BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17588
(62 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q28FC1|UBE2W_XENTR Ubiquitin-conjugating enzyme E2 W OS=Xenopus tropicalis GN=ube2w
PE=2 SV=1
Length = 151
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
++L EPPPGM ++ + ++ W + M+GA GTLY+GE+FQL FKF +YPFDSP+
Sbjct: 13 LALQNEPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQ 70
>sp|B5DEI4|UBE2W_RAT Ubiquitin-conjugating enzyme E2 W OS=Rattus norvegicus GN=Ube2w
PE=2 SV=1
Length = 151
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
++L +PPPGM ++ + ++ W + M+GA GTLY+GE+FQL FKF +YPFDSP+
Sbjct: 13 LALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQ 70
>sp|Q96B02|UBE2W_HUMAN Ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1
SV=1
Length = 151
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
++L +PPPGM ++ + ++ W + M+GA GTLY+GE+FQL FKF +YPFDSP+
Sbjct: 13 LALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQ 70
>sp|A6H795|UBE2W_BOVIN Ubiquitin-conjugating enzyme E2 W OS=Bos taurus GN=UBE2W PE=2
SV=1
Length = 151
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
++L +PPPGM ++ + ++ W + M+GA GTLY+GE+FQL FKF +YPFDSP+
Sbjct: 13 LALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQ 70
>sp|Q8VDW4|UBE2W_MOUSE Ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=1
SV=1
Length = 151
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
++L +PPPGM ++ + ++ W + M+GA GTLY+GE+FQL FKF +YPFDSP+
Sbjct: 13 LALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQ 70
>sp|Q1JPX4|UB2WB_DANRE Probable ubiquitin-conjugating enzyme E2 W-B OS=Danio rerio
GN=ube2wb PE=2 SV=1
Length = 151
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
++L +PPPGM ++ + + W + M+GA GT+Y+GE+FQL FKF +YPFDSP+
Sbjct: 13 LALQNDPPPGMTLNEKSVQNTITQWIVDMEGASGTVYEGEKFQLLFKFSSRYPFDSPQ 70
>sp|Q4VBH4|UB2WA_DANRE Probable ubiquitin-conjugating enzyme E2 W-A OS=Danio rerio
GN=ube2wa PE=2 SV=2
Length = 151
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
++L +PP GM ++ + + W I M+GA+GT+Y+GE+FQL FKF +YPF+SP+
Sbjct: 13 LALQNDPPAGMTLNERSVQNTITEWFIDMEGAQGTVYEGEKFQLLFKFSSRYPFESPQ 70
>sp|Q55EY8|UBE2W_DICDI Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium
discoideum GN=ube2w PE=3 SV=1
Length = 149
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
+ L PPP + + NL+ W I + G EG++Y GE F+LQFKF YP DSPE
Sbjct: 14 LDLKTNPPPCISITEG---DNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSPE 68
>sp|P42743|UBC15_ARATH Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15
PE=2 SV=2
Length = 161
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 7 PPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
PP G K NL WTI + GA GTLY E +QLQ +F YP ++P+
Sbjct: 31 PPTGFR---HKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQ 79
>sp|O23239|UBC17_ARATH Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis
thaliana GN=UBC17 PE=2 SV=1
Length = 161
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
M PP G + + NL W I + G GTLY E +QLQ +F YP ++P+
Sbjct: 25 MEWQTNPPSGFK---HRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQ 79
>sp|Q9FWT2|UBC16_ARATH Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis
thaliana GN=UBC16 PE=2 SV=1
Length = 161
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 7 PPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
PP G + K NL W I + GA GTLY + +QLQ F YP +SP+
Sbjct: 31 PPTGFK---HKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQ 79
>sp|Q9FMM0|UBC18_ARATH Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis
thaliana GN=UBC18 PE=2 SV=1
Length = 161
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 7 PPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
PP G + + NL W I + GA GTLY E + LQ +F YP ++P+
Sbjct: 31 PPTGFK---HRVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQ 79
>sp|P25869|UBC_ASFM2 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1
Length = 213
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 19 EQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
E NL W + +KG TLY+G F+ + F PKYP++ P T
Sbjct: 27 EDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLT 68
>sp|Q5UQC9|UBC1_MIMIV Probable ubiquitin-conjugating enzyme E2 L460 OS=Acanthamoeba
polyphaga mimivirus GN=UBC PE=3 SV=1
Length = 158
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 18 AEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPEC 59
++N+ LW +++KG E +LY+ F+L+ + YP+ SP+
Sbjct: 32 VDENIFLWKVNIKGPENSLYENYNFELEIELSNDYPYSSPKV 73
>sp|P0C8G4|UBC_ASFP4 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Tick/South Africa/Pretoriuskop Pr4/1996)
GN=UBC PE=2 SV=1
Length = 217
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 19 EQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
E N+ W + +KG TLY+G F+ + F P YP++ P T
Sbjct: 27 ENNMTEWDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLT 68
>sp|P0C8G3|UBC_ASFK5 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1
Length = 218
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 19 EQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
E NL W + +KG T Y+G F+ + F P YP++ P+ T
Sbjct: 27 ENNLTEWDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLT 68
>sp|Q9LJZ5|UBC19_ARATH Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana GN=UBC19
PE=1 SV=1
Length = 181
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
M LM PG + + E N+ W + G++ T+++G E++L F YPF SP+
Sbjct: 46 MGLMMGADPG--ISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPK 101
>sp|P52485|UBCD2_DROME Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster
GN=UbcD2 PE=2 SV=1
Length = 232
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 6 EPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
+PPP + NL W + G G++Y+G F L F P+YPF P+ T
Sbjct: 101 DPPP--NCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVT 153
>sp|P27949|UBC_ASFB7 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1
Length = 215
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 19 EQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
E N+ W + ++G TLY+G F+ + F P+YP+ P+ T
Sbjct: 27 ENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLT 68
>sp|Q9C8X7|UBC31_ARATH Probable ubiquitin-conjugating enzyme E2 31 OS=Arabidopsis
thaliana GN=UBC31 PE=2 SV=1
Length = 154
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 20 QNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62
N+ WT ++G +GT Y+G F L KF YPF P+ T K
Sbjct: 34 NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFK 76
>sp|Q54XS6|UBE2C_DICDI Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium
discoideum GN=ube2c PE=3 SV=1
Length = 153
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSP 57
M+LM P PG+ D N+ W ++GA+ T+Y+ EF++ KF YP+ P
Sbjct: 16 MNLMMGPSPGISAFPDG--DNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPP 70
>sp|Q553F3|UBC2_DICDI Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum
GN=ubc2 PE=3 SV=2
Length = 151
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 3 LMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSP 57
L +PP G + E N+ +W + G + ++++G F+L +F +YP D+P
Sbjct: 16 LQSDPPAG--ISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAP 68
>sp|P0C8G5|UBC_ASFWA Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1
Length = 221
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 19 EQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
E ++ W + ++G TLY+G F+ + F P+YP+ P T
Sbjct: 27 ENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLT 68
>sp|O00103|UBC11_SCHPO Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubc11 PE=3 SV=1
Length = 176
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPEC 59
MSLM PG+ D ++ NL W + G T Y+G +F++ F YP+ P
Sbjct: 38 MSLMMSNTPGISAFPD-SDSNLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTI 95
>sp|Q3UE37|UBE2Z_MOUSE Ubiquitin-conjugating enzyme E2 Z OS=Mus musculus GN=Ube2z PE=1
SV=2
Length = 356
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIH--MKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
MS+ KEPPPGM V D +++ IH + G T Y+G F F+ P YP P
Sbjct: 111 MSIYKEPPPGMFVVPD----TVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPR 166
>sp|Q3B7D1|UBE2Z_RAT Ubiquitin-conjugating enzyme E2 Z OS=Rattus norvegicus GN=Ube2z
PE=2 SV=2
Length = 356
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIH--MKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
MS+ KEPPPGM V D +++ IH + G T Y+G F F+ P YP P
Sbjct: 111 MSIYKEPPPGMFVVPD----TVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPR 166
>sp|Q9H832|UBE2Z_HUMAN Ubiquitin-conjugating enzyme E2 Z OS=Homo sapiens GN=UBE2Z PE=1
SV=2
Length = 354
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIH--MKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
MS+ KEPPPGM V D +++ IH + G T Y+G F F+ P YP P
Sbjct: 109 MSIYKEPPPGMFVVPD----TVDMTKIHALITGPFDTPYEGGFFLFVFRCPPDYPIHPPR 164
>sp|Q02159|UBC7_YEAST Ubiquitin-conjugating enzyme E2 7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC7 PE=1 SV=1
Length = 165
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 3 LMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
L+K+ PPG+ V K+E N+ +W ++G T Y F + +F YP P+ T
Sbjct: 16 LIKDSPPGI-VAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLT 72
>sp|O13685|UBC13_SCHPO Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc13 PE=1 SV=1
Length = 148
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPEC 59
+L ++PPPG + + E NL + I M+G + + Y+G +F L+ +YP P
Sbjct: 13 TLTRDPPPG--IVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMMPPNV 68
>sp|Q91W82|UB2E2_MOUSE Ubiquitin-conjugating enzyme E2 E2 OS=Mus musculus GN=Ube2e2 PE=2
SV=1
Length = 201
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 6 EPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
+PPP + N+ W + G G++Y+G F L F P YPF P+ T
Sbjct: 70 DPPP--NCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVT 122
>sp|Q96LR5|UB2E2_HUMAN Ubiquitin-conjugating enzyme E2 E2 OS=Homo sapiens GN=UBE2E2 PE=1
SV=1
Length = 201
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 6 EPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
+PPP + N+ W + G G++Y+G F L F P YPF P+ T
Sbjct: 70 DPPP--NCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVT 122
>sp|Q7ZY08|UBE2T_XENLA Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2
SV=1
Length = 192
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 3 LMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
L KEPPPG V + E N++ + G G+ Y+G F L+ +YPF+ P+
Sbjct: 14 LNKEPPPG--VICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPK 67
>sp|P52482|UB2E1_MOUSE Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2
SV=1
Length = 193
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 6 EPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
+PPP + N+ W + G G++Y+G F L F P+YPF P+ T
Sbjct: 62 DPPPN--CSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVT 114
>sp|P51965|UB2E1_HUMAN Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1
SV=1
Length = 193
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 6 EPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
+PPP + N+ W + G G++Y+G F L F P+YPF P+ T
Sbjct: 62 DPPPN--CSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVT 114
>sp|Q8L7T3|UBC20_ARATH Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana GN=UBC20
PE=2 SV=1
Length = 180
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 19 EQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
E N+ W + G++ T+++G E++L F YPF P+
Sbjct: 61 EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPK 100
>sp|Q6DG60|UBE2Z_DANRE Ubiquitin-conjugating enzyme E2 Z OS=Danio rerio GN=ube2z PE=2 SV=2
Length = 328
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIH--MKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
MS+ KEPPPGM V D + IH + G T Y+G F F+ P YP P
Sbjct: 81 MSIYKEPPPGMFVVPDPHDMT----KIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPR 136
>sp|Q66KB0|UBE2Z_XENTR Ubiquitin-conjugating enzyme E2 Z OS=Xenopus tropicalis GN=ube2z
PE=2 SV=2
Length = 313
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIH--MKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
MS+ KEPPPGM V D + + IH + G T Y+G F F+ P YP P
Sbjct: 68 MSIYKEPPPGMFVVPDPHD----MTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPR 123
>sp|Q08BH7|UBE2T_DANRE Ubiquitin-conjugating enzyme E2 T OS=Danio rerio GN=ube2t PE=2
SV=1
Length = 194
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 3 LMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
L EPPPG V ++E L+ + G T Y+G F L+ +YPF+ P+
Sbjct: 14 LTAEPPPG--VSCWQSEGRLDELQAQIVGGANTPYEGGVFTLEINIPERYPFEPPK 67
>sp|Q6PCF7|UBE2Z_XENLA Ubiquitin-conjugating enzyme E2 Z OS=Xenopus laevis GN=ube2z PE=2
SV=2
Length = 313
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIH--MKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
MS+ KEPPPGM V D + + IH + G T Y+G F F+ P YP P
Sbjct: 68 MSIYKEPPPGMFVVPDPHD----MTKIHALITGPFDTPYEGGFFLFLFRCPPDYPIHPPR 123
>sp|Q9Z255|UBE2A_MOUSE Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2
SV=1
Length = 152
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 3 LMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSP 57
L ++PP G V +E N+ +W + G EGT ++ F+L +F +YP P
Sbjct: 16 LQEDPPAG--VSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPP 68
>sp|P49459|UBE2A_HUMAN Ubiquitin-conjugating enzyme E2 A OS=Homo sapiens GN=UBE2A PE=1
SV=2
Length = 152
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 3 LMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSP 57
L ++PP G V +E N+ +W + G EGT ++ F+L +F +YP P
Sbjct: 16 LQEDPPAG--VSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPP 68
>sp|Q9D1C1|UBE2C_MOUSE Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2
SV=1
Length = 179
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 21 NLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSP 57
NL W + GA GT+Y+ ++L +F YP+++P
Sbjct: 58 NLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAP 94
>sp|Q32PA5|UBE2C_BOVIN Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2
SV=1
Length = 179
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 21 NLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSP 57
NL W + GA GT+Y+ ++L +F YP+++P
Sbjct: 58 NLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAP 94
>sp|O00762|UBE2C_HUMAN Ubiquitin-conjugating enzyme E2 C OS=Homo sapiens GN=UBE2C PE=1
SV=1
Length = 179
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 21 NLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSP 57
NL W + GA GT+Y+ ++L +F YP+++P
Sbjct: 58 NLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAP 94
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2
PE=1 SV=1
Length = 152
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 3 LMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSP 57
L ++PP G + + N+ LW + G + T +DG F+L +F YP P
Sbjct: 16 LQQDPPAG--ISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPP 68
>sp|Q16763|UBE2S_HUMAN Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1
SV=2
Length = 222
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPE 58
+L +PP G++V + E++L + ++G EGT Y G F+++ G +P P+
Sbjct: 22 TLTADPPDGIKVFPN--EEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPK 76
>sp|Q4R9D1|UBE2C_MACFA Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis GN=UBE2C
PE=2 SV=1
Length = 179
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 21 NLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSP 57
NL W + GA GT+Y+ ++L +F YP+++P
Sbjct: 58 NLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAP 94
>sp|P52483|UB2E3_MOUSE Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1
SV=2
Length = 207
Score = 33.1 bits (74), Expect = 0.49, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 6 EPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
+PPP + N+ W + G G++Y+G F L F YPF P+ T
Sbjct: 76 DPPP--NCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVT 128
>sp|Q969T4|UB2E3_HUMAN Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1
SV=1
Length = 207
Score = 33.1 bits (74), Expect = 0.49, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 6 EPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
+PPP + N+ W + G G++Y+G F L F YPF P+ T
Sbjct: 76 DPPP--NCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVT 128
>sp|Q2T9X7|UB2E3_BOVIN Ubiquitin-conjugating enzyme E2 E3 OS=Bos taurus GN=UBE2E3 PE=2
SV=1
Length = 207
Score = 33.1 bits (74), Expect = 0.49, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 6 EPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60
+PPP + N+ W + G G++Y+G F L F YPF P+ T
Sbjct: 76 DPPP--NCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVT 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,768,163
Number of Sequences: 539616
Number of extensions: 885938
Number of successful extensions: 1217
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 1113
Number of HSP's gapped (non-prelim): 150
length of query: 62
length of database: 191,569,459
effective HSP length: 34
effective length of query: 28
effective length of database: 173,222,515
effective search space: 4850230420
effective search space used: 4850230420
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)