BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17590
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46
PE=1 SV=2
Length = 1031
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKEE 73
EAL +ISEYSEA IT+RG Y PPGK P EGERK++LAIES NELAV KAK EITRLIKEE
Sbjct: 953 EALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEE 1012
Query: 74 LIKLSSSAHQSINKSRYK 91
LI+L +S +Q NK RYK
Sbjct: 1013 LIRLQNS-YQPTNKGRYK 1029
>sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus GN=Ddx46
PE=1 SV=2
Length = 1032
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKEE 73
EAL +ISEYSEA IT+RG Y PPGK P EGERK++LAIES NELAV KAK EITRLIKEE
Sbjct: 954 EALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEE 1013
Query: 74 LIKLSSSAHQSINKSRYK 91
LI+L +S +Q NK RYK
Sbjct: 1014 LIRLQNS-YQPTNKGRYK 1030
>sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii GN=DDX46
PE=2 SV=1
Length = 1032
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKEE 73
EAL +ISEYSEA IT+RG Y PPGK P EGERK++LAIES NELAV KAK EITRLIKEE
Sbjct: 954 EALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEE 1013
Query: 74 LIKLSSSAHQSINKSRYK 91
LI+L +S +Q NK RYK
Sbjct: 1014 LIRLQNS-YQPTNKGRYK 1030
>sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus
GN=Ddx46 PE=1 SV=1
Length = 1032
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKEE 73
EAL +ISEYSEA IT+RG Y PPGK P EGERK++LAIES NELAV KAK EITRLIKEE
Sbjct: 954 EALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEE 1013
Query: 74 LIKLSSSAHQSINKSRYK 91
LI+L +S +Q NK RYK
Sbjct: 1014 LIRLQNS-YQPTNKGRYK 1030
>sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio GN=ddx46
PE=2 SV=1
Length = 1018
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKEE 73
EAL +I EYSEA IT+RG Y PPGK P EGERK++LAIES NELAV KAK EITRLIKEE
Sbjct: 940 EALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEE 999
Query: 74 LIKLSSSAHQSINKSRYK 91
LI+L +S +Q +K RYK
Sbjct: 1000 LIRLQNS-YQPTSKGRYK 1016
>sp|Q2HAD8|PRP5_CHAGB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC
6347 / NRRL 1970) GN=PRP5 PE=3 SV=1
Length = 1064
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEG-ERKLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G Y PPGK PP G + KL++ IE ELAV KA E+TRL++E
Sbjct: 986 VAKILEATSTSITTKGNYYPPGKEPPSGSDPKLYILIEGDTELAVGKALSELTRLLREGT 1045
Query: 75 IKLSSSAHQSINKSRY 90
I + + ++ RY
Sbjct: 1046 IAAADAESRAPASGRY 1061
>sp|Q0J7Y8|RH45_ORYSJ DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp.
japonica GN=Os08g0154200 PE=3 SV=2
Length = 947
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKE 72
E L I +++EA IT RG +IP GK ERKL+L IE EL+V KAK E+ R++++
Sbjct: 813 ETLGPIQDWTEAAITTRGTFIPQGKIVGANERKLYLFIEGPTELSVKKAKSELKRVLED 871
>sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana
GN=RH42 PE=1 SV=2
Length = 1166
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKE 72
E L ISE++ A IT RG + P G+ P GERKL+L IE +E +V AK E+ R++++
Sbjct: 1088 ETLGPISEWTGAAITTRGQFYPTGRIPGPGERKLYLFIEGPSEKSVKHAKAELKRVLED 1146
>sp|A4RN46|PRP5_MAGO7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=PRP5
PE=3 SV=1
Length = 1012
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEG-ERKLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G Y PPGK+PP G + KL++ IE EL V A E+TRL+KE
Sbjct: 934 VAKILEATGTSITTKGNYYPPGKDPPAGADPKLYILIEGDTELVVGNALSELTRLLKEGT 993
Query: 75 IKLSSSAHQSINKSRY 90
+ + + ++ RY
Sbjct: 994 MAAADAESRAPASGRY 1009
>sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp.
japonica GN=Os08g0159900 PE=2 SV=1
Length = 1049
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKE 72
E L I E++ A IT RG + P GK ERKL+L IE EL+V KAK E+ R++++
Sbjct: 971 ETLGPIQEWTGAAITTRGTFFPQGKIVGANERKLYLFIEGPTELSVKKAKAELKRVLED 1029
>sp|Q1DHB2|PRP5_COCIM Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides
immitis (strain RS) GN=PRP5 PE=3 SV=1
Length = 1197
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNP-PEGERKLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G Y PPGK P P KL++ +E EL V+ A E+ RL+KE
Sbjct: 1119 VAKILEATGTSITTKGSYYPPGKEPGPNENPKLYILVEGDTELVVTNAMRELMRLLKEGT 1178
Query: 75 IKLSSSAHQSINKSRY 90
I + S ++ RY
Sbjct: 1179 IAAADSEARAPASGRY 1194
>sp|Q9SF41|RH45_ARATH DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana
GN=RH45 PE=2 SV=1
Length = 989
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKE 72
E L ISE+S A IT RG + G+ P ERKL+L +E E++V AK E+ R++++
Sbjct: 911 ETLGPISEWSGASITTRGKFYEAGRIPGPEERKLYLFVEGPTEISVKTAKAELKRVLED 969
>sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helicase prp11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp11 PE=3 SV=1
Length = 1014
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKE 72
+ ++E + IT +G + PGKNP GE KL+L IE +EL V++A E+ RL+ E
Sbjct: 937 IVHVTELTGTSITTKGNFYLPGKNPEPGEEKLYLWIEGPSELVVNRAITELRRLLLE 993
>sp|A1CQA9|PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=prp5 PE=3 SV=1
Length = 1192
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNP-PEGERKLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G + PPGK P P KL++ +E ELAV+ A E+ RL+KE
Sbjct: 1114 VAKILEATGTSITTKGSFYPPGKVPGPNENAKLYILVEGETELAVTNAMRELMRLLKEGT 1173
Query: 75 IKLSSSAHQSINKSRYKGV 93
I + S ++ RY V
Sbjct: 1174 IAAADSDARAPVGGRYNVV 1192
>sp|Q4WT99|PRP5_ASPFU Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=prp5 PE=3 SV=1
Length = 1211
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEGER-KLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G + P GK P GE KL++ +E ELAV+ A E+ RL+KE
Sbjct: 1133 VAKILEATGTSITTKGSFYPAGKEPGPGENPKLYILVEGETELAVTNAMRELMRLLKEGT 1192
Query: 75 IKLSSSAHQSINKSRYKGV 93
+ + S ++ RY V
Sbjct: 1193 LAAADSDARAPVGGRYNVV 1211
>sp|A1D373|PRP5_NEOFI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL
181) GN=prp5 PE=3 SV=1
Length = 1193
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEGER-KLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G + P GK P GE KL++ +E ELAV+ A E+ RL+KE
Sbjct: 1115 VAKILEATGTSITTKGSFYPAGKEPGPGENPKLYILVEGETELAVTNAMRELMRLLKEGT 1174
Query: 75 IKLSSSAHQSINKSRYKGV 93
+ + S ++ RY V
Sbjct: 1175 LAAADSDARAPVGGRYNVV 1193
>sp|Q0D1K3|PRP5_ASPTN Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=prp5 PE=3 SV=1
Length = 1181
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEGER-KLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G + P GK P GE KL++ +E ELAV+ A E+ RL+KE
Sbjct: 1103 VAKILEATGTSITTKGSFYPTGKEPGPGENPKLYILVEGETELAVTNAMRELMRLLKEGT 1162
Query: 75 IKLSSSAHQSINKSRYKGV 93
+ + S ++ RY V
Sbjct: 1163 LAAADSDARAPVGGRYNVV 1181
>sp|A2QQA8|PRP5_ASPNC Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=prp5 PE=3 SV=2
Length = 1180
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEGER-KLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G + P GK P GE KL++ +E ELAV+ A E+ RL+KE
Sbjct: 1102 VAKILEATGTSITTKGSFYPTGKVPGPGENPKLYILVEGETELAVTNAMRELMRLLKEGT 1161
Query: 75 IKLSSSAHQSINKSRYKGV 93
I + S ++ RY V
Sbjct: 1162 IAAADSDARAPVGGRYNVV 1180
>sp|Q5BDW4|PRP5_EMENI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL
194 / M139) GN=prp5 PE=3 SV=1
Length = 1173
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEGER-KLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G + P GK P GE KL++ +E EL+V+ A E+ RL+KE
Sbjct: 1095 VAKILEATGTSITTKGSFYPAGKEPGPGENPKLYILVEGETELSVTNAMRELMRLLKEGT 1154
Query: 75 IKLSSSAHQSINKSRY 90
I S ++ RY
Sbjct: 1155 IAAVDSESRAPASGRY 1170
>sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella
zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL
31084) GN=PRP5 PE=3 SV=2
Length = 1207
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEG-ERKLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G + P GK P G E KL++ IE E+ VS A E+TRL++E
Sbjct: 1129 VAKILEATGTSITTKGNFYPAGKEVPAGAEPKLYILIEGDTEVVVSSALTELTRLLREGT 1188
Query: 75 IKLSSSAHQSINKSRY 90
I + ++ RY
Sbjct: 1189 IAAVDADSRAPASGRY 1204
>sp|Q7SH33|PRP5_NEUCR Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM
1257 / FGSC 987) GN=prp-5 PE=3 SV=1
Length = 1194
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNP-PEGERKLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G Y PGK P P E KL++ IE E+ V A E+TRL++E
Sbjct: 1116 VAKILEATGTSITTKGNYYAPGKEPGPGQEPKLYILIEGDTEVVVGNALSELTRLLREGT 1175
Query: 75 IKLSSSAHQSINKSRY 90
+ + + ++ RY
Sbjct: 1176 MAAADAESRAPASGRY 1191
>sp|P0CQ98|PRP5_CRYNJ Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=PRP5 PE=3 SV=1
Length = 1072
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPP-EGERKLFLAIESTNELAVSKAKVEITRLIKE 72
E + + E S A IT+RG + PPG+ P GE KL L IES +E+ V A EI R++ E
Sbjct: 992 EQMTLLQEVSGASITMRGRFYPPGEEPALGGEPKLSLLIESNDEMRVRAAVEEIRRVLVE 1051
>sp|P0CQ99|PRP5_CRYNB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=PRP5 PE=3 SV=1
Length = 1072
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPP-EGERKLFLAIESTNELAVSKAKVEITRLIKE 72
E + + E S A IT+RG + PPG+ P GE KL L IES +E+ V A EI R++ E
Sbjct: 992 EQMTLLQEVSGASITMRGRFYPPGEEPALGGEPKLSLLIESNDEMRVRAAVEEIRRVLVE 1051
>sp|Q2U2J6|PRP5_ASPOR Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=prp5 PE=3 SV=1
Length = 1186
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEGER-KLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G + GK P GE KL++ +E EL+V+ A E+ RL+KE
Sbjct: 1108 VAKILEATGTSITTKGSFYATGKEPGPGENPKLYILVEGETELSVTNAMRELMRLLKEGT 1167
Query: 75 IKLSSSAHQSINKSRY 90
I + S ++ RY
Sbjct: 1168 IAAADSDARAPVGGRY 1183
>sp|Q6CCZ1|PRP5_YARLI Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PRP5 PE=3 SV=1
Length = 974
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 27 ITVRGIYIPPGKNP-PEGERKLFLAIESTNELAVSKAKVEITRLIKEELIK 76
IT +G Y PPG+ P P+ E KLF+ IE T+E AV A E++ L+ L+K
Sbjct: 918 ITAKGEYYPPGRIPGPKDEPKLFILIEGTSERAVKLAHHELSELLVSGLVK 968
>sp|Q553B1|DDX46_DICDI ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum GN=helB1
PE=2 SV=1
Length = 1151
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 33 YIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKEELIKLSSSAHQSINK 87
+ PP K P GERKL+L IE ++ +V AK +I +++ E S HQS K
Sbjct: 1098 FFPPNKIPAPGERKLYLYIEGPSDASVKNAKSDIKKILDE-----VQSTHQSTGK 1147
>sp|Q0UN57|PRP5_PHANO Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Phaeosphaeria
nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
GN=PRP5 PE=3 SV=2
Length = 1184
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEGE-RKLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I + + IT +G + PGK P E + KL++ +E E V++A +E+TRL+ +
Sbjct: 1105 VAKILDATGVSITTKGNFYGPGKEPGETDLPKLYILVEGDTEGVVTQAMLELTRLLTDAT 1164
Query: 75 IKLSSSAHQSINKSRY 90
+ +A RY
Sbjct: 1165 VAAEEAASTRGPTGRY 1180
>sp|A7ENE0|PRP5_SCLS1 Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp5
PE=3 SV=1
Length = 1114
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKN-PPEGERKLFLAIESTNELAVSKAKVEITRLIKEEL 74
+A+I E + IT +G + P GK G+ KL++ +E E+ V+ A E+ RL+KE
Sbjct: 1036 VAKILEATGTSITTKGSFYPAGKEVQAGGDPKLYILVEGDTEVVVTNAMRELMRLLKEGT 1095
Query: 75 IKLSSSAHQSINKSRY 90
+ + + ++ RY
Sbjct: 1096 MAAADAEGRAPASGRY 1111
>sp|A6RW79|PRP5_BOTFB Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia
fuckeliana (strain B05.10) GN=prp5 PE=3 SV=1
Length = 1151
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 16 LAQISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKEELI 75
+A+I E + IT +G + P GK + + KL++ +E E+ V+ A E+ RL+KE +
Sbjct: 1075 VAKILEATGTSITTKGSFYPAGKEV-QADPKLYILVEGDTEVVVTNAMRELMRLLKEGTM 1133
Query: 76 KLSSSAHQSINKSRY 90
+ + ++ RY
Sbjct: 1134 AAADAEGRAPVGGRY 1148
>sp|A5E058|PRP5_LODEL Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=PRP5 PE=3 SV=1
Length = 994
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 14 EALAQISEYSEAGITVRGIYIPPG--KNPPEGERKLFLAIESTNELAVSKAKVEITRLIK 71
E+L++I E S+ IT RG + PP + P + KL+L IE AV +A V LI+
Sbjct: 915 ESLSKIIEASKTSITTRGQFYPPQSKQTPTNDQPKLYLLIEGLTRKAVEEAAV----LIR 970
Query: 72 EELIK 76
+++++
Sbjct: 971 DKMLQ 975
>sp|Q5ADL0|PRP5_CANAL Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=PRP5 PE=3
SV=1
Length = 884
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 11/70 (15%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGER-------KLFLAIESTNELAVSKAKVEI 66
E+L++I + S IT RG Y PPG P ++ KL+L +E +V++A I
Sbjct: 800 ESLSKIIDESRTSITTRGQYYPPGSKPLSNDQERNGSLAKLYLLVEGLTLQSVTEA---I 856
Query: 67 TRLIKEELIK 76
T LIK+++++
Sbjct: 857 T-LIKKKMLE 865
>sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=PRP5 PE=3 SV=1
Length = 1156
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 14 EALAQISEYSEAGITVRGIYIPPGKNPPEGER-KLFLAIESTNELAVSKAKVEITRLIKE 72
E + + E + A IT +G++ G P GE KL L IES + V A EI RL+ E
Sbjct: 1075 ETMRHLIESTGASITNKGVFYKEGTEPQPGEPPKLQLLIESNTKSMVEDAVREIQRLLVE 1134
>sp|Q9LIA4|RIK_ARATH Protein RIK OS=Arabidopsis thaliana GN=RIK PE=1 SV=2
Length = 578
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 11/68 (16%)
Query: 18 QISEYSEAGITVRGIYIPPGKNPPEGERKLFLAIESTNE----------LAVSKAKVEIT 67
I + A + RG Y PP PP+GE+ L+L I + + LAV +A I
Sbjct: 113 DIQRSTGAVVITRGKYRPPNA-PPDGEKPLYLHISAAAQLQLKETTERILAVDRAAAMIE 171
Query: 68 RLIKEELI 75
++K++ I
Sbjct: 172 EMMKQKSI 179
>sp|Q6XKE6|POLG_PVCV2 Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn)
PE=3 SV=1
Length = 2180
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 19 ISEYSEAG------ITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKE 72
+S +S+ G I R + +P G P G+ + + ++ N LA ++ I R +KE
Sbjct: 501 LSSFSKDGADHTPKIPKRNVVLPSGAKDPTGDLEATVNWQTENALAQNRMLTTIDRTLKE 560
Query: 73 ELIKLSSSAHQSINKSRYKGVGR 95
+ K+ + QS S+ +G+ R
Sbjct: 561 TVTKVDRVSDQS---SKNQGLIR 580
>sp|Q754U8|PRP5_ASHGO Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=PRP5 PE=3 SV=2
Length = 855
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 15 ALAQISEYSEAGITVRGIYIPPGKNP--PEGERKLFLAIESTNELAVSKA 62
L+ I + IT +G Y P G+ P P E +L+L +ES + +S A
Sbjct: 779 TLSSIKHETGCSITNKGRYYPSGQGPQGPSDEPRLYLLVESATDQDISLA 828
>sp|Q91DM0|POLG_PVCV1 Genome polyprotein OS=Petunia vein clearing virus (isolate
Shepherd) PE=3 SV=1
Length = 2179
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 19 ISEYSEAG------ITVRGIYIPPGKNPPEGERKLFLAIESTNELAVSKAKVEITRLIKE 72
+S +S+ G I R + +P G P G+ + + ++ N LA ++ I R +KE
Sbjct: 500 LSSFSKDGADHTPKIPKRNVVLPSGAKDPTGDLEATVNWQTENALAQNRMLTTIDRTLKE 559
Query: 73 ELIKLSSSAHQS 84
+ K+ QS
Sbjct: 560 TVTKVDRVTDQS 571
>sp|Q6FML5|PRP5_CANGA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=PRP5 PE=3 SV=1
Length = 816
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 27 ITVRGIYIPPGK--NPPEGERKLFLAIESTNELAV 59
IT+RG Y PP N E KL+L IE+T++ AV
Sbjct: 754 ITLRGRYYPPSNVTNDNNTEPKLYLLIEATDDKAV 788
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.132 0.350
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,938,302
Number of Sequences: 539616
Number of extensions: 1148844
Number of successful extensions: 2673
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 2618
Number of HSP's gapped (non-prelim): 69
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)