCCCEEEEEe
Confidence 46899999999998874
No 194
>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2
Probab=41.45 E-value=17 Score=21.77 Aligned_cols=17 Identities=18% Similarity=0.495 Sum_probs=14.2
Q ss_pred ceeEEEEcCCCcEEEee
Q psy17586 43 TIIMYLIDPEGLFVDYY 59 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f 59 (106)
...+|+.||+|..+.++
T Consensus 96 ~~~~~~~DPdG~~iel~ 112 (113)
T 1xqa_A 96 AYTFYVEAPGGFTIEVM 112 (113)
T ss_dssp CEEEEEEETTTEEEEEE
T ss_pred cEEEEEECCCCcEEEEe
Confidence 56789999999988764
No 195
>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A
Probab=41.31 E-value=23 Score=21.93 Aligned_cols=21 Identities=19% Similarity=0.407 Sum_probs=17.1
Q ss_pred eeEEEEcCCCcEEEeecCCCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKK 64 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~s 64 (106)
..+|+.||+|..+.++.....
T Consensus 102 ~~~~~~DPdG~~iel~~~~~~ 122 (126)
T 1ecs_A 102 TMAALVDPDGTLLRLIQNELL 122 (126)
T ss_dssp EEEEEECTTSCEEEEEECCC-
T ss_pred EEEEEECCCCCEEEEecchhh
Confidence 578999999999999876553
No 196
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=41.09 E-value=25 Score=24.51 Aligned_cols=47 Identities=17% Similarity=0.200 Sum_probs=35.5
Q ss_pred ceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcch
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWFE 89 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~~ 89 (106)
.+.+.++|-+..|..--......+++++.+.++++.+++.+.+-.+.
T Consensus 19 ~~ALlvID~Q~~f~~~~~~~~~~~~~i~~i~~ll~~ar~~g~pVi~t 65 (199)
T 1j2r_A 19 TTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLV 65 (199)
T ss_dssp GEEEEEECCSTTTGGGCCBSSCHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEEecchhhhCCCcccccHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 46889999999887532223567889999999999988877665443
No 197
>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A
Probab=40.60 E-value=21 Score=22.10 Aligned_cols=18 Identities=28% Similarity=0.390 Sum_probs=15.5
Q ss_pred eeEEEEcCCCcEEEeecC
Q psy17586 44 IIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~ 61 (106)
..+|+.||+|..+.++..
T Consensus 104 ~~~~~~DPdG~~iel~~~ 121 (124)
T 1xrk_A 104 REFALRDPAGNCVHFVAE 121 (124)
T ss_dssp EEEEEECTTCCEEEEEEC
T ss_pred CEEEEECCCCCEEEEEEe
Confidence 578999999999998764
No 198
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=40.01 E-value=40 Score=23.01 Aligned_cols=46 Identities=15% Similarity=0.068 Sum_probs=33.9
Q ss_pred ceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcc
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWF 88 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~ 88 (106)
.+.+.++|-+..|..--......+++++.+.++++.+++.+.+-.+
T Consensus 4 ~~aLlvID~Q~~f~~~~~~~~~~~~~~~~i~~li~~ar~~g~pVi~ 49 (167)
T 2a67_A 4 NRALLLIDFQKGIESPTQQLYRLPAVLDKVNQRIAVYRQHHAPIIF 49 (167)
T ss_dssp SEEEEEECCBTTSCCSSCCCTTHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CcEEEEEcCcHHhcCCCCcccCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 3678899999988753112235788999999999999887766444
No 199
>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}
Probab=39.64 E-value=21 Score=22.26 Aligned_cols=18 Identities=11% Similarity=0.145 Sum_probs=15.2
Q ss_pred eeEEEEcCCCcEEEeecC
Q psy17586 44 IIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~ 61 (106)
..+|+.||+|..+.++..
T Consensus 110 ~~~~~~DPdG~~iel~~~ 127 (136)
T 2rk0_A 110 WILAFRDADNIALEAMLG 127 (136)
T ss_dssp EEEEEECTTCCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEEc
Confidence 578999999999988754
No 200
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=39.49 E-value=31 Score=24.28 Aligned_cols=42 Identities=7% Similarity=-0.174 Sum_probs=26.1
Q ss_pred eEecceeEEEEcCCCcEEEee---cCC--CCHHHHHHHHHHHHHHHH
Q psy17586 39 QVDHTIIMYLIDPEGLFVDYY---GQN--KKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 39 ~VDHSa~iYLmDPdGrfv~~f---~~~--~speeiAe~Ir~~l~~~~ 80 (106)
-|.---.+++++|+|+.+..- +.. .+.+.+.+.|..+...|+
T Consensus 101 gv~g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~~~~ 147 (173)
T 3ira_A 101 GRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEIWE 147 (173)
T ss_dssp SCCCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHHHHH
T ss_pred CCCCCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHHHHH
Confidence 355667899999999987542 221 133455565655555554
No 201
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=39.23 E-value=13 Score=24.77 Aligned_cols=23 Identities=13% Similarity=0.143 Sum_probs=19.6
Q ss_pred ceeEecceeEEEEcCC-CcEEEee
Q psy17586 37 WFQVDHTIIMYLIDPE-GLFVDYY 59 (106)
Q Consensus 37 dY~VDHSa~iYLmDPd-Grfv~~f 59 (106)
.|-|...-.+||+|++ |+++...
T Consensus 123 ~~~v~~~Pt~~lid~~~G~iv~~~ 146 (165)
T 3s9f_A 123 KYSVESIPTLIGLNADTGDTVTTR 146 (165)
T ss_dssp HTTCCSSSEEEEEETTTCCEEESC
T ss_pred HcCCCCCCEEEEEeCCCCEEEecc
Confidence 4778888999999998 9998763
No 202
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=39.03 E-value=8.3 Score=23.77 Aligned_cols=43 Identities=7% Similarity=0.006 Sum_probs=32.2
Q ss_pred ceeEecceeEEEEcCCCcEEEeecC---CCCHHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQ---NKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~---~~speeiAe~Ir~~l~~~ 79 (106)
.|-|...-.++++++.|....+.+. ..+++++.+.|..++.+.
T Consensus 70 ~~~v~~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 70 KAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLETL 115 (122)
T ss_dssp HTTCCSSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHHCC
T ss_pred HcCCCccceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHHHhh
Confidence 4788889999999988875444443 368888988888887543
No 203
>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A
Probab=38.84 E-value=25 Score=21.72 Aligned_cols=18 Identities=22% Similarity=0.285 Sum_probs=14.9
Q ss_pred eeEEEEcCCCcEEEeecC
Q psy17586 44 IIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~ 61 (106)
..+|+.||+|..+.++.+
T Consensus 104 ~~~~~~DPdG~~iel~~~ 121 (122)
T 1qto_A 104 REFAVRDPAGNCVHFTAG 121 (122)
T ss_dssp EEEEEECTTSCEEEEEEC
T ss_pred cEEEEECCCCCEEEEecC
Confidence 467999999999988753
No 204
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=38.31 E-value=28 Score=21.61 Aligned_cols=38 Identities=11% Similarity=0.114 Sum_probs=26.6
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.-...++++ ++|+.+..+.-. +++++.+.|..++
T Consensus 83 ~~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 83 EVGIRAMPTFVFF-KNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp HHTCCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred HcCCCcccEEEEE-ECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 4667777777666 699988776544 7888777666553
No 205
>2i5i_A UPF0249 protein EF_3048; putative cellobiose-phosphate cleavage protein, structural G joint center for structural genomics, JCSG; HET: MSE; 1.70A {Enterococcus faecalis} SCOP: c.6.2.8
Probab=37.80 E-value=19 Score=27.02 Aligned_cols=38 Identities=21% Similarity=0.305 Sum_probs=29.1
Q ss_pred EEcCCCcEEEe---ecCCCCHHHHHHHHHHHHHHHHhhhcCC
Q psy17586 48 LIDPEGLFVDY---YGQNKKPEEVSNSIIVNMMKYENLKKKS 86 (106)
Q Consensus 48 LmDPdGrfv~~---f~~~~speeiAe~Ir~~l~~~~~~~~~~ 86 (106)
|+|++|+|... +. ....+++...|+.-++++.+.|.+-
T Consensus 84 Lvd~~G~f~~~~~~~~-~~~~~ev~~El~AQi~~f~~~G~~p 124 (263)
T 2i5i_A 84 LVDEAGYFWHQSIFEE-KVNLEEVYNEWDAQIISFMKSGRRP 124 (263)
T ss_dssp GBCTTSCBCCHHHHTT-TCCHHHHHHHHHHHHHHHGGGSSCC
T ss_pred eECCCCCCCccHHHHh-cCCHHHHHHHHHHHHHHHHHcCCCC
Confidence 77888888553 33 5778999999999999998766543
No 206
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=37.75 E-value=65 Score=19.96 Aligned_cols=45 Identities=16% Similarity=0.392 Sum_probs=29.5
Q ss_pred eeecCCccccce---eeEEEEEecccccCCCCceeEecc-eeEEEEcCCCcEEEe
Q psy17586 8 HFIGGTLPLCRP---LMYSIISTIPYLLSFIFWFQVDHT-IIMYLIDPEGLFVDY 58 (106)
Q Consensus 8 ~~~~g~~~~~~~---~~y~v~~~~~~~~~~~~dY~VDHS-a~iYLmDPdGrfv~~ 58 (106)
-||-.|.+.-|+ +.|+++....... -+.++ ..+.|.||+|+.+.-
T Consensus 4 ~fi~tDr~iYrPGetV~~~~~~~~~~~~------p~~~~~~~v~l~dp~g~~v~~ 52 (102)
T 2p9r_A 4 VFVQTDKSIYKPGQTVKFRVVSMDENFH------PLNELIPLVYIQDPKGNRIAQ 52 (102)
T ss_dssp EEEEESCSEECTTCEEEEEEEEECGGGC------BCCCEEEEEEEECTTSCEEEE
T ss_pred EEEECCCcccCCCCEEEEEEEEECCCCc------CCCCCceEEEEECCCCCEEEE
Confidence 467778888777 5588877533221 12333 468899999987654
No 207
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=37.73 E-value=41 Score=23.70 Aligned_cols=16 Identities=6% Similarity=0.428 Sum_probs=12.8
Q ss_pred eeEEEEcCCCcEEEeec
Q psy17586 44 IIMYLIDPEGLFVDYYG 60 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~ 60 (106)
-.+|||| +|+.+..+-
T Consensus 137 R~tfvId-dG~V~~~~v 152 (182)
T 1xiy_A 137 RFVAIVE-NNILVKMFQ 152 (182)
T ss_dssp CEEEEEE-TTEEEEEEE
T ss_pred EEEEEEc-CCEEEEEEE
Confidence 4579999 999888774
No 208
>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2
Probab=37.39 E-value=27 Score=21.98 Aligned_cols=20 Identities=20% Similarity=0.431 Sum_probs=17.1
Q ss_pred ceeEEEEcCCCcEEEeecCC
Q psy17586 43 TIIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~ 62 (106)
...+|+.||+|..+.++...
T Consensus 99 ~~~~~~~DPdG~~iel~~~~ 118 (141)
T 1npb_A 99 GASFYFLDPDGHKLELHVGS 118 (141)
T ss_dssp SEEEEEECTTCCEEEEEECC
T ss_pred eeEEEEECCCCCEEEEEECc
Confidence 46789999999999998754
No 209
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=37.35 E-value=42 Score=22.06 Aligned_cols=42 Identities=12% Similarity=0.039 Sum_probs=29.9
Q ss_pred ceeEecceeEEEEcCCCcEE---------EeecC-CCCHHHHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFV---------DYYGQ-NKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv---------~~f~~-~~speeiAe~Ir~~l~~~ 79 (106)
.|.|.-...++ ++++|+.+ ..+.- ..+.+++.+.|..+++..
T Consensus 72 ~~~v~~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~ 123 (149)
T 3gix_A 72 YFDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGA 123 (149)
T ss_dssp HTTCCSSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHH
T ss_pred HcCCCccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHh
Confidence 36666555555 77899988 55544 678889988888877543
No 210
>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0
Probab=37.10 E-value=22 Score=22.40 Aligned_cols=21 Identities=10% Similarity=0.208 Sum_probs=17.0
Q ss_pred eeEEEEcCCCcEEEeecCCCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKK 64 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~s 64 (106)
..+|+.||+|..+.+..+...
T Consensus 107 ~~~~~~DPdG~~iel~~~~~~ 127 (134)
T 3fcd_A 107 REFQVRMPDGDWLNFTAPLAE 127 (134)
T ss_dssp EEEEEECTTSCEEEEEEECCT
T ss_pred EEEEEECCCCCEEEEEEcccc
Confidence 468999999999998866543
No 211
>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}
Probab=36.88 E-value=25 Score=26.96 Aligned_cols=25 Identities=8% Similarity=0.214 Sum_probs=21.0
Q ss_pred eeEecceeEEEEcCCCcEEEeecCC
Q psy17586 38 FQVDHTIIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 38 Y~VDHSa~iYLmDPdGrfv~~f~~~ 62 (106)
|.-||.-++||.||+|.-+.++.-.
T Consensus 101 ~~gdhgyA~yl~dPEGn~ieiyae~ 125 (244)
T 3e0r_A 101 YKGQNGYAFEIFSPEDDLILIHAED 125 (244)
T ss_dssp EECSSSEEEEEECTTCCEEEEECCS
T ss_pred cccCCcEEEEEECCCCCeEEEEEcC
Confidence 5677888999999999999888643
No 212
>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}
Probab=36.70 E-value=26 Score=22.25 Aligned_cols=19 Identities=11% Similarity=0.312 Sum_probs=15.4
Q ss_pred eeEEEEcCCCcEEEeecCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~ 62 (106)
..+|+.||+|..+.++...
T Consensus 118 ~~~~~~DPdG~~iel~~~~ 136 (145)
T 2rk9_A 118 KQFMVQTPDGYLFRFCQDI 136 (145)
T ss_dssp EEEEEECTTCCEEEEEEC-
T ss_pred eEEEEECCCCCEEEEEEcC
Confidence 4688999999999998654
No 213
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=35.61 E-value=21 Score=23.37 Aligned_cols=20 Identities=25% Similarity=0.366 Sum_probs=16.8
Q ss_pred ceeEEEEcCCCcEEEeecCC
Q psy17586 43 TIIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~ 62 (106)
...+|+.||+|..+.++..+
T Consensus 114 ~~~~~~~DPdG~~iel~~~~ 133 (160)
T 3r4q_A 114 SYSVYIRDPAGNSVEVGEGK 133 (160)
T ss_dssp CEEEEEECTTCCEEEEEEGG
T ss_pred cEEEEEECCCCCEEEEEeCC
Confidence 46799999999999998644
No 214
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=35.27 E-value=31 Score=21.69 Aligned_cols=38 Identities=16% Similarity=0.262 Sum_probs=26.0
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.-.-.++++ ++|+.+..+.- .+++++.+.|..++
T Consensus 86 ~~~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 86 DWAIQAMPTFMFL-KEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred HcCCCccCEEEEE-ECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 3667766665555 89998877654 47777777766543
No 215
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=35.27 E-value=47 Score=20.75 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=16.6
Q ss_pred Eecce-eEEEEcCCCcEEEeecC-----CCCHHHH
Q psy17586 40 VDHTI-IMYLIDPEGLFVDYYGQ-----NKKPEEV 68 (106)
Q Consensus 40 VDHSa-~iYLmDPdGrfv~~f~~-----~~speei 68 (106)
++++. +++++|++|+++-.=+. +.+++++
T Consensus 5 le~~~d~i~v~d~~G~i~yvn~~~~~~lGy~~~el 39 (111)
T 2vlg_A 5 LQTKTDIHAVLASNGRIIYISANSKLHLGYLQGEM 39 (111)
T ss_dssp ----CCEEEEECTTSBEEEECTTHHHHHSCCHHHH
T ss_pred hhcCCCEEEEEcCCCeEEEEChHHHHHhCCCHHHH
Confidence 34433 78899999998755333 3455554
No 216
>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A
Probab=35.26 E-value=25 Score=21.58 Aligned_cols=17 Identities=6% Similarity=0.233 Sum_probs=14.2
Q ss_pred eeEEEEcCCCcEEEeec
Q psy17586 44 IIMYLIDPEGLFVDYYG 60 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~ 60 (106)
..+|+.||+|..+.++.
T Consensus 116 ~~~~~~dPdG~~iEl~e 132 (133)
T 3hdp_A 116 KVAFLFSTDIGLIELLE 132 (133)
T ss_dssp EEEEEEETTTEEEEEEE
T ss_pred eEEEEECCCceEEEEec
Confidence 46899999999988764
No 217
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=35.11 E-value=17 Score=22.96 Aligned_cols=23 Identities=13% Similarity=0.154 Sum_probs=19.1
Q ss_pred ceeEecceeEEEEc-CCCcEEEee
Q psy17586 37 WFQVDHTIIMYLID-PEGLFVDYY 59 (106)
Q Consensus 37 dY~VDHSa~iYLmD-PdGrfv~~f 59 (106)
.|-|...-.+||+| ++|+++...
T Consensus 103 ~~~v~~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 103 GFDVKSIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp HTTCCSSSEEEEEETTTCCEEESC
T ss_pred HcCCCCCCEEEEEECCCCcEEecc
Confidence 36677888999999 999988764
No 218
>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}
Probab=34.78 E-value=32 Score=21.42 Aligned_cols=19 Identities=16% Similarity=0.287 Sum_probs=16.4
Q ss_pred eeEEEEcCCCcEEEeecCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~ 62 (106)
..+|+.||+|..+.++...
T Consensus 110 ~~~~~~DPdG~~iel~~~~ 128 (141)
T 2qnt_A 110 RVFRFYDPDGHAIEVGESL 128 (141)
T ss_dssp EEEEEECTTCCEEEEEECC
T ss_pred EEEEEECCCCCEEEEEecc
Confidence 5789999999999998754
No 219
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=34.04 E-value=35 Score=23.48 Aligned_cols=19 Identities=5% Similarity=0.170 Sum_probs=15.1
Q ss_pred eeEEEEcCCCcEEEeecCCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~ 63 (106)
-.+|||| +|+++..+-...
T Consensus 139 r~tfvID-dG~I~~~~v~~~ 157 (173)
T 3mng_A 139 RFSMVVQ-DGIVKALNVEPD 157 (173)
T ss_dssp CEEEEEE-TTEEEEEEECTT
T ss_pred EEEEEEE-CCEEEEEEEeCC
Confidence 6789999 999988875543
No 220
>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}
Probab=33.91 E-value=32 Score=21.99 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=16.0
Q ss_pred eeEEEEcCCCcEEEeecCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~ 62 (106)
-.+|+.||+|..+.++...
T Consensus 109 ~~~~~~DPdG~~iel~~~~ 127 (150)
T 3bqx_A 109 LRGYVADPDGHIWEIAFNP 127 (150)
T ss_dssp EEEEEECTTCCEEEEEECT
T ss_pred EEEEEECCCCCEEEEEeCC
Confidence 5789999999999998653
No 221
>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}
Probab=33.26 E-value=30 Score=20.94 Aligned_cols=17 Identities=18% Similarity=0.202 Sum_probs=14.3
Q ss_pred eeEEEEcCCCcEEEeec
Q psy17586 44 IIMYLIDPEGLFVDYYG 60 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~ 60 (106)
..+|+.||+|..+.+..
T Consensus 116 ~~~~~~DP~G~~~el~e 132 (133)
T 4hc5_A 116 RATWFSDPDGNQFFLVE 132 (133)
T ss_dssp EEEEEECTTCEEEEEEE
T ss_pred EEEEEECCCCCEEEEEe
Confidence 67899999999888753
No 222
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=33.03 E-value=30 Score=21.73 Aligned_cols=20 Identities=20% Similarity=0.077 Sum_probs=16.1
Q ss_pred ceeEEEEcCCCcEEEeecCC
Q psy17586 43 TIIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~ 62 (106)
...+|+.||+|..+.++...
T Consensus 114 ~~~~~~~DPdG~~iel~~~~ 133 (141)
T 2rbb_A 114 WYQAVLLDPERNVFRINNVL 133 (141)
T ss_dssp EEEEEEECTTSCEEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEEcc
Confidence 35789999999999987543
No 223
>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}
Probab=32.97 E-value=26 Score=22.35 Aligned_cols=18 Identities=6% Similarity=0.266 Sum_probs=15.3
Q ss_pred eeEEEEcCCCcEEEeecC
Q psy17586 44 IIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~ 61 (106)
..+|+.||+|..+.++.+
T Consensus 127 ~~~~~~DPdG~~iel~~~ 144 (148)
T 3bt3_A 127 RECSITTTDGCILRFFES 144 (148)
T ss_dssp EEEEEECTTSCEEEEEEE
T ss_pred EEEEEECCCCCEEEEeee
Confidence 468999999999998754
No 224
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=32.68 E-value=54 Score=19.40 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=25.5
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|.....++++ ++|+.+..+.- ..++++.+.|.+++
T Consensus 69 ~~~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 69 TNNISATPTFQFF-RNKVRIDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHH
T ss_pred hcCCCcccEEEEE-ECCeEEEEEeC-CCHHHHHHHHHHhc
Confidence 4777777777777 79998876643 44555666665543
No 225
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=32.67 E-value=19 Score=22.59 Aligned_cols=23 Identities=17% Similarity=0.245 Sum_probs=19.3
Q ss_pred ceeEecceeEEEEc-CCCcEEEee
Q psy17586 37 WFQVDHTIIMYLID-PEGLFVDYY 59 (106)
Q Consensus 37 dY~VDHSa~iYLmD-PdGrfv~~f 59 (106)
.|-|...-.+||+| ++|+++...
T Consensus 103 ~~~v~~~Pt~~lid~~~G~i~~~~ 126 (144)
T 1o73_A 103 TFGVESIPTLITINADTGAIIGTQ 126 (144)
T ss_dssp HHTCCSSSEEEEEETTTCCEEESC
T ss_pred HcCCCCCCEEEEEECCCCeEEecc
Confidence 36677888999999 899998775
No 226
>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*
Probab=32.57 E-value=27 Score=23.09 Aligned_cols=18 Identities=22% Similarity=0.785 Sum_probs=15.6
Q ss_pred eEEEEcCCCcEEEeecCC
Q psy17586 45 IMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 45 ~iYLmDPdGrfv~~f~~~ 62 (106)
.+|+.||+|..+.++.+.
T Consensus 164 ~~~~~DPdG~~iel~~~~ 181 (187)
T 3vw9_A 164 LAFIQDPDGYWIEILNPN 181 (187)
T ss_dssp CEEEECTTCCEEEEECGG
T ss_pred EEEEECCCCCEEEEEEcc
Confidence 589999999999998753
No 227
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=32.43 E-value=81 Score=19.40 Aligned_cols=33 Identities=9% Similarity=0.042 Sum_probs=25.0
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCc
Q psy17586 55 FVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSW 87 (106)
Q Consensus 55 fv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~ 87 (106)
...++..+.+++++.+.|+.+++.+++...+..
T Consensus 101 ~~~~l~KP~~~~~l~~~i~~~l~~~~~~~~~~~ 133 (140)
T 3h5i_A 101 AYGYVMKSATEQVLITIVEMALRLYEANVHANE 133 (140)
T ss_dssp EEEEEETTCCHHHHHHHHHHHHHHHHHHHC---
T ss_pred CcEEEeCCCCHHHHHHHHHHHHHHHHhhcCCCC
Confidence 456778888999999999999988876655443
No 228
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=32.38 E-value=13 Score=22.69 Aligned_cols=38 Identities=18% Similarity=0.067 Sum_probs=27.6
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~ 75 (106)
.|-|...-.++++ ++|+.+..+.-..+++++.+.|..+
T Consensus 79 ~~~i~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 79 NFQVVSIPTLILF-KDGQPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp HTTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSC
T ss_pred hcCCCcCCEEEEE-ECCEEEEEecCCCCHHHHHHHHHHH
Confidence 4777777777776 5999988877777788777655543
No 229
>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}
Probab=32.27 E-value=29 Score=22.54 Aligned_cols=19 Identities=26% Similarity=0.485 Sum_probs=16.0
Q ss_pred eeEEEEcCCCcEEEeecCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~ 62 (106)
-.+|+.||+|..+.++.+.
T Consensus 127 ~~~~~~DPdG~~iel~~~~ 145 (148)
T 2r6u_A 127 FAAYFTDSEGNVVGLWETA 145 (148)
T ss_dssp EEEEEECTTSCEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEecC
Confidence 5789999999999988643
No 230
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=32.00 E-value=21 Score=22.70 Aligned_cols=23 Identities=22% Similarity=0.239 Sum_probs=19.1
Q ss_pred ceeEecceeEEEEc-CCCcEEEee
Q psy17586 37 WFQVDHTIIMYLID-PEGLFVDYY 59 (106)
Q Consensus 37 dY~VDHSa~iYLmD-PdGrfv~~f 59 (106)
.|-|...-.+||+| ++|+++...
T Consensus 103 ~~~v~~~Pt~~lid~~~G~i~~~~ 126 (146)
T 1o8x_A 103 HFNVESIPTLIGVDADSGDVVTTR 126 (146)
T ss_dssp HTTCCSSSEEEEEETTTCCEEESC
T ss_pred HhCCCCCCEEEEEECCCCeEEEec
Confidence 36677888999999 999988764
No 231
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=31.55 E-value=33 Score=22.20 Aligned_cols=18 Identities=17% Similarity=0.180 Sum_probs=14.8
Q ss_pred eeEEEEcCCCcEEEeecC
Q psy17586 44 IIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~ 61 (106)
...|+-||+|..+.++..
T Consensus 134 ~~~~f~DPdGn~iel~q~ 151 (155)
T 4g6x_A 134 VTAILDDTCGNLIQLMQI 151 (155)
T ss_dssp EEEEEECSSSCEEEEEEC
T ss_pred EEEEEECCCCCEEEEEEE
Confidence 356899999999998764
No 232
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=31.40 E-value=25 Score=24.84 Aligned_cols=50 Identities=14% Similarity=0.036 Sum_probs=37.3
Q ss_pred EecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcch
Q psy17586 40 VDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWFE 89 (106)
Q Consensus 40 VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~~ 89 (106)
+|-.+.+.++|-+..|+..-......+++++.+.++++.+++.+.+-++-
T Consensus 10 l~~~tALlvID~Q~~f~~~~~~~~~~~~~i~~i~~Li~~ar~~g~pVi~t 59 (199)
T 3txy_A 10 LNPTVALVAIDLQNGIVVLPMVPQSGGDVVAKTAELANAFRARKLPVIFV 59 (199)
T ss_dssp CCSSEEEEEECCBHHHHTSCCBSSCHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEEcCchhhhCCCcCCCCHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 44467899999999887532122467899999999999998888765553
No 233
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=30.37 E-value=37 Score=21.23 Aligned_cols=19 Identities=26% Similarity=0.429 Sum_probs=15.8
Q ss_pred eeEEEEcCCCcEEEeecCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~ 62 (106)
..+|+.||+|..+.++...
T Consensus 111 ~~~~~~DPdG~~iel~~~~ 129 (138)
T 2a4x_A 111 RYAIVKDPDGNVVDLFAPL 129 (138)
T ss_dssp EEEEEECTTCCEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCC
Confidence 4689999999999987654
No 234
>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2
Probab=29.60 E-value=28 Score=21.01 Aligned_cols=17 Identities=29% Similarity=0.686 Sum_probs=14.4
Q ss_pred eeEEEEcCCCcEEEeec
Q psy17586 44 IIMYLIDPEGLFVDYYG 60 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~ 60 (106)
..+|+.||+|..+.++.
T Consensus 100 ~~~~~~DPdG~~iel~~ 116 (118)
T 2i7r_A 100 ESLLVQGPAGLVLDFYR 116 (118)
T ss_dssp EEEEEECGGGCEEEEEE
T ss_pred EEEEEECCCccEEEEEe
Confidence 56799999999988864
No 235
>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*
Probab=29.58 E-value=32 Score=26.59 Aligned_cols=23 Identities=22% Similarity=0.634 Sum_probs=18.9
Q ss_pred ecceeEEEEcCCCcEEEeecCCC
Q psy17586 41 DHTIIMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 41 DHSa~iYLmDPdGrfv~~f~~~~ 63 (106)
++..++|+.||+|-.+.++..+.
T Consensus 251 ~~~~f~Y~~dP~G~~iE~~t~g~ 273 (365)
T 4ghg_A 251 SNAFYLYILDPDNHRIEIYTQDY 273 (365)
T ss_dssp TCCEEEEEECTTCCEEEEEECCC
T ss_pred CCcEEEEEECCCCceEEEEcCCc
Confidence 44567999999999999987654
No 236
>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6
Probab=29.22 E-value=21 Score=22.35 Aligned_cols=18 Identities=17% Similarity=0.425 Sum_probs=15.3
Q ss_pred eeEEEEcCCCcEEEeecC
Q psy17586 44 IIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~ 61 (106)
..+|+.||+|..+.++.+
T Consensus 132 ~~~~~~DPdG~~iel~~~ 149 (153)
T 1ss4_A 132 RLCYIRGVEGILIGLAEE 149 (153)
T ss_dssp EEEEEECGGGCEEEEEEE
T ss_pred EEEEEECCCCCEEEEEec
Confidence 567999999999998764
No 237
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=28.77 E-value=58 Score=22.83 Aligned_cols=29 Identities=7% Similarity=0.173 Sum_probs=20.1
Q ss_pred eeEEEEcCCCcEEEeecCC---------CCHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQN---------KKPEEVSNSII 73 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~---------~speeiAe~Ir 73 (106)
-.+||+ ++|+++..+... .+++++.+.|.
T Consensus 126 p~t~li-~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~ 163 (241)
T 1nm3_A 126 RYSMLV-KNGVVEKMFIEPNEPGDPFKVSDADTMLKYLA 163 (241)
T ss_dssp CEEEEE-ETTEEEEEEECCSCSSCCCSSSSHHHHHHHHC
T ss_pred eEEEEE-ECCEEEEEEEeccCCCccceecCHHHHHHHhh
Confidence 378999 999999877543 34566655554
No 238
>3v67_A Sensor protein CPXA; PAS fold, signal sensing, signaling protein, merohedral twin; 2.30A {Vibrio parahaemolyticus}
Probab=28.11 E-value=45 Score=23.06 Aligned_cols=44 Identities=11% Similarity=0.080 Sum_probs=28.5
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH--hhhcCCcchh
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE--NLKKKSWFED 90 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~--~~~~~~~~~~ 90 (106)
..+||+|.+|+++..-. . .+--...|+..|.... ..+|.+.|++
T Consensus 56 ~r~~l~d~eG~Il~~~~--~-~~~~~ralrnFi~~sd~~~~P~qk~ygr 101 (138)
T 3v67_A 56 PRVFFSDYNGNVLTTDK--R-SNFQLRAMQNFVTSIEDYNKPKQRLYGR 101 (138)
T ss_dssp CEEEEECTTSCEECCCC--S-CHHHHHHHHHHHHHCSCTTSCEEEEETT
T ss_pred ccEEEEcCCCCEecCCc--c-cchhHHHHHHHHHhccCccCchhhhhCc
Confidence 46999999999887432 2 2333466777875543 4566666654
No 239
>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8
Probab=27.99 E-value=42 Score=20.99 Aligned_cols=16 Identities=19% Similarity=0.484 Sum_probs=13.9
Q ss_pred EEEEcCCCcEEEeecC
Q psy17586 46 MYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 46 iYLmDPdGrfv~~f~~ 61 (106)
.|+.||+|..+.++..
T Consensus 118 ~~~~DPdG~~iel~~~ 133 (139)
T 1twu_A 118 VTIEDPDGWRIVFMNS 133 (139)
T ss_dssp EEEECTTCCEEEEESS
T ss_pred eEEECCCCCEEEEEEc
Confidence 3899999999999865
No 240
>2kzb_A Autophagy-related protein 19; selective autophagy, ATG19, alpha-mannosidase, protein trans; NMR {Saccharomyces cerevisiae}
Probab=27.86 E-value=85 Score=21.50 Aligned_cols=52 Identities=15% Similarity=0.229 Sum_probs=31.8
Q ss_pred ceeeeeec-CCcccccee-------------eEEEEEecccccCCCCceeEecceeEEEEcCCCcEEEeecCCCC
Q psy17586 4 SCTLHFIG-GTLPLCRPL-------------MYSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDYYGQNKK 64 (106)
Q Consensus 4 ~~~~~~~~-g~~~~~~~~-------------~y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~f~~~~s 64 (106)
.|||.|-- ||.|.+.+. .|++|-.. .+...+|+|. +.|.+|+.+-+=.++.+
T Consensus 39 nCtl~fs~~g~~ptv~si~mGPHEigik~~ke~~~fp~~---~~~~~~~t~~------i~nq~ge~i~~gk~~~s 104 (118)
T 2kzb_A 39 NCKLKFTDAGDKPTTQIIDMGPHEIGIKEYKEYRYFPYA---LDLEAGSTIE------IENQYGEVIFLGKYGSS 104 (118)
T ss_dssp SCEECCCSSSSSCCCCCEECCSCCCCTTCCEEEEECSCC---CCCCTTCCEE------EECTTSSEEEEECCCSS
T ss_pred ccEEEEecCCCCceEEEEecCccccccCcceEEEEcccc---CCcccCCeEE------EEecCCcEEEEEeccCC
Confidence 59999864 899988873 24443332 2234567654 77888876655444443
No 241
>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}
Probab=27.66 E-value=31 Score=22.24 Aligned_cols=18 Identities=17% Similarity=0.266 Sum_probs=15.1
Q ss_pred ceeEEEEcCCCcEEEeec
Q psy17586 43 TIIMYLIDPEGLFVDYYG 60 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~ 60 (106)
...+|+.||+|..+.++.
T Consensus 124 g~~~~~~DPdG~~iel~~ 141 (144)
T 2kjz_A 124 GYTFTAADPDSHRLRVYA 141 (144)
T ss_dssp EEEEEECCTTCCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEe
Confidence 356899999999998875
No 242
>2w3g_A DOSS, two component sensor histidine kinase DEVS (GAF family protein); redox sensor, heme, hypoxia, GAF domain, transferase; HET: HEM; 1.40A {Mycobacterium tuberculosis} PDB: 2w3d_A* 2w3f_A* 2w3e_A* 2w3h_A* 2y79_A* 2y8h_A* 2vzw_A*
Probab=27.53 E-value=77 Score=19.14 Aligned_cols=26 Identities=15% Similarity=0.068 Sum_probs=19.4
Q ss_pred ceeEEEEcCCCcEEEeecCCCCHHHH
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNKKPEEV 68 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~speei 68 (106)
.+.+||+|++|.+......+.+++..
T Consensus 26 ~~~i~l~d~~~~l~~~~~~g~~~~~~ 51 (153)
T 2w3g_A 26 YGAMEVHDRQHRVLHFVYEGIDEETV 51 (153)
T ss_dssp EEEEEEECTTCCEEEEEEESCCHHHH
T ss_pred EEEEEEECCCCCEEEEEEecCCHHHH
Confidence 36789999888888777777666543
No 243
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=27.09 E-value=57 Score=23.01 Aligned_cols=46 Identities=9% Similarity=-0.015 Sum_probs=34.1
Q ss_pred ceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcc
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWF 88 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~ 88 (106)
.+.+.++|-+..|..---.....+++++.+.++++.+++.+.+-++
T Consensus 23 ~tALlvID~Q~~f~~g~l~~~~~~~~i~~i~~l~~~ar~~g~pVi~ 68 (197)
T 4h17_A 23 HASLIIIDAQKEYLSGPLKLSGMDEAVANIARLLDAARKSGRPIIH 68 (197)
T ss_dssp GEEEEEECCBGGGGSSTTCCTTHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEEEcccchhhCCccCCcCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 4678999999888751002235788999999999999887776544
No 244
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=26.82 E-value=45 Score=23.00 Aligned_cols=23 Identities=9% Similarity=0.099 Sum_probs=18.5
Q ss_pred EecceeEEEEcCCCcEEEeecCC
Q psy17586 40 VDHTIIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 40 VDHSa~iYLmDPdGrfv~~f~~~ 62 (106)
+..+..+||+|.+|.++...+..
T Consensus 163 ~~~~g~~~l~d~~G~ii~~~p~~ 185 (254)
T 3lif_A 163 LGPGGSISLLHSDGRLLIQWPSL 185 (254)
T ss_dssp CCTTCEEEEEETTSBEEEEETTC
T ss_pred cCCCcEEEEEeCCCcEEEECCCC
Confidence 45677899999999999986543
No 245
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=26.75 E-value=37 Score=23.61 Aligned_cols=32 Identities=22% Similarity=0.390 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHH--HhhhcCCcchhhhhhhc
Q psy17586 65 PEEVSNSIIVNMMKY--ENLKKKSWFEDTIESLT 96 (106)
Q Consensus 65 peeiAe~Ir~~l~~~--~~~~~~~~~~~~~~~~~ 96 (106)
..+..+.|-.+.-+| +.++.+.|++++.|.|+
T Consensus 3 ~~~~le~id~L~leFAKrAa~fNnW~e~A~EdL~ 36 (129)
T 1wlx_A 3 TEKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQ 36 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHhc
Confidence 355677888887777 47899999999999987
No 246
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=26.68 E-value=39 Score=21.82 Aligned_cols=16 Identities=13% Similarity=0.023 Sum_probs=12.9
Q ss_pred ceeEEEEcCCCcEEEe
Q psy17586 43 TIIMYLIDPEGLFVDY 58 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~ 58 (106)
..++|++|++|..+..
T Consensus 50 ~~~i~v~d~~G~~~a~ 65 (131)
T 1p0z_A 50 ATYITVGDASGQRLYH 65 (131)
T ss_dssp CSEEEEEETTSBEEEC
T ss_pred CCEEEEEcCCCcEEEe
Confidence 4589999999987654
No 247
>3c8c_A Methyl-accepting chemotaxis protein; structural genomics, unknown function, uncharacterized protein; 1.50A {Vibrio cholerae o1 biovar eltor str}
Probab=26.47 E-value=40 Score=22.41 Aligned_cols=17 Identities=6% Similarity=0.292 Sum_probs=14.3
Q ss_pred cceeEEEEcCCCcEEEe
Q psy17586 42 HTIIMYLIDPEGLFVDY 58 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~ 58 (106)
-+..+||+|++|+++..
T Consensus 158 ~~g~~~l~d~~G~ii~~ 174 (240)
T 3c8c_A 158 DAGYVFIVSEDGTTIAH 174 (240)
T ss_dssp TSEEEEEEETTSBEEEC
T ss_pred CceEEEEEcCCCcEEEe
Confidence 45789999999998875
No 248
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=26.39 E-value=46 Score=19.83 Aligned_cols=14 Identities=29% Similarity=0.766 Sum_probs=11.5
Q ss_pred eEEEEcCCCcEEEe
Q psy17586 45 IMYLIDPEGLFVDY 58 (106)
Q Consensus 45 ~iYLmDPdGrfv~~ 58 (106)
.|+++|++|+++..
T Consensus 23 ~i~~~d~~g~i~~v 36 (117)
T 2r78_A 23 GIFIMDAEGHYLDV 36 (117)
T ss_dssp EEEEECTTSBEEEE
T ss_pred eEEEECCCCCEEEe
Confidence 68899999998754
No 249
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=26.21 E-value=39 Score=20.45 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=24.9
Q ss_pred eEecceeEEEEcCCCcE-EEeecCCCCHHHHHHHHHHH
Q psy17586 39 QVDHTIIMYLIDPEGLF-VDYYGQNKKPEEVSNSIIVN 75 (106)
Q Consensus 39 ~VDHSa~iYLmDPdGrf-v~~f~~~~speeiAe~Ir~~ 75 (106)
-|...-.++++++.|+. +..+.-..+.+++.+.|.++
T Consensus 78 ~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 78 EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAEN 115 (121)
T ss_dssp CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHT
T ss_pred ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhc
Confidence 56677789999998883 33444455677777666554
No 250
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=26.02 E-value=1e+02 Score=20.66 Aligned_cols=37 Identities=14% Similarity=0.033 Sum_probs=25.5
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIV 74 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~ 74 (106)
+...|.-+.- +.|++|++++++....+.+.+.+.+..
T Consensus 122 g~~~i~ia~p--i~~~~g~~~Gvl~~~i~l~~l~~~~~~ 158 (217)
T 4dah_A 122 GQPIFTICVP--VLDSKRNVTDYLVAAIQIDYLKNLINL 158 (217)
T ss_dssp CSEEEEEEEE--EECTTSCEEEEEEEEEEHHHHHHHHHH
T ss_pred CCEEEEEEEE--EECCCCCEEEEEEEEEcHHHHHHHHHh
Confidence 3444443333 458899999999988888887775544
No 251
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=25.99 E-value=96 Score=18.98 Aligned_cols=29 Identities=3% Similarity=0.011 Sum_probs=23.1
Q ss_pred EEEeecCCC-CHHHHHHHHHHHHHHHHhhh
Q psy17586 55 FVDYYGQNK-KPEEVSNSIIVNMMKYENLK 83 (106)
Q Consensus 55 fv~~f~~~~-speeiAe~Ir~~l~~~~~~~ 83 (106)
...++..+. +++++.+.|+.+++.|....
T Consensus 104 a~~~l~Kp~~~~~~l~~~i~~~l~~~~~~~ 133 (144)
T 3kht_A 104 ASSVVDKSSNNVTDFYGRIYAIFSYWLTVN 133 (144)
T ss_dssp CSEEEECCTTSHHHHHHHHHHHHHHHHHTS
T ss_pred CCEEEECCCCcHHHHHHHHHHHHHHHHhcc
Confidence 456777778 99999999999998886443
No 252
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=25.89 E-value=30 Score=24.40 Aligned_cols=46 Identities=9% Similarity=-0.019 Sum_probs=33.4
Q ss_pred ceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcc
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWF 88 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~ 88 (106)
.+.+.++|-+..|..-.......+++.+.+.++++.+++.+.+-++
T Consensus 12 ~~ALlvID~Q~~f~~~~~~~~~~~~~i~~i~~l~~~ar~~g~pVi~ 57 (198)
T 3mcw_A 12 KPLLLLIDMQQAVDDPSWGPRNHPQAEQACAGLLQAWRARGLPLIH 57 (198)
T ss_dssp CCEEEEECCBGGGGSGGGCCBSCTTHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCEEEEEeCchhhcCCCccccChHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4678999999998642211234567899999999998887766544
No 253
>3t12_B Gliding protein MGLB; G-domain containing protein, bacterial polarity, motility, homodimeric GAP protein, POLE localisation; HET: GDP; 2.20A {Thermus thermophilus} PDB: 3t1q_B*
Probab=25.85 E-value=1.3e+02 Score=20.51 Aligned_cols=36 Identities=14% Similarity=0.141 Sum_probs=25.3
Q ss_pred eeEEEEcCCCcEEEeecC-----CCCHHHHHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQ-----NKKPEEVSNSIIVNMMKY 79 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~-----~~speeiAe~Ir~~l~~~ 79 (106)
-.++|+|.+|..+..-.. +.+.+.++.-....+..-
T Consensus 27 ~~~~lvd~dG~vIa~~~~~~~~~~~d~~~lAAl~A~~~~a~ 67 (136)
T 3t12_B 27 RYALLIDRKGFVLAHKEALWAPKPPPLDTLATLVASNAAAT 67 (136)
T ss_dssp SEEEEEETTC-CCEEEECTTSCCCSCHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCEEEEeccccCCCCCcHHHHHHHHHHHHHHH
Confidence 357899999999998743 556677777766666444
No 254
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=25.75 E-value=90 Score=24.47 Aligned_cols=34 Identities=12% Similarity=0.052 Sum_probs=28.1
Q ss_pred eeEEEEcCCCcEEEeecCCC-CHHHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNK-KPEEVSNSIIVNMM 77 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~-speeiAe~Ir~~l~ 77 (106)
..+.+||.+|+|+--+-.+. .+.+++..|..+|.
T Consensus 82 PaVvvvDe~G~~vIpLLsGH~GAN~LA~~IA~~lg 116 (336)
T 3eeq_A 82 PAIVCIDDKINYVIPLLGGHWGANDIARELSVILN 116 (336)
T ss_dssp CEEEEECTTCCEEEEEECTTTTHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCCEEEEeccCchhHHHHHHHHHHHhC
Confidence 57899999999998775444 78999999998764
No 255
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=25.74 E-value=61 Score=19.91 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=28.8
Q ss_pred CceeEecceeEEEEcCCCcEE--EeecCCCCHHHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFV--DYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv--~~f~~~~speeiAe~Ir~~l 76 (106)
..|-|...-.++++++.|+.. .+.....+++++.+.|..++
T Consensus 75 ~~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 75 DQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHA 117 (133)
T ss_dssp SSCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHS
T ss_pred hhcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhc
Confidence 358899999999998877543 33323367788877776665
No 256
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=25.69 E-value=53 Score=17.16 Aligned_cols=14 Identities=7% Similarity=0.301 Sum_probs=10.6
Q ss_pred eeEEEEcCCCcEEE
Q psy17586 44 IIMYLIDPEGLFVD 57 (106)
Q Consensus 44 a~iYLmDPdGrfv~ 57 (106)
..++++|++|+++.
T Consensus 3 ~~i~~~d~~g~i~~ 16 (96)
T 3a0s_A 3 TAIITLSKDGRITE 16 (96)
T ss_dssp CEEEEEETTSBEEE
T ss_pred ceEEEEcCCCCEee
Confidence 35788899998764
No 257
>3hcy_A Putative two-component sensor histidine kinase PR; two-component sensor histidine kinase protein, structural GE PSI, MCSG; 2.80A {Sinorhizobium meliloti}
Probab=25.53 E-value=70 Score=19.76 Aligned_cols=24 Identities=13% Similarity=0.090 Sum_probs=17.9
Q ss_pred ceeEEEEcCCCcEEEeecCCCCHH
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNKKPE 66 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~spe 66 (106)
.+.+||+|++|++......+.+++
T Consensus 23 ~~~i~l~d~~~~l~~~a~~g~~~~ 46 (151)
T 3hcy_A 23 RASILLFDEAGTMRFVAARGLSEH 46 (151)
T ss_dssp EEEEEEECTTSCEEEEEEESCCHH
T ss_pred EEEEEEEcCCCcEEEEeeCCCCHH
Confidence 467899999997777666666554
No 258
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=25.46 E-value=66 Score=19.52 Aligned_cols=35 Identities=9% Similarity=0.086 Sum_probs=25.8
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSI 72 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~I 72 (106)
.|-|.-...++++ .+|+.+..+.-..+++++.+.|
T Consensus 82 ~~~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l 116 (118)
T 1zma_A 82 RYGIPTVPGFVHI-TDGQINVRCDSSMSAQEIKDFA 116 (118)
T ss_dssp HHTCCSSCEEEEE-ETTEEEEECCTTCCHHHHHHHH
T ss_pred HcCCCCCCeEEEE-ECCEEEEEecCCCCHHHHHHHh
Confidence 3667777778877 4899988877667777766644
No 259
>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*
Probab=25.27 E-value=44 Score=24.15 Aligned_cols=21 Identities=19% Similarity=0.275 Sum_probs=17.2
Q ss_pred ceeEEEEcCCCcEEEeecCCC
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~ 63 (106)
..++|+.||+|..+.++..+.
T Consensus 253 ~~~~y~~DPdG~~iE~~~~g~ 273 (309)
T 3hpy_A 253 GCTIYAWDPSGNRFETFMGGY 273 (309)
T ss_dssp EEEEEEECTTSCEEEEEEECC
T ss_pred cEEEEEECCCCCEEEEEeCCc
Confidence 457899999999999886544
No 260
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=25.21 E-value=21 Score=25.43 Aligned_cols=44 Identities=11% Similarity=-0.078 Sum_probs=31.6
Q ss_pred eeEEEEcCCCcEEE---eecCCCCHHHHHHHHHHHHHHHH---hhhcCCcc
Q psy17586 44 IIMYLIDPEGLFVD---YYGQNKKPEEVSNSIIVNMMKYE---NLKKKSWF 88 (106)
Q Consensus 44 a~iYLmDPdGrfv~---~f~~~~speeiAe~Ir~~l~~~~---~~~~~~~~ 88 (106)
+.+.++|-+..|.. .+. ....+++++.+.++++.++ +.+.+-++
T Consensus 8 tALlvID~Q~~f~~~~g~l~-~~~~~~ii~~i~~Ll~~ar~~~~~g~pVi~ 57 (204)
T 3hb7_A 8 HAILVIDMLNDFVGEKAPLR-CPGGETIIPDLQKIFEWVRGREGDDIHLVH 57 (204)
T ss_dssp EEEEEECCBTTTSSTTCTTC-CGGGGGGHHHHHHHHHHHHHSSSSSEEEEE
T ss_pred eEEEEEcCchhhcCCCCccc-CccHHHHHHHHHHHHHHHHhhhhcCCEEEE
Confidence 57899999998875 111 1245788999999999888 76665443
No 261
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=25.16 E-value=69 Score=22.72 Aligned_cols=45 Identities=9% Similarity=0.166 Sum_probs=34.2
Q ss_pred ceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcc
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWF 88 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~ 88 (106)
.+.+.++|-+..|+...+ ....+++.+.+.++++.+++.+.+-++
T Consensus 12 ~tALlvID~Q~~f~~~~~-~~~~~~~i~~i~~l~~~ar~~g~pVi~ 56 (208)
T 1yac_A 12 DAAVLLVDHQAGLLSLVR-DIEPDKFKNNVLALGDLAKYFNLPTIL 56 (208)
T ss_dssp SEEEEEECCBTTGGGGCC-SSCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEEEcCchhhhcccc-cccHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 468889999999876432 234678999999999988877765444
No 262
>2yh5_A DAPX protein, BAMC; lipid binding protein, lipoprotein, BAM complex; 1.25A {Escherichia coli} PDB: 3sns_A
Probab=24.96 E-value=1e+02 Score=20.76 Aligned_cols=32 Identities=16% Similarity=0.258 Sum_probs=21.0
Q ss_pred ceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHH
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMK 78 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~ 78 (106)
.+.|.++|++|+...- ..++.|...|...|++
T Consensus 88 ~t~V~v~d~~G~p~~~----~~a~~ll~~L~~~l~~ 119 (127)
T 2yh5_A 88 RSSLQFIDPKGHTLTQ----SQNDALVAVFQAAFSK 119 (127)
T ss_dssp EEEEEEECTTSCBCCH----HHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCCCH----HHHHHHHHHHHHHHHH
Confidence 4789999999985321 2355666666666644
No 263
>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1
Probab=24.88 E-value=48 Score=20.84 Aligned_cols=16 Identities=25% Similarity=1.003 Sum_probs=13.9
Q ss_pred eE-EEEcCCCcEEEeec
Q psy17586 45 IM-YLIDPEGLFVDYYG 60 (106)
Q Consensus 45 ~i-YLmDPdGrfv~~f~ 60 (106)
.+ |+.||+|..+.++.
T Consensus 110 ~~~~~~DPdG~~iel~~ 126 (144)
T 2c21_A 110 FMAFVVDPDGYYIELLN 126 (144)
T ss_dssp SEEEEECTTSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEE
Confidence 44 99999999999986
No 264
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=24.77 E-value=66 Score=22.32 Aligned_cols=46 Identities=15% Similarity=0.113 Sum_probs=33.4
Q ss_pred ceeEEEEcCCCcEEEeec----CCCCHHHHHHHHHHHHHHHHhhhcCCcc
Q psy17586 43 TIIMYLIDPEGLFVDYYG----QNKKPEEVSNSIIVNMMKYENLKKKSWF 88 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~----~~~speeiAe~Ir~~l~~~~~~~~~~~~ 88 (106)
.+.+.++|-+..|...++ .....+++++.+.++++.+++.+.+-++
T Consensus 7 ~~aLlvID~Q~~f~~~~~~g~l~~~~~~~~i~~i~~l~~~ar~~g~pVi~ 56 (190)
T 3lqy_A 7 TTALLLIDFQNDYFSTYNGAKNPLVGTEAAAEQGAKLLAKFRQQGLPVVH 56 (190)
T ss_dssp CEEEEEECCBGGGCTTSTTCSSCCBTHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEEEcCchhhhCcCCCCccCcCCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 467889999888864221 1235788999999999998887766544
No 265
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=24.41 E-value=42 Score=24.44 Aligned_cols=51 Identities=10% Similarity=0.156 Sum_probs=38.2
Q ss_pred ceeEec-ceeEEEEcCCCcEEEeecCCCC-HHHHHHHHHHHHHHHHhhhcCCc
Q psy17586 37 WFQVDH-TIIMYLIDPEGLFVDYYGQNKK-PEEVSNSIIVNMMKYENLKKKSW 87 (106)
Q Consensus 37 dY~VDH-Sa~iYLmDPdGrfv~~f~~~~s-peeiAe~Ir~~l~~~~~~~~~~~ 87 (106)
+..+|= .+.+.++|-+..|+..++.... .+++++.|.++++.+++.+.+-.
T Consensus 21 ~w~ldp~rtALlVIDmQ~~F~~~~~~~~~~~~~vv~~i~~Li~~ar~~g~pVi 73 (223)
T 3tg2_A 21 DWRIDASRAVLLIHNMQEYFVHYFDSQAEPIPSLIKHIQQLKAHAKQAGIPVV 73 (223)
T ss_dssp CCCCCTTTEEEEEECCBHHHHTTBCTTSTTHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCcCCCCCeEEEEEcCchhhhCccccccccHHHHHHHHHHHHHHHHHcCCeEE
Confidence 345554 4789999999888766555543 47899999999999988887643
No 266
>2ky6_A Mediator of RNA polymerase II transcription subun; ARC, VP16 binding domain, acid, transcription REGU; NMR {Homo sapiens} PDB: 2l23_A 2l6u_A 2xnf_A
Probab=24.39 E-value=1.8e+02 Score=21.16 Aligned_cols=42 Identities=12% Similarity=0.248 Sum_probs=31.5
Q ss_pred eeEEEEcC-CCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCc
Q psy17586 44 IIMYLIDP-EGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSW 87 (106)
Q Consensus 44 a~iYLmDP-dGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~ 87 (106)
..+.|.+| .--|.+++|. +.+..+.+||+.|+.+++.-+.++
T Consensus 123 vLiLlYs~~k~aflGfIPn--DQ~~Fv~rlr~Viq~~k~~q~~k~ 165 (166)
T 2ky6_A 123 VLMLLYSSKKKIFMGLIPY--DQSGFVNGIRQVITNHKQVQQQKL 165 (166)
T ss_dssp EEEEEECTTTCSEEEEEES--SHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred EEEEEEcCCcceeeeeccC--CHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34567778 5578899884 467889999999998886655543
No 267
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=24.29 E-value=86 Score=19.42 Aligned_cols=29 Identities=14% Similarity=0.167 Sum_probs=20.6
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
..+.++|.+|++++++. ..++...+....
T Consensus 117 ~~l~Vvd~~g~~~Giit----~~dil~~~~~~~ 145 (152)
T 4gqw_A 117 RRLPVVDSDGKLVGIIT----RGNVVRAALQIK 145 (152)
T ss_dssp CEEEEECTTSBEEEEEE----HHHHHHHHHC--
T ss_pred CEEEEECCCCcEEEEEE----HHHHHHHHHhcc
Confidence 46889999999999976 566666555443
No 268
>1je5_A Helix-destabilizing protein; OB-fold, beta barrel, DNA binding protein; 1.90A {Enterobacteria phage T7} SCOP: b.40.4.7
Probab=24.03 E-value=39 Score=25.26 Aligned_cols=41 Identities=10% Similarity=0.126 Sum_probs=25.2
Q ss_pred cCCCcEEEeecCCCC---HHHHHHHHHHHHHHHHhhhcCCcchh
Q psy17586 50 DPEGLFVDYYGQNKK---PEEVSNSIIVNMMKYENLKKKSWFED 90 (106)
Q Consensus 50 DPdGrfv~~f~~~~s---peeiAe~Ir~~l~~~~~~~~~~~~~~ 90 (106)
+|+|+|-..+--+.+ +.++++.|.+.+.+..++++..|-++
T Consensus 33 ~~~gkYsv~liipk~d~~~~~~i~~I~~a~e~a~~e~~~k~~~~ 76 (206)
T 1je5_A 33 NPRGVYKVDLTIPNKDPRCQRMVDEIVKCHEEAYAAAVEEYEAN 76 (206)
T ss_dssp CCSCEEEEEEEEETTSHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCcEEEEEEEcCcchhHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 355555554433333 36788888888877766666555543
No 269
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=23.87 E-value=50 Score=19.12 Aligned_cols=19 Identities=11% Similarity=0.030 Sum_probs=14.9
Q ss_pred EecceeEEEEcCCCcEEEe
Q psy17586 40 VDHTIIMYLIDPEGLFVDY 58 (106)
Q Consensus 40 VDHSa~iYLmDPdGrfv~~ 58 (106)
++-+.+++++|++|+++..
T Consensus 6 l~~~~~i~~~d~~g~i~~~ 24 (117)
T 3f1p_A 6 LDSKTFLSEHSMDMKFTYC 24 (117)
T ss_dssp TGGGEEEEEECTTCBEEEE
T ss_pred cCCccEEEEECCCceEEEE
Confidence 4556788999999998754
No 270
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=23.87 E-value=41 Score=23.76 Aligned_cols=46 Identities=15% Similarity=-0.055 Sum_probs=33.3
Q ss_pred ceeEEEEcCCCcEEEee--cCCCCHHHHHHHHHHHHHHHHhhhcCCcc
Q psy17586 43 TIIMYLIDPEGLFVDYY--GQNKKPEEVSNSIIVNMMKYENLKKKSWF 88 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f--~~~~speeiAe~Ir~~l~~~~~~~~~~~~ 88 (106)
.+.+.++|-+..|..-- ......+++++.+.++++.+++.+.+-++
T Consensus 8 ~tALlvID~Q~~f~~~~g~l~~~~~~~iv~~i~~L~~~ar~~g~pVi~ 55 (204)
T 3hu5_A 8 TVALAIIDMQNDFVLPGAPACVEGAMGTVPVIAGLLAKARAEGWMVLH 55 (204)
T ss_dssp CEEEEEECCBHHHHSTTSTTCCTTHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CeEEEEECCchhhhCCCCcccccCHHHHHHHHHHHHHHHHHCCCeEEE
Confidence 35788899888876310 11235688999999999999888876655
No 271
>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3
Probab=23.73 E-value=58 Score=23.32 Aligned_cols=20 Identities=20% Similarity=0.433 Sum_probs=16.6
Q ss_pred eeEEEEcCCCcEEEeecCCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~ 63 (106)
..+|+.||+|..+.++....
T Consensus 252 ~~~~~~DPdG~~iel~~~~~ 271 (307)
T 1mpy_A 252 KTIYFFDPSGNRNEVFCGGD 271 (307)
T ss_dssp EEEEEECTTSCEEEEEECCC
T ss_pred eEEEEECCCCcEEEEEeccc
Confidence 36899999999999987643
No 272
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=23.61 E-value=58 Score=18.34 Aligned_cols=14 Identities=7% Similarity=0.093 Sum_probs=11.4
Q ss_pred eEEEEcCCCcEEEe
Q psy17586 45 IMYLIDPEGLFVDY 58 (106)
Q Consensus 45 ~iYLmDPdGrfv~~ 58 (106)
.++++|++|+++..
T Consensus 25 ~i~~~d~~g~i~~~ 38 (118)
T 3olo_A 25 ASFCLGDNWQFLYV 38 (118)
T ss_dssp EEEEECTTSBEEEE
T ss_pred eEEEECCCCcEEEE
Confidence 57889999998754
No 273
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=23.44 E-value=25 Score=24.37 Aligned_cols=46 Identities=4% Similarity=-0.036 Sum_probs=31.4
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcch
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWFE 89 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~~ 89 (106)
+.+.++|-+..|..--......+++++.+.++++.+++.+.+-++-
T Consensus 3 ~ALlvID~Q~~f~~g~~~~~~~~~~i~~i~~l~~~ar~~g~pVi~t 48 (182)
T 3eef_A 3 PALVVVDMVNEFIHGRLATPEAMKTVGPARKVIETFRRSGLPVVYV 48 (182)
T ss_dssp EEEEEECCBHHHHTSTTCCHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEEcCCCcCCCCccCCccHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 5678899988874210011235789999999999988877665443
No 274
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=23.29 E-value=61 Score=22.15 Aligned_cols=44 Identities=7% Similarity=-0.006 Sum_probs=30.4
Q ss_pred eeEEEEcCCCcEEEe-ecCCCCHHHHHHHHHHHHHHHHhhhcCCc
Q psy17586 44 IIMYLIDPEGLFVDY-YGQNKKPEEVSNSIIVNMMKYENLKKKSW 87 (106)
Q Consensus 44 a~iYLmDPdGrfv~~-f~~~~speeiAe~Ir~~l~~~~~~~~~~~ 87 (106)
+.+.++|-+..|..- --.....+++++.+.++++.+++.+.+-.
T Consensus 4 ~aLlvID~Q~~f~~~g~l~~~~~~~~v~~i~~l~~~ar~~g~pVi 48 (180)
T 1im5_A 4 EALIVVDMQRDFMPGGALPVPEGDKIIPKVNEYIRKFKEKGALIV 48 (180)
T ss_dssp EEEEEECCBGGGSTTSSSCCTTGGGGHHHHHHHHHHHHHTTCEEE
T ss_pred cEEEEEcCCCccCCCCcccCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 568889999887611 00123457899999999998887666543
No 275
>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*
Probab=23.15 E-value=57 Score=23.24 Aligned_cols=19 Identities=26% Similarity=0.447 Sum_probs=16.2
Q ss_pred eEEEEcCCCcEEEeecCCC
Q psy17586 45 IMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 45 ~iYLmDPdGrfv~~f~~~~ 63 (106)
++|+.||+|..+.++....
T Consensus 247 ~~~~~DPdG~~iel~~~~~ 265 (297)
T 1lgt_A 247 SFYASTPSGVEVEYGWSAR 265 (297)
T ss_dssp EEEEECTTSCEEEEEECCC
T ss_pred EEEEECCCCcEEEEecCCE
Confidence 4899999999999987653
No 276
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=23.11 E-value=70 Score=22.13 Aligned_cols=18 Identities=11% Similarity=0.206 Sum_probs=13.9
Q ss_pred eeEEEEcCCCcEEEeecCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~ 62 (106)
-.+|||| +|+.+..+-..
T Consensus 150 r~tfiId-dG~I~~~~~~~ 167 (184)
T 3uma_A 150 RYSMLVE-DGVVKALNIEE 167 (184)
T ss_dssp CEEEEEE-TTEEEEEEECS
T ss_pred eEEEEEC-CCEEEEEEEeC
Confidence 4588996 99998888543
No 277
>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}
Probab=23.11 E-value=52 Score=24.53 Aligned_cols=18 Identities=22% Similarity=0.770 Sum_probs=15.4
Q ss_pred eeEEEEcCCCcEEEeecC
Q psy17586 44 IIMYLIDPEGLFVDYYGQ 61 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~ 61 (106)
.++|+.||+|..+.++..
T Consensus 256 ~~~y~~DPdG~~iEl~~~ 273 (339)
T 3lm4_A 256 QFLYVFEPGGNRIELFGE 273 (339)
T ss_dssp EEEEEECTTSCEEEEECC
T ss_pred eEEEEEcCCCCEEEEEEc
Confidence 559999999999998843
No 278
>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}
Probab=22.67 E-value=20 Score=27.28 Aligned_cols=52 Identities=12% Similarity=0.172 Sum_probs=34.0
Q ss_pred Eecc--eeEEEEcCCCcEEEeecC--CCCHHHHHHHHHHHHHHHHhhhcCCcchhhhhhhcc
Q psy17586 40 VDHT--IIMYLIDPEGLFVDYYGQ--NKKPEEVSNSIIVNMMKYENLKKKSWFEDTIESLTS 97 (106)
Q Consensus 40 VDHS--a~iYLmDPdGrfv~~f~~--~~speeiAe~Ir~~l~~~~~~~~~~~~~~~~~~~~~ 97 (106)
+||- ..+|+-||+|..+.+... +...++=.+.+ .++.+++.|++.-.+.+..
T Consensus 247 ~~r~~~~siYfrDP~G~~iEl~td~pgf~~De~~~~l------g~~l~lp~~~e~~r~~i~~ 302 (335)
T 3oaj_A 247 RDRNYFNAIYFREHGEILFEIATDPPGFAHDETQETM------GEKLMLPVQYEPHRTQIEQ 302 (335)
T ss_dssp EECSSSEEEEEECTTSCEEEEEESCSCTTSSSCTTTT------TSSBCCCGGGGGGHHHHHH
T ss_pred ccCCcEEEEEEECCCCcEEEEEeCCCCCCcCCChHHh------CccccCCchhhhhHHHHHh
Confidence 4553 459999999999998865 44433322211 1478888898887665543
No 279
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=22.44 E-value=83 Score=26.34 Aligned_cols=46 Identities=24% Similarity=0.452 Sum_probs=29.1
Q ss_pred eeeecCCccccce---eeEEEEEecccccCCCCceeEecceeEEEEcCCCcEEEe
Q psy17586 7 LHFIGGTLPLCRP---LMYSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDY 58 (106)
Q Consensus 7 ~~~~~g~~~~~~~---~~y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~ 58 (106)
.-||-.|.+.-|+ +.|+++....+.. -+++...+.|.||+|..+.-
T Consensus 105 ~~fi~TDr~iYrPGqtV~~r~i~~d~~~~------p~~~~~~v~i~dP~g~~i~~ 153 (627)
T 3hrz_A 105 FLFIQTDKGIYTPGSPVLYRVFSMDHNTS------KMNKTVIVEFQTPEGILVSS 153 (627)
T ss_dssp CEEEEESCSEECTTCEECEEEEESCC-------------CEEEEEECTTCCEEEE
T ss_pred cEEEECCCCccCCCCEEEEEEEEECCCCc------ccCccEEEEEECCCCCEEEE
Confidence 3467777777777 5577777533221 13678889999999988774
No 280
>3by9_A Sensor protein; histidine kinase sensor domain, phosphoprotein, transferase, two-component regulatory system; 1.70A {Vibrio cholerae}
Probab=22.35 E-value=58 Score=22.23 Aligned_cols=18 Identities=6% Similarity=0.021 Sum_probs=15.1
Q ss_pred ecceeEEEEcCCCcEEEe
Q psy17586 41 DHTIIMYLIDPEGLFVDY 58 (106)
Q Consensus 41 DHSa~iYLmDPdGrfv~~ 58 (106)
..+..+||+|++|.++..
T Consensus 161 ~~~g~~~l~d~~G~ii~~ 178 (260)
T 3by9_A 161 NKSSYFVATDDHQVVFMS 178 (260)
T ss_dssp CSSCEEEEECTTCBEEEE
T ss_pred cCCCcEEEECCCCeEEEc
Confidence 356789999999999876
No 281
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=22.19 E-value=60 Score=22.71 Aligned_cols=19 Identities=16% Similarity=0.114 Sum_probs=14.4
Q ss_pred eeEEEEcCCCcEEEeecCCC
Q psy17586 44 IIMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~ 63 (106)
-.+||+| +|+.+..+-...
T Consensus 135 R~tfvId-dG~V~~~~v~~~ 153 (171)
T 2xhf_A 135 RYAMLID-DNKIRSVSTEPD 153 (171)
T ss_dssp CEEEEEE-TTEEEEEEETTS
T ss_pred EEEEEEe-CCEEEEEEEeCC
Confidence 3589999 999888875543
No 282
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=22.07 E-value=1.1e+02 Score=25.09 Aligned_cols=45 Identities=29% Similarity=0.511 Sum_probs=28.5
Q ss_pred eeecCCccccce---eeEEEEEecccccCCCCceeEecceeEEEEcCCCcEEEe
Q psy17586 8 HFIGGTLPLCRP---LMYSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDY 58 (106)
Q Consensus 8 ~~~~g~~~~~~~---~~y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~ 58 (106)
-||-.|.+.-|+ +.|+++....... -+++...++|.||+|..+.-
T Consensus 108 ~fi~TDR~iYrPGqtV~~r~i~~d~~~~------p~~~~v~v~l~dP~g~~i~~ 155 (645)
T 2hr0_A 108 LFIQTDKTIYTPGSTVLYRIFTVNHKLL------PVGRTVMVNIENPEGIPVKQ 155 (645)
T ss_dssp EEEEESCSBCCTTSEEEEEEEEECTTSC------BCCCEEEEEEECTTSCEEEE
T ss_pred EEEEcCCccCCCCCEEEEEEEEECCCCc------ccCceEEEEEECCCCCEEEE
Confidence 456666666666 5577766532211 13356789999999987664
No 283
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=21.86 E-value=66 Score=18.72 Aligned_cols=14 Identities=14% Similarity=0.534 Sum_probs=11.1
Q ss_pred eEEEEcCCCcEEEe
Q psy17586 45 IMYLIDPEGLFVDY 58 (106)
Q Consensus 45 ~iYLmDPdGrfv~~ 58 (106)
.++++|++|+++..
T Consensus 29 ~i~~~d~~g~i~~~ 42 (126)
T 3bwl_A 29 MIDVLDADGTICEV 42 (126)
T ss_dssp EEEEECTTCBEEEE
T ss_pred EEEEEcCCCCEEEE
Confidence 57889999997754
No 284
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=21.83 E-value=53 Score=20.61 Aligned_cols=16 Identities=19% Similarity=0.204 Sum_probs=13.1
Q ss_pred eeEEEEcCCCcEEEee
Q psy17586 44 IIMYLIDPEGLFVDYY 59 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f 59 (106)
+.|+|+|++|+.+.--
T Consensus 49 ~rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 49 VSASVIDTDGKVLYGS 64 (122)
T ss_dssp CEEEEEETTSCEEEET
T ss_pred cEEEEECCCCcEEEeC
Confidence 5799999999977643
No 285
>1ryp_G 20S proteasome; multicatalytic proteinase, protein degradation, antigen processing, hydrolase, protease; 1.90A {Saccharomyces cerevisiae} SCOP: d.153.1.4 PDB: 1jd2_F* 1g65_F 1vsy_G 2f16_F* 2fak_F* 2fny_F* 2gpl_F* 3d29_F* 3dy3_F* 3dy4_F* 3e47_F* 3gpj_F* 3gpt_F* 3gpw_F* 3hye_F* 3l5q_L 3mg0_F* 3mg4_F* 3okj_F* 3shj_F* ...
Probab=21.61 E-value=2.3e+02 Score=20.36 Aligned_cols=16 Identities=19% Similarity=0.644 Sum_probs=12.9
Q ss_pred cceeEEEEcCCCcEEE
Q psy17586 42 HTIIMYLIDPEGLFVD 57 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~ 57 (106)
.-..+|.+||.|.+..
T Consensus 140 ~gp~Ly~idp~G~~~~ 155 (244)
T 1ryp_G 140 NGAHLYMLEPSGSYWG 155 (244)
T ss_dssp TEEEEEEECTTSCEEE
T ss_pred CcCEEEEECCCCCEEE
Confidence 3468999999998865
No 286
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=21.55 E-value=57 Score=22.77 Aligned_cols=19 Identities=5% Similarity=0.205 Sum_probs=16.8
Q ss_pred cceeEEEEcCCCcEEEeec
Q psy17586 42 HTIIMYLIDPEGLFVDYYG 60 (106)
Q Consensus 42 HSa~iYLmDPdGrfv~~f~ 60 (106)
+...+|++|.+|++++++.
T Consensus 87 ~~~~~~Vvd~~~~lvGivt 105 (205)
T 3kxr_A 87 CNDNLFIVDEADKYLGTVR 105 (205)
T ss_dssp TCCEEEEECTTCBEEEEEE
T ss_pred CeeEEEEEcCCCeEEEEEE
Confidence 6678999999999999976
No 287
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=21.48 E-value=1.1e+02 Score=20.69 Aligned_cols=39 Identities=5% Similarity=-0.030 Sum_probs=29.0
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
.|-|...-.++++ ++|+.+..+.-..+.+++.+.|..++
T Consensus 187 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 187 QYNVMAVPKIVIQ-VNGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HTTCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred hCCCcccCeEEEE-eCCceeEEEcCCCCHHHHHHHHHHhh
Confidence 4777777776665 69998887777778888888777654
No 288
>2e67_A Hypothetical protein TTHB029; NPPSFA, national project on protein ST and functional analyses, structural genomics; 2.90A {Thermus thermophilus}
Probab=21.38 E-value=24 Score=26.42 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=26.8
Q ss_pred EEcCCCcEEEe---ecCCCCHHHHHHHHHHHHHHHHhh
Q psy17586 48 LIDPEGLFVDY---YGQNKKPEEVSNSIIVNMMKYENL 82 (106)
Q Consensus 48 LmDPdGrfv~~---f~~~~speeiAe~Ir~~l~~~~~~ 82 (106)
|+|++|.|... +......+++...|+.-++++.+.
T Consensus 81 Lvd~~G~F~~~~~~~~~~~~~~ev~~El~AQi~~f~~~ 118 (264)
T 2e67_A 81 LRDEAGYFPESLEALWRKARAEEVERELKAQIQAAAKL 118 (264)
T ss_dssp GCBTTTBCCSSHHHHHHHCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCCchhHHHHhccCCHHHHHHHHHHHHHHHHHh
Confidence 78899988543 223467899999999999888776
No 289
>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A
Probab=21.36 E-value=70 Score=23.46 Aligned_cols=21 Identities=29% Similarity=0.765 Sum_probs=16.9
Q ss_pred ceeEEEEcCCCcEEEeecCCC
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNK 63 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~ 63 (106)
..++|+.||+|..+.++..+.
T Consensus 253 ~~~~y~~DPdG~~iE~~~~~~ 273 (323)
T 1f1u_A 253 AFYLYILDPDGHRIEIYTQDY 273 (323)
T ss_dssp CEEEEEECTTCCEEEEEECCC
T ss_pred cEEEEEECCCCCEEEEEeCCE
Confidence 456899999999999986443
No 290
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=21.22 E-value=94 Score=21.52 Aligned_cols=41 Identities=7% Similarity=0.010 Sum_probs=32.3
Q ss_pred CceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 36 FWFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 36 ~dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
..|-|.-.-.++|+ ++|+.+..+.-..+.+++.+.|..++.
T Consensus 78 ~~~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l~ 118 (222)
T 3dxb_A 78 PKYGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANLA 118 (222)
T ss_dssp GGGTCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred HHcCCCcCCEEEEE-ECCeEEEEeccccChHHHHHHHHhhcc
Confidence 35778777777777 599999888777888999888887774
No 291
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=21.22 E-value=1.2e+02 Score=21.68 Aligned_cols=28 Identities=7% Similarity=-0.204 Sum_probs=23.6
Q ss_pred CCceeEecceeEEEEcCCCcEEEeecCC
Q psy17586 35 IFWFQVDHTIIMYLIDPEGLFVDYYGQN 62 (106)
Q Consensus 35 ~~dY~VDHSa~iYLmDPdGrfv~~f~~~ 62 (106)
++++++.....++.+||+|+++-.+..+
T Consensus 47 dG~ilvs~~~~V~~~d~~G~~~W~~~~~ 74 (276)
T 3no2_A 47 AGEILFSYSKGAKMITRDGRELWNIAAP 74 (276)
T ss_dssp TSCEEEECBSEEEEECTTSCEEEEEECC
T ss_pred CCCEEEeCCCCEEEECCCCCEEEEEcCC
Confidence 5678888888899999999999888764
No 292
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=21.20 E-value=64 Score=18.44 Aligned_cols=20 Identities=10% Similarity=0.114 Sum_probs=13.1
Q ss_pred eEecc-eeEEEEcCCCcEEEe
Q psy17586 39 QVDHT-IIMYLIDPEGLFVDY 58 (106)
Q Consensus 39 ~VDHS-a~iYLmDPdGrfv~~ 58 (106)
+++++ ..++++|++|+++..
T Consensus 24 i~~~~~~~i~~~d~~g~i~~~ 44 (125)
T 3fc7_A 24 LVSDSPDGIVHLTTNGTILSV 44 (125)
T ss_dssp --CCSCCEEEEEETTSBEEEE
T ss_pred HHhcCCCeEEEEcCCCeEEEE
Confidence 45554 368889999987754
No 293
>2hz5_A Dynein light chain 2A, cytoplasmic; DNLC2A, transport protein; 2.10A {Homo sapiens} SCOP: d.110.7.1 PDB: 2b95_A
Probab=21.15 E-value=1.1e+02 Score=20.20 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=23.9
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYE 80 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~ 80 (106)
..+.++|.+|..+..-.......+.|..+..+..+.+
T Consensus 28 ~G~iIln~~G~pIrSt~d~~~~~~yA~li~~L~~~A~ 64 (106)
T 2hz5_A 28 QGIIVVNTEGIPIKSTMDNPTTTQYASLMHSFILKAR 64 (106)
T ss_dssp EEEEEECTTCCEEEESSCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCeEEEecCchHHHHHHHHHHHHHHHHH
Confidence 4567889999887755433345566776666664443
No 294
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=21.12 E-value=1.1e+02 Score=18.56 Aligned_cols=28 Identities=14% Similarity=0.163 Sum_probs=21.9
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHhhh
Q psy17586 56 VDYYGQNKKPEEVSNSIIVNMMKYENLK 83 (106)
Q Consensus 56 v~~f~~~~speeiAe~Ir~~l~~~~~~~ 83 (106)
..++..+.+++++.+.|+.++..+++..
T Consensus 105 ~~~l~KP~~~~~l~~~i~~~~~~~~~~~ 132 (143)
T 2qv0_A 105 FDYILKPYQESRIINMLQKLTTAWEQQN 132 (143)
T ss_dssp SEEEESSCCHHHHHHHHHHHHHHHHHC-
T ss_pred ceEEeCCCCHHHHHHHHHHHHHHHHhcc
Confidence 4567778899999999999998776443
No 295
>3fbz_A ORF140, putative uncharacterized protein; archaeal virus, extremophiles, lipothrixviridae, structural protein; HET: BOG; 2.30A {Acidianus filamentous virus 1}
Probab=21.01 E-value=50 Score=23.16 Aligned_cols=40 Identities=15% Similarity=0.224 Sum_probs=32.3
Q ss_pred CCHHHHHHHHHHHH-HHHH--hhhcCCcchhhhhhhccCCCCC
Q psy17586 63 KKPEEVSNSIIVNM-MKYE--NLKKKSWFEDTIESLTSSGKPA 102 (106)
Q Consensus 63 ~speeiAe~Ir~~l-~~~~--~~~~~~~~~~~~~~~~~~~~~~ 102 (106)
.-|++||+.+..-+ ++|+ .+++.++--.++|-+.++|-|.
T Consensus 29 iiP~dMA~sVT~~~TA~W~~~~~~~~K~R~~~~dI~KT~~i~~ 71 (140)
T 3fbz_A 29 LIPEDMAISVTESITADWKQYNDMMSKVRNETLDILKTNKVAT 71 (140)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCCHHHHHHHhhhHhhhHHhccCHHHHHHHHHHHHHhcCCCCc
Confidence 34788999888777 5665 7889999889999999998763
No 296
>2l7q_A Conserved protein found in conjugate transposon; NESG, structural genomics, PSI-biology; NMR {Bacteroides vulgatus}
Probab=20.70 E-value=1e+02 Score=21.50 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=23.3
Q ss_pred eeEEEEEecccccCCCCceeEecceeEEEEcCCCcEEEe
Q psy17586 20 LMYSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDY 58 (106)
Q Consensus 20 ~~y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~ 58 (106)
..||+||+-.. -+..++.-+|+.|--|+.+.+
T Consensus 78 ~~FRLYYtS~S-------~~~~q~idv~veDnfGq~~ql 109 (124)
T 2l7q_A 78 WKFRLYYTSQS-------DKEAQTIDLYFEDNWGNLQQL 109 (124)
T ss_dssp SEEEEEEEECS-------CCSCEEEEEEEEETTTEEEEE
T ss_pred CeEEEEEecCC-------cccCceEEEEEEcCCCcEEEE
Confidence 56999998332 124678889999999987654
No 297
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=20.62 E-value=1e+02 Score=19.90 Aligned_cols=37 Identities=5% Similarity=-0.054 Sum_probs=26.4
Q ss_pred eeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHH
Q psy17586 38 FQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMM 77 (106)
Q Consensus 38 Y~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~ 77 (106)
+-|.-|-.+++ +|+++.......+.+++.+.|..+|.
T Consensus 146 ~gv~gTPtfiI---NGky~v~~~~~~s~e~~~~~i~~Ll~ 182 (184)
T 4dvc_A 146 SGLTGVPAVVV---NNRYLVQGQSAKSLDEYFDLVNYLLT 182 (184)
T ss_dssp HTCCSSSEEEE---TTTEEECGGGCSSHHHHHHHHHHHTT
T ss_pred cCCCcCCEEEE---CCEEeeCCcCCCCHHHHHHHHHHHHh
Confidence 45666666555 68887766666788999988877763
No 298
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=20.51 E-value=60 Score=19.96 Aligned_cols=35 Identities=14% Similarity=0.121 Sum_probs=22.7
Q ss_pred ceeEecceeEEEEcCCCcEEEeecCCCCHHHHHHHHH
Q psy17586 37 WFQVDHTIIMYLIDPEGLFVDYYGQNKKPEEVSNSII 73 (106)
Q Consensus 37 dY~VDHSa~iYLmDPdGrfv~~f~~~~speeiAe~Ir 73 (106)
.|-|.-.-.++++ ++|+.+..+.-.. ++++.+.|+
T Consensus 78 ~~~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~ 112 (114)
T 2oe3_A 78 ECEVTAMPTFVLG-KDGQLIGKIIGAN-PTALEKGIK 112 (114)
T ss_dssp HTTCCSBSEEEEE-ETTEEEEEEESSC-HHHHHHHHH
T ss_pred HCCCCcccEEEEE-eCCeEEEEEeCCC-HHHHHHHHH
Confidence 3667666666555 8999887665444 666655443
No 299
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=20.48 E-value=98 Score=18.96 Aligned_cols=28 Identities=11% Similarity=0.038 Sum_probs=20.6
Q ss_pred EEeecCCCCHHHHHHHHHHHHHHHHhhh
Q psy17586 56 VDYYGQNKKPEEVSNSIIVNMMKYENLK 83 (106)
Q Consensus 56 v~~f~~~~speeiAe~Ir~~l~~~~~~~ 83 (106)
..++..+.+++++.+.|+.++..+++..
T Consensus 106 ~~~l~kp~~~~~L~~~i~~~~~~~~~~~ 133 (147)
T 2zay_A 106 IDFIAKPVNAIRLSARIKRVLKLLYEDL 133 (147)
T ss_dssp SEEEESSCCHHHHHHHHHHHHHHHC---
T ss_pred CEEEeCCCCHHHHHHHHHHHHHHHHhcc
Confidence 4677778899999999999987765443
No 300
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=20.41 E-value=49 Score=24.28 Aligned_cols=49 Identities=6% Similarity=-0.117 Sum_probs=35.6
Q ss_pred EecceeEEEEcCCCcEEEee-cCCCCHHHHHHHHHHHHHHHHhhhcCCcc
Q psy17586 40 VDHTIIMYLIDPEGLFVDYY-GQNKKPEEVSNSIIVNMMKYENLKKKSWF 88 (106)
Q Consensus 40 VDHSa~iYLmDPdGrfv~~f-~~~~speeiAe~Ir~~l~~~~~~~~~~~~ 88 (106)
..-.+.+.|+|-+..|+.-- +.....+++++.+.++++.+++.+.+-++
T Consensus 41 ~~~~tALlVID~Qn~f~~~~~~~~~~~~~vv~~i~~Ll~~aR~~g~pVI~ 90 (236)
T 3ot4_A 41 LKAPYGLLIVDFVNGFADPAQFGGGNIAAAIETTRTVLAAARERGWAVAH 90 (236)
T ss_dssp CCSSEEEEEECCBHHHHSTTTSCCSSHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCeEEEEEeCchhhcCCCCccccCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 34567899999998886421 12245788999999999998887766544
No 301
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=20.36 E-value=1.3e+02 Score=24.17 Aligned_cols=46 Identities=20% Similarity=0.317 Sum_probs=31.5
Q ss_pred eeecCCccccce---eeEEEEEecccccCCCCceeEecceeEEEEcCCCcEEEee
Q psy17586 8 HFIGGTLPLCRP---LMYSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDYY 59 (106)
Q Consensus 8 ~~~~g~~~~~~~---~~y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~f 59 (106)
-||--|.|.-|+ +.|+++..-.+... .++...++|.||+|..+.-.
T Consensus 122 vFIqTDr~iYrPGqtV~~r~i~~d~~~~p------~~~~~~v~i~dp~g~~v~~~ 170 (656)
T 4fxk_A 122 LFLQTDQPIYNPGQRVRYRVFALDQKMRP------STDTITVMVENSHGLRVRKK 170 (656)
T ss_dssp EEEEESCSEECTTCEEEEEEEEECSSSSB------CCCCEEEEEECTTCCEEEEE
T ss_pred EEEECCCCCcCCCCEEEEEEEEECCccCc------CcccceEEEECCCCcEEeee
Confidence 367778888887 66888776433221 34566789999999876543
No 302
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=20.19 E-value=1.4e+02 Score=18.23 Aligned_cols=29 Identities=10% Similarity=0.133 Sum_probs=20.5
Q ss_pred eeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHH
Q psy17586 44 IIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNM 76 (106)
Q Consensus 44 a~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l 76 (106)
..+.++|.+|++++++. ..++...+...+
T Consensus 99 ~~l~Vvd~~g~~~Giit----~~dll~~~~~~~ 127 (133)
T 2ef7_A 99 RHLPVVDDKGNLKGIIS----IRDITRAIDDMF 127 (133)
T ss_dssp SEEEEECTTSCEEEEEE----HHHHHHHHHHHC
T ss_pred CEEEEECCCCeEEEEEE----HHHHHHHHHHHH
Confidence 35778899999999976 556665554443
No 303
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=20.18 E-value=76 Score=22.37 Aligned_cols=43 Identities=12% Similarity=0.013 Sum_probs=33.3
Q ss_pred ceeEEEEcCCCcEEEeecCCCCHHHHHHHHHHHHHHHHhhhcCCcc
Q psy17586 43 TIIMYLIDPEGLFVDYYGQNKKPEEVSNSIIVNMMKYENLKKKSWF 88 (106)
Q Consensus 43 Sa~iYLmDPdGrfv~~f~~~~speeiAe~Ir~~l~~~~~~~~~~~~ 88 (106)
.+.+.++|-+..|... -...+++++.+.++++.+++.+.+-++
T Consensus 14 ~~ALlvID~Q~~f~~~---~~~~~~~i~~i~~l~~~ar~~g~pVi~ 56 (199)
T 2b34_A 14 NSALFVCDLQEKFASN---IKYFPEIITTSRRLIDAARILSIPTIV 56 (199)
T ss_dssp TEEEEEECCBGGGTTS---STTHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEEEeCHhHHhhh---cCCHHHHHHHHHHHHHHHHHCCCcEEE
Confidence 4678899999988753 245688999999999998887766444
No 304
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=20.17 E-value=1.4e+02 Score=18.61 Aligned_cols=27 Identities=7% Similarity=0.094 Sum_probs=22.5
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHHHHh
Q psy17586 55 FVDYYGQNKKPEEVSNSIIVNMMKYEN 81 (106)
Q Consensus 55 fv~~f~~~~speeiAe~Ir~~l~~~~~ 81 (106)
...++..+.+++++.+.|+.+++..+.
T Consensus 110 ~~~~l~KP~~~~~l~~~i~~~l~~~~~ 136 (153)
T 3hv2_A 110 IYRYLSKPWDDQELLLALRQALEHQHS 136 (153)
T ss_dssp CSEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred cceEEeCCCCHHHHHHHHHHHHHHhHH
Confidence 567788889999999999999976653
No 305
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=20.15 E-value=41 Score=23.51 Aligned_cols=20 Identities=25% Similarity=0.390 Sum_probs=17.2
Q ss_pred hhcCCcchhhhhhhccCCCC
Q psy17586 82 LKKKSWFEDTIESLTSSGKP 101 (106)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~ 101 (106)
.|+.++|.||||-|+.||.+
T Consensus 29 ~KkDkLykDAietAa~S~d~ 48 (125)
T 3qil_A 29 AKKDSLYKDAMQYASESKDT 48 (125)
T ss_dssp CSCCCCSSHHHHTTTSSCCS
T ss_pred HHhcccHHHHHHHHHHcCCH
Confidence 46788999999999999875
No 306
>2l3b_A Conserved protein found in conjugate transposon; beta, structural genomics, PSI-biology; NMR {Bacteroides thetaiotaomicron}
Probab=20.13 E-value=1.5e+02 Score=20.76 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=23.5
Q ss_pred eeEEEEEecccccCCCCceeEecceeEEEEcCCCcEEEe
Q psy17586 20 LMYSIISTIPYLLSFIFWFQVDHTIIMYLIDPEGLFVDY 58 (106)
Q Consensus 20 ~~y~v~~~~~~~~~~~~dY~VDHSa~iYLmDPdGrfv~~ 58 (106)
..||+||+-.. +..+|.-+|+.|--|+.+.+
T Consensus 79 ~~FRLYYtS~s--------~~~q~idv~veDnfGq~~ql 109 (130)
T 2l3b_A 79 ETFRLYYTSAS--------TDQQTVDVYFQDSFGQLQQL 109 (130)
T ss_dssp SEEEEEEECCC--------SSCEEEEEEEECTTSCEEEE
T ss_pred CeEEEEEecCC--------CCCceEEEEEEcCCCCEEEE
Confidence 56999998332 35678889999999987654
Done!