BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17587
(231 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus GN=Ddx46
PE=1 SV=2
Length = 1032
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/147 (65%), Positives = 116/147 (78%), Gaps = 9/147 (6%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
++K+LM+A YPC+SLHGGIDQYDRDS I DFKNG +LL+ATSVAARGLDVKHL LVVNY
Sbjct: 635 LLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNY 694
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMW- 156
CPNHYEDYVHR GRTGRAGNKG+AYTFIT +Q R+AG+II+ALE SG +P DL+K+W
Sbjct: 695 SCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWS 754
Query: 157 -------AEDLIVRTFCFRAGNKGFAY 176
AE I++ +G KGF +
Sbjct: 755 DFKDQQKAEGKIIKKSSGFSG-KGFKF 780
>sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus
GN=Ddx46 PE=1 SV=1
Length = 1032
Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/147 (65%), Positives = 116/147 (78%), Gaps = 9/147 (6%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
++K+LM+A YPC+SLHGGIDQYDRDS I DFKNG +LL+ATSVAARGLDVKHL LVVNY
Sbjct: 635 LLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNY 694
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMW- 156
CPNHYEDYVHR GRTGRAGNKG+AYTFIT +Q R+AG+II+ALE SG +P DL+K+W
Sbjct: 695 SCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWS 754
Query: 157 -------AEDLIVRTFCFRAGNKGFAY 176
AE I++ +G KGF +
Sbjct: 755 DFKDQQKAEGKIIKKSSGFSG-KGFKF 780
>sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46
PE=1 SV=2
Length = 1031
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/147 (65%), Positives = 116/147 (78%), Gaps = 9/147 (6%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
++K+LM+A YPC+SLHGGIDQYDRDS I DFKNG +LL+ATSVAARGLDVKHL LVVNY
Sbjct: 635 LLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNY 694
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMW- 156
CPNHYEDYVHR GRTGRAGNKG+AYTFIT +Q R+AG+II+ALE SG +P DL+K+W
Sbjct: 695 SCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWS 754
Query: 157 -------AEDLIVRTFCFRAGNKGFAY 176
AE I++ +G KGF +
Sbjct: 755 DFKDQQKAEGKIIKKSSGFSG-KGFKF 780
>sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii GN=DDX46
PE=2 SV=1
Length = 1032
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/147 (65%), Positives = 116/147 (78%), Gaps = 9/147 (6%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
++K+LM+A YPC+SLHGGIDQYDRDS I DFKNG +LL+ATSVAARGLDVKHL LVVNY
Sbjct: 635 LLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNY 694
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMW- 156
CPNHYEDYVHR GRTGRAGNKG+AYTFIT +Q R+AG+II+ALE SG +P DL+K+W
Sbjct: 695 SCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWS 754
Query: 157 -------AEDLIVRTFCFRAGNKGFAY 176
AE I++ +G KGF +
Sbjct: 755 DFKDQQKAEGKIIKKSSGFSG-KGFKF 780
>sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio GN=ddx46
PE=2 SV=1
Length = 1018
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/147 (63%), Positives = 115/147 (78%), Gaps = 9/147 (6%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
++K+LMKA YPC+SLHGGIDQYDRDS I DFKNG RLL+ATSVAARGLDVK L LVVNY
Sbjct: 603 LLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVVNY 662
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMW- 156
CPNHYEDYVHR GRTGRAGNKG+AYTFIT Q R++G+I++ALE SG +P +L+++W
Sbjct: 663 SCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQARYSGDILKALELSGSSVPAELEQLWT 722
Query: 157 -------AEDLIVRTFCFRAGNKGFAY 176
AE I+++ +G KGF +
Sbjct: 723 NFKEQQKAEGKIIKSSSGFSG-KGFKF 748
>sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella
zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL
31084) GN=PRP5 PE=3 SV=2
Length = 1207
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 93/118 (78%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
++KELM GYPC+S+HGG DQ DRDSTI DFK G V +LIATSVAARGLDVK L LV+NY
Sbjct: 843 LLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPILIATSVAARGLDVKQLKLVINY 902
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
D PNH EDYVHR GRTGRAGN G A TF+T EQE A I +ALE SG PIP+ L++M
Sbjct: 903 DAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAPGIAKALEQSGQPIPDRLNEM 960
>sp|A1CQA9|PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=prp5 PE=3 SV=1
Length = 1192
Score = 174 bits (440), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 90/154 (58%), Positives = 109/154 (70%), Gaps = 2/154 (1%)
Query: 37 AIVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVN 96
A+++ELM+ GYPC+S+HGG DQ DRDSTI DFK G +LIATSVAARGLDVK L LVVN
Sbjct: 824 ALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVN 883
Query: 97 YDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMW 156
YD PNH EDYVHR GRTGRAGN G A TF+T EQER++ +I +AL+ SG +PE + KM
Sbjct: 884 YDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKALKQSGQQVPEPVQKMV 943
Query: 157 AEDL-IVRTFCFRAGNKGFAYTFIT-LEQERHAG 188
L V+ +A GF + L+QER A
Sbjct: 944 DSFLEKVKAGKEKASASGFGGKGLERLDQERDAA 977
>sp|A1D373|PRP5_NEOFI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=prp5 PE=3 SV=1
Length = 1193
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 108/155 (69%), Gaps = 2/155 (1%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+++ELM+ GYPC+S+HGG DQ DRDSTI DFK G +LIATSVAARGLDVK L LVVNY
Sbjct: 825 LLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPILIATSVAARGLDVKQLKLVVNY 884
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWA 157
D PNH EDYVHR GRTGRAGN G A TF+T EQER++ +I +AL SG +PE + KM
Sbjct: 885 DAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKMVD 944
Query: 158 EDL-IVRTFCFRAGNKGFAYTFIT-LEQERHAGEI 190
L V+ +A GF + L+QER A +
Sbjct: 945 SFLEKVKAGKEKASASGFGGKGLERLDQERDAARM 979
>sp|Q5BDW4|PRP5_EMENI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=prp5 PE=3 SV=1
Length = 1173
Score = 172 bits (436), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 110/155 (70%), Gaps = 2/155 (1%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+++ELM+ GYPC+S+HGG DQ DRDSTI DFK G +LIATSVAARGLDVK L LVVNY
Sbjct: 809 LLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNY 868
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWA 157
D PNH EDYVHR GRTGRAGN G A TF+T +QER++ +I +AL+ SG +PE + K+
Sbjct: 869 DAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQEVPEAVQKLVD 928
Query: 158 EDL-IVRTFCFRAGNKGFAYTFIT-LEQERHAGEI 190
L V+ +A N GF + L+QER A +
Sbjct: 929 SFLEKVKAGKEKASNSGFGGKGLERLDQERDAARM 963
>sp|Q2U2J6|PRP5_ASPOR Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=prp5 PE=3 SV=1
Length = 1186
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 109/155 (70%), Gaps = 2/155 (1%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+++ELM+ GYPC+S+HGG DQ DRDSTI DFK G +LIATSVAARGLDVK L LVVNY
Sbjct: 822 LLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNY 881
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWA 157
D PNH EDYVHR GRTGRAGN G A TF+T +QER++ +I +AL+ SG +PE + KM
Sbjct: 882 DAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQSVPEPVQKMVD 941
Query: 158 EDL-IVRTFCFRAGNKGFAYTFIT-LEQERHAGEI 190
L V+ +A GF + L+QER A +
Sbjct: 942 SFLEKVKAGKEKASASGFGGKGLERLDQERDAARM 976
>sp|Q4WT99|PRP5_ASPFU Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=prp5 PE=3 SV=1
Length = 1211
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 108/155 (69%), Gaps = 2/155 (1%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+++ELM+ GYPC+S+HGG DQ DRDSTI DFK G +LIATSVAARGLDVK L LVVNY
Sbjct: 843 LLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNY 902
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWA 157
D PNH EDYVHR GRTGRAGN G A TF+T EQER++ +I +AL SG +PE + KM
Sbjct: 903 DAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKMVD 962
Query: 158 EDL-IVRTFCFRAGNKGFAYTFIT-LEQERHAGEI 190
L V+ +A GF + L+QER A +
Sbjct: 963 SFLEKVKAGKEKASASGFGGKGLERLDQERDAARM 997
>sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp.
japonica GN=Os08g0159900 PE=2 SV=1
Length = 1049
Score = 171 bits (433), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 102/133 (76%), Gaps = 6/133 (4%)
Query: 26 FKNGKVRLLV-----C-AIVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIAT 79
F GK+ + V C +++K+L + GYPCLSLHGG DQ DR+ST+ DFK+ LLIAT
Sbjct: 669 FDKGKILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIAT 728
Query: 80 SVAARGLDVKHLNLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIR 139
SVAARGLDVK L LVVNYD PNHYEDYVHR GRTGRAG KGFA TFI+ E+ER+A ++++
Sbjct: 729 SVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVK 788
Query: 140 ALEASGVPIPEDL 152
ALE S +PEDL
Sbjct: 789 ALELSEQAVPEDL 801
>sp|A2QQA8|PRP5_ASPNC Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=prp5 PE=3 SV=2
Length = 1180
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 110/156 (70%), Gaps = 2/156 (1%)
Query: 37 AIVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVN 96
A+++ELM+ GYPC+S+HGG DQ DRDSTI DFK G +LIATSVAARGLDVK L LVVN
Sbjct: 814 ALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVN 873
Query: 97 YDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMW 156
YD PNH EDYVHR GRTGRAGN G A TF+T +QER++ +I +AL+ SG +PE + K+
Sbjct: 874 YDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQKVPEPVQKLV 933
Query: 157 AEDL-IVRTFCFRAGNKGFAYTFIT-LEQERHAGEI 190
L V+ +A GF + L+QER A +
Sbjct: 934 DAFLEKVKAGKEKASASGFGGKGLERLDQERDAARM 969
>sp|Q1DHB2|PRP5_COCIM Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides
immitis (strain RS) GN=PRP5 PE=3 SV=1
Length = 1197
Score = 170 bits (431), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 109/153 (71%), Gaps = 2/153 (1%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
++++LM+ GYPC+S+HGG DQ DRDSTI DFK G +LIATSVAARGLDVK L LV+NY
Sbjct: 827 LLRDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGIFPVLIATSVAARGLDVKQLKLVINY 886
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWA 157
D PNH EDYVHR GRTGRAGN G A TF+T EQER++ +I +AL+ SG +PE + KM
Sbjct: 887 DAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKALKQSGQSVPEAVQKMVD 946
Query: 158 EDL-IVRTFCFRAGNKGFAYTFIT-LEQERHAG 188
L V++ +A GF + L+QER A
Sbjct: 947 SFLEKVKSGKEKASASGFGGKGLERLDQERDAA 979
>sp|A7ENE0|PRP5_SCLS1 Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp5
PE=3 SV=1
Length = 1114
Score = 170 bits (430), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 95/118 (80%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
++K+LM+ GYPC+S+HGG DQ DRDSTI DFK G V ++IATSVAARGLDVK L LVVN+
Sbjct: 749 LLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGVVPIMIATSVAARGLDVKQLKLVVNF 808
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
D PNH EDYVHR GRTGRAGN G A TFIT EQE+++ I +ALE SG +PE L++M
Sbjct: 809 DAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQYSVGIAKALEQSGQEVPERLNEM 866
>sp|Q0D1K3|PRP5_ASPTN Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=prp5 PE=3 SV=1
Length = 1181
Score = 169 bits (427), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 108/155 (69%), Gaps = 2/155 (1%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+++ELM+ GYPC+S+HGG DQ DRDSTI DFK G +LIATSVAARGLDVK L LVVNY
Sbjct: 817 LLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNY 876
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWA 157
D PNH EDYVHR GRTGRAGN G A TF+T +QER + +I +AL+ SG +PE + +M
Sbjct: 877 DAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERFSVDIAKALKQSGQKVPEPVQQMVD 936
Query: 158 EDL-IVRTFCFRAGNKGFAYTFIT-LEQERHAGEI 190
L V+ +A GF + L+QER A +
Sbjct: 937 SFLEKVKAGKEKASASGFGGKGLERLDQERDAARM 971
>sp|A6RW79|PRP5_BOTFB Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia
fuckeliana (strain B05.10) GN=prp5 PE=3 SV=1
Length = 1151
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 95/118 (80%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
++K+LM+ GYPC+S+HGG DQ DRDSTI DFK G V ++IATSVAARGLDVK L LVVN+
Sbjct: 820 LLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFKAGVVPIMIATSVAARGLDVKQLKLVVNF 879
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
D PNH EDYVHR GRTGRAGN G A TFIT EQE+++ I +ALE SG +P+ L++M
Sbjct: 880 DAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQEQYSVGIAKALEQSGQEVPDRLNEM 937
>sp|Q2HAD8|PRP5_CHAGB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=PRP5 PE=3 SV=1
Length = 1064
Score = 167 bits (422), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 106/156 (67%), Gaps = 5/156 (3%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+++E+++ GY C+S+HGG DQ DR+STI DFK G ++IATSVAARGLDVK L LVVNY
Sbjct: 695 LLREVLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPIMIATSVAARGLDVKQLKLVVNY 754
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM-- 155
D PNH EDYVHR GRTGRAGN G A TFIT EQE A I +ALE SG P+PE L++M
Sbjct: 755 DAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCAPGIAKALEQSGQPVPEQLNEMRK 814
Query: 156 -WAEDLIVRTFCFRAGNKGFAYTFITLEQERHAGEI 190
W E V+T + + L++ER A +
Sbjct: 815 AWKEK--VKTGKAKDASGFGGKGLERLDKEREAARV 848
>sp|A4RN46|PRP5_MAGO7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=PRP5 PE=3 SV=1
Length = 1012
Score = 166 bits (420), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/118 (66%), Positives = 92/118 (77%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+++EL++ GY C+SLHGG DQ DRDSTI DFK+G ++IATSVAARGLDVK L LVVNY
Sbjct: 644 LLRELLRKGYGCMSLHGGKDQVDRDSTISDFKSGVCPVMIATSVAARGLDVKQLKLVVNY 703
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
D PNH EDYVHR GRTGRAGN G A TF+T EQE A I +ALE SG P+PE L +M
Sbjct: 704 DAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEEQENCAIGIAKALEQSGQPVPEKLIEM 761
>sp|P0CQ98|PRP5_CRYNJ Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=PRP5 PE=3 SV=1
Length = 1072
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+ +EL++ GY C SLHGG +Q DRD I +FKNG V +++ATSVAARGLDVK L LV+NY
Sbjct: 672 LFRELLQRGYVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVINY 731
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWA 157
D PNH EDYVHR GRTGRAGNKG TFIT EQER + +I+RALEAS IP+DL KM
Sbjct: 732 DAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVDIVRALEASKAFIPDDLKKMSD 791
Query: 158 EDL-IVRTFCFRAGNKGFA 175
L +++ RA G++
Sbjct: 792 SFLGKIKSGKARAAGSGYS 810
>sp|P0CQ99|PRP5_CRYNB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=PRP5 PE=3 SV=1
Length = 1072
Score = 165 bits (418), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+ +EL++ GY C SLHGG +Q DRD I +FKNG V +++ATSVAARGLDVK L LV+NY
Sbjct: 672 LFRELLQRGYVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVINY 731
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWA 157
D PNH EDYVHR GRTGRAGNKG TFIT EQER + +I+RALEAS IP+DL KM
Sbjct: 732 DAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVDIVRALEASKAFIPDDLKKMSD 791
Query: 158 EDL-IVRTFCFRAGNKGFA 175
L +++ RA G++
Sbjct: 792 SFLGKIKSGKARAAGSGYS 810
>sp|Q7SH33|PRP5_NEUCR Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=prp-5 PE=3 SV=1
Length = 1194
Score = 164 bits (416), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 78/124 (62%), Positives = 94/124 (75%), Gaps = 3/124 (2%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+++EL++ GY C+S+HGG DQ DR+STI DFK G +LIATS+AARGLDVK L LV+NY
Sbjct: 827 LLRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPILIATSIAARGLDVKQLKLVINY 886
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM-- 155
D PNH EDYVHR GRTGRAGN G A TFIT EQE A I +ALE SG P+P+ L++M
Sbjct: 887 DAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCASGIAKALEQSGQPVPDRLNEMRK 946
Query: 156 -WAE 158
W E
Sbjct: 947 AWKE 950
>sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana
GN=RH42 PE=1 SV=2
Length = 1166
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 99/127 (77%), Gaps = 1/127 (0%)
Query: 37 AIVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVN 96
A+ ++++K+ YPCLSLHGG DQ DR+STI DFKN LLIATSVAARGLDVK L LVVN
Sbjct: 791 ALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVN 850
Query: 97 YDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMW 156
+D PNHYEDYVHR GRTGRAG KG A TFI+ + ++A ++++ALE S P+P+DL K
Sbjct: 851 FDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDL-KAL 909
Query: 157 AEDLIVR 163
A+ +V+
Sbjct: 910 ADGFMVK 916
>sp|Q553B1|DDX46_DICDI ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum
GN=helB1 PE=2 SV=1
Length = 1151
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 72/118 (61%), Positives = 91/118 (77%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+ ++L + Y CLSLHG DQ DRD TI DFKN +LIAT +A+RGLD+K LNLVVN+
Sbjct: 772 LYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNF 831
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
DCP+H EDYVHR GRTGRAGN+G AYTFIT ++ER + II+ALE SG +P++L K+
Sbjct: 832 DCPDHLEDYVHRVGRTGRAGNRGTAYTFITPDEERFSSSIIKALEQSGSKVPDELRKL 889
>sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helicase prp11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp11 PE=3 SV=1
Length = 1014
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 94/122 (77%)
Query: 37 AIVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVN 96
A++ +LMK GY S+HGG DQ+DRDSTI D+K G +LIATSV ARGLDVK L LVVN
Sbjct: 683 ALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVN 742
Query: 97 YDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMW 156
YDCPNH EDYVHR GRTGRAG+ G A TFIT EQE++A +I +AL+ S P+P++L +
Sbjct: 743 YDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTLA 802
Query: 157 AE 158
++
Sbjct: 803 SQ 804
>sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=PRP5 PE=3 SV=1
Length = 1156
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 91/120 (75%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
++K+L++ GY +SLHGG DQ DRD TI DFK G V ++ ATSVAARGLDVK L LV+NY
Sbjct: 743 LLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPIVTATSVAARGLDVKQLKLVINY 802
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWA 157
D PNH EDYVHR GRTGRAG KG TFIT EQ+R+A +II AL+AS +P +L+ M A
Sbjct: 803 DVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDIIAALKASAAHVPPELEAMAA 862
>sp|Q6CCZ1|PRP5_YARLI Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PRP5 PE=3 SV=1
Length = 974
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 75/119 (63%), Positives = 92/119 (77%)
Query: 37 AIVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVN 96
+++KEL+++GYPCLS+HGG +Q DRD I DFK+G V +LIATSVAARGLDVK L LVVN
Sbjct: 679 SLLKELIQSGYPCLSIHGGKEQADRDQAISDFKSGLVSVLIATSVAARGLDVKGLGLVVN 738
Query: 97 YDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
+D PNH EDYVHR GRTGRAG KG A TF+ +QER A EI RA+++SG P + M
Sbjct: 739 WDSPNHMEDYVHRVGRTGRAGQKGTALTFLLSDQERLAAEISRAIKSSGNAPPAPVQLM 797
>sp|Q0UN57|PRP5_PHANO Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=PRP5 PE=3 SV=2
Length = 1184
Score = 134 bits (337), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 84/120 (70%), Gaps = 2/120 (1%)
Query: 38 IVKELMKAGYPCL-SLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVN 96
++ +L KA Y + ++HG DQ DR+ I +FK G + +LIATSVAARGLDV L LV N
Sbjct: 813 LLSKLFKAKYFAVNTIHGAKDQTDRNEAINEFKQGLLNILIATSVAARGLDVPGLALVYN 872
Query: 97 YDCPNHYEDYVHRCGRTGRAGNKGFAYTFI-TLEQERHAGEIIRALEASGVPIPEDLDKM 155
+DCP H EDYVHRCGRTGRAGNKG A T I QER A I++AL+ SG +P+DL M
Sbjct: 873 FDCPTHLEDYVHRCGRTGRAGNKGLAVTLIENPGQERFAVHIVKALKESGAEVPDDLQAM 932
>sp|A3LQ55|PRP5_PICST Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=PRP5 PE=3 SV=2
Length = 875
Score = 134 bits (336), Expect = 7e-31, Method: Composition-based stats.
Identities = 65/116 (56%), Positives = 86/116 (74%), Gaps = 4/116 (3%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDF--KNGKVRLLIATSVAARGLDVKHLNLVV 95
++ +L+ + +PCL++HGG DQ DR I +F K+ V +LIATS+AARGLDVK L+LV+
Sbjct: 546 LLVKLLGSNHPCLTIHGGKDQIDRKYAIKEFSSKDSGVDILIATSIAARGLDVKGLDLVI 605
Query: 96 NYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPED 151
NYD PNH EDYVHR GRTGRAG KG A TF++ +QER +++RA+ S IPED
Sbjct: 606 NYDPPNHMEDYVHRVGRTGRAGMKGTAITFVSSDQERSVTDLVRAMTMS--KIPED 659
>sp|Q0J7Y8|RH45_ORYSJ DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp.
japonica GN=Os08g0154200 PE=3 SV=2
Length = 947
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 86/133 (64%), Gaps = 25/133 (18%)
Query: 26 FKNGKVRLLV-----C-AIVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIAT 79
F GK+ + V C +++K+L + GYPCLSLHGG DQ DR+ST+ DFK+
Sbjct: 530 FDRGKILVFVHSQDKCDSLLKDLFQRGYPCLSLHGGKDQTDRESTLADFKS--------- 580
Query: 80 SVAARGLDVKHLNLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIR 139
+L LVVNYD PNHYEDYVHR GRTG AG KGFA TFI+ E+ER+A ++ +
Sbjct: 581 ----------NLELVVNYDVPNHYEDYVHRVGRTGHAGRKGFAVTFISDEEERYAPDLAK 630
Query: 140 ALEASGVPIPEDL 152
ALE S +P+DL
Sbjct: 631 ALELSEQAVPQDL 643
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 22/25 (88%)
Query: 4 GYPCLSLHGGIDQYDRDSTIVDFKN 28
GYPCLSLHGG DQ DR+ST+ DFK+
Sbjct: 556 GYPCLSLHGGKDQTDRESTLADFKS 580
>sp|P0CQ76|DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP2 PE=3 SV=1
Length = 540
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 89/135 (65%), Gaps = 6/135 (4%)
Query: 27 KNGKVRLLVCA------IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATS 80
+NGKV + V + K L G+P L++HG Q +RD + +FK+G+ +++AT
Sbjct: 355 ENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATD 414
Query: 81 VAARGLDVKHLNLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRA 140
VA+RGLDV+ + V+NYD PN+ EDY+HR GRTGRAG KG +YT+ T++ + A E+++
Sbjct: 415 VASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQI 474
Query: 141 LEASGVPIPEDLDKM 155
L S IP +L++M
Sbjct: 475 LRESKADIPPELEEM 489
>sp|P0CQ77|DBP2_CRYNB ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP2 PE=3 SV=1
Length = 540
Score = 124 bits (311), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 89/135 (65%), Gaps = 6/135 (4%)
Query: 27 KNGKVRLLVCA------IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATS 80
+NGKV + V + K L G+P L++HG Q +RD + +FK+G+ +++AT
Sbjct: 355 ENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATD 414
Query: 81 VAARGLDVKHLNLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRA 140
VA+RGLDV+ + V+NYD PN+ EDY+HR GRTGRAG KG +YT+ T++ + A E+++
Sbjct: 415 VASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQI 474
Query: 141 LEASGVPIPEDLDKM 155
L S IP +L++M
Sbjct: 475 LRESKADIPPELEEM 489
>sp|Q6BML1|PRP5_DEBHA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=PRP5 PE=3 SV=2
Length = 913
Score = 123 bits (309), Expect = 9e-28, Method: Composition-based stats.
Identities = 59/111 (53%), Positives = 79/111 (71%), Gaps = 2/111 (1%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFK--NGKVRLLIATSVAARGLDVKHLNLVV 95
++ +L+ YPCL++HGG DQ DR I +F N V +LIATS+AARGLDVK LNLV+
Sbjct: 590 LLVKLLTEKYPCLAIHGGKDQIDRKHAIREFSSSNSGVNILIATSIAARGLDVKGLNLVI 649
Query: 96 NYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGV 146
NY+ +H EDYVHR GRTGRAG KG A TF++ +Q R ++++A+ S V
Sbjct: 650 NYEAASHMEDYVHRVGRTGRAGRKGTAITFVSSKQGRAITDLVKAMRLSKV 700
>sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana
GN=RH30 PE=2 SV=2
Length = 591
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 79/118 (66%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+ ++L G+P L++HG Q +RD + +FK+G+ ++ AT VAARGLDVK + VVNY
Sbjct: 426 VTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNY 485
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
D PN EDY+HR GRTGRAG KG A+TF T + + A E+++ L+ +G +P L +
Sbjct: 486 DFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTLSAL 543
>sp|Q9SF41|RH45_ARATH DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana
GN=RH45 PE=2 SV=1
Length = 989
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Query: 61 RDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRCGRTGRAGNKG 120
++ +I DFK+ LLIATSVAARGLDVK L LVVN+D PNHYEDYVHR GRTGRAG KG
Sbjct: 653 QEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKG 712
Query: 121 FAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWAEDLIVR 163
A TFI+ + ++A ++++ALE S P+P+D+ K AE + +
Sbjct: 713 CAVTFISEDDAKYAPDLVKALELSEQPVPDDV-KAVAEGFMAK 754
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/118 (50%), Positives = 76/118 (64%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
I ++L G+P LS+HG Q +RD + +FK+GK ++ AT VAARGLDVK + V+NY
Sbjct: 352 ITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINY 411
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
D P EDYVHR GRTGRAG KG AYTF T R A ++I LE +G + +L M
Sbjct: 412 DFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVSPELANM 469
>sp|A5DDF4|PRP5_PICGU Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PRP5 PE=3 SV=2
Length = 862
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 3/106 (2%)
Query: 42 LMKAGYPCLSLHGGIDQYDRDSTIVDF--KNGKVRLLIATSVAARGLDVKHLNLVVNYDC 99
L+ C+ +HGG DQ DR I F KNG +R+LIATS+AARGLDV+ LNLV+NYD
Sbjct: 542 LLNNQISCIVIHGGKDQVDRKHAIKQFSDKNG-LRVLIATSIAARGLDVRGLNLVINYDA 600
Query: 100 PNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASG 145
P+H EDYVHR GRTGRAG G A T + QER +++RA++ SG
Sbjct: 601 PSHMEDYVHRVGRTGRAGATGTAVTLVLSSQEREIRDLVRAMKMSG 646
>sp|Q4PHU9|DBP2_USTMA ATP-dependent RNA helicase DBP2 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP2 PE=3 SV=2
Length = 552
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 88/138 (63%), Gaps = 6/138 (4%)
Query: 24 VDFKNGKVRLLVCA------IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLI 77
+ +NGKV + + K L + G+P L++HG Q +RD + +FK+G+ +++
Sbjct: 372 ISAENGKVIIFTSTKRVADDLTKFLRQDGWPALAIHGDKQQQERDWVLAEFKSGRSPIMV 431
Query: 78 ATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEI 137
AT+VA+RGLDVK ++ V+NYD P + EDYVH+ GRTGRAG G AYT+ T E + A E+
Sbjct: 432 ATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTPENSKSAREL 491
Query: 138 IRALEASGVPIPEDLDKM 155
I L + IP ++++M
Sbjct: 492 IGILREAKQEIPREIEEM 509
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 119 bits (299), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 76/118 (64%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
I ++L G+P LS+HG Q +RD + +F++GK ++ AT VAARGLDVK + V+NY
Sbjct: 360 ITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINY 419
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
D P EDYVHR GRTGRAG KG AYTF T+ R A E+ L+ +G + +L M
Sbjct: 420 DFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPELASM 477
>sp|Q5ADL0|PRP5_CANAL Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=PRP5 PE=3
SV=1
Length = 884
Score = 119 bits (297), Expect = 2e-26, Method: Composition-based stats.
Identities = 57/120 (47%), Positives = 81/120 (67%), Gaps = 2/120 (1%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFK--NGKVRLLIATSVAARGLDVKHLNLVV 95
+V L+ YP +++HGG DQ DR I +F + + +LIATS+AARGLDV++L LV+
Sbjct: 570 LVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINILIATSIAARGLDVRNLGLVI 629
Query: 96 NYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
N+D PNH EDYVHR GRTGRAG KG A TF++ Q + +++AL+ S I L+++
Sbjct: 630 NFDPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKEVFNLVKALKLSHSDIDPKLEEI 689
>sp|A5E058|PRP5_LODEL Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=PRP5 PE=3 SV=1
Length = 994
Score = 117 bits (294), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 82/120 (68%), Gaps = 2/120 (1%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGK--VRLLIATSVAARGLDVKHLNLVV 95
+V L+K PC+++HGG DQ DR I +F + + + +LIATS+AARGLDV++L+LVV
Sbjct: 660 LVSVLLKKAIPCIAIHGGKDQIDRKHAIREFSDDQSGINVLIATSIAARGLDVRNLDLVV 719
Query: 96 NYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
N++ P+H EDYVHR GRTGRAG G A TF+ QE+ +++AL+ S + L ++
Sbjct: 720 NFEPPSHLEDYVHRVGRTGRAGKHGEAITFVDNTQEKEISILVKALKMSSRAVDSKLQEI 779
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 114 bits (284), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 86/146 (58%), Gaps = 4/146 (2%)
Query: 8 LSLHGGIDQYDRDSTIVDFKNGKVRLLVC-AIVKELMKAGYPCLSLHGGIDQYDRDSTIV 66
L H I D+DS I+ F + K C I L + G+P L++HG Q +RD +
Sbjct: 349 LVKHLEIASKDKDSKIIIFASTK---RTCDEITSYLRQDGWPALAIHGDKQQQERDWVLN 405
Query: 67 DFKNGKVRLLIATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFI 126
+F+ G+ +++AT VAARG+DVK +N V+NYD P + EDYVHR GRTGRAG G A +F
Sbjct: 406 EFRTGRSPIMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFF 465
Query: 127 TLEQERHAGEIIRALEASGVPIPEDL 152
T + ++I + + IP+DL
Sbjct: 466 TEANKTLGAQLISIMREAKQEIPQDL 491
>sp|Q6C4D4|DBP2_YARLI ATP-dependent RNA helicase DBP2 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP2 PE=3 SV=1
Length = 552
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 79/118 (66%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
I K L + G+P L++HG Q +RD + +F+ GK +++AT VA+RG+DVK +N V+NY
Sbjct: 379 ITKFLRQDGWPALAIHGDKQQQERDWVLNEFRQGKSPIMVATDVASRGIDVKGINFVINY 438
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
D P++ EDYVHR GRTGRAG KG AYT+ T + + A +++ L + I L++M
Sbjct: 439 DYPSNSEDYVHRIGRTGRAGTKGTAYTYFTEDNRKQARDLLVILREAKQHIDPKLEEM 496
>sp|A4QSS5|DBP2_MAGO7 ATP-dependent RNA helicase DBP2 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DBP2 PE=3 SV=1
Length = 548
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 87/141 (61%), Gaps = 8/141 (5%)
Query: 23 IVDFKNGKVRLLVCA--------IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVR 74
++D K+ K ++L+ I + L + G+P LS+HG Q +RD + FK GK
Sbjct: 367 VMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSP 426
Query: 75 LLIATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHA 134
+++AT VA+RG+DV+++ V+NYD PN+ EDY+HR GRTGRAG KG A TF T E + A
Sbjct: 427 IMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQA 486
Query: 135 GEIIRALEASGVPIPEDLDKM 155
+++ L+ + I L +M
Sbjct: 487 RDLLGVLQEAKQEIDPRLAEM 507
>sp|Q6CIV2|DBP2_KLULA ATP-dependent RNA helicase DBP2 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DBP2 PE=3 SV=1
Length = 554
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 87/146 (59%), Gaps = 4/146 (2%)
Query: 8 LSLHGGIDQYDRDSTIVDFKNGKVRLLVC-AIVKELMKAGYPCLSLHGGIDQYDRDSTIV 66
L+ H D+DS I+ F + K C I L G+P L++HG Q +RD +
Sbjct: 348 LAKHLETASQDQDSKIIIFASTK---RTCDEITSYLRTEGWPALAIHGDKAQNERDWVLA 404
Query: 67 DFKNGKVRLLIATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFI 126
+F++G+ +++AT VAARG+DVK +N V+NYD P + EDYVHR GRTGRAG+ G A +F
Sbjct: 405 EFRSGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFF 464
Query: 127 TLEQERHAGEIIRALEASGVPIPEDL 152
T + +I+ + + IPE+L
Sbjct: 465 TEGNKSLGAALIKIMREAKQDIPEEL 490
>sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP2 PE=3 SV=1
Length = 544
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 4/138 (2%)
Query: 18 DRDSTIVDFKNGKVRLLVC-AIVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLL 76
D++S I+ F + K C I L + G+P L++HG DQ +RD + +F+ G ++
Sbjct: 355 DKESKILIFASTK---RTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIM 411
Query: 77 IATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGE 136
+AT VAARG+DVK +N VVNYD P + EDYVHR GRTGRAG G A +F T + +
Sbjct: 412 VATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGAS 471
Query: 137 IIRALEASGVPIPEDLDK 154
+I + + IPE+L K
Sbjct: 472 LISIMREAKQNIPEELMK 489
>sp|P24783|DBP2_YEAST ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DBP2 PE=1 SV=1
Length = 546
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 77/117 (65%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
I K L + G+P L++HG DQ +RD + +F+NG+ +++AT VAARG+DVK +N V+NY
Sbjct: 376 ITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINY 435
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDK 154
D P + EDYVHR GRTGRAG G A +F T + + ++I + + IP +L K
Sbjct: 436 DMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLK 492
>sp|A6ZRX0|DBP2_YEAS7 ATP-dependent RNA helicase DBP2 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DBP2 PE=3 SV=1
Length = 546
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 77/117 (65%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
I K L + G+P L++HG DQ +RD + +F+NG+ +++AT VAARG+DVK +N V+NY
Sbjct: 376 ITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINY 435
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDK 154
D P + EDYVHR GRTGRAG G A +F T + + ++I + + IP +L K
Sbjct: 436 DMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIPPELLK 492
>sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp.
japonica GN=Os01g0911100 PE=2 SV=2
Length = 666
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 81/136 (59%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
+ ++L G+P LS+HG Q +RD + +FK+GK ++ AT VAARGLDVK + V+N+
Sbjct: 512 VTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCVINF 571
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKMWA 157
D P EDY+HR GRTGRAG G A+TF TL + + +++ L +G + L+ M
Sbjct: 572 DFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAKFSRNLVKILREAGQVVNPALESMAK 631
Query: 158 EDLIVRTFCFRAGNKG 173
+ FR+ +G
Sbjct: 632 SASSMGGGNFRSRGRG 647
>sp|Q7SBC6|DBP2_NEUCR ATP-dependent RNA helicase dbp-2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-2 PE=3 SV=2
Length = 562
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 77/118 (65%)
Query: 38 IVKELMKAGYPCLSLHGGIDQYDRDSTIVDFKNGKVRLLIATSVAARGLDVKHLNLVVNY 97
I + L + G+P LS+HG Q +RD + FK GK +++AT VA+RG+DV+++ V+NY
Sbjct: 397 ITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNY 456
Query: 98 DCPNHYEDYVHRCGRTGRAGNKGFAYTFITLEQERHAGEIIRALEASGVPIPEDLDKM 155
D PN+ EDY+HR GRTGRAG KG A TF T + + A E++ L+ + I L +M
Sbjct: 457 DYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARELVGVLQEAKQQIDPRLAEM 514
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.142 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,093,141
Number of Sequences: 539616
Number of extensions: 4163403
Number of successful extensions: 13864
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 11151
Number of HSP's gapped (non-prelim): 2747
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)