Query psy17588
Match_columns 62
No_of_seqs 116 out of 1065
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 17:28:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17588.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17588hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fo3_A Ubiquitin-conjugating e 99.9 8.6E-24 2.9E-28 118.9 7.4 59 2-62 17-75 (125)
2 2h2y_A Ubiquitin-conjugating e 99.9 2E-23 7E-28 118.9 7.4 59 2-62 31-89 (136)
3 2c2v_B Ubiquitin-conjugating e 99.9 3.6E-23 1.2E-27 119.8 7.4 59 2-62 16-74 (154)
4 1zdn_A Ubiquitin-conjugating e 99.9 4.8E-23 1.7E-27 119.6 7.4 59 2-62 24-82 (158)
5 2ayv_A Ubiquitin-conjugating e 99.9 4.9E-23 1.7E-27 120.6 7.4 59 2-62 32-90 (166)
6 2r0j_A Ubiquitin carrier prote 99.9 3E-23 1E-27 119.5 6.4 59 2-62 12-70 (149)
7 4gpr_A Ubiquitin-conjugating e 99.9 5.2E-23 1.8E-27 118.7 7.3 59 2-62 15-73 (151)
8 2ucz_A UBC7, ubiquitin conjuga 99.9 6.1E-23 2.1E-27 119.7 7.5 60 2-62 15-74 (165)
9 2c4o_A Ubiquitin-conjugating e 99.9 6.9E-23 2.4E-27 119.8 7.7 59 2-62 30-88 (165)
10 2awf_A Ubiquitin-conjugating e 99.9 6.3E-23 2.2E-27 120.6 7.5 60 2-62 28-87 (172)
11 1yh2_A HSPC150 protein similar 99.9 6.7E-23 2.3E-27 120.1 7.3 59 2-62 15-73 (169)
12 1fxt_A Ubiquitin-conjugating e 99.9 4.6E-23 1.6E-27 118.6 6.0 59 2-62 12-71 (149)
13 1z2u_A Ubiquitin-conjugating e 99.9 5.7E-23 1.9E-27 118.4 6.3 59 2-62 15-73 (150)
14 2a7l_A Hypothetical ubiquitin- 99.9 3.1E-23 1.1E-27 118.3 5.2 59 2-62 33-93 (136)
15 1ayz_A UBC2, ubiquitin-conjuga 99.9 5.9E-23 2E-27 120.5 6.3 59 2-62 15-73 (169)
16 2e2c_A Ubiquitin conjugating e 99.9 7.6E-23 2.6E-27 118.5 6.7 59 2-62 20-78 (156)
17 1yrv_A Ubiquitin-conjugating l 99.9 6.2E-23 2.1E-27 120.4 6.3 59 2-62 34-92 (169)
18 3h8k_A Ubiquitin-conjugating e 99.9 1.2E-22 4.1E-27 118.3 7.4 60 2-62 14-73 (164)
19 2f4w_A Ubiquitin-conjugating e 99.9 8E-23 2.8E-27 121.5 6.4 59 2-62 25-83 (187)
20 1jat_A Ubiquitin-conjugating e 99.9 7.5E-23 2.6E-27 118.4 5.9 59 2-62 16-74 (155)
21 2pwq_A Ubiquitin conjugating e 99.9 1.4E-22 4.8E-27 122.7 7.3 59 2-62 34-92 (216)
22 2aak_A UBC1, ubiquitin conjuga 99.9 1E-22 3.4E-27 117.5 6.3 59 2-62 15-73 (152)
23 3rcz_B SUMO-conjugating enzyme 99.9 6.9E-23 2.4E-27 119.6 5.7 61 2-62 21-84 (163)
24 1jat_B Ubiquitin-conjugating e 99.9 2E-22 6.8E-27 114.9 7.5 61 2-62 17-79 (138)
25 2q0v_A Ubiquitin-conjugating e 99.9 3.4E-22 1.2E-26 116.1 8.0 61 2-62 32-94 (156)
26 3bzh_A Ubiquitin-conjugating e 99.9 2.3E-22 7.8E-27 120.2 7.4 59 2-62 59-117 (194)
27 1i7k_A Ubiquitin-conjugating e 99.9 1.1E-22 3.9E-27 120.3 5.3 59 2-62 41-99 (179)
28 3rz3_A Ubiquitin-conjugating e 99.9 3.4E-22 1.2E-26 118.4 7.3 60 2-62 18-77 (183)
29 2a4d_A Ubiquitin-conjugating e 99.9 8.4E-22 2.9E-26 114.9 7.8 60 2-62 36-98 (160)
30 2gjd_A Ubiquitin-conjugating e 99.9 3.5E-22 1.2E-26 115.9 5.3 61 2-62 15-78 (157)
31 2f4z_A Tgtwinscan_2721 - E2 do 99.9 5.2E-22 1.8E-26 118.6 6.0 52 9-62 63-114 (193)
32 2bep_A Ubiquitin-conjugating e 99.9 8.1E-22 2.8E-26 114.5 6.6 54 7-62 27-80 (159)
33 2grr_A Ubiquitin-conjugating e 99.9 5.5E-22 1.9E-26 115.4 5.2 61 2-62 18-81 (161)
34 3k9o_A Ubiquitin-conjugating e 99.8 2.3E-21 7.9E-26 116.0 7.0 54 7-62 24-77 (201)
35 2hlw_A Ubiquitin-conjugating e 99.8 2E-21 6.8E-26 114.2 5.0 60 2-62 46-108 (170)
36 1c4z_D UBCH7, ubiquitin conjug 99.8 1.2E-20 4.2E-25 109.0 8.2 60 1-62 12-71 (154)
37 1wzv_A Ubiquitin-conjugating e 99.8 3E-21 1E-25 111.6 5.4 58 2-62 15-73 (155)
38 3fn1_B NEDD8-conjugating enzym 99.8 6.6E-21 2.2E-25 111.3 6.5 59 2-62 25-83 (167)
39 1tte_A Ubiquitin-conjugating e 99.8 5.4E-22 1.8E-26 120.1 1.4 60 2-62 13-72 (215)
40 2onu_A Ubiquitin-conjugating e 99.8 1.5E-21 5E-26 112.9 3.1 52 9-62 17-68 (152)
41 3e46_A Ubiquitin-conjugating e 99.8 8.9E-21 3E-25 117.0 6.7 54 7-62 76-129 (253)
42 4ddg_A Ubiquitin-conjugating e 99.8 7.3E-21 2.5E-25 122.9 6.2 59 2-62 14-72 (399)
43 1y8x_A Ubiquitin-conjugating e 99.8 2.4E-20 8.2E-25 108.5 7.6 54 6-62 19-73 (160)
44 2y9m_A Ubiquitin-conjugating e 99.8 1.5E-20 5.1E-25 110.4 6.4 51 10-62 36-87 (172)
45 2nvu_C NEDD8-conjugating enzym 99.8 2.5E-20 8.4E-25 110.2 6.7 54 6-62 39-93 (180)
46 4ds2_A Ubiquitin-conjugating e 99.8 1.3E-20 4.4E-25 110.2 4.3 53 8-62 37-91 (167)
47 1yf9_A Ubiquitin carrier prote 99.8 2.7E-19 9.1E-24 105.1 6.4 44 19-62 34-77 (171)
48 3ceg_A Baculoviral IAP repeat- 99.8 2.2E-19 7.4E-24 113.8 6.2 58 3-62 88-149 (323)
49 2z5d_A Ubiquitin-conjugating e 99.8 5E-20 1.7E-24 109.0 2.8 51 9-62 40-90 (179)
50 1zuo_A Hypothetical protein LO 99.8 8.8E-20 3E-24 108.4 2.1 59 2-62 38-111 (186)
51 3o2u_A NEDD8-conjugating enzym 99.8 3E-18 1E-22 102.0 7.4 53 7-62 43-102 (190)
52 2z6o_A UFM1-conjugating enzyme 99.5 4E-15 1.4E-19 87.2 2.1 43 19-61 52-104 (172)
53 3kpa_A Probable ubiquitin fold 99.0 7.2E-11 2.5E-15 68.4 2.5 40 22-61 57-106 (168)
54 3r3q_A Suppressor protein STP2 98.5 1.7E-07 5.7E-12 54.6 5.2 44 19-62 57-103 (162)
55 3obq_A Tumor susceptibility ge 98.0 8.9E-06 3E-10 46.6 5.0 39 19-61 50-90 (146)
56 2ebm_A RWD domain-containing p 96.4 0.0083 2.8E-07 32.7 5.0 22 40-61 55-76 (128)
57 2yz0_A Serine/threonine-protei 96.2 0.027 9.3E-07 31.0 6.3 39 22-61 45-83 (138)
58 2ebk_A RWD domain-containing p 95.6 0.036 1.2E-06 30.1 5.2 39 22-61 39-77 (128)
59 2day_A Ring finger protein 25; 95.3 0.017 5.8E-07 31.4 3.2 22 40-61 59-80 (128)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 95.1 0.016 5.5E-07 31.8 2.7 22 40-61 63-84 (137)
61 2daw_A RWD domain containing p 94.5 0.04 1.4E-06 31.2 3.3 20 41-60 76-95 (154)
62 2dax_A Protein C21ORF6; RWD do 94.4 0.03 1E-06 31.5 2.5 21 41-61 74-94 (152)
63 3zqs_A E3 ubiquitin-protein li 83.1 1.9 6.6E-05 25.3 3.9 37 19-60 22-58 (186)
64 2bum_A Protocatechuate 3,4-dio 74.8 3.9 0.00013 24.3 3.5 25 38-62 109-138 (209)
65 3t63_A 3,4-PCD, protocatechuat 58.1 7.8 0.00027 22.9 2.5 23 40-62 102-129 (200)
66 3t63_M 3,4-PCD, protocatechuat 56.4 7.3 0.00025 23.7 2.2 25 38-62 133-164 (238)
67 2bum_B Protocatechuate 3,4-dio 54.8 8 0.00027 23.5 2.2 25 38-62 134-165 (241)
68 2ccv_A Helix pomatia agglutini 52.7 21 0.0007 18.6 3.4 23 38-61 27-49 (101)
69 2xsu_A Catechol 1,2 dioxygenas 52.4 9.2 0.00032 24.1 2.2 17 38-54 187-203 (312)
70 2azq_A Catechol 1,2-dioxygenas 52.3 9.5 0.00033 24.0 2.3 25 38-62 183-225 (311)
71 1tmx_A Hydroxyquinol 1,2-dioxy 51.5 9.8 0.00033 23.8 2.2 17 38-54 183-199 (293)
72 3n9t_A PNPC; phospholipid bind 51.2 10 0.00034 23.7 2.2 25 38-62 180-222 (290)
73 3th1_A Chlorocatechol 1,2-diox 49.8 15 0.00051 22.6 2.8 17 38-54 150-166 (260)
74 2boy_A 3-chlorocatechol 1,2-di 49.0 11 0.00039 23.0 2.2 17 38-54 153-169 (254)
75 1dmh_A 1,2-CTD, catechol 1,2-d 47.7 12 0.0004 23.6 2.2 25 38-62 186-228 (311)
76 3hhy_A 1,2-CTD, catechol 1,2-d 45.9 12 0.0004 23.3 1.9 16 39-54 183-198 (280)
77 3o5u_A Chlorocatechol 1,2-diox 41.0 21 0.00071 21.9 2.5 17 38-54 155-171 (257)
78 3kxt_A Chromatin protein CREN7 36.1 26 0.00089 16.6 1.9 11 44-54 46-56 (56)
79 2rp4_A Transcription factor P5 35.9 24 0.00082 17.7 1.8 24 20-50 7-30 (76)
80 4b0y_A Heme-binding protein 2; 29.5 40 0.0014 20.1 2.4 27 32-58 117-143 (227)
81 2vm9_A Discoidin-2, discoidin 28.1 99 0.0034 18.4 5.3 33 27-60 167-202 (257)
82 2k6w_A Putative uncharacterize 27.6 76 0.0026 16.9 3.5 26 25-50 82-107 (120)
83 2kmc_A Fermitin family homolog 22.7 68 0.0023 17.0 2.3 26 33-58 9-34 (102)
84 4guc_A Protein BA_2500; virule 22.6 68 0.0023 17.5 2.3 32 21-52 79-110 (120)
85 1x9l_A CUI-DR1885; copper bind 21.8 85 0.0029 17.4 2.7 27 25-51 107-133 (149)
86 1f53_A Yeast killer toxin-like 21.6 27 0.00091 17.8 0.5 10 51-60 70-79 (84)
No 1
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.90 E-value=8.6e-24 Score=118.92 Aligned_cols=59 Identities=25% Similarity=0.605 Sum_probs=55.6
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
++++++++||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 17 ~l~~~~~~~~~~~~~--~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~ 75 (125)
T 2fo3_A 17 NFLNNPPINCTLDVH--PNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFL 75 (125)
T ss_dssp HHHHSCCTTEEEEEC--TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred HHHhCCCCCEEEEeC--cchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEe
Confidence 466788999999987 88999999999999999999999999999999999999999994
No 2
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.89 E-value=2e-23 Score=118.87 Aligned_cols=59 Identities=25% Similarity=0.621 Sum_probs=55.6
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|+++++.||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 31 ~l~~~~~~~~~~~~~--~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~ 89 (136)
T 2h2y_A 31 NFLKNPPINCTIDVH--PSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFL 89 (136)
T ss_dssp HHHHSCCTTEEEEEC--TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred HHHhCCCCCeEEEec--cccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEe
Confidence 466788999999987 88999999999999999999999999999999999999999994
No 3
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=99.89 E-value=3.6e-23 Score=119.76 Aligned_cols=59 Identities=25% Similarity=0.631 Sum_probs=55.8
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 16 ~l~~~~~~~i~~~~~--~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 74 (154)
T 2c2v_B 16 RLLAEPVPGIKAEPD--ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFM 74 (154)
T ss_dssp HHHHSCCTTEEEEEC--SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC
T ss_pred HHHhCCCCCEEEEEC--CCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEee
Confidence 466789999999998 88999999999999999999999999999999999999999995
No 4
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=99.89 E-value=4.8e-23 Score=119.60 Aligned_cols=59 Identities=29% Similarity=0.606 Sum_probs=55.8
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 24 ~l~~~~~~gi~~~~~--~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 82 (158)
T 1zdn_A 24 TLTADPPDGIKVFPN--EEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFL 82 (158)
T ss_dssp HHHHSCCTTEEEEEC--SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHhCCCCCEEEEEC--CCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEec
Confidence 466789999999997 88999999999999999999999999999999999999999994
No 5
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.89 E-value=4.9e-23 Score=120.57 Aligned_cols=59 Identities=27% Similarity=0.590 Sum_probs=55.8
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 32 ~l~~~~~~gi~~~~~--~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 90 (166)
T 2ayv_A 32 DLSKDPPTNCSAGPV--GDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFT 90 (166)
T ss_dssp HHHHSCCTTEEEEEC--SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC
T ss_pred HHHhCCCCCEEEEEc--CCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeec
Confidence 466789999999997 88999999999999999999999999999999999999999995
No 6
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.89 E-value=3e-23 Score=119.51 Aligned_cols=59 Identities=29% Similarity=0.647 Sum_probs=55.8
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 12 ~l~~~~~~~i~~~~~--~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 70 (149)
T 2r0j_A 12 NLANEPPPGIMAVPV--PENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFL 70 (149)
T ss_dssp HHHHSCCTTEEEEEE--TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred HHHhCCCCCEEEEEC--CCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEec
Confidence 466789999999998 88999999999999999999999999999999999999999994
No 7
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=99.89 E-value=5.2e-23 Score=118.69 Aligned_cols=59 Identities=25% Similarity=0.557 Sum_probs=55.9
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|+++++.||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 15 ~l~~~~~~~i~~~p~--~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 73 (151)
T 4gpr_A 15 EIQQDPPCNCSAGPV--GDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFM 73 (151)
T ss_dssp HHHHSCCTTEEEEES--SSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred HHHhCCCCCEEEEEc--CCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEe
Confidence 467789999999998 78999999999999999999999999999999999999999994
No 8
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.88 E-value=6.1e-23 Score=119.74 Aligned_cols=60 Identities=28% Similarity=0.647 Sum_probs=55.5
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. +++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 15 ~l~~~~~~gi~~~~~-~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~ 74 (165)
T 2ucz_A 15 QLIKDSPPGIVAGPK-SENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFT 74 (165)
T ss_dssp HHHHSCCTTEEEEES-SSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHhCCCCCEEEEEC-CCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEe
Confidence 466789999999987 257999999999999999999999999999999999999999994
No 9
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=99.88 E-value=6.9e-23 Score=119.77 Aligned_cols=59 Identities=24% Similarity=0.567 Sum_probs=55.8
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|+++++.||++.+. ++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 30 ~l~~~~~~gi~~~p~--~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~ 88 (165)
T 2c4o_A 30 DLARDPPAQCSAGPV--GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFT 88 (165)
T ss_dssp HHHSSCCTTEEEEES--SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC
T ss_pred HHHhCCCCCEEEEEc--CCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEe
Confidence 467789999999998 78999999999999999999999999999999999999999994
No 10
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.88 E-value=6.3e-23 Score=120.58 Aligned_cols=60 Identities=27% Similarity=0.550 Sum_probs=55.7
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. +++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 28 ~l~~~~~~gi~~~p~-~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~ 87 (172)
T 2awf_A 28 ELNKNPVEGFSAGLI-DDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFI 87 (172)
T ss_dssp HHHHSCCTTEEEEES-STTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC
T ss_pred HHHhCCCCCEEEEEC-CCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCccccc
Confidence 567789999999987 257999999999999999999999999999999999999999995
No 11
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.88 E-value=6.7e-23 Score=120.12 Aligned_cols=59 Identities=27% Similarity=0.549 Sum_probs=55.8
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 15 ~l~~~~~~gi~~~~~--~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~ 73 (169)
T 1yh2_A 15 MLATEPPPGITCWQD--KDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFL 73 (169)
T ss_dssp HHHHSCCTTEEEEES--SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred HHHhCCCCCEEEEeC--CCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEee
Confidence 466789999999997 88999999999999999999999999999999999999999994
No 12
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.88 E-value=4.6e-23 Score=118.64 Aligned_cols=59 Identities=19% Similarity=0.452 Sum_probs=55.0
Q ss_pred CcccCCCCCeEEeecCCCC-CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQ-NLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~-~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 12 ~l~~~~~~~i~~~~~--~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 71 (149)
T 1fxt_A 12 AVKDDPAAHITLEFV--SESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFD 71 (149)
T ss_dssp HHHHCGGGCCEEEES--SSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEES
T ss_pred HHHhCCCCCEEEEEC--CCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEe
Confidence 466788999999997 55 999999999999999999999999999999999999999994
No 13
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=99.88 E-value=5.7e-23 Score=118.37 Aligned_cols=59 Identities=25% Similarity=0.545 Sum_probs=55.7
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 15 ~l~~~~~~~~~~~~~--~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 73 (150)
T 1z2u_A 15 DLGRDPPAQCSAGPV--GDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFT 73 (150)
T ss_dssp HHHHSCCSSEEEEEE--TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred HHHhCCCCCEEEEEC--CCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEe
Confidence 466789999999998 78999999999999999999999999999999999999999994
No 14
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.88 E-value=3.1e-23 Score=118.25 Aligned_cols=59 Identities=49% Similarity=1.034 Sum_probs=54.2
Q ss_pred CcccCCCCCeEEe--ecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVD--SDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~--~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++. +. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 33 ~l~~~~~~gi~v~~~~~--~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 93 (136)
T 2a7l_A 33 ALQNDPPPGMTLNEKSV--QNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFT 93 (136)
T ss_dssp HHHHSCCTTCCCCTTCC--CCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEE
T ss_pred HHHhCCCCCEEEEEeeC--ccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEe
Confidence 4667899999865 65 88999999999999999999999999999999999999999994
No 15
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.88 E-value=5.9e-23 Score=120.47 Aligned_cols=59 Identities=24% Similarity=0.562 Sum_probs=55.8
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||+|+|+|.||++||++||+|+|.
T Consensus 15 ~l~~~~~~gi~~~p~--~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~ 73 (169)
T 1ayz_A 15 RMKEDAPPGVSASPL--PDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFL 73 (169)
T ss_dssp HHHHSCCTTEEEEEE--TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHhCCCCCEEEEec--CCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccc
Confidence 466789999999998 88999999999999999999999999999999999999999994
No 16
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=99.88 E-value=7.6e-23 Score=118.51 Aligned_cols=59 Identities=25% Similarity=0.606 Sum_probs=55.2
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 20 ~l~~~~~~~i~~~p~--~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (156)
T 2e2c_A 20 TLLMSGDPGITAFPD--GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFT 78 (156)
T ss_dssp HHHHHCCTTEEEEES--SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred HHHhCCCCCEEEEEC--CCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEe
Confidence 456778999999997 88999999999999999999999999999999999999999994
No 17
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.88 E-value=6.2e-23 Score=120.44 Aligned_cols=59 Identities=19% Similarity=0.475 Sum_probs=55.6
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 34 ~l~~~~~~gi~~~p~--~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 92 (169)
T 1yrv_A 34 DLKENNYKGITAKPV--SEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFI 92 (169)
T ss_dssp HHHHHCCTTEEEEEC--STTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEES
T ss_pred HHHhCCCCCEEEEEc--CCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceec
Confidence 466788999999998 88999999999999999999999999999999999999999995
No 18
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=99.88 E-value=1.2e-22 Score=118.34 Aligned_cols=60 Identities=25% Similarity=0.462 Sum_probs=55.3
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|+++++.||++.+. +++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 14 ~l~~~~~~gi~~~~~-~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 73 (164)
T 3h8k_A 14 QLTLNPPEGIVAGPM-NEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFT 73 (164)
T ss_dssp HHHHSCCTTEEEEES-STTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC
T ss_pred HHHhCCCCCEEEEEC-CCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEc
Confidence 467789999999987 245999999999999999999999999999999999999999995
No 19
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.88 E-value=8e-23 Score=121.50 Aligned_cols=59 Identities=24% Similarity=0.469 Sum_probs=55.8
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 25 ~l~~~~~~~i~~~p~--~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~ 83 (187)
T 2f4w_A 25 RIKKDPVPYICAEPL--PSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMI 83 (187)
T ss_dssp HHHHSCCTTEEEEEE--TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEEC
T ss_pred HHHhCCCCCEEEEEc--CCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCccccc
Confidence 466789999999998 88999999999999999999999999999999999999999994
No 20
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.88 E-value=7.5e-23 Score=118.44 Aligned_cols=59 Identities=24% Similarity=0.625 Sum_probs=55.7
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 16 ~l~~~~~~~i~~~~~--~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 74 (155)
T 1jat_A 16 KLVSDPVPGITAEPH--DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFL 74 (155)
T ss_dssp HHHHSCCTTEEEEEE--TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEEC
T ss_pred HHHhCCCCCEEEEEC--CCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceee
Confidence 466789999999998 78999999999999999999999999999999999999999995
No 21
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.88 E-value=1.4e-22 Score=122.70 Aligned_cols=59 Identities=25% Similarity=0.539 Sum_probs=55.8
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 34 ~l~~~~~~gi~~~p~--~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~ 92 (216)
T 2pwq_A 34 DIENENVQEIDAHIK--DSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFV 92 (216)
T ss_dssp HHHHSCTTTEEEEEC--SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred HHHhCCCCCEEEEEc--CCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCccccc
Confidence 467789999999998 88999999999999999999999999999999999999999994
No 22
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=99.88 E-value=1e-22 Score=117.54 Aligned_cols=59 Identities=29% Similarity=0.655 Sum_probs=55.6
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 15 ~l~~~~~~~i~~~~~--~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 73 (152)
T 2aak_A 15 RLQQDPPAGISGAPQ--DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFV 73 (152)
T ss_dssp HHHHSCCTTEEEEEE--TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHhCCCCCEEEEeC--CCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEe
Confidence 466788999999998 88999999999999999999999999999999999999999994
No 23
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.88 E-value=6.9e-23 Score=119.64 Aligned_cols=61 Identities=23% Similarity=0.528 Sum_probs=55.2
Q ss_pred CcccCCCCCeEEeecCCCC---CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQ---NLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~---~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+.+++| |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 21 ~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~ 84 (163)
T 3rcz_B 21 QWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFT 84 (163)
T ss_dssp HHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEe
Confidence 5778999999999872122 899999999999999999999999999999999999999995
No 24
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.88 E-value=2e-22 Score=114.90 Aligned_cols=61 Identities=18% Similarity=0.315 Sum_probs=51.0
Q ss_pred CcccC-CCCCeEEeecCCC-CCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKE-PPPGMEVDSDKAE-QNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~-~~~~i~~~~~~~~-~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|+++ ++.||++.+.+++ .|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 17 ~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 79 (138)
T 1jat_B 17 KGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFI 79 (138)
T ss_dssp HHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEE
Confidence 45666 7889999985212 2599999999999999999999999999999999999999994
No 25
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.87 E-value=3.4e-22 Score=116.08 Aligned_cols=61 Identities=20% Similarity=0.378 Sum_probs=53.4
Q ss_pred CcccC-CCCCeEEeecCC-CCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKE-PPPGMEVDSDKA-EQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~-~~~~i~~~~~~~-~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|+++ +++||++.+.++ +.|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 32 ~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 94 (156)
T 2q0v_A 32 RGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFD 94 (156)
T ss_dssp HHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEE
Confidence 45666 788999998621 22699999999999999999999999999999999999999994
No 26
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.87 E-value=2.3e-22 Score=120.16 Aligned_cols=59 Identities=31% Similarity=0.743 Sum_probs=55.7
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||+|+|+|.||++||++||+|+|.
T Consensus 59 ~l~~~~~~gi~~~p~--~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 117 (194)
T 3bzh_A 59 DITLDPPPNCSAGPK--GDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFR 117 (194)
T ss_dssp HHHHSCCTTEEEEES--SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHhCCCCCceeecc--cCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCcccccc
Confidence 466789999999998 88999999999999999999999999999999999999999994
No 27
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.87 E-value=1.1e-22 Score=120.27 Aligned_cols=59 Identities=27% Similarity=0.581 Sum_probs=55.3
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||+|+|+|.||++||++||+|+|.
T Consensus 41 ~l~~~~~~gi~~~p~--~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 99 (179)
T 1i7k_A 41 TLMMSGDKGISAFPE--SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFL 99 (179)
T ss_dssp HHHHHCCTTEEEEEE--TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHhCCCCCEEEEEc--CCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEe
Confidence 456778999999997 88999999999999999999999999999999999999999994
No 28
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.87 E-value=3.4e-22 Score=118.37 Aligned_cols=60 Identities=30% Similarity=0.573 Sum_probs=55.3
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. +++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 18 ~l~~~~~~gi~~~~~-~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 77 (183)
T 3rz3_A 18 GLQEEPVEGFRVTLV-DEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFL 77 (183)
T ss_dssp HHHHSCCTTEEEEEC-TTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred HHHhCCCCCEEEEec-CccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEec
Confidence 567889999999943 388999999999999999999999999999999999999999994
No 29
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.86 E-value=8.4e-22 Score=114.90 Aligned_cols=60 Identities=25% Similarity=0.437 Sum_probs=52.9
Q ss_pred CcccCCCCC-eEEeecCCCCC--cccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPG-MEVDSDKAEQN--LNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~-i~~~~~~~~~~--l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++| |++.+. +++| +++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 36 ~l~~~~~~g~~~~~~~-~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 98 (160)
T 2a4d_A 36 EGQKGVGDGTVSWGLE-DDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFV 98 (160)
T ss_dssp HHHSCCTTSSEEEEES-STTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHhCCCCCcEEEEec-CCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEe
Confidence 466788888 788874 2444 99999999999999999999999999999999999999995
No 30
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.86 E-value=3.5e-22 Score=115.85 Aligned_cols=61 Identities=23% Similarity=0.468 Sum_probs=54.7
Q ss_pred CcccCCCCCeEEeecCC---CCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKA---EQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~---~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+.++ ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 15 ~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (157)
T 2gjd_A 15 KWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFP 78 (157)
T ss_dssp HHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECC
T ss_pred HHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeecc
Confidence 46788999999998621 14899999999999999999999999999999999999999994
No 31
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.86 E-value=5.2e-22 Score=118.56 Aligned_cols=52 Identities=25% Similarity=0.576 Sum_probs=49.4
Q ss_pred CCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 9 PGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 9 ~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
.||++.+. ++|+++|+++|.||++|+|+||+|+|+|.||++||++||+|+|.
T Consensus 63 ~gi~v~~~--~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 114 (193)
T 2f4z_A 63 HGVSAQIV--GGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFV 114 (193)
T ss_dssp -CEEEEEE--TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred CcEEEEEc--CCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEe
Confidence 79999998 78999999999999999999999999999999999999999994
No 32
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.86 E-value=8.1e-22 Score=114.47 Aligned_cols=54 Identities=26% Similarity=0.482 Sum_probs=51.6
Q ss_pred CCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 7 PPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 7 ~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
++.||++.+. ++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 27 ~~~~i~~~~~--~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 80 (159)
T 2bep_A 27 SKNQIKVDLV--DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI 80 (159)
T ss_dssp HTTSEEEEEC--SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred CCCCEEEEeC--CCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEee
Confidence 5789999998 78999999999999999999999999999999999999999995
No 33
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.85 E-value=5.5e-22 Score=115.42 Aligned_cols=61 Identities=30% Similarity=0.577 Sum_probs=54.7
Q ss_pred CcccCCCCCeEEeecC---CCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDK---AEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~---~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||.+.+.. +++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 18 ~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 81 (161)
T 2grr_A 18 AWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE 81 (161)
T ss_dssp HHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred HHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe
Confidence 4677899999998751 136899999999999999999999999999999999999999994
No 34
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.85 E-value=2.3e-21 Score=116.03 Aligned_cols=54 Identities=26% Similarity=0.482 Sum_probs=51.4
Q ss_pred CCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 7 PPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 7 ~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
++.||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 24 ~~~~i~~~~~--~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 77 (201)
T 3k9o_A 24 SKNQIKVDLV--DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI 77 (201)
T ss_dssp HTTSEEEEEC--STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred CCCCEEEEEC--CCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccc
Confidence 3689999998 88999999999999999999999999999999999999999995
No 35
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.84 E-value=2e-21 Score=114.16 Aligned_cols=60 Identities=25% Similarity=0.428 Sum_probs=52.4
Q ss_pred CcccCCCCC-eEEeecCCCC--CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPG-MEVDSDKAEQ--NLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~-i~~~~~~~~~--~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++| +++.+. +++ |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 46 ~l~~~~~~g~~~~~~~-~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 108 (170)
T 2hlw_A 46 EGQKGVGDGTVSWGLE-DDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFV 108 (170)
T ss_dssp HHHHCCGGGCEEEEES-STTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEEC
T ss_pred HHHhCCCCCcEEEEec-CcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEe
Confidence 456777888 778774 244 499999999999999999999999999999999999999995
No 36
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.84 E-value=1.2e-20 Score=108.95 Aligned_cols=60 Identities=25% Similarity=0.394 Sum_probs=54.3
Q ss_pred CCcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 1 MSLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 1 ~~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
++|++++++|+.+.+. +++|+++|+++|. |++|+|+||.|+++|.||++||++||+|+|.
T Consensus 12 ~~l~~~~~~~~~~~~~-~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 71 (154)
T 1c4z_D 12 EEIRKCGMKNFRNIQV-DEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFK 71 (154)
T ss_dssp TTCSSSCCSSCEEECS-SCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEES
T ss_pred HHHHhCCCCCEEEeeC-CCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEe
Confidence 4678889999987654 3789999999998 9999999999999999999999999999994
No 37
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.84 E-value=3e-21 Score=111.62 Aligned_cols=58 Identities=31% Similarity=0.643 Sum_probs=53.9
Q ss_pred CcccCCCCCeEE-eecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEV-DSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~-~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||.+ .+. ++|+++|+++|. |++|+|+||.|+++|.||++||++||+|+|.
T Consensus 15 ~l~~~~~~~i~~~~~~--~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 73 (155)
T 1wzv_A 15 DLQKKPPPYLRNLSSD--DANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFT 73 (155)
T ss_dssp HHHHSCCTTEEEEEEC--SSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEES
T ss_pred HHHhCCCCCEEEEecC--CCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceee
Confidence 467789999999 666 889999999999 9999999999999999999999999999994
No 38
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.83 E-value=6.6e-21 Score=111.29 Aligned_cols=59 Identities=17% Similarity=0.295 Sum_probs=54.0
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. +++|++.|+++| ||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 25 ~l~~~~~~gi~~~~~-~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 83 (167)
T 3fn1_B 25 ELEANLPCTCKVHFP-DPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCL 83 (167)
T ss_dssp HHGGGSCTTEEEECS-SSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEEC
T ss_pred HHHhCCCCCEEEEeC-CCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEec
Confidence 567889999999965 367899999998 89999999999999999999999999999995
No 39
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.83 E-value=5.4e-22 Score=120.09 Aligned_cols=60 Identities=20% Similarity=0.461 Sum_probs=54.3
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. +++++++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 13 ~l~~~~~~gi~~~p~-~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~ 72 (215)
T 1tte_A 13 AVKDDPAAHITLEFV-SESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFD 72 (215)
T ss_dssp HHHTTTCTTCEECCC-SSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEET
T ss_pred HHHhCCCCCEEEEEC-CCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCccccc
Confidence 467789999999997 234677999999999999999999999999999999999999994
No 40
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.83 E-value=1.5e-21 Score=112.87 Aligned_cols=52 Identities=21% Similarity=0.519 Sum_probs=49.1
Q ss_pred CCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 9 PGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 9 ~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
.|+++.+. ++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 17 ~~~~v~~~--~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 68 (152)
T 2onu_A 17 AGYDLELN--NGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFM 68 (152)
T ss_dssp HTCCEEEE--TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred CCCEEEEc--cCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEe
Confidence 47888887 88999999999999999999999999999999999999999994
No 41
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.83 E-value=8.9e-21 Score=117.01 Aligned_cols=54 Identities=26% Similarity=0.482 Sum_probs=51.5
Q ss_pred CCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 7 PPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 7 ~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
++.||++.+. ++|+++|+++|.||++|+|+||.|+|+|.||++||++||+|+|.
T Consensus 76 ~~~gi~v~p~--~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~ 129 (253)
T 3e46_A 76 SKNQIKVDLV--DENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFI 129 (253)
T ss_dssp HTTSEEEEEC--STTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred CCCCEEEEEC--CCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeec
Confidence 4789999998 88999999999999999999999999999999999999999994
No 42
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.83 E-value=7.3e-21 Score=122.89 Aligned_cols=59 Identities=24% Similarity=0.567 Sum_probs=56.1
Q ss_pred CcccCCCCCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEPPPGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++++||++.+. ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 14 ~l~~~~~~~~~~~p~--~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~ 72 (399)
T 4ddg_A 14 DLARDPPAQCSAGPV--GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFT 72 (399)
T ss_dssp HHHHSCCSSEEEEEE--TTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEES
T ss_pred HHHhCCCCCEEEEEc--CCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEee
Confidence 567889999999998 88999999999999999999999999999999999999999994
No 43
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.83 E-value=2.4e-20 Score=108.51 Aligned_cols=54 Identities=24% Similarity=0.529 Sum_probs=50.4
Q ss_pred CCCCCeEEe-ecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 6 EPPPGMEVD-SDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 6 ~~~~~i~~~-~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
++++||++. +. ++|+++|+++| ||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 19 ~~~~~~~~~~~~--~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 73 (160)
T 1y8x_A 19 NLPKTCDISFSD--PDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCE 73 (160)
T ss_dssp CCCTTEEEECSS--TTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCCeEEEecc--CCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEe
Confidence 578899998 65 88999999988 99999999999999999999999999999995
No 44
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.82 E-value=1.5e-20 Score=110.42 Aligned_cols=51 Identities=22% Similarity=0.527 Sum_probs=47.7
Q ss_pred CeEEee-cCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 10 GMEVDS-DKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 10 ~i~~~~-~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
++.+.+ . ++|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 36 ~~~~~p~~--~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 87 (172)
T 2y9m_A 36 IESLNPID--ETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFM 87 (172)
T ss_dssp EEEEEESS--TTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred eEEEecCC--CCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEe
Confidence 467777 5 88999999999999999999999999999999999999999995
No 45
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.82 E-value=2.5e-20 Score=110.25 Aligned_cols=54 Identities=24% Similarity=0.529 Sum_probs=50.4
Q ss_pred CCCCCeEEe-ecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 6 EPPPGMEVD-SDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 6 ~~~~~i~~~-~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
++++||++. +. ++|+++|+++| ||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 39 ~~~~~i~~~~p~--~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~ 93 (180)
T 2nvu_C 39 NLPKTCDISFSD--PDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCE 93 (180)
T ss_dssp CCCTTEEEECSS--TTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCCeEEEecc--cccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCcee
Confidence 578899998 65 88999999998 99999999999999999999999999999994
No 46
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.81 E-value=1.3e-20 Score=110.19 Aligned_cols=53 Identities=21% Similarity=0.491 Sum_probs=50.7
Q ss_pred CCCeEEeecCCCCCcccEEEEEECCCCCCCC--CCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 8 PPGMEVDSDKAEQNLNLWTIHMKGAEGTLYD--GEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 8 ~~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~--gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+.+|.+.+. ++|+++|+++|.||++|+|+ ||.|+++|.||++||++||+|+|.
T Consensus 37 ~~~i~~~~~--~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~ 91 (167)
T 4ds2_A 37 HSTAIFSVD--TDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFV 91 (167)
T ss_dssp SSCEEEEEE--ESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEES
T ss_pred CCcEEEEeC--CCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEe
Confidence 678999987 89999999999999999999 999999999999999999999994
No 47
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.78 E-value=2.7e-19 Score=105.12 Aligned_cols=44 Identities=27% Similarity=0.539 Sum_probs=42.7
Q ss_pred CCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 19 EQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 19 ~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
++|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 34 ~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~ 77 (171)
T 1yf9_A 34 SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFC 77 (171)
T ss_dssp CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred CCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEee
Confidence 78999999999999999999999999999999999999999994
No 48
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.78 E-value=2.2e-19 Score=113.83 Aligned_cols=58 Identities=24% Similarity=0.426 Sum_probs=51.2
Q ss_pred cccCCCCC----eEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 3 LMKEPPPG----MEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 3 l~~~~~~~----i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
|++++++| +.+.+. ++|++.|+++|.||++|+|+||+|+|+|.||++||++||+|+|.
T Consensus 88 L~k~~p~g~~~~i~v~~~--ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 88 LSTSLPLSSSSSVFVRCD--EERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp HHHHCCCCSSCCEEEEEE--SSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred HHhCCCCCcccceeeccc--CCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 45566664 556666 88999999999999999999999999999999999999999994
No 49
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.78 E-value=5e-20 Score=108.98 Aligned_cols=51 Identities=29% Similarity=0.511 Sum_probs=47.1
Q ss_pred CCeEEeecCCCCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 9 PGMEVDSDKAEQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 9 ~~i~~~~~~~~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
.||++.+. +|+++|+++|.||++|+|+||+|+++|.||++||++||+|+|.
T Consensus 40 ~g~~v~~~---ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~ 90 (179)
T 2z5d_A 40 SKHEVTIL---GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFM 90 (179)
T ss_dssp SSSCEEEE---EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred CCCEEEEC---CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEe
Confidence 57888875 4689999999999999999999999999999999999999994
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.77 E-value=8.8e-20 Score=108.37 Aligned_cols=59 Identities=19% Similarity=0.367 Sum_probs=53.1
Q ss_pred CcccCC---CCCeEEeecCCCCCcccEEEEEECC-CCCCCCC-----------CEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 2 SLMKEP---PPGMEVDSDKAEQNLNLWTIHMKGA-EGTLYDG-----------EEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 2 ~l~~~~---~~~i~~~~~~~~~~l~~w~~~i~gp-~~t~y~g-----------g~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|++++ +.+|++.+. ++|+++|+++|.|| ++|+|+| |.|+|+|.||++||++||+|+|.
T Consensus 38 ~l~~~~~~~~~~~~~~p~--~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~ 111 (186)
T 1zuo_A 38 DIYRSQSYKTGIYSVELI--NDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVV 111 (186)
T ss_dssp HHHTSHHHHTTSEEEEEE--TTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEE
T ss_pred HHHhCCCCCCCcEEEEEc--CCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEe
Confidence 355666 688999998 78999999999998 8999998 89999999999999999999983
No 51
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.75 E-value=3e-18 Score=102.00 Aligned_cols=53 Identities=15% Similarity=0.426 Sum_probs=48.9
Q ss_pred CCCCeEEe----ecCCCCCcc---cEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEeC
Q psy17588 7 PPPGMEVD----SDKAEQNLN---LWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 7 ~~~~i~~~----~~~~~~~l~---~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+++||++. +. ++|++ +|+++|. |++|+|+||.|+++|.||++||++||+|+|.
T Consensus 43 ~~~~i~~~~~~~p~--~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 102 (190)
T 3o2u_A 43 LPPTVTLNVITSPD--SADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCL 102 (190)
T ss_dssp CCTTEEEEEEECTT--CCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCEEEEecCCCC--CccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEe
Confidence 67899998 65 88999 9999997 7789999999999999999999999999995
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.51 E-value=4e-15 Score=87.18 Aligned_cols=43 Identities=30% Similarity=0.503 Sum_probs=41.6
Q ss_pred CCCcccEEEEEECCCCCCCCCC----------EEEEEEEcCCCCCCCCCeEEe
Q psy17588 19 EQNLNLWTIHMKGAEGTLYDGE----------EFQLQFKFGPKYPFDSPECTK 61 (62)
Q Consensus 19 ~~~l~~w~~~i~gp~~t~y~gg----------~f~~~i~~~~~yP~~pP~v~F 61 (62)
.+|++.|.+++.||++|+|+|| .|+|+|.||++||.+||+|+|
T Consensus 52 k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F 104 (172)
T 2z6o_A 52 KNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAV 104 (172)
T ss_dssp HHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred ccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeee
Confidence 5789999999999999999999 999999999999999999998
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.05 E-value=7.2e-11 Score=68.37 Aligned_cols=40 Identities=28% Similarity=0.506 Sum_probs=37.9
Q ss_pred cccEEEEEECCCCCCCCCC----------EEEEEEEcCCCCCCCCCeEEe
Q psy17588 22 LNLWTIHMKGAEGTLYDGE----------EFQLQFKFGPKYPFDSPECTK 61 (62)
Q Consensus 22 l~~w~~~i~gp~~t~y~gg----------~f~~~i~~~~~yP~~pP~v~F 61 (62)
=..|...+.||++|.|.|+ .|++++.||.+||.+||+|+|
T Consensus 57 d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~F 106 (168)
T 3kpa_A 57 DSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIAL 106 (168)
T ss_dssp TCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBC
T ss_pred cCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeec
Confidence 3579999999999999999 999999999999999999998
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=98.53 E-value=1.7e-07 Score=54.63 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=35.0
Q ss_pred CCCcccEEEEEECCCCCCCCCCE---EEEEEEcCCCCCCCCCeEEeC
Q psy17588 19 EQNLNLWTIHMKGAEGTLYDGEE---FQLQFKFGPKYPFDSPECTKK 62 (62)
Q Consensus 19 ~~~l~~w~~~i~gp~~t~y~gg~---f~~~i~~~~~yP~~pP~v~F~ 62 (62)
+|....+-+.+.|.-..+|+|++ |.+.|.||.+||++||.|.|.
T Consensus 57 ~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~ 103 (162)
T 3r3q_A 57 SDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISIN 103 (162)
T ss_dssp TTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEE
Confidence 45555555566666568999999 889999999999999999773
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=98.05 E-value=8.9e-06 Score=46.60 Aligned_cols=39 Identities=21% Similarity=0.430 Sum_probs=34.2
Q ss_pred CCCcccEEEEEECCCCCCCCCCEEEE--EEEcCCCCCCCCCeEEe
Q psy17588 19 EQNLNLWTIHMKGAEGTLYDGEEFQL--QFKFGPKYPFDSPECTK 61 (62)
Q Consensus 19 ~~~l~~w~~~i~gp~~t~y~gg~f~~--~i~~~~~yP~~pP~v~F 61 (62)
..++..|.++|. ..|+|++|.+ .|-||++||++||.|.+
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~vfv 90 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPICFV 90 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEEEE
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEEEE
Confidence 568999999997 6799999995 89999999999999843
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.42 E-value=0.0083 Score=32.69 Aligned_cols=22 Identities=27% Similarity=0.534 Sum_probs=19.5
Q ss_pred CEEEEEEEcCCCCCCCCCeEEe
Q psy17588 40 EEFQLQFKFGPKYPFDSPECTK 61 (62)
Q Consensus 40 g~f~~~i~~~~~yP~~pP~v~F 61 (62)
-.+.|.+.+|.+||.++|.+..
T Consensus 55 ~~~~L~v~~p~~YP~~~P~i~l 76 (128)
T 2ebm_A 55 VQTTLKFTYSEKYPDEAPLYEI 76 (128)
T ss_dssp CBEEEEEECCSSTTTSCCEEEE
T ss_pred eeEEEEEEeCCCCCCCCceEEE
Confidence 4788999999999999999864
No 57
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.19 E-value=0.027 Score=31.00 Aligned_cols=39 Identities=21% Similarity=0.444 Sum_probs=27.3
Q ss_pred cccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEe
Q psy17588 22 LNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTK 61 (62)
Q Consensus 22 l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F 61 (62)
...+.+.|....+ .=..-...|.+.+|.+||.++|.|..
T Consensus 45 ~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l 83 (138)
T 2yz0_A 45 QIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEF 83 (138)
T ss_dssp CSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEE
T ss_pred CcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEE
Confidence 4567777763222 11124788999999999999999864
No 58
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.61 E-value=0.036 Score=30.14 Aligned_cols=39 Identities=21% Similarity=0.234 Sum_probs=26.3
Q ss_pred cccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEEe
Q psy17588 22 LNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECTK 61 (62)
Q Consensus 22 l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~F 61 (62)
...+.+.|...... =..-.+.|.+.+|.+||..+|.|..
T Consensus 39 ~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l 77 (128)
T 2ebk_A 39 GTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISI 77 (128)
T ss_dssp CEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCC
T ss_pred CCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEE
Confidence 34666666632210 0123789999999999999998753
No 59
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=95.32 E-value=0.017 Score=31.41 Aligned_cols=22 Identities=23% Similarity=0.496 Sum_probs=19.3
Q ss_pred CEEEEEEEcCCCCCCCCCeEEe
Q psy17588 40 EEFQLQFKFGPKYPFDSPECTK 61 (62)
Q Consensus 40 g~f~~~i~~~~~yP~~pP~v~F 61 (62)
-.+.|.+.+|.+||..+|.|..
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~ 80 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISI 80 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEE
Confidence 4788999999999999998864
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.15 E-value=0.016 Score=31.82 Aligned_cols=22 Identities=32% Similarity=0.466 Sum_probs=19.3
Q ss_pred CEEEEEEEcCCCCCCCCCeEEe
Q psy17588 40 EEFQLQFKFGPKYPFDSPECTK 61 (62)
Q Consensus 40 g~f~~~i~~~~~yP~~pP~v~F 61 (62)
-.+.|.|.+|.+||.++|.|..
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l 84 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDL 84 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEE
T ss_pred eEEEEEEECCCCCCCCCCcEEE
Confidence 3689999999999999998764
No 61
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.51 E-value=0.04 Score=31.20 Aligned_cols=20 Identities=20% Similarity=0.373 Sum_probs=18.6
Q ss_pred EEEEEEEcCCCCCCCCCeEE
Q psy17588 41 EFQLQFKFGPKYPFDSPECT 60 (62)
Q Consensus 41 ~f~~~i~~~~~yP~~pP~v~ 60 (62)
.+.|+|.+|.+||..+|.|.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~ 95 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLF 95 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEE
T ss_pred eEEEEEEcCCCCCCCCCcEE
Confidence 79999999999999999875
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=94.35 E-value=0.03 Score=31.47 Aligned_cols=21 Identities=38% Similarity=0.396 Sum_probs=18.7
Q ss_pred EEEEEEEcCCCCCCCCCeEEe
Q psy17588 41 EFQLQFKFGPKYPFDSPECTK 61 (62)
Q Consensus 41 ~f~~~i~~~~~yP~~pP~v~F 61 (62)
.+.|.+.+|.+||..+|.+..
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l 94 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITV 94 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEE
T ss_pred eEEEEEECCCCCCCCCCeEEE
Confidence 688999999999999998764
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=83.13 E-value=1.9 Score=25.34 Aligned_cols=37 Identities=24% Similarity=0.493 Sum_probs=29.6
Q ss_pred CCCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCeEE
Q psy17588 19 EQNLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKYPFDSPECT 60 (62)
Q Consensus 19 ~~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~yP~~pP~v~ 60 (62)
++++...++.+..- .|..-.++|.++.+||.++|.+.
T Consensus 22 d~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~ 58 (186)
T 3zqs_A 22 DTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYF 58 (186)
T ss_dssp CTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEE
T ss_pred cCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeE
Confidence 44677778877732 45889999999999999999875
No 64
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=74.75 E-value=3.9 Score=24.32 Aligned_cols=25 Identities=8% Similarity=-0.036 Sum_probs=22.1
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCeEEeC
Q psy17588 38 DGEEFQLQFKFGPKYPF-----DSPECTKK 62 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~-----~pP~v~F~ 62 (62)
+.|.|.|+-..|--||. .||.|+|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46899999999999998 89999873
No 65
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=58.08 E-value=7.8 Score=22.88 Aligned_cols=23 Identities=13% Similarity=0.011 Sum_probs=20.8
Q ss_pred CEEEEEEEcCCCCCCC-----CCeEEeC
Q psy17588 40 EEFQLQFKFGPKYPFD-----SPECTKK 62 (62)
Q Consensus 40 g~f~~~i~~~~~yP~~-----pP~v~F~ 62 (62)
|.|.|+-..|--||.. ||.|+|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8999999999999987 8999873
No 66
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=56.37 E-value=7.3 Score=23.67 Aligned_cols=25 Identities=4% Similarity=-0.039 Sum_probs=21.6
Q ss_pred CCCEEEEEEEcCCCCCC-------CCCeEEeC
Q psy17588 38 DGEEFQLQFKFGPKYPF-------DSPECTKK 62 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~-------~pP~v~F~ 62 (62)
+.|.|.|+-.+|--||. .||.|+|.
T Consensus 133 ~~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 133 SDGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 35899999999999996 78999873
No 67
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=54.83 E-value=8 Score=23.49 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=21.4
Q ss_pred CCCEEEEEEEcCCCCCC-------CCCeEEeC
Q psy17588 38 DGEEFQLQFKFGPKYPF-------DSPECTKK 62 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~-------~pP~v~F~ 62 (62)
+.|.|.|+-.+|--||. .||.|+|.
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 45899999999999984 79999873
No 68
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=52.65 E-value=21 Score=18.63 Aligned_cols=23 Identities=17% Similarity=0.306 Sum_probs=18.7
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEe
Q psy17588 38 DGEEFQLQFKFGPKYPFDSPECTK 61 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~~pP~v~F 61 (62)
.+..+...+.|+..|. .+|+|..
T Consensus 27 g~R~~~~~V~F~~~F~-~~P~V~v 49 (101)
T 2ccv_A 27 NTRELAKNITFASPYC-RPPVVLL 49 (101)
T ss_dssp SCEEEEEEEECSSCCS-SCCEEEE
T ss_pred cceEEEEEeEeCcccC-CCCEEEE
Confidence 3457889999999999 5999864
No 69
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=52.40 E-value=9.2 Score=24.14 Aligned_cols=17 Identities=6% Similarity=-0.015 Sum_probs=14.8
Q ss_pred CCCEEEEEEEcCCCCCC
Q psy17588 38 DGEEFQLQFKFGPKYPF 54 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~ 54 (62)
+.|.|.|+-..|-.||.
T Consensus 187 ~~G~y~F~TI~Pg~Y~i 203 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGC 203 (312)
T ss_dssp TTSEEEEEEECCCCEEC
T ss_pred CCceEEEEEECcCcccC
Confidence 46899999999999983
No 70
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=52.30 E-value=9.5 Score=24.05 Aligned_cols=25 Identities=4% Similarity=-0.053 Sum_probs=20.8
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEeC
Q psy17588 38 DGEEFQLQFKFGPKYP------------------FDSPECTKK 62 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP------------------~~pP~v~F~ 62 (62)
+.|.|.|+-..|--|| ..||.|+|.
T Consensus 183 ~~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 183 AEGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TTCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 4589999999999998 358888873
No 71
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=51.54 E-value=9.8 Score=23.81 Aligned_cols=17 Identities=12% Similarity=0.192 Sum_probs=15.0
Q ss_pred CCCEEEEEEEcCCCCCC
Q psy17588 38 DGEEFQLQFKFGPKYPF 54 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~ 54 (62)
+.|.|.|+-..|--||.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~ 199 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPI 199 (293)
T ss_dssp TTSEEEEEEECCCCEEC
T ss_pred CCceEEEEEECCCcccC
Confidence 46899999999999984
No 72
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=51.20 E-value=10 Score=23.74 Aligned_cols=25 Identities=16% Similarity=0.179 Sum_probs=21.0
Q ss_pred CCCEEEEEEEcCCCCCC------------------CCCeEEeC
Q psy17588 38 DGEEFQLQFKFGPKYPF------------------DSPECTKK 62 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~------------------~pP~v~F~ 62 (62)
+.|.|.|+-.+|--||. .||.|+|.
T Consensus 180 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 180 NDGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 45899999999999994 58888873
No 73
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=49.81 E-value=15 Score=22.61 Aligned_cols=17 Identities=6% Similarity=0.268 Sum_probs=13.5
Q ss_pred CCCEEEEEEEcCCCCCC
Q psy17588 38 DGEEFQLQFKFGPKYPF 54 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~ 54 (62)
+.|.|.|+-..|--||.
T Consensus 150 ~~G~y~F~TI~P~~Ypi 166 (260)
T 3th1_A 150 SQGNYRVRTTMPVPYQI 166 (260)
T ss_dssp TTSEEEEEEECCCCEEC
T ss_pred CCCEEEEEEECCCCCCC
Confidence 35899999999977753
No 74
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=49.03 E-value=11 Score=22.99 Aligned_cols=17 Identities=18% Similarity=0.342 Sum_probs=14.4
Q ss_pred CCCEEEEEEEcCCCCCC
Q psy17588 38 DGEEFQLQFKFGPKYPF 54 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~ 54 (62)
+.|.|.|+-..|-.||.
T Consensus 153 ~~G~y~F~TI~Pg~Y~~ 169 (254)
T 2boy_A 153 ENGRFTLRTIVPAPYEI 169 (254)
T ss_dssp TTSEEEEEEECCCCEEC
T ss_pred CCceEEEEEECCccccC
Confidence 35899999999999974
No 75
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=47.71 E-value=12 Score=23.64 Aligned_cols=25 Identities=4% Similarity=0.117 Sum_probs=20.6
Q ss_pred CCCEEEEEEEcCCCCCC------------------CCCeEEeC
Q psy17588 38 DGEEFQLQFKFGPKYPF------------------DSPECTKK 62 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~------------------~pP~v~F~ 62 (62)
+.|.|.|+-..|--||. .||.|+|.
T Consensus 186 ~~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 186 ENGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CCceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 35899999999999983 58888873
No 76
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=45.88 E-value=12 Score=23.34 Aligned_cols=16 Identities=6% Similarity=0.173 Sum_probs=13.9
Q ss_pred CCEEEEEEEcCCCCCC
Q psy17588 39 GEEFQLQFKFGPKYPF 54 (62)
Q Consensus 39 gg~f~~~i~~~~~yP~ 54 (62)
.|.|.|+-.+|--||.
T Consensus 183 dG~y~F~TI~Pg~Yp~ 198 (280)
T 3hhy_A 183 EGRYEITTIQPAPYQI 198 (280)
T ss_dssp TSEEEEEEECCCCEEC
T ss_pred CceEEEEEECCcCcCC
Confidence 4899999999988873
No 77
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=41.02 E-value=21 Score=21.92 Aligned_cols=17 Identities=6% Similarity=0.086 Sum_probs=14.6
Q ss_pred CCCEEEEEEEcCCCCCC
Q psy17588 38 DGEEFQLQFKFGPKYPF 54 (62)
Q Consensus 38 ~gg~f~~~i~~~~~yP~ 54 (62)
+.|.|.|+-.+|--||.
T Consensus 155 ~~G~y~F~TI~Pg~Yp~ 171 (257)
T 3o5u_A 155 EDGSIEFHSIRPVPYEI 171 (257)
T ss_dssp TTSEEEEEEECCCCEEC
T ss_pred CCceEEEEEECCCCcCC
Confidence 45899999999999974
No 78
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=36.13 E-value=26 Score=16.62 Aligned_cols=11 Identities=27% Similarity=0.703 Sum_probs=8.4
Q ss_pred EEEEcCCCCCC
Q psy17588 44 LQFKFGPKYPF 54 (62)
Q Consensus 44 ~~i~~~~~yP~ 54 (62)
++-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 45678999984
No 79
>2rp4_A Transcription factor P53; DMP53, oligomerization domain, tetramerizaiton domain, nucleus; NMR {Drosophila melanogaster}
Probab=35.95 E-value=24 Score=17.74 Aligned_cols=24 Identities=8% Similarity=0.321 Sum_probs=18.2
Q ss_pred CCcccEEEEEECCCCCCCCCCEEEEEEEcCC
Q psy17588 20 QNLNLWTIHMKGAEGTLYDGEEFQLQFKFGP 50 (62)
Q Consensus 20 ~~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~ 50 (62)
.....|.+.-+ .+|.|+|.|++|+
T Consensus 7 ~~p~dW~VsRt-------~dGdYrL~itcpk 30 (76)
T 2rp4_A 7 DSAAEWNVSRT-------PDGDYRLAITCPN 30 (76)
T ss_dssp CSSCCCEEECC-------TTTBEEEEEEESC
T ss_pred CCCccceeeec-------cCCceEEEEEeCc
Confidence 35678988633 4689999999986
No 80
>4b0y_A Heme-binding protein 2; apoptosis; 3.50A {Homo sapiens}
Probab=29.50 E-value=40 Score=20.13 Aligned_cols=27 Identities=11% Similarity=0.304 Sum_probs=19.9
Q ss_pred CCCCCCCCCEEEEEEEcCCCCCCCCCe
Q psy17588 32 AEGTLYDGEEFQLQFKFGPKYPFDSPE 58 (62)
Q Consensus 32 p~~t~y~gg~f~~~i~~~~~yP~~pP~ 58 (62)
|..++..++.|.+.+.+|.+|-..||+
T Consensus 117 p~~~~~~~~~~tvsF~lP~~~q~~pP~ 143 (227)
T 4b0y_A 117 PGSGPFSESTITISLYIPSEQQFDPPR 143 (227)
T ss_dssp CCC--CCCEEEEEEEECCGGGSSSCCC
T ss_pred cCCCcccCceEEEEEEcChhhccCCCC
Confidence 455567778999999999998766663
No 81
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=28.12 E-value=99 Score=18.41 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=23.6
Q ss_pred EEEECCCCCCCCC---CEEEEEEEcCCCCCCCCCeEE
Q psy17588 27 IHMKGAEGTLYDG---EEFQLQFKFGPKYPFDSPECT 60 (62)
Q Consensus 27 ~~i~gp~~t~y~g---g~f~~~i~~~~~yP~~pP~v~ 60 (62)
..|.-.+...|.| ..+...+.|+..|. .+|+|.
T Consensus 167 G~i~t~d~~lwsG~g~r~~~~~V~F~~~F~-~~P~V~ 202 (257)
T 2vm9_A 167 GEVSIGDRSLNSGTGSRTIVRHVKFPVEFL-SVPIVS 202 (257)
T ss_dssp EEEECCSSTTSSCSSSEEEEEEEECSSCCS-SCCEEE
T ss_pred CceEcCCcccccCCCCccEEEEEeCCCccC-CCCEEE
Confidence 3444445556655 57788999999998 488876
No 82
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=27.58 E-value=76 Score=16.93 Aligned_cols=26 Identities=27% Similarity=0.485 Sum_probs=22.7
Q ss_pred EEEEEECCCCCCCCCCEEEEEEEcCC
Q psy17588 25 WTIHMKGAEGTLYDGEEFQLQFKFGP 50 (62)
Q Consensus 25 w~~~i~gp~~t~y~gg~f~~~i~~~~ 50 (62)
.|+.+.|....+=+|..+.+++.|-+
T Consensus 82 ~HvML~gl~~~l~~G~~v~ltL~Fe~ 107 (120)
T 2k6w_A 82 YHFMLLGLKRPLKAGEEVELDLLFAG 107 (120)
T ss_dssp EEEEEEEESSCBCTTCEEEEEEEETT
T ss_pred eEEEEeCCCCCCCCCCEEEEEEEECC
Confidence 68888898888889999999999965
No 83
>2kmc_A Fermitin family homolog 1; kindlin, cytoskeleton, integrin, N-terminal, talin, cell adhesion, cell junction, cell membrane, cell projection; NMR {Mus musculus}
Probab=22.75 E-value=68 Score=17.04 Aligned_cols=26 Identities=8% Similarity=0.045 Sum_probs=17.9
Q ss_pred CCCCCCCCEEEEEEEcCCCCCCCCCe
Q psy17588 33 EGTLYDGEEFQLQFKFGPKYPFDSPE 58 (62)
Q Consensus 33 ~~t~y~gg~f~~~i~~~~~yP~~pP~ 58 (62)
.++-|..|.+.|+|.+.+..+.+++.
T Consensus 9 ~sg~~~d~SWeL~V~V~d~~~~~~~~ 34 (102)
T 2kmc_A 9 SSGDLTSASWELVVRVDHANGEQQTE 34 (102)
T ss_dssp SSSCCSCCCEEEEEEEECTTSSCEEE
T ss_pred ccCccccCcEEEEEEEecCCcccCcc
Confidence 34567788888888887776654443
No 84
>4guc_A Protein BA_2500; virulence, pathogenesis, vaccine candidate, center for struc genomics of infectious diseases, csgid, niaid; HET: PGE; 1.40A {Bacillus anthracis}
Probab=22.62 E-value=68 Score=17.53 Aligned_cols=32 Identities=16% Similarity=0.189 Sum_probs=23.9
Q ss_pred CcccEEEEEECCCCCCCCCCEEEEEEEcCCCC
Q psy17588 21 NLNLWTIHMKGAEGTLYDGEEFQLQFKFGPKY 52 (62)
Q Consensus 21 ~l~~w~~~i~gp~~t~y~gg~f~~~i~~~~~y 52 (62)
+..++.++..-|--+.|+.|.|-.-+.+..+|
T Consensus 79 ~~~~~~~~f~TpIT~vY~pGtYVAV~k~~~~y 110 (120)
T 4guc_A 79 GLKHNYGRFVTPITKAYNPGTYVAVMKLGENY 110 (120)
T ss_dssp CCCTTEEEEEEECCTTSCSEEEEEEEEETTEE
T ss_pred CCcCCeeEEEeecccccCCCcEEEEEEeCCeE
Confidence 34456666666777899999999888887665
No 85
>1x9l_A CUI-DR1885; copper binding protein, solution ST holo-form, structural proteomics in europe, spine, structur genomics; NMR {Deinococcus radiodurans} SCOP: b.2.10.1 PDB: 2jqa_A
Probab=21.83 E-value=85 Score=17.42 Aligned_cols=27 Identities=19% Similarity=0.201 Sum_probs=23.1
Q ss_pred EEEEEECCCCCCCCCCEEEEEEEcCCC
Q psy17588 25 WTIHMKGAEGTLYDGEEFQLQFKFGPK 51 (62)
Q Consensus 25 w~~~i~gp~~t~y~gg~f~~~i~~~~~ 51 (62)
.++.+.|.+..+=+|..+.+++.|-+.
T Consensus 107 ~HvML~gL~~~l~~G~~v~lTL~Fe~~ 133 (149)
T 1x9l_A 107 DHVMLMGLKRPLKVGETVNITLKATDG 133 (149)
T ss_dssp SEEEEEEECSCCCTTEEEEEEECBTTT
T ss_pred eEEEEeCCCCCCCCCCEEEEEEEECCC
Confidence 588888988888899999999999653
No 86
>1f53_A Yeast killer toxin-like protein; killer toxin-like protein,SKLP, crystallin family; NMR {Streptomyces SP} SCOP: b.11.1.4
Probab=21.60 E-value=27 Score=17.83 Aligned_cols=10 Identities=30% Similarity=0.727 Sum_probs=7.5
Q ss_pred CCCCCCCeEE
Q psy17588 51 KYPFDSPECT 60 (62)
Q Consensus 51 ~yP~~pP~v~ 60 (62)
.||..||+|.
T Consensus 70 t~Pn~Pp~V~ 79 (84)
T 1f53_A 70 TYPNRPPKVN 79 (84)
T ss_dssp CCSSSCCCCC
T ss_pred ecCCCCCccc
Confidence 5777888875
Done!